PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 SUPERFAMILY SSF140319 2 64 4.18E-25 T 26-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.5E-33 T 26-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 Gene3D G3DSA:1.10.10.600 1 66 5.8E-32 T 26-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 PANTHER PTHR37532 1 66 3.2E-31 T 26-04-2016 PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 2.3E-30 T 26-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PAM18_RS05735 27c568a6a4c043ae8a673f4938cd95c9 66 PIRSF PIRSF039003 3 66 4.2E-33 T 26-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.357.10 2 202 7.2E-38 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.2E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.2E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 7.9E-17 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 PANTHER PTHR30055:SF51 7 200 5.8E-112 T 26-04-2016 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF46689 11 89 2.19E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF48498 97 201 2.25E-8 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS18370 0d76f4527097a54f6f5bb51e313c81d3 204 PANTHER PTHR30055 7 200 5.8E-112 T 26-04-2016 PAM18_RS22240 16d4ae1bd59b3b57d56b31183512e730 403 SUPERFAMILY SSF53067 19 144 6.6E-9 T 26-04-2016 PAM18_RS22240 16d4ae1bd59b3b57d56b31183512e730 403 Pfam PF12693 GspL periplasmic domain 229 402 2.4E-44 T 26-04-2016 IPR025691 GspL periplasmic domain PAM18_RS22240 16d4ae1bd59b3b57d56b31183512e730 403 Pfam PF05134 Type II secretion system (T2SS), protein L 39 169 1.3E-6 T 26-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PAM18_RS16460 1277989049c6c8f9e4fee4326eb78c5b 236 PANTHER PTHR23029 4 225 1.9E-21 T 26-04-2016 PAM18_RS16460 1277989049c6c8f9e4fee4326eb78c5b 236 Gene3D G3DSA:3.40.50.1240 4 225 5.1E-33 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS16460 1277989049c6c8f9e4fee4326eb78c5b 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 219 1.1E-22 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS16460 1277989049c6c8f9e4fee4326eb78c5b 236 SMART SM00855 3 179 6.4E-12 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS16460 1277989049c6c8f9e4fee4326eb78c5b 236 SUPERFAMILY SSF53254 4 226 2.08E-38 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 237 288 9.0E-8 T 26-04-2016 IPR000644 CBS domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 304 353 8.1E-6 T 26-04-2016 IPR000644 CBS domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 239 288 1.6E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 305 353 0.1 T 26-04-2016 IPR000644 CBS domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF54631 224 363 2.4E-27 T 26-04-2016 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF56176 367 445 7.09E-15 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.30.465.10 361 445 2.7E-18 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF03471 Transporter associated domain 372 444 8.9E-17 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 PANTHER PTHR22777 19 446 2.3E-182 T 26-04-2016 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF01595 Domain of unknown function DUF21 21 209 5.9E-51 T 26-04-2016 IPR002550 Domain of unknown function DUF21 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 SMART SM01091 368 446 2.7E-16 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.10.580.10 221 360 1.2E-19 T 26-04-2016 PAM18_RS28005 22d459e575a24d58ebda4e106409c6a8 446 PANTHER PTHR22777:SF18 19 446 2.3E-182 T 26-04-2016 PAM18_RS09040 eb943573af4cf04775682d8975416257 186 PIRSF PIRSF000232 1 186 1.6E-66 T 26-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PAM18_RS09040 eb943573af4cf04775682d8975416257 186 Pfam PF00881 Nitroreductase family 9 163 8.8E-24 T 26-04-2016 IPR029479 Nitroreductase PAM18_RS09040 eb943573af4cf04775682d8975416257 186 Gene3D G3DSA:3.40.109.10 1 182 3.0E-38 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS09040 eb943573af4cf04775682d8975416257 186 PANTHER PTHR23026 1 184 1.1E-81 T 26-04-2016 PAM18_RS09040 eb943573af4cf04775682d8975416257 186 PANTHER PTHR23026:SF107 1 184 1.1E-81 T 26-04-2016 PAM18_RS09040 eb943573af4cf04775682d8975416257 186 SUPERFAMILY SSF55469 1 182 1.7E-38 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 SUPERFAMILY SSF82689 700 792 4.18E-14 T 26-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 Gene3D G3DSA:2.30.30.60 641 690 1.8E-16 T 26-04-2016 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 Pfam PF12607 Protein of unknown function (DUF3772) 140 200 4.2E-19 T 26-04-2016 IPR022249 Domain of unknown function DUF3772 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 PANTHER PTHR30347 46 807 3.4E-276 T 26-04-2016 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 SUPERFAMILY SSF82861 540 624 3.92E-13 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 Gene3D G3DSA:3.30.70.100 707 780 6.8E-11 T 26-04-2016 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 SUPERFAMILY SSF50182 626 691 6.21E-16 T 26-04-2016 IPR010920 LSM domain PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 Pfam PF00924 Mechanosensitive ion channel 584 781 4.2E-42 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS19040 e41ba65dee040936f390b598be241e62 807 PANTHER PTHR30347:SF3 46 807 3.4E-276 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 SMART SM00062 35 259 2.2E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 SUPERFAMILY SSF53850 1 258 1.71E-67 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 PANTHER PTHR18966 15 261 2.4E-92 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 SMART SM00079 35 258 1.6E-5 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 PANTHER PTHR18966:SF152 15 261 2.4E-92 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 219 258 3.1E-40 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 32 112 3.1E-40 T 26-04-2016 PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 257 4.6E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26545 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 113 218 4.2E-16 T 26-04-2016 PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 PANTHER PTHR30346:SF15 32 328 4.0E-70 T 26-04-2016 PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 Pfam PF03466 LysR substrate binding domain 198 318 4.0E-7 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 36 92 1.7E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 PANTHER PTHR30346 32 328 4.0E-70 T 26-04-2016 PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 SUPERFAMILY SSF46785 33 112 1.02E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 SUPERFAMILY SSF53850 116 322 2.17E-10 T 26-04-2016 PAM18_RS22150 1ad0b66bedab07765eb060528a96a1de 328 Gene3D G3DSA:1.10.10.10 34 107 1.5E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 PANTHER PTHR10245:SF20 4 176 1.9E-37 T 26-04-2016 PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 Gene3D G3DSA:1.10.260.40 3 52 1.5E-21 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 SUPERFAMILY SSF47413 3 65 4.56E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 Pfam PF07883 Cupin domain 118 174 1.2E-13 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 Gene3D G3DSA:2.60.120.10 53 175 2.6E-17 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 Pfam PF01381 Helix-turn-helix 5 59 1.5E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 SUPERFAMILY SSF51182 68 175 7.74E-24 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 PANTHER PTHR10245 4 176 1.9E-37 T 26-04-2016 PAM18_RS01115 2cc00f1c90a5d985c4a3aac4884ef8cb 179 SMART SM00530 4 59 2.2E-17 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS03675 061e0206a3e5250dceb70619a6b8ac52 501 PANTHER PTHR34219 1 494 4.3E-154 T 26-04-2016 PAM18_RS03675 061e0206a3e5250dceb70619a6b8ac52 501 PANTHER PTHR34219:SF3 1 494 4.3E-154 T 26-04-2016 PAM18_RS03675 061e0206a3e5250dceb70619a6b8ac52 501 Pfam PF03929 PepSY-associated TM region 9 360 2.6E-36 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 SUPERFAMILY SSF55021 269 363 2.98E-13 T 26-04-2016 PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 Pfam PF09383 NIL domain 288 358 8.0E-12 T 26-04-2016 IPR018449 NIL domain PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 PANTHER PTHR24220 27 265 5.3E-148 T 26-04-2016 PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 Pfam PF00005 ABC transporter 42 190 4.6E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 PANTHER PTHR24220:SF186 27 265 5.3E-148 T 26-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 SMART SM00930 285 360 8.4E-13 T 26-04-2016 IPR018449 NIL domain PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 Gene3D G3DSA:3.40.50.300 25 257 9.9E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 SMART SM00382 51 238 1.3E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 SUPERFAMILY SSF52540 26 260 2.08E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13840 eadb4da00d47ed9f32ab9baabd1e593d 366 Gene3D G3DSA:3.30.70.260 258 363 3.0E-17 T 26-04-2016 PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 Pfam PF06761 Intracellular multiplication and human macrophage-killing 518 792 2.4E-69 T 26-04-2016 IPR009612 ImcF-related PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 PANTHER PTHR36153 4 1175 0.0 T 26-04-2016 PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 SUPERFAMILY SSF52540 117 332 8.18E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 Pfam PF14331 ImcF-related N-terminal domain 198 452 1.1E-77 T 26-04-2016 IPR025743 ImcF-related, N-terminal domain PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 PANTHER PTHR36153:SF1 4 1175 0.0 T 26-04-2016 PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 26-04-2016 IPR017731 Type VI secretion system, IcmF PAM18_RS17315 f762f15e903f583211582944e4198c15 1175 Pfam PF06744 Type VI secretion protein IcmF C-terminal 923 1123 7.1E-57 T 26-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 5.8E-19 T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 179 5.7E-56 T 26-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 PANTHER PTHR14269:SF13 1 179 1.3E-94 T 26-04-2016 PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 PIRSF PIRSF000847 1 186 7.2E-51 T 26-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PAM18_RS12370 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 PANTHER PTHR14269 1 179 1.3E-94 T 26-04-2016 PAM18_RS07915 064c73e8df719c77f4a3bf1db3af6581 114 Gene3D G3DSA:2.60.120.10 25 112 2.4E-30 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS07915 064c73e8df719c77f4a3bf1db3af6581 114 SUPERFAMILY SSF51182 19 112 6.53E-17 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS07915 064c73e8df719c77f4a3bf1db3af6581 114 PANTHER PTHR33271 45 113 2.1E-25 T 26-04-2016 PAM18_RS07915 064c73e8df719c77f4a3bf1db3af6581 114 Pfam PF05899 Protein of unknown function (DUF861) 37 109 5.6E-28 T 26-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS04770 af6617d8ca9f504f51e0180847b56b40 381 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 28 376 9.5E-135 T 26-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PAM18_RS04770 af6617d8ca9f504f51e0180847b56b40 381 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 26-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PAM18_RS04770 af6617d8ca9f504f51e0180847b56b40 381 PANTHER PTHR30474:SF1 7 380 2.9E-170 T 26-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 PAM18_RS04770 af6617d8ca9f504f51e0180847b56b40 381 Pfam PF01098 Cell cycle protein 31 376 3.6E-113 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PAM18_RS04770 af6617d8ca9f504f51e0180847b56b40 381 PANTHER PTHR30474 7 380 2.9E-170 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 PANTHER PTHR30537:SF12 1 302 5.8E-200 T 26-04-2016 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:3.40.190.10 96 180 8.5E-26 T 26-04-2016 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 SUPERFAMILY SSF46785 10 116 2.83E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:1.10.10.10 11 86 3.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:3.40.190.10 181 263 1.3E-4 T 26-04-2016 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 PANTHER PTHR30537 1 302 5.8E-200 T 26-04-2016 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 SUPERFAMILY SSF53850 94 298 1.23E-42 T 26-04-2016 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 1.1E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09445 460a2bf7afd87ad8c40c7aec958f33f9 303 Pfam PF03466 LysR substrate binding domain 92 298 5.2E-41 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Gene3D G3DSA:1.10.287.130 365 426 5.1E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SMART SM00387 487 593 7.3E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PANTHER PTHR24423 5 45 1.2E-212 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PANTHER PTHR24423 254 593 1.2E-212 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Gene3D G3DSA:3.30.450.20 255 364 8.4E-13 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Gene3D G3DSA:3.30.565.10 427 593 3.5E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 489 592 2.3E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PANTHER PTHR24423:SF564 5 45 1.2E-212 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PANTHER PTHR24423:SF564 254 593 1.2E-212 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SUPERFAMILY SSF55874 430 593 3.67E-46 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Pfam PF00672 HAMP domain 174 242 1.2E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 441 1.1E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 5.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 5.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 592 5.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 5.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SMART SM00304 193 245 4.1E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SUPERFAMILY SSF158472 193 243 3.79E-8 T 26-04-2016 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB 40 157 2.6E-37 T 26-04-2016 IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 Pfam PF08448 PAS fold 262 368 8.6E-11 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SMART SM00091 256 321 1.2E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SMART SM00388 373 441 1.1E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SUPERFAMILY SSF55785 244 365 1.66E-13 T 26-04-2016 IPR000014 PAS domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 255 371 9.8E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS28650 b8389b03f689318331f40407451d17d3 593 SUPERFAMILY SSF47384 358 441 1.22E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17275 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 PANTHER PTHR11080:SF17 1 194 7.1E-69 T 26-04-2016 PAM18_RS17275 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 SUPERFAMILY SSF52499 2 191 9.68E-44 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS17275 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 Pfam PF00857 Isochorismatase family 23 193 4.3E-35 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS17275 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 PANTHER PTHR11080 1 194 7.1E-69 T 26-04-2016 PAM18_RS17275 a60b7d1ae3f69c9e5beb2e016f57a3f7 198 Gene3D G3DSA:3.40.50.850 16 192 1.6E-45 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 101 107 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 389 407 2.1E-17 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 370 387 2.1E-17 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 132 152 2.1E-17 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 97 111 2.1E-17 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 412 432 2.1E-17 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 Pfam PF01555 DNA methylase 98 423 1.1E-41 T 26-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PANTHER PTHR13370:SF7 66 282 7.2E-51 T 26-04-2016 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PANTHER PTHR13370:SF7 346 446 7.2E-51 T 26-04-2016 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 Gene3D G3DSA:3.40.50.150 74 225 1.2E-58 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 Gene3D G3DSA:3.40.50.150 332 460 1.2E-58 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 SUPERFAMILY SSF53335 349 441 1.13E-57 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 SUPERFAMILY SSF53335 72 224 1.13E-57 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PANTHER PTHR13370 66 282 7.2E-51 T 26-04-2016 PAM18_RS03605 e1eb51c0d5bd1b23a45bc6c7622270b0 575 PANTHER PTHR13370 346 446 7.2E-51 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 911 3.8E-37 T 26-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 Pfam PF13244 Domain of unknown function (DUF4040) 611 674 2.2E-17 T 26-04-2016 IPR025383 Domain of unknown function DUF4040 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 2.4E-11 T 26-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 Pfam PF00361 Proton-conducting membrane transporter 126 401 1.9E-64 T 26-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PANTHER PTHR22773 1 576 3.9E-249 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 97 4.9E-5 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 351 373 4.9E-5 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 256 278 4.9E-5 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PANTHER PTHR22773:SF46 1 576 3.9E-249 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 8.6E-38 T 26-04-2016 PAM18_RS20375 5b120f839c1ce69d12960eaecb254e34 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 8.6E-38 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Pfam PF01568 Molydopterin dinucleotide binding domain 652 737 1.7E-5 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Gene3D G3DSA:3.40.50.740 113 186 9.0E-57 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Gene3D G3DSA:3.40.50.740 399 630 9.0E-57 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Gene3D G3DSA:2.40.40.20 649 769 3.9E-7 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 SUPERFAMILY SSF50692 649 768 2.49E-14 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 PIRSF PIRSF000144 2 770 0.0 T 26-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 PANTHER PTHR11615 275 773 0.0 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 PANTHER PTHR11615 53 256 0.0 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 PANTHER PTHR11615:SF114 275 773 0.0 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 PANTHER PTHR11615:SF114 53 256 0.0 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Pfam PF00384 Molybdopterin oxidoreductase 113 253 7.8E-11 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Pfam PF00384 Molybdopterin oxidoreductase 318 495 8.3E-10 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 Gene3D G3DSA:3.40.228.10 187 398 4.6E-54 T 26-04-2016 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 17 765 2.3E-288 T 26-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 PAM18_RS27090 2c8fc78d0a7ea1e58e8159229a1b6608 773 SUPERFAMILY SSF53706 51 634 3.14E-147 T 26-04-2016 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 Gene3D G3DSA:1.20.1250.20 12 186 7.0E-22 T 26-04-2016 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 PANTHER PTHR23506 14 406 6.9E-86 T 26-04-2016 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 PRINTS PR01035 Tetracycline resistance protein signature 50 69 1.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 PRINTS PR01035 Tetracycline resistance protein signature 318 338 1.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 Pfam PF07690 Major Facilitator Superfamily 17 271 1.3E-16 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 PANTHER PTHR23506:SF3 14 406 6.9E-86 T 26-04-2016 PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 SUPERFAMILY SSF103473 12 401 1.96E-33 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01685 92d74ee122ab1de833f3e7a47daf85f6 413 Gene3D G3DSA:1.20.1250.20 219 401 1.5E-6 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Gene3D G3DSA:2.30.30.40 487 508 2.8E-12 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Gene3D G3DSA:2.30.30.40 573 618 2.8E-12 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SUPERFAMILY SSF55874 303 485 1.31E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Gene3D G3DSA:3.30.565.10 305 486 3.9E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SMART SM00387 344 487 4.6E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 9.3E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 9.3E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 9.3E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 486 4.6E-13 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Gene3D G3DSA:1.20.120.160 6 161 5.2E-30 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SMART SM00448 646 760 4.4E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Pfam PF01584 CheW-like domain 493 621 1.3E-18 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SMART SM00073 8 105 3.4E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PANTHER PTHR22617 152 238 3.6E-146 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PANTHER PTHR22617 277 634 3.6E-146 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SUPERFAMILY SSF50341 486 618 5.89E-25 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SMART SM00260 479 618 3.0E-11 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SUPERFAMILY SSF47226 8 105 4.58E-24 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Pfam PF01627 Hpt domain 11 101 1.3E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Gene3D G3DSA:3.40.50.2300 643 764 4.1E-32 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 Pfam PF00072 Response regulator receiver domain 648 759 1.4E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PANTHER PTHR22617:SF6 152 238 3.6E-146 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 PANTHER PTHR22617:SF6 277 634 3.6E-146 T 26-04-2016 PAM18_RS06290 aa90a2f97afc6d6b754af6229f084add 769 SUPERFAMILY SSF52172 644 764 4.7E-31 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-39 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-39 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-39 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-39 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 PANTHER PTHR12220 1 137 1.4E-73 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 SUPERFAMILY SSF54686 1 134 4.19E-53 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.3E-47 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 26-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.2E-60 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 26-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.12 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 PAM18_RS03460 eea4470f9113d11957d63cc6a572200f 137 Gene3D G3DSA:3.90.1170.10 23 134 1.5E-52 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PAM18_RS11080 af94e70ff67304009baba9017442898b 193 PANTHER PTHR40202:SF1 1 193 4.5E-67 T 26-04-2016 PAM18_RS11080 af94e70ff67304009baba9017442898b 193 Pfam PF01966 HD domain 32 91 2.7E-8 T 26-04-2016 IPR006674 HD domain PAM18_RS11080 af94e70ff67304009baba9017442898b 193 SUPERFAMILY SSF109604 29 103 1.41E-8 T 26-04-2016 PAM18_RS11080 af94e70ff67304009baba9017442898b 193 PANTHER PTHR40202 1 193 4.5E-67 T 26-04-2016 PAM18_RS11080 af94e70ff67304009baba9017442898b 193 Gene3D G3DSA:1.10.3210.10 37 101 8.4E-7 T 26-04-2016 IPR006674 HD domain PAM18_RS11080 af94e70ff67304009baba9017442898b 193 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 7 180 8.2E-76 T 26-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 PANTHER PTHR11731:SF123 157 429 6.1E-119 T 26-04-2016 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 PANTHER PTHR11731:SF123 4 120 6.1E-119 T 26-04-2016 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.130.10.10 150 429 4.8E-75 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 236 271 7.6E-13 T 26-04-2016 IPR011659 WD40-like Beta Propeller PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 279 314 1.8E-13 T 26-04-2016 IPR011659 WD40-like Beta Propeller PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 372 400 0.042 T 26-04-2016 IPR011659 WD40-like Beta Propeller PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 200 227 9.4E-7 T 26-04-2016 IPR011659 WD40-like Beta Propeller PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 428 4.1E-155 T 26-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:3.40.50.10070 26 149 8.0E-46 T 26-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF69304 153 429 2.22E-54 T 26-04-2016 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Hamap MF_00671 Protein TolB [tolB]. 4 427 34.732 T 26-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 PANTHER PTHR11731 157 429 6.1E-119 T 26-04-2016 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 PANTHER PTHR11731 4 120 6.1E-119 T 26-04-2016 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF52964 29 158 2.75E-39 T 26-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PAM18_RS20755 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF04052 TolB amino-terminal domain 25 126 4.9E-30 T 26-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PANTHER PTHR10992 114 369 1.0E-53 T 26-04-2016 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF53474 111 369 3.08E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:3.40.50.1820 96 368 6.5E-61 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF51230 3 92 2.36E-21 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 173 8.3E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 229 8.3E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 318 332 8.3E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 215 8.3E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00561 alpha/beta hydrolase fold 133 355 9.9E-26 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:2.40.50.100 3 90 3.7E-23 T 26-04-2016 PAM18_RS04010 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00364 Biotin-requiring enzyme 6 76 2.7E-14 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS18330 2ed90014999ce20ee8b6aa3b61d05dbd 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 19 109 1.2E-24 T 26-04-2016 IPR010279 Protein of unknown function DUF883, ElaB PAM18_RS18330 2ed90014999ce20ee8b6aa3b61d05dbd 110 PANTHER PTHR35893:SF3 6 110 2.1E-49 T 26-04-2016 PAM18_RS18330 2ed90014999ce20ee8b6aa3b61d05dbd 110 PANTHER PTHR35893 6 110 2.1E-49 T 26-04-2016 PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 85 101 - T 26-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 Pfam PF07859 alpha/beta hydrolase fold 85 285 1.1E-58 T 26-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 PANTHER PTHR23024:SF47 80 314 2.5E-64 T 26-04-2016 PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 153 165 - T 26-04-2016 IPR033140 Lipase, GDXG, putative serine active site PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 Gene3D G3DSA:3.40.50.1820 53 306 5.7E-66 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 PANTHER PTHR23024 80 314 2.5E-64 T 26-04-2016 PAM18_RS15110 4cf02e8708d0877ce331a50fe53ab9ad 318 SUPERFAMILY SSF53474 55 305 6.23E-56 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18195 cf9b9ee554b0ac66e68f122d30ce37a2 249 SUPERFAMILY SSF52833 61 199 1.93E-8 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS18195 cf9b9ee554b0ac66e68f122d30ce37a2 249 Pfam PF05988 Bacterial protein of unknown function (DUF899) 6 234 2.7E-96 T 26-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like PAM18_RS18195 cf9b9ee554b0ac66e68f122d30ce37a2 249 Gene3D G3DSA:3.40.30.10 85 198 5.6E-6 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS15400 15807e2a392212a5d6efae2a132b5f06 456 PIRSF PIRSF006060 1 454 2.2E-78 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS15400 15807e2a392212a5d6efae2a132b5f06 456 PANTHER PTHR11785 9 452 0.0 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS15400 15807e2a392212a5d6efae2a132b5f06 456 Pfam PF00324 Amino acid permease 22 380 3.5E-38 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS15400 15807e2a392212a5d6efae2a132b5f06 456 PANTHER PTHR11785:SF55 9 452 0.0 T 26-04-2016 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.10.540.10 5 134 1.9E-42 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 6.1E-22 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:2.40.110.10 135 227 5.6E-33 T 26-04-2016 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 PANTHER PTHR10909:SF307 1 392 1.1E-270 T 26-04-2016 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF47203 243 390 3.54E-42 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.1E-34 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 385 9.2E-28 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.20.140.10 228 388 5.9E-44 T 26-04-2016 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF56645 7 238 6.54E-77 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS02255 8030e68d0852747dddc47237a6bc3920 393 PANTHER PTHR10909 1 392 1.1E-270 T 26-04-2016 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00575 S1 RNA binding domain 620 691 3.7E-18 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.536 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 3 143 4.0E-50 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 PANTHER PTHR11252 2 693 0.0 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:2.40.50.140 624 693 6.8E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 PANTHER PTHR11252:SF0 2 693 0.0 T 26-04-2016 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF50249 615 693 1.94E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 0.0 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 PIRSF PIRSF005499 1 700 4.0E-294 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00322 553 618 2.4E-13 T 26-04-2016 IPR004087 K Homology domain GO:0003676 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 451 550 4.49E-29 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 293 489 1.92E-49 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 146 210 4.3E-11 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 9.0E-6 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 3 225 5.2E-82 T 26-04-2016 IPR027408 PNPase/RNase PH domain PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 314 544 6.9E-90 T 26-04-2016 IPR027408 PNPase/RNase PH domain PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00013 KH domain 558 613 3.7E-13 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.1370.10 553 623 2.6E-24 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54791 556 641 7.01E-24 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 8.0E-23 T 26-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00316 621 691 8.9E-25 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.1E-22 T 26-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 2.6E-22 T 26-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 144 235 8.41E-27 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS24820 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:1.10.10.400 239 313 4.7E-20 T 26-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 427 4.7E-103 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Pfam PF00501 AMP-binding enzyme 10 403 1.8E-93 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Gene3D G3DSA:3.40.50.980 2 162 3.1E-42 T 26-04-2016 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 PANTHER PTHR24095 3 485 1.7E-136 T 26-04-2016 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 485 1.2E-13 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 PRINTS PR00154 AMP-binding signature 152 163 6.1E-5 T 26-04-2016 IPR020459 AMP-binding PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 PRINTS PR00154 AMP-binding signature 164 172 6.1E-5 T 26-04-2016 IPR020459 AMP-binding PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Gene3D G3DSA:2.30.38.10 327 395 1.2E-14 T 26-04-2016 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Gene3D G3DSA:3.30.300.30 397 496 5.2E-29 T 26-04-2016 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 Gene3D G3DSA:3.40.50.980 163 317 1.6E-44 T 26-04-2016 PAM18_RS12280 123a4f861381c096de1414a02c9caf74 497 SUPERFAMILY SSF56801 3 497 7.33E-143 T 26-04-2016 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 SUPERFAMILY SSF47240 4 155 7.31E-48 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PANTHER PTHR30295 1 154 6.2E-69 T 26-04-2016 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 Pfam PF00210 Ferritin-like domain 17 155 4.6E-28 T 26-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 6.3E-12 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 6.3E-12 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 6.3E-12 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 26-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 Gene3D G3DSA:1.20.1260.10 2 155 2.0E-67 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PANTHER PTHR30295:SF6 1 154 6.2E-69 T 26-04-2016 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 26-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PAM18_RS20805 87366b4bbf4a500df7a09d80abdc4cc0 156 PIRSF PIRSF005900 1 156 7.5E-47 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 PANTHER PTHR30313 3 650 2.3E-166 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Gene3D G3DSA:1.10.860.10 515 652 5.6E-31 T 26-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Gene3D G3DSA:1.20.50.20 372 429 1.7E-22 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SUPERFAMILY SSF57783 4 101 1.7E-37 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Hamap MF_00974 DNA primase [dnaG]. 4 655 30.062 T 26-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SMART SM00766 526 654 9.3E-34 T 26-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SUPERFAMILY SSF56731 117 427 7.19E-110 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Gene3D G3DSA:3.40.1360.10 244 368 5.8E-48 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SUPERFAMILY SSF117023 525 654 7.85E-27 T 26-04-2016 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Gene3D G3DSA:3.90.980.10 117 243 2.6E-46 T 26-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 255 5.3E-43 T 26-04-2016 IPR013264 DNA primase, catalytic core, N-terminal PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Pfam PF08278 DNA primase DnaG DnaB-binding 529 652 3.7E-23 T 26-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Pfam PF10410 DnaB-helicase binding domain of primase 374 426 1.5E-8 T 26-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SMART SM00400 36 90 1.8E-34 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 5.0E-147 T 26-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Pfam PF01807 CHC2 zinc finger 6 101 9.6E-42 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Gene3D G3DSA:3.90.580.10 2 101 1.5E-41 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 SMART SM00493 262 333 2.8E-21 T 26-04-2016 IPR006171 Toprim domain PAM18_RS02925 23b242240f65345033c5712e3ca4ace8 664 Pfam PF13662 Toprim domain 262 331 8.9E-18 T 26-04-2016 IPR006171 Toprim domain PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 Gene3D G3DSA:2.40.100.10 92 256 3.3E-43 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 SUPERFAMILY SSF50891 92 248 3.22E-26 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 PANTHER PTHR34698 1 102 1.3E-94 T 26-04-2016 PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 PANTHER PTHR34698 119 272 1.3E-94 T 26-04-2016 PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 PANTHER PTHR34698:SF2 1 102 1.3E-94 T 26-04-2016 PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 PANTHER PTHR34698:SF2 119 272 1.3E-94 T 26-04-2016 PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 Pfam PF02682 Allophanate hydrolase subunit 1 6 220 4.3E-48 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 Gene3D G3DSA:3.30.1360.40 6 79 7.7E-11 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 SUPERFAMILY SSF160467 6 96 3.66E-14 T 26-04-2016 PAM18_RS02505 9f643df2e27b14efc6f9c79338ded51d 292 SMART SM00796 5 226 3.2E-73 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 186 1.7E-13 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 9.1E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 9.1E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 9.1E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 9.1E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 9.1E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 SUPERFAMILY SSF56784 5 203 1.09E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 2.2E-13 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PANTHER PTHR18901:SF7 2 220 1.1E-104 T 26-04-2016 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 PANTHER PTHR18901 2 220 1.1E-104 T 26-04-2016 PAM18_RS27070 1b462a0ffcee93ecd6f859c9f41fcea5 221 Gene3D G3DSA:3.40.50.1000 8 195 3.8E-30 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.1E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 Gene3D G3DSA:3.40.190.10 98 184 4.4E-9 T 26-04-2016 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 SUPERFAMILY SSF46785 11 97 4.96E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 SUPERFAMILY SSF53850 98 305 1.14E-47 T 26-04-2016 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 Gene3D G3DSA:1.10.10.10 11 97 9.8E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 PANTHER PTHR30126 11 308 4.0E-153 T 26-04-2016 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 PANTHER PTHR30126:SF15 11 308 4.0E-153 T 26-04-2016 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 Pfam PF03466 LysR substrate binding domain 97 301 3.4E-50 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.0E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.0E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.0E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14295 97c430997aeda67d2055a6b571710c00 312 Gene3D G3DSA:3.40.190.10 185 269 7.6E-23 T 26-04-2016 PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 192 6.7E-5 T 26-04-2016 PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PANTHER PTHR24322:SF356 161 192 1.2E-56 T 26-04-2016 PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.6E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 SUPERFAMILY SSF51735 3 250 1.15E-65 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.6E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.6E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.6E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PANTHER PTHR24322:SF356 10 145 1.2E-56 T 26-04-2016 PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 Gene3D G3DSA:3.40.50.720 2 252 2.3E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 Pfam PF00106 short chain dehydrogenase 7 202 5.0E-49 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PANTHER PTHR24322 161 192 1.2E-56 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS12805 4bfa76989016c7e4e5a10296c207f737 255 PANTHER PTHR24322 10 145 1.2E-56 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 Pfam PF04453 Organic solvent tolerance protein 403 837 9.6E-120 T 26-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 Pfam PF03968 OstA-like protein 158 291 6.2E-11 T 26-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 20 905 21.553 T 26-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 PANTHER PTHR30189 32 519 2.1E-123 T 26-04-2016 PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 PANTHER PTHR30189 543 923 2.1E-123 T 26-04-2016 PAM18_RS03015 0449e0e88c983fec4b275e8dc3d2ac82 930 Gene3D G3DSA:2.60.450.10 151 302 3.2E-19 T 26-04-2016 PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 SUPERFAMILY SSF51230 3 126 1.44E-40 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 30.581 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 5.0E-46 T 26-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 Gene3D G3DSA:2.40.50.100 7 126 1.5E-48 T 26-04-2016 PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 PANTHER PTHR11715:SF12 1 128 1.1E-67 T 26-04-2016 PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 PANTHER PTHR11715 1 128 1.1E-67 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 Pfam PF01597 Glycine cleavage H-protein 8 125 1.1E-42 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS27260 4c0539e3dd946356988e70ad65d94090 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 PANTHER PTHR11374:SF18 1 444 2.1E-258 T 26-04-2016 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 6.6E-36 T 26-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.5E-134 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Gene3D G3DSA:1.20.5.100 207 233 2.5E-17 T 26-04-2016 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Gene3D G3DSA:3.40.50.720 235 444 8.9E-76 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 PIRSF PIRSF500134 1 442 2.2E-181 T 26-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 2.9E-31 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 SUPERFAMILY SSF48179 204 301 1.5E-32 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 PANTHER PTHR11374 1 444 2.1E-258 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.6E-60 T 26-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 SMART SM00984 320 424 2.3E-51 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 Gene3D G3DSA:3.40.50.720 1 206 7.5E-72 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 PIRSF PIRSF000124 1 439 1.3E-141 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 SUPERFAMILY SSF51735 1 195 4.47E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07350 7ad172923077a01fe8597ce9d35b0a59 464 SUPERFAMILY SSF52413 311 435 6.67E-41 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 221 2.5E-8 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 PANTHER PTHR10909:SF334 20 419 8.5E-251 T 26-04-2016 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 384 9.0E-17 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Gene3D G3DSA:1.10.540.10 18 104 4.2E-20 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 103 4.8E-6 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 SUPERFAMILY SSF56645 28 230 1.09E-43 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 PANTHER PTHR10909 20 419 8.5E-251 T 26-04-2016 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Gene3D G3DSA:2.40.110.10 142 224 2.5E-20 T 26-04-2016 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 SUPERFAMILY SSF47203 241 386 2.58E-15 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS13970 588c94c5449f3dd10bc3a708bd344e7a 419 Gene3D G3DSA:1.20.140.10 225 408 2.5E-53 T 26-04-2016 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 PANTHER PTHR14503 1 44 4.6E-23 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.452 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 26-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 Pfam PF00468 Ribosomal protein L34 1 44 2.0E-25 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.7E-26 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS29120 c555a9deef9cb89758ebe9dc5b299734 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 4.0E-15 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 Gene3D G3DSA:3.40.190.80 200 335 2.4E-57 T 26-04-2016 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.3E-74 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PIRSF PIRSF500210 1 336 4.6E-128 T 26-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 SUPERFAMILY SSF56655 2 334 6.35E-117 T 26-04-2016 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 47.094 T 26-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 196 1.6E-60 T 26-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PANTHER PTHR11556 4 336 4.4E-155 T 26-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 PIRSF PIRSF000904 1 336 1.2E-126 T 26-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS26710 9bca65c961b51172756afe24be41ad17 336 Gene3D G3DSA:3.30.540.10 4 198 6.8E-75 T 26-04-2016 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Gene3D G3DSA:3.30.1490.20 133 205 5.9E-28 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 4.0E-73 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.4E-41 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 SUPERFAMILY SSF51246 334 449 1.46E-39 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 SUPERFAMILY SSF52440 3 116 9.35E-44 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 6.5E-39 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 PANTHER PTHR18866 2 451 1.7E-268 T 26-04-2016 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Gene3D G3DSA:3.30.470.20 207 448 2.8E-93 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 SUPERFAMILY SSF56059 86 351 1.22E-67 T 26-04-2016 PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 Gene3D G3DSA:3.40.50.20 5 132 6.1E-48 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS02500 ac3860cb99437d87bfda3113bc74c5a9 458 SMART SM00878 339 445 7.1E-60 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 Gene3D G3DSA:3.40.190.10 97 196 2.3E-30 T 26-04-2016 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 PANTHER PTHR30537 1 302 3.9E-201 T 26-04-2016 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 SUPERFAMILY SSF53850 97 300 2.53E-36 T 26-04-2016 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 Pfam PF03466 LysR substrate binding domain 93 299 2.3E-37 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.1E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.1E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.1E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 5.6E-24 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 Gene3D G3DSA:1.10.10.10 8 85 3.5E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 8 298 7.9E-140 T 26-04-2016 IPR017786 Transcription factor, choline sulphate-utilisation, putative PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 SUPERFAMILY SSF46785 6 86 5.53E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00160 8ff7c5a987d82bc8db3471f0fa941e40 304 PANTHER PTHR30537:SF22 1 302 3.9E-201 T 26-04-2016 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 SUPERFAMILY SSF51621 4 264 1.94E-101 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 Gene3D G3DSA:3.20.20.60 3 264 2.1E-109 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.269 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 PIRSF PIRSF000388 2 266 1.2E-97 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 6.8E-100 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 9.5E-106 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 PANTHER PTHR20881 1 265 3.2E-175 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS24765 47c6aff6252669f9073a300921ffc100 266 PANTHER PTHR20881:SF3 1 265 3.2E-175 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 1.0E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SMART SM00387 338 446 2.5E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SUPERFAMILY SSF55874 283 444 4.58E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 1.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 1.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Gene3D G3DSA:1.10.287.130 224 278 1.4E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Pfam PF00672 HAMP domain 160 229 2.2E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PANTHER PTHR24423:SF477 51 67 4.6E-67 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PANTHER PTHR24423:SF477 172 444 4.6E-67 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SUPERFAMILY SSF158472 178 230 4.58E-7 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SUPERFAMILY SSF47384 218 292 1.96E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 40 149 3.0E-35 T 26-04-2016 IPR031930 2-component histidine kinase, sensor domain PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PANTHER PTHR24423 51 67 4.6E-67 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 PANTHER PTHR24423 172 444 4.6E-67 T 26-04-2016 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Gene3D G3DSA:3.30.565.10 279 444 4.5E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SMART SM00304 178 233 4.1E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 433 3.9E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20975 c5fca5234143c61c9d67eb6f98aca48c 446 SMART SM00388 234 293 4.5E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 310 317 - T 26-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF00800 Prephenate dehydratase 97 274 1.1E-62 T 26-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 94 181 8.7E-32 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 PANTHER PTHR21022:SF0 2 361 5.9E-144 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 85 5.4E-32 T 26-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF55021 267 362 4.93E-28 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 PIRSF PIRSF001500 1 365 6.6E-149 T 26-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:1.20.59.10 3 93 1.4E-20 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01842 ACT domain 283 348 9.6E-11 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 248 270 - T 26-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 PANTHER PTHR21022 2 361 5.9E-144 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 182 260 4.9E-29 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 SMART SM00830 11 95 1.1E-26 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF48600 6 99 2.75E-19 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01817 Chorismate mutase type II 11 93 1.7E-22 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF53850 96 281 1.19E-60 T 26-04-2016 PAM18_RS09255 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.30.70.260 276 363 1.0E-30 T 26-04-2016 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 2.3E-28 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PRINTS PR00050 Cold shock protein signature 42 60 6.6E-17 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PRINTS PR00050 Cold shock protein signature 7 22 6.6E-17 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PRINTS PR00050 Cold shock protein signature 27 36 6.6E-17 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 SMART SM00357 6 69 4.0E-29 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PANTHER PTHR11544:SF63 1 69 2.8E-45 T 26-04-2016 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 SUPERFAMILY SSF50249 3 68 1.09E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PIRSF PIRSF002599 1 69 1.6E-22 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 Gene3D G3DSA:2.40.50.140 5 68 8.9E-30 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS08730 d401db42343047fc26861ae9ec183bf4 69 PANTHER PTHR11544 1 69 2.8E-45 T 26-04-2016 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 Pfam PF01026 TatD related DNase 3 254 1.7E-77 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 PANTHER PTHR10060 1 258 6.9E-131 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 SUPERFAMILY SSF51556 2 256 1.43E-85 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 PIRSF PIRSF005902 1 258 5.7E-76 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 Gene3D G3DSA:3.20.20.140 1 256 1.3E-84 T 26-04-2016 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 8.5E-84 T 26-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 PAM18_RS10280 387a3edbef936f43063ae6253b4ada3d 258 PANTHER PTHR10060:SF20 1 258 6.9E-131 T 26-04-2016 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:1.10.10.10 4 83 5.3E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 SUPERFAMILY SSF53850 89 294 4.71E-23 T 26-04-2016 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 PANTHER PTHR30126 2 298 2.0E-155 T 26-04-2016 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 SUPERFAMILY SSF46785 4 89 2.91E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:3.40.190.10 194 261 1.6E-7 T 26-04-2016 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 Pfam PF03466 LysR substrate binding domain 90 292 6.7E-29 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:3.40.190.10 84 193 7.7E-9 T 26-04-2016 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.5E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28360 03887e040c2f4a6bc29996a7295e6d18 302 PANTHER PTHR30126:SF2 2 298 2.0E-155 T 26-04-2016 PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 Gene3D G3DSA:3.40.50.1820 12 290 1.8E-28 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 SUPERFAMILY SSF53474 9 151 1.88E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 SUPERFAMILY SSF53474 186 290 1.88E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 PIRSF PIRSF037442 6 294 3.8E-94 T 26-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 PANTHER PTHR11614:SF82 11 290 7.5E-165 T 26-04-2016 PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 PANTHER PTHR11614 11 290 7.5E-165 T 26-04-2016 PAM18_RS19395 2cb8de8e473040e708caad7795fa5dcc 294 Pfam PF12146 Serine aminopeptidase, S33 46 125 9.7E-10 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 SUPERFAMILY SSF51182 71 196 1.81E-15 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 SUPERFAMILY SSF47413 26 87 1.15E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 Gene3D G3DSA:1.10.260.40 31 122 1.9E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 Gene3D G3DSA:2.60.120.10 123 189 2.6E-20 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 PANTHER PTHR10245:SF7 1 195 1.7E-37 T 26-04-2016 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 PANTHER PTHR10245 1 195 1.7E-37 T 26-04-2016 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 SMART SM00530 31 86 6.1E-14 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 Pfam PF01381 Helix-turn-helix 32 81 6.8E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS18150 c667cd8b90eabf8b73eb5ae7973a325b 201 Pfam PF07883 Cupin domain 143 190 1.2E-7 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 SUPERFAMILY SSF103190 84 184 3.92E-10 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 SUPERFAMILY SSF58104 320 629 1.07E-75 T 26-04-2016 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 SMART SM00283 367 628 7.2E-96 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 PANTHER PTHR32089 11 629 0.0 T 26-04-2016 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 Gene3D G3DSA:1.10.287.950 381 598 1.5E-56 T 26-04-2016 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 627 1.7E-47 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 Gene3D G3DSA:3.30.450.20 141 275 1.3E-32 T 26-04-2016 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 Pfam PF00672 HAMP domain 279 348 8.1E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 PANTHER PTHR32089:SF39 11 629 0.0 T 26-04-2016 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 SMART SM00304 387 447 18.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 SMART SM00304 298 352 5.5E-15 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22485 a8caebb82cf0bdc69bce178a19af87da 629 Pfam PF02743 Cache domain 37 260 9.6E-32 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 PANTHER PTHR12231 254 398 1.2E-60 T 26-04-2016 PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 PANTHER PTHR12231 1 30 1.2E-60 T 26-04-2016 PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SMART SM00450 377 472 1.1E-5 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SMART SM00450 131 229 3.9E-7 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SMART SM00450 267 359 6.1E-7 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SMART SM00450 8 105 3.1E-14 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SUPERFAMILY SSF52821 254 352 8.64E-24 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Pfam PF00581 Rhodanese-like domain 132 225 4.8E-9 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Pfam PF00581 Rhodanese-like domain 379 468 1.1E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Pfam PF00581 Rhodanese-like domain 279 352 1.8E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Pfam PF00581 Rhodanese-like domain 16 101 2.1E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SUPERFAMILY SSF52821 375 524 2.1E-31 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Gene3D G3DSA:3.40.250.10 15 113 1.8E-19 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 PANTHER PTHR12231:SF83 254 398 1.2E-60 T 26-04-2016 PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 PANTHER PTHR12231:SF83 1 30 1.2E-60 T 26-04-2016 PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Gene3D G3DSA:3.40.250.10 257 352 4.5E-17 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SUPERFAMILY SSF52821 14 121 5.76E-25 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 SUPERFAMILY SSF52821 106 235 6.94E-30 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Gene3D G3DSA:3.40.250.10 366 477 1.5E-18 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 Gene3D G3DSA:3.40.250.10 119 235 7.4E-19 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS12185 1af6bb6f435e6d5790c5da3ef8da9647 527 ProSitePatterns PS00380 Rhodanese signature 1. 402 413 - T 26-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 558 1.8E-45 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 SUPERFAMILY SSF58104 251 560 1.57E-79 T 26-04-2016 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 SMART SM01049 44 135 4.3E-26 T 26-04-2016 IPR033480 Single Cache domain 2 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 SMART SM00283 298 559 7.6E-79 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PANTHER PTHR32089:SF34 87 560 1.1E-171 T 26-04-2016 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.7E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 423 2.7E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.7E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 2.7E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 Pfam PF00672 HAMP domain 211 279 2.6E-15 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 Pfam PF17200 Single Cache domain 2 50 195 2.5E-25 T 26-04-2016 IPR033480 Single Cache domain 2 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 Gene3D G3DSA:3.30.450.20 39 188 3.0E-33 T 26-04-2016 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 PANTHER PTHR32089 87 560 1.1E-171 T 26-04-2016 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 Gene3D G3DSA:1.10.287.950 313 529 3.0E-58 T 26-04-2016 PAM18_RS11930 b89680e0162cf0805249e405e95b29c1 560 SMART SM00304 229 283 6.5E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 PANTHER PTHR34203:SF2 221 335 3.0E-14 T 26-04-2016 PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 PANTHER PTHR34203 221 335 3.0E-14 T 26-04-2016 PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 SUPERFAMILY SSF53335 52 371 4.15E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 Pfam PF05050 Methyltransferase FkbM domain 208 333 1.3E-14 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 Gene3D G3DSA:3.40.50.150 200 372 5.5E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS20170 bf21311d42e8888a97484ac3b2aadd72 379 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 206 333 7.1E-29 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 91 175 1.3E-17 T 26-04-2016 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF46785 2 84 6.61E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF03466 LysR substrate binding domain 91 292 2.5E-57 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF53850 91 296 6.83E-51 T 26-04-2016 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 176 258 7.3E-24 T 26-04-2016 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 PANTHER PTHR30126 3 307 2.9E-111 T 26-04-2016 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:1.10.10.10 2 82 3.9E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08060 e22205a348c2331b3d80aa45c4e00a97 308 PANTHER PTHR30126:SF11 3 307 2.9E-111 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 474 7.6E-28 T 26-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 PANTHER PTHR24960:SF45 3 396 1.1E-180 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Pfam PF12801 4Fe-4S binding domain 101 131 3.2E-5 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 473 1.1E-168 T 26-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Gene3D G3DSA:2.60.40.10 358 474 1.3E-30 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Gene3D G3DSA:3.30.70.20 227 284 1.7E-5 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 SUPERFAMILY SSF54862 109 137 2.58E-33 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 SUPERFAMILY SSF54862 178 364 2.58E-33 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Pfam PF13746 4Fe-4S dicluster domain 223 329 4.8E-45 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 PANTHER PTHR24960 3 396 1.1E-180 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 Gene3D G3DSA:3.30.70.20 285 312 6.8E-5 T 26-04-2016 PAM18_RS04115 124ac855a645b09e1d6e9fea48424465 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PANTHER PTHR11638:SF80 76 904 0.0 T 26-04-2016 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 286 419 1.5E-15 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 625 643 6.3E-40 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 717 6.3E-40 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 732 746 6.3E-40 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 670 688 6.3E-40 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 100 147 1.0E-7 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 175 226 5.2E-15 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SUPERFAMILY SSF81923 87 228 5.3E-27 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SUPERFAMILY SSF52540 242 583 4.98E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 655 673 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SMART SM00382 621 795 4.7E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SMART SM00382 281 429 5.2E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 PANTHER PTHR11638 76 904 0.0 T 26-04-2016 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Pfam PF07724 AAA domain (Cdc48 subfamily) 620 788 5.2E-54 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 794 873 7.2E-22 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Gene3D G3DSA:1.10.8.60 428 512 1.2E-33 T 26-04-2016 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Gene3D G3DSA:3.40.50.300 575 803 1.3E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SMART SM01086 794 884 1.7E-24 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Gene3D G3DSA:1.10.1780.10 89 226 2.2E-34 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 SUPERFAMILY SSF52540 570 881 1.57E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Gene3D G3DSA:3.40.50.300 242 427 1.4E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02320 c7c201b566ae5153a5b23013572d7161 932 Gene3D G3DSA:1.10.8.60 804 879 1.7E-23 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 SUPERFAMILY SSF46785 3 85 1.04E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 4.7E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 Gene3D G3DSA:3.40.190.10 86 149 3.1E-5 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 PANTHER PTHR30537 1 299 2.1E-164 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 PANTHER PTHR30537:SF1 1 299 2.1E-164 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 Pfam PF03466 LysR substrate binding domain 90 294 7.5E-33 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 SUPERFAMILY SSF53850 92 294 1.81E-36 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 Gene3D G3DSA:3.40.190.10 163 265 2.5E-19 T 26-04-2016 PAM18_RS16965 0c7e04fd74ad0dcdc1bf384d34e3496c 304 Gene3D G3DSA:1.10.10.10 5 85 2.6E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:2.30.38.10 365 441 1.1E-18 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 PANTHER PTHR24096 13 551 0.0 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.30.300.30 442 543 3.8E-25 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 PANTHER PTHR24096:SF136 13 551 0.0 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.40.50.980 193 349 1.2E-35 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Pfam PF00501 AMP-binding enzyme 34 447 9.5E-89 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.40.50.980 50 192 7.3E-31 T 26-04-2016 PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 536 1.8E-18 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS05160 43775f8f8330cda56877fa65dfe31d63 560 SUPERFAMILY SSF56801 29 546 3.01E-131 T 26-04-2016 PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 PANTHER PTHR30462:SF0 1 762 0.0 T 26-04-2016 PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 PANTHER PTHR30462 1 762 0.0 T 26-04-2016 PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 516 602 3.8E-10 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 280 369 2.5E-11 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 41 131 1.8E-11 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 631 691 2.7E-7 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 395 463 2.0E-8 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24530 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 156 216 4.6E-11 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 Pfam PF00593 TonB dependent receptor 487 761 2.4E-39 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 Gene3D G3DSA:2.40.170.20 159 761 7.4E-113 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 PANTHER PTHR32552 1 764 3.1E-285 T 26-04-2016 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 Gene3D G3DSA:2.170.130.10 23 158 7.3E-39 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 761 6.0E-161 T 26-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 7.4E-28 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 SUPERFAMILY SSF56935 35 760 2.29E-122 T 26-04-2016 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 760 1.5E-126 T 26-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS24665 1e731536da2f6928d1fb24969bb200e6 764 PANTHER PTHR32552:SF18 1 764 3.1E-285 T 26-04-2016 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 167 3.7E-42 T 26-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 SUPERFAMILY SSF103088 60 166 3.92E-35 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 PANTHER PTHR30128:SF18 52 167 8.9E-54 T 26-04-2016 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 113 129 1.3E-20 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 98 113 1.3E-20 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 69 91 1.3E-20 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 PANTHER PTHR30128 52 167 8.9E-54 T 26-04-2016 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 26-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 Gene3D G3DSA:3.30.1330.60 60 167 1.2E-35 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20750 6f5cb405bc7be79abd6ae63dedbb4567 168 Pfam PF00691 OmpA family 68 162 3.5E-25 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 26-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 PIRSF PIRSF000103 1 290 6.9E-75 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 PANTHER PTHR22981:SF62 1 289 4.2E-121 T 26-04-2016 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 6.4E-34 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 Gene3D G3DSA:1.10.1040.10 165 284 1.1E-28 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 SUPERFAMILY SSF51735 1 159 5.17E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 PANTHER PTHR22981 1 289 4.2E-121 T 26-04-2016 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 Gene3D G3DSA:3.40.50.720 1 160 3.9E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 SUPERFAMILY SSF48179 165 287 1.08E-25 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS14565 231138eef4083abd5ef87c74c57496eb 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 1.8E-18 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS14230 cf3347d996e404fd25e7fba784904cbb 171 Pfam PF00583 Acetyltransferase (GNAT) family 62 136 1.8E-13 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS14230 cf3347d996e404fd25e7fba784904cbb 171 PANTHER PTHR23091:SF240 1 138 2.3E-37 T 26-04-2016 PAM18_RS14230 cf3347d996e404fd25e7fba784904cbb 171 Gene3D G3DSA:3.40.630.30 1 138 6.6E-23 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS14230 cf3347d996e404fd25e7fba784904cbb 171 SUPERFAMILY SSF55729 1 138 2.4E-23 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS14230 cf3347d996e404fd25e7fba784904cbb 171 PANTHER PTHR23091 1 138 2.3E-37 T 26-04-2016 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 PANTHER PTHR11695 16 88 6.6E-124 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 PANTHER PTHR11695 124 366 6.6E-124 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 Gene3D G3DSA:3.40.50.720 186 297 3.4E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 Pfam PF00107 Zinc-binding dehydrogenase 194 296 5.8E-27 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 Gene3D G3DSA:3.90.180.10 2 185 5.0E-40 T 26-04-2016 IPR011032 GroES-like PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 SMART SM00829 14 359 5.7E-6 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 147 4.0E-20 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 SUPERFAMILY SSF51735 157 329 5.52E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 SUPERFAMILY SSF50129 2 199 3.96E-39 T 26-04-2016 IPR011032 GroES-like PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 PANTHER PTHR11695:SF281 16 88 6.6E-124 T 26-04-2016 PAM18_RS15000 95619aca5cb29e0053bec8c5c85961c9 366 PANTHER PTHR11695:SF281 124 366 6.6E-124 T 26-04-2016 PAM18_RS15910 cffb405447b27c6f2d70e6bb3142b22a 379 Gene3D G3DSA:2.40.180.10 56 378 5.4E-50 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS15910 cffb405447b27c6f2d70e6bb3142b22a 379 Pfam PF00199 Catalase 73 324 2.0E-11 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS15910 cffb405447b27c6f2d70e6bb3142b22a 379 PANTHER PTHR36195:SF3 83 379 1.5E-59 T 26-04-2016 PAM18_RS15910 cffb405447b27c6f2d70e6bb3142b22a 379 PANTHER PTHR36195 83 379 1.5E-59 T 26-04-2016 PAM18_RS15910 cffb405447b27c6f2d70e6bb3142b22a 379 SUPERFAMILY SSF56634 25 378 2.09E-85 T 26-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 PANTHER PTHR24220 3 251 2.9E-132 T 26-04-2016 PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 Pfam PF00005 ABC transporter 22 177 7.1E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 SMART SM00382 31 225 8.7E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 PANTHER PTHR24220:SF534 3 251 2.9E-132 T 26-04-2016 PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 SUPERFAMILY SSF52540 1 233 1.41E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05580 23bba1a92126994a411a2cbc03358f08 264 Gene3D G3DSA:3.40.50.300 1 234 1.1E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23880 56f4b5f0a255d17a235dd1235304364a 184 SUPERFAMILY SSF143990 19 183 4.45E-51 T 26-04-2016 PAM18_RS23880 56f4b5f0a255d17a235dd1235304364a 184 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 23 182 4.1E-49 T 26-04-2016 IPR012816 Conserved hypothetical protein CHP02464 PAM18_RS23880 56f4b5f0a255d17a235dd1235304364a 184 Pfam PF08719 Domain of unknown function (DUF1768) 25 182 3.1E-52 T 26-04-2016 IPR012816 Conserved hypothetical protein CHP02464 PAM18_RS23880 56f4b5f0a255d17a235dd1235304364a 184 PANTHER PTHR11079 91 181 2.2E-25 T 26-04-2016 PAM18_RS23880 56f4b5f0a255d17a235dd1235304364a 184 PANTHER PTHR11079:SF10 91 181 2.2E-25 T 26-04-2016 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 Pfam PF01554 MatE 27 186 3.5E-35 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 Pfam PF01554 MatE 254 414 1.1E-34 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 PANTHER PTHR11206 10 477 5.2E-230 T 26-04-2016 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 PIRSF PIRSF006603 15 469 5.0E-64 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 432 3.4E-101 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS18140 e280bb28595a46636f7584d8c9a1082c 477 PANTHER PTHR11206:SF153 10 477 5.2E-230 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 SMART SM00267 215 388 3.1E-66 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 PANTHER PTHR10799 259 385 1.2E-32 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 PANTHER PTHR10799 62 210 1.2E-32 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 Gene3D G3DSA:3.30.70.270 228 388 5.5E-56 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 384 1.6E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 PANTHER PTHR10799:SF750 259 385 1.2E-32 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 PANTHER PTHR10799:SF750 62 210 1.2E-32 T 26-04-2016 PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 387 1.2E-52 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS20055 be7949b424a085aaf2350b5eddfc8f89 398 SUPERFAMILY SSF55073 231 387 1.8E-50 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 8.7E-37 T 26-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 26-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 8 109 3.6E-32 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 26-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 Hamap MF_00258 Glutamate racemase [murI]. 6 257 37.126 T 26-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 Gene3D G3DSA:3.40.50.1860 5 175 2.5E-55 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 PANTHER PTHR21198:SF2 1 265 1.2E-105 T 26-04-2016 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 111 257 1.31E-37 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 246 1.8E-65 T 26-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS24315 d40a0df3071453aa4520b1ef807b6275 265 PANTHER PTHR21198 1 265 1.2E-105 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 SUPERFAMILY SSF53706 1 645 3.4E-231 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Gene3D G3DSA:2.40.40.20 683 813 1.1E-49 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Gene3D G3DSA:2.40.40.20 606 651 1.1E-49 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Gene3D G3DSA:3.40.228.10 153 260 3.3E-71 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Gene3D G3DSA:3.40.228.10 1 108 3.3E-71 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Gene3D G3DSA:3.40.50.740 324 473 1.1E-59 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 582 653 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 287 384 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 211 248 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 401 485 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 1 183 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615 677 813 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 SUPERFAMILY SSF50692 624 655 2.49E-44 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 SUPERFAMILY SSF50692 684 813 2.49E-44 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Pfam PF00384 Molybdopterin oxidoreductase 2 382 1.1E-19 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 Pfam PF01568 Molydopterin dinucleotide binding domain 690 806 1.6E-15 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 812 0.0 T 26-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 582 653 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 287 384 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 211 248 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 401 485 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 1 183 9.2E-275 T 26-04-2016 PAM18_RS25195 1b73da88ac0585360d1921bc0c0a0ac3 813 PANTHER PTHR11615:SF126 677 813 9.2E-275 T 26-04-2016 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 Gene3D G3DSA:3.30.910.20 13 59 2.7E-17 T 26-04-2016 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 Gene3D G3DSA:3.30.910.20 97 165 2.7E-17 T 26-04-2016 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 SUPERFAMILY SSF111384 22 165 9.55E-29 T 26-04-2016 IPR024930 Skp domain PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 Pfam PF03938 Outer membrane protein (OmpH-like) 9 164 6.9E-25 T 26-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 PANTHER PTHR35089 2 166 2.4E-52 T 26-04-2016 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 SMART SM00935 11 165 1.2E-37 T 26-04-2016 IPR005632 Chaperone protein Skp GO:0051082 PAM18_RS06575 04fa9fa48b6fd250740916f17a2eca1f 168 PANTHER PTHR35089:SF1 2 166 2.4E-52 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PANTHER PTHR24423 566 784 3.2E-154 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PANTHER PTHR24423 185 239 3.2E-154 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PANTHER PTHR24423 279 514 3.2E-154 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF55874 337 509 2.75E-46 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF00672 HAMP domain 172 239 8.7E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Gene3D G3DSA:3.40.50.2300 663 786 1.2E-39 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 167 1.6E-19 T 26-04-2016 IPR019247 Histidine kinase BarA, N-terminal PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 510 3.1E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SMART SM00304 191 243 1.4E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SMART SM00448 665 781 4.3E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF47384 269 349 4.51E-23 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF00072 Response regulator receiver domain 668 781 1.1E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 5.8E-22 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF52172 663 786 5.12E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SMART SM00387 395 511 3.4E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF47226 764 777 3.79E-22 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF47226 806 901 3.79E-22 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SMART SM00388 283 348 4.0E-27 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Gene3D G3DSA:3.30.565.10 349 516 8.4E-49 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 5.0E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 5.0E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 5.0E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 5.0E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Pfam PF01627 Hpt domain 826 907 5.2E-12 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Gene3D G3DSA:1.10.287.130 275 344 5.0E-20 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SUPERFAMILY SSF158472 191 240 1.27E-5 T 26-04-2016 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 SMART SM00073 817 913 1.1E-12 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20985 6e8161f233401922b677fd4d6c09bd68 925 Gene3D G3DSA:1.20.120.160 818 909 6.1E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 18 70 6.1E-10 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS02085 df6111029f4dde52187772528317b52c 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 86 272 2.8E-59 T 26-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PAM18_RS02085 df6111029f4dde52187772528317b52c 291 SUPERFAMILY SSF47757 7 85 2.88E-15 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 79 91 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 2.3E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 Gene3D G3DSA:1.10.155.10 6 84 2.3E-19 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS02085 df6111029f4dde52187772528317b52c 291 SUPERFAMILY SSF53335 87 275 1.25E-42 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PANTHER PTHR24422 1 289 6.5E-156 T 26-04-2016 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 PANTHER PTHR24422:SF13 1 289 6.5E-156 T 26-04-2016 PAM18_RS02085 df6111029f4dde52187772528317b52c 291 Gene3D G3DSA:3.40.50.150 85 278 7.8E-54 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02085 df6111029f4dde52187772528317b52c 291 SMART SM00138 17 283 7.9E-129 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 Pfam PF01584 CheW-like domain 15 151 2.0E-35 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.30.30.40 92 141 9.7E-5 T 26-04-2016 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 SUPERFAMILY SSF50341 13 153 1.07E-39 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 SMART SM00260 11 148 1.5E-41 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.40.50.180 53 91 1.6E-10 T 26-04-2016 PAM18_RS00895 4b9ff941a12f8c0834959ed2add950d4 161 PANTHER PTHR22617 14 161 3.5E-52 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF02540 NAD synthase 219 291 3.2E-8 T 26-04-2016 IPR022310 NAD/GMP synthase PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.5E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.5E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.5E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.92 T 26-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF52317 8 237 1.08E-53 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.40.50.620 223 399 1.1E-59 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 8.8E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 8.8E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 8.8E-5 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF54810 405 525 3.4E-49 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 5.1E-7 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 5.1E-7 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 5.1E-7 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.40.50.880 6 222 1.7E-58 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF00958 GMP synthase C terminal domain 433 524 8.4E-41 T 26-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 7.2E-77 T 26-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 5.7E-36 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 3.3E-149 T 26-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF52402 197 420 9.7E-59 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PANTHER PTHR11922:SF2 1 522 2.8E-285 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 PANTHER PTHR11922 1 522 2.8E-285 T 26-04-2016 PAM18_RS05935 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.30.300.10 401 525 1.3E-52 T 26-04-2016 PAM18_RS09010 4fd941852ed89d44b410bfbae164e103 214 SUPERFAMILY SSF159594 36 205 4.97E-44 T 26-04-2016 PAM18_RS09010 4fd941852ed89d44b410bfbae164e103 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 198 7.4E-26 T 26-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PAM18_RS09010 4fd941852ed89d44b410bfbae164e103 214 PANTHER PTHR36698:SF1 3 214 1.1E-101 T 26-04-2016 PAM18_RS09010 4fd941852ed89d44b410bfbae164e103 214 PANTHER PTHR36698 3 214 1.1E-101 T 26-04-2016 PAM18_RS09010 4fd941852ed89d44b410bfbae164e103 214 Gene3D G3DSA:3.40.50.10610 26 207 1.3E-60 T 26-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 142.529 T 26-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 PANTHER PTHR40279 1 249 1.4E-165 T 26-04-2016 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 PANTHER PTHR40279:SF2 1 249 1.4E-165 T 26-04-2016 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 241 3.4E-124 T 26-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 SUPERFAMILY SSF48613 2 248 9.34E-79 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 Gene3D G3DSA:1.20.910.10 4 247 2.5E-123 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS15675 29a781ee5f37ab997aa4367d8d18e1fe 250 Pfam PF03070 TENA/THI-4/PQQC family 14 222 1.7E-69 T 26-04-2016 IPR004305 Thiaminase-2/PQQC PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:3.40.50.2300 5 127 6.1E-22 T 26-04-2016 PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF109604 150 397 1.35E-37 T 26-04-2016 PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:1.10.3150.10 151 397 5.8E-31 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 PANTHER PTHR26402 8 189 4.1E-41 T 26-04-2016 PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 PANTHER PTHR26402:SF531 8 189 4.1E-41 T 26-04-2016 PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF52172 10 127 1.25E-22 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF08668 HDOD domain 162 348 9.2E-40 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 SMART SM00448 8 123 2.7E-14 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS01335 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF00072 Response regulator receiver domain 10 123 9.4E-13 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF52777 66 262 7.78E-17 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Pfam PF00550 Phosphopantetheine attachment site 1415 1458 2.6E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 541 938 5.6E-118 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Pfam PF00668 Condensation domain 67 361 6.0E-30 T 26-04-2016 IPR001242 Condensation domain PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.40.50.1820 1529 1637 4.5E-18 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.40.50.1820 1742 1793 4.5E-18 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PANTHER PTHR24096 434 980 0.0 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PANTHER PTHR24096 1361 1436 0.0 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Pfam PF08415 Nonribosomal peptide synthase 386 442 7.4E-17 T 26-04-2016 IPR013624 Non-ribosomal peptide synthetase PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Pfam PF08242 Methyltransferase domain 1162 1267 1.0E-8 T 26-04-2016 IPR013217 Methyltransferase type 12 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.40.50.150 1128 1276 3.2E-16 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF53335 1133 1315 2.82E-15 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1437 1452 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.40.50.980 515 665 4.7E-38 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Pfam PF00501 AMP-binding enzyme 521 915 3.8E-89 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF56801 506 968 3.43E-133 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF56801 1345 1425 3.43E-133 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF52777 250 492 4.78E-42 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.30.300.30 910 966 1.0E-27 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.30.300.30 1350 1417 1.0E-27 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PANTHER PTHR24096:SF119 434 980 0.0 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PANTHER PTHR24096:SF119 1361 1436 0.0 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:3.40.50.980 666 829 7.4E-41 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 ProSitePatterns PS00455 Putative AMP-binding domain signature. 657 668 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PRINTS PR00154 AMP-binding signature 664 672 5.83E-5 T 26-04-2016 IPR020459 AMP-binding PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 PRINTS PR00154 AMP-binding signature 652 663 5.83E-5 T 26-04-2016 IPR020459 AMP-binding PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:1.10.1200.10 1418 1490 4.6E-19 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 Gene3D G3DSA:2.30.38.10 830 905 3.0E-24 T 26-04-2016 PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF53474 1520 1796 4.64E-22 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03645 825cab6cb354714aaaed86010c4d93f6 1809 SUPERFAMILY SSF47336 1407 1484 7.33E-12 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS10805 55da9863680e6fc9fe3728628763298a 201 SUPERFAMILY SSF52266 23 200 3.21E-48 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS10805 55da9863680e6fc9fe3728628763298a 201 Gene3D G3DSA:3.40.50.1110 22 200 2.6E-53 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS10805 55da9863680e6fc9fe3728628763298a 201 PANTHER PTHR30383 1 198 1.2E-45 T 26-04-2016 PAM18_RS10805 55da9863680e6fc9fe3728628763298a 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 182 1.5E-23 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS27650 b69749103bfb67bb845d91e3afeaee2a 661 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 496 8.9E-200 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS27650 b69749103bfb67bb845d91e3afeaee2a 661 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 497 2.3E-163 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS27650 b69749103bfb67bb845d91e3afeaee2a 661 PANTHER PTHR30047:SF2 8 661 0.0 T 26-04-2016 PAM18_RS27650 b69749103bfb67bb845d91e3afeaee2a 661 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 26-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS27650 b69749103bfb67bb845d91e3afeaee2a 661 PANTHER PTHR30047 8 661 0.0 T 26-04-2016 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Gene3D G3DSA:3.40.50.300 314 531 3.9E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Gene3D G3DSA:3.40.50.300 2 267 9.5E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 PANTHER PTHR19211:SF45 545 583 1.9E-238 T 26-04-2016 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 PANTHER PTHR19211:SF45 1 525 1.9E-238 T 26-04-2016 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 3 94 2.88E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 123 233 2.88E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF12848 ABC transporter 221 299 4.9E-10 T 26-04-2016 IPR032781 ABC-transporter extension domain PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF16326 ABC transporter C-terminal domain 571 639 6.3E-19 T 26-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 306 528 1.49E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF00005 ABC transporter 19 182 2.5E-22 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF00005 ABC transporter 334 467 8.2E-24 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 SMART SM00382 28 227 4.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 SMART SM00382 342 512 7.8E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 PANTHER PTHR19211 545 583 1.9E-238 T 26-04-2016 PAM18_RS09975 9ca151844b6181f6e055aafdc7937be5 640 PANTHER PTHR19211 1 525 1.9E-238 T 26-04-2016 PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 Pfam PF00350 Dynamin family 59 273 2.4E-12 T 26-04-2016 IPR022812 Dynamin superfamily PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 Gene3D G3DSA:3.40.50.300 206 316 1.2E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 Gene3D G3DSA:3.40.50.300 119 146 1.2E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 Gene3D G3DSA:3.40.50.300 59 77 1.2E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 SUPERFAMILY SSF52540 44 113 2.27E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01975 6fe444a520d5210280eac6e9c8054b5f 655 SUPERFAMILY SSF52540 187 318 2.27E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PANTHER PTHR22617:SF28 1501 1900 0.0 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PANTHER PTHR22617:SF28 1968 2334 0.0 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:2.30.30.40 2273 2315 1.2E-19 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:2.30.30.40 2176 2197 1.2E-19 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2039 2175 7.1E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 433 556 1.94E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM01231 1851 1990 1.3E-11 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF55874 1992 2173 7.99E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:3.30.565.10 1992 2174 1.7E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 1362 1484 1.83E-27 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00260 2168 2318 2.0E-34 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00448 2351 2464 2.9E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 1184 1304 1.91E-15 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2160 2173 1.5E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2080 2094 1.5E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2136 2154 1.5E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.10.287.560 1966 1991 1.3E-4 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.10.287.560 1852 1886 1.3E-4 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 1670 1778 4.19E-20 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 7 130 1.83E-23 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 1041 1164 4.84E-19 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00073 1669 1766 6.4E-4 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00073 864 961 3.8E-6 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00073 1041 1144 0.49 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00073 1522 1619 0.0095 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00073 1362 1459 6.6E-7 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 1522 1644 1.83E-26 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01584 CheW-like domain 2181 2320 8.8E-23 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF50341 2175 2314 1.7E-21 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 1671 1764 3.6E-15 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 1364 1457 6.1E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 866 953 1.4E-13 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 1524 1623 4.2E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 1043 1129 2.3E-11 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 1186 1277 1.3E-4 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF01627 Hpt domain 10 98 2.7E-8 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SMART SM00387 2035 2176 1.3E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 1668 1827 2.8E-23 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 1183 1316 1.2E-17 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 10 142 1.5E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 1361 1498 2.1E-33 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 1520 1653 1.7E-31 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 863 999 8.5E-33 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:1.20.120.160 1041 1169 1.9E-19 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF52172 2350 2469 3.98E-36 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Gene3D G3DSA:3.40.50.2300 2346 2471 1.3E-37 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PANTHER PTHR22617 1501 1900 0.0 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 PANTHER PTHR22617 1968 2334 0.0 T 26-04-2016 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 Pfam PF00072 Response regulator receiver domain 2353 2465 1.4E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02090 50bf6db8175fce0bc452ba156f2680eb 2472 SUPERFAMILY SSF47226 864 989 4.6E-27 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 Gene3D G3DSA:2.60.120.10 214 350 4.9E-25 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 Gene3D G3DSA:2.60.120.10 42 204 3.3E-48 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 Pfam PF07883 Cupin domain 93 164 1.3E-24 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 9 348 6.4E-163 T 26-04-2016 IPR011960 Gentisate 1,2-dioxygenase PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 PANTHER PTHR41517:SF1 1 353 1.1E-122 T 26-04-2016 PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 SUPERFAMILY SSF51182 6 346 2.07E-117 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS13230 9dd79ec975533204350ce4bf914e1549 353 PANTHER PTHR41517 1 353 1.1E-122 T 26-04-2016 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.3E-21 T 26-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.30.30.30 1 62 2.4E-23 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 129 186 1.0E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 65 128 1.67E-12 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 SMART SM01185 67 122 3.1E-14 T 26-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 PIRSF PIRSF005901 1 187 3.3E-57 T 26-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-21 T 26-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 8.5E-61 T 26-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 130 186 6.17E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 65 128 2.0E-16 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 48.49 T 26-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50104 1 62 5.48E-17 T 26-04-2016 IPR008991 Translation protein SH3-like domain PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 7.6E-13 T 26-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 PANTHER PTHR30053 1 187 4.1E-71 T 26-04-2016 PAM18_RS10835 a7647a1e398569b18378d94138760b73 188 SMART SM00841 130 185 7.5E-25 T 26-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:1.10.10.10 1 84 7.0E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 PANTHER PTHR30346:SF0 1 285 3.4E-102 T 26-04-2016 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 PANTHER PTHR30346 1 285 3.4E-102 T 26-04-2016 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 172 264 2.2E-37 T 26-04-2016 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-23 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF53850 86 285 1.49E-32 T 26-04-2016 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF46785 1 86 2.64E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 88 171 1.5E-29 T 26-04-2016 PAM18_RS13035 86590bb891f63361d905949bc28225c7 290 Pfam PF03466 LysR substrate binding domain 86 287 1.9E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Pfam PF03466 LysR substrate binding domain 98 301 5.1E-26 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Gene3D G3DSA:3.40.190.10 180 272 6.5E-16 T 26-04-2016 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Gene3D G3DSA:3.40.190.10 279 307 2.1E-24 T 26-04-2016 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Gene3D G3DSA:3.40.190.10 94 179 2.1E-24 T 26-04-2016 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 2.1E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 PANTHER PTHR30118 1 307 2.4E-129 T 26-04-2016 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 SUPERFAMILY SSF53850 94 300 2.17E-31 T 26-04-2016 PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 SUPERFAMILY SSF46785 8 87 3.24E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 Gene3D G3DSA:1.10.10.10 6 87 1.4E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01360 5e9dd74c67f394ee77147f3c9045354a 310 PANTHER PTHR30118:SF4 1 307 2.4E-129 T 26-04-2016 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 Gene3D G3DSA:3.40.50.620 95 211 3.4E-11 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 283 358 1.1E-23 T 26-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 SUPERFAMILY SSF52402 95 219 1.26E-19 T 26-04-2016 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 Gene3D G3DSA:3.40.50.1220 277 396 2.2E-37 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 SMART SM00893 95 269 1.1E-5 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 PANTHER PTHR10909:SF309 245 395 4.9E-15 T 26-04-2016 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 PANTHER PTHR10909 245 395 4.9E-15 T 26-04-2016 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 Pfam PF01012 Electron transfer flavoprotein domain 101 244 1.0E-15 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS28220 629aeab5e8899d54e3751852fd7fefdf 410 SUPERFAMILY SSF52467 281 396 1.96E-33 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS17050 c2e892508822abf3fed4a9f28ac28425 143 Pfam PF09025 YopR, type III needle-polymerisation regulator 54 142 5.0E-22 T 26-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 PAM18_RS17050 c2e892508822abf3fed4a9f28ac28425 143 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 16 141 8.8E-48 T 26-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 PAM18_RS17050 c2e892508822abf3fed4a9f28ac28425 143 SUPERFAMILY SSF140591 24 123 1.06E-27 T 26-04-2016 PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 192 1.9E-8 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 7.0E-17 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 Gene3D G3DSA:3.40.30.10 1 79 1.4E-31 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 PANTHER PTHR11260:SF178 2 201 1.8E-87 T 26-04-2016 PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 PANTHER PTHR11260 2 201 1.8E-87 T 26-04-2016 PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 Gene3D G3DSA:1.20.1050.10 80 196 1.4E-46 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 SUPERFAMILY SSF52833 1 83 4.94E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS17550 920d3041ebd657d9eda559d4a9dba81e 220 SUPERFAMILY SSF47616 74 197 7.94E-34 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS01825 017f748384755b133aef000d940ba85c 83 PANTHER PTHR24960 1 77 3.8E-30 T 26-04-2016 PAM18_RS01825 017f748384755b133aef000d940ba85c 83 SUPERFAMILY SSF54862 5 76 1.08E-19 T 26-04-2016 PAM18_RS01825 017f748384755b133aef000d940ba85c 83 Pfam PF00037 4Fe-4S binding domain 5 25 3.2E-6 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS01825 017f748384755b133aef000d940ba85c 83 PANTHER PTHR24960:SF38 1 77 3.8E-30 T 26-04-2016 PAM18_RS01825 017f748384755b133aef000d940ba85c 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS01825 017f748384755b133aef000d940ba85c 83 Gene3D G3DSA:3.30.70.20 6 75 2.1E-18 T 26-04-2016 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 234 303 6.2E-17 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 303 3.1E-65 T 26-04-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 Gene3D G3DSA:2.30.330.10 228 307 5.4E-21 T 26-04-2016 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 PANTHER PTHR22617:SF34 14 308 6.2E-173 T 26-04-2016 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 SUPERFAMILY SSF101801 232 308 1.7E-18 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 280 297 3.9E-8 T 26-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 3.9E-8 T 26-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 236 248 3.9E-8 T 26-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 PAM18_RS17185 214de761fd28004312dfe6888cc4e84b 309 PANTHER PTHR22617 14 308 6.2E-173 T 26-04-2016 PAM18_RS14310 f26ca9106a63c884cc652dfcf890f852 291 PANTHER PTHR10696:SF26 36 277 1.7E-156 T 26-04-2016 PAM18_RS14310 f26ca9106a63c884cc652dfcf890f852 291 PANTHER PTHR10696 36 277 1.7E-156 T 26-04-2016 PAM18_RS14310 f26ca9106a63c884cc652dfcf890f852 291 Gene3D G3DSA:3.60.130.10 38 278 6.3E-44 T 26-04-2016 PAM18_RS14310 f26ca9106a63c884cc652dfcf890f852 291 SUPERFAMILY SSF51197 22 277 2.24E-54 T 26-04-2016 PAM18_RS14310 f26ca9106a63c884cc652dfcf890f852 291 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 43 275 2.4E-38 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 SUPERFAMILY SSF56003 14 249 1.12E-50 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 25 194 1.9E-17 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 679 1.0E-15 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 320 560 3.4E-30 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Gene3D G3DSA:3.30.365.10 557 724 3.0E-43 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Gene3D G3DSA:3.90.1170.50 194 292 7.3E-23 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 PANTHER PTHR11908 124 720 0.0 T 26-04-2016 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 PIRSF PIRSF036389 6 731 1.5E-268 T 26-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 PANTHER PTHR11908:SF79 124 720 0.0 T 26-04-2016 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Gene3D G3DSA:3.30.365.10 25 193 4.3E-40 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 Gene3D G3DSA:3.30.365.10 390 556 3.1E-35 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 SMART SM01008 216 294 3.3E-23 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS16200 f3ef44f7e8f2ec7887b1f85562a15472 731 SUPERFAMILY SSF56003 318 724 2.62E-117 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS02330 0a1a7c10c1c50386b061132233bb9c44 295 PANTHER PTHR10983 1 293 1.5E-145 T 26-04-2016 PAM18_RS02330 0a1a7c10c1c50386b061132233bb9c44 295 PANTHER PTHR10983:SF15 1 293 1.5E-145 T 26-04-2016 PAM18_RS02330 0a1a7c10c1c50386b061132233bb9c44 295 SUPERFAMILY SSF69593 8 293 9.81E-58 T 26-04-2016 PAM18_RS02330 0a1a7c10c1c50386b061132233bb9c44 295 SMART SM00563 85 227 1.0E-19 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS02330 0a1a7c10c1c50386b061132233bb9c44 295 Pfam PF01553 Acyltransferase 73 226 5.8E-15 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 PANTHER PTHR10314 3 321 4.2E-156 T 26-04-2016 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 PANTHER PTHR10314:SF110 3 321 4.2E-156 T 26-04-2016 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 313 2.5E-131 T 26-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 302 6.5E-67 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 151 318 6.0E-73 T 26-04-2016 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 3 42 6.0E-73 T 26-04-2016 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 26-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 43 144 4.3E-40 T 26-04-2016 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 313 1.4E-136 T 26-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PAM18_RS11635 3aaa83da5f7ab17846598c2964c84fe9 324 SUPERFAMILY SSF53686 6 312 2.23E-98 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Pfam PF01636 Phosphotransferase enzyme family 32 260 2.8E-38 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 PANTHER PTHR39573 1 324 3.7E-188 T 26-04-2016 PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 PANTHER PTHR39573:SF1 1 324 3.7E-188 T 26-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Hamap MF_01497 Stress response kinase A [srkA]. 1 317 48.358 T 26-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 Gene3D G3DSA:3.90.1200.10 103 322 1.9E-44 T 26-04-2016 PAM18_RS02460 52dbdaaac9a6f195dbb898f58bc9a1d4 324 SUPERFAMILY SSF56112 1 322 1.25E-86 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 PANTHER PTHR10422:SF23 22 159 9.6E-94 T 26-04-2016 PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 179 2.7E-84 T 26-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 PANTHER PTHR10422 22 159 9.6E-94 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 Gene3D G3DSA:1.10.760.10 15 195 1.5E-37 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 178 8.2E-86 T 26-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PAM18_RS17885 1776b5d56bb0b0baa8c165a2b0241b2b 202 SUPERFAMILY SSF46626 15 192 7.07E-31 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 SUPERFAMILY SSF89095 4 148 1.26E-35 T 26-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 PANTHER PTHR28055 1 149 4.0E-47 T 26-04-2016 PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.10.410 92 148 9.1E-19 T 26-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.1510.10 4 91 1.2E-26 T 26-04-2016 PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 PANTHER PTHR28055:SF1 1 149 4.0E-47 T 26-04-2016 PAM18_RS02930 ba995d2ecf682c50e1c24b0e58bd431b 149 Pfam PF09424 Yqey-like protein 5 147 3.7E-49 T 26-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 SUPERFAMILY SSF53850 25 299 9.06E-69 T 26-04-2016 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 296 3.0E-68 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 Gene3D G3DSA:3.40.190.120 126 237 1.1E-32 T 26-04-2016 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 PANTHER PTHR30177:SF9 24 300 5.8E-125 T 26-04-2016 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 Gene3D G3DSA:3.40.190.10 244 300 2.1E-55 T 26-04-2016 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 Gene3D G3DSA:3.40.190.10 22 125 2.1E-55 T 26-04-2016 PAM18_RS05340 808a1f3f26d271dfa81360f428dec77e 311 PANTHER PTHR30177 24 300 5.8E-125 T 26-04-2016 PAM18_RS08825 3d37482b29782e5c696d37e6b0e72079 269 Gene3D G3DSA:3.40.720.10 3 229 2.1E-35 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS08825 3d37482b29782e5c696d37e6b0e72079 269 SUPERFAMILY SSF53649 2 255 7.29E-50 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS08825 3d37482b29782e5c696d37e6b0e72079 269 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 1.1E-15 T 26-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 PANTHER PTHR11601 43 423 9.4E-95 T 26-04-2016 PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 SUPERFAMILY SSF53383 40 423 4.4E-67 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 Pfam PF00266 Aminotransferase class-V 65 387 3.5E-30 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 Gene3D G3DSA:3.90.1150.10 318 423 2.7E-13 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 255 275 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 Gene3D G3DSA:3.40.640.10 65 317 4.1E-43 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS13615 53552d26abbfb83ddcef0b8b7874180c 427 PANTHER PTHR11601:SF17 43 423 9.4E-95 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 277 333 2.2E-28 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82866 299 499 2.75E-50 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82714 185 274 8.37E-21 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 683 734 5.49E-25 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 3.4E-94 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PANTHER PTHR32063:SF11 1 1062 0.0 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:3.30.70.1430 41 141 5.2E-31 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 41 134 4.19E-25 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 138 184 2.2E-28 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 576 682 2.14E-27 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:3.30.70.1430 580 682 9.7E-30 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 PANTHER PTHR32063 1 1062 0.0 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82693 821 870 5.49E-25 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:3.30.2090.10 184 277 6.7E-27 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:3.30.2090.10 735 823 6.1E-24 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82714 735 820 2.35E-20 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 26-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:1.10.3850.10 285 501 2.0E-60 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Gene3D G3DSA:1.10.3850.10 827 1041 2.1E-59 T 26-04-2016 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 Pfam PF00873 AcrB/AcrD/AcrF family 3 1040 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS13115 707b22c7079ac8c5f3d6fd187412a3c7 1062 SUPERFAMILY SSF82866 844 1040 3.01E-46 T 26-04-2016 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 7.0E-47 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 328 2.1E-25 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 SUPERFAMILY SSF52518 364 563 1.61E-52 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 PANTHER PTHR18968 4 589 2.5E-301 T 26-04-2016 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Gene3D G3DSA:3.40.50.1220 194 346 4.7E-38 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 SUPERFAMILY SSF52467 189 356 2.45E-38 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 SUPERFAMILY SSF52518 4 175 7.31E-50 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 PANTHER PTHR18968:SF124 4 589 2.5E-301 T 26-04-2016 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 5.4E-27 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Gene3D G3DSA:3.40.50.970 357 568 9.0E-53 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15060 d8d30f1664ab9c5c6631d2c592a8bba4 590 Gene3D G3DSA:3.40.50.970 2 174 1.4E-60 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 PANTHER PTHR11102 49 175 2.7E-49 T 26-04-2016 PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 PANTHER PTHR11102 199 259 2.7E-49 T 26-04-2016 PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Pfam PF08238 Sel1 repeat 129 164 1.6E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Pfam PF08238 Sel1 repeat 94 128 8.9E-10 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Pfam PF08238 Sel1 repeat 67 91 1.4 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Pfam PF08238 Sel1 repeat 217 251 2.4E-4 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Pfam PF08238 Sel1 repeat 200 216 0.02 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 Gene3D G3DSA:1.25.40.10 52 264 1.6E-48 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SUPERFAMILY SSF81901 196 259 1.44E-11 T 26-04-2016 PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SUPERFAMILY SSF81901 52 177 2.49E-30 T 26-04-2016 PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SMART SM00671 165 216 91.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SMART SM00671 93 128 2.9E-10 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SMART SM00671 61 92 20.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SMART SM00671 217 252 2.8E-4 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS01815 323168f3e463f1b1f98f37f012f1ce8d 328 SMART SM00671 129 164 1.7E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS21035 3c395c0a07d0aa130ac5ea759529cb93 427 Gene3D G3DSA:3.40.50.1820 229 406 5.2E-9 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS21035 3c395c0a07d0aa130ac5ea759529cb93 427 Pfam PF06057 Bacterial virulence protein (VirJ) 232 421 2.0E-81 T 26-04-2016 IPR010333 Bacterial virulence PAM18_RS21035 3c395c0a07d0aa130ac5ea759529cb93 427 PIRSF PIRSF029063 3 426 4.6E-155 T 26-04-2016 IPR011225 Type IV secretory pathway, VirJ component PAM18_RS21035 3c395c0a07d0aa130ac5ea759529cb93 427 SUPERFAMILY SSF53474 220 407 2.39E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 SMART SM01321 9 125 6.9E-44 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 Pfam PF01797 Transposase IS200 like 11 123 7.1E-17 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 PANTHER PTHR34322:SF1 2 233 3.9E-39 T 26-04-2016 PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 PANTHER PTHR34322 2 233 3.9E-39 T 26-04-2016 PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 Gene3D G3DSA:3.30.70.1290 3 128 1.4E-17 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS00215 418f10445647c24aedf268b11c2e734a 233 SUPERFAMILY SSF143422 3 128 3.01E-31 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 61 79 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 26 42 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 339 352 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 266 281 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 121 133 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 249 264 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 155 166 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 192 219 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PRINTS PR00992 Alanine racemase signature 287 304 3.9E-63 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 8.6E-62 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.2E-38 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PANTHER PTHR30511:SF0 1 356 7.5E-154 T 26-04-2016 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 Gene3D G3DSA:2.40.37.10 210 357 4.0E-55 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 SUPERFAMILY SSF50621 227 357 4.19E-47 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 Hamap MF_01201 Alanine racemase. 1 357 35.201 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 SMART SM01005 233 357 2.3E-67 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 PANTHER PTHR30511 1 356 7.5E-154 T 26-04-2016 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 SUPERFAMILY SSF51419 8 234 1.83E-69 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 Gene3D G3DSA:3.20.20.10 10 209 8.1E-66 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 26-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS25795 f697dca3a7c9a9b59ea1e58fdb76e258 358 TIGRFAM TIGR00492 alr: alanine racemase 4 356 2.0E-104 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 PIRSF PIRSF029792 1 336 1.6E-116 T 26-04-2016 IPR008794 Proline racemase family PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 Pfam PF05544 Proline racemase 9 334 2.1E-139 T 26-04-2016 IPR008794 Proline racemase family PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 Gene3D G3DSA:3.10.310.10 1 154 2.6E-54 T 26-04-2016 PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 PANTHER PTHR33442 1 336 1.2E-191 T 26-04-2016 PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 PANTHER PTHR33442:SF2 1 336 1.2E-191 T 26-04-2016 PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 Gene3D G3DSA:3.10.310.10 155 322 1.0E-60 T 26-04-2016 PAM18_RS19310 f4dc1e58cb1755e5e54d2079fd7540e6 344 SUPERFAMILY SSF54506 1 333 8.63E-109 T 26-04-2016 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 Gene3D G3DSA:3.40.640.10 48 317 1.9E-104 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 Pfam PF00155 Aminotransferase class I and II 30 394 1.1E-76 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.1E-38 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 7.1E-38 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 7.1E-38 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.1E-38 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PANTHER PTHR11879 1 397 8.2E-256 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 PANTHER PTHR11879:SF11 1 397 8.2E-256 T 26-04-2016 PAM18_RS09350 72c9a8013f32f29d92346a1747a20d18 398 SUPERFAMILY SSF53383 1 398 2.61E-115 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01464 Transglycosylase SLT domain 131 230 4.2E-25 T 26-04-2016 IPR008258 Transglycosylase SLT domain 1 PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 140 168 - T 26-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 486 526 6.6E-8 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 421 462 4.0E-13 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 351 393 2.8E-12 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 349 393 3.79E-11 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 348 394 4.7E-17 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 483 528 1.0E-15 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 419 463 1.3E-18 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF06474 MltD lipid attachment motif 1 34 1.1E-15 T 26-04-2016 IPR010511 Lytic murein transglycosylase D , lipid attachment domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF53955 120 279 1.13E-41 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 PANTHER PTHR21666 70 462 1.7E-190 T 26-04-2016 PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 420 462 1.44E-11 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 420 463 3.2E-15 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 485 528 2.2E-8 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 350 393 8.3E-14 T 26-04-2016 IPR018392 LysM domain PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:1.10.530.10 117 278 2.0E-47 T 26-04-2016 PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 PANTHER PTHR21666:SF206 70 462 1.7E-190 T 26-04-2016 PAM18_RS16555 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 484 528 1.83E-10 T 26-04-2016 IPR018392 LysM domain PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 PANTHER PTHR30024:SF13 4 424 5.1E-215 T 26-04-2016 PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 44 121 4.9E-9 T 26-04-2016 PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 258 319 4.9E-9 T 26-04-2016 PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 PANTHER PTHR30024 4 424 5.1E-215 T 26-04-2016 PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 122 257 7.1E-16 T 26-04-2016 PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 Pfam PF16868 NMT1-like family 46 319 2.2E-20 T 26-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PAM18_RS05530 0aa80802092e3fdef38eec9d4790df77 451 SUPERFAMILY SSF53850 41 319 5.02E-41 T 26-04-2016 PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 SUPERFAMILY SSF52402 1 138 5.11E-29 T 26-04-2016 PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 PANTHER PTHR31964 1 138 1.3E-27 T 26-04-2016 PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 Gene3D G3DSA:3.40.50.620 1 138 4.1E-31 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 PANTHER PTHR31964:SF26 1 138 1.3E-27 T 26-04-2016 PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 Pfam PF00582 Universal stress protein family 1 138 5.4E-28 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 PRINTS PR01438 Universal stress protein signature 118 140 4.9E-9 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 PRINTS PR01438 Universal stress protein signature 2 20 4.9E-9 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS10925 8366ad20ed9edb9a0aa565d3c5cbc2ed 148 PRINTS PR01438 Universal stress protein signature 100 112 4.9E-9 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 5.2E-5 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 5.2E-5 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 Pfam PF00158 Sigma-54 interaction domain 140 305 2.3E-71 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 Pfam PF02954 Bacterial regulatory protein, Fis family 403 435 1.9E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 Gene3D G3DSA:3.40.50.300 136 311 4.0E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 SUPERFAMILY SSF52540 139 380 4.76E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 PANTHER PTHR32071:SF34 1 441 1.8E-265 T 26-04-2016 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 Gene3D G3DSA:1.10.8.60 312 386 3.0E-23 T 26-04-2016 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 SUPERFAMILY SSF46689 352 441 5.63E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 Gene3D G3DSA:1.10.10.60 402 437 8.8E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 SMART SM00382 159 303 1.1E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15890 e31956e09165ea501091c079e97f24ef 442 PANTHER PTHR32071 1 441 1.8E-265 T 26-04-2016 PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 26-04-2016 IPR022927 RNA pyrophosphohydrolase RppH PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-6 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-6 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 Pfam PF00293 NUDIX domain 7 146 8.7E-26 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 PANTHER PTHR23114 1 152 9.1E-54 T 26-04-2016 PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 SUPERFAMILY SSF55811 4 154 1.76E-29 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS01695 49f0f22881f30d9fd8e06a20036e09ad 159 Gene3D G3DSA:3.90.79.10 4 151 1.5E-29 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 92 2.1E-13 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 SUPERFAMILY SSF46626 9 111 7.9E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 Gene3D G3DSA:2.140.10.20 234 480 2.1E-62 T 26-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 Gene3D G3DSA:1.10.760.10 14 97 2.6E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 SUPERFAMILY SSF51004 102 485 5.62E-90 T 26-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 Pfam PF02239 Cytochrome D1 heme domain 129 484 2.8E-149 T 26-04-2016 PAM18_RS02575 ad26e72ce1bca77142f0b4499183729d 493 Gene3D G3DSA:2.130.10.10 133 233 1.3E-11 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS06175 b2c98b6fd78942ec0740675da7882d3f 230 Gene3D G3DSA:3.30.870.10 90 227 6.2E-33 T 26-04-2016 PAM18_RS06175 b2c98b6fd78942ec0740675da7882d3f 230 SUPERFAMILY SSF56024 91 226 4.71E-31 T 26-04-2016 PAM18_RS06175 b2c98b6fd78942ec0740675da7882d3f 230 PANTHER PTHR21248 12 229 3.3E-49 T 26-04-2016 PAM18_RS06175 b2c98b6fd78942ec0740675da7882d3f 230 Pfam PF13091 PLD-like domain 103 224 5.9E-28 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PANTHER PTHR12128:SF34 1 291 5.8E-150 T 26-04-2016 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.5E-109 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PIRSF PIRSF001365 1 292 1.9E-100 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 SUPERFAMILY SSF51569 2 289 3.87E-107 T 26-04-2016 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 Gene3D G3DSA:3.20.20.70 1 291 3.9E-125 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 26-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 69.373 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 SMART SM01130 1 289 1.5E-151 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.9E-35 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.9E-35 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.9E-35 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.9E-35 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 26-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 PANTHER PTHR12128 1 291 5.8E-150 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS20615 a690f3e6c6bcced61a82ee4278ce937e 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 9.8E-116 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 19 236 9.8E-51 T 26-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 PIRSF PIRSF000857 4 241 6.4E-81 T 26-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 SUPERFAMILY SSF52402 9 199 1.37E-46 T 26-04-2016 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 34 211 1.1E-47 T 26-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 PANTHER PTHR23293:SF11 6 240 5.5E-114 T 26-04-2016 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 Gene3D G3DSA:3.40.50.620 7 207 6.9E-53 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 40 235 1.0E-86 T 26-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 237 36.123 T 26-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 PAM18_RS16875 97568aa2cfc8fd3960d1203c0cb259c0 244 PANTHER PTHR23293 6 240 5.5E-114 T 26-04-2016 PAM18_RS20765 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 PANTHER PTHR30558 1 146 6.1E-65 T 26-04-2016 PAM18_RS20765 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 144 7.0E-30 T 26-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PAM18_RS20765 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 TIGRFAM TIGR02801 tolR: protein TolR 11 144 2.4E-46 T 26-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 PAM18_RS20765 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 PANTHER PTHR30558:SF7 1 146 6.1E-65 T 26-04-2016 PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 SUPERFAMILY SSF52096 12 265 7.47E-85 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 Gene3D G3DSA:3.90.226.10 12 207 9.3E-67 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 PANTHER PTHR11941 1 264 1.3E-101 T 26-04-2016 PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 PANTHER PTHR11941:SF54 1 264 1.3E-101 T 26-04-2016 PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 264 1.6E-68 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS07175 9fe6c5b1ac362546ee866cab50cb2525 267 Gene3D G3DSA:1.10.12.10 210 266 3.9E-22 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 4.0E-29 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.9E-29 T 26-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.9E-17 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.9E-17 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.9E-17 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PIRSF PIRSF004669 1 89 3.1E-30 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PANTHER PTHR34040:SF2 1 89 2.0E-40 T 26-04-2016 PAM18_RS18850 fc545aa330fc1afe2e79346775eb5e5e 89 PANTHER PTHR34040 1 89 2.0E-40 T 26-04-2016 PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 PANTHER PTHR21343 6 485 3.5E-237 T 26-04-2016 PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 SUPERFAMILY SSF52540 6 240 2.92E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 SUPERFAMILY SSF52317 254 447 5.77E-42 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 Gene3D G3DSA:3.40.50.880 253 448 1.4E-31 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 216.094 T 26-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 478 1.9E-150 T 26-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 229 3.2E-28 T 26-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 437 1.0E-58 T 26-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 Gene3D G3DSA:3.40.50.300 6 239 6.9E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19190 d9d6be6b2d8f93f09c0633b9226c019a 490 PANTHER PTHR21343:SF1 6 485 3.5E-237 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 SUPERFAMILY SSF56719 35 487 1.19E-155 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 SUPERFAMILY SSF101904 501 750 5.49E-53 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Gene3D G3DSA:3.90.199.10 337 401 9.7E-105 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Gene3D G3DSA:3.90.199.10 34 241 9.7E-105 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 PANTHER PTHR10169 1 527 0.0 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 SMART SM00434 15 465 6.0E-230 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Gene3D G3DSA:3.30.1360.40 242 335 2.3E-24 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Gene3D G3DSA:2.120.10.90 500 740 7.9E-25 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 34.13 T 26-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 PANTHER PTHR10169:SF30 1 527 0.0 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.8E-132 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 26-04-2016 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 689 2.9E-5 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25975 333d0d5fb45093bda9f3b2ce1f09bf46 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 643 0.0061 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 Pfam PF00795 Carbon-nitrogen hydrolase 6 266 4.4E-53 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 SUPERFAMILY SSF56317 3 283 8.76E-84 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 PANTHER PTHR23088:SF11 1 286 2.5E-155 T 26-04-2016 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 Gene3D G3DSA:3.60.110.10 3 283 8.7E-95 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 PANTHER PTHR23088 1 286 2.5E-155 T 26-04-2016 PAM18_RS01465 591ee3aba32d0d994c122ff495812d6e 292 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.8E-147 T 26-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 SUPERFAMILY SSF46689 16 90 9.71E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 PANTHER PTHR30055 10 204 4.5E-40 T 26-04-2016 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 Gene3D G3DSA:1.10.357.10 25 206 8.7E-32 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 4.3E-15 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 PANTHER PTHR30055:SF92 10 204 4.5E-40 T 26-04-2016 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.1E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19065 15f0ea3c9a485a9a8f3bc5a8e8428e9f 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.1E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 Gene3D G3DSA:3.40.190.10 88 182 2.0E-21 T 26-04-2016 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 SUPERFAMILY SSF53850 86 281 4.75E-30 T 26-04-2016 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 PANTHER PTHR30126:SF30 1 281 7.5E-141 T 26-04-2016 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 Gene3D G3DSA:3.40.190.10 183 256 5.1E-8 T 26-04-2016 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 8.2E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 PANTHER PTHR30126 1 281 7.5E-141 T 26-04-2016 PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 Pfam PF03466 LysR substrate binding domain 85 281 8.0E-36 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 Gene3D G3DSA:1.10.10.10 1 84 1.0E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03755 d911b1a3599e6b987e61f3ea4600bfce 284 SUPERFAMILY SSF46785 1 84 8.39E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05130 0f2c79ea9bc668d03849954a5aa6ceed 488 PIRSF PIRSF006446 2 464 9.8E-234 T 26-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PAM18_RS05130 0f2c79ea9bc668d03849954a5aa6ceed 488 PANTHER PTHR30365:SF8 1 458 2.3E-296 T 26-04-2016 PAM18_RS05130 0f2c79ea9bc668d03849954a5aa6ceed 488 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 439 6.1E-169 T 26-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PAM18_RS05130 0f2c79ea9bc668d03849954a5aa6ceed 488 PANTHER PTHR30365 1 458 2.3E-296 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Pfam PF01568 Molydopterin dinucleotide binding domain 591 700 4.2E-28 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:3.40.50.740 322 344 1.2E-70 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:3.40.50.740 66 138 1.2E-70 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:3.40.50.740 378 517 1.2E-70 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:2.20.25.90 6 56 2.3E-20 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 26-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:2.40.40.20 542 706 2.6E-47 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 SUPERFAMILY SSF53706 6 499 1.18E-197 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 438 455 - T 26-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 56 7.8E-18 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 SMART SM00926 7 60 2.2E-19 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 PANTHER PTHR11615:SF119 4 725 6.8E-288 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Gene3D G3DSA:3.40.228.10 140 321 4.9E-65 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Pfam PF04324 BFD-like [2Fe-2S] binding domain 853 899 6.1E-9 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 PANTHER PTHR11615 4 725 6.8E-288 T 26-04-2016 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 Pfam PF00384 Molybdopterin oxidoreductase 79 492 5.7E-84 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS16755 72b70f12e13c36c64cecbd3726a908c4 908 SUPERFAMILY SSF50692 562 706 9.49E-42 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.9E-231 T 26-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 1.9E-84 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Gene3D G3DSA:3.40.47.10 188 271 1.6E-62 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Gene3D G3DSA:3.40.47.10 7 130 1.6E-62 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 SUPERFAMILY SSF53901 266 390 2.88E-42 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 PIRSF PIRSF000429 2 391 4.1E-132 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-134 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Gene3D G3DSA:3.40.47.10 272 390 1.3E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Gene3D G3DSA:3.40.47.10 145 187 1.3E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 PANTHER PTHR18919 3 391 7.9E-199 T 26-04-2016 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 SUPERFAMILY SSF53901 4 262 1.28E-78 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.992 T 26-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.1E-47 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS10005 26630f2ff88bda02d6acbfc9c92e4550 391 PANTHER PTHR18919:SF69 3 391 7.9E-199 T 26-04-2016 PAM18_RS17935 dcf64c2e19987f934f97f95243b89b51 69 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 1.2E-21 T 26-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PAM18_RS17935 dcf64c2e19987f934f97f95243b89b51 69 PANTHER PTHR41532 2 69 9.8E-25 T 26-04-2016 PAM18_RS17935 dcf64c2e19987f934f97f95243b89b51 69 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 2.9E-17 T 26-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type PAM18_RS19430 97a2b196fcccd94afe15d37d34fda698 679 PANTHER PTHR30509:SF1 318 654 2.7E-154 T 26-04-2016 PAM18_RS19430 97a2b196fcccd94afe15d37d34fda698 679 PANTHER PTHR30509:SF1 9 260 2.7E-154 T 26-04-2016 PAM18_RS19430 97a2b196fcccd94afe15d37d34fda698 679 PANTHER PTHR30509 318 654 2.7E-154 T 26-04-2016 PAM18_RS19430 97a2b196fcccd94afe15d37d34fda698 679 PANTHER PTHR30509 9 260 2.7E-154 T 26-04-2016 PAM18_RS19430 97a2b196fcccd94afe15d37d34fda698 679 Pfam PF04632 Fusaric acid resistance protein family 24 664 1.6E-140 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS28560 d11dafe979aab7e6eca480d3783e8843 304 Pfam PF03547 Membrane transport protein 155 289 4.6E-8 T 26-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PAM18_RS28560 d11dafe979aab7e6eca480d3783e8843 304 PANTHER PTHR31752 95 301 6.3E-52 T 26-04-2016 PAM18_RS28560 d11dafe979aab7e6eca480d3783e8843 304 PANTHER PTHR31752:SF13 95 301 6.3E-52 T 26-04-2016 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 PANTHER PTHR11751 14 389 8.3E-215 T 26-04-2016 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 PANTHER PTHR11751:SF401 14 389 8.3E-215 T 26-04-2016 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 SUPERFAMILY SSF53383 6 387 1.33E-96 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 Gene3D G3DSA:3.40.640.10 48 253 8.1E-54 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 Pfam PF00155 Aminotransferase class I and II 33 381 7.4E-54 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS24725 670dd6aaa958e87db33992aa344f362f 390 Gene3D G3DSA:3.90.1150.10 254 386 1.4E-33 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 SUPERFAMILY SSF53448 6 230 1.13E-38 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 SUPERFAMILY SSF53448 327 498 8.53E-10 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 SUPERFAMILY SSF53756 883 1149 3.06E-8 T 26-04-2016 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 Pfam PF00535 Glycosyl transferase family 2 8 123 3.5E-20 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 Pfam PF13641 Glycosyltransferase like family 2 563 794 1.7E-18 T 26-04-2016 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 Gene3D G3DSA:3.90.550.10 387 513 4.8E-4 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 Gene3D G3DSA:3.90.550.10 6 231 1.1E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 Gene3D G3DSA:3.90.550.10 564 813 2.4E-30 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 SUPERFAMILY SSF53448 565 782 8.13E-35 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 PANTHER PTHR22916 159 228 4.2E-31 T 26-04-2016 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 PANTHER PTHR22916 6 135 4.2E-31 T 26-04-2016 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 PANTHER PTHR22916:SF33 159 228 4.2E-31 T 26-04-2016 PAM18_RS20140 4c2e4d3c9971c0ed248cf6740e35e51d 1168 PANTHER PTHR22916:SF33 6 135 4.2E-31 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 PANTHER PTHR12526 106 401 5.9E-115 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 PANTHER PTHR12526 1 82 5.9E-115 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 SUPERFAMILY SSF53756 1 395 1.85E-49 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 Pfam PF13692 Glycosyl transferases group 1 222 359 2.5E-20 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 Pfam PF13579 Glycosyl transferase 4-like domain 16 206 6.7E-25 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 PANTHER PTHR12526:SF220 106 401 5.9E-115 T 26-04-2016 PAM18_RS14395 713adf9bfe0f6db791d6f7306519bc26 402 PANTHER PTHR12526:SF220 1 82 5.9E-115 T 26-04-2016 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 1.9E-10 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 PANTHER PTHR15184 2 438 9.8E-283 T 26-04-2016 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 20 438 2.4E-172 T 26-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 SMART SM00382 162 343 3.3E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 SUPERFAMILY SSF52540 96 365 1.95E-97 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.2E-78 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 Gene3D G3DSA:3.40.50.300 96 361 2.8E-97 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 PANTHER PTHR15184:SF48 2 438 9.8E-283 T 26-04-2016 PAM18_RS17170 f44b7aa5a71514aff0b698c2c92617b2 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 22 438 5.3E-201 T 26-04-2016 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 Pfam PF00266 Aminotransferase class-V 77 363 3.6E-16 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 SUPERFAMILY SSF53383 3 400 2.58E-92 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 Gene3D G3DSA:3.90.1150.10 257 416 2.7E-61 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 Gene3D G3DSA:3.40.640.10 27 256 1.4E-24 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 PANTHER PTHR14084 1 409 4.2E-148 T 26-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 PIRSF PIRSF038800 1 407 1.4E-141 T 26-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 TIGRFAM TIGR01814 kynureninase: kynureninase 8 399 1.6E-103 T 26-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 PAM18_RS15200 a363147152e0a0db7bab0dbb14315172 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 35.208 T 26-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PANTHER PTHR11592 4 159 2.3E-85 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.0E-19 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.0E-19 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 121 130 2.0E-19 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 SUPERFAMILY SSF52833 4 159 7.97E-57 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 Pfam PF00255 Glutathione peroxidase 4 110 1.4E-37 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PIRSF PIRSF000303 1 160 1.6E-60 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 26-04-2016 IPR029759 Glutathione peroxidase active site PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 PANTHER PTHR11592:SF40 4 159 2.3E-85 T 26-04-2016 PAM18_RS21460 331d11dac7fddef80b58f05229102e4f 160 Gene3D G3DSA:3.40.30.10 4 159 1.5E-61 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 SUPERFAMILY SSF53901 8 224 3.76E-23 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 PIRSF PIRSF000429 3 375 1.1E-25 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 Gene3D G3DSA:3.40.47.10 194 221 7.0E-16 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 Gene3D G3DSA:3.40.47.10 25 115 7.0E-16 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 PANTHER PTHR18919 4 381 1.9E-192 T 26-04-2016 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 PANTHER PTHR18919:SF108 4 381 1.9E-192 T 26-04-2016 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 Gene3D G3DSA:3.40.47.10 143 179 2.1E-17 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 Gene3D G3DSA:3.40.47.10 239 360 2.1E-17 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 Pfam PF02803 Thiolase, C-terminal domain 250 358 3.6E-7 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS20575 4ffabb726a31ee57995ccdc0f975380f 383 SUPERFAMILY SSF53901 248 369 1.54E-25 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 294 7.6E-11 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 PANTHER PTHR30158:SF7 1 396 1.3E-277 T 26-04-2016 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 PANTHER PTHR30158 1 396 1.3E-277 T 26-04-2016 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 Gene3D G3DSA:2.40.50.100 64 98 4.4E-22 T 26-04-2016 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 Gene3D G3DSA:2.40.50.100 173 205 4.4E-22 T 26-04-2016 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 375 1.1E-71 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 40 360 4.5E-12 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS15510 24556c689a7ec2f776e49f3791531548 396 SUPERFAMILY SSF111369 53 300 4.71E-72 T 26-04-2016 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 Pfam PF00072 Response regulator receiver domain 4 116 4.3E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.7E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.7E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.7E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 Gene3D G3DSA:3.40.50.2300 2 120 2.7E-35 T 26-04-2016 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 PANTHER PTHR26402 2 205 7.8E-104 T 26-04-2016 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 SUPERFAMILY SSF52172 2 132 3.98E-33 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.5E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 SMART SM00421 146 203 1.4E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 PANTHER PTHR26402:SF598 2 205 7.8E-104 T 26-04-2016 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 Gene3D G3DSA:1.10.10.10 121 209 2.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 SMART SM00448 2 115 3.4E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS03045 03da68e667137c3ac3df1e41d7ae1ce5 209 SUPERFAMILY SSF46894 137 208 3.4E-19 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Gene3D G3DSA:3.30.565.10 329 487 7.3E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423:SF382 237 624 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 4.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 4.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 4.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 4.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SUPERFAMILY SSF47226 632 737 1.28E-12 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SMART SM00304 169 225 1.4E-4 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 35 141 5.2E-15 T 26-04-2016 IPR033414 Periplasmic sensor domain UniPathway: UPA00073 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Gene3D G3DSA:1.10.287.130 250 319 6.4E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423 237 624 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423 10 23 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF00072 Response regulator receiver domain 504 617 1.8E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423:SF382 10 23 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SMART SM00387 370 486 1.1E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SMART SM00448 502 617 8.4E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SUPERFAMILY SSF52172 502 620 4.13E-31 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SMART SM00388 258 323 1.1E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF01627 Hpt domain 653 711 7.4E-8 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SUPERFAMILY SSF55874 312 484 1.27E-43 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 6.1E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423:SF382 163 200 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 SUPERFAMILY SSF47384 243 321 3.73E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Gene3D G3DSA:1.20.120.160 630 712 1.3E-11 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 484 8.4E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 PANTHER PTHR24423 163 200 8.1E-145 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Gene3D G3DSA:3.40.50.2300 498 620 2.3E-31 T 26-04-2016 PAM18_RS26065 f90e2b067fc1b127fcc1ae7e968045b5 750 Pfam PF00672 HAMP domain 149 221 8.6E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 199 362 1.9E-50 T 26-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 SUPERFAMILY SSF56176 184 361 3.03E-53 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Gene3D G3DSA:3.10.20.30 2 86 5.8E-26 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 76 5.8E-6 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 SUPERFAMILY SSF47741 97 201 1.57E-33 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Pfam PF01799 [2Fe-2S] binding domain 86 158 8.3E-30 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Gene3D G3DSA:3.30.43.10 201 249 3.1E-23 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Gene3D G3DSA:3.30.390.50 371 472 3.1E-36 T 26-04-2016 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 SMART SM01092 370 471 3.7E-33 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 370 470 2.1E-30 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 PANTHER PTHR11908 2 473 7.2E-136 T 26-04-2016 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Gene3D G3DSA:1.10.150.120 87 187 6.8E-37 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 SUPERFAMILY SSF55447 368 473 1.07E-32 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 470 2.6E-211 T 26-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 SUPERFAMILY SSF54292 3 90 1.97E-18 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 Gene3D G3DSA:3.30.465.10 250 362 1.5E-35 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS18055 af9e8d8eb769f30795ac93c7416d8492 484 PIRSF PIRSF036557 1 484 9.2E-228 T 26-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 SUPERFAMILY SSF63380 13 117 1.86E-29 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 2.0E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 2.0E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 2.0E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 164 175 2.0E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Gene3D G3DSA:2.40.30.10 20 106 1.6E-29 T 26-04-2016 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Pfam PF00175 Oxidoreductase NAD-binding domain 128 234 4.9E-14 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Gene3D G3DSA:3.40.50.80 107 245 7.5E-35 T 26-04-2016 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PANTHER PTHR19370 19 272 1.8E-142 T 26-04-2016 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 358 1.6E-12 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 SUPERFAMILY SSF54292 243 365 7.6E-29 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PANTHER PTHR19370:SF89 19 272 1.8E-142 T 26-04-2016 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00406 Cytochrome B5 reductase signature 220 228 4.4E-9 T 26-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00406 Cytochrome B5 reductase signature 127 146 4.4E-9 T 26-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00406 Cytochrome B5 reductase signature 164 175 4.4E-9 T 26-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00406 Cytochrome B5 reductase signature 104 118 4.4E-9 T 26-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 PRINTS PR00406 Cytochrome B5 reductase signature 67 74 4.4E-9 T 26-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Gene3D G3DSA:3.10.20.30 246 365 1.0E-31 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 SUPERFAMILY SSF52343 108 250 3.67E-37 T 26-04-2016 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS28275 ffd46d8adb8436943bef0aacfa3b9deb 366 Pfam PF00970 Oxidoreductase FAD-binding domain 25 116 3.6E-17 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PIRSF PIRSF001174 21 799 2.6E-273 T 26-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 SUPERFAMILY SSF52540 337 614 1.01E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 379 517 2.1E-22 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Gene3D G3DSA:3.30.230.10 620 797 2.2E-64 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Gene3D G3DSA:1.10.8.60 519 611 4.7E-30 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PANTHER PTHR10046 5 799 0.0 T 26-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 SUPERFAMILY SSF88697 32 227 6.46E-19 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Hamap MF_01973 Lon protease [lon]. 32 798 59.922 T 26-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 702 710 - T 26-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Gene3D G3DSA:3.40.50.300 337 516 1.2E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 SMART SM00464 31 228 8.5E-23 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 1.6E-47 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 620 636 1.6E-47 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 748 1.6E-47 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 752 770 1.6E-47 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 383 402 1.6E-47 T 26-04-2016 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 SUPERFAMILY SSF54211 620 797 9.48E-47 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 SMART SM00382 375 520 3.1E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 597 797 3.6E-79 T 26-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 TIGRFAM TIGR00763 lon: endopeptidase La 34 797 2.0E-277 T 26-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PAM18_RS21745 5beab33353d69943cfbd27caa639330c 799 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 32 227 4.1E-25 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS00275 2fe178357537d47d4ee9f56158741146 142 Gene3D G3DSA:2.60.120.10 50 124 2.7E-8 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS00275 2fe178357537d47d4ee9f56158741146 142 SUPERFAMILY SSF51182 12 123 1.31E-10 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 SUPERFAMILY SSF55486 22 220 1.27E-20 T 26-04-2016 PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 Gene3D G3DSA:3.40.390.10 21 197 6.2E-8 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 Pfam PF02018 Carbohydrate binding domain 458 583 2.7E-8 T 26-04-2016 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 Gene3D G3DSA:2.60.120.260 303 445 8.1E-10 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 Gene3D G3DSA:2.60.120.260 458 597 4.2E-19 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 PANTHER PTHR31490 341 596 1.0E-45 T 26-04-2016 PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 SUPERFAMILY SSF49785 455 598 4.82E-24 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 46 175 4.0E-25 T 26-04-2016 PAM18_RS11195 13b52200f4b561eda67173dbf06bc588 599 SUPERFAMILY SSF49785 306 440 2.83E-14 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 SUPERFAMILY SSF52540 13 374 1.95E-103 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 PIRSF PIRSF000980 13 1171 0.0 T 26-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 PANTHER PTHR30591 7 1171 0.0 T 26-04-2016 PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 SUPERFAMILY SSF52540 389 826 3.82E-93 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 SUPERFAMILY SSF52980 841 1163 3.81E-63 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 13 1165 13.531 T 26-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 Gene3D G3DSA:1.10.10.160 108 208 4.9E-32 T 26-04-2016 IPR013986 DExx box DNA helicase domain PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 Gene3D G3DSA:3.40.50.300 389 477 1.2E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 Gene3D G3DSA:3.40.50.300 680 777 1.2E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 14 829 5.0E-286 T 26-04-2016 PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 14 1128 0.0 T 26-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 PAM18_RS22360 8f7281db66e5ee89eaf9840d792be020 1171 PANTHER PTHR30591:SF1 7 1171 0.0 T 26-04-2016 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PANTHER PTHR40942 1 141 2.0E-66 T 26-04-2016 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 Gene3D G3DSA:1.10.760.10 62 140 1.3E-30 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PANTHER PTHR40942:SF1 1 141 2.0E-66 T 26-04-2016 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 139 2.6E-13 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 SUPERFAMILY SSF46626 61 141 1.32E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 84 94 1.7E-19 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 129 140 1.7E-19 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 114 126 1.7E-19 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27695 cd1e4ac5765d647a7b351b4f3a9a1adc 142 PRINTS PR00607 Class IE cytochrome C signature 73 84 1.7E-19 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS06640 c81cbaed0ca34733f9baac241f94407b 94 Pfam PF04977 Septum formation initiator 17 92 3.2E-23 T 26-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PAM18_RS06640 c81cbaed0ca34733f9baac241f94407b 94 PANTHER PTHR37485:SF1 7 94 4.0E-46 T 26-04-2016 PAM18_RS06640 c81cbaed0ca34733f9baac241f94407b 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 94 32.351 T 26-04-2016 IPR023081 Cell division protein FtsB PAM18_RS06640 c81cbaed0ca34733f9baac241f94407b 94 PANTHER PTHR37485 7 94 4.0E-46 T 26-04-2016 PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 SUPERFAMILY SSF51161 40 198 4.57E-35 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 Gene3D G3DSA:2.160.10.10 35 199 2.6E-39 T 26-04-2016 PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 PANTHER PTHR23416:SF69 55 231 5.8E-42 T 26-04-2016 PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 157 1.3E-7 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS01650 42fd9ac1e7e8650ca2f4c5cab2f38efc 241 PANTHER PTHR23416 55 231 5.8E-42 T 26-04-2016 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF160246 16 160 9.15E-12 T 26-04-2016 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 PANTHER PTHR30258:SF13 1 594 0.0 T 26-04-2016 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.30.450.90 196 313 6.2E-46 T 26-04-2016 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF00437 Type II/IV secretion system protein 219 480 9.7E-74 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 69 167 1.8E-15 T 26-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 408 422 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.40.50.300 319 591 2.8E-93 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 PANTHER PTHR30258 1 594 0.0 T 26-04-2016 PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 SMART SM00382 341 464 1.3E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27240 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF52540 199 588 4.86E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.2090.10 699 782 1.2E-17 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:1.20.1640.10 824 1007 2.7E-47 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-75 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82866 808 1003 4.19E-44 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82866 290 490 3.4E-53 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.70.1440 651 697 3.5E-9 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.70.1440 794 823 3.5E-9 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 650 698 1.88E-15 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.70.1430 42 141 2.7E-23 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.70.1430 555 650 4.8E-17 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:3.30.2090.10 183 268 2.3E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 553 650 4.45E-23 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82714 183 264 3.53E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PANTHER PTHR32063:SF14 1 1004 0.0 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1002 7.5E-274 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 42 132 4.45E-20 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82714 699 781 1.01E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 785 832 1.88E-15 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 267 323 6.28E-24 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 SUPERFAMILY SSF82693 137 181 6.28E-24 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 Gene3D G3DSA:1.10.3850.10 271 491 1.8E-65 T 26-04-2016 PAM18_RS22820 8467c1b47e5e3cdb9caa1f33539caa4b 1018 PANTHER PTHR32063 1 1004 0.0 T 26-04-2016 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 3.5E-201 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PANTHER PTHR10283 1 427 6.9E-155 T 26-04-2016 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PANTHER PTHR10283:SF21 1 427 6.9E-155 T 26-04-2016 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 Pfam PF02040 Arsenical pump membrane protein 4 422 2.5E-149 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS14195 a7d86c32af377c58625cd1a7cd128fa2 427 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.7E-109 T 26-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.0E-39 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PANTHER PTHR11404 1 193 1.3E-114 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PIRSF PIRSF000349 1 193 3.5E-87 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.0E-35 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 Gene3D G3DSA:1.10.287.990 20 82 5.8E-26 T 26-04-2016 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PANTHER PTHR11404:SF8 1 193 1.3E-114 T 26-04-2016 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 26-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.6E-23 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.6E-23 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.6E-23 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.6E-23 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.6E-23 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF46609 1 84 1.83E-36 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS22775 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF54719 81 192 9.17E-46 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Gene3D G3DSA:3.40.50.300 565 791 6.9E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SMART SM00382 609 770 2.8E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SMART SM00382 203 348 2.6E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 339 1.1E-9 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 863 0.0 T 26-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Gene3D G3DSA:1.10.8.60 349 432 1.9E-27 T 26-04-2016 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 785 854 5.7E-10 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Pfam PF07724 AAA domain (Cdc48 subfamily) 609 774 7.9E-42 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SUPERFAMILY SSF52540 558 855 6.1E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 299 311 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 643 661 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SMART SM01086 780 872 1.8E-7 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Gene3D G3DSA:3.40.50.300 167 347 5.8E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SUPERFAMILY SSF52540 165 542 1.43E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 SUPERFAMILY SSF81923 18 126 1.04E-10 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 2.0E-33 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 2.0E-33 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 2.0E-33 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 2.0E-33 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PANTHER PTHR11638 1 871 0.0 T 26-04-2016 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Gene3D G3DSA:1.10.1780.10 15 139 2.1E-13 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 PANTHER PTHR11638:SF11 1 871 0.0 T 26-04-2016 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 27 73 3.0E-4 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS17350 397f24ee851cf8042d363a6de0fef763 875 Gene3D G3DSA:1.10.8.60 792 861 1.6E-10 T 26-04-2016 PAM18_RS00060 d27c726848d1e6ded3db86db924a7fc7 88 Pfam PF07238 PilZ domain 4 85 1.2E-9 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS00060 d27c726848d1e6ded3db86db924a7fc7 88 SUPERFAMILY SSF141371 1 86 6.67E-9 T 26-04-2016 PAM18_RS00060 d27c726848d1e6ded3db86db924a7fc7 88 Gene3D G3DSA:2.40.10.220 1 84 2.8E-5 T 26-04-2016 PAM18_RS09025 6cbf417298afd318b550172ee78fa0ad 381 PANTHER PTHR30188:SF3 38 381 1.9E-183 T 26-04-2016 PAM18_RS09025 6cbf417298afd318b550172ee78fa0ad 381 Pfam PF02405 Permease MlaE 165 374 6.8E-67 T 26-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PAM18_RS09025 6cbf417298afd318b550172ee78fa0ad 381 PANTHER PTHR30188 38 381 1.9E-183 T 26-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PAM18_RS09025 6cbf417298afd318b550172ee78fa0ad 381 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 140 376 1.7E-67 T 26-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 149 2.1E-70 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF52283 10 198 8.5E-108 T 26-04-2016 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF52283 382 469 8.5E-108 T 26-04-2016 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 199 381 1.5E-56 T 26-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 461 43.835 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 SMART SM00996 12 468 1.0E-276 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 26-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 PIRSF PIRSF001109 2 469 2.0E-184 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 PANTHER PTHR23420 4 469 0.0 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 SMART SM00997 199 381 4.8E-82 T 26-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 461 2.8E-153 T 26-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.720 201 380 5.1E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 221 237 - T 26-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.1480 382 469 6.5E-131 T 26-04-2016 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.1480 12 200 6.5E-131 T 26-04-2016 PAM18_RS02185 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF51735 199 381 1.47E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04350 bba92398a94548f0417cd681e3d3f029 189 PANTHER PTHR33420 1 189 6.4E-47 T 26-04-2016 PAM18_RS04350 bba92398a94548f0417cd681e3d3f029 189 Pfam PF16970 Type-1 fimbrial protein, A 64 189 4.1E-8 T 26-04-2016 PAM18_RS04350 bba92398a94548f0417cd681e3d3f029 189 Gene3D G3DSA:2.60.40.1090 32 189 6.3E-23 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS04350 bba92398a94548f0417cd681e3d3f029 189 SUPERFAMILY SSF49401 33 189 4.97E-19 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS04350 bba92398a94548f0417cd681e3d3f029 189 PANTHER PTHR33420:SF1 1 189 6.4E-47 T 26-04-2016 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 1.0E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 Pfam PF08521 Two-component sensor kinase N-terminal 16 147 3.5E-9 T 26-04-2016 IPR013727 Two-component sensor kinase, N-terminal PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 SMART SM00387 334 440 2.7E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.8E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 6.8E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.8E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 PANTHER PTHR24423 166 440 1.1E-48 T 26-04-2016 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 SUPERFAMILY SSF55874 333 437 1.14E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 PANTHER PTHR24423:SF474 166 440 1.1E-48 T 26-04-2016 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 Gene3D G3DSA:1.10.287.130 217 285 3.1E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 SUPERFAMILY SSF47384 208 287 7.26E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 7.6E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 SMART SM00388 225 289 3.8E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS13180 b69a57c912d5841e0f08d71ab4afe7fc 440 Gene3D G3DSA:3.30.565.10 325 439 1.1E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 Pfam PF01804 Penicillin amidase 42 782 1.7E-201 T 26-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 Gene3D G3DSA:1.10.439.10 30 197 1.3E-53 T 26-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 Gene3D G3DSA:3.60.20.10 403 637 6.8E-89 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 Gene3D G3DSA:3.60.20.10 248 323 6.8E-89 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 PANTHER PTHR34218:SF1 1 795 0.0 T 26-04-2016 PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 SUPERFAMILY SSF56235 39 794 9.77E-214 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 PANTHER PTHR34218 1 795 0.0 T 26-04-2016 PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 PIRSF PIRSF001227 1 794 3.2E-170 T 26-04-2016 IPR014395 Penicillin acylase GO:0016811 PAM18_RS01525 6ee7de37e0973bf8209208132dd37d16 795 Gene3D G3DSA:2.30.120.10 324 392 1.7E-23 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 Gene3D G3DSA:2.70.50.60 251 397 3.4E-41 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 Pfam PF00005 ABC transporter 41 173 2.6E-20 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 Gene3D G3DSA:3.40.50.300 38 246 9.3E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220:SF117 38 237 1.1E-103 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220:SF117 5 15 1.1E-103 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220:SF117 317 330 1.1E-103 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 SUPERFAMILY SSF52540 38 237 9.19E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 Pfam PF14524 Wzt C-terminal domain 260 398 6.8E-34 T 26-04-2016 IPR029439 Wzt, C-terminal PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 SMART SM00382 50 239 1.6E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220 38 237 1.1E-103 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220 5 15 1.1E-103 T 26-04-2016 PAM18_RS28480 842c4ccd30636d82797f0576e8611b08 421 PANTHER PTHR24220 317 330 1.1E-103 T 26-04-2016 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 342 440 7.46E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 255 355 6.56E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PANTHER PTHR10724 1 514 4.5E-271 T 26-04-2016 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.5E-220 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.3E-88 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 275 347 1.8E-26 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 362 434 9.7E-21 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 190 260 1.4E-28 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 103 171 1.3E-8 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 449 520 2.6E-21 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 19 87 2.0E-5 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 PANTHER PTHR10724:SF6 1 514 4.5E-271 T 26-04-2016 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 104 185 8.95E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 19 85 3.6E-7 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 189 260 8.9E-22 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 103 171 1.7E-11 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-19 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 448 520 1.0E-15 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 275 347 2.0E-21 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 1 112 1.33E-20 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 358 439 2.0E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 280 357 5.9E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 192 279 5.5E-31 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 21 100 8.0E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 429 536 8.95E-24 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 189 277 1.94E-27 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 101 172 1.4E-14 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09275 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 444 520 2.0E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 SUPERFAMILY SSF46785 3 73 5.74E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.9E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.9E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PANTHER PTHR11751:SF277 88 110 1.5E-44 T 26-04-2016 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PANTHER PTHR11751:SF277 8 72 1.5E-44 T 26-04-2016 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 2.6E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 SMART SM00895 94 225 5.0E-26 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PANTHER PTHR11751 88 110 1.5E-44 T 26-04-2016 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 PANTHER PTHR11751 8 72 1.5E-44 T 26-04-2016 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 Gene3D G3DSA:1.20.120.530 89 236 5.2E-32 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 SMART SM00345 10 69 5.8E-13 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 SUPERFAMILY SSF48008 91 232 1.83E-26 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 Pfam PF07729 FCD domain 94 224 4.5E-26 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS27975 23b1e8a15e9752aba69f812115076c5c 251 Gene3D G3DSA:1.10.10.10 2 73 4.9E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 SUPERFAMILY SSF63380 151 253 1.02E-30 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Pfam PF00970 Oxidoreductase FAD-binding domain 159 253 6.2E-13 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 SUPERFAMILY SSF46458 1 142 5.65E-38 T 26-04-2016 IPR009050 Globin-like PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Gene3D G3DSA:1.10.490.10 2 143 6.3E-50 T 26-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PANTHER PTHR22924:SF49 1 391 2.6E-128 T 26-04-2016 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Hamap MF_01252 Flavohemoprotein [hmp]. 1 391 53.627 T 26-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PANTHER PTHR22924 1 391 2.6E-128 T 26-04-2016 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 SUPERFAMILY SSF52343 255 388 5.63E-33 T 26-04-2016 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Gene3D G3DSA:2.40.30.10 152 255 1.3E-35 T 26-04-2016 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Pfam PF00042 Globin 6 103 8.8E-9 T 26-04-2016 IPR000971 Globin GO:0019825|GO:0020037 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 186 198 6.8E-9 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 248 257 6.8E-9 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.8E-9 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 353 361 6.8E-9 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Pfam PF00175 Oxidoreductase NAD-binding domain 264 367 7.7E-10 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS11865 028641433929f1f3dda7d2687f7f16ed 393 Gene3D G3DSA:3.40.50.80 256 389 7.1E-31 T 26-04-2016 PAM18_RS13790 3f50b398318e6bf157f5da8fccb76cdf 366 PANTHER PTHR37951 6 366 1.9E-146 T 26-04-2016 PAM18_RS13790 3f50b398318e6bf157f5da8fccb76cdf 366 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 363 7.7E-125 T 26-04-2016 IPR017740 Type VI secretion system-associated, ImpA PAM18_RS13790 3f50b398318e6bf157f5da8fccb76cdf 366 PANTHER PTHR37951:SF1 6 366 1.9E-146 T 26-04-2016 PAM18_RS13790 3f50b398318e6bf157f5da8fccb76cdf 366 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 138 4.3E-37 T 26-04-2016 IPR010657 ImpA, N-terminal PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 PANTHER PTHR32089 1 662 2.1E-281 T 26-04-2016 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 Gene3D G3DSA:3.60.40.10 541 660 7.3E-4 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 SUPERFAMILY SSF158472 337 386 1.01E-9 T 26-04-2016 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 Gene3D G3DSA:3.30.450.20 175 302 4.3E-5 T 26-04-2016 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 SMART SM00304 337 389 4.0E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 Pfam PF00672 HAMP domain 319 385 3.9E-16 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 466 663 1.1E-24 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 SMART SM00331 453 662 1.4E-9 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 SUPERFAMILY SSF81606 448 659 4.71E-6 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00870 fc54e92eb7aa56bd545de6609cd0dd7d 663 PANTHER PTHR32089:SF27 1 662 2.1E-281 T 26-04-2016 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 83 91 7.6E-10 T 26-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 60 74 7.6E-10 T 26-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 42 52 7.6E-10 T 26-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 SUPERFAMILY SSF54292 4 106 1.39E-34 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.2E-58 T 26-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 5.3E-17 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 PANTHER PTHR23426 7 112 7.1E-44 T 26-04-2016 PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 Gene3D G3DSA:3.10.20.30 5 106 1.2E-35 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS05730 0d83393a0151cdca5df4206f9281d85d 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 26-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 SUPERFAMILY SSF89796 6 393 1.15E-135 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 Gene3D G3DSA:3.30.1540.10 225 307 8.1E-29 T 26-04-2016 PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 Pfam PF02515 CoA-transferase family III 8 370 5.3E-123 T 26-04-2016 IPR003673 CoA-transferase family III GO:0003824 PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 Gene3D G3DSA:3.40.50.10540 4 219 4.8E-110 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 Gene3D G3DSA:3.40.50.10540 308 393 4.8E-110 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 PANTHER PTHR24023:SF593 80 380 6.9E-25 T 26-04-2016 PAM18_RS07170 5e3132a966688e3630b85b687759315f 395 PANTHER PTHR24023 80 380 6.9E-25 T 26-04-2016 PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 SUPERFAMILY SSF53850 25 260 2.17E-86 T 26-04-2016 PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 PANTHER PTHR30429 1 260 3.0E-148 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 Gene3D G3DSA:3.40.190.10 23 151 2.7E-57 T 26-04-2016 PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 Pfam PF03180 NLPA lipoprotein 25 260 9.6E-103 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 PIRSF PIRSF002854 1 260 5.0E-107 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 PANTHER PTHR30429:SF0 1 260 3.0E-148 T 26-04-2016 PAM18_RS28755 8fa4cec39ef9a9bc9a5ca142c0d7c6f3 260 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 45 259 5.1E-70 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 315 4.0E-65 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 SUPERFAMILY SSF161111 22 242 1.23E-50 T 26-04-2016 PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 PANTHER PTHR11562 1 315 9.5E-192 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 PANTHER PTHR11562:SF40 1 315 9.5E-192 T 26-04-2016 PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 Pfam PF01545 Cation efflux family 30 241 2.0E-41 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS18460 27bead72b8114457871ed4732d8cec11 321 Gene3D G3DSA:1.20.1510.10 24 241 4.0E-49 T 26-04-2016 IPR027469 Cation efflux protein transmembrane domain PAM18_RS25185 798e6e4f687a3eef33912d7c9b772b73 208 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 5 203 1.2E-60 T 26-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 PAM18_RS25185 798e6e4f687a3eef33912d7c9b772b73 208 Pfam PF01292 Prokaryotic cytochrome b561 7 175 5.4E-21 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS25185 798e6e4f687a3eef33912d7c9b772b73 208 Gene3D G3DSA:1.20.950.20 2 206 3.2E-64 T 26-04-2016 PAM18_RS25185 798e6e4f687a3eef33912d7c9b772b73 208 SUPERFAMILY SSF81342 3 206 1.41E-51 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS25185 798e6e4f687a3eef33912d7c9b772b73 208 PANTHER PTHR30074 3 207 7.8E-83 T 26-04-2016 PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 SMART SM01007 33 211 2.8E-43 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 SUPERFAMILY SSF53639 26 243 2.16E-66 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 PANTHER PTHR10672:SF17 22 247 1.1E-91 T 26-04-2016 PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 PANTHER PTHR10672 22 247 1.1E-91 T 26-04-2016 PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 211 4.9E-38 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS01110 edaa640062b6f1aa3f0372185af2d4b6 260 Gene3D G3DSA:3.40.225.10 30 238 5.1E-54 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 PANTHER PTHR12383:SF27 3 271 1.2E-94 T 26-04-2016 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 Gene3D G3DSA:2.10.109.10 216 268 2.1E-53 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 Gene3D G3DSA:2.10.109.10 75 153 2.1E-53 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 266 2.0E-49 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 Pfam PF00717 Peptidase S24-like 85 168 3.8E-22 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 26-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 26-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 5.4E-26 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 5.4E-26 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 5.4E-26 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 26-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 SUPERFAMILY SSF51306 77 271 1.44E-64 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS21800 447f21352030e18c6febd8227e4c89cf 284 PANTHER PTHR12383 3 271 1.2E-94 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 5.3E-22 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 PANTHER PTHR30450:SF4 1 232 4.9E-176 T 26-04-2016 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 SUPERFAMILY SSF161098 13 215 2.09E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 Gene3D G3DSA:1.10.3720.10 10 223 4.4E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 PANTHER PTHR30450 1 232 4.9E-176 T 26-04-2016 PAM18_RS21195 06c06f9a1d7efe3d662505c32f739074 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 223 1.0E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 287 5.1E-85 T 26-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 Pfam PF02254 TrkA-N domain 409 520 7.9E-25 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 PANTHER PTHR16254:SF6 1 563 4.1E-252 T 26-04-2016 PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 SUPERFAMILY SSF51735 407 543 2.8E-30 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 Gene3D G3DSA:3.40.50.720 403 537 4.7E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 PANTHER PTHR16254 1 563 4.1E-252 T 26-04-2016 PAM18_RS19555 8022c0d8a5abebe9077d713fd2cfa0fc 613 Pfam PF00999 Sodium/hydrogen exchanger family 13 377 3.8E-70 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 Gene3D G3DSA:3.40.50.1100 69 325 1.2E-83 T 26-04-2016 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 502 2.3E-241 T 26-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 PANTHER PTHR10314:SF30 5 358 2.2E-196 T 26-04-2016 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 9.3E-81 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 502 2.6E-25 T 26-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 8.9E-24 T 26-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 Gene3D G3DSA:3.40.1020.10 329 502 6.8E-56 T 26-04-2016 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 SUPERFAMILY SSF53686 7 355 3.67E-103 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 SUPERFAMILY SSF55021 410 502 2.52E-27 T 26-04-2016 PAM18_RS18315 6586815c717070705f1c87a1f60acfb9 504 PANTHER PTHR10314 5 358 2.2E-196 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 5.3E-30 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.3E-30 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.3E-30 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 5.3E-30 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-30 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 SUPERFAMILY SSF55424 335 447 3.95E-36 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 Gene3D G3DSA:3.50.50.60 4 135 1.6E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PANTHER PTHR22912:SF106 1 450 2.1E-218 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PIRSF PIRSF000350 1 444 1.2E-86 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PANTHER PTHR22912 1 450 2.1E-218 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 Gene3D G3DSA:3.50.50.60 136 323 3.1E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 1.8E-35 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 Gene3D G3DSA:3.30.390.30 324 447 2.3E-43 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 3.1E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 SUPERFAMILY SSF51905 1 358 8.37E-60 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.8E-68 T 26-04-2016 PAM18_RS15480 5af6598b5853953722edf32a0d914a5c 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.8E-68 T 26-04-2016 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 SUPERFAMILY SSF88946 10 88 3.61E-15 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 169 1.1E-27 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 Gene3D G3DSA:1.10.10.10 106 171 1.6E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 PANTHER PTHR30173 13 172 3.0E-83 T 26-04-2016 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 Pfam PF08281 Sigma-70, region 4 115 165 5.1E-16 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 PANTHER PTHR30173:SF30 13 172 3.0E-83 T 26-04-2016 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 SUPERFAMILY SSF88659 96 170 7.63E-16 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 Gene3D G3DSA:1.10.1740.10 10 78 9.0E-15 T 26-04-2016 PAM18_RS18445 e5bf7aef86fedaddb764f166386a64ab 175 Pfam PF04542 Sigma-70 region 2 13 78 5.8E-15 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069 91 371 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 7.9E-22 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069:SF1 91 371 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 Gene3D G3DSA:3.40.47.10 3 204 2.0E-47 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069 1 25 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069 50 70 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 Gene3D G3DSA:3.40.47.10 205 371 6.0E-27 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069:SF1 1 25 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 PANTHER PTHR34069:SF1 50 70 1.9E-232 T 26-04-2016 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 227 1.5E-17 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08625 3da750b2fd5b7825be15616bc17662d6 373 SUPERFAMILY SSF53901 4 372 1.71E-52 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS22120 299e40c5f25a2882ab7ce50df303a596 300 Pfam PF00535 Glycosyl transferase family 2 20 179 1.4E-33 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS22120 299e40c5f25a2882ab7ce50df303a596 300 SUPERFAMILY SSF53448 17 229 1.41E-57 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS22120 299e40c5f25a2882ab7ce50df303a596 300 PANTHER PTHR22916 1 298 8.7E-103 T 26-04-2016 PAM18_RS22120 299e40c5f25a2882ab7ce50df303a596 300 Gene3D G3DSA:3.90.550.10 17 238 2.5E-56 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS22120 299e40c5f25a2882ab7ce50df303a596 300 PANTHER PTHR22916:SF17 1 298 8.7E-103 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 406 65.22 T 26-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 SUPERFAMILY SSF63380 105 270 3.08E-36 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 PANTHER PTHR19370 61 176 1.4E-142 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 PANTHER PTHR19370 205 406 1.4E-142 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Gene3D G3DSA:3.40.50.80 275 391 6.0E-42 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 406 2.9E-230 T 26-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 SUPERFAMILY SSF54292 39 124 2.14E-23 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Gene3D G3DSA:3.10.20.30 39 123 6.7E-22 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Pfam PF00970 Oxidoreductase FAD-binding domain 204 265 5.1E-10 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 SUPERFAMILY SSF52343 256 401 3.14E-37 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 3.5E-11 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 PANTHER PTHR19370:SF32 61 176 1.4E-142 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 PANTHER PTHR19370:SF32 205 406 1.4E-142 T 26-04-2016 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 PIRSF PIRSF000044 2 406 4.2E-232 T 26-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Pfam PF00175 Oxidoreductase NAD-binding domain 276 385 7.5E-18 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS10100 00fe444e318a3ca0dc5e9b0d7e738d0a 406 Gene3D G3DSA:2.40.30.10 124 263 4.0E-58 T 26-04-2016 PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 SUPERFAMILY SSF56112 18 340 3.46E-60 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 Pfam PF01636 Phosphotransferase enzyme family 38 273 7.1E-50 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 Gene3D G3DSA:3.90.1200.10 134 343 1.5E-36 T 26-04-2016 PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 PANTHER PTHR10909:SF338 62 155 5.1E-16 T 26-04-2016 PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 PANTHER PTHR10909:SF338 179 207 5.1E-16 T 26-04-2016 PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 PANTHER PTHR10909 62 155 5.1E-16 T 26-04-2016 PAM18_RS16470 239cf1fe377c66a2cdb229dd9a16da61 356 PANTHER PTHR10909 179 207 5.1E-16 T 26-04-2016 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:3.40.190.10 177 261 2.2E-21 T 26-04-2016 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 Pfam PF03466 LysR substrate binding domain 88 298 3.4E-46 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:1.10.10.10 2 83 7.6E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 PANTHER PTHR30126 2 301 1.9E-138 T 26-04-2016 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF53850 89 301 3.98E-45 T 26-04-2016 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 PANTHER PTHR30126:SF15 2 301 1.9E-138 T 26-04-2016 PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF46785 3 110 9.08E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13315 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:3.40.190.10 92 176 3.5E-24 T 26-04-2016 PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 SMART SM00052 261 505 3.8E-89 T 26-04-2016 IPR001633 EAL domain PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 Pfam PF12792 CSS motif domain associated with EAL 45 235 2.1E-33 T 26-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 PANTHER PTHR33121:SF16 213 521 1.0E-115 T 26-04-2016 PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 SUPERFAMILY SSF141868 267 513 7.85E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 Pfam PF00563 EAL domain 269 500 9.1E-66 T 26-04-2016 IPR001633 EAL domain PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 PANTHER PTHR33121 213 521 1.0E-115 T 26-04-2016 PAM18_RS11010 6480f8a809dd9d6538745200500ab22c 525 Gene3D G3DSA:3.20.20.450 265 511 4.3E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 SUPERFAMILY SSF53335 135 431 2.89E-71 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 26-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Gene3D G3DSA:3.40.50.150 229 430 1.7E-51 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 1.6E-28 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.6E-28 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 1.6E-28 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 1.6E-28 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.6E-28 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 239 428 6.9E-63 T 26-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 430 7.1E-129 T 26-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Gene3D G3DSA:1.10.940.10 1 144 4.8E-41 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Pfam PF01029 NusB family 1 123 4.2E-21 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 SUPERFAMILY SSF48013 1 146 4.45E-35 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Gene3D G3DSA:1.10.287.730 145 169 8.0E-10 T 26-04-2016 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 Gene3D G3DSA:3.30.70.1170 170 227 2.5E-25 T 26-04-2016 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PANTHER PTHR22807 35 432 6.5E-123 T 26-04-2016 PAM18_RS00085 cf450b7dd3d97e4b822eb06fef22df27 434 PANTHER PTHR22807:SF30 35 432 6.5E-123 T 26-04-2016 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Gene3D G3DSA:3.20.20.70 808 1185 2.3E-162 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Pfam PF04898 Glutamate synthase central domain 458 736 1.9E-100 T 26-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Pfam PF01493 GXGXG motif 1236 1422 3.6E-77 T 26-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Gene3D G3DSA:2.160.20.60 1211 1466 2.5E-92 T 26-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 SUPERFAMILY SSF51395 445 1187 4.58E-250 T 26-04-2016 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 PANTHER PTHR11938 4 1478 0.0 T 26-04-2016 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 SUPERFAMILY SSF56235 15 432 5.58E-143 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Pfam PF01645 Conserved region in glutamate synthase 792 1155 1.1E-148 T 26-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Pfam PF00310 Glutamine amidotransferases class-II 15 428 3.2E-173 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 SUPERFAMILY SSF69336 1212 1466 6.54E-87 T 26-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Gene3D G3DSA:3.60.20.10 15 437 4.7E-164 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 PANTHER PTHR11938:SF1 4 1478 0.0 T 26-04-2016 PAM18_RS26345 1dc6e3750dff8b4b9c25c44d5d1f1c55 1481 Gene3D G3DSA:3.20.20.70 440 776 4.7E-94 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1237 0.0 T 26-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070:SF23 550 812 0.0 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070:SF23 123 220 0.0 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070:SF23 838 1233 0.0 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070:SF23 316 524 0.0 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070:SF23 1 91 0.0 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 461 8.7E-58 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.40.50.300 477 618 1.1E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.40.50.300 764 915 1.1E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.90.320.10 932 1241 1.8E-86 T 26-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1011 1214 1.4E-6 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 7 1238 14.899 T 26-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:1.10.486.10 621 763 1.3E-48 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52540 123 207 1.81E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52540 555 802 1.81E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52540 839 863 1.81E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52540 5 82 1.81E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52540 343 519 1.81E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Pfam PF13361 UvrD-like helicase C-terminal domain 723 859 1.9E-12 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:1.10.3170.10 160 367 3.1E-47 T 26-04-2016 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070 550 812 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070 123 220 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070 838 1233 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070 316 524 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 PANTHER PTHR11070 1 91 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.40.50.300 3 84 1.2E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.40.50.300 125 155 1.2E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 Gene3D G3DSA:3.40.50.300 369 476 1.2E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22355 d4bddb8109ce823a2345f03e8a97a5ce 1245 SUPERFAMILY SSF52980 942 1239 1.34E-70 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 26-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 2.4E-25 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.99 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 SUPERFAMILY SSF57829 1 49 2.93E-18 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Pfam PF00471 Ribosomal protein L33 4 49 3.5E-17 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27770 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 PANTHER PTHR15238 1 51 4.1E-24 T 26-04-2016 PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 Pfam PF00005 ABC transporter 30 169 3.9E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 SUPERFAMILY SSF52540 10 200 4.12E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 PANTHER PTHR24220 15 203 5.7E-96 T 26-04-2016 PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 PANTHER PTHR24220:SF508 15 203 5.7E-96 T 26-04-2016 PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 SMART SM00382 38 231 2.1E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 Gene3D G3DSA:3.40.50.300 8 204 2.5E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS18715 94152e5c889c102f3ffc9ce71ded6a3a 233 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 14 214 8.1E-84 T 26-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 PANTHER PTHR30537 1 298 1.6E-197 T 26-04-2016 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 PANTHER PTHR30537:SF7 1 298 1.6E-197 T 26-04-2016 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 Gene3D G3DSA:1.10.10.10 4 81 2.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 SUPERFAMILY SSF46785 4 83 1.54E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 Gene3D G3DSA:3.40.190.10 92 175 3.0E-22 T 26-04-2016 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 Pfam PF03466 LysR substrate binding domain 89 293 3.4E-44 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.7E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 SUPERFAMILY SSF53850 89 297 6.15E-47 T 26-04-2016 PAM18_RS12910 246b5aa3f555ae29d2678778bcf3db40 303 Gene3D G3DSA:3.40.190.10 176 262 2.3E-18 T 26-04-2016 PAM18_RS13940 b4162c423ec42bdd80dc26db4756a6b1 355 SUPERFAMILY SSF56645 7 210 2.23E-30 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13940 b4162c423ec42bdd80dc26db4756a6b1 355 Gene3D G3DSA:2.40.110.10 118 209 1.9E-8 T 26-04-2016 PAM18_RS13940 b4162c423ec42bdd80dc26db4756a6b1 355 Gene3D G3DSA:1.10.540.10 8 103 2.1E-12 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13940 b4162c423ec42bdd80dc26db4756a6b1 355 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 102 5.5E-7 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 Gene3D G3DSA:1.20.140.10 266 460 1.5E-31 T 26-04-2016 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 Gene3D G3DSA:2.40.110.10 145 265 1.4E-47 T 26-04-2016 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 281 480 1.6E-54 T 26-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 PIRSF PIRSF000331 7 492 3.7E-182 T 26-04-2016 IPR004925 HpaB/PvcC/4-BUDH PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 SUPERFAMILY SSF47203 265 484 2.09E-50 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 PANTHER PTHR36117:SF1 3 500 0.0 T 26-04-2016 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 PIRSF PIRSF500125 1 500 1.8E-234 T 26-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 SUPERFAMILY SSF56645 9 274 1.65E-73 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 PANTHER PTHR36117 3 500 0.0 T 26-04-2016 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 Gene3D G3DSA:1.10.3140.10 9 142 2.0E-42 T 26-04-2016 PAM18_RS14305 d3292e18f6290cec7fa56ddb6722c5f3 500 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 11 273 2.9E-88 T 26-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 258 411 3.4E-53 T 26-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 SUPERFAMILY SSF53335 9 110 1.8E-6 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 SUPERFAMILY SSF53335 138 204 1.8E-6 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 PANTHER PTHR13847 216 407 1.8E-68 T 26-04-2016 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Gene3D G3DSA:3.50.50.60 384 415 3.3E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Gene3D G3DSA:3.50.50.60 258 327 3.3E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 654 19.792 T 26-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 PANTHER PTHR13847:SF206 216 407 1.8E-68 T 26-04-2016 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 234 6.6E-45 T 26-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Gene3D G3DSA:3.40.50.150 8 237 8.3E-91 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 Pfam PF01266 FAD dependent oxidoreductase 259 408 3.9E-26 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS07760 7b3fb89a4bbed1e2fc7c19f2e304be58 654 SUPERFAMILY SSF51905 259 412 1.75E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF09278 MerR, DNA binding 44 108 2.4E-21 T 26-04-2016 IPR015358 Transcription regulator MerR, DNA binding PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 SMART SM00422 1 70 1.0E-32 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF00376 MerR family regulatory protein 2 39 6.3E-16 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.7E-53 T 26-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 PANTHER PTHR30204 1 132 2.3E-75 T 26-04-2016 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 SUPERFAMILY SSF46955 1 126 5.13E-40 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 PANTHER PTHR30204:SF16 1 132 2.3E-75 T 26-04-2016 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 Gene3D G3DSA:1.10.1660.10 55 130 2.0E-31 T 26-04-2016 PAM18_RS25020 b25115bb68686a75a18d18d8467ccf25 132 Gene3D G3DSA:1.10.1660.10 1 54 7.0E-26 T 26-04-2016 PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 497 507 - T 26-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 Gene3D G3DSA:3.40.50.200 225 580 2.0E-34 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 SUPERFAMILY SSF52743 242 539 3.14E-36 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 272 1.5E-6 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 295 308 1.5E-6 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 496 512 1.5E-6 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 PIRSF PIRSF029389 1 590 0.0 T 26-04-2016 IPR016916 Uncharacterised conserved protein UCP029389, subtilisin-related PAM18_RS19380 681b82e2e74e967d2c6ed16593e90660 590 Pfam PF00082 Subtilase family 258 535 3.5E-21 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 Gene3D G3DSA:1.20.120.530 90 214 5.6E-30 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 SUPERFAMILY SSF48008 91 214 9.42E-29 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.6E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.6E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 SUPERFAMILY SSF46785 7 76 2.08E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 PANTHER PTHR11751:SF342 3 108 2.0E-47 T 26-04-2016 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 Gene3D G3DSA:1.10.10.10 7 74 5.7E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 SMART SM00345 13 72 7.8E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 PANTHER PTHR11751 3 108 2.0E-47 T 26-04-2016 PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 Pfam PF07729 FCD domain 94 213 2.4E-28 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 SMART SM00895 92 215 1.2E-19 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS17530 25581296abccfe670802b8c13ca124d4 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 72 4.6E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 147 155 5.9E-28 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 292 307 5.9E-28 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 271 283 5.9E-28 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 123 136 5.9E-28 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 307 318 5.9E-28 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88946 61 169 2.88E-45 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 96 322 3.0E-37 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 292 318 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PANTHER PTHR30603:SF15 31 334 4.6E-184 T 26-04-2016 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88659 230 327 2.62E-25 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04545 Sigma-70, region 4 267 320 3.2E-16 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 PANTHER PTHR30603 31 334 4.6E-184 T 26-04-2016 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 4 333 40.747 T 26-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 123 136 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.10.10 172 221 4.2E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 54 333 2.2E-140 T 26-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF00140 Sigma-70 factor, region 1.2 61 93 3.2E-13 T 26-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04539 Sigma-70 region 3 179 253 2.6E-20 T 26-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04542 Sigma-70 region 2 99 168 6.7E-22 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88659 172 246 5.67E-14 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.601.10 42 168 2.5E-58 T 26-04-2016 PAM18_RS06700 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.10.10 262 328 4.2E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Gene3D G3DSA:3.40.50.970 3 177 1.5E-66 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 SUPERFAMILY SSF52518 356 534 3.32E-58 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 PANTHER PTHR18968:SF129 3 543 0.0 T 26-04-2016 PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Gene3D G3DSA:3.40.50.970 338 532 1.1E-56 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.3E-53 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 SUPERFAMILY SSF52467 154 335 1.8E-38 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Gene3D G3DSA:3.40.50.1220 178 330 9.9E-37 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 SUPERFAMILY SSF52518 3 179 2.54E-48 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 9.6E-39 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 PANTHER PTHR18968 3 543 0.0 T 26-04-2016 PAM18_RS03870 4c48675083c45997b88467d27e099ae4 547 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 319 7.9E-30 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS28830 10852a19e0eef21520b14d1be3a91f85 160 Gene3D G3DSA:3.10.129.10 5 152 1.3E-55 T 26-04-2016 IPR029069 HotDog domain PAM18_RS28830 10852a19e0eef21520b14d1be3a91f85 160 Pfam PF03061 Thioesterase superfamily 23 96 3.9E-19 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS28830 10852a19e0eef21520b14d1be3a91f85 160 PANTHER PTHR11049 4 158 9.9E-73 T 26-04-2016 PAM18_RS28830 10852a19e0eef21520b14d1be3a91f85 160 SUPERFAMILY SSF54637 4 154 6.56E-46 T 26-04-2016 IPR029069 HotDog domain PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PANTHER PTHR22942:SF1 3 335 7.5E-203 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF54752 269 324 8.24E-20 T 26-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 SMART SM00382 57 228 9.7E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.40.50.300 27 267 2.6E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PANTHER PTHR22942 3 335 7.5E-203 T 26-04-2016 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF52540 5 267 5.88E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.30.250.10 269 326 3.2E-26 T 26-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 127 156 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 210 238 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 93 122 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 297 314 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 165 194 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 243 272 8.6E-85 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 ProSitePatterns PS00321 recA signature. 213 221 - T 26-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.98 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-169 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS07045 4a2e2c874a32e8d29b02bf6bcd78e201 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 2.4E-144 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 Pfam PF04715 Anthranilate synthase component I, N terminal region 51 194 5.5E-6 T 26-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PANTHER PTHR11236:SF22 38 523 1.8E-234 T 26-04-2016 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 37 516 2.0E-173 T 26-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 Gene3D G3DSA:3.60.120.10 29 517 5.9E-142 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 SUPERFAMILY SSF56322 36 513 1.2E-138 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PRINTS PR00095 Anthranilate synthase component I signature 462 476 8.9E-20 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PRINTS PR00095 Anthranilate synthase component I signature 447 461 8.9E-20 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PRINTS PR00095 Anthranilate synthase component I signature 353 366 8.9E-20 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PRINTS PR00095 Anthranilate synthase component I signature 367 380 8.9E-20 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PANTHER PTHR11236 38 523 1.8E-234 T 26-04-2016 PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 Pfam PF00425 chorismate binding enzyme 246 505 3.9E-82 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS20660 8b2f7dc0e289652b92bb45133fe370db 530 PIRSF PIRSF001373 4 524 1.8E-217 T 26-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 SUPERFAMILY SSF50447 10 97 1.8E-25 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 PANTHER PTHR33692:SF1 9 178 9.1E-60 T 26-04-2016 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 Pfam PF05239 PRC-barrel domain 101 173 3.2E-7 T 26-04-2016 IPR027275 PRC-barrel domain PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 Gene3D G3DSA:2.30.30.240 104 178 1.7E-30 T 26-04-2016 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 178 24.458 T 26-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 11 177 2.1E-53 T 26-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 Gene3D G3DSA:2.40.30.60 5 97 2.2E-32 T 26-04-2016 IPR002676 RimM protein GO:0006364 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 PANTHER PTHR33692 9 178 9.1E-60 T 26-04-2016 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 Pfam PF01782 RimM N-terminal domain 14 95 2.3E-26 T 26-04-2016 IPR002676 RimM protein GO:0006364 PAM18_RS06085 f91c5d8d5796f8aaab9b196ac9d32b77 178 SUPERFAMILY SSF50346 104 178 2.55E-21 T 26-04-2016 IPR011033 PRC-barrel-like PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PIRSF PIRSF002599 1 69 1.3E-23 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 6 21 1.7E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 41 59 1.7E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 26 35 1.7E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PANTHER PTHR11544:SF63 1 69 5.0E-44 T 26-04-2016 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 SUPERFAMILY SSF50249 3 68 4.41E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 Gene3D G3DSA:2.40.50.140 3 68 1.3E-31 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 PANTHER PTHR11544 1 69 5.0E-44 T 26-04-2016 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 SMART SM00357 5 68 3.6E-29 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS02300 9e2e5c27e8b6374fe031d2d06ee26562 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 4.5E-29 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 6.8E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 6.8E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 6.8E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 PANTHER PTHR30154 1 153 6.0E-97 T 26-04-2016 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.6E-18 T 26-04-2016 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:1.10.10.10 2 54 2.4E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 PANTHER PTHR30154:SF15 1 153 6.0E-97 T 26-04-2016 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF54909 66 153 8.85E-20 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:3.30.70.920 57 141 2.2E-28 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 SMART SM00344 4 113 4.5E-38 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF46785 4 62 3.33E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14355 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.3E-22 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PANTHER PTHR30071 3 225 2.3E-77 T 26-04-2016 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 46 229 2.0E-84 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 101 121 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 205 229 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 157 183 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 122 142 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 63 83 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 46 63 4.6E-59 T 26-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18705 28954ed5d0bd901b6e138caafb1d1ac5 251 Pfam PF01578 Cytochrome C assembly protein 14 185 8.4E-26 T 26-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 Gene3D G3DSA:1.20.140.10 285 449 7.0E-39 T 26-04-2016 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 278 2.7E-12 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 PANTHER PTHR10909:SF289 33 464 8.3E-212 T 26-04-2016 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 Gene3D G3DSA:2.40.110.10 182 284 2.0E-17 T 26-04-2016 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 PANTHER PTHR10909 33 464 8.3E-212 T 26-04-2016 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 SUPERFAMILY SSF47203 295 447 2.74E-40 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 1.3E-28 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 SUPERFAMILY SSF56645 61 299 1.69E-36 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS04915 1514503168a4542094bb0c21b825f202 549 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 Gene3D G3DSA:1.10.1740.10 2 91 9.6E-13 T 26-04-2016 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 Gene3D G3DSA:1.10.10.10 92 154 2.7E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 PANTHER PTHR30173:SF30 4 157 1.7E-64 T 26-04-2016 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 152 1.5E-22 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 SUPERFAMILY SSF88946 2 83 3.18E-13 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 SUPERFAMILY SSF88659 67 155 1.0E-15 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 Pfam PF04542 Sigma-70 region 2 2 65 1.0E-9 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 Pfam PF08281 Sigma-70, region 4 98 149 2.3E-14 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13650 5e1ccabfe5c4f0bfa08426b4376de26f 159 PANTHER PTHR30173 4 157 1.7E-64 T 26-04-2016 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 SUPERFAMILY SSF46785 1 80 1.85E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:3.40.190.10 92 176 2.0E-16 T 26-04-2016 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:1.10.10.10 3 89 4.7E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:3.40.190.10 177 264 2.0E-23 T 26-04-2016 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-51 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 PANTHER PTHR30126 2 308 1.6E-153 T 26-04-2016 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.9E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 PANTHER PTHR30126:SF5 2 308 1.6E-153 T 26-04-2016 PAM18_RS28405 e78e92ef48c5726a543a5a62c6dd0d53 311 SUPERFAMILY SSF53850 91 294 3.02E-45 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 Gene3D G3DSA:1.10.10.10 2 76 1.1E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 PANTHER PTHR30126 1 284 2.6E-65 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 Gene3D G3DSA:3.40.190.10 83 183 4.6E-21 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 6.3E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 Pfam PF03466 LysR substrate binding domain 81 283 5.6E-40 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 PANTHER PTHR30126:SF11 1 284 2.6E-65 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 SUPERFAMILY SSF53850 82 285 7.96E-34 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 Gene3D G3DSA:3.40.190.10 184 250 4.8E-12 T 26-04-2016 PAM18_RS21555 c364fe6bd38dd71068999ddf6a94e9cb 294 SUPERFAMILY SSF46785 3 105 3.54E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19700 59bb7f814d400f2394dec1701116a9a7 200 Pfam PF13505 Outer membrane protein beta-barrel domain 9 200 1.6E-10 T 26-04-2016 IPR027385 Outer membrane protein beta-barrel PAM18_RS19700 59bb7f814d400f2394dec1701116a9a7 200 TIGRFAM TIGR03304 OMP85_target: outer membrane insertion C-terminal signal 191 200 0.22 T 26-04-2016 IPR017690 Outer membrane insertion C-terminal signal, omp85 target PAM18_RS19700 59bb7f814d400f2394dec1701116a9a7 200 SUPERFAMILY SSF56925 45 200 1.86E-18 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS19700 59bb7f814d400f2394dec1701116a9a7 200 Gene3D G3DSA:2.40.160.20 50 200 1.7E-9 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 SUPERFAMILY SSF50022 11 164 9.56E-45 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 26-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 Gene3D G3DSA:2.102.10.10 45 154 1.2E-21 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PANTHER PTHR21266 1 379 1.6E-174 T 26-04-2016 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 1.9E-20 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 SUPERFAMILY SSF55961 164 445 1.33E-70 T 26-04-2016 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PANTHER PTHR21266:SF30 1 379 1.6E-174 T 26-04-2016 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 9 438 5.6E-262 T 26-04-2016 IPR017639 Benzoate 1,2-dioxygenase, large subunit PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 148 174 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 6.1E-46 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 196 385 4.1E-18 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS12995 e0349d054c4a251e94512d34dae785f1 455 Gene3D G3DSA:3.90.380.10 155 446 4.3E-90 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Gene3D G3DSA:3.40.50.300 273 526 8.4E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 3.8E-5 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 503 528 0.0013 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Pfam PF00005 ABC transporter 26 184 2.6E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Pfam PF00005 ABC transporter 302 452 2.2E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 SUPERFAMILY SSF52540 275 523 3.33E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 ProSitePatterns PS00211 ABC transporters family signature. 424 438 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 PANTHER PTHR24220:SF574 7 410 1.2E-208 T 26-04-2016 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 SMART SM00382 310 501 2.9E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 SMART SM00382 34 234 4.3E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 PANTHER PTHR24220 7 410 1.2E-208 T 26-04-2016 PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 SUPERFAMILY SSF52540 5 256 2.55E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16580 578523952fefff020f0eafd44fc31ebc 536 Gene3D G3DSA:3.40.50.300 2 259 2.6E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PANTHER PTHR21342:SF1 1 159 1.8E-83 T 26-04-2016 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.6E-50 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.6E-50 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.6E-50 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.6E-50 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.6E-50 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 SUPERFAMILY SSF52374 1 156 4.29E-47 T 26-04-2016 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 94 1.0E-5 T 26-04-2016 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 1.0E-59 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 PANTHER PTHR21342 1 159 1.8E-83 T 26-04-2016 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 Pfam PF01467 Cytidylyltransferase-like 5 133 7.7E-24 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.504 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 4.2E-20 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 SMART SM00764 12 153 0.0096 T 26-04-2016 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 PAM18_RS01830 78e6ca3073c342d1ff05d89bf42d4dc8 159 Gene3D G3DSA:3.40.50.620 1 157 1.2E-56 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 Gene3D G3DSA:1.20.245.10 281 683 2.8E-111 T 26-04-2016 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 PRINTS PR00087 Lipoxygenase signature 354 371 4.5E-8 T 26-04-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 PRINTS PR00087 Lipoxygenase signature 392 412 4.5E-8 T 26-04-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 PRINTS PR00087 Lipoxygenase signature 372 389 4.5E-8 T 26-04-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1. 372 386 - T 26-04-2016 IPR020833 Lipoxygenase, iron binding site GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 Pfam PF00305 Lipoxygenase 226 667 4.8E-60 T 26-04-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 SUPERFAMILY SSF48484 197 685 1.14E-136 T 26-04-2016 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 ProSitePatterns PS00081 Lipoxygenases iron-binding region signature 2. 399 409 - T 26-04-2016 IPR020834 Lipoxygenase, conserved site GO:0016702|GO:0046872|GO:0055114 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 PANTHER PTHR11771:SF32 210 685 0.0 T 26-04-2016 PAM18_RS19745 468ca820a4a28697900c926ce5a6ebfa 685 PANTHER PTHR11771 210 685 0.0 T 26-04-2016 IPR000907 Lipoxygenase GO:0016702|GO:0046872|GO:0055114 PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.20.120.530 83 229 1.3E-34 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 PANTHER PTHR11751 19 106 1.4E-60 T 26-04-2016 PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 PANTHER PTHR11751:SF426 19 106 1.4E-60 T 26-04-2016 PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.10.10.10 6 80 3.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00345 22 80 1.7E-13 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF48008 87 224 1.2E-28 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF07729 FCD domain 90 216 6.1E-30 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00895 90 217 2.3E-26 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF46785 13 108 8.81E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21650 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 8.6E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS14495 b57365fa5d80e0317eb7845564805f5d 416 Gene3D G3DSA:2.40.160.10 34 416 8.9E-147 T 26-04-2016 IPR023614 Porin domain PAM18_RS14495 b57365fa5d80e0317eb7845564805f5d 416 PANTHER PTHR34596 1 416 1.1E-180 T 26-04-2016 PAM18_RS14495 b57365fa5d80e0317eb7845564805f5d 416 Pfam PF03573 outer membrane porin, OprD family 29 414 4.3E-156 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SMART SM00490 824 908 1.2E-15 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Pfam PF03461 TRCF domain 1007 1098 4.9E-27 T 26-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1105 28.986 T 26-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 907 7.8E-17 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1079 0.0 T 26-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SMART SM00487 598 788 3.1E-35 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Gene3D G3DSA:3.40.50.300 792 954 6.0E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Gene3D G3DSA:3.30.2060.10 130 207 5.6E-13 T 26-04-2016 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 PANTHER PTHR14025:SF21 382 1143 0.0 T 26-04-2016 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 PANTHER PTHR14025 382 1143 0.0 T 26-04-2016 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF143517 992 1144 1.01E-43 T 26-04-2016 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF52540 522 781 1.36E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Gene3D G3DSA:3.40.50.300 591 784 2.8E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Pfam PF02559 CarD-like/TRCF domain 478 573 7.1E-24 T 26-04-2016 IPR003711 CarD-like/TRCF domain PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF52540 780 988 7.92E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF52540 10 340 1.33E-107 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF52540 351 464 2.6E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 Pfam PF00270 DEAD/DEAH box helicase 603 763 7.9E-19 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SMART SM01058 477 574 1.2E-48 T 26-04-2016 IPR003711 CarD-like/TRCF domain PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SUPERFAMILY SSF141259 469 546 5.36E-23 T 26-04-2016 IPR003711 CarD-like/TRCF domain PAM18_RS10060 c1d5b62403b3b0c526dbac61d5ded612 1148 SMART SM00982 1006 1106 2.3E-50 T 26-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PAM18_RS06220 a7926c9a322aa66bdc6a77e94b57ad53 413 SUPERFAMILY SSF103473 10 395 2.09E-47 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS06220 a7926c9a322aa66bdc6a77e94b57ad53 413 Pfam PF07690 Major Facilitator Superfamily 25 334 2.0E-27 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS06220 a7926c9a322aa66bdc6a77e94b57ad53 413 PANTHER PTHR23501 17 410 1.1E-23 T 26-04-2016 PAM18_RS06220 a7926c9a322aa66bdc6a77e94b57ad53 413 Gene3D G3DSA:1.20.1250.20 17 186 1.3E-20 T 26-04-2016 PAM18_RS06220 a7926c9a322aa66bdc6a77e94b57ad53 413 Gene3D G3DSA:1.20.1250.20 211 394 4.4E-15 T 26-04-2016 PAM18_RS07865 6ca111a5de0aa72deab474684ebfd520 185 PANTHER PTHR40057 1 185 3.9E-71 T 26-04-2016 PAM18_RS07865 6ca111a5de0aa72deab474684ebfd520 185 SUPERFAMILY SSF54909 3 103 7.15E-19 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS07865 6ca111a5de0aa72deab474684ebfd520 185 PANTHER PTHR40057:SF1 1 185 3.9E-71 T 26-04-2016 PAM18_RS07865 6ca111a5de0aa72deab474684ebfd520 185 Gene3D G3DSA:3.30.70.900 6 93 7.8E-12 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF01743 Poly A polymerase head domain 4 122 3.7E-18 T 26-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 9.3E-13 T 26-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 SUPERFAMILY SSF81301 1 119 1.42E-29 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 55.26 T 26-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 PANTHER PTHR13734 1 237 5.5E-75 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.308 T 26-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Gene3D G3DSA:3.30.460.10 1 121 3.5E-30 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 PIRSF PIRSF000813 1 408 1.3E-201 T 26-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Gene3D G3DSA:1.10.3090.10 122 360 1.3E-52 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 SUPERFAMILY SSF81891 120 401 7.06E-52 T 26-04-2016 PAM18_RS02960 9e1eac24594e5b55056bc896e459d8fe 410 Pfam PF01966 HD domain 231 320 7.3E-8 T 26-04-2016 IPR006674 HD domain PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 227 2.1E-56 T 26-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 Gene3D G3DSA:3.20.20.70 5 231 2.8E-86 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 SUPERFAMILY SSF51366 5 230 2.07E-73 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 SMART SM00934 7 227 1.3E-99 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 26-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 PANTHER PTHR32119:SF2 5 232 2.7E-110 T 26-04-2016 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 226 2.0E-53 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 PANTHER PTHR32119 5 232 2.7E-110 T 26-04-2016 PAM18_RS10705 32c0ed00d7eccedb69c54a3ddd3597bd 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 39.575 T 26-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 95 181 7.67E-15 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 PANTHER PTHR34875 1 184 1.6E-60 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 Pfam PF13740 ACT domain 9 83 1.2E-14 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 7 87 5.49E-9 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 97 181 3.1E-14 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 PANTHER PTHR34875:SF3 1 184 1.6E-60 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 7 88 1.4E-11 T 26-04-2016 PAM18_RS20620 565e643b18a769b6be672bc6e2e3b762 185 PIRSF PIRSF028103 7 182 3.4E-67 T 26-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 SUPERFAMILY SSF88697 3 69 5.3E-16 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 Gene3D G3DSA:2.40.240.20 1 68 7.2E-24 T 26-04-2016 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 Gene3D G3DSA:3.40.1280.10 75 239 2.2E-63 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 Pfam PF04452 RNA methyltransferase 19 233 4.0E-71 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 PIRSF PIRSF015601 3 238 5.0E-59 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 237 7.0E-62 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 SUPERFAMILY SSF75217 74 239 6.98E-54 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 PANTHER PTHR30027:SF3 1 240 1.2E-93 T 26-04-2016 PAM18_RS02120 badf5252013819c892a3890308fdd69f 240 PANTHER PTHR30027 1 240 1.2E-93 T 26-04-2016 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946:SF7 244 586 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946:SF7 631 873 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946:SF7 1 206 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 872 23.377 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946 244 586 0.0 T 26-04-2016 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946 631 873 0.0 T 26-04-2016 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PANTHER PTHR11946 1 206 0.0 T 26-04-2016 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Pfam PF08264 Anticodon-binding domain of tRNA 715 834 1.3E-14 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 413 7.2E-68 T 26-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:1.10.730.10 661 808 2.9E-42 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 665 4.1E-7 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 428 584 6.1E-8 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:3.40.50.620 631 660 1.1E-153 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:3.40.50.620 4 225 1.1E-153 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:3.40.50.620 427 585 1.1E-153 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.5E-19 T 26-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 SUPERFAMILY SSF47323 675 872 9.53E-34 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:3.90.740.10 226 272 9.8E-43 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 Gene3D G3DSA:3.90.740.10 306 425 9.8E-43 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 579 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 536 558 6.8E-51 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 872 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 SUPERFAMILY SSF50677 226 424 1.26E-49 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 SUPERFAMILY SSF52374 426 681 9.21E-151 T 26-04-2016 PAM18_RS04840 603673aef9e28bb5d1f6bd93e7693421 873 SUPERFAMILY SSF52374 5 226 9.21E-151 T 26-04-2016 PAM18_RS24950 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Pfam PF01475 Ferric uptake regulator family 9 129 1.3E-45 T 26-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PAM18_RS24950 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Gene3D G3DSA:1.10.10.10 5 81 2.1E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS24950 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 SUPERFAMILY SSF46785 6 131 4.89E-41 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS24950 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 PANTHER PTHR33202 6 129 7.2E-39 T 26-04-2016 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PIRSF PIRSF000729 4 372 8.8E-130 T 26-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PANTHER PTHR11063:SF6 9 372 1.4E-120 T 26-04-2016 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 37.056 T 26-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 6.0E-130 T 26-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 SMART SM00359 281 364 3.2E-16 T 26-04-2016 IPR002478 PUA domain GO:0003723 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 5.2E-52 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 5.2E-52 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 5.2E-52 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.2E-52 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 5.2E-52 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:3.40.1160.10 4 264 4.5E-58 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 PANTHER PTHR11063 9 372 1.4E-120 T 26-04-2016 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF01472 PUA domain 281 354 9.5E-23 T 26-04-2016 IPR002478 PUA domain GO:0003723 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF88697 280 371 1.6E-24 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:2.30.130.10 278 370 1.8E-26 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF00696 Amino acid kinase family 10 238 5.3E-47 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF53633 9 261 6.41E-69 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS23805 1409803a3405e07fa3f066efc2ae5149 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 26-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS06230 f54e57caa05a6f8723886ca6b84dea00 568 Pfam PF14903 WG containing repeat 316 336 0.007 T 26-04-2016 IPR032774 WG containing repeat PAM18_RS06230 f54e57caa05a6f8723886ca6b84dea00 568 Pfam PF14903 WG containing repeat 130 164 5.1E-4 T 26-04-2016 IPR032774 WG containing repeat PAM18_RS06230 f54e57caa05a6f8723886ca6b84dea00 568 PANTHER PTHR37841 2 567 1.2E-122 T 26-04-2016 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 Gene3D G3DSA:3.60.110.10 51 102 1.3E-26 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 Gene3D G3DSA:3.60.110.10 145 284 1.3E-26 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 Pfam PF00795 Carbon-nitrogen hydrolase 160 285 1.2E-9 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 PANTHER PTHR23088 1 82 1.1E-98 T 26-04-2016 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 PANTHER PTHR23088 157 372 1.1E-98 T 26-04-2016 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 PANTHER PTHR23088:SF15 1 82 1.1E-98 T 26-04-2016 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 PANTHER PTHR23088:SF15 157 372 1.1E-98 T 26-04-2016 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 SUPERFAMILY SSF56317 62 106 1.7E-25 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS09615 a9c1d2294a3518f4c28d1ab4390d65e8 372 SUPERFAMILY SSF56317 146 284 1.7E-25 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 PANTHER PTHR30353 3 413 3.3E-257 T 26-04-2016 IPR032818 DedA family PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 PANTHER PTHR30353:SF5 3 413 3.3E-257 T 26-04-2016 PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 Pfam PF09335 SNARE associated Golgi protein 38 160 1.6E-18 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 SUPERFAMILY SSF48317 207 418 2.8E-44 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 Gene3D G3DSA:1.20.144.10 208 404 5.1E-39 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 Pfam PF01569 PAP2 superfamily 285 397 4.4E-21 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS04725 e20818a321c21a1019100b74cbf8c25f 437 SMART SM00014 281 391 5.4E-16 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PANTHER PTHR24322:SF343 19 146 5.7E-70 T 26-04-2016 PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PANTHER PTHR24322:SF343 163 195 5.7E-70 T 26-04-2016 PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.8E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 Gene3D G3DSA:3.40.50.720 8 254 4.1E-78 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 194 0.0013 T 26-04-2016 PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 4.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PANTHER PTHR24322 19 146 5.7E-70 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 PANTHER PTHR24322 163 195 5.7E-70 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 SUPERFAMILY SSF51735 14 253 3.48E-76 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00920 16104005cf7ee8e923e169ed8fa7fe40 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 253 3.3E-61 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 265 315 1.5E-14 T 26-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Pfam PF00009 Elongation factor Tu GTP binding domain 344 501 1.8E-34 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 838 17.303 T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Gene3D G3DSA:3.30.56.50 2 51 1.0E-20 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 SUPERFAMILY SSF50447 742 838 2.75E-32 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Gene3D G3DSA:2.40.30.10 742 838 1.7E-37 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 SUPERFAMILY SSF52540 332 510 1.71E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 SUPERFAMILY SSF50447 513 595 1.79E-26 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Gene3D G3DSA:3.40.50.10050 640 719 8.6E-22 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 ProSitePatterns PS01176 Initiation factor 2 signature. 791 813 - T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Gene3D G3DSA:3.40.50.300 337 500 1.9E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 343 499 2.7E-31 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 PANTHER PTHR23115:SF184 693 840 5.7E-207 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 PANTHER PTHR23115:SF184 325 668 5.7E-207 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Pfam PF11987 Translation-initiation factor 2 625 730 1.6E-34 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Gene3D G3DSA:2.40.30.10 511 604 1.6E-26 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 SUPERFAMILY SSF46955 3 51 5.86E-10 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 SUPERFAMILY SSF52156 621 747 5.75E-34 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 259 839 1.4E-263 T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 3.2E-11 T 26-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 PANTHER PTHR23115 693 840 5.7E-207 T 26-04-2016 PAM18_RS24840 2f0064532ca15386b03c07de53750bfe 840 PANTHER PTHR23115 325 668 5.7E-207 T 26-04-2016 PAM18_RS07310 fbacec979a446cd522f9285d4191a52a 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 79 1.2E-23 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS07310 fbacec979a446cd522f9285d4191a52a 97 SUPERFAMILY SSF54909 1 95 3.83E-30 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS07310 fbacec979a446cd522f9285d4191a52a 97 PANTHER PTHR33336 1 93 8.9E-25 T 26-04-2016 PAM18_RS07310 fbacec979a446cd522f9285d4191a52a 97 PANTHER PTHR33336:SF5 1 93 8.9E-25 T 26-04-2016 PAM18_RS07310 fbacec979a446cd522f9285d4191a52a 97 Gene3D G3DSA:3.30.70.900 2 94 1.3E-34 T 26-04-2016 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 PANTHER PTHR21225:SF5 27 364 5.4E-239 T 26-04-2016 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 Pfam PF00793 DAHP synthetase I family 60 353 1.4E-78 T 26-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 Gene3D G3DSA:3.20.20.70 29 364 8.0E-132 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 PIRSF PIRSF001361 14 364 4.8E-145 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 27 364 5.7E-130 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 SUPERFAMILY SSF51569 28 361 4.81E-118 T 26-04-2016 PAM18_RS10365 ff3262cf716457560ff7c6945f693f15 364 PANTHER PTHR21225 27 364 5.4E-239 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 131 153 0.0071 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 86 108 0.12 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 63 85 2.1E-4 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 154 175 0.075 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 224 245 0.31 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 109 124 0.86 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 40 60 0.038 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 177 199 2.7E-4 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 200 222 6.6E-6 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 269 291 0.037 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF52129 392 530 6.45E-6 T 26-04-2016 IPR029030 Caspase-like domain PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 35 122 2.09E-20 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 152 173 6.6 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 129 150 6.6 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 244 265 21.0 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 84 105 0.56 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 61 82 13.0 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 38 59 4.0 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 175 196 3.1 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 107 128 1.5 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 198 219 4.1E-5 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 267 288 8.0 T 26-04-2016 IPR003409 MORN motif PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF01650 Peptidase C13 family 342 547 1.2E-43 T 26-04-2016 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 PANTHER PTHR23084:SF131 38 428 4.0E-83 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 PANTHER PTHR23084 38 428 4.0E-83 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 127 192 2.0E-14 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 193 301 2.0E-23 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 34 124 1.2E-19 T 26-04-2016 PAM18_RS04700 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 127 248 4.71E-25 T 26-04-2016 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Gene3D G3DSA:3.40.1190.10 84 317 8.3E-69 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 PANTHER PTHR23135 12 450 1.5E-164 T 26-04-2016 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 451 33.894 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Pfam PF01225 Mur ligase family, catalytic domain 26 94 7.6E-10 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Gene3D G3DSA:3.90.190.20 319 451 1.9E-42 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 450 2.0E-148 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 SUPERFAMILY SSF53244 320 450 5.26E-34 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 391 2.2E-12 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Pfam PF08245 Mur ligase middle domain 108 300 1.3E-47 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 PANTHER PTHR23135:SF3 12 450 1.5E-164 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 Gene3D G3DSA:3.40.1390.10 4 82 2.4E-24 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 SUPERFAMILY SSF63418 5 98 7.06E-25 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23030 77ec8ac86e144313731ee11d295a2ca2 458 SUPERFAMILY SSF53623 103 318 6.02E-53 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 0.001 T 26-04-2016 PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PIRSF PIRSF000126 1 263 1.3E-69 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 Pfam PF00106 short chain dehydrogenase 4 192 2.3E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PANTHER PTHR24322:SF330 7 136 2.5E-54 T 26-04-2016 PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PANTHER PTHR24322:SF330 152 184 2.5E-54 T 26-04-2016 PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PANTHER PTHR24322 7 136 2.5E-54 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 PANTHER PTHR24322 152 184 2.5E-54 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 Gene3D G3DSA:3.40.50.720 3 255 3.3E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03240 d75f0d17743355175e3bedfa3323b966 266 SUPERFAMILY SSF51735 3 256 6.27E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 Gene3D G3DSA:1.10.760.10 332 473 5.2E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600 258 473 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600 185 233 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600 26 111 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PIRSF PIRSF028099 3 473 2.5E-190 T 26-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600:SF4 258 473 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600:SF4 185 233 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 PANTHER PTHR30600:SF4 26 111 5.6E-178 T 26-04-2016 PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 36 473 1.2E-139 T 26-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase PAM18_RS22800 242e5f3df3ca6209c76b05b05f35a970 473 SUPERFAMILY SSF46626 330 473 3.58E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 Gene3D G3DSA:1.10.10.10 184 241 1.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 SUPERFAMILY SSF46894 171 241 3.74E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 SUPERFAMILY SSF75516 9 172 3.79E-39 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 PANTHER PTHR26402:SF432 44 235 5.4E-63 T 26-04-2016 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 PANTHER PTHR26402 44 235 5.4E-63 T 26-04-2016 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 SMART SM00421 178 235 8.9E-20 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 Gene3D G3DSA:3.30.450.80 10 183 2.6E-41 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 Pfam PF03472 Autoinducer binding domain 26 162 6.1E-36 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 ProSitePatterns PS00622 LuxR-type HTH domain signature. 195 222 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07655 420e996a0adeb596fc5d923200c7aaaa 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 2.8E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 SUPERFAMILY SSF52833 3 194 1.25E-66 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 2.9E-14 T 26-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 PIRSF PIRSF000239 1 199 2.5E-59 T 26-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 PANTHER PTHR10681 3 194 1.4E-84 T 26-04-2016 PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF00578 AhpC/TSA family 5 139 3.9E-33 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 Gene3D G3DSA:3.40.30.10 2 156 1.5E-55 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07500 4753120b7a07a97bcafd8db12c3c6536 200 Gene3D G3DSA:3.30.1020.10 157 194 5.1E-16 T 26-04-2016 PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 Gene3D G3DSA:3.40.50.720 209 447 3.3E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PANTHER PTHR24322 357 388 7.5E-80 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PANTHER PTHR24322 219 341 7.5E-80 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 357 376 2.3E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 284 295 2.3E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 337 345 2.3E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PANTHER PTHR24322:SF438 357 388 7.5E-80 T 26-04-2016 PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PANTHER PTHR24322:SF438 219 341 7.5E-80 T 26-04-2016 PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 411 431 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 331 347 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 395 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 357 376 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 284 295 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 3.7E-31 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 344 372 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 221 445 1.0E-49 T 26-04-2016 PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 SUPERFAMILY SSF51735 210 447 3.5E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25065 128ab65d00b2d5897bcc9a8b23375733 451 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 215 388 4.8E-7 T 26-04-2016 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 Pfam PF01386 Ribosomal L25p family 6 94 5.1E-27 T 26-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 175 2.1E-45 T 26-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 190 4.1E-29 T 26-04-2016 IPR020057 Ribosomal protein L25, beta domain PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 SUPERFAMILY SSF50715 4 196 1.73E-55 T 26-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.687 T 26-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 97 1.0E-45 T 26-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 Gene3D G3DSA:2.40.240.10 5 97 1.4E-32 T 26-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 PANTHER PTHR33284 1 204 3.3E-63 T 26-04-2016 PAM18_RS24365 ab3a69d462ce25ee28348799c1a5603f 204 Gene3D G3DSA:2.170.120.20 100 196 6.4E-30 T 26-04-2016 IPR020057 Ribosomal protein L25, beta domain PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 SMART SM00382 382 575 3.7E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 Gene3D G3DSA:3.40.50.300 356 588 7.6E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 15 595 1.2E-256 T 26-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 Pfam PF00005 ABC transporter 373 523 5.9E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 SUPERFAMILY SSF52540 346 591 1.22E-94 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 SUPERFAMILY SSF90123 18 338 3.4E-71 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 PANTHER PTHR24221 6 602 1.1E-228 T 26-04-2016 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 Pfam PF00664 ABC transporter transmembrane region 31 306 1.6E-48 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS26150 6f8af20291b0910e9cf18dc113d69881 603 Gene3D G3DSA:1.20.1560.10 18 338 8.7E-70 T 26-04-2016 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 9 201 1.5E-75 T 26-04-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 PANTHER PTHR33711:SF2 1 201 4.9E-92 T 26-04-2016 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 SUPERFAMILY SSF49482 5 201 8.63E-58 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 PANTHER PTHR33711 1 201 4.9E-92 T 26-04-2016 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 Pfam PF00775 Dioxygenase 39 191 5.4E-13 T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS00780 fcb78c0557e0b1c209e3ca3acad16299 201 Gene3D G3DSA:2.60.130.10 5 201 7.7E-65 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 Gene3D G3DSA:1.10.3720.10 8 219 2.2E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 PANTHER PTHR30133 2 228 3.6E-165 T 26-04-2016 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 5.4E-18 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 SUPERFAMILY SSF161098 8 206 1.31E-41 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 3.3E-26 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10460 dc2101a1773031c354bee6be022e66e7 229 PANTHER PTHR30133:SF1 2 228 3.6E-165 T 26-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 120 1.0E-19 T 26-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 61 120 13.282 T 26-04-2016 IPR022943 Preprotein translocase subunit SecE PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 63 83 9.4E-27 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 42 63 9.4E-27 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 87 107 9.4E-27 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 107 122 9.4E-27 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 66 122 2.1E-20 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PANTHER PTHR33910 1 122 1.1E-28 T 26-04-2016 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 PANTHER PTHR33910:SF1 1 122 1.1E-28 T 26-04-2016 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 26-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 PAM18_RS03360 3240d2d2708734037cd547b4389ceb8c 122 Gene3D G3DSA:1.20.5.1030 62 120 3.0E-24 T 26-04-2016 PAM18_RS07360 3e6b342681132053db99f75e67154665 115 PANTHER PTHR30561 1 114 3.0E-31 T 26-04-2016 PAM18_RS07360 3e6b342681132053db99f75e67154665 115 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 115 29.102 T 26-04-2016 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE UniPathway: UPA00030 PAM18_RS07360 3e6b342681132053db99f75e67154665 115 Pfam PF00892 EamA-like transporter family 39 111 5.5E-9 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS07360 3e6b342681132053db99f75e67154665 115 PANTHER PTHR30561:SF9 1 114 3.0E-31 T 26-04-2016 PAM18_RS07360 3e6b342681132053db99f75e67154665 115 SUPERFAMILY SSF103481 34 113 2.09E-13 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 SUPERFAMILY SSF56784 385 568 2.68E-38 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 SUPERFAMILY SSF56784 303 327 2.68E-38 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Pfam PF00122 E1-E2 ATPase 85 306 8.6E-38 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PANTHER PTHR24093:SF49 28 595 0.0 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PANTHER PTHR24093:SF49 633 684 0.0 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 353 4.1E-30 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 385 606 9.7E-42 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 28 685 1.3E-291 T 26-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Gene3D G3DSA:3.40.50.1000 452 571 5.7E-36 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Gene3D G3DSA:2.70.150.10 62 218 1.0E-21 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 538 5.3E-32 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 SUPERFAMILY SSF81653 123 217 1.11E-19 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 ProSitePatterns PS01229 Hypothetical cof family signature 2. 524 546 - T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PANTHER PTHR24093 28 595 0.0 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PANTHER PTHR24093 633 684 0.0 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 SUPERFAMILY SSF81665 47 116 3.92E-10 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 SUPERFAMILY SSF81665 218 309 3.92E-10 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Gene3D G3DSA:3.40.1110.10 326 451 4.0E-36 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 24 688 40.163 T 26-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 4.3E-22 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 4.3E-22 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 4.3E-22 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 4.3E-22 T 26-04-2016 PAM18_RS17495 d7dc4deddccae41b8d778a9cbc942bae 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 4.3E-22 T 26-04-2016 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 SUPERFAMILY SSF53383 12 313 1.79E-56 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 PANTHER PTHR11751:SF3 3 331 1.4E-68 T 26-04-2016 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 Gene3D G3DSA:3.40.640.10 43 234 1.5E-46 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 322 3.5E-111 T 26-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 Gene3D G3DSA:3.90.1150.10 235 302 4.8E-4 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 PANTHER PTHR11751 3 331 1.4E-68 T 26-04-2016 PAM18_RS19195 77ca2123d8e2c613c0e10ce20f8e8b09 331 Pfam PF00155 Aminotransferase class I and II 54 308 6.1E-31 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 Pfam PF01551 Peptidase family M23 131 224 2.9E-27 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 Pfam PF01476 LysM domain 36 76 1.3E-12 T 26-04-2016 IPR018392 LysM domain PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 Gene3D G3DSA:2.70.70.10 92 229 2.3E-35 T 26-04-2016 PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 SUPERFAMILY SSF51261 36 228 4.5E-45 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 Gene3D G3DSA:3.10.350.10 35 76 4.3E-15 T 26-04-2016 IPR018392 LysM domain PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 PANTHER PTHR21666 112 230 1.7E-38 T 26-04-2016 PAM18_RS25765 3464a94b9bdd9bc82415b6415e45cf4a 231 SMART SM00257 35 79 3.5E-11 T 26-04-2016 IPR018392 LysM domain PAM18_RS21690 cf7cc224abb42244ab8be921c3eb8808 471 PANTHER PTHR11785:SF29 6 460 2.3E-292 T 26-04-2016 PAM18_RS21690 cf7cc224abb42244ab8be921c3eb8808 471 PIRSF PIRSF006060 1 465 1.3E-74 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS21690 cf7cc224abb42244ab8be921c3eb8808 471 PANTHER PTHR11785 6 460 2.3E-292 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS21690 cf7cc224abb42244ab8be921c3eb8808 471 Pfam PF00324 Amino acid permease 22 450 2.0E-117 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS21690 cf7cc224abb42244ab8be921c3eb8808 471 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 Gene3D G3DSA:1.10.3720.10 22 257 8.3E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 Gene3D G3DSA:1.10.3720.10 282 510 3.9E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 504 4.6E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 248 7.8E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 SUPERFAMILY SSF161098 278 511 1.44E-31 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 PANTHER PTHR30193 10 264 1.5E-104 T 26-04-2016 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 PANTHER PTHR30193:SF3 10 264 1.5E-104 T 26-04-2016 PAM18_RS24525 f91d817240f44c2c3babbf65731dc775 520 SUPERFAMILY SSF161098 16 258 1.11E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 Gene3D G3DSA:3.90.180.10 1 188 9.2E-54 T 26-04-2016 IPR011032 GroES-like PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 SMART SM00829 8 386 0.0043 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 SUPERFAMILY SSF50129 1 196 1.67E-58 T 26-04-2016 IPR011032 GroES-like PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 Gene3D G3DSA:3.40.50.720 189 330 1.1E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 2.0E-7 T 26-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 Pfam PF00107 Zinc-binding dehydrogenase 197 268 6.7E-11 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 150 6.6E-29 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695 12 106 4.7E-168 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695 127 266 4.7E-168 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695 288 388 4.7E-168 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 SUPERFAMILY SSF51735 164 349 9.63E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695:SF281 12 106 4.7E-168 T 26-04-2016 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695:SF281 127 266 4.7E-168 T 26-04-2016 PAM18_RS14630 4c411f0bfdafc156928417519d413c38 388 PANTHER PTHR11695:SF281 288 388 4.7E-168 T 26-04-2016 PAM18_RS04255 c0948c004a24f79fdb496a89fb80b555 169 PANTHER PTHR33452:SF7 3 169 1.3E-104 T 26-04-2016 PAM18_RS04255 c0948c004a24f79fdb496a89fb80b555 169 PANTHER PTHR33452 3 169 1.3E-104 T 26-04-2016 PAM18_RS04255 c0948c004a24f79fdb496a89fb80b555 169 Pfam PF07681 DoxX 25 110 2.6E-20 T 26-04-2016 IPR032808 DoxX family PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:2.30.30.40 582 625 9.1E-25 T 26-04-2016 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:2.30.30.40 493 514 9.1E-25 T 26-04-2016 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SMART SM00260 485 626 4.6E-34 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SUPERFAMILY SSF47384 247 309 1.26E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PANTHER PTHR22617 4 625 9.3E-277 T 26-04-2016 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 247 308 5.2E-18 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SMART SM00073 5 102 5.6E-30 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 PANTHER PTHR22617:SF20 4 625 9.3E-277 T 26-04-2016 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:2.40.50.180 516 581 8.9E-11 T 26-04-2016 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SUPERFAMILY SSF50341 492 625 1.57E-30 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SUPERFAMILY SSF47226 4 127 1.57E-33 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SUPERFAMILY SSF55874 310 491 3.8E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Pfam PF01584 CheW-like domain 498 625 2.0E-26 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 492 1.5E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Pfam PF01627 Hpt domain 7 105 9.2E-22 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SMART SM01231 245 308 1.5E-23 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:3.30.565.10 310 492 2.9E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:1.10.287.560 247 309 2.2E-23 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 SMART SM00387 353 493 1.2E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00900 363a0a20579cdfa5bf98e7e07983a74e 639 Gene3D G3DSA:1.20.120.160 3 127 2.4E-40 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 PANTHER PTHR10438:SF244 219 265 2.0E-28 T 26-04-2016 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 PANTHER PTHR10438:SF244 155 195 2.0E-28 T 26-04-2016 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 Pfam PF00578 AhpC/TSA family 133 244 6.2E-15 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 SUPERFAMILY SSF52833 106 264 1.06E-32 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 PANTHER PTHR10438 219 265 2.0E-28 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 PANTHER PTHR10438 155 195 2.0E-28 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS13195 5a922cd91d5fb26e16e8ede0fecd9080 278 Gene3D G3DSA:3.40.30.10 129 265 1.4E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 SUPERFAMILY SSF53067 234 470 1.84E-45 T 26-04-2016 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 PANTHER PTHR10196:SF9 3 471 1.4E-149 T 26-04-2016 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 PIRSF PIRSF000538 1 471 1.6E-100 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 241 428 1.2E-29 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 SUPERFAMILY SSF53067 3 235 3.11E-66 T 26-04-2016 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 215 2.7E-48 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 Gene3D G3DSA:3.30.420.40 3 232 3.7E-67 T 26-04-2016 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 342 362 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 Gene3D G3DSA:3.30.420.40 234 470 1.7E-52 T 26-04-2016 PAM18_RS18650 c9e68b844c68675372f749762350c9b6 471 PANTHER PTHR10196 3 471 1.4E-149 T 26-04-2016 PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF48498 79 187 2.91E-18 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 Gene3D G3DSA:1.10.357.10 3 187 2.0E-27 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 PANTHER PTHR30328:SF7 9 187 4.3E-57 T 26-04-2016 PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 PANTHER PTHR30328 9 187 4.3E-57 T 26-04-2016 PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 6.1E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS02405 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF46689 8 72 1.64E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 455 485 8.6E-11 T 26-04-2016 IPR013425 Autotransporter-associated beta strand repeat PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 Pfam PF00082 Subtilase family 70 359 3.8E-38 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 118 131 9.2E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 70 89 9.2E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 305 321 9.2E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 306 316 - T 26-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 521 995 1.6E-48 T 26-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 122 132 - T 26-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 SUPERFAMILY SSF52743 49 369 5.89E-60 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 Pfam PF12951 Passenger-associated-transport-repeat 456 485 5.7E-8 T 26-04-2016 IPR013425 Autotransporter-associated beta strand repeat PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 SMART SM00869 719 985 5.4E-53 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 Pfam PF03797 Autotransporter beta-domain 718 985 1.2E-57 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 SUPERFAMILY SSF103515 681 995 6.41E-67 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 Gene3D G3DSA:3.40.50.200 46 369 1.6E-60 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 PANTHER PTHR10795 44 367 3.1E-28 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related PAM18_RS07470 cbd257bb70409a39dc3cc201d5e00a70 995 Gene3D G3DSA:2.40.128.130 691 995 4.7E-67 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 PANTHER PTHR11662:SF270 15 454 1.8E-235 T 26-04-2016 PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 Pfam PF07690 Major Facilitator Superfamily 21 381 2.1E-45 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 232 422 8.3E-16 T 26-04-2016 PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 PANTHER PTHR11662 15 454 1.8E-235 T 26-04-2016 PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 15 212 3.5E-33 T 26-04-2016 PAM18_RS24275 9e91c467c2e1334779d8898da4209666 457 SUPERFAMILY SSF103473 9 436 6.15E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 PANTHER PTHR33121 186 587 9.5E-211 T 26-04-2016 PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SMART SM00267 152 324 9.4E-4 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Gene3D G3DSA:3.30.450.40 27 163 4.2E-11 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Gene3D G3DSA:3.30.70.270 168 318 7.5E-10 T 26-04-2016 PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SMART SM00065 26 169 0.0024 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 PANTHER PTHR33121:SF13 186 587 9.5E-211 T 26-04-2016 PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Pfam PF00563 EAL domain 341 575 3.1E-69 T 26-04-2016 IPR001633 EAL domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SMART SM00052 334 580 1.5E-96 T 26-04-2016 IPR001633 EAL domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SUPERFAMILY SSF141868 349 586 2.22E-80 T 26-04-2016 IPR001633 EAL domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SUPERFAMILY SSF55073 172 308 4.79E-9 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Pfam PF01590 GAF domain 28 157 1.4E-7 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 SUPERFAMILY SSF55781 28 164 5.1E-24 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 293 7.2E-6 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS12730 29671b04b07a7d4bc22c8bce87b90e69 587 Gene3D G3DSA:3.20.20.450 339 586 1.0E-87 T 26-04-2016 IPR001633 EAL domain PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 434 40.731 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 433 1.0E-160 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 Gene3D G3DSA:3.40.50.1980 33 246 2.4E-80 T 26-04-2016 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 SUPERFAMILY SSF53720 33 434 2.35E-86 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PIRSF PIRSF000099 8 436 8.6E-159 T 26-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 236 268 - T 26-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 Pfam PF00815 Histidinol dehydrogenase 30 433 1.5E-168 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 258 277 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 236 257 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 177 203 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 207 232 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 143 169 2.7E-88 T 26-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 PAM18_RS23190 3913815ea0d82374a1dbb220ad719f22 440 PANTHER PTHR21256 6 440 1.3E-207 T 26-04-2016 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 SUPERFAMILY SSF55785 69 128 3.05E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 Gene3D G3DSA:1.10.260.40 9 68 2.3E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 SUPERFAMILY SSF47413 9 66 5.63E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 Pfam PF13560 Helix-turn-helix domain 10 67 3.1E-8 T 26-04-2016 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 Gene3D G3DSA:3.30.450.20 69 126 1.3E-4 T 26-04-2016 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 PANTHER PTHR10245 1 125 7.0E-38 T 26-04-2016 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 PANTHER PTHR10245:SF51 1 125 7.0E-38 T 26-04-2016 PAM18_RS16205 f78103f1661d20f171982ab9c0141716 184 SMART SM00530 13 68 2.4E-5 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF52540 3 304 1.74E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF81271 282 363 5.01E-38 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-32 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-32 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-32 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-32 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:1.10.150.300 131 202 2.3E-26 T 26-04-2016 IPR023192 TGS-like domain PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.2E-41 T 26-04-2016 IPR013029 Domain of unknown function DUF933 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 45.261 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 5.2E-162 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF01926 50S ribosome-binding GTPase 5 120 9.2E-22 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PANTHER PTHR23305 1 366 2.2E-212 T 26-04-2016 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.10.20.30 268 366 1.8E-51 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.40.50.300 203 267 2.3E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.40.50.300 4 130 2.3E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PANTHER PTHR23305:SF12 1 366 2.2E-212 T 26-04-2016 PAM18_RS24375 1f09514349a2e4a5af6a81dccb56358b 366 PIRSF PIRSF006641 1 366 1.1E-159 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 3.1E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 SUPERFAMILY SSF51905 2 167 1.07E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 SUPERFAMILY SSF51905 208 331 1.07E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 Gene3D G3DSA:3.50.50.60 1 109 9.7E-13 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PANTHER PTHR22912:SF180 2 369 3.9E-21 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 6.7E-9 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 6.7E-9 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.7E-9 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PANTHER PTHR22912 2 369 3.9E-21 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 3.7E-5 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-5 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 3.7E-5 T 26-04-2016 PAM18_RS11725 c164e52003e456a495cc49852bbaebf2 401 Gene3D G3DSA:3.50.50.60 110 323 9.0E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 PANTHER PTHR11061 1 363 6.8E-203 T 26-04-2016 PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 PANTHER PTHR11061:SF25 1 363 6.8E-203 T 26-04-2016 PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 SUPERFAMILY SSF53335 10 362 1.28E-57 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 Gene3D G3DSA:3.40.50.150 156 362 4.7E-46 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 363 41.293 T 26-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 296 325 - T 26-04-2016 IPR030390 RNA methyltransferase TrmA, active site PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 363 6.4E-178 T 26-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 345 355 - T 26-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site PAM18_RS24715 2050b8b45245df40236d6efa7fde2f37 363 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 363 6.4E-177 T 26-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 Gene3D G3DSA:1.10.10.10 7 66 5.1E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 Pfam PF13280 WYL domain 142 310 1.2E-32 T 26-04-2016 IPR026881 WYL domain PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 PANTHER PTHR30363:SF20 1 304 9.9E-56 T 26-04-2016 PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 SUPERFAMILY SSF46785 7 64 1.22E-9 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 Pfam PF08279 HTH domain 7 62 9.1E-16 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 PAM18_RS18750 a01e9cdaa426223722438b1bba5a9dc3 323 PANTHER PTHR30363 1 304 9.9E-56 T 26-04-2016 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 PANTHER PTHR21012 2 126 3.0E-64 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 Gene3D G3DSA:2.40.40.20 1 124 3.3E-50 T 26-04-2016 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.9E-47 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.6E-45 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 SUPERFAMILY SSF50692 1 120 2.49E-46 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 PIRSF PIRSF006246 1 125 6.2E-50 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-66 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 PANTHER PTHR21012:SF0 2 126 3.0E-64 T 26-04-2016 PAM18_RS24775 e6315abd66cc3c595038a661e21e1a04 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.559 T 26-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 83.898 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF54631 94 202 7.07E-26 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 148 200 1.4E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 95 139 3.4E-10 T 26-04-2016 IPR000644 CBS domain PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 PANTHER PTHR11911 1 281 1.1E-249 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 PANTHER PTHR11911 299 487 1.1E-249 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SMART SM01240 7 475 0.0 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 9.5E-191 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 Gene3D G3DSA:3.20.20.70 2 487 1.6E-197 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 PIRSF PIRSF000130 1 489 2.2E-203 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 26-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF51412 216 479 3.53E-127 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF51412 2 90 3.53E-127 T 26-04-2016 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 PANTHER PTHR11911:SF6 1 281 1.1E-249 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 PANTHER PTHR11911:SF6 299 487 1.1E-249 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 157 205 6.7E-4 T 26-04-2016 IPR000644 CBS domain PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 96 143 7.1E-11 T 26-04-2016 IPR000644 CBS domain PAM18_RS05930 9a682aef3e301f9476152cddaa253426 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 1.6E-164 T 26-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 SUPERFAMILY SSF53335 28 266 1.19E-26 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:1.10.150.290 199 254 1.6E-22 T 26-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Pfam PF13649 Methyltransferase domain 47 136 2.2E-10 T 26-04-2016 PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 PANTHER PTHR10108:SF808 16 255 2.2E-40 T 26-04-2016 PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:3.40.50.150 16 182 3.0E-24 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 14 274 45.299 T 26-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PAM18_RS12750 41cfd6ad7948b94dc2aca7ab5ff1d681 275 PANTHER PTHR10108 16 255 2.2E-40 T 26-04-2016 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 389 5.7E-180 T 26-04-2016 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SMART SM00382 52 253 3.5E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Pfam PF00005 ABC transporter 46 195 8.7E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Gene3D G3DSA:3.40.50.300 37 268 2.9E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 PANTHER PTHR24220:SF374 29 314 2.3E-176 T 26-04-2016 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 PANTHER PTHR24220 29 314 2.3E-176 T 26-04-2016 PAM18_RS28100 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SUPERFAMILY SSF52540 34 274 8.69E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20965 60507205f09995f904939f536e07f3da 299 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 1.3E-124 T 26-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 SUPERFAMILY SSF53686 5 294 2.23E-90 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS20965 60507205f09995f904939f536e07f3da 299 PANTHER PTHR10314 1 297 1.4E-194 T 26-04-2016 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 PANTHER PTHR10314:SF100 1 297 1.4E-194 T 26-04-2016 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 Gene3D G3DSA:3.40.50.1100 150 297 2.1E-82 T 26-04-2016 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 Gene3D G3DSA:3.40.50.1100 4 43 2.1E-82 T 26-04-2016 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 Gene3D G3DSA:3.40.50.1100 44 144 2.8E-37 T 26-04-2016 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 8.5E-171 T 26-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 26-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PAM18_RS20965 60507205f09995f904939f536e07f3da 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 4.4E-69 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS14635 d8346bce1fc293f556506814821b3743 141 Pfam PF04120 Low affinity iron permease 3 127 7.9E-51 T 26-04-2016 IPR007251 Low affinity iron permease, Fet4 GO:0055085 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 Pfam PF13533 Biotin-lipoyl like 48 90 6.0E-8 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 Pfam PF13437 HlyD family secretion protein 209 320 1.3E-13 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 SUPERFAMILY SSF111369 50 130 4.45E-8 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 PANTHER PTHR32347 19 328 1.3E-58 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 SUPERFAMILY SSF111369 147 328 6.15E-10 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 Gene3D G3DSA:2.40.50.100 43 76 1.8E-11 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 Gene3D G3DSA:2.40.50.100 206 237 1.8E-11 T 26-04-2016 PAM18_RS12295 9f9757d476c31c3ca56fb9acce0a0433 336 PANTHER PTHR32347:SF12 19 328 1.3E-58 T 26-04-2016 PAM18_RS21055 b1c83badb9e4fa5d1c71353ce7d51094 153 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.4E-20 T 26-04-2016 IPR009921 Domain of unknown function DUF1456 PAM18_RS21055 b1c83badb9e4fa5d1c71353ce7d51094 153 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 6.2E-25 T 26-04-2016 IPR009921 Domain of unknown function DUF1456 PAM18_RS21055 b1c83badb9e4fa5d1c71353ce7d51094 153 PANTHER PTHR37805:SF1 1 153 5.5E-83 T 26-04-2016 PAM18_RS21055 b1c83badb9e4fa5d1c71353ce7d51094 153 PANTHER PTHR37805 1 153 5.5E-83 T 26-04-2016 PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 SUPERFAMILY SSF88713 4 303 4.94E-101 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 Gene3D G3DSA:3.20.20.370 4 304 1.6E-121 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 302 1.2E-165 T 26-04-2016 IPR017625 Putative urate catabolism protein PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 Pfam PF01522 Polysaccharide deacetylase 76 164 2.8E-17 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 PANTHER PTHR10587:SF72 10 301 8.6E-181 T 26-04-2016 PAM18_RS18500 bf35648c147c8df4a1b8b6284f16b02c 308 PANTHER PTHR10587 10 301 8.6E-181 T 26-04-2016 PAM18_RS23150 6739ef62a4930f0861cb19427ef81643 209 PANTHER PTHR12277:SF79 17 203 4.0E-90 T 26-04-2016 PAM18_RS23150 6739ef62a4930f0861cb19427ef81643 209 Gene3D G3DSA:3.40.50.1820 9 205 2.2E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS23150 6739ef62a4930f0861cb19427ef81643 209 SUPERFAMILY SSF53474 7 203 1.21E-38 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS23150 6739ef62a4930f0861cb19427ef81643 209 PANTHER PTHR12277 17 203 4.0E-90 T 26-04-2016 PAM18_RS23150 6739ef62a4930f0861cb19427ef81643 209 Pfam PF00975 Thioesterase domain 88 139 2.5E-9 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 Pfam PF00083 Sugar (and other) transporter 39 158 9.4E-8 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 Pfam PF07690 Major Facilitator Superfamily 206 386 1.4E-18 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 Gene3D G3DSA:1.20.1250.20 9 177 2.2E-10 T 26-04-2016 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 PANTHER PTHR23521:SF2 3 416 3.3E-200 T 26-04-2016 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 PANTHER PTHR23521 3 416 3.3E-200 T 26-04-2016 PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 SUPERFAMILY SSF103473 8 372 1.57E-41 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS25580 2da358b2c1f869800ac49bd23603da30 438 Gene3D G3DSA:1.20.1250.20 195 383 7.3E-22 T 26-04-2016 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 Pfam PF00083 Sugar (and other) transporter 16 211 2.2E-20 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 Gene3D G3DSA:1.20.1250.20 232 419 8.2E-24 T 26-04-2016 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 Gene3D G3DSA:1.20.1250.20 11 212 2.7E-23 T 26-04-2016 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 PANTHER PTHR23508:SF11 6 439 0.0 T 26-04-2016 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 PANTHER PTHR23508 6 439 0.0 T 26-04-2016 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 Pfam PF07690 Major Facilitator Superfamily 245 430 2.4E-11 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS22655 393c14a3f25d2adccdd9244b4e93e36b 439 SUPERFAMILY SSF103473 11 419 1.05E-65 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 PIRSF PIRSF002808 5 447 2.7E-174 T 26-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 Gene3D G3DSA:1.20.1250.20 23 224 4.3E-52 T 26-04-2016 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 PANTHER PTHR11662:SF141 1 437 1.3E-240 T 26-04-2016 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 PANTHER PTHR11662 1 437 1.3E-240 T 26-04-2016 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 435 2.7E-240 T 26-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.9E-154 T 26-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 26-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 SUPERFAMILY SSF103473 10 439 6.67E-87 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 Gene3D G3DSA:1.20.1250.20 246 438 2.1E-46 T 26-04-2016 PAM18_RS27365 f19905e5146a69efea1214c578b26415 448 Pfam PF07690 Major Facilitator Superfamily 34 400 2.2E-53 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 PIRSF PIRSF000090 1 249 5.8E-83 T 26-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 SMART SM00893 23 211 7.4E-68 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 Gene3D G3DSA:3.40.50.620 1 247 1.6E-103 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 3.5E-46 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 26-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 PANTHER PTHR21294 1 249 4.7E-152 T 26-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 PANTHER PTHR21294:SF8 1 249 4.7E-152 T 26-04-2016 PAM18_RS10315 662cb72a79f033873daccf8bc8836398 249 SUPERFAMILY SSF52402 1 244 6.42E-85 T 26-04-2016 PAM18_RS01045 4067ed863117bf27af9065a1dbef95ce 268 SUPERFAMILY SSF52096 26 244 1.99E-18 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS01045 4067ed863117bf27af9065a1dbef95ce 268 Gene3D G3DSA:3.90.226.10 35 190 7.4E-13 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS01045 4067ed863117bf27af9065a1dbef95ce 268 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 9 268 2.1E-99 T 26-04-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 PAM18_RS01045 4067ed863117bf27af9065a1dbef95ce 268 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 268 6.6E-101 T 26-04-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 PANTHER PTHR10094:SF16 18 142 1.2E-56 T 26-04-2016 PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 Gene3D G3DSA:3.30.1050.10 76 134 3.2E-10 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 SUPERFAMILY SSF55718 42 135 3.06E-17 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 PIRSF PIRSF025550 1 171 1.8E-68 T 26-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 PANTHER PTHR10094 18 142 1.2E-56 T 26-04-2016 PAM18_RS05225 d74b6dfc87ccd86873a03d9d402137c2 171 Pfam PF02036 SCP-2 sterol transfer family 38 131 1.1E-14 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 5.7E-103 T 26-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 SUPERFAMILY SSF52172 1 175 1.36E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 SMART SM00448 1 112 8.3E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 PANTHER PTHR26402 1 226 1.4E-106 T 26-04-2016 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 Gene3D G3DSA:3.40.50.2300 1 122 2.0E-38 T 26-04-2016 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.1E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 Gene3D G3DSA:1.10.10.10 123 223 5.2E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 PANTHER PTHR26402:SF575 1 226 1.4E-106 T 26-04-2016 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 SMART SM00862 146 221 2.4E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11055 f20a3afdb13caf86854e110b32fab366 226 Pfam PF00072 Response regulator receiver domain 4 112 3.5E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS14400 add71e19fda317a4d8457e6dc6b95397 442 PANTHER PTHR12631 1 403 4.4E-106 T 26-04-2016 PAM18_RS14400 add71e19fda317a4d8457e6dc6b95397 442 SUPERFAMILY SSF51445 43 358 3.1E-62 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14400 add71e19fda317a4d8457e6dc6b95397 442 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 48 285 1.2E-5 T 26-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 PAM18_RS14400 add71e19fda317a4d8457e6dc6b95397 442 Gene3D G3DSA:3.20.20.80 42 355 1.1E-56 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14400 add71e19fda317a4d8457e6dc6b95397 442 PANTHER PTHR12631:SF4 1 403 4.4E-106 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 804 878 1.1E-12 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SUPERFAMILY SSF52540 190 519 5.28E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Gene3D G3DSA:1.10.8.60 376 458 2.6E-28 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PANTHER PTHR11638:SF122 1 146 0.0 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PANTHER PTHR11638:SF122 172 900 0.0 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SUPERFAMILY SSF81923 12 133 1.41E-17 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Gene3D G3DSA:3.40.50.300 590 814 2.5E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Gene3D G3DSA:3.40.50.300 190 373 4.1E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SMART SM01086 804 896 5.4E-11 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SMART SM00382 632 775 2.5E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SMART SM00382 229 370 4.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 4.6E-30 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 728 4.6E-30 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 743 757 4.6E-30 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 4.6E-30 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 325 337 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Gene3D G3DSA:1.10.1780.10 10 142 4.6E-18 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PANTHER PTHR11638 1 146 0.0 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 PANTHER PTHR11638 172 900 0.0 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Pfam PF07724 AAA domain (Cdc48 subfamily) 631 797 3.3E-38 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 234 367 5.3E-9 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 Gene3D G3DSA:1.10.8.60 815 895 4.5E-9 T 26-04-2016 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 888 0.0 T 26-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PAM18_RS00460 19ab2ca4bbcb446fad747506324942c8 902 SUPERFAMILY SSF52540 581 878 3.95E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 SUPERFAMILY SSF53807 25 304 7.85E-69 T 26-04-2016 PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 298 1.2E-51 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 Gene3D G3DSA:3.40.50.1980 196 305 7.9E-22 T 26-04-2016 PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 Gene3D G3DSA:3.40.50.1980 17 194 9.1E-42 T 26-04-2016 PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 PANTHER PTHR30477:SF1 12 289 2.3E-80 T 26-04-2016 PAM18_RS28720 3512595aa0379fc87a64bf7768d54476 307 PANTHER PTHR30477 12 289 2.3E-80 T 26-04-2016 PAM18_RS05680 5cf413743d303a07265d1615f1b2f460 182 Pfam PF05433 Glycine zipper 2TM domain 72 113 2.6E-10 T 26-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 PAM18_RS05680 5cf413743d303a07265d1615f1b2f460 182 PANTHER PTHR35603:SF2 2 180 5.9E-94 T 26-04-2016 PAM18_RS05680 5cf413743d303a07265d1615f1b2f460 182 PANTHER PTHR35603 2 180 5.9E-94 T 26-04-2016 PAM18_RS04175 f503250af4b3158fcc6a467cc0fd8eb2 267 Gene3D G3DSA:3.30.200.20 7 96 5.6E-31 T 26-04-2016 PAM18_RS04175 f503250af4b3158fcc6a467cc0fd8eb2 267 Gene3D G3DSA:3.90.1200.10 97 172 9.5E-13 T 26-04-2016 PAM18_RS04175 f503250af4b3158fcc6a467cc0fd8eb2 267 SUPERFAMILY SSF56112 14 170 2.04E-29 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS04175 f503250af4b3158fcc6a467cc0fd8eb2 267 Pfam PF01636 Phosphotransferase enzyme family 29 164 8.1E-19 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 Pfam PF00293 NUDIX domain 47 156 3.0E-16 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 Gene3D G3DSA:3.90.79.10 13 177 6.7E-51 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 SUPERFAMILY SSF55811 19 177 1.21E-34 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 PANTHER PTHR22769 18 175 2.0E-29 T 26-04-2016 PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 PIRSF PIRSF017340 10 178 4.0E-77 T 26-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 PAM18_RS25350 2eac24a92ca41adcd33518a15e95d470 178 PANTHER PTHR22769:SF25 18 175 2.0E-29 T 26-04-2016 PAM18_RS19200 796eb52cc579bdd5db4a6f1f798110b9 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 108.193 T 26-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PAM18_RS19200 796eb52cc579bdd5db4a6f1f798110b9 312 PANTHER PTHR34308:SF1 1 309 6.9E-106 T 26-04-2016 PAM18_RS19200 796eb52cc579bdd5db4a6f1f798110b9 312 Pfam PF03186 CobD/Cbib protein 7 290 1.0E-95 T 26-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PAM18_RS19200 796eb52cc579bdd5db4a6f1f798110b9 312 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 305 3.6E-58 T 26-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 PAM18_RS19200 796eb52cc579bdd5db4a6f1f798110b9 312 PANTHER PTHR34308 1 309 6.9E-106 T 26-04-2016 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Pfam PF00563 EAL domain 704 937 7.5E-73 T 26-04-2016 IPR001633 EAL domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 PANTHER PTHR33121 651 951 5.5E-74 T 26-04-2016 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SUPERFAMILY SSF55785 392 512 4.54E-24 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00086 350 393 1.0E-6 T 26-04-2016 IPR001610 PAC motif PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00086 473 515 0.0021 T 26-04-2016 IPR001610 PAC motif PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Pfam PF00990 Diguanylate cyclase, GGDEF domain 527 682 2.2E-41 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Gene3D G3DSA:3.20.20.450 700 949 3.0E-100 T 26-04-2016 IPR001633 EAL domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SUPERFAMILY SSF55785 320 395 2.09E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Gene3D G3DSA:3.30.70.270 528 694 1.4E-51 T 26-04-2016 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Pfam PF13426 PAS domain 412 513 4.7E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 324 399 5.4E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 522 6.5E-20 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Pfam PF08447 PAS fold 317 386 3.3E-17 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 527 685 8.0E-33 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00091 277 343 23.0 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00091 401 467 2.6E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00267 515 687 3.6E-52 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SMART SM00052 697 942 8.0E-119 T 26-04-2016 IPR001633 EAL domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Gene3D G3DSA:3.30.450.20 397 509 8.5E-26 T 26-04-2016 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SUPERFAMILY SSF141868 702 949 1.96E-91 T 26-04-2016 IPR001633 EAL domain PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 SUPERFAMILY SSF55073 531 689 1.33E-42 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 PANTHER PTHR33121:SF13 651 951 5.5E-74 T 26-04-2016 PAM18_RS28440 2270659fa4b1843bd634de8a68dd3253 951 Gene3D G3DSA:3.30.450.20 267 396 2.0E-25 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 SUPERFAMILY SSF46785 12 122 1.75E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 Gene3D G3DSA:3.40.190.10 100 195 2.4E-20 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 PANTHER PTHR30419:SF7 8 328 3.7E-159 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 PANTHER PTHR30419 8 328 3.7E-159 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 SUPERFAMILY SSF53850 100 311 3.08E-31 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 5.5E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 Gene3D G3DSA:3.40.190.10 196 274 3.7E-6 T 26-04-2016 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 5.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 5.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 5.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 Pfam PF03466 LysR substrate binding domain 99 306 3.9E-31 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10475 8aaf4a727214872d18093403c48433e5 329 Gene3D G3DSA:1.10.10.10 14 99 2.0E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22110 2e8de11682bb7cb175179ce76577bb1a 259 Gene3D G3DSA:3.20.20.450 90 251 6.1E-4 T 26-04-2016 IPR001633 EAL domain PAM18_RS22110 2e8de11682bb7cb175179ce76577bb1a 259 Pfam PF00563 EAL domain 22 248 8.5E-11 T 26-04-2016 IPR001633 EAL domain PAM18_RS22110 2e8de11682bb7cb175179ce76577bb1a 259 SUPERFAMILY SSF141868 21 252 1.57E-6 T 26-04-2016 IPR001633 EAL domain PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 SUPERFAMILY SSF46785 6 86 2.64E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.7E-12 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 PANTHER PTHR11751 85 458 1.1E-208 T 26-04-2016 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 Gene3D G3DSA:3.40.640.10 135 355 4.5E-71 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 SMART SM00345 17 76 1.3E-12 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 Pfam PF00155 Aminotransferase class I and II 107 446 8.4E-39 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 Gene3D G3DSA:3.90.1150.10 356 446 2.3E-7 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 PANTHER PTHR11751:SF386 85 458 1.1E-208 T 26-04-2016 PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 SUPERFAMILY SSF53383 105 457 3.85E-86 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27610 34bbf2112673dda4da1d5fffa7ea8672 458 Gene3D G3DSA:1.10.10.10 4 78 1.1E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 PANTHER PTHR10744 9 87 4.7E-43 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 Gene3D G3DSA:2.40.50.140 9 85 1.1E-35 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 Pfam PF00366 Ribosomal protein S17 13 79 1.0E-33 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 SUPERFAMILY SSF50249 9 85 3.47E-33 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 1.7E-37 T 26-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 26.494 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 2.1E-13 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 2.1E-13 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 2.1E-13 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03470 808061b58de0b6b1035bd0d56932bf94 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-35 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 PANTHER PTHR11699:SF115 1 490 0.0 T 26-04-2016 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 1.4E-181 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 SUPERFAMILY SSF53720 5 483 3.4E-178 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 PANTHER PTHR11699 1 490 0.0 T 26-04-2016 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 Gene3D G3DSA:3.40.309.10 266 444 4.7E-70 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 Gene3D G3DSA:3.40.605.10 6 265 7.6E-108 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.6E-228 T 26-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS28085 8b0c09e3a970484c15fc4e0df468fc7c 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 59.236 T 26-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 3 91 2.8E-39 T 26-04-2016 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.382 T 26-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 3.8E-65 T 26-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 PANTHER PTHR23133:SF2 1 197 3.9E-106 T 26-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 4 88 3.67E-34 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 89 181 3.49E-35 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 26-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 92 197 4.4E-31 T 26-04-2016 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 26-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 PAM18_RS26885 34ea8fd09ec03b88f1e03687cdce9cea 197 PANTHER PTHR23133 1 197 3.9E-106 T 26-04-2016 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 PANTHER PTHR10578:SF76 1 381 3.8E-264 T 26-04-2016 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 Pfam PF01070 FMN-dependent dehydrogenase 14 376 5.1E-136 T 26-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 SUPERFAMILY SSF51395 4 376 1.22E-104 T 26-04-2016 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 PIRSF PIRSF000138 1 380 2.6E-128 T 26-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 26-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 Gene3D G3DSA:3.20.20.70 4 376 5.3E-141 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS13675 1d059b608c7cb02db9c30e3c500e3543 383 PANTHER PTHR10578 1 381 3.8E-264 T 26-04-2016 PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-15 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 Pfam PF01809 Haemolytic domain 4 68 5.5E-31 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 PANTHER PTHR33383 1 75 2.0E-45 T 26-04-2016 PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.888 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 SMART SM01234 1 68 3.1E-48 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor PAM18_RS15380 6dc069c6f12a27070bc121692eef751e 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 74 2.5E-30 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00052 858 1105 1.3E-77 T 26-04-2016 IPR001633 EAL domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00091 300 366 7.2E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00091 555 624 1.1E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00091 427 495 5.2 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 421 1.2E-25 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 552 681 8.2E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SUPERFAMILY SSF55785 307 418 7.57E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 PANTHER PTHR24423:SF477 29 560 4.3E-59 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 PANTHER PTHR24423:SF477 1052 1067 4.3E-59 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF08448 PAS fold 563 675 1.1E-11 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Gene3D G3DSA:3.30.450.20 550 672 1.1E-17 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF00990 Diguanylate cyclase, GGDEF domain 685 842 8.3E-43 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Gene3D G3DSA:3.30.450.20 290 413 9.5E-23 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF00563 EAL domain 866 1100 2.3E-64 T 26-04-2016 IPR001633 EAL domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SUPERFAMILY SSF55785 539 668 1.92E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SUPERFAMILY SSF55785 435 544 1.31E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SUPERFAMILY SSF141868 865 1112 1.44E-74 T 26-04-2016 IPR001633 EAL domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SUPERFAMILY SSF55073 690 846 3.14E-47 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00086 373 415 1.7E-7 T 26-04-2016 IPR001610 PAC motif PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00086 501 543 2.3E-8 T 26-04-2016 IPR001610 PAC motif PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00086 632 674 120.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF05231 MASE1 16 289 1.4E-17 T 26-04-2016 IPR007895 MASE1 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 683 845 6.0E-42 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Gene3D G3DSA:3.30.70.270 687 847 8.4E-54 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF08447 PAS fold 324 406 6.7E-11 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Pfam PF08447 PAS fold 450 537 3.9E-17 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Gene3D G3DSA:3.30.450.20 417 541 1.8E-22 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 PANTHER PTHR24423 29 560 4.3E-59 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 PANTHER PTHR24423 1052 1067 4.3E-59 T 26-04-2016 PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 SMART SM00267 674 846 1.3E-58 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19685 6fcd89633b95aaccf184ab62b48d58bd 1120 Gene3D G3DSA:3.20.20.450 862 1112 8.9E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 Pfam PF02525 Flavodoxin-like fold 3 207 4.8E-44 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 209 29.269 T 26-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 Gene3D G3DSA:3.40.50.360 1 210 3.8E-58 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 PANTHER PTHR10204:SF16 1 212 4.9E-111 T 26-04-2016 PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 SUPERFAMILY SSF52218 1 210 1.71E-48 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS21715 2ba2898f2dfac25419de32fc6048cf35 212 PANTHER PTHR10204 1 212 4.9E-111 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.1E-17 T 26-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:2.20.25.90 52 98 2.6E-32 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615 700 839 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615 34 414 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615 855 882 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615 1001 1235 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:4.10.1200.10 1 25 4.6E-11 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Pfam PF01568 Molydopterin dinucleotide binding domain 1094 1208 1.3E-22 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1131 1158 - T 26-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 SUPERFAMILY SSF53706 4 1076 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 780 797 - T 26-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Pfam PF00384 Molybdopterin oxidoreductase 108 836 1.0E-163 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 26-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.40.50.740 596 782 2.5E-58 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 SMART SM00926 43 105 5.5E-8 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.40.50.740 108 117 1.9E-5 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.40.50.740 149 204 1.9E-5 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615:SF165 700 839 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615:SF165 34 414 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615:SF165 855 882 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 PANTHER PTHR11615:SF165 1001 1235 0.0 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:2.40.40.20 1061 1240 3.3E-44 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 SUPERFAMILY SSF50692 1085 1241 4.07E-48 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1241 0.0 T 26-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.40.228.10 491 595 3.0E-77 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.40.228.10 218 336 3.0E-77 T 26-04-2016 PAM18_RS05415 ecb8e457f24929302d32128fdb5de07c 1261 Gene3D G3DSA:3.90.55.10 783 837 7.6E-7 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF81301 207 420 2.62E-63 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF02824 TGS domain 416 475 3.8E-22 T 26-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.30.70.260 667 742 4.8E-18 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 PANTHER PTHR21262 69 746 0.0 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF13291 ACT domain 666 743 4.1E-19 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF109604 18 218 1.79E-49 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SMART SM00954 262 372 3.9E-66 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF81271 407 475 5.01E-22 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 PANTHER PTHR21262:SF5 69 746 0.0 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.10.20.30 416 477 2.5E-25 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Gene3D G3DSA:3.30.460.10 205 351 1.1E-53 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF13328 HD domain 40 202 6.1E-46 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 69 742 1.6E-189 T 26-04-2016 IPR004811 RelA/SpoT family GO:0015969 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 SUPERFAMILY SSF55021 667 743 5.0E-15 T 26-04-2016 PAM18_RS20955 9cd9a3d0c8e8eafb8d87e88172a2c980 747 Pfam PF04607 Region found in RelA / SpoT proteins 262 370 5.2E-38 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 SUPERFAMILY SSF54593 8 344 3.29E-80 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 Gene3D G3DSA:3.10.180.10 162 357 3.4E-71 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 277 2.0E-16 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 PANTHER PTHR11959:SF1 1 356 1.3E-140 T 26-04-2016 PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 PIRSF PIRSF009283 1 357 8.5E-121 T 26-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 10 149 1.8E-51 T 26-04-2016 PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 Gene3D G3DSA:3.10.180.10 9 153 2.4E-41 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 17 356 2.3E-124 T 26-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PAM18_RS21320 66d5b970838557475bccf0afe5d2a000 357 PANTHER PTHR11959 1 356 1.3E-140 T 26-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615:SF134 541 686 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615:SF134 361 427 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615:SF134 733 902 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615:SF134 458 507 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615:SF134 3 317 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 4.2E-12 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 26-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:3.30.70.20 198 226 5.3E-5 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:3.30.70.20 147 157 5.3E-5 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:3.10.20.30 3 84 9.0E-9 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SUPERFAMILY SSF54292 1 77 7.88E-19 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SUPERFAMILY SSF53706 219 685 4.19E-86 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 6.6E-15 T 26-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 3.1E-10 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 26-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 652 9.9E-214 T 26-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Pfam PF00384 Molybdopterin oxidoreductase 550 635 1.0E-10 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 26-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615 541 686 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615 361 427 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615 733 902 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615 458 507 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 PANTHER PTHR11615 3 317 0.0 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SUPERFAMILY SSF50692 812 889 9.27E-8 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:2.20.25.90 227 275 1.4E-14 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SMART SM00929 88 128 2.6E-19 T 26-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:3.40.50.740 290 337 4.6E-36 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:3.40.50.740 501 683 4.6E-36 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SUPERFAMILY SSF54862 81 213 1.17E-33 T 26-04-2016 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 SMART SM00926 221 275 1.4E-11 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS11985 af1c377035ad52e2d06d33b3510996f4 905 Gene3D G3DSA:2.40.40.20 816 886 1.4E-4 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF55785 547 673 1.12E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF08447 PAS fold 336 408 1.8E-10 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799:SF774 539 682 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799:SF774 1174 1193 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799:SF774 841 1059 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.40.190.10 116 216 1.1E-12 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF55785 688 795 5.24E-29 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF13426 PAS domain 572 674 6.0E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF13426 PAS domain 694 795 1.9E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF13426 PAS domain 448 548 2.5E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF55073 813 970 4.79E-54 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00062 38 258 1.2E-31 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF00990 Diguanylate cyclase, GGDEF domain 808 965 6.5E-54 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF141868 984 1231 1.7E-89 T 26-04-2016 IPR001633 EAL domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF55785 297 424 8.38E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00086 510 550 3.5 T 26-04-2016 IPR001610 PAC motif PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00086 635 675 51.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00086 386 426 1.0E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00086 755 797 5.5E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.30.70.270 809 973 1.0E-62 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 560 682 2.9E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 687 804 5.5E-20 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 556 5.7E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 432 3.0E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00267 797 969 2.1E-71 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799 539 682 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799 1174 1193 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 PANTHER PTHR10799 841 1059 7.1E-95 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF00563 EAL domain 986 1220 6.8E-77 T 26-04-2016 IPR001633 EAL domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.30.450.20 295 430 6.9E-24 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF53850 39 256 1.23E-49 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.30.450.20 673 791 4.4E-31 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SUPERFAMILY SSF55785 423 548 2.44E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 5.1E-36 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00052 979 1225 1.3E-123 T 26-04-2016 IPR001633 EAL domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 968 1.6E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.30.450.20 431 547 3.8E-20 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.30.450.20 548 672 8.7E-20 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.40.190.10 218 256 3.3E-23 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.40.190.10 36 115 3.3E-23 T 26-04-2016 PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 Gene3D G3DSA:3.20.20.450 982 1227 1.3E-100 T 26-04-2016 IPR001633 EAL domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00091 683 749 6.9E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00091 312 380 0.0026 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00091 438 505 3.2E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS02915 75884e9faf2e94eb09533fa3c3ecaedb 1245 SMART SM00091 562 629 1.1E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 Gene3D G3DSA:2.140.10.20 270 559 8.3E-150 T 26-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 SUPERFAMILY SSF46626 18 159 8.6E-21 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 Gene3D G3DSA:1.10.760.10 39 139 1.3E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 SUPERFAMILY SSF51004 143 568 1.57E-128 T 26-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 134 6.6E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 Gene3D G3DSA:2.130.10.10 178 252 9.6E-6 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS02625 d017dae48d8f132782e9b07691f99cb8 568 Pfam PF02239 Cytochrome D1 heme domain 171 563 4.2E-167 T 26-04-2016 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 SUPERFAMILY SSF46894 136 236 3.4E-25 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 5.5E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 Pfam PF00072 Response regulator receiver domain 5 118 4.7E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 Gene3D G3DSA:1.10.10.10 147 237 9.0E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 SMART SM00862 160 235 2.1E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 SUPERFAMILY SSF52172 3 130 1.71E-36 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 SMART SM00448 3 118 4.7E-38 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26075 ecd63bc23867525d2aa5524941626edf 242 Gene3D G3DSA:3.40.50.2300 3 146 3.6E-37 T 26-04-2016 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Gene3D G3DSA:2.170.190.11 56 135 1.1E-27 T 26-04-2016 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 PANTHER PTHR10192 1 405 4.0E-224 T 26-04-2016 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Gene3D G3DSA:3.90.105.10 136 167 2.5E-21 T 26-04-2016 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 26-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 PANTHER PTHR10192:SF17 1 405 4.0E-224 T 26-04-2016 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 SUPERFAMILY SSF53218 182 325 3.66E-41 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 SUPERFAMILY SSF63882 8 181 2.88E-53 T 26-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 SUPERFAMILY SSF63867 330 402 1.44E-15 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 181 317 1.2E-31 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Gene3D G3DSA:3.40.980.10 168 333 3.0E-59 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Pfam PF00994 Probable molybdopterin binding domain 186 319 2.0E-27 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 172 3.9E-35 T 26-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 SMART SM00852 185 321 1.8E-40 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Gene3D G3DSA:2.40.340.10 334 401 7.0E-13 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS09930 8d257b0a6506eb0f3944d1585464c5a9 405 Pfam PF03454 MoeA C-terminal region (domain IV) 335 400 4.5E-15 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 360 3.8E-9 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Pfam PF08245 Mur ligase middle domain 108 291 8.2E-22 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.2E-215 T 26-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 PANTHER PTHR23135:SF17 1 440 7.1E-288 T 26-04-2016 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 SUPERFAMILY SSF53623 94 308 8.63E-53 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Pfam PF01225 Mur ligase family, catalytic domain 2 100 5.9E-19 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 PANTHER PTHR23135 1 440 7.1E-288 T 26-04-2016 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 SUPERFAMILY SSF53244 311 448 4.97E-34 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Gene3D G3DSA:3.90.190.20 313 449 2.8E-31 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Gene3D G3DSA:3.40.1190.10 92 312 6.3E-88 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 SUPERFAMILY SSF51984 1 90 1.57E-23 T 26-04-2016 PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Gene3D G3DSA:3.40.50.720 1 90 6.6E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04680 cc1ff698083beb0cb2958bd527fd2b5d 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 60.775 T 26-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 SUPERFAMILY SSF46785 4 113 3.53E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 PANTHER PTHR30537 1 293 1.1E-204 T 26-04-2016 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.8E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 PANTHER PTHR30537:SF20 1 293 1.1E-204 T 26-04-2016 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 Gene3D G3DSA:1.10.10.10 4 84 9.2E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 Gene3D G3DSA:3.40.190.10 93 178 3.9E-26 T 26-04-2016 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 SUPERFAMILY SSF53850 90 294 1.66E-43 T 26-04-2016 PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 Pfam PF03466 LysR substrate binding domain 89 293 2.4E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS16310 de9ede1c9851ec29243558f7a32597a8 295 Gene3D G3DSA:3.40.190.10 179 261 1.3E-6 T 26-04-2016 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 Gene3D G3DSA:1.10.357.10 2 187 2.5E-27 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 PANTHER PTHR30055 1 200 1.2E-54 T 26-04-2016 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 Pfam PF13972 Bacterial transcriptional repressor 56 192 2.2E-32 T 26-04-2016 IPR025722 Bacterial transcriptional repressor TetR PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 9.7E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 SUPERFAMILY SSF46689 2 65 3.75E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 PANTHER PTHR30055:SF30 1 200 1.2E-54 T 26-04-2016 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.9E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS26460 a22668cf4c3bd9516cf294cedf278c33 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.9E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 503 3.4E-14 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Pfam PF00571 CBS domain 278 323 2.4E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Pfam PF00563 EAL domain 9 239 3.4E-56 T 26-04-2016 IPR001633 EAL domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 SMART SM00052 2 244 1.1E-48 T 26-04-2016 IPR001633 EAL domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 SUPERFAMILY SSF54631 277 406 1.29E-10 T 26-04-2016 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 PANTHER PTHR33121 10 274 1.4E-59 T 26-04-2016 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 PANTHER PTHR33121:SF10 10 274 1.4E-59 T 26-04-2016 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Gene3D G3DSA:3.30.70.270 405 571 6.4E-23 T 26-04-2016 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Gene3D G3DSA:3.10.580.10 278 397 1.0E-8 T 26-04-2016 PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 SUPERFAMILY SSF141868 8 242 2.35E-67 T 26-04-2016 IPR001633 EAL domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 Gene3D G3DSA:3.20.20.450 8 251 3.0E-63 T 26-04-2016 IPR001633 EAL domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 417 491 2.2E-14 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 SMART SM00267 390 577 4.4E-7 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08790 c041a7333f5c1b60ec131e57781063f7 582 SUPERFAMILY SSF55073 407 572 1.18E-23 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 Gene3D G3DSA:3.30.450.80 9 183 6.7E-16 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 PANTHER PTHR26402 181 241 3.1E-14 T 26-04-2016 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 Gene3D G3DSA:1.10.10.10 184 239 1.3E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 2.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 2.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 2.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 SUPERFAMILY SSF46894 174 241 4.42E-19 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 Pfam PF03472 Autoinducer binding domain 20 161 1.4E-24 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 5 241 9.5E-111 T 26-04-2016 IPR019941 Transcription regulator LuxR, chaperone HchA-associated PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 SMART SM00421 178 235 3.7E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 234 1.5E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19900 32a679be046ffa18074a696aeb3eb5ab 243 SUPERFAMILY SSF75516 8 171 2.22E-16 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF46689 381 465 6.27E-21 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.5E-13 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.10.60 398 466 2.3E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.7E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.7E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.2300 6 128 3.3E-34 T 26-04-2016 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00448 5 116 5.5E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 PANTHER PTHR32071 1 476 2.6E-258 T 26-04-2016 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.300 138 312 9.0E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 463 2.4E-243 T 26-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52172 5 186 4.84E-43 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 PANTHER PTHR32071:SF15 1 476 2.6E-258 T 26-04-2016 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00382 161 304 7.8E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00158 Sigma-54 interaction domain 141 308 3.7E-71 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00072 Response regulator receiver domain 7 115 1.4E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52540 140 384 2.01E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.8.60 314 391 4.8E-23 T 26-04-2016 PAM18_RS26785 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-102 T 26-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 PANTHER PTHR23105:SF5 21 229 1.1E-75 T 26-04-2016 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 34 220 9.0E-49 T 26-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 26-04-2016 IPR023673 Ribosomal protein L1, conserved site PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 PANTHER PTHR23105 21 229 1.1E-75 T 26-04-2016 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.30.190.20 19 68 4.4E-44 T 26-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.30.190.20 161 226 4.4E-44 T 26-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.014 T 26-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 SUPERFAMILY SSF56808 6 225 6.93E-79 T 26-04-2016 IPR023674 Ribosomal protein L1-like PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.40.50.790 69 159 4.5E-38 T 26-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PAM18_RS03375 0a2ff9556c282ff99118ee66c0bdfec5 231 PIRSF PIRSF002155 1 227 4.3E-75 T 26-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 Pfam PF00515 Tetratricopeptide repeat 410 441 1.5E-8 T 26-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 Pfam PF13519 von Willebrand factor type A domain 107 203 2.8E-10 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 Gene3D G3DSA:3.40.50.410 116 232 9.9E-4 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 PANTHER PTHR22550:SF5 3 529 5.4E-159 T 26-04-2016 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 SUPERFAMILY SSF53300 102 233 1.6E-11 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 PANTHER PTHR22550 3 529 5.4E-159 T 26-04-2016 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 SUPERFAMILY SSF48452 363 477 9.95E-12 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 Gene3D G3DSA:1.25.40.10 383 461 3.3E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09710 515bbef3aee2276221f5450a488fe471 586 SMART SM00028 409 442 3.9E-7 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 TIGRFAM TIGR00492 alr: alanine racemase 3 354 8.4E-108 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 SMART SM01005 232 355 2.6E-64 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 Gene3D G3DSA:2.40.37.10 212 355 7.8E-53 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 248 263 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 265 280 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 25 41 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 338 351 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 120 132 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 286 303 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 191 218 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 60 78 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 154 165 2.2E-62 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PANTHER PTHR30511:SF0 1 354 3.0E-160 T 26-04-2016 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 PANTHER PTHR30511 1 354 3.0E-160 T 26-04-2016 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 Gene3D G3DSA:3.20.20.10 10 211 1.3E-73 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 SUPERFAMILY SSF51419 8 233 4.58E-73 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 2.2E-71 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 Hamap MF_01201 Alanine racemase. 1 355 35.157 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 26-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 1.6E-37 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27705 1da503a9f5d5a501ae39f052505c19e5 357 SUPERFAMILY SSF50621 228 355 1.43E-43 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS17060 3c7dfa5a87bc9e0723d8e92cc982d439 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 13 85 8.7E-26 T 26-04-2016 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 PAM18_RS17060 3c7dfa5a87bc9e0723d8e92cc982d439 85 SUPERFAMILY SSF140129 8 81 1.83E-21 T 26-04-2016 PAM18_RS17060 3c7dfa5a87bc9e0723d8e92cc982d439 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 13 85 4.7E-22 T 26-04-2016 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 SUPERFAMILY SSF51338 9 66 3.38E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 SUPERFAMILY SSF51338 364 438 3.38E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 PANTHER PTHR11271:SF7 1 440 1.2E-199 T 26-04-2016 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 Gene3D G3DSA:3.20.20.140 69 372 1.2E-96 T 26-04-2016 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 Pfam PF01979 Amidohydrolase family 64 412 8.6E-68 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 SUPERFAMILY SSF51556 66 365 1.04E-93 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 Gene3D G3DSA:2.30.40.10 24 68 1.1E-10 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 Gene3D G3DSA:2.30.40.10 373 413 1.1E-10 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS09235 d58b58e7493221cd8e10b539d34ad187 444 PANTHER PTHR11271 1 440 1.2E-199 T 26-04-2016 PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 PANTHER PTHR11814 6 494 0.0 T 26-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 Pfam PF01740 STAS domain 404 485 7.1E-6 T 26-04-2016 IPR002645 STAS domain PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 SUPERFAMILY SSF52091 400 485 3.73E-10 T 26-04-2016 IPR002645 STAS domain PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 Gene3D G3DSA:3.30.750.24 405 483 1.2E-4 T 26-04-2016 IPR002645 STAS domain PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 26-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 Pfam PF00916 Sulfate permease family 13 141 6.0E-28 T 26-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 Pfam PF00916 Sulfate permease family 166 346 1.7E-28 T 26-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PAM18_RS12755 6e8adb9043b822b2f2e8dda7b300f211 495 PANTHER PTHR11814:SF76 6 494 0.0 T 26-04-2016 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 PANTHER PTHR30328:SF11 3 188 5.2E-40 T 26-04-2016 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 3.6E-15 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF46689 3 80 5.13E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF48498 77 191 5.56E-36 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.1E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.1E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 PANTHER PTHR30328 3 188 5.2E-40 T 26-04-2016 PAM18_RS16435 aaf89f0d42765cf83011c9ed8a671ba2 193 Gene3D G3DSA:1.10.357.10 5 191 3.6E-35 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Gene3D G3DSA:1.20.1250.20 253 423 7.4E-17 T 26-04-2016 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Gene3D G3DSA:1.20.1250.20 47 228 9.0E-33 T 26-04-2016 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 PANTHER PTHR23501:SF11 1 426 1.2E-229 T 26-04-2016 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 SUPERFAMILY SSF103473 40 424 1.31E-67 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Pfam PF07690 Major Facilitator Superfamily 52 360 2.0E-39 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 102 118 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS26315 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 PANTHER PTHR23501 1 426 1.2E-229 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00387 876 992 1.6E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00086 418 460 0.0089 T 26-04-2016 IPR001610 PAC motif PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00086 572 614 5.3E-6 T 26-04-2016 IPR001610 PAC motif PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00086 702 744 0.012 T 26-04-2016 IPR001610 PAC motif PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:1.10.287.130 758 825 8.3E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00073 1306 1408 4.1E-5 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.30.565.10 830 995 1.9E-42 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 466 1.7E-24 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 500 620 1.2E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF01627 Hpt domain 1315 1397 2.8E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423 702 995 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423 24 557 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.40.50.2300 1145 1280 3.3E-35 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF52172 1155 1279 9.82E-35 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF08447 PAS fold 649 738 3.9E-17 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423:SF486 1134 1280 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423:SF486 24 557 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:1.20.120.160 1307 1377 2.6E-16 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423:SF486 702 995 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00091 626 696 0.0018 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00091 491 559 6.2E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00091 345 411 3.0E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF55785 504 621 6.63E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF55874 818 988 1.7E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF00072 Response regulator receiver domain 1161 1270 8.6E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF00072 Response regulator receiver domain 1012 1129 1.2E-13 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 970 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 935 945 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 931 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 989 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 PANTHER PTHR24423 1134 1280 3.9E-228 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF00989 PAS fold 346 457 7.2E-15 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF55785 611 742 5.41E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.40.50.2300 1007 1140 1.5E-26 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF47384 748 830 2.55E-21 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00448 1009 1130 1.5E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00448 1158 1273 2.6E-33 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 876 991 3.8E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM01079 77 267 1.2E-60 T 26-04-2016 IPR006189 CHASE domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF55785 344 450 1.31E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF52172 1007 1135 1.71E-27 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF03924 CHASE domain 80 263 5.2E-43 T 26-04-2016 IPR006189 CHASE domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 764 829 1.4E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.30.450.20 336 458 5.7E-23 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.30.450.20 482 603 6.9E-21 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Gene3D G3DSA:3.30.450.20 604 757 2.4E-28 T 26-04-2016 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 Pfam PF13426 PAS domain 502 613 8.7E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SUPERFAMILY SSF47226 1256 1378 7.59E-17 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS04210 ef380b3cb79d53d5b9130c1fce09fc92 1417 SMART SM00388 764 829 2.1E-23 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.4E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.4E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.4E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.4E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 Gene3D G3DSA:3.40.50.720 2 243 3.3E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.4E-40 T 26-04-2016 PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 SUPERFAMILY SSF51735 2 244 2.7E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PANTHER PTHR24322 147 179 5.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PANTHER PTHR24322 11 131 5.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 3.8E-5 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.8E-5 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PANTHER PTHR24322:SF449 147 179 5.2E-37 T 26-04-2016 PAM18_RS14445 b0d7e2482264b890cd96105741abf410 246 PANTHER PTHR24322:SF449 11 131 5.2E-37 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Gene3D G3DSA:3.30.450.20 352 474 1.0E-27 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SUPERFAMILY SSF55785 349 474 4.35E-28 T 26-04-2016 IPR000014 PAS domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SUPERFAMILY SSF55073 492 647 1.18E-46 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Pfam PF05228 CHASE4 domain 53 215 3.6E-28 T 26-04-2016 IPR007892 CHASE4 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Pfam PF00989 PAS fold 363 473 8.8E-16 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 641 2.5E-45 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Pfam PF00672 HAMP domain 291 359 6.4E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SMART SM00304 310 362 3.2E-7 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SMART SM00091 362 428 6.3E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 Gene3D G3DSA:3.30.70.270 488 649 3.4E-56 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SMART SM00267 476 647 1.9E-63 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 PANTHER PTHR10799 199 326 1.7E-37 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 PANTHER PTHR10799 520 640 1.7E-37 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SMART SM00086 434 476 8.1E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 485 643 2.9E-42 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 359 483 3.2E-23 T 26-04-2016 IPR000014 PAS domain PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 PANTHER PTHR10799:SF774 199 326 1.7E-37 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 PANTHER PTHR10799:SF774 520 640 1.7E-37 T 26-04-2016 PAM18_RS21415 0884a355741481b15c9de39b746d029a 651 SUPERFAMILY SSF158472 311 359 6.8E-5 T 26-04-2016 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 SUPERFAMILY SSF52540 8 194 1.77E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 239 418 7.3E-31 T 26-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 PANTHER PTHR21343:SF6 3 435 3.5E-152 T 26-04-2016 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 Gene3D G3DSA:3.40.50.300 6 193 2.4E-20 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 PANTHER PTHR21343 3 435 3.5E-152 T 26-04-2016 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 SUPERFAMILY SSF52317 235 428 1.92E-31 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 6 421 39.095 T 26-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 430 5.4E-82 T 26-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 159 2.1E-17 T 26-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAM18_RS19210 5b6fa9c2becec9be4e7e5aac1c5060c7 435 Gene3D G3DSA:3.40.50.880 238 431 5.9E-25 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Gene3D G3DSA:3.20.20.70 6 288 5.9E-117 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Gene3D G3DSA:2.40.50.100 534 605 3.9E-25 T 26-04-2016 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF02436 Conserved carboxylase domain 297 487 6.2E-57 T 26-04-2016 IPR003379 Carboxylase, conserved domain PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 PANTHER PTHR18866 4 605 4.3E-252 T 26-04-2016 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF00364 Biotin-requiring enzyme 540 605 2.3E-17 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF89000 302 452 1.61E-51 T 26-04-2016 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 Pfam PF00682 HMGL-like 12 273 1.1E-50 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF51230 532 605 2.36E-21 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 12 602 9.0E-257 T 26-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 PANTHER PTHR18866:SF109 4 605 4.3E-252 T 26-04-2016 PAM18_RS28395 4b4a6c6e8fb0df9b62e8e27f8d6a32e0 607 SUPERFAMILY SSF51569 5 305 6.04E-90 T 26-04-2016 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF04542 Sigma-70 region 2 20 83 1.9E-13 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 169 4.4E-22 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88946 18 94 8.63E-14 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 PANTHER PTHR30173:SF9 16 180 1.3E-44 T 26-04-2016 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.10.10 115 171 1.0E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF08281 Sigma-70, region 4 118 168 1.6E-12 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 PANTHER PTHR30173 16 180 1.3E-44 T 26-04-2016 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88659 103 173 6.73E-13 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13425 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.1740.10 22 83 1.9E-11 T 26-04-2016 PAM18_RS19935 b168105cb5152529268e7310a667338e 135 Gene3D G3DSA:3.10.180.10 1 114 2.5E-28 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS19935 b168105cb5152529268e7310a667338e 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 110 6.6E-12 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS19935 b168105cb5152529268e7310a667338e 135 SUPERFAMILY SSF54593 1 127 7.79E-31 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS19935 b168105cb5152529268e7310a667338e 135 PANTHER PTHR10374 1 110 5.0E-46 T 26-04-2016 PAM18_RS19935 b168105cb5152529268e7310a667338e 135 PANTHER PTHR10374:SF9 1 110 5.0E-46 T 26-04-2016 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 98 429 4.0E-139 T 26-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 1.2E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.2E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.2E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.2E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SUPERFAMILY SSF55874 265 429 2.36E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Gene3D G3DSA:1.10.287.130 201 261 5.9E-21 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SMART SM00387 321 433 3.4E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SUPERFAMILY SSF47384 195 276 7.65E-22 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SMART SM00091 102 170 6.6E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PANTHER PTHR24423:SF554 44 443 6.5E-173 T 26-04-2016 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Pfam PF11808 Domain of unknown function (DUF3329) 9 94 3.8E-28 T 26-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 275 5.0E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SMART SM00388 209 276 4.4E-21 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 SUPERFAMILY SSF55785 113 208 1.12E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Gene3D G3DSA:3.30.450.20 107 200 2.4E-9 T 26-04-2016 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Gene3D G3DSA:3.30.565.10 262 429 4.9E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 430 4.5E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 Pfam PF00989 PAS fold 102 156 1.5E-5 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS28000 85e86cc0a8bf055d533b970410769dce 443 PANTHER PTHR24423 44 443 6.5E-173 T 26-04-2016 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF52172 1 118 3.42E-36 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:3.40.50.2300 1 125 4.4E-33 T 26-04-2016 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.4E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF46894 123 217 2.83E-25 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00448 1 112 7.1E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 PANTHER PTHR26402:SF279 1 216 1.7E-131 T 26-04-2016 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:1.10.10.10 126 217 1.3E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00862 146 217 2.9E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11905 10abdb2737a7e3547d6dbebb73c00631 223 PANTHER PTHR26402 1 216 1.7E-131 T 26-04-2016 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 PIRSF PIRSF015626 8 279 3.6E-74 T 26-04-2016 IPR003786 Protein FdhD GO:0016783 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 PANTHER PTHR30592:SF1 5 274 3.0E-121 T 26-04-2016 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 PANTHER PTHR30592 5 274 3.0E-121 T 26-04-2016 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 262 1.9E-48 T 26-04-2016 IPR003786 Protein FdhD GO:0016783 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 Gene3D G3DSA:3.40.140.10 144 273 7.2E-41 T 26-04-2016 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 Pfam PF02634 FdhD/NarQ family 41 273 4.6E-67 T 26-04-2016 IPR003786 Protein FdhD GO:0016783 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 Gene3D G3DSA:3.10.20.10 42 127 1.5E-26 T 26-04-2016 PAM18_RS27085 16709ebfe031da05ce6bedf4862d16ce 279 SUPERFAMILY SSF53927 36 273 7.82E-69 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PAM18_RS02240 c76cfb80b5903a263bb67f0eaeb8f7c2 496 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 38 455 7.0E-92 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS02240 c76cfb80b5903a263bb67f0eaeb8f7c2 496 PANTHER PTHR30618:SF0 1 488 6.0E-192 T 26-04-2016 PAM18_RS02240 c76cfb80b5903a263bb67f0eaeb8f7c2 496 PANTHER PTHR30618 1 488 6.0E-192 T 26-04-2016 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 Gene3D G3DSA:3.40.190.10 84 190 4.1E-19 T 26-04-2016 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 Gene3D G3DSA:1.10.10.10 1 82 4.4E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 SUPERFAMILY SSF46785 1 110 7.26E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 PANTHER PTHR30126 1 305 4.0E-194 T 26-04-2016 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 SUPERFAMILY SSF53850 89 293 8.15E-34 T 26-04-2016 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.1E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 Pfam PF03466 LysR substrate binding domain 87 289 9.2E-36 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 PANTHER PTHR30126:SF10 1 305 4.0E-194 T 26-04-2016 PAM18_RS15025 6da8bf2c988ef235edd837afb39a4f58 317 Gene3D G3DSA:3.40.190.10 191 262 1.3E-10 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 PANTHER PTHR31223 89 344 4.6E-176 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 PANTHER PTHR31223 361 386 4.6E-176 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF03641 Possible lysine decarboxylase 192 331 1.9E-31 T 26-04-2016 IPR031100 LOG family PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF11892 Domain of unknown function (DUF3412) 335 456 6.6E-56 T 26-04-2016 IPR021826 Protein of unknown function DUF3412 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.40.50.450 128 455 3.9E-118 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 SUPERFAMILY SSF102405 122 331 2.14E-41 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF14793 Domain of unknown function (DUF4478) 10 115 2.1E-44 T 26-04-2016 IPR027820 Domain of unknown function DUF4478 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.30.1850.10 7 118 1.5E-49 T 26-04-2016 IPR027820 Domain of unknown function DUF4478 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 PANTHER PTHR31223:SF12 89 344 4.6E-176 T 26-04-2016 PAM18_RS04195 44087d2f33d192823aa8bb0e61aa743e 461 PANTHER PTHR31223:SF12 361 386 4.6E-176 T 26-04-2016 PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 SUPERFAMILY SSF52821 90 225 3.98E-29 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 Gene3D G3DSA:3.40.250.10 103 226 3.2E-39 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 Pfam PF00581 Rhodanese-like domain 115 210 6.0E-7 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 PANTHER PTHR22778 3 290 6.3E-110 T 26-04-2016 PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 46.668 T 26-04-2016 IPR020936 Uncharacterised protein family UPF0176 PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 SMART SM00450 113 214 7.0E-16 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS21360 82a67d8dedc755dc552c53a719d73350 312 PANTHER PTHR22778:SF12 3 290 6.3E-110 T 26-04-2016 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 PANTHER PTHR36445:SF1 1 298 2.5E-101 T 26-04-2016 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 294 32.589 T 26-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 Gene3D G3DSA:3.10.270.10 5 158 4.4E-75 T 26-04-2016 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 Gene3D G3DSA:3.10.270.10 191 293 4.4E-75 T 26-04-2016 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 PANTHER PTHR36445 1 298 2.5E-101 T 26-04-2016 PAM18_RS28930 dcaa014d7a309e0e8becbff87ebe765b 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 289 6.1E-68 T 26-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS10420 99985ea7fb41ef1eb98ef78f1011acaa 369 PANTHER PTHR22893:SF24 1 365 4.9E-247 T 26-04-2016 PAM18_RS10420 99985ea7fb41ef1eb98ef78f1011acaa 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 1.5E-93 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS10420 99985ea7fb41ef1eb98ef78f1011acaa 369 PANTHER PTHR22893 1 365 4.9E-247 T 26-04-2016 PAM18_RS10420 99985ea7fb41ef1eb98ef78f1011acaa 369 SUPERFAMILY SSF51395 3 365 1.31E-129 T 26-04-2016 PAM18_RS10420 99985ea7fb41ef1eb98ef78f1011acaa 369 Gene3D G3DSA:3.20.20.70 4 362 5.3E-139 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SMART SM00490 458 544 8.3E-19 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 PANTHER PTHR24029 1 670 0.0 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF52540 2 413 9.98E-139 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 417 578 7.3E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 387 408 1.8E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 245 337 1.8E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.40.50.300 5 158 1.7E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 118 5.6E-9 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:3.30.2060.10 159 232 5.6E-10 T 26-04-2016 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF02151 UvrB/uvrC motif 632 665 3.8E-9 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Gene3D G3DSA:4.10.860.10 626 668 1.8E-17 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF00271 Helicase conserved C-terminal domain 433 543 1.4E-18 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Pfam PF12344 Ultra-violet resistance protein B 550 592 2.0E-22 T 26-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF46600 626 667 1.7E-11 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SMART SM00487 8 424 3.8E-30 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 666 43.739 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 664 0.0 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF52540 36 81 1.61E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09355 0b2dcac1478da7b1b975d99c4835f401 670 SUPERFAMILY SSF52540 457 581 1.61E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 199 2.9E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 PANTHER PTHR26402:SF546 7 200 5.1E-125 T 26-04-2016 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 SMART SM00448 7 118 3.5E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 PANTHER PTHR26402 7 200 5.1E-125 T 26-04-2016 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 Pfam PF00072 Response regulator receiver domain 9 118 1.5E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 Gene3D G3DSA:1.10.10.10 127 206 1.3E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 Gene3D G3DSA:3.40.50.2300 7 126 1.3E-32 T 26-04-2016 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 4.2E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 4.2E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 4.2E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 SMART SM00421 142 199 5.5E-16 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 SUPERFAMILY SSF46894 132 206 3.03E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS03790 94b10d0a9303b6bd44667a8a3df87f28 214 SUPERFAMILY SSF52172 9 156 2.85E-33 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 6.4E-59 T 26-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 Gene3D G3DSA:3.60.140.10 2 241 2.3E-96 T 26-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 239 6.8E-73 T 26-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 PANTHER PTHR30616 1 242 2.2E-141 T 26-04-2016 PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 SUPERFAMILY SSF64438 3 241 7.14E-85 T 26-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PAM18_RS23690 8f229b4be5446e6bb0d4f924fdd8d4e4 242 PANTHER PTHR30616:SF3 1 242 2.2E-141 T 26-04-2016 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 7.6E-154 T 26-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 PANTHER PTHR13710 1 600 3.7E-286 T 26-04-2016 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SMART SM00490 242 323 4.6E-25 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Pfam PF00270 DEAD/DEAH box helicase 21 180 1.5E-18 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SUPERFAMILY SSF52540 200 444 4.57E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SMART SM00956 404 507 6.9E-47 T 26-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SMART SM00341 528 608 4.2E-20 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SUPERFAMILY SSF52540 3 189 1.52E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Gene3D G3DSA:1.10.10.10 336 511 1.5E-58 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Gene3D G3DSA:1.10.10.60 613 646 6.8E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Gene3D G3DSA:1.10.150.80 529 600 1.0E-19 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Pfam PF00570 HRDC domain 533 598 1.7E-22 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Gene3D G3DSA:3.40.50.300 198 335 7.1E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 599 1.1E-245 T 26-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Pfam PF00271 Helicase conserved C-terminal domain 219 323 1.7E-15 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Gene3D G3DSA:3.40.50.300 3 195 4.3E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SMART SM00487 14 210 6.8E-31 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 PANTHER PTHR13710:SF81 1 600 3.7E-286 T 26-04-2016 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 SUPERFAMILY SSF47819 527 602 3.05E-22 T 26-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Pfam PF16124 RecQ zinc-binding 335 396 3.1E-20 T 26-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain PAM18_RS08330 c859e8d1eb11a299fb0ef90815d56f3b 712 Pfam PF09382 RQC domain 401 510 1.2E-35 T 26-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 PAM18_RS11600 c95b723694b6a43ba231f043a3cc92c5 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 338 3.1E-49 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS11600 c95b723694b6a43ba231f043a3cc92c5 411 PANTHER PTHR22893:SF6 1 345 9.5E-168 T 26-04-2016 PAM18_RS11600 c95b723694b6a43ba231f043a3cc92c5 411 PANTHER PTHR22893 1 345 9.5E-168 T 26-04-2016 PAM18_RS11600 c95b723694b6a43ba231f043a3cc92c5 411 SUPERFAMILY SSF51395 2 349 1.1E-102 T 26-04-2016 PAM18_RS11600 c95b723694b6a43ba231f043a3cc92c5 411 Gene3D G3DSA:3.20.20.70 2 342 5.1E-113 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 121 360 0.0077 T 26-04-2016 IPR020803 Polyketide synthase, methyltransferase domain PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 PIRSF PIRSF003085 1 394 1.2E-129 T 26-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 SUPERFAMILY SSF53335 109 377 1.4E-85 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 Pfam PF02353 Mycolic acid cyclopropane synthetase 98 372 2.6E-106 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 PANTHER PTHR10108:SF743 309 390 4.3E-136 T 26-04-2016 PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 PANTHER PTHR10108:SF743 93 292 4.3E-136 T 26-04-2016 PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 Gene3D G3DSA:3.40.50.150 100 374 2.2E-100 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 PANTHER PTHR10108 309 390 4.3E-136 T 26-04-2016 PAM18_RS28965 94ca51d6c0ee032c219ce0df4588dee4 394 PANTHER PTHR10108 93 292 4.3E-136 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 616 46.887 T 26-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.601.10 112 452 7.9E-134 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88946 115 450 7.72E-105 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 456 507 5.5E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 1.2E-37 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 513 615 9.16E-27 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 5.7E-30 T 26-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04542 Sigma-70 region 2 383 452 1.7E-21 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04545 Sigma-70, region 4 551 604 9.0E-19 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 407 420 6.5E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 576 591 6.5E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 555 567 6.5E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 591 602 6.5E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 431 439 6.5E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 3.9E-13 T 26-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04539 Sigma-70 region 3 462 538 7.2E-30 T 26-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PANTHER PTHR30603 7 152 5.3E-256 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PANTHER PTHR30603 330 616 5.3E-256 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04546 Sigma-70, non-essential region 139 352 2.5E-65 T 26-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 456 529 1.0E-20 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 2.8E-122 T 26-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PANTHER PTHR30603:SF0 7 152 5.3E-256 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 PANTHER PTHR30603:SF0 330 616 5.3E-256 T 26-04-2016 PAM18_RS02920 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 546 616 1.1E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07675 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 46 147 8.37E-7 T 26-04-2016 PAM18_RS07675 ab81ad4fe4b86eda17e794bb85af857e 299 TIGRFAM TIGR00688 rarD: protein RarD 6 260 8.2E-56 T 26-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 PAM18_RS07675 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 182 287 8.63E-9 T 26-04-2016 PAM18_RS07675 ab81ad4fe4b86eda17e794bb85af857e 299 PANTHER PTHR22911 1 297 2.5E-166 T 26-04-2016 PAM18_RS07675 ab81ad4fe4b86eda17e794bb85af857e 299 PANTHER PTHR22911:SF57 1 297 2.5E-166 T 26-04-2016 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 Pfam PF02684 Lipid-A-disaccharide synthetase 7 360 3.8E-121 T 26-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 374 1.5E-127 T 26-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 SUPERFAMILY SSF53756 6 375 2.45E-38 T 26-04-2016 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 Gene3D G3DSA:3.40.50.2000 159 288 5.2E-7 T 26-04-2016 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 PANTHER PTHR30372 5 378 1.5E-135 T 26-04-2016 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 PANTHER PTHR30372:SF0 5 378 1.5E-135 T 26-04-2016 PAM18_RS06595 e70b995feb7ad37c410a33475986c562 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 376 44.072 T 26-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01382 124 252 1.5E-90 T 26-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 PANTHER PTHR13691 1 273 3.3E-142 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.30.30.30 119 195 1.2E-31 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 26-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:4.10.950.10 196 272 1.6E-34 T 26-04-2016 IPR014726 Ribosomal protein L2, domain 3 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50249 2 125 1.27E-47 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.774 T 26-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.40.50.140 1 114 2.1E-49 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.1E-32 T 26-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 PIRSF PIRSF002158 12 273 2.3E-100 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 7.2E-56 T 26-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.7E-128 T 26-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50104 127 272 1.32E-60 T 26-04-2016 IPR008991 Translation protein SH3-like domain PAM18_RS03440 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01383 42 118 1.3E-43 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 SUPERFAMILY SSF50331 238 363 7.05E-26 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 PANTHER PTHR24220 5 295 5.2E-216 T 26-04-2016 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Gene3D G3DSA:2.40.50.140 289 348 1.6E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Gene3D G3DSA:2.40.50.100 241 288 1.2E-7 T 26-04-2016 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Gene3D G3DSA:2.40.50.100 349 363 1.2E-7 T 26-04-2016 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Pfam PF00005 ABC transporter 21 163 3.0E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Gene3D G3DSA:3.40.50.300 3 236 5.0E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 Pfam PF03459 TOBE domain 297 353 6.5E-9 T 26-04-2016 IPR005116 Transport-associated OB, type 1 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 PANTHER PTHR24220:SF446 5 295 5.2E-216 T 26-04-2016 PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 SMART SM00382 30 213 1.5E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS09150 446db6fe5cb3888fddbc83fc4208b5b6 386 SUPERFAMILY SSF52540 4 245 5.9E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 226 235 - T 26-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 PANTHER PTHR11751:SF347 23 365 1.3E-120 T 26-04-2016 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 Gene3D G3DSA:3.90.1150.10 269 366 1.8E-19 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 364 2.8E-116 T 26-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 SUPERFAMILY SSF53383 17 366 1.67E-80 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 PANTHER PTHR11751 23 365 1.3E-120 T 26-04-2016 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 Pfam PF00155 Aminotransferase class I and II 38 362 3.0E-49 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 366 62.766 T 26-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PAM18_RS09260 2c2611778d1226b408e71f8069625db4 369 Gene3D G3DSA:3.40.640.10 51 268 8.8E-67 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 Gene3D G3DSA:2.40.30.10 93 180 6.2E-18 T 26-04-2016 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PANTHER PTHR19370 29 305 5.4E-78 T 26-04-2016 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 128 3.7E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 141 3.7E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 3.7E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 SUPERFAMILY SSF52343 188 305 1.15E-20 T 26-04-2016 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PANTHER PTHR19370:SF68 29 305 5.4E-78 T 26-04-2016 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 Gene3D G3DSA:3.10.20.30 8 86 3.0E-23 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 Pfam PF00175 Oxidoreductase NAD-binding domain 196 254 4.7E-6 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 Gene3D G3DSA:3.40.50.80 190 305 8.9E-18 T 26-04-2016 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 SUPERFAMILY SSF54292 8 85 4.98E-24 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 SUPERFAMILY SSF63380 100 179 8.96E-17 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 214 7.7E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 141 7.7E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 288 296 7.7E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS22595 50c3f83dd0fb4ee8a0ae61a22f9da3f0 308 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 76 1.6E-15 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS04330 b07eac8379ab74f3ba9e07ad222a75c0 96 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 1.3E-29 T 26-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 PAM18_RS04330 b07eac8379ab74f3ba9e07ad222a75c0 96 PIRSF PIRSF028291 1 96 3.3E-43 T 26-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 Gene3D G3DSA:3.30.1780.10 6 140 1.1E-28 T 26-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 SUPERFAMILY SSF51735 6 313 2.72E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 Gene3D G3DSA:3.40.50.720 141 296 4.8E-29 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 PANTHER PTHR13812 5 313 3.3E-79 T 26-04-2016 PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 PANTHER PTHR13812:SF19 5 313 3.3E-79 T 26-04-2016 PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 PIRSF PIRSF001439 1 315 1.9E-52 T 26-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PAM18_RS05460 3cd3d4e3b4801fae01d91fb672cc8ebc 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 309 6.4E-35 T 26-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PAM18_RS15240 a1e8cb9ab02db783ef2f70bcb3dee7f7 476 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 19 440 5.7E-54 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS15240 a1e8cb9ab02db783ef2f70bcb3dee7f7 476 PANTHER PTHR31806 3 465 3.7E-155 T 26-04-2016 PAM18_RS15240 a1e8cb9ab02db783ef2f70bcb3dee7f7 476 PANTHER PTHR31806:SF1 3 465 3.7E-155 T 26-04-2016 PAM18_RS15240 a1e8cb9ab02db783ef2f70bcb3dee7f7 476 PIRSF PIRSF002744 1 465 2.8E-115 T 26-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00501 AMP-binding enzyme 1577 1982 1.4E-98 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00501 AMP-binding enzyme 4145 4542 1.7E-82 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00501 AMP-binding enzyme 3093 3489 2.3E-100 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00501 AMP-binding enzyme 518 912 7.8E-99 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 2168 2367 7.23E-43 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF56801 476 1042 2.75E-158 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 4289 4445 8.5E-35 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 668 817 6.0E-37 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 1728 1893 8.8E-49 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 PANTHER PTHR24095 693 2148 0.0 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 PANTHER PTHR24095 2600 3568 0.0 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.30.300.30 907 1032 8.1E-37 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.30.300.30 1977 2096 1.1E-40 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.30.300.30 3484 3598 3.6E-38 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00975 Thioesterase domain 4739 4848 1.3E-25 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 2354 2608 6.56E-44 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF56801 4126 4664 2.09E-147 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF47336 2085 2155 3.53E-19 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:1.10.1200.10 1033 1098 4.2E-28 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:1.10.1200.10 4639 4717 2.3E-25 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:1.10.1200.10 2097 2157 1.2E-27 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:1.10.1200.10 3599 3660 3.7E-25 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 3870 4112 4.56E-48 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 3256 3401 2.8E-46 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 1116 1288 4.0E-53 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SMART SM00823 Phosphopantetheine attachment site 3594 3662 7.8E-4 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SMART SM00823 Phosphopantetheine attachment site 4651 4722 0.81 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SMART SM00823 Phosphopantetheine attachment site 1029 1098 5.6E-4 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SMART SM00823 Phosphopantetheine attachment site 2093 2161 2.2E-5 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.30.300.30 4536 4638 1.3E-35 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00668 Condensation domain 49 347 2.7E-78 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00668 Condensation domain 1116 1403 3.4E-73 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00668 Condensation domain 2173 2468 5.8E-63 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00668 Condensation domain 2637 2927 1.1E-60 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00668 Condensation domain 3696 3984 8.6E-62 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 514 667 4.8E-49 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 4136 4288 7.5E-46 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 1570 1727 6.5E-52 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.980 3088 3255 1.6E-52 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF56801 3051 3606 4.58E-165 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1053 1068 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3618 3633 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4675 4690 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2117 2132 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 1294 1539 2.33E-62 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00550 Phosphopantetheine attachment site 1032 1094 2.9E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00550 Phosphopantetheine attachment site 2094 2154 2.8E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00550 Phosphopantetheine attachment site 4654 4717 3.7E-11 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF00550 Phosphopantetheine attachment site 3595 3657 3.9E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF56801 1533 2106 7.33E-166 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF47336 4643 4716 4.32E-16 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 234 486 2.89E-63 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4163 4566 6.7E-118 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1598 2006 1.7E-135 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3115 3513 2.5E-139 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 936 1.1E-130 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF47336 1022 1095 3.66E-20 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2472 2629 1.2E-45 T 26-04-2016 IPR010060 Non-ribosomal peptide synthase PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF53474 4718 4981 1.03E-42 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 52 228 1.22E-51 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4283 4294 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1718 1729 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3234 3245 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 2642 2812 2.33E-42 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:2.30.38.10 1894 1972 2.9E-25 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:2.30.38.10 4452 4531 3.4E-21 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:2.30.38.10 823 902 1.6E-26 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:2.30.38.10 3402 3478 3.0E-27 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 2814 3080 1.56E-54 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13745 HxxPF-repeated domain 369 464 3.6E-32 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13745 HxxPF-repeated domain 1430 1522 1.7E-30 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF47336 3586 3656 7.46E-18 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 PANTHER PTHR24095:SF173 693 2148 0.0 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 PANTHER PTHR24095:SF173 2600 3568 0.0 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 SUPERFAMILY SSF52777 3700 3868 4.34E-45 T 26-04-2016 PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.1820 4721 4842 5.6E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Gene3D G3DSA:3.40.50.1820 4921 4983 5.6E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 1990 2067 8.0E-12 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 4550 4626 1.3E-10 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 920 1003 3.7E-9 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13585 b050ae4d5711d0db3028eb592ae8b36b 4991 Pfam PF13193 AMP-binding enzyme C-terminal domain 3497 3568 3.5E-12 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS02805 4c346e45de1b5465b3dc2d2a3d1eea84 113 SUPERFAMILY SSF141488 32 111 1.44E-15 T 26-04-2016 IPR018660 C-type lysozyme, inhibitor PAM18_RS02805 4c346e45de1b5465b3dc2d2a3d1eea84 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 104 2.3E-12 T 26-04-2016 IPR018660 C-type lysozyme, inhibitor PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:3.10.50.40 156 214 6.6E-9 T 26-04-2016 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF102735 1 130 8.5E-41 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:1.10.3120.10 215 387 2.1E-58 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 PANTHER PTHR30560 1 429 5.4E-134 T 26-04-2016 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 5.6E-43 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:3.30.70.1050 1 117 2.6E-41 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Hamap MF_00303 Trigger factor [tig]. 1 417 21.499 T 26-04-2016 IPR005215 Trigger factor GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 TIGRFAM TIGR00115 tig: trigger factor 11 410 1.0E-138 T 26-04-2016 IPR005215 Trigger factor GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 PANTHER PTHR30560:SF3 1 429 5.4E-134 T 26-04-2016 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 PIRSF PIRSF003095 1 432 2.0E-123 T 26-04-2016 IPR005215 Trigger factor GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF54534 90 241 1.39E-34 T 26-04-2016 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF109998 248 428 8.63E-47 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 411 3.5E-36 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PAM18_RS16620 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 2.0E-12 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 PANTHER PTHR11986 1 461 7.3E-290 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 PANTHER PTHR11986:SF74 1 461 7.3E-290 T 26-04-2016 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 Pfam PF00202 Aminotransferase class-III 55 434 6.7E-40 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 SUPERFAMILY SSF53383 45 455 1.24E-77 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 Gene3D G3DSA:3.90.1150.10 27 93 1.1E-15 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 Gene3D G3DSA:3.90.1150.10 350 438 1.1E-15 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04340 85cee4718d722e4c4fbd2e2f920dfa79 461 Gene3D G3DSA:3.40.640.10 94 345 1.4E-44 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS01350 92c57876b4731e1973c392cf9a0d03d9 135 Pfam PF07883 Cupin domain 48 117 2.7E-15 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS01350 92c57876b4731e1973c392cf9a0d03d9 135 PANTHER PTHR38599:SF1 1 135 2.8E-43 T 26-04-2016 PAM18_RS01350 92c57876b4731e1973c392cf9a0d03d9 135 SUPERFAMILY SSF51182 31 117 1.15E-17 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS01350 92c57876b4731e1973c392cf9a0d03d9 135 PANTHER PTHR38599 1 135 2.8E-43 T 26-04-2016 PAM18_RS01350 92c57876b4731e1973c392cf9a0d03d9 135 Gene3D G3DSA:2.60.120.10 35 119 2.4E-20 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 Pfam PF01761 3-dehydroquinate synthase 65 323 1.8E-108 T 26-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 SUPERFAMILY SSF56796 3 354 2.62E-119 T 26-04-2016 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.871 T 26-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 Gene3D G3DSA:3.40.50.1970 2 170 6.7E-69 T 26-04-2016 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 Gene3D G3DSA:1.20.1090.10 171 355 3.6E-65 T 26-04-2016 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 PIRSF PIRSF001455 3 359 1.4E-106 T 26-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 PANTHER PTHR21090 1 359 4.3E-206 T 26-04-2016 PAM18_RS26355 84d8afd07ab66e9827677beca12e42ca 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 1.2E-115 T 26-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 PANTHER PTHR11019:SF25 102 318 1.0E-103 T 26-04-2016 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:3.40.50.880 84 215 2.4E-20 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:1.10.10.60 216 263 1.5E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 4.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 4.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 Pfam PF12833 Helix-turn-helix domain 233 311 7.9E-24 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 263 314 1.16E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 PANTHER PTHR11019 102 318 1.0E-103 T 26-04-2016 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF52317 5 192 3.41E-24 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 210 261 1.43E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 SMART SM00342 227 310 1.3E-33 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21180 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:1.10.10.60 264 314 6.7E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07930 caff4a2d21f8b045f92dcef3bc61fb83 585 Pfam PF06980 Protein of unknown function (DUF1302) 31 585 1.0E-222 T 26-04-2016 IPR010727 Protein of unknown function DUF1302 PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 SUPERFAMILY SSF51658 39 236 2.67E-5 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 Hamap MF_00697 UPF0276 protein . 9 277 45.462 T 26-04-2016 IPR007801 Uncharacterised protein family UPF0276 PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 PANTHER PTHR42194 3 284 9.4E-138 T 26-04-2016 PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 Pfam PF05114 Protein of unknown function (DUF692) 8 269 7.3E-98 T 26-04-2016 IPR007801 Uncharacterised protein family UPF0276 PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 Gene3D G3DSA:3.20.20.150 6 273 2.2E-95 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS08645 c8f14bbba3ffbdb5731e8af751ec9a05 284 PANTHER PTHR42194:SF1 3 284 9.4E-138 T 26-04-2016 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 209 7.2E-105 T 26-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 Pfam PF04199 Putative cyclase 8 152 1.1E-17 T 26-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 Hamap MF_01969 Kynurenine formamidase [kynB]. 5 209 45.146 T 26-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 PANTHER PTHR31118 5 206 1.3E-54 T 26-04-2016 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 SUPERFAMILY SSF102198 4 207 7.98E-60 T 26-04-2016 PAM18_RS15195 276296b45ad0915f028bb486ee70cf66 213 Gene3D G3DSA:3.50.30.50 4 207 4.6E-54 T 26-04-2016 PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 234 3.5E-53 T 26-04-2016 IPR022488 Polyphosphate kinase-2-related PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 495 3.0E-99 T 26-04-2016 IPR022488 Polyphosphate kinase-2-related PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 PANTHER PTHR34383 4 489 2.9E-298 T 26-04-2016 PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 SUPERFAMILY SSF52540 302 489 1.21E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 SUPERFAMILY SSF52540 41 215 2.57E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 PANTHER PTHR34383:SF3 4 489 2.9E-298 T 26-04-2016 PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 491 1.5E-235 T 26-04-2016 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 Gene3D G3DSA:3.40.50.300 1 244 1.4E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07765 ad6edecc9cfd01e9f469a7bf67b67648 496 Gene3D G3DSA:3.40.50.300 249 494 9.0E-102 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02370 929736f564d8e587b26a3441955f0bb2 316 PANTHER PTHR40274:SF2 1 316 3.6E-158 T 26-04-2016 PAM18_RS02370 929736f564d8e587b26a3441955f0bb2 316 PANTHER PTHR40274 1 316 3.6E-158 T 26-04-2016 PAM18_RS02370 929736f564d8e587b26a3441955f0bb2 316 SUPERFAMILY SSF101898 31 274 1.6E-31 T 26-04-2016 PAM18_RS02370 929736f564d8e587b26a3441955f0bb2 316 Gene3D G3DSA:2.120.10.30 24 273 3.5E-26 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS02370 929736f564d8e587b26a3441955f0bb2 316 PIRSF PIRSF026412 1 316 2.8E-123 T 26-04-2016 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 Gene3D G3DSA:1.10.10.10 140 210 3.8E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 SMART SM00421 150 207 1.1E-23 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 PANTHER PTHR26402:SF474 4 210 5.7E-78 T 26-04-2016 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 PANTHER PTHR26402 4 210 5.7E-78 T 26-04-2016 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 Gene3D G3DSA:3.40.50.2300 3 131 4.7E-29 T 26-04-2016 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 SMART SM00448 4 119 2.2E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 4.4E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 SUPERFAMILY SSF52172 3 180 5.69E-26 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.5E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.5E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.5E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00072 Response regulator receiver domain 6 120 7.8E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS07110 97f2eabbbc87fc447916a662505090eb 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 Gene3D G3DSA:3.60.15.10 7 258 7.1E-87 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 SMART SM00849 12 170 1.7E-37 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 PANTHER PTHR11935:SF7 1 258 4.7E-97 T 26-04-2016 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 258 4.3E-26 T 26-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 PIRSF PIRSF005457 1 258 2.4E-103 T 26-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 258 44.422 T 26-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 SUPERFAMILY SSF56281 4 258 3.01E-72 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 258 3.4E-105 T 26-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 PANTHER PTHR11935 1 258 4.7E-97 T 26-04-2016 PAM18_RS16550 2a2bbeaf778d9b812c10e595e5bbe58a 258 Pfam PF00753 Metallo-beta-lactamase superfamily 14 170 2.9E-15 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 Gene3D G3DSA:3.30.465.10 147 264 1.0E-12 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 Gene3D G3DSA:3.30.43.10 57 146 2.5E-12 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 Pfam PF01565 FAD binding domain 88 215 7.7E-29 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 PANTHER PTHR11748:SF3 42 529 4.8E-154 T 26-04-2016 IPR025650 Alkyldihydroxyacetonephosphate synthase GO:0008609|GO:0008610 KEGG: 00565+2.5.1.26|UniPathway: UPA00781 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 PANTHER PTHR11748 42 529 4.8E-154 T 26-04-2016 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 Pfam PF02913 FAD linked oxidases, C-terminal domain 266 526 8.0E-47 T 26-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 SUPERFAMILY SSF55103 269 530 6.54E-37 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS09940 46ae94928d761ea0d30e68da0a95217f 531 SUPERFAMILY SSF56176 56 264 7.48E-42 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 SMART SM00342 228 314 3.6E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 Gene3D G3DSA:1.10.10.60 214 264 5.2E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 SUPERFAMILY SSF51215 75 177 1.44E-6 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 Pfam PF14525 AraC-binding-like domain 25 193 1.1E-26 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 PANTHER PTHR11019 48 318 1.1E-72 T 26-04-2016 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 SUPERFAMILY SSF46689 215 262 6.45E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 Gene3D G3DSA:1.10.10.60 265 313 2.8E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 Pfam PF12833 Helix-turn-helix domain 234 316 2.0E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 PANTHER PTHR11019:SF54 48 318 1.1E-72 T 26-04-2016 PAM18_RS12990 f4144e10be78808fc8eb80150a48c48f 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 310 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS27735 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:1.10.10.10 12 63 2.8E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27735 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF54909 73 159 3.35E-20 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS27735 5b105919850375226c4956c483327c26 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 26-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAM18_RS27735 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.3E-20 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS27735 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.3E-20 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS27735 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.3E-20 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS27735 5b105919850375226c4956c483327c26 162 PANTHER PTHR30154:SF0 3 160 5.0E-94 T 26-04-2016 PAM18_RS27735 5b105919850375226c4956c483327c26 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.0E-20 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS27735 5b105919850375226c4956c483327c26 162 PANTHER PTHR30154 3 160 5.0E-94 T 26-04-2016 PAM18_RS27735 5b105919850375226c4956c483327c26 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 1.6E-19 T 26-04-2016 PAM18_RS27735 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF46785 10 69 1.56E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27735 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:3.30.70.920 64 160 2.9E-31 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS27735 5b105919850375226c4956c483327c26 162 SMART SM00344 11 120 5.9E-48 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 PANTHER PTHR14359:SF20 2 401 4.2E-194 T 26-04-2016 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 Gene3D G3DSA:3.40.50.1950 2 185 6.6E-64 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.4E-71 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 SUPERFAMILY SSF52507 1 179 2.35E-59 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 Pfam PF02441 Flavoprotein 7 135 5.5E-32 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 395 1.5E-139 T 26-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 SUPERFAMILY SSF102645 184 400 6.8E-76 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 Gene3D G3DSA:3.40.50.10300 186 401 3.2E-87 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 PAM18_RS27795 30556d1d260b2a6b67fafedb7b951227 402 PANTHER PTHR14359 2 401 4.2E-194 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF52777 100 296 9.23E-21 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 ProSitePatterns PS00455 Putative AMP-binding domain signature. 694 705 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:1.10.1200.10 7 82 7.9E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:1.10.1200.10 1358 1424 1.4E-22 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:3.40.50.980 554 700 4.9E-33 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096:SF247 468 991 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096:SF247 1020 1040 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096:SF247 1303 1378 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF56801 1286 1333 1.92E-117 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF56801 543 991 1.92E-117 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1380 1395 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Pfam PF00501 AMP-binding enzyme 563 950 1.3E-82 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096 468 991 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096 1020 1040 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 PANTHER PTHR24096 1303 1378 6.2E-292 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF47336 6 117 9.95E-10 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:3.40.50.980 701 866 1.1E-35 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF52777 285 526 1.11E-40 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF53335 1109 1268 7.8E-10 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:3.40.50.150 1152 1267 3.8E-6 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Pfam PF00668 Condensation domain 103 398 4.1E-38 T 26-04-2016 IPR001242 Condensation domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 583 973 1.5E-111 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:3.30.300.30 1292 1357 9.3E-21 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:3.30.300.30 945 1000 9.3E-21 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Gene3D G3DSA:2.30.38.10 867 940 8.9E-24 T 26-04-2016 PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Pfam PF00550 Phosphopantetheine attachment site 1358 1421 5.5E-15 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Pfam PF00550 Phosphopantetheine attachment site 13 80 1.8E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 Pfam PF08415 Nonribosomal peptide synthase 421 476 8.2E-12 T 26-04-2016 IPR013624 Non-ribosomal peptide synthetase PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SUPERFAMILY SSF47336 1349 1421 6.28E-17 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS03640 b089e0045776f6927e3204920fe0e754 1438 SMART SM00823 Phosphopantetheine attachment site 1356 1425 2.3E-12 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS08785 91cc378e6d187665d8c6dbea75f826aa 159 Gene3D G3DSA:1.25.40.10 40 157 1.1E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS08785 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 86 122 11.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS08785 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 123 159 0.0041 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS08785 91cc378e6d187665d8c6dbea75f826aa 159 SUPERFAMILY SSF81901 41 158 6.8E-13 T 26-04-2016 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 PANTHER PTHR11070 117 291 2.0E-78 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 PANTHER PTHR11070 314 629 2.0E-78 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 Pfam PF00580 UvrD/REP helicase N-terminal domain 117 450 4.4E-25 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 SUPERFAMILY SSF52540 337 634 8.67E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 SUPERFAMILY SSF52540 113 253 8.67E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 PANTHER PTHR11070:SF7 117 291 2.0E-78 T 26-04-2016 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 PANTHER PTHR11070:SF7 314 629 2.0E-78 T 26-04-2016 PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 Gene3D G3DSA:3.40.50.300 347 452 5.0E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 Gene3D G3DSA:3.40.50.300 114 275 5.0E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19055 7e8e6ae8098fe717b970ed35397a5aeb 651 Gene3D G3DSA:3.40.50.300 465 640 5.3E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 26-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 PANTHER PTHR11730:SF6 1 402 3.3E-125 T 26-04-2016 PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 Pfam PF00909 Ammonium Transporter Family 19 395 8.9E-86 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 PANTHER PTHR11730 1 402 3.3E-125 T 26-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 SUPERFAMILY SSF111352 13 380 1.96E-91 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PAM18_RS09870 1872aedffbdbd57ef7d785f8fa30bbae 402 Gene3D G3DSA:1.10.3430.10 13 380 1.2E-88 T 26-04-2016 IPR029020 Ammonium/urea transporter PAM18_RS15755 881604a873e0d15e7d297c48dbb1fffc 437 PANTHER PTHR30588:SF0 1 437 5.6E-224 T 26-04-2016 PAM18_RS15755 881604a873e0d15e7d297c48dbb1fffc 437 PANTHER PTHR30588 1 437 5.6E-224 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS15755 881604a873e0d15e7d297c48dbb1fffc 437 Pfam PF05525 Branched-chain amino acid transport protein 7 427 6.4E-157 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS15755 881604a873e0d15e7d297c48dbb1fffc 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 4.0E-164 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 SUPERFAMILY SSF56784 1 194 1.03E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 173 7.8E-22 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 172 8.1E-19 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 PANTHER PTHR18901 1 222 1.3E-62 T 26-04-2016 PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 Gene3D G3DSA:3.40.50.1000 70 194 2.1E-38 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS15270 29d276506bed428ec92becf1fbd66a4d 222 PANTHER PTHR18901:SF9 1 222 1.3E-62 T 26-04-2016 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 Pfam PF01687 Riboflavin kinase 184 305 4.1E-36 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 SUPERFAMILY SSF82114 174 306 1.46E-43 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 Gene3D G3DSA:3.40.50.620 1 179 4.2E-66 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 PANTHER PTHR22749 1 309 3.8E-140 T 26-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 Pfam PF06574 FAD synthetase 15 167 1.8E-54 T 26-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 SMART SM00904 183 307 8.6E-60 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 Gene3D G3DSA:2.40.30.30 180 305 3.3E-38 T 26-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 305 3.6E-97 T 26-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 SUPERFAMILY SSF52374 17 178 1.69E-31 T 26-04-2016 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 PIRSF PIRSF004491 1 310 1.2E-103 T 26-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 PAM18_RS23785 476d3d5747862ae9d7604fb177b95dc6 312 PANTHER PTHR22749:SF0 1 309 3.8E-140 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 SUPERFAMILY SSF53756 14 411 4.93E-41 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526 18 46 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526 147 442 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526 76 122 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 Gene3D G3DSA:3.40.50.2000 268 380 2.0E-12 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526:SF399 18 46 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526:SF399 147 442 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 PANTHER PTHR12526:SF399 76 122 3.2E-76 T 26-04-2016 PAM18_RS28475 b2eaeb1407db3dd5ee7587cef8700882 460 Pfam PF00534 Glycosyl transferases group 1 268 415 2.6E-21 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS17110 6e54c5d13d0ded10892bf03254ebd54b 295 Pfam PF05844 YopD protein 1 295 3.0E-154 T 26-04-2016 IPR008898 YopD-like PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82693 553 653 2.49E-8 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PANTHER PTHR32063:SF7 5 1015 0.0 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82714 189 267 7.85E-10 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:3.30.70.1430 44 142 2.7E-22 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:3.30.2090.10 706 790 6.0E-15 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:3.30.2090.10 190 267 1.1E-9 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PANTHER PTHR32063 5 1015 0.0 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Pfam PF00873 AcrB/AcrD/AcrF family 8 1005 4.4E-157 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.8E-22 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:3.30.70.1430 557 644 3.7E-6 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:1.10.3850.10 277 493 3.9E-39 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 Gene3D G3DSA:1.10.3850.10 797 1009 2.4E-48 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82714 707 790 5.23E-15 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82693 272 327 1.39E-17 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82693 44 139 4.36E-19 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82693 141 186 1.39E-17 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82866 789 1010 3.66E-44 T 26-04-2016 PAM18_RS00800 8427acf9f9bac21cf402c52fbf7f79bb 1015 SUPERFAMILY SSF82866 295 492 8.11E-32 T 26-04-2016 PAM18_RS15630 0ea028f90a9dc52de1a84ab4bd094fa9 92 PANTHER PTHR10657 4 88 1.0E-31 T 26-04-2016 PAM18_RS15630 0ea028f90a9dc52de1a84ab4bd094fa9 92 Gene3D G3DSA:3.10.50.40 6 88 1.8E-30 T 26-04-2016 PAM18_RS15630 0ea028f90a9dc52de1a84ab4bd094fa9 92 Pfam PF00639 PPIC-type PPIASE domain 12 88 2.2E-19 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PAM18_RS15630 0ea028f90a9dc52de1a84ab4bd094fa9 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 26-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PAM18_RS15630 0ea028f90a9dc52de1a84ab4bd094fa9 92 SUPERFAMILY SSF54534 4 88 9.81E-27 T 26-04-2016 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 SUPERFAMILY SSF52972 2 185 5.3E-57 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 PANTHER PTHR11746:SF102 114 191 8.1E-38 T 26-04-2016 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 Pfam PF02545 Maf-like protein 4 185 1.6E-43 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 PIRSF PIRSF006305 1 191 4.9E-44 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 Gene3D G3DSA:3.90.950.10 2 189 1.3E-56 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.7E-54 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 30.825 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS10215 7dd3f948c455fec4830d8059c9d177aa 192 PANTHER PTHR11746 114 191 8.1E-38 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 Gene3D G3DSA:3.40.190.10 193 258 1.1E-9 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 SUPERFAMILY SSF53850 88 291 1.04E-33 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 Gene3D G3DSA:1.10.10.10 1 84 1.9E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 SUPERFAMILY SSF46785 1 86 4.54E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 PANTHER PTHR30293:SF0 1 292 1.2E-124 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 Gene3D G3DSA:3.40.190.10 88 192 7.5E-16 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 PANTHER PTHR30293 1 292 1.2E-124 T 26-04-2016 PAM18_RS27080 db63cecf51398d850035983c6dc0a6c0 293 Pfam PF03466 LysR substrate binding domain 87 289 5.6E-34 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 Gene3D G3DSA:3.40.50.1240 2 153 9.7E-34 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 SMART SM00855 2 110 3.4E-9 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 PANTHER PTHR20935 3 77 2.0E-13 T 26-04-2016 PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 SUPERFAMILY SSF53254 2 136 2.91E-23 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 2 136 1.2E-26 T 26-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PAM18_RS17585 edcbd1adab4f8e96405e961fbc277879 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 6.5E-14 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.40.50.180 54 90 2.1E-10 T 26-04-2016 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 PANTHER PTHR22617:SF26 1 159 1.3E-115 T 26-04-2016 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 PANTHER PTHR22617 1 159 1.3E-115 T 26-04-2016 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 SMART SM00260 11 148 5.6E-53 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 Pfam PF01584 CheW-like domain 15 151 7.0E-40 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 SUPERFAMILY SSF50341 11 154 2.88E-42 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18765 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.30.30.40 91 141 4.0E-8 T 26-04-2016 PAM18_RS07825 e18a041f324c9163b551debc4553eec6 262 PANTHER PTHR30151:SF22 1 262 3.0E-196 T 26-04-2016 PAM18_RS07825 e18a041f324c9163b551debc4553eec6 262 Gene3D G3DSA:1.10.3720.10 54 248 3.6E-29 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07825 e18a041f324c9163b551debc4553eec6 262 PANTHER PTHR30151 1 262 3.0E-196 T 26-04-2016 PAM18_RS07825 e18a041f324c9163b551debc4553eec6 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 245 3.6E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07825 e18a041f324c9163b551debc4553eec6 262 SUPERFAMILY SSF161098 55 236 7.85E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16465 52f4fd3f8b2e3b368d67d25a4dce266a 104 Pfam PF02036 SCP-2 sterol transfer family 16 102 3.1E-21 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS16465 52f4fd3f8b2e3b368d67d25a4dce266a 104 Gene3D G3DSA:3.30.1050.10 3 102 1.7E-29 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS16465 52f4fd3f8b2e3b368d67d25a4dce266a 104 SUPERFAMILY SSF55718 2 102 1.82E-28 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS16465 52f4fd3f8b2e3b368d67d25a4dce266a 104 PANTHER PTHR10094:SF13 23 102 6.0E-37 T 26-04-2016 PAM18_RS16465 52f4fd3f8b2e3b368d67d25a4dce266a 104 PANTHER PTHR10094 23 102 6.0E-37 T 26-04-2016 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 PANTHER PTHR10909 5 386 1.6E-283 T 26-04-2016 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Gene3D G3DSA:2.40.110.10 120 220 5.8E-31 T 26-04-2016 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Gene3D G3DSA:1.10.540.10 5 116 4.8E-30 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 SUPERFAMILY SSF56645 5 230 1.02E-60 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 364 8.1E-34 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 4.3E-25 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Gene3D G3DSA:1.20.140.10 221 385 1.2E-53 T 26-04-2016 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 SUPERFAMILY SSF47203 229 384 1.43E-43 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 PANTHER PTHR10909:SF285 5 386 1.6E-283 T 26-04-2016 PAM18_RS21250 b4289aae0b5893b21dbcc11af9fc9f91 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 218 2.4E-21 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS09835 e5442117c9c1700bb6b15fab40186e85 114 PANTHER PTHR38778 2 112 4.7E-56 T 26-04-2016 PAM18_RS09835 e5442117c9c1700bb6b15fab40186e85 114 PANTHER PTHR38778:SF1 2 112 4.7E-56 T 26-04-2016 PAM18_RS09835 e5442117c9c1700bb6b15fab40186e85 114 Pfam PF04320 Protein with unknown function (DUF469) 7 105 3.2E-36 T 26-04-2016 IPR007416 Protein of unknown function DUF469 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709:SF33 45 205 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709:SF33 246 359 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709:SF33 459 611 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Pfam PF07731 Multicopper oxidase 498 611 1.7E-25 T 26-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 ProSitePatterns PS00080 Multicopper oxidases signature 2. 591 602 - T 26-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709 45 205 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709 246 359 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 PANTHER PTHR11709 459 611 1.1E-126 T 26-04-2016 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Gene3D G3DSA:2.60.40.420 32 159 3.3E-32 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 4.1E-5 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Pfam PF00394 Multicopper oxidase 171 346 5.4E-32 T 26-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Gene3D G3DSA:2.60.40.420 167 375 7.3E-52 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 SUPERFAMILY SSF49503 460 608 4.37E-36 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Gene3D G3DSA:2.60.40.420 460 610 6.9E-34 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 Pfam PF07732 Multicopper oxidase 52 162 2.0E-40 T 26-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 3 608 3.2E-299 T 26-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 ProSitePatterns PS00079 Multicopper oxidases signature 1. 586 606 - T 26-04-2016 IPR033138 Multicopper oxidases, conserved site PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 SUPERFAMILY SSF49503 165 380 1.16E-56 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS15280 14b77ce7b431ef297814a68840f9f6ee 614 SUPERFAMILY SSF49503 46 184 4.6E-39 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 Gene3D G3DSA:3.90.550.10 9 196 7.5E-47 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 PANTHER PTHR19136 1 197 1.2E-52 T 26-04-2016 PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 SUPERFAMILY SSF53448 8 189 7.77E-30 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 Pfam PF12804 MobA-like NTP transferase domain 12 165 1.5E-31 T 26-04-2016 IPR025877 MobA-like NTP transferase PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 PANTHER PTHR19136:SF81 1 197 1.2E-52 T 26-04-2016 PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 9 191 9.8E-59 T 26-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PAM18_RS09920 0452ed6af940d325eddaa765779f384e 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 194 25.757 T 26-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 SUPERFAMILY SSF51905 2 164 1.5E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 SUPERFAMILY SSF51905 260 362 1.5E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 2.6E-21 T 26-04-2016 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 2.6E-21 T 26-04-2016 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 2.6E-21 T 26-04-2016 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 2.6E-21 T 26-04-2016 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 Gene3D G3DSA:3.50.50.60 3 167 8.4E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 Gene3D G3DSA:3.50.50.60 271 306 8.4E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 Pfam PF01494 FAD binding domain 2 306 8.4E-21 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PANTHER PTHR13789:SF202 1 369 6.9E-177 T 26-04-2016 PAM18_RS12355 ca04e70806122da4bc79bb714bcdf284 382 PANTHER PTHR13789 1 369 6.9E-177 T 26-04-2016 PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 Pfam PF08402 TOBE domain 276 345 1.8E-10 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 PANTHER PTHR24220:SF282 8 264 1.3E-131 T 26-04-2016 PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 SMART SM00382 31 213 2.2E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 SUPERFAMILY SSF52540 7 242 6.69E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 PANTHER PTHR24220 8 264 1.3E-131 T 26-04-2016 PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 SUPERFAMILY SSF50331 250 345 7.82E-12 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 Gene3D G3DSA:3.40.50.300 4 237 2.4E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07455 573a632998da21258f0e4c8af79fc30a 360 Pfam PF00005 ABC transporter 23 164 3.8E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.357.10 79 198 1.5E-38 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF46689 2 70 9.23E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 PANTHER PTHR30055 1 202 7.7E-83 T 26-04-2016 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF48498 81 195 4.79E-27 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.10.60 2 68 2.5E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13160 070842849ebf986bca6cbf2194bdbd6b 204 PANTHER PTHR30055:SF34 1 202 7.7E-83 T 26-04-2016 PAM18_RS06850 c9499a37fc43ec20a247cae95285a04b 115 Pfam PF05866 Endodeoxyribonuclease RusA 7 97 7.8E-17 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS06850 c9499a37fc43ec20a247cae95285a04b 115 Gene3D G3DSA:3.30.1330.70 1 114 3.0E-32 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS06850 c9499a37fc43ec20a247cae95285a04b 115 PIRSF PIRSF001007 1 115 1.2E-38 T 26-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 PAM18_RS06850 c9499a37fc43ec20a247cae95285a04b 115 SUPERFAMILY SSF103084 1 113 6.15E-26 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS27415 da240b3e0c5d9583556f997737eb00e3 222 PIRSF PIRSF006320 2 217 2.5E-108 T 26-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 PAM18_RS27415 da240b3e0c5d9583556f997737eb00e3 222 Pfam PF01965 DJ-1/PfpI family 16 190 2.5E-9 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS27415 da240b3e0c5d9583556f997737eb00e3 222 Gene3D G3DSA:3.40.50.880 1 220 1.4E-105 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS27415 da240b3e0c5d9583556f997737eb00e3 222 SUPERFAMILY SSF52317 3 217 1.36E-66 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS27415 da240b3e0c5d9583556f997737eb00e3 222 PANTHER PTHR10224 1 221 4.3E-134 T 26-04-2016 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 PANTHER PTHR36999 1 741 0.0 T 26-04-2016 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 SUPERFAMILY SSF53659 5 740 0.0 T 26-04-2016 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 Gene3D G3DSA:3.40.718.10 186 287 3.5E-30 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 Gene3D G3DSA:3.40.718.10 339 362 3.5E-30 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 Gene3D G3DSA:3.40.718.10 538 645 3.5E-30 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 PIRSF PIRSF009407 1 741 0.0 T 26-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 26-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PAM18_RS12075 74e238a0e4c3604ba80f98a0ce2cc804 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 740 0.0 T 26-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 SMART SM00283 95 351 3.5E-5 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 164 314 2.7E-28 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 PANTHER PTHR32089 149 306 9.1E-36 T 26-04-2016 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 SUPERFAMILY SSF58104 88 334 3.27E-37 T 26-04-2016 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 Gene3D G3DSA:1.10.287.950 146 315 1.1E-36 T 26-04-2016 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 224 253 1.4E-16 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS00910 d78f14f846fa0f12665578b573b90d4f 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 222 1.4E-16 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 Pfam PF04115 Ureidoglycolate lyase 2 158 2.8E-53 T 26-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 PIRSF PIRSF017306 2 162 1.3E-49 T 26-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 SUPERFAMILY SSF51182 1 162 3.47E-58 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 PANTHER PTHR21221 1 169 3.1E-111 T 26-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 Gene3D G3DSA:2.60.120.480 2 165 4.9E-61 T 26-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 PANTHER PTHR21221:SF2 1 169 3.1E-111 T 26-04-2016 PAM18_RS18515 2257b730ccedd69223f7343a2ebcfa78 169 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 163 42.469 T 26-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 2.1E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 PANTHER PTHR30614:SF5 1 225 4.2E-149 T 26-04-2016 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 SUPERFAMILY SSF161098 22 214 2.22E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 114 4.0E-13 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 Gene3D G3DSA:1.10.3720.10 24 223 9.9E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14550 7548f7bbbe123beadc910c35aab761c5 225 PANTHER PTHR30614 1 225 4.2E-149 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 PANTHER PTHR11615 9 702 1.4E-276 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 PANTHER PTHR11615:SF125 9 702 1.4E-276 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Gene3D G3DSA:2.20.25.90 4 66 7.5E-14 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Pfam PF01568 Molydopterin dinucleotide binding domain 576 694 1.1E-25 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Gene3D G3DSA:2.40.40.20 571 700 4.5E-28 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 2.6E-5 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Gene3D G3DSA:3.40.228.10 151 328 6.1E-46 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 SUPERFAMILY SSF53706 6 621 7.72E-129 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 SMART SM00926 3 62 4.4E-9 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Gene3D G3DSA:3.40.50.740 67 142 7.1E-54 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Gene3D G3DSA:3.40.50.740 329 552 7.1E-54 T 26-04-2016 PAM18_RS07475 56b61b48e98f7b085b40207a9c59d9a8 702 Pfam PF00384 Molybdopterin oxidoreductase 65 482 4.0E-35 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 Gene3D G3DSA:3.40.1130.10 66 190 6.4E-5 T 26-04-2016 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 PANTHER PTHR10983:SF15 4 301 3.6E-149 T 26-04-2016 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 SUPERFAMILY SSF69593 58 288 3.79E-36 T 26-04-2016 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 Pfam PF01553 Acyltransferase 76 221 3.0E-14 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 PANTHER PTHR10983 4 301 3.6E-149 T 26-04-2016 PAM18_RS21480 eb9903c94b36b1c75648455a9ba61d98 304 SMART SM00563 89 231 1.2E-15 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 SMART SM01134 73 232 4.9E-63 T 26-04-2016 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 SMART SM00420 6 58 9.2E-16 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 PANTHER PTHR30363:SF14 1 254 1.7E-167 T 26-04-2016 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 Gene3D G3DSA:1.10.10.10 5 56 9.4E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 PANTHER PTHR30363 1 254 1.7E-167 T 26-04-2016 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 SUPERFAMILY SSF100950 75 232 4.71E-26 T 26-04-2016 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 SUPERFAMILY SSF46785 4 77 2.25E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.3E-9 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.3E-9 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 26-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.5E-17 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.3E-47 T 26-04-2016 IPR014036 DeoR C-terminal sensor domain PAM18_RS18635 0e4b145d825a2c058febe7712c316d76 258 Gene3D G3DSA:3.40.50.1360 75 215 5.1E-11 T 26-04-2016 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 78 147 6.7E-25 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 PANTHER PTHR22617 17 156 4.3E-37 T 26-04-2016 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 Gene3D G3DSA:2.30.330.10 72 157 1.1E-37 T 26-04-2016 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 93 2.6E-28 T 26-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 94 110 2.6E-28 T 26-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 123 2.6E-28 T 26-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 123 138 2.6E-28 T 26-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 SUPERFAMILY SSF101801 74 155 1.2E-25 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS18865 6a3863419ff7d96e882de88b4e0339cb 157 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 74 149 3.3E-33 T 26-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 SUPERFAMILY SSF55347 179 486 4.58E-114 T 26-04-2016 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 485 6.7E-174 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 Gene3D G3DSA:3.30.360.10 184 485 5.2E-123 T 26-04-2016 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 26-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 Gene3D G3DSA:3.40.50.720 8 183 4.3E-54 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PANTHER PTHR23429 8 489 1.5E-219 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 1.7E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 1.7E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 1.7E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 1.7E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 1.7E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 487 89.891 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PIRSF PIRSF000110 2 488 3.6E-170 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 SUPERFAMILY SSF51735 7 187 2.9E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 PANTHER PTHR23429:SF0 8 489 1.5E-219 T 26-04-2016 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 485 1.6E-116 T 26-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS09170 909ee5acd5a5882de74c81a2c6532afe 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 184 1.5E-52 T 26-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 PANTHER PTHR30413 7 265 6.5E-103 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 PANTHER PTHR30413:SF8 7 265 6.5E-103 T 26-04-2016 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 4.6E-6 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 4.6E-6 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 35 56 4.6E-6 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS28485 edc540381de5edd97f110cf426d5b898 265 Pfam PF01061 ABC-2 type transporter 20 225 7.9E-29 T 26-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PAM18_RS23225 ea6704317e9c17d62d63c13d47b2e99c 265 PANTHER PTHR30188:SF4 2 263 1.6E-125 T 26-04-2016 PAM18_RS23225 ea6704317e9c17d62d63c13d47b2e99c 265 Pfam PF02405 Permease MlaE 49 260 3.4E-77 T 26-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PAM18_RS23225 ea6704317e9c17d62d63c13d47b2e99c 265 PANTHER PTHR30188 2 263 1.6E-125 T 26-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PAM18_RS23225 ea6704317e9c17d62d63c13d47b2e99c 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 15 262 8.8E-93 T 26-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 PANTHER PTHR18866 4 460 1.0E-237 T 26-04-2016 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF56059 85 334 1.04E-56 T 26-04-2016 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:3.90.226.10 843 1079 1.4E-58 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 PANTHER PTHR18866:SF103 4 460 1.0E-237 T 26-04-2016 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Pfam PF01039 Carboxyl transferase domain 605 1077 3.7E-71 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF52096 581 838 4.32E-48 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:3.90.226.10 595 833 6.4E-39 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:3.40.50.20 5 130 2.6E-43 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:3.30.1490.20 131 204 8.2E-20 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF51230 486 558 4.19E-15 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 514 531 - T 26-04-2016 IPR001882 Biotin-binding site PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF52440 4 114 1.8E-38 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF51246 338 457 6.28E-30 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:3.30.470.20 207 457 8.2E-82 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SUPERFAMILY SSF52096 807 1075 4.26E-66 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Pfam PF02785 Biotin carboxylase C-terminal domain 343 451 9.2E-29 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Gene3D G3DSA:2.40.50.100 493 562 4.4E-17 T 26-04-2016 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 327 1.3E-57 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 112 4.1E-39 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 SMART SM00878 343 451 4.5E-46 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS19080 f8bded685517b80564edafe6fd6552ad 1095 Pfam PF00364 Biotin-requiring enzyme 493 555 5.4E-12 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS06225 b19ec672c207732aca430c6f6ea042c0 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 17 106 3.5E-32 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS06225 b19ec672c207732aca430c6f6ea042c0 113 SUPERFAMILY SSF54534 2 108 1.28E-39 T 26-04-2016 PAM18_RS06225 b19ec672c207732aca430c6f6ea042c0 113 Gene3D G3DSA:3.10.50.40 2 109 1.0E-42 T 26-04-2016 PAM18_RS06225 b19ec672c207732aca430c6f6ea042c0 113 PANTHER PTHR10516 5 113 1.6E-46 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS17080 d05e6ebdcb8032cbabdf08406adc5882 140 Pfam PF05932 Tir chaperone protein (CesT) family 3 120 4.4E-28 T 26-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PAM18_RS17080 d05e6ebdcb8032cbabdf08406adc5882 140 Gene3D G3DSA:3.30.1460.10 2 124 2.8E-6 T 26-04-2016 PAM18_RS17080 d05e6ebdcb8032cbabdf08406adc5882 140 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 140 2.6E-58 T 26-04-2016 IPR013353 Type III secretion system chaperone YscB PAM18_RS17080 d05e6ebdcb8032cbabdf08406adc5882 140 SUPERFAMILY SSF69635 2 126 8.16E-41 T 26-04-2016 PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 Pfam PF13360 PQQ-like domain 91 321 8.6E-51 T 26-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 78 109 0.0015 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 203 234 180.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 333 364 220.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 158 189 3.7 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 117 149 0.04 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SMART SM00564 254 285 14.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 PANTHER PTHR32303 45 383 4.8E-77 T 26-04-2016 PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 PANTHER PTHR32303:SF8 45 383 4.8E-77 T 26-04-2016 PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 Gene3D G3DSA:2.140.10.10 21 394 8.8E-67 T 26-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 21 393 8.2E-140 T 26-04-2016 IPR017687 Outer membrane protein assembly factor BamB PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 17 395 39.532 T 26-04-2016 IPR017687 Outer membrane protein assembly factor BamB PAM18_RS05775 3d5b29b1f0b2c75536fca2a29f2de337 396 SUPERFAMILY SSF50998 45 385 1.79E-77 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.1080.10 12 221 2.5E-44 T 26-04-2016 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 3 222 3.84E-76 T 26-04-2016 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 4.7E-40 T 26-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 9.5E-231 T 26-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 PANTHER PTHR21432:SF10 1 494 4.7E-282 T 26-04-2016 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 225 494 2.76E-85 T 26-04-2016 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 215 1.3E-31 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.810.20 225 490 4.7E-80 T 26-04-2016 PAM18_RS28455 bad715f9e391bc6365745ba9f254e358 497 PANTHER PTHR21432 1 494 4.7E-282 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 26-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 PIRSF PIRSF000106 44 418 4.7E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 SUPERFAMILY SSF51735 162 412 1.26E-83 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 SMART SM01274 17 150 2.0E-76 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 Gene3D G3DSA:3.40.50.720 160 416 2.3E-85 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 SUPERFAMILY SSF53223 9 160 5.47E-51 T 26-04-2016 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 Pfam PF00390 Malic enzyme, N-terminal domain 19 148 1.7E-25 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 SMART SM00919 162 398 3.8E-144 T 26-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 354 3.4E-26 T 26-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 Gene3D G3DSA:3.40.50.10380 7 159 7.9E-49 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS26395 b2a01ec46b525157e7cf52c10b02762b 422 PANTHER PTHR23406 32 409 9.1E-169 T 26-04-2016 PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 8.3E-62 T 26-04-2016 PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PANTHER PTHR24322 157 188 2.0E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PANTHER PTHR24322 12 140 2.0E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 SUPERFAMILY SSF51735 6 246 1.8E-77 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 Gene3D G3DSA:3.40.50.720 3 247 2.8E-82 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04335 47b01ca01e4fb3d89f7c15e3c4b0336b 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 188 5.0E-5 T 26-04-2016 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 PANTHER PTHR24220:SF150 6 284 5.9E-145 T 26-04-2016 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 SUPERFAMILY SSF50331 241 347 6.8E-14 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 SMART SM00382 33 216 1.7E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 347 1.9E-107 T 26-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 Pfam PF08402 TOBE domain 274 347 4.8E-16 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 Pfam PF00005 ABC transporter 24 165 2.9E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 Gene3D G3DSA:3.40.50.300 3 241 4.0E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 PANTHER PTHR24220 6 284 5.9E-145 T 26-04-2016 PAM18_RS01635 2ae49ff6cfc3756a73a7b2e5c34e99cc 349 SUPERFAMILY SSF52540 5 245 4.98E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.565.10 808 977 5.0E-42 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.450.20 631 739 5.0E-10 T 26-04-2016 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:1.10.287.130 752 807 2.3E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PANTHER PTHR24423 27 45 2.3E-130 T 26-04-2016 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PANTHER PTHR24423 630 982 2.3E-130 T 26-04-2016 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00512 His Kinase A (phospho-acceptor) domain 757 819 2.0E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 633 748 6.0E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF47384 750 819 1.79E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00989 PAS fold 635 718 7.0E-6 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00091 632 700 3.2E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 902 916 2.69E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 951 2.69E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 974 2.69E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 930 2.69E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 865 975 1.7E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55785 623 716 5.33E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00388 756 822 1.1E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PANTHER PTHR24423:SF497 27 45 2.3E-130 T 26-04-2016 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 PANTHER PTHR24423:SF497 630 982 2.3E-130 T 26-04-2016 PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00387 865 977 1.2E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS24745 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55874 817 978 2.23E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 Gene3D G3DSA:1.10.10.10 15 95 3.5E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 Gene3D G3DSA:3.40.190.10 102 192 1.5E-16 T 26-04-2016 PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 76 1.1E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 Gene3D G3DSA:3.40.190.10 193 250 1.2E-5 T 26-04-2016 PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 PANTHER PTHR30579 10 297 9.2E-114 T 26-04-2016 PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 Pfam PF03466 LysR substrate binding domain 101 289 1.3E-30 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 PANTHER PTHR30579:SF0 10 297 9.2E-114 T 26-04-2016 PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 SUPERFAMILY SSF46785 10 123 1.15E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04805 442d88e94d59af6d3d7261a346721dc7 301 SUPERFAMILY SSF53850 101 293 2.95E-30 T 26-04-2016 PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF47616 77 200 6.0E-30 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 189 1.6E-11 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 PANTHER PTHR11260:SF143 1 193 9.6E-48 T 26-04-2016 PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:3.40.30.10 3 84 7.8E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:1.20.1050.10 85 199 1.9E-33 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 2.6E-16 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 PANTHER PTHR11260 1 193 9.6E-48 T 26-04-2016 PAM18_RS17385 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF52833 1 76 1.25E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 PANTHER PTHR11019:SF115 1 178 1.6E-75 T 26-04-2016 PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 SUPERFAMILY SSF52317 8 178 2.69E-43 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 Pfam PF01965 DJ-1/PfpI family 10 175 4.2E-45 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 177 3.2E-44 T 26-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 Gene3D G3DSA:3.40.50.880 2 179 1.1E-52 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS01790 8b65296bd7dd5cad772b95fa0213e665 179 PANTHER PTHR11019 1 178 1.6E-75 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SMART SM00271 4 62 5.7E-33 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 110 142 1.3E-22 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 213 256 1.3E-22 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF46565 1 111 2.88E-36 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00226 DnaJ domain 5 67 4.2E-28 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PANTHER PTHR24078:SF231 1 372 3.3E-175 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.10.230.10 143 212 1.9E-23 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PANTHER PTHR24078 1 372 3.3E-175 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 42 62 1.7E-33 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 7 25 1.7E-33 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 62 81 1.7E-33 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 25 40 1.7E-33 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00684 DnaJ central domain 149 209 3.6E-14 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 261 346 3.01E-22 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.81 T 26-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 215 269 6.8E-21 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 116 154 6.8E-21 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 26-04-2016 IPR018253 DnaJ domain, conserved site PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF57938 136 213 3.79E-22 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 258 335 2.9E-23 T 26-04-2016 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF01556 DnaJ C terminal domain 123 335 1.7E-44 T 26-04-2016 IPR002939 Chaperone DnaJ, C-terminal PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.1E-140 T 26-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PAM18_RS24930 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:1.10.287.110 1 103 1.6E-36 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 SUPERFAMILY SSF56014 351 446 1.57E-11 T 26-04-2016 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Gene3D G3DSA:3.30.413.10 351 442 5.7E-8 T 26-04-2016 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Gene3D G3DSA:3.30.413.10 103 240 1.1E-9 T 26-04-2016 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 PANTHER PTHR11493 10 446 7.3E-98 T 26-04-2016 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 32 88 1.2E-10 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 272 330 1.0E-14 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 102 244 3.4E-14 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 15 412 1.4E-112 T 26-04-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 SUPERFAMILY SSF55124 215 342 7.36E-24 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 SUPERFAMILY SSF56014 103 257 3.14E-20 T 26-04-2016 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 SUPERFAMILY SSF55124 9 93 3.11E-16 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Gene3D G3DSA:3.90.480.10 264 342 1.9E-30 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS10550 903dd7374e49dac7ef9f2a00313aa453 456 Gene3D G3DSA:3.90.480.10 28 96 1.9E-30 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 Gene3D G3DSA:3.30.230.10 6 114 2.2E-32 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 PANTHER PTHR33992 2 135 1.3E-39 T 26-04-2016 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 92 4.0E-38 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 17.822 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 Pfam PF00825 Ribonuclease P 6 113 1.7E-31 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 SUPERFAMILY SSF54211 6 115 3.54E-30 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 26-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 PAM18_RS29115 a1bf89af156543d94337ad46555302db 135 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 113 6.6E-27 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PAM18_RS14885 8a53c8588eb1da2d260d25c64c7acf98 79 Pfam PF02069 Prokaryotic metallothionein 5 49 4.3E-13 T 26-04-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PAM18_RS14885 8a53c8588eb1da2d260d25c64c7acf98 79 Gene3D G3DSA:2.30.170.10 1 50 5.6E-18 T 26-04-2016 PAM18_RS14885 8a53c8588eb1da2d260d25c64c7acf98 79 SUPERFAMILY SSF57868 5 50 8.0E-12 T 26-04-2016 IPR017854 Metallothionein domain GO:0046872 PAM18_RS14885 8a53c8588eb1da2d260d25c64c7acf98 79 ProDom PD019076 METALLOTHIONEIN METALLOTHIONEIN ZINC METAL-BINDING CADMIUM CLUSTER MT METAL-THIOLATE COPPER SMTA 6 49 2.0E-18 T 26-04-2016 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 1.4E-15 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 SUPERFAMILY SSF47616 78 205 2.56E-27 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 PANTHER PTHR11260:SF44 1 205 8.7E-117 T 26-04-2016 PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Gene3D G3DSA:1.20.1050.10 102 199 4.1E-15 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 SUPERFAMILY SSF52833 6 104 1.1E-22 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Gene3D G3DSA:3.40.30.10 5 101 1.6E-26 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 191 5.5E-8 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS23090 7a01069d7bd9ceaeff32e2fa4867ad9a 205 PANTHER PTHR11260 1 205 8.7E-117 T 26-04-2016 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 415 1.5E-23 T 26-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.1E-141 T 26-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.1E-50 T 26-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 9.1E-51 T 26-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 Gene3D G3DSA:3.40.50.720 182 358 3.4E-39 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 PANTHER PTHR21089 270 357 1.1E-143 T 26-04-2016 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 PANTHER PTHR21089 1 254 1.1E-143 T 26-04-2016 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 PIRSF PIRSF000445 1 422 1.1E-157 T 26-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69742 1 156 6.02E-49 T 26-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.249 T 26-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 PANTHER PTHR21089:SF3 270 357 1.1E-143 T 26-04-2016 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 PANTHER PTHR21089:SF3 1 254 1.1E-143 T 26-04-2016 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69075 315 416 1.7E-27 T 26-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 26-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS24335 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF51735 160 313 3.38E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09280 582a77b41052061335656296b4908213 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 26-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 Gene3D G3DSA:4.10.520.10 1 92 4.3E-35 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.813 T 26-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PAM18_RS09280 582a77b41052061335656296b4908213 94 SMART SM00411 1 91 7.5E-45 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.8E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.8E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.8E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 SUPERFAMILY SSF47729 1 92 3.68E-31 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS09280 582a77b41052061335656296b4908213 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 2.1E-54 T 26-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 PAM18_RS09280 582a77b41052061335656296b4908213 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.3E-29 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS24625 6e76954f8f69b128c04643028582135b 115 PIRSF PIRSF029688 1 115 7.0E-72 T 26-04-2016 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 PAM18_RS24625 6e76954f8f69b128c04643028582135b 115 SUPERFAMILY SSF141571 34 91 6.93E-12 T 26-04-2016 PAM18_RS24625 6e76954f8f69b128c04643028582135b 115 Pfam PF00805 Pentapeptide repeats (8 copies) 54 90 6.7E-10 T 26-04-2016 IPR001646 Pentapeptide repeat PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 Pfam PF03466 LysR substrate binding domain 90 293 8.8E-44 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 PANTHER PTHR30126:SF26 2 307 2.9E-156 T 26-04-2016 PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 Gene3D G3DSA:3.40.190.10 179 259 1.9E-12 T 26-04-2016 PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 SUPERFAMILY SSF46785 4 85 2.1E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 PANTHER PTHR30126 2 307 2.9E-156 T 26-04-2016 PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 Gene3D G3DSA:1.10.10.10 3 85 1.8E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 SUPERFAMILY SSF53850 91 296 4.5E-43 T 26-04-2016 PAM18_RS00805 40bcca9168d56d1133ea143662372d9e 312 Gene3D G3DSA:3.40.190.10 92 178 1.1E-19 T 26-04-2016 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 SUPERFAMILY SSF56954 4 102 1.2E-64 T 26-04-2016 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 SUPERFAMILY SSF56954 131 484 1.2E-64 T 26-04-2016 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 PANTHER PTHR30203 3 493 6.0E-198 T 26-04-2016 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 Pfam PF02321 Outer membrane efflux protein 51 270 1.4E-18 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 Pfam PF02321 Outer membrane efflux protein 294 480 4.6E-23 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 PANTHER PTHR30203:SF2 3 493 6.0E-198 T 26-04-2016 PAM18_RS23945 fae9f2a0c0cb8baaa7db6fcbac4992e1 493 Gene3D G3DSA:1.20.1600.10 44 481 1.8E-61 T 26-04-2016 PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 SMART SM00062 29 251 0.0032 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 PANTHER PTHR38834 1 250 3.4E-132 T 26-04-2016 PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 4.0E-19 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 PANTHER PTHR38834:SF1 1 250 3.4E-132 T 26-04-2016 PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 212 251 2.1E-12 T 26-04-2016 PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 31 120 2.1E-12 T 26-04-2016 PAM18_RS26850 70394b6f889b7968cce56619dac237e9 251 SUPERFAMILY SSF53850 30 250 5.25E-36 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 PANTHER PTHR11938:SF102 3 401 3.0E-83 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 Gene3D G3DSA:3.20.20.70 4 310 4.4E-80 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 319 7.5E-50 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 Pfam PF14697 4Fe-4S dicluster domain 338 400 7.4E-23 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 345 356 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 1.3E-27 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 SUPERFAMILY SSF51395 1 319 9.33E-76 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 Gene3D G3DSA:3.30.70.20 320 408 1.5E-15 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 PANTHER PTHR11938 3 401 3.0E-83 T 26-04-2016 PAM18_RS02220 532a4283a9c52c33331d9bab69702af4 424 SUPERFAMILY SSF54862 317 401 3.52E-13 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PANTHER PTHR26402:SF579 28 37 5.9E-26 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PANTHER PTHR26402:SF579 828 906 5.9E-26 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Pfam PF00196 Bacterial regulatory proteins, luxR family 845 896 6.5E-18 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 SUPERFAMILY SSF52540 30 260 1.03E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PANTHER PTHR26402 28 37 5.9E-26 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PANTHER PTHR26402 828 906 5.9E-26 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 SMART SM00421 841 898 2.7E-23 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Pfam PF13191 AAA ATPase domain 37 170 3.2E-10 T 26-04-2016 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:1.25.40.10 467 812 1.8E-13 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 SUPERFAMILY SSF46894 840 904 1.26E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 ProSitePatterns PS00622 LuxR-type HTH domain signature. 858 885 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:3.40.50.300 128 186 3.4E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:3.40.50.300 34 89 3.4E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 4.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 4.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 4.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16855 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:1.10.10.10 839 903 7.6E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 Gene3D G3DSA:3.40.190.10 231 272 8.1E-30 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 Gene3D G3DSA:3.40.190.10 34 122 8.1E-30 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 Gene3D G3DSA:3.40.190.10 123 230 1.7E-32 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 268 6.9E-51 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 PANTHER PTHR30085:SF2 1 295 5.3E-142 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 PANTHER PTHR30085 1 295 5.3E-142 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 SUPERFAMILY SSF53850 1 271 2.93E-66 T 26-04-2016 PAM18_RS26575 29045eec34b95bf2d0a0a614f2753231 299 SMART SM00062 37 270 1.7E-65 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 1.8E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 Gene3D G3DSA:2.170.130.10 35 181 6.2E-32 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 Gene3D G3DSA:2.40.170.20 184 732 1.5E-147 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 PANTHER PTHR32552:SF8 10 732 0.0 T 26-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 732 7.1E-111 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 Pfam PF00593 TonB dependent receptor 490 728 1.2E-34 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 PANTHER PTHR32552 10 732 0.0 T 26-04-2016 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 SUPERFAMILY SSF56935 35 732 7.12E-132 T 26-04-2016 PAM18_RS18335 b1735908e821e2299847ce40c8b1c5da 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 PIRSF PIRSF006105 3 162 2.7E-54 T 26-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 SUPERFAMILY SSF48695 44 153 6.55E-43 T 26-04-2016 IPR011031 Multihaem cytochrome PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 PANTHER PTHR38604:SF1 1 153 5.1E-70 T 26-04-2016 PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 Gene3D G3DSA:4.10.1020.10 66 133 7.8E-31 T 26-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 PANTHER PTHR38604 1 153 5.1E-70 T 26-04-2016 PAM18_RS19725 eb0ae3290d912ca15029afd4910ffcef 163 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 146 1.7E-45 T 26-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 Pfam PF04542 Sigma-70 region 2 18 88 4.3E-6 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 168 2.9E-15 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 Pfam PF08281 Sigma-70, region 4 119 170 4.3E-13 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 SUPERFAMILY SSF88659 114 175 3.05E-12 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 PANTHER PTHR30173 5 178 4.4E-39 T 26-04-2016 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 SUPERFAMILY SSF88946 8 108 6.67E-11 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 Gene3D G3DSA:1.10.1740.10 7 111 2.2E-9 T 26-04-2016 PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 Gene3D G3DSA:1.10.10.10 116 171 6.9E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25625 60eb0c6e4e1fc42f9ed9ac4a0210b912 178 PANTHER PTHR30173:SF9 5 178 4.4E-39 T 26-04-2016 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 SUPERFAMILY SSF55811 2 126 5.82E-39 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 Gene3D G3DSA:3.20.20.70 122 311 3.1E-38 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 PANTHER PTHR22769:SF35 2 187 1.3E-59 T 26-04-2016 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 PANTHER PTHR22769 2 187 1.3E-59 T 26-04-2016 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 2.4E-32 T 26-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 SUPERFAMILY SSF51391 114 311 7.72E-44 T 26-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 Gene3D G3DSA:3.90.79.10 3 121 3.1E-39 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 Pfam PF02581 Thiamine monophosphate synthase/TENI 132 309 1.3E-33 T 26-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS22950 e24de019767c0bf790460695e1404688 315 Pfam PF14815 NUDIX domain 8 124 9.0E-20 T 26-04-2016 IPR029119 MutY, C-terminal PAM18_RS22950 e24de019767c0bf790460695e1404688 315 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.0E-7 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS22950 e24de019767c0bf790460695e1404688 315 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.0E-7 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 PANTHER PTHR30456:SF0 5 248 2.9E-144 T 26-04-2016 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.4E-96 T 26-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 7.8E-102 T 26-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 Gene3D G3DSA:3.20.20.70 6 243 2.1E-107 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 SUPERFAMILY SSF63892 7 242 6.15E-97 T 26-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 246 127.795 T 26-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 PAM18_RS21775 776c6567f5fc3ebed3ded96b0f66c1a4 248 PANTHER PTHR30456 5 248 2.9E-144 T 26-04-2016 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 Pfam PF08241 Methyltransferase domain 62 155 2.1E-24 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 18 272 32.094 T 26-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 Gene3D G3DSA:3.40.50.150 22 194 3.6E-38 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 PANTHER PTHR10108 27 198 1.6E-45 T 26-04-2016 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 PANTHER PTHR10108:SF855 27 198 1.6E-45 T 26-04-2016 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 26 272 4.5E-70 T 26-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 PAM18_RS02545 d96b7102af583265de8d94577b31617c 274 SUPERFAMILY SSF53335 24 272 1.5E-41 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 3.5E-233 T 26-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 215 228 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 349 360 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 292 306 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 125 138 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 139 154 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 201 214 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 406 419 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 114 122 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 88 101 7.5E-48 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PANTHER PTHR11670:SF38 1 313 1.0E-281 T 26-04-2016 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PANTHER PTHR11670:SF38 333 472 1.0E-281 T 26-04-2016 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.40.1060.10 173 287 8.4E-40 T 26-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.10 323 473 4.1E-60 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.10 5 163 4.4E-21 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.578 T 26-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 1.3E-155 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 SUPERFAMILY SSF53732 2 472 2.49E-163 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PANTHER PTHR11670 1 313 1.0E-281 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 PANTHER PTHR11670 333 472 1.0E-281 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09460 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 174 274 4.6E-25 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PANTHER PTHR10209:SF68 4 105 6.5E-138 T 26-04-2016 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PANTHER PTHR10209 4 105 6.5E-138 T 26-04-2016 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 SUPERFAMILY SSF51197 3 314 6.87E-102 T 26-04-2016 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PANTHER PTHR10209 121 317 6.5E-138 T 26-04-2016 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 Gene3D G3DSA:2.60.120.330 3 315 6.6E-111 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PANTHER PTHR10209:SF68 121 317 6.5E-138 T 26-04-2016 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 4 128 4.6E-32 T 26-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PRINTS PR00682 Isopenicillin N synthase signature 149 165 6.2E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PRINTS PR00682 Isopenicillin N synthase signature 234 260 6.2E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS00745 b2fac67eacb30e25d2b99c33ee2dbd7d 320 PRINTS PR00682 Isopenicillin N synthase signature 27 44 6.2E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 2.0E-15 T 26-04-2016 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 PANTHER PTHR10986:SF12 2 117 4.9E-66 T 26-04-2016 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 Gene3D G3DSA:1.10.1900.20 55 117 1.2E-30 T 26-04-2016 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 SUPERFAMILY SSF74731 3 116 2.75E-49 T 26-04-2016 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.018 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 PANTHER PTHR10986 2 117 4.9E-66 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 Pfam PF00453 Ribosomal protein L20 3 109 7.6E-49 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-51 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.0E-40 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.0E-40 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.0E-40 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS11475 03c6f76219412bef5dc08bce94981067 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 SUPERFAMILY SSF47323 316 458 1.7E-41 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 PANTHER PTHR10890 2 460 1.3E-251 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.7E-30 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.7E-30 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.7E-30 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.7E-30 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 Gene3D G3DSA:3.40.50.620 20 305 1.7E-110 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 Pfam PF09190 DALR domain 340 401 7.9E-23 T 26-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 SMART SM00840 340 401 7.6E-27 T 26-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 2.7E-133 T 26-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 7.5E-177 T 26-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 SUPERFAMILY SSF52374 3 312 1.13E-101 T 26-04-2016 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.115 T 26-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 PAM18_RS16675 a416dbfcb4ad828fc01b79efa2940b1e 460 Gene3D G3DSA:1.20.120.640 306 391 1.2E-25 T 26-04-2016 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 SUPERFAMILY SSF52518 4 182 1.1E-44 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 318 2.8E-29 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 2.6E-41 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 PANTHER PTHR18968:SF12 1 572 0.0 T 26-04-2016 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Gene3D G3DSA:3.40.50.1220 184 340 1.0E-41 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 SUPERFAMILY SSF52467 181 346 3.45E-42 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Gene3D G3DSA:3.40.50.970 2 179 9.2E-51 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 PANTHER PTHR18968 1 572 0.0 T 26-04-2016 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.7E-36 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 SUPERFAMILY SSF52518 357 558 7.79E-56 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS27680 9f4e14a75d0c812ce67b652ff1da25c3 572 Gene3D G3DSA:3.40.50.970 350 548 3.4E-55 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 5.4E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 PANTHER PTHR26402 7 230 5.4E-100 T 26-04-2016 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 SMART SM00448 7 117 1.1E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 SUPERFAMILY SSF52172 8 131 4.13E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 Gene3D G3DSA:3.40.50.2300 8 125 1.5E-35 T 26-04-2016 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 PANTHER PTHR26402:SF292 7 230 5.4E-100 T 26-04-2016 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 SUPERFAMILY SSF46894 129 229 6.52E-27 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 SMART SM00862 152 228 9.4E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 Pfam PF00072 Response regulator receiver domain 9 117 3.0E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS16625 d2ff56a09eb1c8fd0db373b8abe17188 235 Gene3D G3DSA:1.10.10.10 130 230 9.0E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06400 61294fe6f498eeec62258550ac89d2a2 274 SUPERFAMILY SSF51621 5 268 3.86E-62 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS06400 61294fe6f498eeec62258550ac89d2a2 274 PANTHER PTHR21631:SF18 1 255 5.3E-96 T 26-04-2016 PAM18_RS06400 61294fe6f498eeec62258550ac89d2a2 274 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 252 2.2E-71 T 26-04-2016 PAM18_RS06400 61294fe6f498eeec62258550ac89d2a2 274 Gene3D G3DSA:3.20.20.60 2 233 1.8E-63 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS06400 61294fe6f498eeec62258550ac89d2a2 274 PANTHER PTHR21631 1 255 5.3E-96 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 SUPERFAMILY SSF82866 576 776 4.84E-36 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 PANTHER PTHR33406 1 102 2.3E-179 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 PANTHER PTHR33406 137 774 2.3E-179 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 Pfam PF03176 MMPL family 476 774 2.0E-27 T 26-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 SUPERFAMILY SSF82866 204 392 2.88E-25 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 PANTHER PTHR33406:SF2 1 102 2.3E-179 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 PANTHER PTHR33406:SF2 137 774 2.3E-179 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 Pfam PF02460 Patched family 174 305 1.1E-5 T 26-04-2016 IPR003392 Protein patched/dispatched GO:0016021 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 Gene3D G3DSA:1.20.1640.10 576 779 1.5E-30 T 26-04-2016 PAM18_RS09685 3b2f99c6b2b52071929342b04c6d67c2 790 Gene3D G3DSA:1.20.1640.10 197 400 7.0E-26 T 26-04-2016 PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 584 624 2.1E-6 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 295 330 2.5E-8 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 109 137 0.0011 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 253 294 9.7E-12 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 211 251 4.3E-7 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 58 97 6.6E-7 T 26-04-2016 IPR006530 YD repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 704 779 2.7E-25 T 26-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 PANTHER PTHR32305:SF6 51 780 1.5E-95 T 26-04-2016 PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 PANTHER PTHR32305 51 780 1.5E-95 T 26-04-2016 PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 253 289 6.6E-11 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 58 96 1.1E-7 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 232 269 1.2E-8 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 366 408 1.3E-5 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 105 137 8.0E-5 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 295 328 4.3E-8 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13265 d8313dd40cddea61acdd5b706ebe8b7e 781 Pfam PF05593 RHS Repeat 190 223 2.2E-5 T 26-04-2016 IPR031325 RHS repeat PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 PANTHER PTHR10996 1 369 1.5E-241 T 26-04-2016 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 SUPERFAMILY SSF51735 108 295 3.19E-52 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 26-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 Gene3D G3DSA:3.30.70.260 324 408 3.3E-26 T 26-04-2016 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 2.2E-47 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 Gene3D G3DSA:3.40.50.720 120 297 1.6E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 SUPERFAMILY SSF55021 334 408 2.18E-16 T 26-04-2016 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 SUPERFAMILY SSF52283 7 136 3.4E-51 T 26-04-2016 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 PANTHER PTHR10996:SF18 1 369 1.5E-241 T 26-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 Gene3D G3DSA:3.40.50.720 8 119 3.7E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01585 9deeaffbb2ecd64557a13d509f548150 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 PANTHER PTHR21139 1 249 2.5E-123 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 Pfam PF00121 Triosephosphate isomerase 5 246 1.6E-82 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.187 T 26-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.8E-66 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 Gene3D G3DSA:3.20.20.70 1 249 4.4E-96 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 26-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS24870 07cf39b60741969229bcbc36ef439cd2 251 SUPERFAMILY SSF51351 1 248 2.36E-86 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 ProSitePatterns PS00760 Signal peptidases I lysine active site. 83 95 - T 26-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 PANTHER PTHR12383 31 168 3.0E-57 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 Gene3D G3DSA:2.10.109.10 31 91 5.7E-42 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 Gene3D G3DSA:2.10.109.10 130 171 5.7E-42 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 ProSitePatterns PS00761 Signal peptidases I signature 3. 135 148 - T 26-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 Pfam PF00717 Peptidase S24-like 35 104 1.5E-18 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 PANTHER PTHR12383:SF14 31 168 3.0E-57 T 26-04-2016 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 SUPERFAMILY SSF51306 30 170 7.33E-55 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 26 169 9.0E-51 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.7E-20 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 2.7E-20 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS18430 15e8beaf452548345574353b507d16b7 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 2.7E-20 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 PANTHER PTHR32494:SF6 1 424 0.0 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 PANTHER PTHR32494 1 424 0.0 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 Gene3D G3DSA:3.40.630.10 13 233 1.2E-116 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 Gene3D G3DSA:3.40.630.10 359 417 1.2E-116 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 Pfam PF01546 Peptidase family M20/M25/M40 88 414 8.3E-39 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 PIRSF PIRSF001235 12 421 4.1E-135 T 26-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 Pfam PF07687 Peptidase dimerisation domain 220 321 2.1E-5 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 SUPERFAMILY SSF55031 221 336 1.44E-29 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 SUPERFAMILY SSF53187 6 231 1.59E-99 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 SUPERFAMILY SSF53187 344 415 1.59E-99 T 26-04-2016 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 415 1.6E-136 T 26-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 PAM18_RS02245 aca01cc2044225ec9b1e150c387f2d0f 427 Gene3D G3DSA:3.30.70.360 234 337 2.7E-37 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS10385 308624e93553fb15312ee9466132521b 536 PANTHER PTHR12147:SF23 6 444 6.4E-143 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 PANTHER PTHR12147:SF23 462 500 6.4E-143 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 PANTHER PTHR12147 6 444 6.4E-143 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 PANTHER PTHR12147 462 500 6.4E-143 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 Pfam PF04389 Peptidase family M28 277 489 9.1E-46 T 26-04-2016 IPR007484 Peptidase M28 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 Gene3D G3DSA:3.50.30.30 142 255 6.1E-20 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 SUPERFAMILY SSF52025 117 239 3.79E-15 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 SUPERFAMILY SSF53187 261 495 1.0E-62 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 SUPERFAMILY SSF53187 70 111 1.0E-62 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 Gene3D G3DSA:3.40.630.10 63 122 1.9E-70 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 Gene3D G3DSA:3.40.630.10 276 493 1.9E-70 T 26-04-2016 PAM18_RS10385 308624e93553fb15312ee9466132521b 536 Pfam PF02225 PA domain 155 253 6.3E-16 T 26-04-2016 IPR003137 PA domain PAM18_RS02265 4d9cd728755daac3b0f188308e08b76f 134 Pfam PF03061 Thioesterase superfamily 17 92 1.6E-13 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS02265 4d9cd728755daac3b0f188308e08b76f 134 SUPERFAMILY SSF54637 4 123 8.57E-24 T 26-04-2016 IPR029069 HotDog domain PAM18_RS02265 4d9cd728755daac3b0f188308e08b76f 134 PANTHER PTHR11049 1 133 6.9E-68 T 26-04-2016 PAM18_RS02265 4d9cd728755daac3b0f188308e08b76f 134 Gene3D G3DSA:3.10.129.10 3 118 4.7E-23 T 26-04-2016 IPR029069 HotDog domain PAM18_RS02265 4d9cd728755daac3b0f188308e08b76f 134 PANTHER PTHR11049:SF13 1 133 6.9E-68 T 26-04-2016 PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 PANTHER PTHR30267 1 640 4.1E-291 T 26-04-2016 PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 PANTHER PTHR30267:SF2 1 640 4.1E-291 T 26-04-2016 PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Gene3D G3DSA:3.40.50.300 75 154 1.1E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Gene3D G3DSA:3.40.50.300 239 325 1.1E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SUPERFAMILY SSF52540 75 343 1.05E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SMART SM00763 19 376 6.7E-221 T 26-04-2016 IPR013153 PrkA AAA domain PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF08298 PrkA AAA domain 20 376 1.4E-180 T 26-04-2016 IPR013153 PrkA AAA domain PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 7.2E-76 T 26-04-2016 IPR010650 PrkA C-terminal domain PAM18_RS02980 685ebc3fd602a78c3aaeadb4d83ee3fa 640 PIRSF PIRSF000549 1 640 1.0E-288 T 26-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 PANTHER PTHR33540:SF1 23 337 1.9E-173 T 26-04-2016 PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 PANTHER PTHR33540 23 337 1.9E-173 T 26-04-2016 PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 Gene3D G3DSA:3.30.200.20 4 103 4.5E-32 T 26-04-2016 PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 Pfam PF01636 Phosphotransferase enzyme family 37 259 4.5E-35 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 Gene3D G3DSA:3.90.1200.10 104 334 5.2E-69 T 26-04-2016 PAM18_RS03020 b6554d583a6741487f93ff17cdbdd205 338 SUPERFAMILY SSF56112 26 318 1.53E-54 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 SUPERFAMILY SSF51182 58 180 5.15E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 Gene3D G3DSA:1.10.260.40 7 104 5.0E-24 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 SUPERFAMILY SSF47413 2 70 2.68E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 Gene3D G3DSA:2.60.120.10 105 181 6.2E-6 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 PANTHER PTHR10245:SF21 3 182 2.1E-84 T 26-04-2016 PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 PANTHER PTHR10245 3 182 2.1E-84 T 26-04-2016 PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 SMART SM00530 10 65 7.7E-15 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS16180 3e1f705d4edcc525088f65254ca3284e 183 Pfam PF01381 Helix-turn-helix 11 65 4.4E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS17645 152be02a15e266ec35a48dfc60e656ce 301 SUPERFAMILY SSF53850 51 266 2.28E-19 T 26-04-2016 PAM18_RS17645 152be02a15e266ec35a48dfc60e656ce 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 136 265 8.0E-8 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 Gene3D G3DSA:3.30.470.10 8 130 1.7E-40 T 26-04-2016 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.7E-146 T 26-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 Gene3D G3DSA:3.20.10.10 134 295 1.3E-57 T 26-04-2016 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 SUPERFAMILY SSF56752 1 303 2.88E-104 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 PANTHER PTHR11825:SF7 1 305 7.9E-128 T 26-04-2016 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 26-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 Pfam PF01063 Amino-transferase class IV 36 267 1.4E-54 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS26230 34791fc7b1fd4444b5594dec1aea2846 307 PANTHER PTHR11825 1 305 7.9E-128 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF51206 18 157 4.32E-31 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:1.10.10.10 165 239 6.2E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00100 25 146 1.4E-19 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 26-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF46785 161 239 3.11E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00325 Bacterial regulatory proteins, crp family 188 219 9.6E-17 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00027 Cyclic nucleotide-binding domain 45 129 4.5E-16 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:2.60.120.10 14 164 1.2E-33 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 9.9E-12 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 9.9E-12 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00419 182 230 3.6E-16 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 PANTHER PTHR24567:SF28 12 239 1.4E-106 T 26-04-2016 PAM18_RS17955 cbf5001cdb797fd5836264fd1665a83d 244 PANTHER PTHR24567 12 239 1.4E-106 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441:SF2 1 500 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441:SF2 921 993 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441:SF2 530 868 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Pfam PF00691 OmpA family 907 946 1.8E-4 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 SUPERFAMILY SSF103088 904 945 1.7E-5 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 140 291 3.4E-33 T 26-04-2016 IPR008023 Protein of unknown function DUF748 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 692 837 3.9E-41 T 26-04-2016 IPR008023 Protein of unknown function DUF748 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 476 627 7.0E-32 T 26-04-2016 IPR008023 Protein of unknown function DUF748 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441 1 500 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441 921 993 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 PANTHER PTHR30441 530 868 1.1E-289 T 26-04-2016 PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Gene3D G3DSA:3.30.1330.60 1033 1064 2.1E-10 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS24795 4e27a7b53397bc0eaecb4da7b7738721 1088 Gene3D G3DSA:3.30.1330.60 904 947 2.1E-10 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 SUPERFAMILY SSF53850 23 259 3.09E-85 T 26-04-2016 PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 PANTHER PTHR30429:SF0 1 259 3.3E-140 T 26-04-2016 PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 PIRSF PIRSF002854 1 259 2.7E-103 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 PANTHER PTHR30429 1 259 3.3E-140 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 Pfam PF03180 NLPA lipoprotein 25 259 1.4E-101 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS05125 07f6fee32a9a5d3658dd021560cd7ecf 259 Gene3D G3DSA:3.40.190.10 22 150 1.9E-52 T 26-04-2016 PAM18_RS01605 1699e44a26ba6e3a41fae41f9473aec7 116 PANTHER PTHR36571:SF1 3 116 4.1E-48 T 26-04-2016 PAM18_RS01605 1699e44a26ba6e3a41fae41f9473aec7 116 Pfam PF04076 Bacterial OB fold (BOF) protein 19 113 1.1E-35 T 26-04-2016 IPR005220 Bacterial OB-fold PAM18_RS01605 1699e44a26ba6e3a41fae41f9473aec7 116 PANTHER PTHR36571 3 116 4.1E-48 T 26-04-2016 PAM18_RS01605 1699e44a26ba6e3a41fae41f9473aec7 116 Gene3D G3DSA:2.40.50.200 10 116 6.5E-33 T 26-04-2016 IPR005220 Bacterial OB-fold PAM18_RS01605 1699e44a26ba6e3a41fae41f9473aec7 116 SUPERFAMILY SSF101756 12 114 1.7E-29 T 26-04-2016 IPR005220 Bacterial OB-fold PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.300 148 321 2.2E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 PANTHER PTHR32071 1 478 1.3E-237 T 26-04-2016 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00382 169 334 7.6E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00448 2 109 6.2E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00158 Sigma-54 interaction domain 149 315 3.1E-73 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.2300 1 120 9.8E-31 T 26-04-2016 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52540 148 390 1.74E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00072 Response regulator receiver domain 4 109 2.0E-21 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52172 1 194 3.98E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 PANTHER PTHR32071:SF18 1 478 1.3E-237 T 26-04-2016 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS24750 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:1.10.8.60 322 391 4.1E-23 T 26-04-2016 PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 PANTHER PTHR30258:SF3 31 401 2.0E-122 T 26-04-2016 PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 SUPERFAMILY SSF52540 68 373 4.95E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 Pfam PF00437 Type II/IV secretion system protein 92 368 1.4E-92 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 PANTHER PTHR30258 31 401 2.0E-122 T 26-04-2016 PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.40.50.300 194 403 2.4E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22445 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.30.450.90 88 185 2.3E-36 T 26-04-2016 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 Gene3D G3DSA:1.10.10.610 1 72 4.1E-28 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 3.2E-25 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 63 3.0E-30 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 PIRSF PIRSF006169 1 75 2.8E-29 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 SUPERFAMILY SSF118001 1 74 3.79E-26 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS07725 a179578addc1280a43e92590a28eb4ab 76 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 69 24.212 T 26-04-2016 IPR010648 Uncharacterised protein family UPF0270 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PANTHER PTHR32063 1 1040 0.0 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 40 141 2.0E-30 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 136 182 1.07E-24 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 268 324 1.07E-24 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.20.1640.10 285 496 4.8E-57 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 290 490 2.22E-48 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 708 791 3.14E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.0E-78 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 666 706 6.28E-10 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 556 653 3.4E-16 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 PANTHER PTHR32063:SF21 1 1040 0.0 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 40 133 6.02E-24 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 816 1015 3.79E-44 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 709 791 6.9E-19 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 183 265 1.2E-14 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 183 266 3.27E-14 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 793 836 6.28E-10 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.10.3850.10 798 1015 4.9E-53 T 26-04-2016 PAM18_RS12945 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 559 648 5.0E-9 T 26-04-2016 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 445 2.3E-204 T 26-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 PANTHER PTHR37839 1 445 1.5E-226 T 26-04-2016 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 9.9E-112 T 26-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 Pfam PF11973 NQRA C-terminal domain 260 309 1.1E-21 T 26-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 PANTHER PTHR37839:SF1 1 445 1.5E-226 T 26-04-2016 PAM18_RS10075 61914fc1cb1ee6c90bd82a37cbc710d6 445 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 445 46.121 T 26-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 Pfam PF00535 Glycosyl transferase family 2 31 173 7.4E-7 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 Gene3D G3DSA:3.90.550.10 55 218 5.0E-11 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 PANTHER PTHR22916:SF29 1 317 9.7E-13 T 26-04-2016 PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 PANTHER PTHR22916 1 317 9.7E-13 T 26-04-2016 PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 11 291 1.3E-118 T 26-04-2016 IPR006446 Rhamnosyltransferase KEGG: 00540+2.4.-.-|UniPathway: UPA00030 PAM18_RS19930 05fe6bebbb4b19464a51530e31c9a888 325 SUPERFAMILY SSF53448 9 280 5.25E-23 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 26-04-2016 IPR030470 UbiA prenyltransferase conserved site PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 PANTHER PTHR11048 7 296 7.2E-99 T 26-04-2016 PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 Pfam PF01040 UbiA prenyltransferase family 34 278 3.8E-66 T 26-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 18 293 3.3E-106 T 26-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 PANTHER PTHR11048:SF7 7 296 7.2E-99 T 26-04-2016 PAM18_RS27985 ee0e499ff39fe65004aca2b261247af0 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 30.446 T 26-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 7.3E-111 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 1 120 3.14E-29 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 PIRSF PIRSF000804 1 367 2.9E-125 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 126 249 8.4E-39 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 1.6E-39 T 26-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 PANTHER PTHR30478 2 367 7.5E-148 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 1 120 3.2E-34 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 246 367 7.25E-38 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 SMART SM00480 17 363 1.3E-163 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 4.1E-41 T 26-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 250 367 1.2E-38 T 26-04-2016 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 8.1E-42 T 26-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS00010 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 126 245 3.14E-31 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PANTHER PTHR24093 8 792 0.0 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF81653 289 386 3.79E-26 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 ProSitePatterns PS01229 Hypothetical cof family signature 2. 685 707 - T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:2.70.150.10 245 387 3.1E-28 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Pfam PF00122 E1-E2 ATPase 258 477 3.1E-68 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF81665 734 762 1.05E-15 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF81665 387 480 1.05E-15 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF81665 257 286 1.05E-15 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 765 1.4E-86 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Pfam PF00403 Heavy-metal-associated domain 12 69 7.5E-16 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Pfam PF00403 Heavy-metal-associated domain 77 136 2.5E-15 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 76 137 5.8E-11 T 26-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 70 6.3E-9 T 26-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 26-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 26-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:3.30.70.100 6 70 2.8E-22 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 276 294 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 206 225 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 469 484 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 89 103 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 256 275 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 409 423 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00943 Copper-transporting ATPase signature 662 679 4.8E-13 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:3.40.1110.10 502 612 8.4E-15 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 685 704 6.9E-23 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 500 6.9E-23 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 6.9E-23 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 642 6.9E-23 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 720 6.9E-23 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:3.30.70.100 75 141 1.3E-25 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF55008 6 71 4.71E-18 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:3.40.50.1000 457 501 1.4E-53 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Gene3D G3DSA:3.40.50.1000 613 753 1.4E-53 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 202 788 3.3E-179 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF55008 75 145 2.09E-20 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 484 699 5.7E-42 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF56784 540 785 1.43E-59 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 SUPERFAMILY SSF56784 485 504 1.43E-59 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 PANTHER PTHR24093:SF332 8 792 0.0 T 26-04-2016 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 787 9.2E-192 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS05180 52287a5323214f2a9fca42d94249452c 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 488 494 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 SUPERFAMILY SSF51735 159 315 1.67E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 Pfam PF13823 Alcohol dehydrogenase GroES-associated 11 28 2.5E-6 T 26-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 PANTHER PTHR11695:SF38 22 361 3.3E-128 T 26-04-2016 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 Pfam PF00107 Zinc-binding dehydrogenase 194 320 3.7E-27 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 SMART SM00829 18 359 1.4E-4 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 Gene3D G3DSA:3.40.50.720 186 304 1.2E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 PANTHER PTHR11695 22 361 3.3E-128 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 80 94 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 Gene3D G3DSA:3.90.180.10 6 185 6.1E-55 T 26-04-2016 IPR011032 GroES-like PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 151 2.8E-32 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS04005 4bc641ddbe27c6c96b47f54f6eb8fde0 363 SUPERFAMILY SSF50129 9 192 5.63E-51 T 26-04-2016 IPR011032 GroES-like PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 SUPERFAMILY SSF53187 297 378 8.0E-52 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 SUPERFAMILY SSF53187 6 176 8.0E-52 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 Gene3D G3DSA:3.30.70.360 186 287 2.4E-25 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 PANTHER PTHR11014:SF75 6 382 1.2E-204 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 PANTHER PTHR11014 6 382 1.2E-204 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 3.3E-111 T 26-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 Pfam PF01546 Peptidase family M20/M25/M40 73 375 1.7E-31 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 SUPERFAMILY SSF55031 177 291 2.69E-22 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 Gene3D G3DSA:3.40.630.10 319 378 2.4E-55 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 Gene3D G3DSA:3.40.630.10 8 185 2.4E-55 T 26-04-2016 PAM18_RS27220 16c03411f7c5402da2c70191f03265ea 384 Pfam PF07687 Peptidase dimerisation domain 175 284 2.1E-26 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 PANTHER PTHR11695 17 353 8.7E-171 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 Gene3D G3DSA:3.90.180.10 4 181 1.9E-63 T 26-04-2016 IPR011032 GroES-like PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 Gene3D G3DSA:3.40.50.720 182 294 2.3E-24 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 SUPERFAMILY SSF50129 13 173 2.2E-50 T 26-04-2016 IPR011032 GroES-like PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 PANTHER PTHR11695:SF261 17 353 8.7E-171 T 26-04-2016 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 SMART SM00829 14 344 1.7E-4 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 145 2.2E-26 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 Pfam PF00107 Zinc-binding dehydrogenase 187 310 5.4E-23 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS14210 03c31d252a6dc182623e4b18017e36c7 353 SUPERFAMILY SSF51735 150 314 3.26E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF000124 1 436 9.0E-146 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:1.20.5.100 204 234 1.3E-12 T 26-04-2016 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF48179 204 300 7.48E-28 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF500135 1 436 1.8E-249 T 26-04-2016 IPR028358 GDP-mannose 6-dehydrogenase GO:0042121|GO:0047919 KEGG: 00040+1.1.1.13|KEGG: 00051+1.1.1.132|KEGG: 00520+1.1.1.132|MetaCyc: PWY-6073|MetaCyc: PWY-6082|UniPathway: UPA00286 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 235 430 3.7E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 410 3.2E-131 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 298 1.1E-28 T 26-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF52413 305 434 2.62E-25 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 405 2.0E-12 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 190 3.0E-66 T 26-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 SMART SM00984 317 425 2.2E-19 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 PANTHER PTHR11374 1 408 5.9E-269 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 PANTHER PTHR11374:SF22 1 408 5.9E-269 T 26-04-2016 PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF51735 1 195 2.91E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07445 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 1 194 1.8E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 Gene3D G3DSA:1.10.10.60 9 62 2.2E-21 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 SUPERFAMILY SSF46689 7 82 4.14E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 3.4E-14 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 PANTHER PTHR30055 2 199 1.4E-108 T 26-04-2016 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 PANTHER PTHR30055:SF38 2 199 1.4E-108 T 26-04-2016 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.4E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.4E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06205 dcfc40db2507b41364d610725fdb5bc9 213 Gene3D G3DSA:1.10.357.10 63 198 3.0E-23 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 SUPERFAMILY SSF46955 1 111 1.61E-24 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 SMART SM00422 1 69 3.0E-20 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.7E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.7E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.7E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 Gene3D G3DSA:1.10.1660.10 1 54 2.1E-20 T 26-04-2016 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 Gene3D G3DSA:1.10.1660.10 55 132 2.5E-9 T 26-04-2016 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 PANTHER PTHR30204:SF30 1 151 1.5E-74 T 26-04-2016 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.8E-15 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11590 8e1104726b62531f1efb9b4277fbcba9 162 PANTHER PTHR30204 1 151 1.5E-74 T 26-04-2016 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1155 23.41 T 26-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 PANTHER PTHR18937 1 1157 0.0 T 26-04-2016 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SUPERFAMILY SSF52540 955 1156 7.5E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SUPERFAMILY SSF52540 817 857 7.5E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SUPERFAMILY SSF52540 773 787 7.5E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 PIRSF PIRSF005719 1 1162 9.1E-268 T 26-04-2016 IPR024704 Structural maintenance of chromosomes protein PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1146 4.7E-68 T 26-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 1 187 1.2E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 754 809 1.6E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 1046 1158 1.6E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 545 578 1.2E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 845 868 1.6E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 Gene3D G3DSA:3.40.50.300 452 475 1.2E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SMART SM00968 520 615 3.1E-11 T 26-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 PANTHER PTHR18937:SF261 1 1157 0.0 T 26-04-2016 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1153 0.0 T 26-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SUPERFAMILY SSF52540 451 578 8.68E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18040 2c45061ee0e92522f98935f8160ed71c 1162 SUPERFAMILY SSF52540 1 210 8.68E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 ProSitePatterns PS00885 EPSP synthase signature 2. 652 670 - T 26-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF48179 189 295 9.98E-35 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 PANTHER PTHR21090:SF5 318 741 4.8E-181 T 26-04-2016 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF55205 316 738 3.11E-133 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Pfam PF02153 Prephenate dehydrogenase 29 285 1.5E-73 T 26-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.65.10.10 333 541 3.4E-65 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.65.10.10 542 739 5.9E-53 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 321 740 33.596 T 26-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 325 738 2.6E-126 T 26-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 SUPERFAMILY SSF51735 16 183 1.94E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 ProSitePatterns PS00104 EPSP synthase signature 1. 400 414 - T 26-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Gene3D G3DSA:3.40.50.720 7 193 5.9E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 PANTHER PTHR21090 318 741 4.8E-181 T 26-04-2016 PAM18_RS09265 22d9b83cdde750836feb2e3b88b61983 746 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 318 731 2.7E-119 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 SUPERFAMILY SSF103473 5 417 5.23E-86 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 PANTHER PTHR11662 5 418 5.4E-138 T 26-04-2016 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 222 420 1.6E-35 T 26-04-2016 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 PIRSF PIRSF002808 3 428 1.4E-35 T 26-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 PANTHER PTHR11662:SF3 5 418 5.4E-138 T 26-04-2016 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 Pfam PF07690 Major Facilitator Superfamily 18 375 3.3E-56 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS14275 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 12 205 3.6E-38 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF50447 271 411 5.52E-35 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SMART SM00889 487 612 1.3E-66 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54211 486 612 8.09E-37 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SMART SM00838 614 701 7.2E-55 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.6E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.6E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF03764 Elongation factor G, domain IV 486 611 7.4E-42 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF03144 Elongation factor Tu domain 2 331 398 7.0E-18 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:2.40.30.10 312 412 4.1E-38 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115:SF66 310 705 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115 310 705 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115 261 289 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 2.8E-65 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 705 0.0 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF52540 6 287 9.06E-104 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.230.10 491 612 5.0E-43 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115 3 184 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF14492 Elongation Factor G, domain II 411 485 1.9E-35 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54980 617 703 2.78E-29 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115:SF66 3 184 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 PANTHER PTHR23115:SF66 261 289 0.0 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 SUPERFAMILY SSF54980 411 488 1.22E-25 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.70.240 613 699 1.0E-31 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 5.1E-33 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.30.70.870 413 487 2.9E-40 T 26-04-2016 PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Gene3D G3DSA:3.40.50.300 6 293 7.9E-101 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Pfam PF00679 Elongation factor G C-terminus 615 699 1.2E-30 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS03410 def477d94a366c4df30b12f5fcfb5a61 706 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 108.058 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 Pfam PF13413 Helix-turn-helix domain 22 82 1.5E-21 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 PANTHER PTHR34475 5 347 1.8E-56 T 26-04-2016 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 Gene3D G3DSA:1.10.260.40 13 85 1.9E-10 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 Pfam PF13464 Domain of unknown function (DUF4115) 272 345 7.0E-24 T 26-04-2016 IPR025194 Domain of unknown function DUF4115 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 SUPERFAMILY SSF47413 17 86 3.85E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 32 58 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 PANTHER PTHR34475:SF1 5 347 1.8E-56 T 26-04-2016 PAM18_RS05755 d663f507962f31669dffbe7f4484572f 347 SMART SM00530 21 82 4.5E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SMART SM00387 365 473 3.3E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SMART SM00304 204 255 3.5E-5 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Gene3D G3DSA:3.30.450.20 88 174 1.4E-6 T 26-04-2016 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 2.1E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 PANTHER PTHR24423 198 464 1.1E-51 T 26-04-2016 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 PANTHER PTHR24423 4 17 1.1E-51 T 26-04-2016 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 PANTHER PTHR24423 66 133 1.1E-51 T 26-04-2016 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SUPERFAMILY SSF103190 79 179 2.86E-12 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SMART SM00388 255 320 3.4E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SUPERFAMILY SSF47384 241 319 2.75E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Gene3D G3DSA:1.10.287.130 257 305 8.0E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 SUPERFAMILY SSF55874 310 471 1.03E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Gene3D G3DSA:3.30.565.10 306 471 8.0E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Pfam PF00672 HAMP domain 185 251 2.1E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS02345 a9a12ca1f9e6f85b84b787e97ce0d3e1 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 462 5.8E-10 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 SMART SM00729 13 216 7.8E-12 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 PANTHER PTHR22960 4 282 1.4E-126 T 26-04-2016 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 4 329 40.501 T 26-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 Gene3D G3DSA:3.20.20.70 6 306 2.7E-72 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF04055 Radical SAM superfamily 18 177 6.6E-30 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 SUPERFAMILY SSF102114 5 280 1.57E-74 T 26-04-2016 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF13353 4Fe-4S single cluster domain 20 108 6.7E-8 T 26-04-2016 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 312 3.1E-38 T 26-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 1.1E-111 T 26-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05440 016fcd2c3fb6f303c1f15860b5e371cb 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 26-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 PIRSF PIRSF000429 1 425 2.7E-99 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 PANTHER PTHR18919:SF5 2 425 2.7E-184 T 26-04-2016 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 SUPERFAMILY SSF53901 7 282 1.43E-54 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Pfam PF00108 Thiolase, N-terminal domain 7 275 3.4E-46 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 SUPERFAMILY SSF53901 302 425 5.51E-28 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Gene3D G3DSA:3.40.47.10 213 287 6.0E-47 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Gene3D G3DSA:3.40.47.10 7 126 6.0E-47 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Gene3D G3DSA:3.40.47.10 169 212 4.1E-42 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Gene3D G3DSA:3.40.47.10 292 424 4.1E-42 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 PANTHER PTHR18919 2 425 2.7E-184 T 26-04-2016 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 Pfam PF02803 Thiolase, C-terminal domain 302 425 1.3E-29 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS25060 ed8e79ddfd288d5afa86e29155910ed7 425 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 424 1.9E-112 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 PANTHER PTHR11092 1 302 2.0E-148 T 26-04-2016 IPR010099 Epimerase family protein SDR39U1 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 Gene3D G3DSA:3.40.50.720 1 199 1.2E-19 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 5.8E-110 T 26-04-2016 IPR010099 Epimerase family protein SDR39U1 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 SUPERFAMILY SSF51735 1 301 3.68E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 1.9E-20 T 26-04-2016 IPR013549 Domain of unknown function DUF1731 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 2.5E-25 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 Gene3D G3DSA:3.90.25.10 200 248 4.8E-7 T 26-04-2016 PAM18_RS24285 65cda2ebd75a9ee30e15ab8b065fb3ba 305 PANTHER PTHR11092:SF0 1 302 2.0E-148 T 26-04-2016 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PANTHER PTHR11751 133 156 4.9E-24 T 26-04-2016 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PANTHER PTHR11751 20 87 4.9E-24 T 26-04-2016 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PANTHER PTHR11751:SF333 133 156 4.9E-24 T 26-04-2016 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PANTHER PTHR11751:SF333 20 87 4.9E-24 T 26-04-2016 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 SUPERFAMILY SSF64288 72 247 2.98E-44 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 Pfam PF07702 UTRA domain 106 240 3.3E-34 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.9E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.9E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 SMART SM00866 104 240 1.6E-33 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 SMART SM00345 25 84 5.8E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 84 9.1E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 SUPERFAMILY SSF46785 16 87 1.13E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 Gene3D G3DSA:3.40.1410.10 81 246 2.5E-43 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS06020 d5ec1c0b4a39812aa2b306e0628f342f 247 Gene3D G3DSA:1.10.10.10 15 80 1.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 SUPERFAMILY SSF56954 3 466 5.75E-104 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 PANTHER PTHR30203 8 467 8.0E-179 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Gene3D G3DSA:2.20.200.10 314 349 8.8E-23 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Gene3D G3DSA:2.20.200.10 99 140 8.8E-23 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 PANTHER PTHR30203:SF15 8 467 8.0E-179 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Gene3D G3DSA:1.20.1600.10 53 89 7.5E-88 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Gene3D G3DSA:1.20.1600.10 351 465 7.5E-88 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Gene3D G3DSA:1.20.1600.10 141 313 7.5E-88 T 26-04-2016 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 464 4.2E-117 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Pfam PF02321 Outer membrane efflux protein 64 253 1.3E-19 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS23975 28fe6c266f4094b5ad536d08bc5f29a8 479 Pfam PF02321 Outer membrane efflux protein 282 462 2.4E-32 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS04200 a5a1a4cc3fe2f4937533e78ff5db19d7 169 PANTHER PTHR23091:SF274 1 135 1.3E-18 T 26-04-2016 PAM18_RS04200 a5a1a4cc3fe2f4937533e78ff5db19d7 169 PANTHER PTHR23091 1 135 1.3E-18 T 26-04-2016 PAM18_RS04200 a5a1a4cc3fe2f4937533e78ff5db19d7 169 Gene3D G3DSA:3.40.630.30 1 136 3.4E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS04200 a5a1a4cc3fe2f4937533e78ff5db19d7 169 Pfam PF00583 Acetyltransferase (GNAT) family 52 128 2.5E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS04200 a5a1a4cc3fe2f4937533e78ff5db19d7 169 SUPERFAMILY SSF55729 2 144 2.87E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 3.5E-23 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Pfam PF00501 AMP-binding enzyme 41 443 3.0E-73 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Gene3D G3DSA:2.30.38.10 363 437 2.3E-9 T 26-04-2016 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Gene3D G3DSA:3.40.50.980 41 199 1.3E-34 T 26-04-2016 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 PANTHER PTHR24095 28 543 2.2E-172 T 26-04-2016 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Gene3D G3DSA:3.30.300.30 438 539 9.6E-31 T 26-04-2016 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 Gene3D G3DSA:3.40.50.980 200 359 1.4E-28 T 26-04-2016 PAM18_RS12800 eaa42a146edd793746f2f393e9612141 555 SUPERFAMILY SSF56801 28 543 1.15E-139 T 26-04-2016 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649:SF37 259 609 1.0E-286 T 26-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649:SF37 4 150 1.0E-286 T 26-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649:SF37 656 723 1.0E-286 T 26-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 SUPERFAMILY SSF52540 4 167 5.4E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 685 1.9E-209 T 26-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649 259 609 1.0E-286 T 26-04-2016 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649 4 150 1.0E-286 T 26-04-2016 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 PANTHER PTHR11649 656 723 1.0E-286 T 26-04-2016 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 Pfam PF07670 Nucleoside recognition 349 442 2.1E-13 T 26-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 Pfam PF07670 Nucleoside recognition 509 687 2.3E-36 T 26-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 Gene3D G3DSA:3.40.50.300 3 166 1.1E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 Pfam PF02421 Ferrous iron transport protein B 6 163 2.0E-62 T 26-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 PAM18_RS22730 412463311002d8d7abec78079f7a99fd 766 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 5.6E-22 T 26-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PAM18_RS06275 506c41551170c8d965f1b0ce4e28fb7a 171 SUPERFAMILY SSF50341 17 158 2.35E-25 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06275 506c41551170c8d965f1b0ce4e28fb7a 171 Pfam PF01584 CheW-like domain 17 155 8.7E-25 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06275 506c41551170c8d965f1b0ce4e28fb7a 171 PANTHER PTHR22617 17 169 4.4E-63 T 26-04-2016 PAM18_RS06275 506c41551170c8d965f1b0ce4e28fb7a 171 SMART SM00260 12 153 1.1E-10 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06275 506c41551170c8d965f1b0ce4e28fb7a 171 PANTHER PTHR22617:SF33 17 169 4.4E-63 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 SUPERFAMILY SSF69255 365 452 3.66E-35 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 Gene3D G3DSA:2.40.50.230 370 452 1.2E-42 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 2.2E-199 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 7.7E-207 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 529 552 4.9E-5 T 26-04-2016 IPR010609 Gp5, C-terminal PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 PANTHER PTHR32305:SF7 1 592 3.6E-277 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 SUPERFAMILY SSF69279 192 363 5.61E-35 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 SUPERFAMILY SSF69279 11 184 9.78E-63 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 SUPERFAMILY SSF69349 442 660 1.1E-55 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 Gene3D G3DSA:3.55.50.10 98 189 1.2E-38 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 4.9E-103 T 26-04-2016 PAM18_RS11755 2a538e3ed51beae497824f6e4156fc1a 689 PANTHER PTHR32305 1 592 3.6E-277 T 26-04-2016 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 PANTHER PTHR11545 1 142 6.1E-77 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 SUPERFAMILY SSF52161 1 139 2.49E-61 T 26-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 2.9E-66 T 26-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.956 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 26-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 Pfam PF00572 Ribosomal protein L13 15 138 9.8E-59 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 PIRSF PIRSF002181 1 142 2.3E-53 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PAM18_RS23115 53b6835ec36fc2082341824ff5d05432 142 Gene3D G3DSA:3.90.1180.10 3 141 6.1E-66 T 26-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 9.7E-129 T 26-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 PANTHER PTHR12544 1 302 6.0E-156 T 26-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 Gene3D G3DSA:3.40.710.10 1 302 8.7E-122 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 SUPERFAMILY SSF56601 1 302 4.38E-109 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 47.144 T 26-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 PAM18_RS17475 18bd32c94b7832943fa7cede502cb9bc 302 Pfam PF04960 Glutaminase 19 302 9.8E-112 T 26-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.90.180.10 18 133 2.2E-10 T 26-04-2016 IPR011032 GroES-like PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 PANTHER PTHR11695 19 330 1.9E-159 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 2.3E-138 T 26-04-2016 IPR014188 Acrylyl-CoA reductase AcuI PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 9.0E-6 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 PANTHER PTHR11695:SF13 19 330 1.9E-159 T 26-04-2016 IPR014188 Acrylyl-CoA reductase AcuI PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 Pfam PF00107 Zinc-binding dehydrogenase 162 271 2.7E-12 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.40.50.720 134 297 1.2E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF50129 8 147 2.59E-40 T 26-04-2016 IPR011032 GroES-like PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 SMART SM00829 15 327 1.5E-8 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS16450 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF51735 119 296 1.65E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 PANTHER PTHR30108:SF1 1 495 2.3E-186 T 26-04-2016 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 SUPERFAMILY SSF50475 7 314 1.61E-87 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 SUPERFAMILY SSF143968 317 493 9.42E-31 T 26-04-2016 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 13 429 1.7E-115 T 26-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 8 455 5.2E-90 T 26-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 Hamap MF_01983 UbiD-like decarboxylase. 4 493 50.977 T 26-04-2016 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 PANTHER PTHR30108 1 495 2.3E-186 T 26-04-2016 PAM18_RS01260 21369143e044efadfc2fa82e32848d4e 496 Gene3D G3DSA:3.40.1670.10 331 455 1.2E-14 T 26-04-2016 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 PANTHER PTHR22911:SF41 1 296 5.3E-141 T 26-04-2016 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 Pfam PF00892 EamA-like transporter family 8 141 3.2E-16 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 PANTHER PTHR22911 1 296 5.3E-141 T 26-04-2016 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 SUPERFAMILY SSF103481 47 145 4.05E-14 T 26-04-2016 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 SUPERFAMILY SSF103481 213 286 2.62E-7 T 26-04-2016 PAM18_RS02455 55c1d33ebcfbf7fbe19738fcaba4d231 298 TIGRFAM TIGR00688 rarD: protein RarD 8 260 1.9E-74 T 26-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF56059 82 346 1.1E-67 T 26-04-2016 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 443 5.1E-190 T 26-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF52440 1 112 7.91E-45 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.1E-42 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF51246 329 445 3.09E-43 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 5.7E-41 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 2.4E-73 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.30.1490.20 129 200 2.7E-27 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.40.50.20 2 128 5.7E-50 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.30.470.20 203 445 7.9E-95 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 PANTHER PTHR18866 1 468 0.0 T 26-04-2016 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 PANTHER PTHR18866:SF111 1 468 0.0 T 26-04-2016 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS28400 23417921b32004da26d70710c9d4dc01 471 SMART SM00878 334 440 1.2E-61 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 PANTHER PTHR34383:SF2 73 345 5.5E-219 T 26-04-2016 PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 Gene3D G3DSA:3.40.50.300 75 334 3.6E-110 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 89 316 6.5E-118 T 26-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 90 316 9.6E-112 T 26-04-2016 IPR022488 Polyphosphate kinase-2-related PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 PANTHER PTHR34383 73 345 5.5E-219 T 26-04-2016 PAM18_RS00715 883ffe355bc23682b35d45f01c0a9da9 357 SUPERFAMILY SSF52540 121 308 2.24E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 PANTHER PTHR30457 1 245 1.7E-87 T 26-04-2016 PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 Gene3D G3DSA:3.40.1210.10 1 245 7.9E-79 T 26-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 SUPERFAMILY SSF64167 1 246 4.05E-80 T 26-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 Pfam PF01975 Survival protein SurE 3 181 3.7E-53 T 26-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.8E-60 T 26-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PAM18_RS06685 7e8c75274b20cf78644806a1b57df0f9 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 38.027 T 26-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 PAM18_RS25725 d24b93efef5ae130d4a834392501f041 231 Gene3D G3DSA:1.10.10.10 143 216 1.3E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25725 d24b93efef5ae130d4a834392501f041 231 Gene3D G3DSA:3.90.79.10 6 138 2.9E-27 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS25725 d24b93efef5ae130d4a834392501f041 231 SUPERFAMILY SSF46785 151 217 2.58E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25725 d24b93efef5ae130d4a834392501f041 231 SUPERFAMILY SSF55811 9 144 7.07E-22 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 PANTHER PTHR23515 1 395 6.6E-241 T 26-04-2016 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 SUPERFAMILY SSF103473 6 390 9.16E-56 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 Pfam PF07690 Major Facilitator Superfamily 23 348 3.2E-38 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 Gene3D G3DSA:1.20.1250.20 12 195 4.8E-23 T 26-04-2016 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 Gene3D G3DSA:1.20.1250.20 203 378 8.4E-19 T 26-04-2016 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 PANTHER PTHR23515:SF4 1 395 6.6E-241 T 26-04-2016 PAM18_RS16735 c2a22e73fcd365ed4e27df1278bc8626 403 TIGRFAM TIGR00886 2A0108: nitrite transporter 13 347 2.7E-100 T 26-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 Gene3D G3DSA:1.10.287.130 233 305 2.2E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 460 7.2E-176 T 26-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 307 2.2E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SMART SM00388 243 309 6.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SMART SM00387 352 461 8.0E-19 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.0E-5 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 5.0E-5 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PANTHER PTHR24423 69 90 2.3E-142 T 26-04-2016 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PANTHER PTHR24423 183 462 2.3E-142 T 26-04-2016 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 Gene3D G3DSA:3.30.565.10 312 462 7.2E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SUPERFAMILY SSF55874 314 460 1.78E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SMART SM00304 189 242 7.6E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SUPERFAMILY SSF47384 226 307 1.51E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 SUPERFAMILY SSF158472 191 239 3.92E-5 T 26-04-2016 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PANTHER PTHR24423:SF354 69 90 2.3E-142 T 26-04-2016 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 PANTHER PTHR24423:SF354 183 462 2.3E-142 T 26-04-2016 PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 448 7.9E-12 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25575 b233a3f371b895cda2de725429e05696 463 Pfam PF00672 HAMP domain 170 238 1.1E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88659 197 282 3.18E-18 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.249 T 26-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 6.8E-18 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 6.8E-18 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 6.8E-18 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 6.8E-18 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04545 Sigma-70, region 4 229 279 1.4E-15 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 282 2.9E-124 T 26-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.10.601.10 16 123 4.3E-36 T 26-04-2016 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PANTHER PTHR30376 3 279 8.3E-119 T 26-04-2016 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 1.3E-31 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04542 Sigma-70 region 2 55 123 5.4E-16 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 41 6.1E-6 T 26-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.10.10.10 225 280 1.5E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01900 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88946 15 123 2.09E-39 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 Gene3D G3DSA:1.10.357.10 39 213 2.0E-25 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 SUPERFAMILY SSF46689 39 99 3.49E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 87 1.2E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 PANTHER PTHR30328:SF6 39 226 1.0E-38 T 26-04-2016 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 PANTHER PTHR30328 39 226 1.0E-38 T 26-04-2016 PAM18_RS21510 33b56355e38680447f4f394f490e297b 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 54 85 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 PANTHER PTHR11938:SF64 24 172 2.0E-81 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 184 41.126 T 26-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 SUPERFAMILY SSF54862 40 172 2.14E-28 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 PANTHER PTHR11938 24 172 2.0E-81 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 7.0E-87 T 26-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Gene3D G3DSA:3.30.70.20 119 168 2.4E-14 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Gene3D G3DSA:3.30.70.20 48 70 1.2E-4 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Gene3D G3DSA:3.30.70.20 106 118 1.2E-4 T 26-04-2016 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Pfam PF04060 Putative Fe-S cluster 44 75 4.4E-14 T 26-04-2016 IPR007202 4Fe-4S domain GO:0051536 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 PIRSF PIRSF005784 3 186 1.7E-84 T 26-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 113 124 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS07605 3af9ad26ae98cf80fc0a742aed7e4a82 188 Pfam PF14697 4Fe-4S dicluster domain 106 160 1.8E-17 T 26-04-2016 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 Gene3D G3DSA:3.40.50.720 2 164 1.2E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 SUPERFAMILY SSF48179 164 287 1.36E-39 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 PIRSF PIRSF000103 1 288 9.0E-69 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 3.0E-44 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 26-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 Gene3D G3DSA:1.10.1040.10 166 287 9.9E-41 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 SUPERFAMILY SSF51735 3 165 1.0E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 PANTHER PTHR22981:SF49 1 287 2.9E-168 T 26-04-2016 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 PANTHER PTHR22981 1 287 2.9E-168 T 26-04-2016 PAM18_RS17790 0e21edde1b76074976309f28d2540646 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 2.0E-34 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS27990 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 Pfam PF03640 Secreted repeat of unknown function 29 67 6.8E-14 T 26-04-2016 IPR005297 Lipoprotein repeat PAM18_RS27990 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 Pfam PF03640 Secreted repeat of unknown function 81 122 1.8E-19 T 26-04-2016 IPR005297 Lipoprotein repeat PAM18_RS27990 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 PIRSF PIRSF029720 1 124 5.6E-56 T 26-04-2016 IPR014558 Uncharacterised conserved lipoprotein PAM18_RS27990 04bf1e4cf56b72aa9b0f215f3d1e3ac7 127 PANTHER PTHR39335 1 127 3.1E-53 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Hamap MF_01973 Lon protease [lon]. 7 767 71.427 T 26-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 SUPERFAMILY SSF54211 590 765 4.55E-58 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 484 1.1E-18 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 SMART SM00382 344 488 9.3E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 TIGRFAM TIGR00763 lon: endopeptidase La 8 766 4.0E-302 T 26-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 SUPERFAMILY SSF88697 6 197 4.72E-49 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 SMART SM00464 6 198 5.2E-73 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Gene3D G3DSA:3.30.230.10 585 766 2.3E-75 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 2.5E-54 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 2.5E-54 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 2.5E-54 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 2.5E-54 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 2.5E-54 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Gene3D G3DSA:1.10.8.60 497 579 5.5E-32 T 26-04-2016 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 1.1E-97 T 26-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 SUPERFAMILY SSF52540 309 581 1.01E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 7.1E-42 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PANTHER PTHR10046 5 771 0.0 T 26-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 Gene3D G3DSA:3.40.50.300 303 496 4.3E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PIRSF PIRSF001174 1 770 0.0 T 26-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 PAM18_RS16605 8d563f55933a55517b47614e83b81989 798 PANTHER PTHR10046:SF43 5 771 0.0 T 26-04-2016 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 271 2.7E-109 T 26-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 PANTHER PTHR24220:SF374 45 271 3.3E-155 T 26-04-2016 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 PANTHER PTHR24220:SF374 10 20 3.3E-155 T 26-04-2016 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 PANTHER PTHR24220 45 271 3.3E-155 T 26-04-2016 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 PANTHER PTHR24220 10 20 3.3E-155 T 26-04-2016 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 SMART SM00382 57 245 3.8E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 Gene3D G3DSA:3.40.50.300 9 269 2.4E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 Pfam PF00005 ABC transporter 49 196 3.9E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS26630 ac590ca192071c3ebe0a05aff20e6c30 276 SUPERFAMILY SSF52540 47 270 1.65E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.90.25.10 178 295 1.5E-32 T 26-04-2016 PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 PANTHER PTHR10366 5 307 1.3E-103 T 26-04-2016 PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 SUPERFAMILY SSF51735 5 306 2.64E-90 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 3.8E-66 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 PANTHER PTHR10366:SF466 5 307 1.3E-103 T 26-04-2016 PAM18_RS04440 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.40.50.720 4 177 3.0E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 TIGRFAM TIGR03173 pbuX: xanthine permease 28 443 2.4E-128 T 26-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 Pfam PF00860 Permease family 25 410 3.7E-85 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 PANTHER PTHR11119:SF44 2 446 1.4E-238 T 26-04-2016 PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 PANTHER PTHR11119 2 446 1.4E-238 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 441 2.9E-112 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS00840 4c417f4d9cc6cf6c79e05789ee683d53 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 PANTHER PTHR11609:SF7 1 393 8.0E-226 T 26-04-2016 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 SUPERFAMILY SSF56059 120 386 1.33E-58 T 26-04-2016 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Gene3D G3DSA:3.30.1490.20 123 198 4.7E-27 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 PANTHER PTHR11609 1 393 8.0E-226 T 26-04-2016 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 9.0E-199 T 26-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Gene3D G3DSA:3.30.470.20 199 389 1.5E-72 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 SUPERFAMILY SSF52440 3 112 1.73E-34 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.6E-4 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Pfam PF02222 ATP-grasp domain 123 295 7.9E-55 T 26-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 53.597 T 26-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 PAM18_RS06050 9fa378e97ede5fcf2ff2a944db82fd7f 393 Gene3D G3DSA:3.40.50.20 5 120 3.2E-40 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 PANTHER PTHR13847:SF206 3 368 1.1E-132 T 26-04-2016 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 Gene3D G3DSA:3.50.50.60 326 367 4.3E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 Gene3D G3DSA:3.50.50.60 3 84 4.3E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 Gene3D G3DSA:3.50.50.60 136 220 4.3E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 Pfam PF01266 FAD dependent oxidoreductase 5 366 8.6E-66 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 SUPERFAMILY SSF51905 328 368 3.45E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 SUPERFAMILY SSF51905 4 222 3.45E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26900 634883553279b7c3ec7a4db72b233bd1 368 PANTHER PTHR13847 3 368 1.1E-132 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF53850 90 295 1.96E-43 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:1.10.10.10 3 87 2.4E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 Pfam PF03466 LysR substrate binding domain 91 293 8.0E-43 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:3.40.190.10 92 177 9.5E-25 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:3.40.190.10 178 268 3.3E-20 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 PANTHER PTHR30419 1 297 1.6E-180 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.7E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 PANTHER PTHR30419:SF2 1 297 1.6E-180 T 26-04-2016 PAM18_RS21260 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF46785 1 113 6.31E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 Gene3D G3DSA:3.10.20.30 215 315 1.0E-27 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 SUPERFAMILY SSF52343 102 221 2.62E-28 T 26-04-2016 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 Gene3D G3DSA:2.40.30.10 2 96 1.8E-32 T 26-04-2016 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 48 62 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 48 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 72 86 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 7.8E-48 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 SUPERFAMILY SSF63380 2 96 1.96E-26 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PANTHER PTHR22924:SF20 1 273 1.3E-146 T 26-04-2016 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 PANTHER PTHR22924 1 273 1.3E-146 T 26-04-2016 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 SUPERFAMILY SSF54292 209 316 4.85E-30 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 307 5.3E-13 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS25670 d51f13fe807a6abcc88706d33a50a816 317 Gene3D G3DSA:3.40.50.80 99 214 2.0E-25 T 26-04-2016 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 PANTHER PTHR11986:SF81 34 451 4.0E-172 T 26-04-2016 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 Gene3D G3DSA:3.90.1150.10 343 446 1.1E-49 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 Gene3D G3DSA:3.90.1150.10 6 67 1.1E-49 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 Gene3D G3DSA:3.40.640.10 68 342 1.3E-82 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 Pfam PF00202 Aminotransferase class-III 32 442 8.3E-103 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 SUPERFAMILY SSF53383 7 445 3.13E-128 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS01495 a624b5990e55c25a1c21bc4a46492d37 452 PANTHER PTHR11986 34 451 4.0E-172 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 PANTHER PTHR12001 6 322 1.9E-113 T 26-04-2016 IPR017446 Polyprenyl synthetase-related PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 Pfam PF00348 Polyprenyl synthetase 31 273 1.1E-69 T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 PANTHER PTHR12001:SF47 6 322 1.9E-113 T 26-04-2016 PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 Gene3D G3DSA:1.10.600.10 4 321 1.7E-98 T 26-04-2016 IPR008949 Isoprenoid synthase domain PAM18_RS23825 698b80fc6400b24b19b8cd4096db5b4e 322 SUPERFAMILY SSF48576 5 321 1.12E-97 T 26-04-2016 IPR008949 Isoprenoid synthase domain PAM18_RS04665 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 TIGRFAM TIGR00908 2A0305: ethanolamine permease 26 470 7.2E-220 T 26-04-2016 IPR004757 Ethanolamine permease PAM18_RS04665 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 PANTHER PTHR11785 18 461 5.9E-176 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS04665 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 PANTHER PTHR11785:SF337 18 461 5.9E-176 T 26-04-2016 PAM18_RS04665 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 PIRSF PIRSF006060 11 479 4.9E-70 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS04665 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 Pfam PF13520 Amino acid permease 63 451 6.1E-40 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS10875 46e57232c7d0f4fa9489b9bc7f92ca82 448 SUPERFAMILY SSF51569 2 444 1.61E-205 T 26-04-2016 PAM18_RS10875 46e57232c7d0f4fa9489b9bc7f92ca82 448 PANTHER PTHR21337 3 448 0.0 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS10875 46e57232c7d0f4fa9489b9bc7f92ca82 448 Pfam PF01474 Class-II DAHP synthetase family 5 440 4.9E-208 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS10875 46e57232c7d0f4fa9489b9bc7f92ca82 448 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 6.0E-223 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 PANTHER PTHR33121 9 156 9.6E-45 T 26-04-2016 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 337 1.3E-42 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 PANTHER PTHR33121:SF7 9 156 9.6E-45 T 26-04-2016 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 SUPERFAMILY SSF55073 186 339 3.45E-45 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 Gene3D G3DSA:3.30.70.270 184 339 7.8E-53 T 26-04-2016 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 SMART SM00065 26 168 1.1E-9 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 SUPERFAMILY SSF55781 29 168 8.29E-26 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 Gene3D G3DSA:3.30.450.40 29 168 1.1E-12 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 Pfam PF01590 GAF domain 30 138 1.3E-10 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 339 4.9E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS11270 66320894fe7def414d8efb54c65a6ba6 341 SMART SM00267 170 341 3.0E-50 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 5.3E-12 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 Pfam PF00593 TonB dependent receptor 564 806 1.4E-29 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 SMART SM00965 55 105 3.0E-11 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 SUPERFAMILY SSF56935 108 808 2.01E-133 T 26-04-2016 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 PANTHER PTHR32552:SF17 138 808 1.1E-166 T 26-04-2016 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 PANTHER PTHR32552:SF17 52 118 1.1E-166 T 26-04-2016 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 Gene3D G3DSA:2.170.130.10 127 258 9.4E-39 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 251 7.6E-22 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 807 7.3E-118 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 PANTHER PTHR32552 138 808 1.1E-166 T 26-04-2016 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 PANTHER PTHR32552 52 118 1.1E-166 T 26-04-2016 PAM18_RS13595 3d642af196eb48aae59ec3e5e2272848 808 Gene3D G3DSA:2.40.170.20 265 808 9.6E-147 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 PANTHER PTHR11079 1 214 2.6E-64 T 26-04-2016 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 PANTHER PTHR11079 345 352 2.6E-64 T 26-04-2016 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 SUPERFAMILY SSF53927 5 146 7.03E-49 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 Gene3D G3DSA:3.40.430.10 131 368 4.1E-73 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 PIRSF PIRSF006769 1 370 9.8E-128 T 26-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 Gene3D G3DSA:3.40.140.10 5 130 5.4E-35 T 26-04-2016 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 PANTHER PTHR11079:SF10 1 214 2.6E-64 T 26-04-2016 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 PANTHER PTHR11079:SF10 345 352 2.6E-64 T 26-04-2016 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 364 7.2E-116 T 26-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 SUPERFAMILY SSF53597 147 365 1.68E-55 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 148 367 3.1E-53 T 26-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 Pfam PF01872 RibD C-terminal domain 149 363 4.6E-47 T 26-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PAM18_RS04500 4381b004d29ab88167721f09b541d1a3 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 101 1.2E-19 T 26-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 PAM18_RS24310 493af5a9a733defef804ddba05a91153 173 PIRSF PIRSF029681 1 173 9.5E-54 T 26-04-2016 IPR018550 Lipid A 3-O-deacylase-related PAM18_RS24310 493af5a9a733defef804ddba05a91153 173 SUPERFAMILY SSF56925 33 148 8.89E-6 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS24310 493af5a9a733defef804ddba05a91153 173 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 37 171 3.2E-27 T 26-04-2016 IPR018550 Lipid A 3-O-deacylase-related PAM18_RS24310 493af5a9a733defef804ddba05a91153 173 Gene3D G3DSA:2.40.160.20 25 172 3.5E-52 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Gene3D G3DSA:3.30.390.50 222 323 1.8E-36 T 26-04-2016 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 217 4.9E-50 T 26-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 SUPERFAMILY SSF55447 223 322 1.1E-27 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 SMART SM01092 224 322 3.8E-28 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 SUPERFAMILY SSF56176 1 217 8.72E-59 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 PANTHER PTHR11908 1 117 4.4E-154 T 26-04-2016 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 PANTHER PTHR11908 160 324 4.4E-154 T 26-04-2016 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Gene3D G3DSA:3.30.43.10 1 49 3.1E-18 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 225 322 1.4E-14 T 26-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 PANTHER PTHR11908:SF97 1 117 4.4E-154 T 26-04-2016 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 PANTHER PTHR11908:SF97 160 324 4.4E-154 T 26-04-2016 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Gene3D G3DSA:3.30.465.10 54 111 2.1E-32 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS15930 ee97b88166d3d5198b24933c68e60ab3 329 Gene3D G3DSA:3.30.465.10 155 217 2.1E-32 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 SUPERFAMILY SSF46589 1 112 6.28E-31 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 Gene3D G3DSA:1.10.287.40 1 104 3.2E-26 T 26-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PIRSF PIRSF001529 1 426 3.3E-180 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.1E-30 T 26-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 SUPERFAMILY SSF55681 116 423 1.97E-102 T 26-04-2016 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 41.29 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 402 4.4E-36 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 7.7E-34 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 7.7E-34 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 7.7E-34 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 7.7E-34 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 7.7E-34 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 PANTHER PTHR11778 1 425 2.5E-213 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 Gene3D G3DSA:3.30.930.10 105 423 7.5E-144 T 26-04-2016 PAM18_RS12135 3c71945172269c6c0838bc9eb64b9c77 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 4.6E-172 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PANTHER PTHR24093:SF50 89 803 1.4E-181 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 231 796 3.1E-139 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00941 Cadmium-transporting ATPase signature 376 392 4.7E-5 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00941 Cadmium-transporting ATPase signature 97 106 4.7E-5 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00941 Cadmium-transporting ATPase signature 108 129 4.7E-5 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Gene3D G3DSA:3.40.1110.10 524 595 3.9E-4 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 7 89 2.4E-28 T 26-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF55008 87 164 6.68E-17 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Gene3D G3DSA:3.30.70.100 91 160 1.2E-15 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 708 3.0E-33 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 796 1.5E-154 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Gene3D G3DSA:3.40.50.1000 481 523 1.1E-50 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Gene3D G3DSA:3.40.50.1000 614 762 1.1E-50 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF81665 262 309 4.71E-8 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF81665 411 501 4.71E-8 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF56784 558 794 3.17E-50 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF56784 506 526 3.17E-50 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 276 797 2.6E-113 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 ProSitePatterns PS01229 Hypothetical cof family signature 2. 694 716 - T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 284 772 3.2E-68 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Gene3D G3DSA:2.70.150.10 275 410 2.1E-21 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PANTHER PTHR24093 89 803 1.4E-181 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 5.0E-21 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 5.0E-21 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 5.0E-21 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 5.0E-21 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 5.0E-21 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 SUPERFAMILY SSF81653 323 409 3.4E-22 T 26-04-2016 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Pfam PF00403 Heavy-metal-associated domain 97 156 6.6E-9 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS17930 a80a039dc9a0af67edcdf36f3c4ff46b 811 Pfam PF00122 E1-E2 ATPase 281 499 6.9E-57 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 SUPERFAMILY SSF52540 7 219 5.19E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 Pfam PF00005 ABC transporter 23 162 7.9E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 PANTHER PTHR24220 5 210 1.2E-132 T 26-04-2016 PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 Gene3D G3DSA:3.40.50.300 4 210 4.6E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 SMART SM00382 32 213 1.1E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 PANTHER PTHR24220:SF564 5 210 1.2E-132 T 26-04-2016 PAM18_RS05095 de41023a100a46addbfda574f8be305b 263 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF46689 528 617 4.78E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF00158 Sigma-54 interaction domain 322 480 1.2E-61 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF55781 69 212 6.21E-10 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 PANTHER PTHR32071 321 619 4.5E-149 T 26-04-2016 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF02954 Bacterial regulatory protein, Fis family 579 615 4.1E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF01590 GAF domain 76 204 9.5E-7 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.40.50.300 322 490 1.7E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF52540 321 559 4.37E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 404 419 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.30.450.40 160 211 1.0E-5 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 529 538 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.8.60 492 565 4.6E-16 T 26-04-2016 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.10.60 579 613 4.2E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 SMART SM00382 337 481 1.4E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 341 354 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 598 618 3.3E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 581 598 3.3E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04035 2f0342e20e540c20322f2a1b2bcd9b0f 625 PANTHER PTHR32071:SF5 321 619 4.5E-149 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 Gene3D G3DSA:3.40.50.10170 1 167 2.9E-24 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 Gene3D G3DSA:3.30.1180.10 170 313 1.7E-21 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 PANTHER PTHR33434 1 318 2.4E-81 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 PANTHER PTHR33434:SF2 1 318 2.4E-81 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 SUPERFAMILY SSF82549 1 312 1.99E-47 T 26-04-2016 PAM18_RS21445 99400df89ddd0a12d4430b6e8378e565 319 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 313 1.0E-77 T 26-04-2016 IPR003797 DegV PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 PANTHER PTHR11935:SF106 1 234 9.2E-78 T 26-04-2016 PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 PANTHER PTHR11935 1 234 9.2E-78 T 26-04-2016 PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 Pfam PF00753 Metallo-beta-lactamase superfamily 29 220 5.4E-22 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 SUPERFAMILY SSF56281 15 233 2.52E-42 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 SMART SM00849 32 220 1.6E-32 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS19010 d120ecdbe8e66e70818c1afd0e40ca5f 242 Gene3D G3DSA:3.60.15.10 26 228 2.6E-34 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Gene3D G3DSA:3.90.480.10 321 403 1.2E-38 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Gene3D G3DSA:3.90.480.10 48 117 1.2E-38 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 PANTHER PTHR11493 327 551 3.9E-178 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 PANTHER PTHR11493 1 294 3.9E-178 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 SUPERFAMILY SSF56014 120 285 1.83E-47 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 PANTHER PTHR11493:SF47 327 551 3.9E-178 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 PANTHER PTHR11493:SF47 1 294 3.9E-178 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 SUPERFAMILY SSF55124 1 125 3.76E-30 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 547 2.4E-10 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 7.0E-41 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 4.5E-15 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 2.6E-17 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Gene3D G3DSA:3.30.413.10 120 275 2.3E-41 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 SUPERFAMILY SSF55124 315 421 1.39E-24 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 SUPERFAMILY SSF55124 252 276 1.39E-24 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 Gene3D G3DSA:3.30.413.10 408 548 3.1E-36 T 26-04-2016 PAM18_RS16425 d2ea65b881b9c092a474ab55bf811d84 552 SUPERFAMILY SSF56014 409 548 5.5E-38 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 PANTHER PTHR24567 144 265 8.9E-18 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 SMART SM00100 128 246 6.7E-19 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 1.8E-6 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 PRINTS PR00103 cAMP-dependent protein kinase signature 206 217 1.8E-6 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 PRINTS PR00103 cAMP-dependent protein kinase signature 194 203 1.8E-6 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 PRINTS PR00103 cAMP-dependent protein kinase signature 154 168 1.8E-6 T 26-04-2016 PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 Gene3D G3DSA:2.60.120.10 149 258 4.3E-29 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 160 176 - T 26-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 SUPERFAMILY SSF51206 151 259 3.4E-28 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS24635 cfb06cb95b5e0f1579cdbdb1aab29ac2 265 Pfam PF00027 Cyclic nucleotide-binding domain 152 234 1.1E-21 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS25025 80baf7e881ac3c87c455dc316ca5e1ec 188 PANTHER PTHR39166 1 182 5.0E-50 T 26-04-2016 PAM18_RS25025 80baf7e881ac3c87c455dc316ca5e1ec 188 Pfam PF06042 Nucleotidyltransferase 26 179 5.8E-52 T 26-04-2016 IPR009267 Putative nucleotidyltransferase PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 SUPERFAMILY SSF50249 39 118 1.94E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 PANTHER PTHR30001 1 485 1.2E-215 T 26-04-2016 PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 3.4E-160 T 26-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 SMART SM00316 37 113 3.5E-10 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 Gene3D G3DSA:2.40.50.140 30 119 1.7E-32 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF00575 S1 RNA binding domain 38 100 6.0E-8 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS23335 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF10150 Ribonuclease E/G family 115 389 4.8E-106 T 26-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 26-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 PANTHER PTHR11615 46 196 3.3E-90 T 26-04-2016 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:3.40.50.740 110 170 2.0E-13 T 26-04-2016 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:2.20.25.90 39 109 7.1E-25 T 26-04-2016 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 SUPERFAMILY SSF53706 37 196 3.4E-54 T 26-04-2016 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 7.4E-7 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 PANTHER PTHR11615:SF126 46 196 3.3E-90 T 26-04-2016 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 SMART SM00926 44 105 3.2E-22 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS25200 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 104 9.7E-19 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 Pfam PF01797 Transposase IS200 like 14 130 2.2E-7 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 SUPERFAMILY SSF143422 1 138 9.55E-36 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 PANTHER PTHR36966:SF1 1 177 1.7E-43 T 26-04-2016 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 SMART SM01321 9 132 6.8E-40 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 PANTHER PTHR36966 1 177 1.7E-43 T 26-04-2016 PAM18_RS19820 5c26fb3513c9c3bd4f2d000e9dd8450c 177 Gene3D G3DSA:3.30.70.1290 5 136 1.4E-16 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.40.50.300 2 25 8.6E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.40.50.300 85 199 8.6E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.0E-74 T 26-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 Pfam PF00625 Guanylate kinase 4 182 3.5E-54 T 26-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 PANTHER PTHR23117:SF13 1 197 3.0E-97 T 26-04-2016 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 SMART SM00072 2 184 9.5E-62 T 26-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 26-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 SUPERFAMILY SSF52540 3 186 1.63E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.30.63.10 32 84 1.1E-28 T 26-04-2016 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 PANTHER PTHR23117 1 197 3.0E-97 T 26-04-2016 PAM18_RS27875 7baf81fa66da5d662e0023e48a6072b6 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 36.599 T 26-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PAM18_RS27555 a4da2fca1acb873830c318ff6191ab46 950 PANTHER PTHR38760 17 872 0.0 T 26-04-2016 PAM18_RS27555 a4da2fca1acb873830c318ff6191ab46 950 Pfam PF01295 Adenylate cyclase, class-I 244 844 8.5E-120 T 26-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PAM18_RS27555 a4da2fca1acb873830c318ff6191ab46 950 Pfam PF12633 Adenylate cyclase NT domain 21 217 2.1E-71 T 26-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 PAM18_RS27555 a4da2fca1acb873830c318ff6191ab46 950 PIRSF PIRSF001444 16 931 0.0 T 26-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 PAM18_RS00955 fbecac973d9c44df413abd8ea5decd12 452 PANTHER PTHR34596 1 452 1.6E-163 T 26-04-2016 PAM18_RS00955 fbecac973d9c44df413abd8ea5decd12 452 Pfam PF03573 outer membrane porin, OprD family 29 450 4.8E-140 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS00955 fbecac973d9c44df413abd8ea5decd12 452 Gene3D G3DSA:2.40.160.10 33 452 1.9E-116 T 26-04-2016 IPR023614 Porin domain PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 115 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 Pfam PF14437 MafB19-like deaminase 31 174 3.1E-30 T 26-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 33 174 46.038 T 26-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 PANTHER PTHR11079:SF72 25 175 1.4E-48 T 26-04-2016 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 SUPERFAMILY SSF53927 27 178 3.68E-55 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 Gene3D G3DSA:3.40.140.10 25 172 2.6E-58 T 26-04-2016 PAM18_RS05970 1b2a69a9f96b1b0c2babce76c36bd8cd 183 PANTHER PTHR11079 25 175 1.4E-48 T 26-04-2016 PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 PANTHER PTHR24031 8 556 6.2E-200 T 26-04-2016 PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 SMART SM00487 25 223 1.2E-57 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF03880 DbpA RNA binding domain 483 551 4.7E-19 T 26-04-2016 IPR005580 DbpA, RNA-binding domain PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 SMART SM00490 259 340 7.1E-33 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 553 41.659 T 26-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF00270 DEAD/DEAH box helicase 31 193 2.9E-46 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 PANTHER PTHR24031:SF261 8 556 6.2E-200 T 26-04-2016 PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Pfam PF00271 Helicase conserved C-terminal domain 236 340 7.3E-30 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Gene3D G3DSA:3.40.50.300 207 374 4.9E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 Gene3D G3DSA:3.40.50.300 4 206 1.8E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10890 de6e6f069c4374046d13f83eca0d27b0 556 SUPERFAMILY SSF52540 74 361 3.81E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 PANTHER PTHR30570:SF5 17 321 2.0E-162 T 26-04-2016 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 Pfam PF12849 PBP superfamily domain 36 295 1.3E-33 T 26-04-2016 IPR024370 PBP domain PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 309 7.5E-97 T 26-04-2016 IPR011862 Phosphate binding protein GO:0006810 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 SUPERFAMILY SSF53850 37 320 9.86E-72 T 26-04-2016 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 PANTHER PTHR30570 17 321 2.0E-162 T 26-04-2016 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 123 266 6.3E-38 T 26-04-2016 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 267 317 4.7E-9 T 26-04-2016 PAM18_RS28040 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 43 120 4.7E-9 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 PANTHER PTHR30118 1 297 7.4E-148 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Gene3D G3DSA:1.10.10.10 2 87 2.0E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 PANTHER PTHR30118:SF7 1 297 7.4E-148 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 SUPERFAMILY SSF46785 4 85 9.46E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 SUPERFAMILY SSF53850 91 294 1.52E-43 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Gene3D G3DSA:3.40.190.10 174 268 1.8E-25 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Pfam PF03466 LysR substrate binding domain 95 295 7.5E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 3.6E-14 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Gene3D G3DSA:3.40.190.10 272 295 1.6E-33 T 26-04-2016 PAM18_RS19475 016d95e88eb7e2db3694144e990c0df2 297 Gene3D G3DSA:3.40.190.10 91 173 1.6E-33 T 26-04-2016 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 26-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PIRSF PIRSF038928 24 503 3.6E-174 T 26-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF06628 Catalase-related immune-responsive 436 495 3.3E-11 T 26-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PANTHER PTHR11465:SF3 25 495 0.0 T 26-04-2016 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 26-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 344 370 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 130 147 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 109 127 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 47 70 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 312 339 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 149 167 1.5E-66 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 SUPERFAMILY SSF56634 29 503 1.57E-186 T 26-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 SMART SM01060 34 414 2.6E-240 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF00199 Catalase 34 411 1.9E-163 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 Gene3D G3DSA:2.40.180.10 28 381 7.6E-165 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24055 4ce70b73173bf71848be4b223e781f2a 513 PANTHER PTHR11465 25 495 0.0 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 Gene3D G3DSA:3.40.50.300 368 390 5.4E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 Gene3D G3DSA:3.40.50.300 432 506 5.4E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 5.7E-157 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 510 1.4E-15 T 26-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 SUPERFAMILY SSF52540 1 217 9.03E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 Gene3D G3DSA:3.40.50.300 1 199 2.7E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 PIRSF PIRSF003128 1 558 4.7E-160 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 PANTHER PTHR11059 2 558 2.8E-176 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 Gene3D G3DSA:3.80.10.10 200 269 2.6E-5 T 26-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 SUPERFAMILY SSF52540 2 50 1.18E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24945 3af99207c1547ec99a031acef254af2c 558 SUPERFAMILY SSF52540 284 511 1.18E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 Pfam PF05977 Transmembrane secretion effector 6 523 8.7E-221 T 26-04-2016 IPR010290 Transmembrane secretion effector PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 Gene3D G3DSA:1.20.1250.20 14 198 2.3E-19 T 26-04-2016 PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 Gene3D G3DSA:1.20.1250.20 229 399 4.4E-19 T 26-04-2016 PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 SUPERFAMILY SSF103473 15 399 4.58E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 PANTHER PTHR23513:SF7 1 427 3.5E-169 T 26-04-2016 PAM18_RS11675 8c73713858736784c47ce46319ad6a82 529 PANTHER PTHR23513 1 427 3.5E-169 T 26-04-2016 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 SUPERFAMILY SSF52518 2 180 2.39E-53 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS19000 348323f0c50086a740194de9143766cc 533 SUPERFAMILY SSF52518 361 528 1.2E-44 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS19000 348323f0c50086a740194de9143766cc 533 PANTHER PTHR18968:SF13 1 528 1.4E-162 T 26-04-2016 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 525 1.3E-33 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 324 2.3E-26 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 SUPERFAMILY SSF52467 156 348 9.05E-37 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Gene3D G3DSA:3.40.50.1220 184 370 9.8E-35 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 1.1E-54 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Gene3D G3DSA:3.40.50.970 2 173 3.1E-59 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS19000 348323f0c50086a740194de9143766cc 533 PANTHER PTHR18968 1 528 1.4E-162 T 26-04-2016 PAM18_RS19000 348323f0c50086a740194de9143766cc 533 Gene3D G3DSA:3.40.50.970 371 526 2.2E-44 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 PANTHER PTHR30420 2 447 0.0 T 26-04-2016 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 PANTHER PTHR30420:SF2 2 447 0.0 T 26-04-2016 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 SUPERFAMILY SSF55909 3 446 6.38E-207 T 26-04-2016 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 Pfam PF04996 Succinylarginine dihydrolase 3 446 3.6E-225 T 26-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 4.4E-248 T 26-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 Gene3D G3DSA:3.75.10.20 1 447 9.7E-228 T 26-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PAM18_RS21150 d4b2485a238fd87251e652b370711864 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 60.684 T 26-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 PAM18_RS22490 4e519f1617ef3ca47ae28c5e3e280a0e 371 PANTHER PTHR12526 74 361 3.6E-46 T 26-04-2016 PAM18_RS22490 4e519f1617ef3ca47ae28c5e3e280a0e 371 Gene3D G3DSA:3.40.50.2000 165 334 1.4E-25 T 26-04-2016 PAM18_RS22490 4e519f1617ef3ca47ae28c5e3e280a0e 371 Pfam PF00534 Glycosyl transferases group 1 188 331 3.1E-20 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS22490 4e519f1617ef3ca47ae28c5e3e280a0e 371 SUPERFAMILY SSF53756 6 361 6.85E-64 T 26-04-2016 PAM18_RS22490 4e519f1617ef3ca47ae28c5e3e280a0e 371 Pfam PF13439 Glycosyltransferase Family 4 15 175 2.3E-21 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 PANTHER PTHR13693:SF53 5 392 9.8E-180 T 26-04-2016 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.276 T 26-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 SUPERFAMILY SSF53383 6 385 8.95E-110 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 378 4.6E-150 T 26-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 Gene3D G3DSA:3.40.640.10 55 269 1.5E-80 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 Gene3D G3DSA:3.90.1150.10 270 380 3.6E-34 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 PANTHER PTHR13693 5 392 9.8E-180 T 26-04-2016 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 26-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PAM18_RS02535 b5614723eb34348090cdbaa4f72b36bf 401 Pfam PF00155 Aminotransferase class I and II 39 378 2.2E-52 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 SUPERFAMILY SSF52540 335 562 2.36E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 PANTHER PTHR24220 310 461 1.0E-136 T 26-04-2016 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 PANTHER PTHR24220 8 234 1.0E-136 T 26-04-2016 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 PANTHER PTHR24220:SF0 310 461 1.0E-136 T 26-04-2016 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 PANTHER PTHR24220:SF0 8 234 1.0E-136 T 26-04-2016 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 SUPERFAMILY SSF52540 11 232 2.37E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 SMART SM00382 36 218 3.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 SMART SM00382 366 547 2.4E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 Pfam PF00005 ABC transporter 27 170 1.6E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 Pfam PF00005 ABC transporter 360 501 1.4E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 Gene3D G3DSA:3.40.50.300 335 565 1.8E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12300 3d08bbfca7f5b8903de9079456546a86 589 Gene3D G3DSA:3.40.50.300 7 234 1.2E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 Gene3D G3DSA:1.10.340.30 38 144 5.8E-28 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 PANTHER PTHR30037:SF3 174 206 1.9E-121 T 26-04-2016 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 PANTHER PTHR30037:SF3 1 156 1.9E-121 T 26-04-2016 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 SUPERFAMILY SSF48150 37 182 2.12E-39 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 Pfam PF03352 Methyladenine glycosylase 39 132 2.0E-18 T 26-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 PANTHER PTHR30037 174 206 1.9E-121 T 26-04-2016 PAM18_RS19625 7839cc5996764f382469e19b37e4a11a 223 PANTHER PTHR30037 1 156 1.9E-121 T 26-04-2016 PAM18_RS05345 e4ba4d3af2b595a13c763b8ff12e7d7d 240 PANTHER PTHR30151:SF23 16 236 2.6E-78 T 26-04-2016 PAM18_RS05345 e4ba4d3af2b595a13c763b8ff12e7d7d 240 PANTHER PTHR30151 16 236 2.6E-78 T 26-04-2016 PAM18_RS05345 e4ba4d3af2b595a13c763b8ff12e7d7d 240 SUPERFAMILY SSF161098 37 221 4.32E-33 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05345 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Gene3D G3DSA:1.10.3720.10 35 225 9.9E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05345 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 230 7.4E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 SMART SM00862 158 235 5.8E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 SUPERFAMILY SSF46894 154 235 1.22E-15 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 Pfam PF00072 Response regulator receiver domain 12 119 2.5E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 PANTHER PTHR26402:SF545 9 237 2.9E-141 T 26-04-2016 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 PANTHER PTHR26402 9 237 2.9E-141 T 26-04-2016 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 235 2.6E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 SUPERFAMILY SSF52172 7 178 3.13E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 SMART SM00448 9 119 8.4E-42 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 Gene3D G3DSA:3.40.50.2300 8 127 3.9E-37 T 26-04-2016 PAM18_RS20980 e0f0b849b3b68e708d81118eab7e5374 239 Gene3D G3DSA:1.10.10.10 145 237 8.7E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 PANTHER PTHR19211 307 529 1.4E-243 T 26-04-2016 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 PANTHER PTHR19211 7 290 1.4E-243 T 26-04-2016 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 PANTHER PTHR19211:SF6 307 529 1.4E-243 T 26-04-2016 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 PANTHER PTHR19211:SF6 7 290 1.4E-243 T 26-04-2016 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 Gene3D G3DSA:3.40.50.300 364 529 9.6E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 SMART SM00382 373 540 2.5E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 SMART SM00382 39 224 2.6E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 SUPERFAMILY SSF52540 13 239 9.16E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 Pfam PF00005 ABC transporter 41 180 2.6E-16 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 Pfam PF00005 ABC transporter 365 494 2.8E-16 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 Gene3D G3DSA:3.40.50.300 4 271 4.5E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18955 ab5654d3837a15ac7b6c8e4fcf9f1d6e 546 SUPERFAMILY SSF52540 364 528 1.0E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24070 90370a0a70a05a476a4a1f551f435c3d 332 PIRSF PIRSF006470 1 331 2.4E-117 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS24070 90370a0a70a05a476a4a1f551f435c3d 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 277 3.3E-65 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS24070 90370a0a70a05a476a4a1f551f435c3d 332 PANTHER PTHR33376 8 332 7.8E-162 T 26-04-2016 PAM18_RS24070 90370a0a70a05a476a4a1f551f435c3d 332 PANTHER PTHR33376:SF7 8 332 7.8E-162 T 26-04-2016 PAM18_RS24070 90370a0a70a05a476a4a1f551f435c3d 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 314 1.2E-95 T 26-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF46548 105 232 2.27E-38 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:1.10.1060.10 106 233 3.2E-47 T 26-04-2016 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 108 1.7E-30 T 26-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF54292 2 104 3.3E-26 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 PANTHER PTHR11921:SF29 1 232 2.2E-131 T 26-04-2016 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 3.9E-84 T 26-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 PANTHER PTHR11921 1 232 2.2E-131 T 26-04-2016 PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:3.10.20.30 2 104 1.4E-35 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS17745 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 6.7E-9 T 26-04-2016 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 329 7.1E-15 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 272 293 7.1E-15 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 418 7.1E-15 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 7.1E-15 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 Pfam PF13437 HlyD family secretion protein 261 389 1.1E-13 T 26-04-2016 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PANTHER PTHR30386 11 418 1.7E-131 T 26-04-2016 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 PANTHER PTHR30386:SF8 11 418 1.7E-131 T 26-04-2016 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.50.100 253 289 1.0E-13 T 26-04-2016 PAM18_RS04060 cb6c6ee3b325386b802d314621d060ad 418 Gene3D G3DSA:2.40.50.100 59 96 1.0E-13 T 26-04-2016 PAM18_RS09135 71c02ee7fa5fe8331e7af1cff528a6ea 420 SUPERFAMILY SSF53850 24 418 3.62E-64 T 26-04-2016 PAM18_RS09135 71c02ee7fa5fe8331e7af1cff528a6ea 420 Pfam PF01547 Bacterial extracellular solute-binding protein 43 322 1.8E-26 T 26-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 PAM18_RS09135 71c02ee7fa5fe8331e7af1cff528a6ea 420 Gene3D G3DSA:3.40.190.10 146 346 4.0E-30 T 26-04-2016 PAM18_RS09135 71c02ee7fa5fe8331e7af1cff528a6ea 420 PANTHER PTHR30061 1 420 6.2E-161 T 26-04-2016 PAM18_RS09135 71c02ee7fa5fe8331e7af1cff528a6ea 420 PANTHER PTHR30061:SF22 1 420 6.2E-161 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 942 22.865 T 26-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 SUPERFAMILY SSF52540 7 204 4.28E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 SUPERFAMILY SSF52540 456 571 4.28E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.40.50.300 823 943 4.3E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.40.50.300 603 676 4.3E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.40.50.300 3 89 2.3E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.40.50.300 480 599 2.3E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 927 0.0 T 26-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.30.1490.20 130 153 4.7E-29 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:3.30.1490.20 200 241 4.7E-29 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 SUPERFAMILY SSF52540 614 912 1.33E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:1.20.1580.10 91 129 3.9E-54 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:1.20.1580.10 409 479 3.9E-54 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:1.20.1580.10 254 287 3.9E-54 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:1.20.1580.10 696 822 2.0E-54 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 Gene3D G3DSA:1.10.8.280 289 408 2.9E-40 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 PANTHER PTHR32282:SF2 2 947 0.0 T 26-04-2016 PAM18_RS03570 500e8365f541db37f72b076c5ff36d6e 947 PANTHER PTHR32282 2 947 0.0 T 26-04-2016 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 SUPERFAMILY SSF55486 5 148 1.9E-46 T 26-04-2016 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 Pfam PF02130 Uncharacterized protein family UPF0054 19 142 4.4E-36 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 PANTHER PTHR22881 3 150 4.6E-57 T 26-04-2016 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 146 23.492 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 143 5.4E-35 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 26-04-2016 IPR020549 Endoribonuclease YbeY, conserved site PAM18_RS04865 fc7c53cb804c93ba4660b4303d73c0b9 160 Gene3D G3DSA:3.40.390.30 16 151 1.6E-48 T 26-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 PAM18_RS27215 b4f99a6368dadba5a090dc207f64b38d 233 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 214 4.9E-34 T 26-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PAM18_RS27215 b4f99a6368dadba5a090dc207f64b38d 233 Pfam PF01914 MarC family integral membrane protein 6 214 2.9E-50 T 26-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PAM18_RS27215 b4f99a6368dadba5a090dc207f64b38d 233 PANTHER PTHR33508:SF2 1 225 9.4E-142 T 26-04-2016 PAM18_RS27215 b4f99a6368dadba5a090dc207f64b38d 233 PANTHER PTHR33508 1 225 9.4E-142 T 26-04-2016 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.7E-25 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.3E-17 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 PANTHER PTHR10909:SF296 1 475 1.1E-280 T 26-04-2016 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.5E-11 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Gene3D G3DSA:2.40.110.10 160 266 2.1E-26 T 26-04-2016 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 PANTHER PTHR10909 1 475 1.1E-280 T 26-04-2016 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 591 3.6E-34 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 SUPERFAMILY SSF56645 36 279 4.84E-58 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 SUPERFAMILY SSF47203 286 474 1.77E-52 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 1.1E-8 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Gene3D G3DSA:1.10.540.10 38 159 1.6E-18 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02565 9cfb59d2f33b88997c92db649f34ad74 598 Gene3D G3DSA:1.20.140.10 267 461 7.8E-55 T 26-04-2016 PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 Gene3D G3DSA:2.30.110.20 1 160 2.2E-68 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 6.6E-44 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 PANTHER PTHR36152 1 162 5.0E-91 T 26-04-2016 PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 PANTHER PTHR36152:SF1 1 162 5.0E-91 T 26-04-2016 PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 13 144 9.0E-17 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS00435 af55f09929ed2e94d1582a23ac294bfb 162 SUPERFAMILY SSF141452 2 160 2.88E-58 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 SMART SM00382 210 356 3.0E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 PANTHER PTHR32071 7 530 0.0 T 26-04-2016 PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 PIRSF PIRSF037354 1 531 1.8E-299 T 26-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 188 3.2E-86 T 26-04-2016 IPR009715 Regulator of RNA terminal phosphate cyclase PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 Pfam PF00158 Sigma-54 interaction domain 190 358 1.2E-49 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 PANTHER PTHR32071:SF14 7 530 0.0 T 26-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 Gene3D G3DSA:3.40.50.300 187 362 5.2E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 SUPERFAMILY SSF52540 190 441 3.11E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23885 c042802456cabb461e7ca7d91c32c0dd 531 Gene3D G3DSA:1.10.8.60 367 443 6.9E-15 T 26-04-2016 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 SUPERFAMILY SSF51556 60 360 1.08E-86 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 Pfam PF01979 Amidohydrolase family 58 376 6.7E-21 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 Gene3D G3DSA:2.30.40.10 18 68 4.4E-14 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 Gene3D G3DSA:2.30.40.10 345 379 4.0E-8 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 PANTHER PTHR22642:SF1 20 401 3.1E-153 T 26-04-2016 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 PANTHER PTHR22642 20 401 3.1E-153 T 26-04-2016 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 394 1.2E-147 T 26-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.892 T 26-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 SUPERFAMILY SSF51338 361 399 1.36E-28 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 SUPERFAMILY SSF51338 1 60 1.36E-28 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26620 e14d827643697a771aace7cc28a1610f 402 Gene3D G3DSA:3.20.20.140 69 344 1.7E-45 T 26-04-2016 PAM18_RS11690 73d6cdba32d6e0d0547bd789694af618 226 PANTHER PTHR14119 1 204 2.4E-115 T 26-04-2016 PAM18_RS11690 73d6cdba32d6e0d0547bd789694af618 226 PANTHER PTHR14119:SF1 1 204 2.4E-115 T 26-04-2016 PAM18_RS11690 73d6cdba32d6e0d0547bd789694af618 226 Gene3D G3DSA:3.40.50.850 4 208 7.0E-45 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS11690 73d6cdba32d6e0d0547bd789694af618 226 SUPERFAMILY SSF52499 4 206 3.27E-44 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS11690 73d6cdba32d6e0d0547bd789694af618 226 Pfam PF00857 Isochorismatase family 14 167 1.7E-27 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS00350 b896da09e0ed331c49a8d53b17fc00d8 91 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 80 1.2E-36 T 26-04-2016 IPR012658 Conserved hypothetical protein CHP02443 PAM18_RS00350 b896da09e0ed331c49a8d53b17fc00d8 91 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 54 2.4E-25 T 26-04-2016 IPR012658 Conserved hypothetical protein CHP02443 PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 PANTHER PTHR11056:SF0 1 432 1.1E-250 T 26-04-2016 PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 8 426 2.9E-196 T 26-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 Gene3D G3DSA:2.60.120.10 243 397 8.0E-63 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 Gene3D G3DSA:2.60.120.10 194 219 2.4E-5 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 Pfam PF04209 homogentisate 1,2-dioxygenase 9 427 5.9E-213 T 26-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 9 429 70.729 T 26-04-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 SUPERFAMILY SSF51182 8 431 1.25E-159 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS15565 a085c97f5b60d684d889c05bd6a84c3e 432 PANTHER PTHR11056 1 432 1.1E-250 T 26-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.8E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.8E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.8E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SUPERFAMILY SSF158472 175 222 4.18E-5 T 26-04-2016 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PANTHER PTHR24423:SF354 165 442 5.0E-174 T 26-04-2016 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PANTHER PTHR24423:SF354 26 121 5.0E-174 T 26-04-2016 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 438 2.0E-168 T 26-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 291 2.0E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SMART SM00387 334 442 8.8E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SMART SM00388 225 291 1.8E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 Gene3D G3DSA:1.10.287.130 215 287 3.1E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SMART SM00304 171 224 2.2E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PANTHER PTHR24423 165 442 5.0E-174 T 26-04-2016 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 PANTHER PTHR24423 26 121 5.0E-174 T 26-04-2016 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 Gene3D G3DSA:3.30.565.10 296 439 3.3E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 436 2.1E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 Pfam PF00672 HAMP domain 152 220 4.8E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SUPERFAMILY SSF55874 280 438 5.11E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11050 e08845c89acf6f171205e7ad53502660 443 SUPERFAMILY SSF47384 208 291 9.61E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PANTHER PTHR30612 5 520 0.0 T 26-04-2016 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PANTHER PTHR30612 550 916 0.0 T 26-04-2016 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF02810 SEC-C motif 896 914 1.9E-10 T 26-04-2016 IPR004027 SEC-C motif PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SMART SM00958 228 358 1.7E-74 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 417 619 2.9E-92 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF01043 SecA preprotein cross-linking domain 232 358 5.1E-34 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 416 618 4.9E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 3 228 1.4E-129 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 369 416 1.4E-129 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 368 415 3.27E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 5 228 3.27E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81886 892 904 1.19E-81 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81886 620 840 1.19E-81 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 ProSitePatterns PS01312 SecA family signature. 500 515 - T 26-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SMART SM00957 6 402 0.0 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF07517 SecA DEAD-like domain 6 402 2.4E-133 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 818 0.0 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:1.10.3060.10 648 831 9.3E-59 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.073 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.90.1440.10 230 368 6.0E-42 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81767 227 368 1.57E-40 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 101 115 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 117 127 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 413 426 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 63 87 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 339 361 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 376 393 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 170 190 1.7E-70 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PAM18_RS22965 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF07516 SecA Wing and Scaffold domain 617 830 2.5E-67 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:1.10.8.50 1 71 1.3E-30 T 26-04-2016 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 PANTHER PTHR10871 1 118 2.3E-71 T 26-04-2016 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.0E-33 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.5E-55 T 26-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.697 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-27 T 26-04-2016 IPR027437 30s ribosomal protein S13, C-terminal PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 26-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 PIRSF PIRSF002134 1 118 5.3E-44 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03535 cd04fee333f03d42c7419d33aa6a7bd3 118 SUPERFAMILY SSF46946 2 114 3.01E-48 T 26-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PAM18_RS01135 2a594054050381e09665598162bb5988 432 PANTHER PTHR23508 4 432 0.0 T 26-04-2016 PAM18_RS01135 2a594054050381e09665598162bb5988 432 SUPERFAMILY SSF103473 12 424 2.62E-67 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01135 2a594054050381e09665598162bb5988 432 PANTHER PTHR23508:SF12 4 432 0.0 T 26-04-2016 PAM18_RS01135 2a594054050381e09665598162bb5988 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS01135 2a594054050381e09665598162bb5988 432 Gene3D G3DSA:1.20.1250.20 236 423 8.6E-23 T 26-04-2016 PAM18_RS01135 2a594054050381e09665598162bb5988 432 Gene3D G3DSA:1.20.1250.20 13 226 3.5E-25 T 26-04-2016 PAM18_RS01135 2a594054050381e09665598162bb5988 432 Pfam PF07690 Major Facilitator Superfamily 265 420 5.1E-12 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01135 2a594054050381e09665598162bb5988 432 Pfam PF00083 Sugar (and other) transporter 21 217 3.0E-24 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS01135 2a594054050381e09665598162bb5988 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 26 412 1.1E-139 T 26-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Gene3D G3DSA:3.40.50.150 28 252 1.2E-58 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 255 5.7E-99 T 26-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 PANTHER PTHR10108 8 255 1.7E-177 T 26-04-2016 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 26-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 PANTHER PTHR10108:SF864 8 255 1.7E-177 T 26-04-2016 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 26-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 SUPERFAMILY SSF53335 18 253 2.79E-52 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 2.4E-84 T 26-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PAM18_RS26480 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 39.028 T 26-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF54631 291 426 3.77E-21 T 26-04-2016 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF56176 438 514 3.0E-18 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03741 Integral membrane protein TerC family 15 203 5.8E-47 T 26-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF00571 CBS domain 374 423 1.0E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 PANTHER PTHR22777 1 514 0.0 T 26-04-2016 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 SMART SM01091 437 515 4.7E-22 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 PANTHER PTHR22777:SF14 1 514 0.0 T 26-04-2016 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03471 Transporter associated domain 439 514 2.0E-18 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.10.580.10 289 416 1.1E-12 T 26-04-2016 PAM18_RS18290 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.30.465.10 417 514 1.5E-22 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PANTHER PTHR30251:SF2 1 248 5.6E-123 T 26-04-2016 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PANTHER PTHR30251 1 248 5.6E-123 T 26-04-2016 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 26-04-2016 IPR018046 Pili assembly chaperone, conserved site PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 150 1.8E-40 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 Gene3D G3DSA:2.60.40.360 30 150 3.9E-40 T 26-04-2016 IPR008962 PapD-like PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 SUPERFAMILY SSF49354 25 149 1.78E-39 T 26-04-2016 IPR008962 PapD-like PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 SUPERFAMILY SSF49584 151 241 1.03E-17 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PRINTS PR00969 Pili chaperone signature 79 100 3.2E-29 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PRINTS PR00969 Pili chaperone signature 172 187 3.2E-29 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PRINTS PR00969 Pili chaperone signature 131 146 3.2E-29 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PRINTS PR00969 Pili chaperone signature 107 124 3.2E-29 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 PRINTS PR00969 Pili chaperone signature 30 39 3.2E-29 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 Gene3D G3DSA:2.60.40.1070 152 240 3.9E-22 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS04355 b9e40d0a6d1da02a4a6f728f91de51bf 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 240 2.0E-21 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 SMART SM00419 171 219 1.8E-14 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 PANTHER PTHR24567 1 224 1.7E-54 T 26-04-2016 PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 6.1E-18 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 SMART SM00100 16 135 2.9E-25 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 224 2.2E-15 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 Gene3D G3DSA:2.60.120.10 11 150 1.1E-32 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 Gene3D G3DSA:1.10.10.10 153 224 1.2E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 SUPERFAMILY SSF46785 150 224 2.92E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 PANTHER PTHR24567:SF30 1 224 1.7E-54 T 26-04-2016 PAM18_RS02665 797cf78a2aacb6275062975f5d0172a1 227 SUPERFAMILY SSF51206 9 150 4.45E-32 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 129 1.6E-32 T 26-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 Gene3D G3DSA:3.10.180.10 2 131 2.2E-43 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 SUPERFAMILY SSF54593 3 130 5.63E-40 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 PANTHER PTHR33990 2 132 3.1E-64 T 26-04-2016 PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 PIRSF PIRSF021700 1 132 2.5E-42 T 26-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 PANTHER PTHR33990:SF4 2 132 3.1E-64 T 26-04-2016 PAM18_RS18155 1bede523fe05c5c9b38a1bb138b414ef 132 PIRSF PIRSF500687 1 132 2.6E-64 T 26-04-2016 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial PAM18_RS00585 450f44bb4e59cec418e5f196abd8ffd1 150 SUPERFAMILY SSF55729 3 149 2.57E-32 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS00585 450f44bb4e59cec418e5f196abd8ffd1 150 Gene3D G3DSA:3.40.630.30 3 149 1.2E-52 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS00585 450f44bb4e59cec418e5f196abd8ffd1 150 PANTHER PTHR23091:SF275 12 149 1.9E-46 T 26-04-2016 PAM18_RS00585 450f44bb4e59cec418e5f196abd8ffd1 150 PANTHER PTHR23091 12 149 1.9E-46 T 26-04-2016 PAM18_RS00585 450f44bb4e59cec418e5f196abd8ffd1 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 5.2E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 Gene3D G3DSA:1.10.357.10 7 182 2.2E-30 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF46689 5 72 2.26E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 56 6.3E-13 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 PANTHER PTHR30055 2 174 1.2E-88 T 26-04-2016 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 PANTHER PTHR30055:SF57 2 174 1.2E-88 T 26-04-2016 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF48498 79 184 8.9E-14 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19385 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS13625 5ed9497801db012689532efe8e5fd9d9 548 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 6.5E-4 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAM18_RS13625 5ed9497801db012689532efe8e5fd9d9 548 Gene3D G3DSA:1.10.1280.10 354 452 3.5E-4 T 26-04-2016 IPR008922 Uncharacterised domain, di-copper centre PAM18_RS13625 5ed9497801db012689532efe8e5fd9d9 548 SUPERFAMILY SSF48056 254 448 1.01E-7 T 26-04-2016 IPR008922 Uncharacterised domain, di-copper centre PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-70 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 Pfam PF01765 Ribosome recycling factor 22 183 1.4E-61 T 26-04-2016 IPR023584 Ribosome recycling factor domain PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.534 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 SUPERFAMILY SSF55194 1 185 4.71E-70 T 26-04-2016 IPR023584 Ribosome recycling factor domain PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 Gene3D G3DSA:1.10.132.20 68 185 5.1E-43 T 26-04-2016 IPR023584 Ribosome recycling factor domain PAM18_RS06545 e5dce18c9f5be27837de0c012fcb3caa 185 PANTHER PTHR20982 1 185 2.5E-78 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PANTHER PTHR13847:SF189 120 222 1.3E-173 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PANTHER PTHR13847:SF189 615 927 1.3E-173 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 907 990 4.4E-11 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 SUPERFAMILY SSF101790 906 1003 1.16E-17 T 26-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:2.40.30.110 909 1004 2.2E-20 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PANTHER PTHR13847 120 222 1.3E-173 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PANTHER PTHR13847 615 927 1.3E-173 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 3.5E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 3.5E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 459 477 3.5E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1004 0.0 T 26-04-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 SUPERFAMILY SSF103025 613 895 1.4E-92 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 SUPERFAMILY SSF51905 167 448 2.27E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:3.50.50.60 166 312 2.1E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:3.50.50.60 359 439 2.1E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:3.30.70.1400 674 748 1.5E-23 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 6.7E-23 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:3.30.1360.120 614 673 1.4E-29 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Gene3D G3DSA:3.30.1360.120 768 861 1.4E-29 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PIRSF PIRSF037980 1 1004 0.0 T 26-04-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 434 1.6E-12 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 619 884 2.6E-75 T 26-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 3.4E-8 T 26-04-2016 PAM18_RS28310 936e3c78a79e29f8f7a47351de188936 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 3.4E-8 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 PANTHER PTHR30537 1 308 2.4E-136 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:1.10.10.10 3 81 9.7E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF03466 LysR substrate binding domain 88 290 1.3E-42 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF53850 87 294 6.88E-43 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 176 259 5.4E-21 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 91 175 1.8E-25 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF46785 6 111 8.52E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 PANTHER PTHR30537:SF5 1 308 2.4E-136 T 26-04-2016 PAM18_RS14980 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 7.8E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.30.465.10 192 278 7.7E-27 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 72 121 13.0 T 26-04-2016 IPR000644 CBS domain PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 136 184 0.64 T 26-04-2016 IPR000644 CBS domain PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 PANTHER PTHR22777 18 279 5.2E-117 T 26-04-2016 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF54631 60 198 1.64E-31 T 26-04-2016 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 Pfam PF03471 Transporter associated domain 202 277 1.0E-20 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF56176 198 278 3.82E-22 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 PANTHER PTHR22777:SF17 18 279 5.2E-117 T 26-04-2016 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.10.580.10 51 191 7.7E-19 T 26-04-2016 PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 SMART SM01091 200 278 6.8E-30 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 136 184 3.9E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS04860 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 63 120 0.0058 T 26-04-2016 IPR000644 CBS domain PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 Pfam PF03600 Citrate transporter 17 555 7.7E-58 T 26-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283:SF12 1 225 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283:SF12 244 268 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283:SF12 448 609 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283:SF12 302 353 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 SUPERFAMILY SSF116726 317 393 2.75E-17 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 SUPERFAMILY SSF116726 232 307 8.89E-10 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 Pfam PF02080 TrkA-C domain 326 392 3.9E-12 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 Pfam PF02080 TrkA-C domain 232 300 2.2E-11 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283 1 225 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283 244 268 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283 448 609 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 PANTHER PTHR10283 302 353 8.0E-221 T 26-04-2016 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 26-04-2016 IPR031312 Sodium/sulphate symporter, conserved site PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 Gene3D G3DSA:3.30.70.1450 232 308 1.5E-14 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS05575 2499f8790541d26b4b2aae9b1fac1d55 610 Gene3D G3DSA:3.30.70.1450 322 395 5.5E-21 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 2.9E-85 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 PIRSF PIRSF016184 1 278 8.0E-82 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 PANTHER PTHR13774:SF18 1 276 1.1E-111 T 26-04-2016 PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 6.1E-56 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 125 267 6.3E-40 T 26-04-2016 PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 PANTHER PTHR13774 1 276 1.1E-111 T 26-04-2016 PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 SUPERFAMILY SSF54506 2 277 2.79E-67 T 26-04-2016 PAM18_RS16080 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 2 124 7.2E-41 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 260 2.4E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 141 2.3E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Gene3D G3DSA:3.30.450.20 153 252 6.3E-24 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Gene3D G3DSA:3.30.450.20 34 133 6.7E-25 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SMART SM00091 20 88 1.8E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SMART SM00091 140 209 9.5 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SUPERFAMILY SSF55785 152 254 3.84E-25 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SUPERFAMILY SSF55785 30 132 3.91E-26 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SMART SM00283 246 440 3.0E-24 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Pfam PF08447 PAS fold 165 250 3.0E-15 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SUPERFAMILY SSF58104 248 435 1.19E-56 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Pfam PF13426 PAS domain 37 132 3.7E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 290 436 2.0E-42 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 PANTHER PTHR24422 6 439 1.6E-251 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 PANTHER PTHR24422:SF10 6 439 1.6E-251 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 Gene3D G3DSA:1.10.287.950 253 435 3.7E-49 T 26-04-2016 PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SMART SM00086 93 135 0.049 T 26-04-2016 IPR001610 PAC motif PAM18_RS18970 48223f5fc6c5be2e6fb11a54b60d4dc2 440 SMART SM00086 215 257 1.4E-7 T 26-04-2016 IPR001610 PAC motif PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 Gene3D G3DSA:3.90.76.10 62 210 3.5E-28 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 SUPERFAMILY SSF53850 48 590 7.24E-116 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 505 2.5E-70 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 Gene3D G3DSA:3.40.190.10 211 323 5.4E-24 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 PANTHER PTHR30290:SF2 4 356 1.9E-240 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 PANTHER PTHR30290:SF2 381 601 1.9E-240 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 PANTHER PTHR30290 4 356 1.9E-240 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 PANTHER PTHR30290 381 601 1.9E-240 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 Gene3D G3DSA:3.10.105.10 324 560 3.8E-39 T 26-04-2016 PAM18_RS15315 737f2af2ec09f3050306573dd2defc3c 602 PIRSF PIRSF002741 6 594 1.2E-103 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 PANTHER PTHR24220:SF193 3 241 1.1E-93 T 26-04-2016 PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 Pfam PF00005 ABC transporter 18 160 4.6E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 SMART SM00382 26 210 4.5E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 SUPERFAMILY SSF52540 2 224 1.85E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 Gene3D G3DSA:3.40.50.300 1 230 2.3E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04595 5ab2c049c1215d3e1b8a471c5454d680 308 PANTHER PTHR24220 3 241 1.1E-93 T 26-04-2016 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 SMART SM00411 1 90 9.4E-43 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 26-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 Gene3D G3DSA:4.10.520.10 1 90 7.0E-36 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-32 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 SUPERFAMILY SSF47729 1 90 2.94E-31 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS16600 e5a40123298533bd77ac5fd6af139ed8 90 PANTHER PTHR33175 1 90 8.9E-44 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 569 675 7.59E-25 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82866 298 499 6.67E-51 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82714 726 811 4.71E-20 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 137 184 5.75E-25 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 276 332 5.75E-25 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Pfam PF00873 AcrB/AcrD/AcrF family 4 1031 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1039 0.0 T 26-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:3.30.2090.10 726 811 1.1E-21 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82714 185 273 3.27E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 40 134 1.15E-27 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PANTHER PTHR32063 1 1040 0.0 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:3.30.70.1430 40 142 1.2E-33 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 812 861 4.97E-27 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82693 676 725 4.97E-27 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:3.30.70.1430 573 675 1.5E-26 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:3.30.2090.10 184 274 7.1E-25 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:1.10.3850.10 819 1030 7.8E-58 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 Gene3D G3DSA:1.10.3850.10 284 500 9.4E-62 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 SUPERFAMILY SSF82866 835 1030 3.4E-43 T 26-04-2016 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.7E-84 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07535 c8334ec8f53bd708602fe41748376ca8 1053 PANTHER PTHR32063:SF26 1 1040 0.0 T 26-04-2016 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 SUPERFAMILY SSF52913 184 278 1.96E-24 T 26-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 SUPERFAMILY SSF55205 5 175 1.77E-58 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 PIRSF PIRSF005378 2 339 4.1E-97 T 26-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Gene3D G3DSA:3.65.10.20 274 325 4.8E-80 T 26-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Gene3D G3DSA:3.65.10.20 5 176 4.8E-80 T 26-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 183 272 2.5E-8 T 26-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 5 338 38.664 T 26-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 6 324 2.4E-126 T 26-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 156 166 - T 26-04-2016 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Pfam PF01137 RNA 3'-terminal phosphate cyclase 12 324 6.5E-76 T 26-04-2016 IPR023797 RNA 3'-terminal phosphate cyclase domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 PANTHER PTHR11096:SF0 1 339 2.1E-107 T 26-04-2016 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 SUPERFAMILY SSF55205 271 331 9.15E-7 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 Gene3D G3DSA:3.30.360.20 184 273 8.0E-29 T 26-04-2016 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain PAM18_RS23910 e6cd91571a4176a00527ae17a03e9d27 341 PANTHER PTHR11096 1 339 2.1E-107 T 26-04-2016 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SUPERFAMILY SSF55785 335 445 3.89E-23 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.40.190.10 222 262 3.7E-15 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.40.190.10 38 127 3.7E-15 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SUPERFAMILY SSF55874 671 792 5.18E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 443 1.1E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 575 1.4E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00091 448 521 0.12 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00091 323 389 8.2E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SUPERFAMILY SSF53850 37 262 2.26E-36 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00387 700 794 4.1E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.30.565.10 651 792 6.2E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 3.3E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 750 3.3E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 791 3.3E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.30.450.20 315 433 1.9E-18 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Pfam PF08448 PAS fold 330 438 5.1E-11 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.30.450.20 434 566 6.3E-22 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 PANTHER PTHR24423 276 797 6.9E-48 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Pfam PF07730 Histidine kinase 596 662 4.2E-14 T 26-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Pfam PF08447 PAS fold 476 560 2.8E-15 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Gene3D G3DSA:3.40.190.10 130 217 5.0E-6 T 26-04-2016 PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 701 792 5.9E-12 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SUPERFAMILY SSF55785 433 566 5.39E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00062 41 262 1.4E-25 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 260 1.3E-26 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00086 527 568 13.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS03040 881c290f64f039284f7263d601915d6b 797 SMART SM00086 396 436 2.5E-4 T 26-04-2016 IPR001610 PAC motif PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 SUPERFAMILY SSF51395 11 372 5.38E-107 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 SUPERFAMILY SSF51905 479 636 3.24E-16 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 SUPERFAMILY SSF51971 343 527 1.65E-40 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 408 1.3E-5 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 628 642 1.3E-5 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 Gene3D G3DSA:3.20.20.70 13 369 1.3E-112 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PANTHER PTHR22893 1 427 0.0 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 507 525 1.1E-11 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 627 643 1.1E-11 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 1.1E-11 T 26-04-2016 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 Gene3D G3DSA:3.50.50.60 480 634 1.1E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 Gene3D G3DSA:3.50.50.60 370 475 4.7E-26 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 340 1.2E-70 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 644 2.6E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25210 58b891ad248ecf69d5188978981c4512 681 PANTHER PTHR22893:SF56 1 427 0.0 T 26-04-2016 PAM18_RS16040 155ace170bbe858cadd5fa2ba301cbad 316 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 5.8E-15 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS16040 155ace170bbe858cadd5fa2ba301cbad 316 PANTHER PTHR30273:SF3 7 315 1.2E-139 T 26-04-2016 PAM18_RS16040 155ace170bbe858cadd5fa2ba301cbad 316 PANTHER PTHR30273 7 315 1.2E-139 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS16040 155ace170bbe858cadd5fa2ba301cbad 316 Pfam PF04773 FecR protein 115 204 4.7E-20 T 26-04-2016 IPR006860 FecR protein PAM18_RS16040 155ace170bbe858cadd5fa2ba301cbad 316 PIRSF PIRSF018266 4 316 1.5E-93 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 Gene3D G3DSA:1.10.3210.10 144 303 1.3E-24 T 26-04-2016 IPR006674 HD domain PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 SMART SM00471 153 289 7.7E-12 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 TIGRFAM TIGR00277 HDIG: HDIG domain 155 246 6.5E-9 T 26-04-2016 IPR006675 HDIG domain PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 SUPERFAMILY SSF109604 151 317 1.24E-33 T 26-04-2016 PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 Pfam PF01966 HD domain 158 279 3.9E-15 T 26-04-2016 IPR006674 HD domain PAM18_RS04235 d1d8129656a7c7128abf2da77df2d1f1 414 Pfam PF11871 Domain of unknown function (DUF3391) 2 125 1.8E-35 T 26-04-2016 IPR021812 Protein of unknown function DUF3391 PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 Gene3D G3DSA:3.10.20.280 2 90 1.3E-30 T 26-04-2016 IPR005346 RnfH protein PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 PANTHER PTHR37483 1 99 8.5E-40 T 26-04-2016 PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 SUPERFAMILY SSF54285 4 80 5.23E-21 T 26-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 PANTHER PTHR37483:SF1 1 99 8.5E-40 T 26-04-2016 PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 Hamap MF_00460 Protein RnfH [rnfH]. 4 96 24.703 T 26-04-2016 IPR005346 RnfH protein PAM18_RS24960 e9332a446bb0f7358fa133666086463b 101 Pfam PF03658 RnfH family Ubiquitin 4 88 8.2E-30 T 26-04-2016 IPR005346 RnfH protein PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 ProSitePatterns PS00543 HlyD family secretion proteins signature. 396 418 - T 26-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 353 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 411 431 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 396 411 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 317 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 376 7.0E-63 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PANTHER PTHR30386 143 432 5.6E-187 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PANTHER PTHR30386 1 106 5.6E-187 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PANTHER PTHR30386:SF3 143 432 5.6E-187 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 PANTHER PTHR30386:SF3 1 106 5.6E-187 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 Pfam PF00529 HlyD membrane-fusion protein of T1SS 23 388 1.9E-20 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 12 431 9.4E-122 T 26-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:2.40.50.100 281 316 5.8E-16 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 Gene3D G3DSA:2.40.50.100 53 85 5.8E-16 T 26-04-2016 PAM18_RS19350 937f34d461ca0c798ff53cb25ac94da1 432 SUPERFAMILY SSF111369 54 111 3.01E-6 T 26-04-2016 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 337 2.4E-107 T 26-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 Gene3D G3DSA:3.30.930.10 9 338 9.9E-134 T 26-04-2016 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.826 T 26-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF55681 92 338 2.68E-82 T 26-04-2016 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF46589 13 99 1.46E-23 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 PANTHER PTHR11538 90 338 2.7E-110 T 26-04-2016 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 6.7E-109 T 26-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PAM18_RS11480 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 7.1E-28 T 26-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:1.10.10.10 140 241 9.0E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF46894 140 240 6.52E-26 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:3.40.50.2300 11 129 1.0E-43 T 26-04-2016 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 SMART SM00862 161 238 1.2E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00072 Response regulator receiver domain 13 123 3.7E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF52172 7 132 8.25E-43 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 PANTHER PTHR26402:SF292 11 241 1.7E-107 T 26-04-2016 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 PANTHER PTHR26402 11 241 1.7E-107 T 26-04-2016 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 2.7E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS27190 9ea9dc4796be49889408ed925fba373f 247 SMART SM00448 11 122 6.9E-44 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 SUPERFAMILY SSF48163 314 472 7.59E-34 T 26-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 SUPERFAMILY SSF52374 4 308 1.42E-110 T 26-04-2016 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:3.40.50.620 3 68 4.0E-46 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:3.40.50.620 195 244 4.0E-46 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 1.3E-21 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 1.3E-21 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.3E-21 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.3E-21 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.3E-21 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 320 9.1E-110 T 26-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:1.10.1160.10 246 328 1.3E-32 T 26-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PANTHER PTHR11451 4 333 7.1E-106 T 26-04-2016 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:1.10.10.350 372 472 5.6E-13 T 26-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 470 3.2E-142 T 26-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 PANTHER PTHR11451:SF41 4 333 7.1E-106 T 26-04-2016 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Gene3D G3DSA:3.90.800.10 69 194 9.9E-42 T 26-04-2016 PAM18_RS09375 f8979af61565d9f0a81379bce2775104 494 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 471 29.97 T 26-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.30.70.270 252 419 5.6E-46 T 26-04-2016 PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.20.20.450 424 674 3.3E-100 T 26-04-2016 IPR001633 EAL domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 PANTHER PTHR33121 340 687 3.9E-106 T 26-04-2016 PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00563 EAL domain 427 662 1.9E-75 T 26-04-2016 IPR001633 EAL domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF55073 255 411 2.2E-38 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 409 6.2E-29 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 PANTHER PTHR33121:SF13 340 687 3.9E-106 T 26-04-2016 PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00267 239 411 1.1E-43 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00052 421 667 2.8E-122 T 26-04-2016 IPR001633 EAL domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 407 3.9E-38 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22780 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF141868 426 676 4.71E-93 T 26-04-2016 IPR001633 EAL domain PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 PANTHER PTHR30050:SF5 1 232 1.2E-120 T 26-04-2016 PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 Gene3D G3DSA:1.10.8.60 168 234 7.2E-30 T 26-04-2016 PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 SUPERFAMILY SSF52540 14 213 9.38E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 Gene3D G3DSA:3.40.50.300 2 164 9.5E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 232 4.7E-89 T 26-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 PANTHER PTHR30050 1 232 1.2E-120 T 26-04-2016 PAM18_RS20885 cee3f8c7cf2f02e8ff865a9efa9446cd 234 Pfam PF00308 Bacterial dnaA protein 14 212 2.3E-20 T 26-04-2016 IPR013317 Chromosomal replication initiator protein DnaA PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:2.40.40.20 626 763 1.6E-19 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615:SF110 550 765 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615:SF110 7 251 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615:SF110 268 509 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF01568 Molydopterin dinucleotide binding domain 644 754 1.8E-16 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615 550 765 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615 7 251 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 PANTHER PTHR11615 268 509 0.0 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 SMART SM00926 6 59 1.3E-12 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.50.740 391 486 9.3E-31 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.50.740 65 146 9.3E-31 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 425 442 - T 26-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:2.20.25.90 7 64 1.1E-16 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.228.10 148 390 1.2E-46 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 SUPERFAMILY SSF50692 628 762 2.03E-24 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 SUPERFAMILY SSF53706 7 494 7.33E-113 T 26-04-2016 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF00384 Molybdopterin oxidoreductase 63 452 2.4E-35 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS11610 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 58 3.8E-16 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 7.5E-126 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 SUPERFAMILY SSF160544 245 352 8.89E-41 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PANTHER PTHR30531:SF4 1 362 4.7E-256 T 26-04-2016 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 Gene3D G3DSA:3.40.1690.10 219 358 3.0E-61 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 2.4E-124 T 26-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PANTHER PTHR30531 1 362 4.7E-256 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.9E-35 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.9E-35 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.9E-35 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.9E-35 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18840 d7a9ffe1692cd6e38b73797d609dd704 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.9E-35 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 Gene3D G3DSA:2.40.170.20 154 610 3.0E-89 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 SUPERFAMILY SSF56935 31 609 2.41E-120 T 26-04-2016 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 Gene3D G3DSA:2.170.130.10 22 153 3.5E-40 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 1.0E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 Pfam PF00593 TonB dependent receptor 387 610 1.9E-33 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 1.5E-286 T 26-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 PANTHER PTHR30069:SF2 6 553 1.5E-90 T 26-04-2016 PAM18_RS19220 01d101d71e9768faeed33e2d53ce97af 612 PANTHER PTHR30069 6 553 1.5E-90 T 26-04-2016 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 SUPERFAMILY SSF88946 4 97 7.26E-23 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 Pfam PF08281 Sigma-70, region 4 137 189 4.6E-11 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 PANTHER PTHR30173:SF1 1 199 1.4E-38 T 26-04-2016 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 189 6.0E-24 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 Pfam PF04542 Sigma-70 region 2 24 90 2.0E-12 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 Gene3D G3DSA:1.10.10.10 133 196 6.5E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 SUPERFAMILY SSF88659 119 194 6.17E-14 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 PANTHER PTHR30173 1 199 1.4E-38 T 26-04-2016 PAM18_RS08630 372c5393061a958df37b5083ba376b19 203 Gene3D G3DSA:1.10.1740.10 4 103 2.6E-25 T 26-04-2016 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 Gene3D G3DSA:1.10.439.10 43 201 1.0E-48 T 26-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 PIRSF PIRSF001227 16 794 8.0E-171 T 26-04-2016 IPR014395 Penicillin acylase GO:0016811 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 SUPERFAMILY SSF56235 44 790 5.92E-194 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 Pfam PF01804 Penicillin amidase 50 783 1.0E-196 T 26-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 PANTHER PTHR34218:SF2 6 801 4.7E-294 T 26-04-2016 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 PANTHER PTHR34218 6 801 4.7E-294 T 26-04-2016 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 Gene3D G3DSA:2.30.120.10 332 405 2.5E-22 T 26-04-2016 PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 Gene3D G3DSA:3.60.20.10 415 600 2.3E-96 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS16135 77a79c19c5329c8ebed2c6f50772189b 809 Gene3D G3DSA:3.60.20.10 205 331 2.3E-96 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 3.1E-12 T 26-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 Gene3D G3DSA:2.102.10.10 7 193 1.9E-45 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 PANTHER PTHR10134:SF8 1 195 1.1E-117 T 26-04-2016 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 2.2E-9 T 26-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.2E-9 T 26-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 2.2E-9 T 26-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 PANTHER PTHR10134 1 195 1.1E-117 T 26-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 2.5E-73 T 26-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 Pfam PF00355 Rieske [2Fe-2S] domain 114 178 2.3E-10 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS23105 2a5a290983f41318407d5891d4572cfc 197 SUPERFAMILY SSF50022 30 190 1.52E-44 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 PANTHER PTHR26402 2 187 4.1E-85 T 26-04-2016 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 PIRSF PIRSF036382 1 191 2.7E-66 T 26-04-2016 IPR008327 Signal transduction response regulator, antiterminator PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 SUPERFAMILY SSF52172 1 184 1.99E-45 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 Gene3D G3DSA:1.10.10.10 138 191 3.0E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 SMART SM00448 2 113 2.6E-10 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 SMART SM01012 129 184 9.6E-19 T 26-04-2016 IPR005561 ANTAR domain GO:0003723 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 PANTHER PTHR26402:SF567 2 187 4.1E-85 T 26-04-2016 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 Gene3D G3DSA:3.40.50.2300 1 137 6.4E-16 T 26-04-2016 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 Pfam PF03861 ANTAR domain 133 184 6.7E-16 T 26-04-2016 IPR005561 ANTAR domain GO:0003723 PAM18_RS16725 e56329fba0b10c892e3d5d667c0adf09 192 Pfam PF00072 Response regulator receiver domain 4 110 4.6E-9 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 PANTHER PTHR20852 5 443 8.7E-140 T 26-04-2016 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 SMART SM01230 105 353 2.0E-67 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 Gene3D G3DSA:3.30.590.10 108 425 4.9E-77 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 PANTHER PTHR20852:SF16 5 443 8.7E-140 T 26-04-2016 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 Pfam PF00120 Glutamine synthetase, catalytic domain 106 426 1.8E-88 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 SUPERFAMILY SSF55931 105 440 1.18E-80 T 26-04-2016 PAM18_RS28770 a79baeb76eea8cc705e481f19a88fdd1 443 Pfam PF16952 Glutamine synthetase N-terminal domain 3 104 1.3E-44 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 PANTHER PTHR30519:SF0 1 766 0.0 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 PIRSF PIRSF000382 1 765 0.0 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 SUPERFAMILY SSF51726 400 761 1.83E-120 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 SUPERFAMILY SSF51726 3 398 4.45E-116 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 Gene3D G3DSA:3.20.20.210 396 764 9.6E-136 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 PANTHER PTHR30519 1 766 0.0 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 762 37.549 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 Gene3D G3DSA:3.20.20.210 4 393 6.1E-153 T 26-04-2016 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 760 0.0 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 317 4.6E-118 T 26-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PAM18_RS15955 b4c6c94a3ef76cab2b9e5f76a6777212 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 435 757 6.5E-154 T 26-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 1.8E-88 T 26-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 Pfam PF03352 Methyladenine glycosylase 6 177 4.5E-70 T 26-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 SUPERFAMILY SSF48150 1 181 1.41E-74 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 PANTHER PTHR30037:SF4 1 181 8.7E-107 T 26-04-2016 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 Gene3D G3DSA:1.10.340.30 2 178 7.9E-74 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS00050 4be76aa274bbfa64ab621981982d2601 183 PANTHER PTHR30037 1 181 8.7E-107 T 26-04-2016 PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 5 45 5.4E-21 T 26-04-2016 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Gene3D G3DSA:3.40.50.970 8 407 2.0E-129 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 PANTHER PTHR11516:SF31 1 408 0.0 T 26-04-2016 PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 SUPERFAMILY SSF52518 4 407 1.44E-96 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 Pfam PF00676 Dehydrogenase E1 component 81 376 1.6E-98 T 26-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PAM18_RS14350 d38d22ac8b3ca084dc4a0e56e957cd4e 410 PANTHER PTHR11516 1 408 0.0 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 SUPERFAMILY SSF69279 10 184 4.82E-57 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 PANTHER PTHR32305:SF11 1 634 0.0 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 SUPERFAMILY SSF69255 366 454 2.46E-34 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 Gene3D G3DSA:3.55.50.10 95 189 2.2E-36 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 1.3E-125 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 PANTHER PTHR32305 1 634 0.0 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 SUPERFAMILY SSF69279 184 366 5.1E-45 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 SUPERFAMILY SSF69349 444 626 1.49E-37 T 26-04-2016 PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 Gene3D G3DSA:2.40.50.230 372 454 1.1E-40 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 1.4E-204 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS27525 7192165bd0b2356a1f5a829f1889a496 691 Pfam PF05954 Phage late control gene D protein (GPD) 29 322 8.0E-80 T 26-04-2016 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 ProSitePatterns PS01344 Frataxin family signature. 51 65 - T 26-04-2016 IPR020895 Frataxin conserved site PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 Pfam PF01491 Frataxin-like domain 4 105 1.6E-22 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 SUPERFAMILY SSF55387 2 106 3.49E-31 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 5 108 3.2E-34 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 Hamap MF_00142 Protein CyaY [cyaY]. 4 108 25.623 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 Gene3D G3DSA:3.30.920.10 2 108 7.3E-28 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 PANTHER PTHR16821 1 111 1.3E-34 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS27570 1a209ae39dc3410429ff54689c551667 111 SMART SM01219 4 109 1.1E-46 T 26-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.4E-34 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.4E-34 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.4E-34 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.4E-34 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PANTHER PTHR11879:SF12 1 396 6.3E-295 T 26-04-2016 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 PANTHER PTHR11879 1 396 6.3E-295 T 26-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 SUPERFAMILY SSF53383 1 397 1.75E-111 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 Pfam PF00155 Aminotransferase class I and II 29 393 3.0E-80 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS21295 fb74bf5138c590927bf38c39b1a0cd01 399 Gene3D G3DSA:3.40.640.10 48 316 3.0E-93 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS04900 5b17494f37ff08e952aed89dd77766f4 265 PANTHER PTHR20858 6 262 1.2E-71 T 26-04-2016 PAM18_RS04900 5b17494f37ff08e952aed89dd77766f4 265 Gene3D G3DSA:3.40.1190.20 8 256 2.6E-73 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS04900 5b17494f37ff08e952aed89dd77766f4 265 SUPERFAMILY SSF53613 6 255 1.18E-61 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS04900 5b17494f37ff08e952aed89dd77766f4 265 Pfam PF08543 Phosphomethylpyrimidine kinase 17 253 7.9E-70 T 26-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 Gene3D G3DSA:1.20.1250.20 10 188 1.0E-17 T 26-04-2016 PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 Gene3D G3DSA:1.20.1250.20 208 390 4.0E-20 T 26-04-2016 PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 PANTHER PTHR11360:SF115 1 394 7.6E-167 T 26-04-2016 PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 PANTHER PTHR11360 1 394 7.6E-167 T 26-04-2016 PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 SUPERFAMILY SSF103473 3 388 4.32E-55 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19145 ecdbcd6ad0f5883531467b664be74459 399 Pfam PF07690 Major Facilitator Superfamily 14 312 1.5E-27 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 SUPERFAMILY SSF52833 1 103 1.53E-34 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 Gene3D G3DSA:3.40.30.10 7 101 9.3E-32 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.8E-46 T 26-04-2016 IPR004480 Monothiol glutaredoxin-related PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 Pfam PF00462 Glutaredoxin 16 80 1.5E-18 T 26-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 PANTHER PTHR10293 1 105 1.4E-58 T 26-04-2016 IPR004480 Monothiol glutaredoxin-related PAM18_RS07480 80d5fdf6347d0133c58bb3867e1d0d88 108 PIRSF PIRSF005894 1 107 2.6E-50 T 26-04-2016 IPR014434 Monothiol glutaredoxin PAM18_RS24045 7ad5ab9f788eb6463d028f0f4079aa56 84 Pfam PF04325 Protein of unknown function (DUF465) 29 75 2.1E-13 T 26-04-2016 IPR007420 Protein of unknown function DUF465 PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 PANTHER PTHR34406:SF1 1 191 2.6E-66 T 26-04-2016 PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Pfam PF04264 YceI-like domain 26 187 1.2E-41 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 PANTHER PTHR34406 1 191 2.6E-66 T 26-04-2016 PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SMART SM00867 25 189 1.3E-71 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Gene3D G3DSA:2.40.128.110 23 191 1.4E-59 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Hamap MF_00780 Protein YceI [yceI]. 2 191 45.339 T 26-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI PAM18_RS02140 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SUPERFAMILY SSF101874 22 191 2.88E-56 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF09339 IclR helix-turn-helix domain 46 95 2.9E-16 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF46785 44 118 6.83E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 PANTHER PTHR30136 20 286 1.5E-158 T 26-04-2016 PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 PANTHER PTHR30136:SF4 20 286 1.5E-158 T 26-04-2016 PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 SMART SM00346 44 134 2.6E-21 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:3.30.450.40 115 286 7.7E-36 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF01614 Bacterial transcriptional regulator 162 278 1.4E-10 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:1.10.10.10 39 114 1.6E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17515 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF55781 111 286 7.19E-37 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS23345 82a3c07ba6ca7b0f3a3ff205fd335379 164 PANTHER PTHR37484 3 164 6.7E-70 T 26-04-2016 PAM18_RS23345 82a3c07ba6ca7b0f3a3ff205fd335379 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 2.4E-36 T 26-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PAM18_RS23345 82a3c07ba6ca7b0f3a3ff205fd335379 164 PIRSF PIRSF018472 2 164 5.8E-55 T 26-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type PAM18_RS23345 82a3c07ba6ca7b0f3a3ff205fd335379 164 Pfam PF04093 rod shape-determining protein MreD 8 156 4.7E-40 T 26-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 PANTHER PTHR34990 1 233 4.1E-124 T 26-04-2016 PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 PANTHER PTHR34990:SF1 1 233 4.1E-124 T 26-04-2016 PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 Gene3D G3DSA:3.60.21.10 173 222 1.6E-20 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 Gene3D G3DSA:3.60.21.10 1 125 1.6E-20 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 SUPERFAMILY SSF56300 1 224 5.43E-29 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 129.04 T 26-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 233 1.5E-114 T 26-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 PAM18_RS16690 d887f3e2ecea95d89e046b5da5b991fc 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.1E-8 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PANTHER PTHR30012 9 405 1.2E-166 T 26-04-2016 PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 2.7E-30 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 5.5E-33 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 26-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PANTHER PTHR30012:SF0 9 405 1.2E-166 T 26-04-2016 PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 3.2E-19 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.2E-19 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 3.2E-19 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS23595 2fab316d08be408f5e875b8c9befc31e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.2E-19 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 SUPERFAMILY SSF102588 179 276 1.07E-32 T 26-04-2016 IPR024078 Putative deacetylase LmbE-like domain PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 SUPERFAMILY SSF102588 303 447 1.07E-32 T 26-04-2016 IPR024078 Putative deacetylase LmbE-like domain PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 Gene3D G3DSA:3.40.50.10320 180 267 4.6E-21 T 26-04-2016 IPR024078 Putative deacetylase LmbE-like domain PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 Gene3D G3DSA:3.40.50.10320 307 425 4.6E-21 T 26-04-2016 IPR024078 Putative deacetylase LmbE-like domain PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 Pfam PF02585 GlcNAc-PI de-N-acetylase 183 352 3.1E-13 T 26-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 PANTHER PTHR12993 135 280 3.7E-84 T 26-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 PANTHER PTHR12993 309 397 3.7E-84 T 26-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 PANTHER PTHR12993:SF10 135 280 3.7E-84 T 26-04-2016 PAM18_RS26175 d691bb63f2c1be333f70e4f943f241dd 472 PANTHER PTHR12993:SF10 309 397 3.7E-84 T 26-04-2016 PAM18_RS08935 91264fa1e0ce4773b3b01232099adec6 88 Pfam PF10976 Protein of unknown function (DUF2790) 11 85 1.1E-25 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 3.2E-48 T 26-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 SUPERFAMILY SSF54427 5 161 5.24E-53 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 PANTHER PTHR41534 1 162 4.2E-99 T 26-04-2016 PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 Gene3D G3DSA:3.10.450.50 7 155 6.6E-51 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 PANTHER PTHR41534:SF1 1 162 4.2E-99 T 26-04-2016 PAM18_RS13000 3e9dbfba2c68a89367d77e2b4a58b13d 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 9 162 2.2E-84 T 26-04-2016 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 28 6.7E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 SUPERFAMILY SSF54523 34 140 1.62E-26 T 26-04-2016 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.5E-11 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.5E-11 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 Pfam PF08334 Type II secretion system (T2SS), protein G 31 139 3.9E-33 T 26-04-2016 IPR013545 Type II secretion system protein G PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 PANTHER PTHR30093 1 139 2.0E-54 T 26-04-2016 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.1E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 Gene3D G3DSA:3.30.700.10 9 76 7.4E-5 T 26-04-2016 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 141 1.1E-57 T 26-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 PANTHER PTHR30093:SF9 1 139 2.0E-54 T 26-04-2016 PAM18_RS11810 9c22b1c61f6ee760b81ec34d88301139 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 SUPERFAMILY SSF46689 278 328 8.51E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 SMART SM00342 243 325 6.4E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 PANTHER PTHR11019 223 333 4.2E-50 T 26-04-2016 PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 199 1.4E-40 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12833 Helix-turn-helix domain 249 327 2.0E-17 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 PANTHER PTHR11019:SF140 223 333 4.2E-50 T 26-04-2016 PAM18_RS25070 2bf409278229b3150d341ddf99c95b7a 333 Gene3D G3DSA:1.10.10.60 278 329 4.2E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 Gene3D G3DSA:1.10.760.10 173 277 2.9E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 Gene3D G3DSA:1.10.760.10 27 129 1.3E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 Gene3D G3DSA:1.10.760.10 301 406 3.5E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 PANTHER PTHR35008:SF5 4 412 1.5E-234 T 26-04-2016 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 SUPERFAMILY SSF46626 300 404 3.4E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 300 383 1.0E-9 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 Pfam PF00034 Cytochrome c 31 129 8.8E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 PANTHER PTHR35008 4 412 1.5E-234 T 26-04-2016 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 SUPERFAMILY SSF46626 17 152 5.47E-21 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 PRINTS PR00605 Class IC cytochrome C signature 308 319 1.3E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 PRINTS PR00605 Class IC cytochrome C signature 361 383 1.3E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 SUPERFAMILY SSF46626 176 289 1.41E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS24090 0da4632fa7d8da107039048704809333 415 PIRSF PIRSF000018 1 415 3.7E-146 T 26-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 Gene3D G3DSA:3.40.630.10 45 240 1.3E-19 T 26-04-2016 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 PANTHER PTHR15162 1 328 4.0E-99 T 26-04-2016 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 328 1.4E-115 T 26-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 332 153.935 T 26-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 PIRSF PIRSF017020 1 332 2.9E-117 T 26-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 330 1.2E-76 T 26-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PAM18_RS21140 181cc66524596ffdeb0d291ee6caf93a 332 SUPERFAMILY SSF53187 6 329 1.69E-76 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 SUPERFAMILY SSF53850 83 293 7.78E-31 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 Pfam PF03466 LysR substrate binding domain 90 289 8.9E-27 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 PANTHER PTHR30537 1 294 2.4E-110 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 Gene3D G3DSA:1.10.10.10 6 89 2.2E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 Gene3D G3DSA:3.40.190.10 196 254 1.2E-7 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 Gene3D G3DSA:3.40.190.10 93 177 3.1E-21 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 PANTHER PTHR30537:SF26 1 294 2.4E-110 T 26-04-2016 PAM18_RS21720 09043f1d2aa174f16d9e132a7ed7d7a2 305 SUPERFAMILY SSF46785 3 86 4.36E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 52 3.4E-21 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 PANTHER PTHR34984:SF1 1 51 7.0E-24 T 26-04-2016 PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 Pfam PF02599 Global regulator protein family 1 51 7.6E-25 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 PANTHER PTHR34984 1 51 7.0E-24 T 26-04-2016 PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 SUPERFAMILY SSF117130 1 51 2.48E-18 T 26-04-2016 PAM18_RS12530 ea7f2017c978136143e9e93b800c7026 123 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 5.0E-15 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 Pfam PF00072 Response regulator receiver domain 4 115 7.3E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 Gene3D G3DSA:3.40.50.2300 2 118 9.4E-34 T 26-04-2016 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 SMART SM00421 145 202 6.3E-20 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 SUPERFAMILY SSF52172 1 128 3.42E-31 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 PANTHER PTHR26402 2 206 3.4E-70 T 26-04-2016 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 PANTHER PTHR26402:SF151 2 206 3.4E-70 T 26-04-2016 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 SMART SM00448 2 114 5.9E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 SUPERFAMILY SSF46894 137 208 7.14E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 Gene3D G3DSA:1.10.10.10 119 208 1.1E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05040 8253cddccc9401a645c7f0830acdc7ae 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 4.4E-18 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:3.30.70.20 279 326 2.3E-7 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:2.60.40.10 353 469 2.2E-32 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 PANTHER PTHR24960:SF45 3 390 2.6E-195 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 SUPERFAMILY SSF54862 103 125 7.53E-32 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 SUPERFAMILY SSF54862 172 352 7.53E-32 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Pfam PF13746 4Fe-4S dicluster domain 217 322 1.2E-45 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 PANTHER PTHR24960 3 390 2.6E-195 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:1.10.1060.10 221 278 5.3E-8 T 26-04-2016 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 39 468 7.4E-177 T 26-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Pfam PF12801 4Fe-4S binding domain 93 125 7.4E-6 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS17920 523296e87c36413c827d03aa1db6acd4 471 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 352 468 5.3E-27 T 26-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain PAM18_RS00420 2644d76f6184a3f8ec3b39920156ba30 344 PANTHER PTHR37951 1 344 4.7E-141 T 26-04-2016 PAM18_RS00420 2644d76f6184a3f8ec3b39920156ba30 344 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 131 4.9E-34 T 26-04-2016 IPR010657 ImpA, N-terminal PAM18_RS00420 2644d76f6184a3f8ec3b39920156ba30 344 PANTHER PTHR37951:SF1 1 344 4.7E-141 T 26-04-2016 PAM18_RS00420 2644d76f6184a3f8ec3b39920156ba30 344 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 340 1.2E-99 T 26-04-2016 IPR017740 Type VI secretion system-associated, ImpA PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 3.7E-50 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.6E-41 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.6E-41 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.6E-41 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 PANTHER PTHR15680 1 115 2.9E-54 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 Pfam PF01245 Ribosomal protein L19 5 114 1.9E-49 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 PIRSF PIRSF002191 1 116 8.0E-49 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 SUPERFAMILY SSF50104 2 114 2.61E-45 T 26-04-2016 IPR008991 Translation protein SH3-like domain PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.92 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06095 f4d4becb78b8492e132fdd007a6696e9 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 26-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23990 a0d6a780e6a7e3480080420593372d43 187 SUPERFAMILY SSF48498 81 167 1.44E-12 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS23990 a0d6a780e6a7e3480080420593372d43 187 Gene3D G3DSA:1.10.357.10 8 181 3.9E-17 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS23990 a0d6a780e6a7e3480080420593372d43 187 PANTHER PTHR30055 8 163 5.2E-14 T 26-04-2016 PAM18_RS23990 a0d6a780e6a7e3480080420593372d43 187 SUPERFAMILY SSF46689 23 79 2.84E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23990 a0d6a780e6a7e3480080420593372d43 187 ProSitePatterns PS00356 LacI-type HTH domain signature. 26 44 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Pfam PF08335 GlnD PII-uridylyltransferase 852 955 2.7E-12 T 26-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Pfam PF08335 GlnD PII-uridylyltransferase 317 456 2.8E-44 T 26-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 SUPERFAMILY SSF81301 549 840 9.48E-83 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Gene3D G3DSA:3.30.460.10 663 836 2.6E-58 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Gene3D G3DSA:3.30.460.10 132 305 1.5E-63 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 SUPERFAMILY SSF81301 29 306 5.07E-88 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 PANTHER PTHR30621 1 976 0.0 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 SUPERFAMILY SSF81593 840 979 1.02E-28 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 48 296 5.3E-98 T 26-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 577 830 1.1E-93 T 26-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 SUPERFAMILY SSF81593 307 456 1.18E-41 T 26-04-2016 PAM18_RS26235 e1f3b85ed284b3721d2089434a2dc0e5 982 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 45 982 19.837 T 26-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 PANTHER PTHR11122 10 304 1.5E-94 T 26-04-2016 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 Gene3D G3DSA:2.70.98.10 7 297 7.5E-75 T 26-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 PANTHER PTHR11122:SF14 10 304 1.5E-94 T 26-04-2016 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 SUPERFAMILY SSF74650 8 296 8.16E-69 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 Pfam PF01263 Aldose 1-epimerase 23 298 2.8E-62 T 26-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PAM18_RS28330 c74839bcbba214bb6605e6879c8b337a 305 PIRSF PIRSF016020 4 299 5.6E-50 T 26-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 10 232 1.2E-50 T 26-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 Gene3D G3DSA:3.40.1410.10 78 232 2.0E-39 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 Pfam PF07702 UTRA domain 92 229 1.8E-31 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 SMART SM00345 14 71 5.1E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 Gene3D G3DSA:1.10.10.10 6 75 3.1E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 SMART SM00866 92 229 3.8E-27 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PANTHER PTHR11751:SF292 120 144 1.1E-38 T 26-04-2016 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PANTHER PTHR11751:SF292 3 73 1.1E-38 T 26-04-2016 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 SUPERFAMILY SSF64288 59 232 2.67E-39 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 2.6E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 SUPERFAMILY SSF46785 6 83 4.96E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.6E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.6E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PANTHER PTHR11751 120 144 1.1E-38 T 26-04-2016 PAM18_RS08145 425ec3c4ce0e114de917059512acff75 234 PANTHER PTHR11751 3 73 1.1E-38 T 26-04-2016 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.40.50.670 720 788 6.4E-101 T 26-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.40.50.670 406 552 6.4E-101 T 26-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF54211 222 394 2.85E-57 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF56719 732 796 2.59E-88 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF56719 396 562 2.59E-88 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF55874 7 219 5.24E-75 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.30.230.10 221 394 8.6E-72 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PANTHER PTHR10169 4 555 0.0 T 26-04-2016 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PANTHER PTHR10169 726 806 0.0 T 26-04-2016 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 795 2.8E-30 T 26-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 1.8E-83 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF00204 DNA gyrase B 222 392 7.7E-57 T 26-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 101.231 T 26-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF01751 Toprim domain 421 533 1.0E-17 T 26-04-2016 IPR006171 Toprim domain PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 176 4.7E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 6.3E-303 T 26-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SMART SM00433 37 799 7.5E-272 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 26-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 9.7E-72 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 SMART SM00387 33 177 2.5E-30 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00020 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.30.565.10 7 219 2.1E-90 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF01619 Proline dehydrogenase 197 496 1.1E-94 T 26-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:1.10.2060.10 69 188 8.4E-50 T 26-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF51730 190 540 4.32E-114 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 2.0E-45 T 26-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 PANTHER PTHR11699:SF212 547 1043 6.8E-236 T 26-04-2016 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF00171 Aldehyde dehydrogenase family 583 1037 2.1E-115 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 841 852 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 533 1037 5.5E-212 T 26-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF53720 553 1042 1.2E-127 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 PANTHER PTHR11699 547 1043 6.8E-236 T 26-04-2016 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.40.605.10 579 828 1.5E-72 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF81935 19 189 1.83E-62 T 26-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 PIRSF PIRSF000197 4 1057 0.0 T 26-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.20.20.220 190 539 1.9E-107 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like PAM18_RS21730 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.40.309.10 829 1015 3.8E-45 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS03880 fee7f5c373e36174b32b7d1e6ab8dcb3 247 SUPERFAMILY SSF53335 6 246 3.23E-38 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03880 fee7f5c373e36174b32b7d1e6ab8dcb3 247 Gene3D G3DSA:3.40.50.150 6 246 1.6E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03880 fee7f5c373e36174b32b7d1e6ab8dcb3 247 Pfam PF13649 Methyltransferase domain 45 135 1.7E-11 T 26-04-2016 PAM18_RS03880 fee7f5c373e36174b32b7d1e6ab8dcb3 247 PANTHER PTHR10108 1 151 2.9E-42 T 26-04-2016 PAM18_RS03880 fee7f5c373e36174b32b7d1e6ab8dcb3 247 PANTHER PTHR10108:SF820 1 151 2.9E-42 T 26-04-2016 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Gene3D G3DSA:3.40.47.10 194 274 4.7E-70 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Gene3D G3DSA:3.40.47.10 3 123 4.7E-70 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 SUPERFAMILY SSF53901 269 390 1.73E-40 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 PANTHER PTHR18919 1 391 3.2E-232 T 26-04-2016 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.5E-88 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Gene3D G3DSA:3.40.47.10 275 390 7.5E-55 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Gene3D G3DSA:3.40.47.10 142 193 7.5E-55 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 SUPERFAMILY SSF53901 3 268 7.52E-81 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 PIRSF PIRSF000429 1 391 1.4E-113 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 PANTHER PTHR18919:SF110 1 391 3.2E-232 T 26-04-2016 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 4.9E-40 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.3E-128 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS05155 af0e6ef1d173e92d08de083246681d09 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 PIRSF PIRSF000337 2 448 1.7E-145 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 SUPERFAMILY SSF51679 1 440 1.7E-127 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 Gene3D G3DSA:3.20.20.30 2 315 1.6E-132 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 Gene3D G3DSA:3.20.20.30 352 440 1.6E-132 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 1.8E-170 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 PANTHER PTHR30011:SF16 1 453 2.2E-268 T 26-04-2016 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 PANTHER PTHR30011 1 453 2.2E-268 T 26-04-2016 PAM18_RS13960 337d2f783c7008c4d3626f7cbf5742de 469 Pfam PF00296 Luciferase-like monooxygenase 27 389 5.3E-52 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:1.10.10.10 1 52 8.4E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF54909 63 136 8.04E-14 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 26-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:3.30.70.920 54 128 3.3E-16 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 PANTHER PTHR30154:SF2 1 155 3.7E-58 T 26-04-2016 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 SMART SM00344 1 107 1.7E-32 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 3.5E-12 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF46785 1 60 3.38E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 PANTHER PTHR30154 1 155 3.7E-58 T 26-04-2016 PAM18_RS25055 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.1E-16 T 26-04-2016 PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 309 2.4E-95 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 PANTHER PTHR30024:SF3 1 325 1.5E-166 T 26-04-2016 PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 Gene3D G3DSA:3.40.190.10 107 214 5.7E-24 T 26-04-2016 PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 Pfam PF09084 NMT1/THI5 like 64 242 3.0E-18 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 SMART SM00062 28 240 8.0E-4 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 PANTHER PTHR30024 1 325 1.5E-166 T 26-04-2016 PAM18_RS12220 68fba3041c8270a389e7892887443edf 328 SUPERFAMILY SSF53850 39 254 1.85E-46 T 26-04-2016 PAM18_RS18275 21e58aaaaa9c80db9fab2bf3cd7a899e 370 PANTHER PTHR22893 1 367 3.3E-250 T 26-04-2016 PAM18_RS18275 21e58aaaaa9c80db9fab2bf3cd7a899e 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 342 1.9E-89 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS18275 21e58aaaaa9c80db9fab2bf3cd7a899e 370 SUPERFAMILY SSF51395 2 365 1.53E-121 T 26-04-2016 PAM18_RS18275 21e58aaaaa9c80db9fab2bf3cd7a899e 370 PANTHER PTHR22893:SF24 1 367 3.3E-250 T 26-04-2016 PAM18_RS18275 21e58aaaaa9c80db9fab2bf3cd7a899e 370 Gene3D G3DSA:3.20.20.70 2 364 5.7E-132 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 SMART SM00342 170 252 3.2E-16 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 9.2E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 9.2E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 SUPERFAMILY SSF51182 10 179 1.41E-20 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 Gene3D G3DSA:1.10.10.60 171 205 7.6E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 Gene3D G3DSA:1.10.10.60 215 253 8.2E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 PANTHER PTHR11019 1 260 4.3E-151 T 26-04-2016 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 PANTHER PTHR11019:SF138 1 260 4.3E-151 T 26-04-2016 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 Pfam PF12833 Helix-turn-helix domain 176 252 2.0E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 Pfam PF02311 AraC-like ligand binding domain 25 118 3.2E-8 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 Gene3D G3DSA:2.60.120.10 8 86 4.2E-12 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 248 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS21680 1fa7b3d3e654f17a23a1a25140f74dc2 262 SUPERFAMILY SSF46689 211 254 5.82E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04605 bd27c34d276988fc4748b98e423aba7c 333 Pfam PF04773 FecR protein 90 184 1.4E-15 T 26-04-2016 IPR006860 FecR protein PAM18_RS04605 bd27c34d276988fc4748b98e423aba7c 333 PIRSF PIRSF029644 1 333 4.5E-107 T 26-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 PAM18_RS02605 ff6497435549fb0aae81c4a429249628 150 Gene3D G3DSA:1.10.10.10 1 52 1.0E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02605 ff6497435549fb0aae81c4a429249628 150 Pfam PF13404 AsnC-type helix-turn-helix domain 1 45 7.4E-9 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS02605 ff6497435549fb0aae81c4a429249628 150 PANTHER PTHR30154 1 149 6.1E-71 T 26-04-2016 PAM18_RS02605 ff6497435549fb0aae81c4a429249628 150 PANTHER PTHR30154:SF21 1 149 6.1E-71 T 26-04-2016 PAM18_RS02605 ff6497435549fb0aae81c4a429249628 150 SMART SM00344 1 108 0.0061 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 PANTHER PTHR23151:SF68 21 547 1.3E-269 T 26-04-2016 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF51230 5 93 6.15E-23 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 318 546 2.8E-76 T 26-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:2.40.50.100 5 79 6.8E-25 T 26-04-2016 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:2.40.50.100 121 196 5.8E-23 T 26-04-2016 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00364 Biotin-requiring enzyme 5 74 3.4E-23 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00364 Biotin-requiring enzyme 121 192 1.7E-23 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 4 547 1.2E-266 T 26-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF02817 e3 binding domain 247 282 5.5E-15 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF52777 306 547 1.25E-79 T 26-04-2016 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 PANTHER PTHR23151 21 547 1.3E-269 T 26-04-2016 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:4.10.320.10 243 291 2.1E-19 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF51230 118 212 6.41E-23 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:3.30.559.10 308 547 6.2E-81 T 26-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PAM18_RS26245 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF47005 242 286 4.97E-12 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 Pfam PF13180 PDZ domain 280 370 2.3E-15 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 5.6E-54 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 Gene3D G3DSA:2.30.42.10 282 375 7.4E-26 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PANTHER PTHR22939 5 375 4.4E-196 T 26-04-2016 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 SMART SM00228 280 362 1.3E-12 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 SUPERFAMILY SSF50156 238 363 1.71E-22 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 Pfam PF13365 Trypsin-like peptidase domain 107 241 3.4E-30 T 26-04-2016 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 SUPERFAMILY SSF50494 51 272 6.4E-63 T 26-04-2016 IPR009003 Peptidase S1, PA clan PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 Gene3D G3DSA:2.40.10.10 54 168 7.2E-35 T 26-04-2016 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 Gene3D G3DSA:2.40.10.10 169 281 4.7E-44 T 26-04-2016 PAM18_RS23180 d66c1fe1bab2f94c34632873d8fcabab 389 PANTHER PTHR22939:SF93 5 375 4.4E-196 T 26-04-2016 PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 Pfam PF04350 Pilus assembly protein, PilO 58 202 2.1E-56 T 26-04-2016 IPR007445 Pilus assembly protein, PilO PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 PANTHER PTHR39555 9 203 3.6E-65 T 26-04-2016 PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 Gene3D G3DSA:1.10.287.540 66 102 3.7E-20 T 26-04-2016 IPR023218 UPF0291 structural domain PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 PIRSF PIRSF016482 1 206 1.4E-92 T 26-04-2016 IPR007445 Pilus assembly protein, PilO PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 Gene3D G3DSA:3.30.70.60 103 204 5.2E-38 T 26-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PAM18_RS26375 c2d5f77a7fc554dbda38a276d6770d0e 207 PANTHER PTHR39555:SF1 9 203 3.6E-65 T 26-04-2016 PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 PANTHER PTHR30160:SF13 4 315 2.4E-95 T 26-04-2016 PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 SUPERFAMILY SSF52540 53 191 7.53E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 313 2.7E-79 T 26-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 Gene3D G3DSA:3.40.50.300 50 107 7.9E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 Gene3D G3DSA:3.40.50.300 142 151 7.9E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 331 39.24 T 26-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 1.3E-106 T 26-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 PAM18_RS10170 e9fe797aa18609ccd8c92bc5d6fa88be 332 PANTHER PTHR30160 4 315 2.4E-95 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.10.20.30 387 448 6.5E-22 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Pfam PF02824 TGS domain 388 447 2.4E-19 T 26-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.460.10 178 325 1.3E-46 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81301 181 392 1.36E-61 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 4.8E-245 T 26-04-2016 IPR004811 RelA/SpoT family GO:0015969 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SMART SM00471 41 153 6.0E-8 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.7E-37 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SMART SM00954 235 345 1.2E-64 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81271 375 447 1.72E-22 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 PANTHER PTHR21262:SF0 2 701 0.0 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 PANTHER PTHR21262 2 701 0.0 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Pfam PF13291 ACT domain 622 698 4.4E-16 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Pfam PF13328 HD domain 26 175 1.0E-51 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.70.260 624 696 4.0E-8 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF109604 6 191 1.44E-70 T 26-04-2016 PAM18_RS27885 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF55021 624 699 1.93E-7 T 26-04-2016 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 Pfam PF00892 EamA-like transporter family 21 152 1.7E-24 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 Pfam PF00892 EamA-like transporter family 165 298 3.3E-16 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 PANTHER PTHR32322:SF12 9 310 8.7E-193 T 26-04-2016 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 PANTHER PTHR32322 9 310 8.7E-193 T 26-04-2016 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 SUPERFAMILY SSF103481 53 156 1.44E-14 T 26-04-2016 PAM18_RS15095 9b81afdd167b3c39e9b1795196fec189 310 SUPERFAMILY SSF103481 204 301 3.92E-7 T 26-04-2016 PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 SMART SM00491 562 695 1.1E-29 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Pfam PF00270 DEAD/DEAH box helicase 58 102 2.9E-5 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Pfam PF13307 Helicase C-terminal domain 553 708 6.6E-34 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 516 689 8.54E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 475 489 8.54E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 57 105 8.54E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 208 283 8.54E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 PANTHER PTHR11472 1 712 0.0 T 26-04-2016 PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 535 690 1.2E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 227 284 8.5E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 56 130 8.5E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 176 177 8.5E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20425 244417ba132609a70f0fbe4822514b12 714 PANTHER PTHR11472:SF32 1 712 0.0 T 26-04-2016 PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 PANTHER PTHR33375 1 290 1.7E-108 T 26-04-2016 PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 Gene3D G3DSA:1.10.260.40 138 171 8.5E-4 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 204 7.1E-64 T 26-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 Gene3D G3DSA:3.90.1530.10 28 133 1.2E-42 T 26-04-2016 PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 Pfam PF02195 ParB-like nuclease domain 38 127 3.3E-30 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 SMART SM00470 37 127 5.3E-39 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS29080 effd85c900a7298e9b23fb905aeb499c 290 SUPERFAMILY SSF110849 36 180 1.2E-34 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 PANTHER PTHR19211 3 554 0.0 T 26-04-2016 PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SUPERFAMILY SSF52540 302 530 3.28E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SUPERFAMILY SSF52540 13 244 2.8E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF12848 ABC transporter 230 304 6.3E-11 T 26-04-2016 IPR032781 ABC-transporter extension domain PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SMART SM00382 348 522 2.3E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SMART SM00382 31 240 8.2E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF00005 ABC transporter 22 191 3.8E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF00005 ABC transporter 340 473 1.0E-22 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.9E-296 T 26-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 126 272 6.2E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 8 93 6.2E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 322 537 9.1E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23960 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 PANTHER PTHR19211:SF7 3 554 0.0 T 26-04-2016 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF52096 2 308 8.83E-70 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 9.3E-27 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 26-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.90.226.10 5 210 8.9E-60 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 PANTHER PTHR23309 8 715 0.0 T 26-04-2016 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 26-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 2.9E-61 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 212 8.2E-40 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.40.50.720 311 498 5.2E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 622 714 6.29E-24 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 PANTHER PTHR23309:SF18 8 715 0.0 T 26-04-2016 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.229 T 26-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:1.10.1040.10 633 713 1.7E-14 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 496 616 3.57E-29 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF51735 314 496 1.76E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10000 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:1.10.1040.10 499 593 1.0E-21 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 4.7E-54 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Gene3D G3DSA:3.30.160.110 114 148 4.0E-19 T 26-04-2016 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 PANTHER PTHR21091:SF16 166 455 4.0E-87 T 26-04-2016 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Gene3D G3DSA:3.40.1010.10 216 332 1.1E-47 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 SUPERFAMILY SSF53790 214 459 3.27E-84 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 SUPERFAMILY SSF75615 114 210 2.62E-28 T 26-04-2016 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Pfam PF13241 Putative NAD(P)-binding 6 115 3.8E-28 T 26-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 6.6E-89 T 26-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Gene3D G3DSA:3.30.950.10 333 459 4.8E-53 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 26-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 54.716 T 26-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 4.1E-96 T 26-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Gene3D G3DSA:1.10.8.210 151 209 6.0E-23 T 26-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 PIRSF PIRSF036426 1 465 4.2E-210 T 26-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 2.1E-7 T 26-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 PANTHER PTHR21091 166 455 4.0E-87 T 26-04-2016 PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 SUPERFAMILY SSF51735 1 113 1.07E-27 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Gene3D G3DSA:3.40.50.720 1 113 6.2E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12140 decb036b72b4b11702f326197bec6467 465 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 4.5E-22 T 26-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 ProSitePatterns PS00483 Dihydroorotase signature 2. 307 318 - T 26-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 SUPERFAMILY SSF51338 1 54 6.81E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 SUPERFAMILY SSF51338 371 433 6.81E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 Gene3D G3DSA:2.30.40.10 4 69 8.0E-20 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 SUPERFAMILY SSF51556 55 371 1.02E-90 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 PANTHER PTHR11647:SF1 1 432 1.9E-145 T 26-04-2016 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 Pfam PF01979 Amidohydrolase family 51 125 5.8E-6 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 Pfam PF01979 Amidohydrolase family 231 425 1.2E-5 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 Gene3D G3DSA:3.20.20.140 70 409 1.1E-93 T 26-04-2016 PAM18_RS28940 e381e29efba5a8be5809a7988c3aa948 445 PANTHER PTHR11647 1 432 1.9E-145 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 Gene3D G3DSA:3.40.190.10 178 267 8.7E-35 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.8E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 Gene3D G3DSA:3.40.190.10 92 177 8.2E-23 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 PANTHER PTHR30346:SF0 1 300 4.2E-107 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 Pfam PF03466 LysR substrate binding domain 88 293 3.4E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 PANTHER PTHR30346 1 300 4.2E-107 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 SUPERFAMILY SSF53850 90 295 2.04E-36 T 26-04-2016 PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 SUPERFAMILY SSF46785 3 86 1.33E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16485 7d83dbf93db2c012ef2f70c8cc9c2f36 301 Gene3D G3DSA:1.10.10.10 2 87 2.2E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 PIRSF PIRSF036298 1 304 1.8E-160 T 26-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF13247 4Fe-4S dicluster domain 88 184 1.4E-24 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 PANTHER PTHR11938:SF84 3 201 1.8E-108 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF09163 Formate dehydrogenase N, transmembrane 242 284 2.9E-23 T 26-04-2016 IPR015246 Formate dehydrogenase, transmembrane PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 149 248 2.2E-28 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 5 286 1.7E-143 T 26-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:1.20.5.480 249 288 8.3E-23 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 107 148 1.5E-21 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 PANTHER PTHR11938 3 201 1.8E-108 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF12800 4Fe-4S binding domain 33 45 0.077 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 SUPERFAMILY SSF54862 24 265 2.62E-70 T 26-04-2016 PAM18_RS25190 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 28 106 1.3E-12 T 26-04-2016 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.90.1170.50 26 147 1.8E-37 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 782 0.0 T 26-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 459 614 4.1E-56 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 SUPERFAMILY SSF54665 24 148 5.63E-38 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 PANTHER PTHR11908:SF66 24 785 0.0 T 26-04-2016 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 SMART SM01008 40 147 4.8E-38 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 SUPERFAMILY SSF56003 148 780 1.57E-208 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 195 289 1.1E-32 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 625 780 1.2E-88 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 367 458 1.2E-88 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 291 366 1.0E-25 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Gene3D G3DSA:3.30.365.10 148 194 1.0E-25 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 710 6.0E-211 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 146 5.3E-22 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS18060 5933abd3a36d5d72d1f0a543ba822a35 799 PANTHER PTHR11908 24 785 0.0 T 26-04-2016 PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 Pfam PF01614 Bacterial transcriptional regulator 134 253 3.2E-10 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 SUPERFAMILY SSF46785 15 86 4.17E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 SUPERFAMILY SSF55781 73 255 6.54E-26 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 SMART SM00346 15 104 1.7E-12 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 Pfam PF09339 IclR helix-turn-helix domain 17 65 1.4E-12 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 Gene3D G3DSA:3.30.450.40 92 255 2.0E-27 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 PANTHER PTHR30136:SF7 11 266 2.7E-85 T 26-04-2016 PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 PANTHER PTHR30136 11 266 2.7E-85 T 26-04-2016 PAM18_RS20585 5c1815706a85e176da0764fecb9cacf8 266 Gene3D G3DSA:1.10.10.10 14 83 4.8E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 SUPERFAMILY SSF53697 2 193 3.03E-58 T 26-04-2016 PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 Gene3D G3DSA:3.40.50.10490 2 194 6.1E-63 T 26-04-2016 PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 PANTHER PTHR30390 3 197 1.1E-125 T 26-04-2016 PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 Pfam PF13580 SIS domain 15 146 1.3E-35 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.873 T 26-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 PAM18_RS23075 e0faa9e547b3acea6f5fb48ca75ece89 197 PANTHER PTHR30390:SF5 3 197 1.1E-125 T 26-04-2016 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 SUPERFAMILY SSF46689 191 242 6.53E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 Gene3D G3DSA:1.10.10.60 246 289 5.1E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 Gene3D G3DSA:1.10.10.60 191 245 1.1E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 SMART SM00342 208 291 7.7E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 SUPERFAMILY SSF46689 244 291 3.67E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 PANTHER PTHR11019 1 295 2.2E-156 T 26-04-2016 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 179 6.5E-44 T 26-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 PANTHER PTHR11019:SF134 1 295 2.2E-156 T 26-04-2016 PAM18_RS14205 c8db6f1030157a88ecc708964e33729b 296 Pfam PF12833 Helix-turn-helix domain 214 289 8.3E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 SUPERFAMILY SSF55073 235 392 5.1E-43 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 PANTHER PTHR10799:SF750 185 401 4.2E-63 T 26-04-2016 PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 388 2.9E-41 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 392 4.6E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 Gene3D G3DSA:3.30.70.270 232 393 3.0E-47 T 26-04-2016 PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 SMART SM00267 219 393 1.3E-50 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS16350 1af61299736590195a2c21de29ca8c8c 401 PANTHER PTHR10799 185 401 4.2E-63 T 26-04-2016 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 61 166 1.1E-29 T 26-04-2016 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:1.10.260.40 2 60 1.9E-23 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF47413 2 58 1.41E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 329 2.6E-132 T 26-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 PANTHER PTHR30146:SF25 1 329 3.2E-202 T 26-04-2016 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 SMART SM00354 1 73 1.8E-28 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 246 1.6E-20 T 26-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 167 328 7.5E-33 T 26-04-2016 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 3.6E-18 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF53822 60 315 2.94E-52 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS07330 37f1137a4964c7c016bbfa80b74e4786 329 PANTHER PTHR30146 1 329 3.2E-202 T 26-04-2016 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 271 282 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 347 358 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 137 153 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 289 316 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 91 102 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 338 347 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 190 212 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 154 169 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PRINTS PR00359 B-class P450 signature 317 332 5.7E-51 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 PANTHER PTHR11712 37 397 1.7E-100 T 26-04-2016 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 SUPERFAMILY SSF48264 27 397 1.19E-91 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 Gene3D G3DSA:1.10.630.10 11 397 1.5E-116 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS08395 ce8420b90a1ec356bfcc04e6a8fcb052 418 Pfam PF00067 Cytochrome P450 148 368 5.0E-18 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS05100 20937510944275851098ed62954bd555 272 PANTHER PTHR30151:SF0 16 271 6.7E-114 T 26-04-2016 PAM18_RS05100 20937510944275851098ed62954bd555 272 Gene3D G3DSA:1.10.3720.10 75 269 8.6E-29 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05100 20937510944275851098ed62954bd555 272 PANTHER PTHR30151 16 271 6.7E-114 T 26-04-2016 PAM18_RS05100 20937510944275851098ed62954bd555 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 268 1.1E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05100 20937510944275851098ed62954bd555 272 SUPERFAMILY SSF161098 76 261 6.8E-36 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.8E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.8E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF48498 76 174 2.36E-23 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.10.60 2 59 8.2E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 PANTHER PTHR30055:SF59 1 180 2.9E-75 T 26-04-2016 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.2E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF46689 1 71 2.31E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.357.10 60 176 1.8E-28 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS11300 c0060837d1537e54bec55cd833a15b27 193 PANTHER PTHR30055 1 180 2.9E-75 T 26-04-2016 PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 Pfam PF00226 DnaJ domain 190 245 2.8E-8 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 Gene3D G3DSA:1.10.287.110 179 245 7.0E-11 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 SMART SM00271 185 250 2.3E-10 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 PRINTS PR00625 DnaJ domain signature 188 206 2.7E-6 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 PRINTS PR00625 DnaJ domain signature 206 221 2.7E-6 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 PRINTS PR00625 DnaJ domain signature 230 250 2.7E-6 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 SUPERFAMILY SSF158682 21 175 1.7E-11 T 26-04-2016 IPR029024 TerB-like PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 Gene3D G3DSA:1.10.3680.10 21 174 9.9E-9 T 26-04-2016 IPR029024 TerB-like PAM18_RS03030 b728bfbc4944a8f22c0c5f442c973260 252 SUPERFAMILY SSF46565 130 244 3.79E-18 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 2.6E-14 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615 1 288 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615 348 599 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615 646 832 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 SUPERFAMILY SSF50692 690 829 4.14E-42 T 26-04-2016 IPR009010 Aspartate decarboxylase-like domain PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF00384 Molybdopterin oxidoreductase 98 571 1.6E-86 T 26-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 26-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615:SF123 1 288 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615:SF123 348 599 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 PANTHER PTHR11615:SF123 646 832 0.0 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF01568 Molydopterin dinucleotide binding domain 717 825 5.9E-25 T 26-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Hamap MF_01630 Nitrate reductase [napA]. 1 831 29.255 T 26-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 SMART SM00926 41 95 4.3E-9 T 26-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:2.20.25.90 42 96 7.8E-16 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:2.40.40.20 707 829 3.5E-46 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.50.740 401 578 1.5E-78 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.50.740 624 667 1.5E-78 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.50.740 98 180 1.5E-78 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.228.10 328 400 1.4E-52 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.228.10 181 293 1.4E-52 T 26-04-2016 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 829 0.0 T 26-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 PAM18_RS19720 d9a0e9538c99708e393ecc48f3e729d8 834 SUPERFAMILY SSF53706 37 648 3.01E-201 T 26-04-2016 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 SUPERFAMILY SSF118116 442 631 2.62E-62 T 26-04-2016 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Pfam PF08676 MutL C terminal dimerisation domain 442 589 1.9E-51 T 26-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Gene3D G3DSA:3.30.565.10 6 214 1.3E-74 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 PANTHER PTHR10073 7 629 2.9E-177 T 26-04-2016 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 SUPERFAMILY SSF55874 5 206 1.83E-54 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Gene3D G3DSA:3.30.230.10 221 333 2.5E-40 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 126 4.6E-9 T 26-04-2016 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 SMART SM00853 446 589 4.9E-57 T 26-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 26-04-2016 IPR014762 DNA mismatch repair, conserved site PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 333 1.5E-40 T 26-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 SMART SM01340 216 334 8.4E-63 T 26-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 5 629 29.842 T 26-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 314 3.3E-100 T 26-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 PAM18_RS25885 e53a8e93988960d591afb0a6302b6afa 633 SUPERFAMILY SSF54211 195 334 8.34E-41 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS05635 b06ea793df36cbe79f9fc0486cae2874 355 PANTHER PTHR33529:SF1 1 354 2.0E-148 T 26-04-2016 PAM18_RS05635 b06ea793df36cbe79f9fc0486cae2874 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 1.2E-66 T 26-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PAM18_RS05635 b06ea793df36cbe79f9fc0486cae2874 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 2.5E-130 T 26-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 PAM18_RS05635 b06ea793df36cbe79f9fc0486cae2874 355 PANTHER PTHR33529 1 354 2.0E-148 T 26-04-2016 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 7.3E-12 T 26-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 PANTHER PTHR10681:SF99 3 207 1.2E-88 T 26-04-2016 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 SUPERFAMILY SSF52833 3 209 1.88E-69 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 Pfam PF00578 AhpC/TSA family 6 135 3.5E-31 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 Gene3D G3DSA:3.40.30.10 4 157 1.0E-61 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 PIRSF PIRSF000239 1 209 8.1E-79 T 26-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 Gene3D G3DSA:3.30.1020.10 158 211 1.7E-29 T 26-04-2016 PAM18_RS07790 076fa5431409778ee533e8aa9d6055d2 212 PANTHER PTHR10681 3 207 1.2E-88 T 26-04-2016 PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.4E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 PANTHER PTHR11751 6 101 3.4E-43 T 26-04-2016 PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 PANTHER PTHR11751:SF436 6 101 3.4E-43 T 26-04-2016 PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.20.120.530 79 218 1.4E-42 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.10.10.10 10 76 2.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF07729 FCD domain 85 204 2.7E-28 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF48008 82 215 6.54E-28 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00345 17 75 3.9E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF46785 12 79 8.52E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19230 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00895 85 206 1.2E-19 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 Gene3D G3DSA:2.30.40.10 3 69 5.3E-13 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 PANTHER PTHR11647 1 422 3.0E-155 T 26-04-2016 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 Gene3D G3DSA:3.20.20.140 70 384 1.4E-87 T 26-04-2016 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 4.6E-88 T 26-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 Pfam PF01979 Amidohydrolase family 198 419 1.5E-13 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 SUPERFAMILY SSF51556 56 367 4.4E-88 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 32.277 T 26-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 SUPERFAMILY SSF51338 367 422 4.32E-24 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 SUPERFAMILY SSF51338 1 55 4.32E-24 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02030 fd05f30aabedb0516916854499c84bb6 423 PANTHER PTHR11647:SF70 1 422 3.0E-155 T 26-04-2016 PAM18_RS17505 d712c2272dc973fe4ed746fc72187f29 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 28 1.4E-8 T 26-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PAM18_RS17505 d712c2272dc973fe4ed746fc72187f29 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 7.5E-11 T 26-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 PANTHER PTHR22926 2 360 6.0E-185 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 PANTHER PTHR22926:SF5 2 360 6.0E-185 T 26-04-2016 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.643 T 26-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 4.8E-5 T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.9E-141 T 26-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23025 68fa3879119b1156c358e505e8e16484 360 Pfam PF00953 Glycosyl transferase family 4 99 284 9.4E-37 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 444 1.5E-194 T 26-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 Gene3D G3DSA:3.40.50.300 130 400 2.3E-90 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 PANTHER PTHR15184 5 446 8.8E-235 T 26-04-2016 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 SMART SM00382 167 350 6.9E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 PANTHER PTHR15184:SF9 5 446 8.8E-235 T 26-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 SUPERFAMILY SSF52540 103 372 2.08E-96 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 366 8.2E-74 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS20070 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 27 446 1.1E-171 T 26-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS15040 234c135f15329d703e49670c812a02cd 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 247 43.512 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS15040 234c135f15329d703e49670c812a02cd 247 PANTHER PTHR30292:SF0 1 247 6.2E-125 T 26-04-2016 PAM18_RS15040 234c135f15329d703e49670c812a02cd 247 PANTHER PTHR30292 1 247 6.2E-125 T 26-04-2016 PAM18_RS15040 234c135f15329d703e49670c812a02cd 247 Pfam PF03746 LamB/YcsF family 6 245 2.4E-96 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS15040 234c135f15329d703e49670c812a02cd 247 SUPERFAMILY SSF88713 5 246 1.33E-93 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS25585 9837704bdd221113ee0d147cfe0bc7c0 362 PANTHER PTHR19353:SF34 1 361 5.6E-163 T 26-04-2016 PAM18_RS25585 9837704bdd221113ee0d147cfe0bc7c0 362 Pfam PF00487 Fatty acid desaturase 64 332 1.1E-30 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS25585 9837704bdd221113ee0d147cfe0bc7c0 362 PANTHER PTHR19353 1 361 5.6E-163 T 26-04-2016 PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PANTHER PTHR24322:SF328 13 139 9.6E-55 T 26-04-2016 PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PANTHER PTHR24322:SF328 157 189 9.6E-55 T 26-04-2016 PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 193 0.0028 T 26-04-2016 PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.7E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PANTHER PTHR24322 13 139 9.6E-55 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PANTHER PTHR24322 157 189 9.6E-55 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 5.5E-56 T 26-04-2016 PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 Gene3D G3DSA:3.40.50.720 9 250 1.0E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 SUPERFAMILY SSF51735 9 250 7.04E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16480 a06b56523ac4bc7db67ca88ae0ae34fe 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 SUPERFAMILY SSF51366 4 217 7.85E-76 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 4.6E-99 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 PIRSF PIRSF001461 1 224 6.4E-103 T 26-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 PANTHER PTHR11749:SF7 2 222 3.2E-140 T 26-04-2016 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.8E-89 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 Gene3D G3DSA:3.20.20.70 2 222 1.1E-94 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS03075 66d94483da397e4f92f50c44fae48e39 224 PANTHER PTHR11749 2 222 3.2E-140 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 SUPERFAMILY SSF144091 82 285 7.46E-36 T 26-04-2016 PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 Pfam PF16733 Rhomboid N-terminal domain 2 68 2.6E-32 T 26-04-2016 IPR031976 Rhomboid protease, N-terminal PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 Pfam PF01694 Rhomboid family 136 277 1.1E-29 T 26-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 Gene3D G3DSA:1.20.1540.10 85 276 4.8E-31 T 26-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 PANTHER PTHR22936 139 286 1.6E-52 T 26-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 PAM18_RS09650 14fff67fc2784b2ada72181fd6e31de0 286 PANTHER PTHR22936:SF30 139 286 1.6E-52 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PANTHER PTHR11963:SF13 7 495 6.3E-234 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 Gene3D G3DSA:3.40.630.10 170 493 7.8E-142 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 1.1E-53 T 26-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.1E-53 T 26-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 1.1E-53 T 26-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 1.1E-53 T 26-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 1.1E-53 T 26-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 41.331 T 26-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-31 T 26-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 26-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 SUPERFAMILY SSF52949 1 182 3.3E-44 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 486 6.0E-121 T 26-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 Gene3D G3DSA:3.40.220.10 1 159 2.0E-54 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 SUPERFAMILY SSF53187 177 493 4.39E-126 T 26-04-2016 PAM18_RS05615 95f09930d4c0a4ac6f3e11f924e81d95 495 PANTHER PTHR11963 7 495 6.3E-234 T 26-04-2016 PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 SMART SM00382 26 212 3.9E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 PANTHER PTHR24220:SF568 3 232 2.8E-136 T 26-04-2016 PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 SUPERFAMILY SSF52540 2 231 2.02E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 Pfam PF00005 ABC transporter 17 161 3.1E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 Gene3D G3DSA:3.40.50.300 1 229 1.3E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 PANTHER PTHR24220 3 232 2.8E-136 T 26-04-2016 PAM18_RS20295 8d747360fbc9aafe721718c73b011817 233 PIRSF PIRSF039137 1 233 3.0E-104 T 26-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 318 526 2.7E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 132 281 8.4E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 3 100 8.4E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 18 184 7.0E-18 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 336 465 1.3E-20 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 344 511 9.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 26 245 2.4E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 PANTHER PTHR19211:SF38 1 525 0.0 T 26-04-2016 PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF12848 ABC transporter 224 308 4.5E-21 T 26-04-2016 IPR032781 ABC-transporter extension domain PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 6 237 7.93E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 297 526 2.06E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15795 f700d94bb9faec3b04df0bcb0e13c43e 529 PANTHER PTHR19211 1 525 0.0 T 26-04-2016 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 SMART SM00862 156 232 2.1E-13 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 5.7E-17 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 PANTHER PTHR26402 11 234 2.1E-138 T 26-04-2016 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 Pfam PF00072 Response regulator receiver domain 14 120 1.7E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 PANTHER PTHR26402:SF545 11 234 2.1E-138 T 26-04-2016 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 SUPERFAMILY SSF52172 9 190 3.7E-36 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 Gene3D G3DSA:3.40.50.2300 10 156 1.9E-35 T 26-04-2016 PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 Gene3D G3DSA:1.10.10.10 157 234 3.2E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11750 9a533a823b7af1358efcee5c1a688245 238 SMART SM00448 11 121 5.2E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17630 82451d9b9cfbce02c67044fbd97e4f87 146 Pfam PF01638 HxlR-like helix-turn-helix 20 104 2.7E-19 T 26-04-2016 IPR002577 Helix-turn-helix, HxlR type PAM18_RS17630 82451d9b9cfbce02c67044fbd97e4f87 146 Gene3D G3DSA:1.10.10.10 2 111 2.2E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17630 82451d9b9cfbce02c67044fbd97e4f87 146 PANTHER PTHR33204:SF3 1 145 1.5E-105 T 26-04-2016 PAM18_RS17630 82451d9b9cfbce02c67044fbd97e4f87 146 SUPERFAMILY SSF46785 6 143 9.66E-39 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17630 82451d9b9cfbce02c67044fbd97e4f87 146 PANTHER PTHR33204 1 145 1.5E-105 T 26-04-2016 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF00691 OmpA family 244 339 2.0E-24 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:4.10.1080.10 201 243 2.2E-7 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 274 289 7.44E-18 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 244 266 7.44E-18 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 289 305 7.44E-18 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF56925 45 188 6.54E-17 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:3.30.1330.60 244 345 5.7E-42 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF05736 OprF membrane domain 1 188 2.1E-97 T 26-04-2016 IPR008722 Outer membrane porin F, N-terminal PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103647 198 232 4.84E-7 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 PANTHER PTHR30128 119 348 2.0E-67 T 26-04-2016 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 ProSitePatterns PS01068 OmpA-like domain. 276 321 - T 26-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103088 235 345 3.27E-39 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 PANTHER PTHR30128:SF10 119 348 2.0E-67 T 26-04-2016 PAM18_RS16765 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:2.40.160.20 44 157 1.2E-16 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 SMART SM00382 34 220 9.2E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 Pfam PF00005 ABC transporter 25 171 9.5E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 Gene3D G3DSA:3.40.50.300 5 224 5.5E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 PANTHER PTHR24220:SF509 7 227 4.7E-112 T 26-04-2016 PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 SUPERFAMILY SSF52540 5 223 4.33E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10800 6f38a9eb804f5c394c65049cd37ee09c 227 PANTHER PTHR24220 7 227 4.7E-112 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 8.6E-24 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 8.6E-24 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 8.6E-24 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 8.6E-24 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 SMART SM00998 366 445 2.4E-25 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 SUPERFAMILY SSF48557 11 444 4.56E-115 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 444 5.4E-98 T 26-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PANTHER PTHR11444 5 457 6.7E-283 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 Gene3D G3DSA:1.10.40.30 373 443 2.8E-24 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 Pfam PF00206 Lyase 18 297 1.1E-40 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 Gene3D G3DSA:1.20.200.10 105 372 3.4E-81 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PANTHER PTHR11444:SF26 5 457 6.7E-283 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.4E-10 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.4E-10 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.4E-10 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.4E-10 T 26-04-2016 PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 Gene3D G3DSA:1.10.275.10 6 104 1.9E-28 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS07560 658f8ba1acab42b0ac6802e6ebab1e43 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 367 442 1.4E-16 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Gene3D G3DSA:2.40.30.110 288 372 4.6E-24 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Gene3D G3DSA:3.30.1360.120 6 58 6.4E-57 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Gene3D G3DSA:3.30.1360.120 147 234 6.4E-57 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 257 8.1E-91 T 26-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 363 8.7E-21 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 PIRSF PIRSF006487 1 373 1.8E-82 T 26-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 Gene3D G3DSA:3.30.70.1400 59 141 6.4E-32 T 26-04-2016 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 PANTHER PTHR13847:SF209 1 372 3.0E-260 T 26-04-2016 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 SUPERFAMILY SSF103025 6 286 1.88E-91 T 26-04-2016 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 PANTHER PTHR13847 1 372 3.0E-260 T 26-04-2016 PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 SUPERFAMILY SSF101790 279 372 2.45E-24 T 26-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAM18_RS13340 f5d58516075d93a4570dec367fb7801f 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 367 4.0E-106 T 26-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Pfam PF11412 Disulphide bond corrector protein DsbC 38 150 5.9E-35 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 SUPERFAMILY SSF74863 35 151 3.27E-38 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 SUPERFAMILY SSF52833 474 585 8.93E-19 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Gene3D G3DSA:3.40.30.10 477 588 2.3E-28 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 180 385 1.4E-11 T 26-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Pfam PF13899 Thioredoxin-like 479 561 3.9E-19 T 26-04-2016 PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Gene3D G3DSA:2.60.40.1250 37 153 2.1E-42 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 PANTHER PTHR32234 7 590 6.3E-214 T 26-04-2016 PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 PANTHER PTHR32234:SF0 7 590 6.3E-214 T 26-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PAM18_RS25370 c8a3ff30920224f5bc938f6cdfd1b610 591 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 588 37.646 T 26-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 Pfam PF00923 Transaldolase 14 301 1.1E-96 T 26-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 TIGRFAM TIGR00874 talAB: transaldolase 4 303 8.9E-134 T 26-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 Hamap MF_00492 Transaldolase [tal]. 2 307 50.203 T 26-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 Gene3D G3DSA:3.20.20.70 2 304 4.6E-122 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 PANTHER PTHR10683:SF18 1 306 1.1E-165 T 26-04-2016 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 PANTHER PTHR10683 1 306 1.1E-165 T 26-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 SUPERFAMILY SSF51569 1 305 1.15E-109 T 26-04-2016 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 26-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS11120 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 26-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 Gene3D G3DSA:1.10.760.10 19 96 2.6E-29 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 94 8.1E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PANTHER PTHR40942 1 97 5.4E-69 T 26-04-2016 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 SUPERFAMILY SSF46626 20 95 1.0E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PANTHER PTHR40942:SF2 1 97 5.4E-69 T 26-04-2016 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 84 95 1.5E-8 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 30 41 1.5E-8 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 69 81 1.5E-8 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS28685 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 41 51 1.5E-8 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS07085 c6038ae8eff90cfc980fcec93f76d070 256 PANTHER PTHR30222 8 244 1.1E-128 T 26-04-2016 PAM18_RS07085 c6038ae8eff90cfc980fcec93f76d070 256 SUPERFAMILY SSF161098 3 249 1.12E-55 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07085 c6038ae8eff90cfc980fcec93f76d070 256 PANTHER PTHR30222:SF6 8 244 1.1E-128 T 26-04-2016 PAM18_RS07085 c6038ae8eff90cfc980fcec93f76d070 256 Gene3D G3DSA:1.10.3720.10 6 249 2.1E-58 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07085 c6038ae8eff90cfc980fcec93f76d070 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 245 7.1E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS25735 f14c00a4cc913a0e3cc93757ca585ccb 219 Pfam PF00857 Isochorismatase family 11 202 2.7E-21 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS25735 f14c00a4cc913a0e3cc93757ca585ccb 219 SUPERFAMILY SSF52499 3 201 3.66E-30 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS25735 f14c00a4cc913a0e3cc93757ca585ccb 219 PANTHER PTHR11080:SF2 12 202 1.7E-30 T 26-04-2016 PAM18_RS25735 f14c00a4cc913a0e3cc93757ca585ccb 219 PANTHER PTHR11080 12 202 1.7E-30 T 26-04-2016 PAM18_RS25735 f14c00a4cc913a0e3cc93757ca585ccb 219 Gene3D G3DSA:3.40.50.850 9 202 2.4E-38 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PANTHER PTHR33164 7 138 5.6E-80 T 26-04-2016 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PANTHER PTHR33164:SF13 7 138 5.6E-80 T 26-04-2016 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.6E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.6E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.6E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SMART SM00347 25 125 7.7E-24 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Gene3D G3DSA:1.10.10.10 4 137 7.7E-37 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 7 136 1.5E-61 T 26-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Pfam PF01047 MarR family 32 90 1.5E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS04095 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SUPERFAMILY SSF46785 7 137 8.85E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 SMART SM01236 187 289 2.7E-20 T 26-04-2016 PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 Pfam PF14518 Iron-containing redox enzyme 154 321 4.1E-14 T 26-04-2016 IPR028201 PqqC-like protein PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 19 106 1.3E-44 T 26-04-2016 IPR029474 Haem-oxygenase-associated, N-terminal helices PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 Gene3D G3DSA:1.20.910.10 118 341 2.1E-58 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 SUPERFAMILY SSF48613 120 334 7.79E-31 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS07550 9ff84ec3ad2c8927f560c0fc9ad10e43 345 Gene3D G3DSA:1.10.1240.20 19 106 1.8E-44 T 26-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PAM18_RS10120 dc07b0402faa1def170e228cce856999 240 PANTHER PTHR23344:SF20 3 240 4.2E-73 T 26-04-2016 PAM18_RS10120 dc07b0402faa1def170e228cce856999 240 PANTHER PTHR23344 3 240 4.2E-73 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS10120 dc07b0402faa1def170e228cce856999 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 5.5E-34 T 26-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PAM18_RS10120 dc07b0402faa1def170e228cce856999 240 Gene3D G3DSA:3.20.20.190 2 238 2.2E-61 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS10120 dc07b0402faa1def170e228cce856999 240 SUPERFAMILY SSF51695 2 237 1.65E-61 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.701 T 26-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 PANTHER PTHR34128:SF1 2 162 7.1E-75 T 26-04-2016 PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 PANTHER PTHR34128 2 162 7.1E-75 T 26-04-2016 PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 Gene3D G3DSA:2.40.50.140 27 125 3.4E-38 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 Pfam PF03100 CcmE 5 131 2.2E-47 T 26-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PAM18_RS18695 a75ef3a827d428437bce0dd2b0e352c1 162 SUPERFAMILY SSF82093 30 137 2.22E-40 T 26-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SUPERFAMILY SSF51126 164 465 4.19E-38 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00722 262 422 9.3E-20 T 26-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 395 437 8.0E-7 T 26-04-2016 IPR022441 Parallel beta-helix repeat-2 PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 Pfam PF05048 Periplasmic copper-binding protein (NosD) 288 438 5.9E-16 T 26-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 283 304 2200.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 329 352 15.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 401 423 7.2 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 243 270 220.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 305 327 81.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 354 376 2200.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 SMART SM00710 378 400 110.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 Gene3D G3DSA:2.160.20.10 235 257 3.2E-16 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 Gene3D G3DSA:2.160.20.10 298 448 3.2E-16 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS07420 1ef521c30108ab31a947c2d1bd62ee94 543 PANTHER PTHR22990 288 495 1.2E-26 T 26-04-2016 PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 Gene3D G3DSA:1.20.120.530 69 213 1.3E-18 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 Gene3D G3DSA:1.10.10.10 6 66 4.9E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 SUPERFAMILY SSF46785 6 94 5.16E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 SMART SM00895 75 212 3.0E-22 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 PANTHER PTHR11751:SF355 1 91 3.6E-34 T 26-04-2016 PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 Pfam PF07729 FCD domain 77 211 9.3E-18 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 SUPERFAMILY SSF48008 71 214 1.7E-17 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 PANTHER PTHR11751 1 91 3.6E-34 T 26-04-2016 PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 63 6.1E-12 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS25675 512adfe37de5c913e876c2b51b63b3c9 237 SMART SM00345 8 65 3.3E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 SUPERFAMILY SSF53901 4 252 5.32E-78 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 SMART SM00825 Beta-ketoacyl synthase 6 414 3.2E-16 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.0E-60 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.5E-198 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.8E-41 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 Gene3D G3DSA:3.40.47.10 263 412 2.5E-66 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 Gene3D G3DSA:3.40.47.10 3 260 1.7E-76 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 SUPERFAMILY SSF53901 215 412 1.5E-75 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 PIRSF PIRSF000447 1 414 5.4E-192 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PAM18_RS10250 4883180ec932cd69996ef994017c587d 414 PANTHER PTHR11712 3 412 4.5E-220 T 26-04-2016 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81648 281 396 5.01E-33 T 26-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 PANTHER PTHR19271 1 401 2.2E-275 T 26-04-2016 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 PIRSF PIRSF038885 1 403 5.5E-161 T 26-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 379 1.0E-43 T 26-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 PANTHER PTHR19271:SF9 1 401 2.2E-275 T 26-04-2016 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 Gene3D G3DSA:1.20.810.10 5 399 6.3E-163 T 26-04-2016 IPR027387 Cytochrome b/b6-like domain PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00033 Cytochrome b/b6/petB 24 211 8.5E-68 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS23100 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81342 13 279 1.27E-96 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 Gene3D G3DSA:3.40.50.720 4 256 4.6E-80 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 3.5E-54 T 26-04-2016 PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.7E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 SUPERFAMILY SSF51735 4 256 1.13E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PANTHER PTHR24322 162 196 1.4E-50 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PANTHER PTHR24322 14 145 1.4E-50 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.7E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.7E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PANTHER PTHR24322:SF513 162 196 1.4E-50 T 26-04-2016 PAM18_RS08115 1afe3620d7da5a364b7223ae56ca9e16 256 PANTHER PTHR24322:SF513 14 145 1.4E-50 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82693 558 649 4.97E-12 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82866 294 493 6.41E-48 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82866 794 1019 5.89E-44 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82714 183 268 1.44E-15 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PANTHER PTHR32063:SF34 1 1035 0.0 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PANTHER PTHR32063 1 1035 0.0 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82693 40 134 2.96E-22 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82714 708 791 3.53E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:3.30.2090.10 708 790 3.2E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:3.30.2090.10 183 267 1.1E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.3E-88 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:3.30.70.1430 572 647 3.2E-8 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:1.20.1640.10 287 499 7.6E-58 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82693 135 182 5.23E-19 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 SUPERFAMILY SSF82693 270 326 5.23E-19 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:3.30.70.1430 40 142 2.5E-28 T 26-04-2016 PAM18_RS12950 df018a09a563508a4e5ea036b4c29aa9 1036 Gene3D G3DSA:1.10.3850.10 799 1015 2.5E-55 T 26-04-2016 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 Gene3D G3DSA:3.40.190.10 1 111 4.8E-33 T 26-04-2016 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 6.0E-53 T 26-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 Pfam PF01634 ATP phosphoribosyltransferase 51 202 1.0E-45 T 26-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 56.677 T 26-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 26-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 PANTHER PTHR21403:SF3 1 210 8.8E-98 T 26-04-2016 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 SUPERFAMILY SSF53850 1 206 3.26E-63 T 26-04-2016 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 Gene3D G3DSA:3.40.190.10 112 173 4.2E-28 T 26-04-2016 PAM18_RS23195 2f6af095806ce47f2cdf246f116c50a8 211 PANTHER PTHR21403 1 210 8.8E-98 T 26-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 153 270 1.2E-41 T 26-04-2016 IPR014162 Tol-Pal system, YbgF PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 Pfam PF16331 TolA binding protein trimerisation 61 116 5.5E-12 T 26-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 SUPERFAMILY SSF48452 150 265 3.8E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 PANTHER PTHR26312:SF74 41 57 8.4E-69 T 26-04-2016 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 PANTHER PTHR26312:SF74 164 274 8.4E-69 T 26-04-2016 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 Pfam PF13525 Outer membrane lipoprotein 153 274 4.4E-10 T 26-04-2016 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 PANTHER PTHR26312 41 57 8.4E-69 T 26-04-2016 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 PANTHER PTHR26312 164 274 8.4E-69 T 26-04-2016 PAM18_RS20745 af6ee7b70925952f340c508ad234af5b 274 Gene3D G3DSA:1.25.40.10 155 264 7.4E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 183 7.3E-17 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 Gene3D G3DSA:3.40.50.1000 87 220 1.1E-41 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 Gene3D G3DSA:3.40.50.1000 3 20 1.1E-41 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PANTHER PTHR18901 1 221 1.2E-61 T 26-04-2016 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 5.6E-23 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.8E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.8E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.8E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.8E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 SUPERFAMILY SSF56784 4 219 1.5E-51 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 PANTHER PTHR18901:SF9 1 221 1.2E-61 T 26-04-2016 PAM18_RS02840 8423b5973e020b16d4832334ce226bb2 231 Gene3D G3DSA:1.10.150.240 48 81 0.001 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PIRSF PIRSF004862 27 598 8.1E-140 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 172 186 2.2E-41 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 215 233 2.2E-41 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 285 303 2.2E-41 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 392 416 2.2E-41 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 140 158 2.2E-41 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 Pfam PF08345 Flagellar M-ring protein C-terminal 272 469 6.6E-49 T 26-04-2016 IPR013556 Flagellar M-ring C-terminal PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 34 513 3.2E-93 T 26-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 8.3E-71 T 26-04-2016 IPR006182 Secretory protein YscJ/FliF PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PANTHER PTHR30046:SF0 375 598 5.6E-212 T 26-04-2016 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PANTHER PTHR30046:SF0 18 342 5.6E-212 T 26-04-2016 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PANTHER PTHR30046 375 598 5.6E-212 T 26-04-2016 PAM18_RS20085 326ed212556609999d03b468de9dcfa6 598 PANTHER PTHR30046 18 342 5.6E-212 T 26-04-2016 PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 PANTHER PTHR10992 13 159 2.0E-18 T 26-04-2016 PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 PANTHER PTHR10992 206 290 2.0E-18 T 26-04-2016 PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 PANTHER PTHR10992:SF107 13 159 2.0E-18 T 26-04-2016 PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 PANTHER PTHR10992:SF107 206 290 2.0E-18 T 26-04-2016 PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 SUPERFAMILY SSF53474 12 288 2.97E-36 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 Gene3D G3DSA:3.40.50.1820 13 288 1.6E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28795 b5f2bfa6554c34dbfa81f1da58da547d 292 Pfam PF12697 Alpha/beta hydrolase family 31 282 2.8E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 349 3.3E-82 T 26-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Gene3D G3DSA:3.30.9.10 112 122 9.7E-18 T 26-04-2016 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Gene3D G3DSA:3.30.9.10 209 304 9.7E-18 T 26-04-2016 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Gene3D G3DSA:3.50.50.60 306 360 1.9E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Gene3D G3DSA:3.50.50.60 136 208 1.9E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Gene3D G3DSA:3.50.50.60 4 82 1.9E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 SUPERFAMILY SSF54373 219 306 7.46E-21 T 26-04-2016 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 PANTHER PTHR13847 4 360 6.7E-118 T 26-04-2016 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 Pfam PF01266 FAD dependent oxidoreductase 4 345 9.1E-66 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 SUPERFAMILY SSF51905 4 219 1.36E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 SUPERFAMILY SSF51905 306 360 1.36E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23720 8339efbb73f7fa1b1cae0e7219ff312b 364 PANTHER PTHR13847:SF180 4 360 6.7E-118 T 26-04-2016 PAM18_RS18450 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 PANTHER PTHR37421:SF1 2 147 3.8E-69 T 26-04-2016 PAM18_RS18450 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Pfam PF03692 Putative zinc- or iron-chelating domain 26 93 1.5E-9 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PAM18_RS18450 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 PANTHER PTHR37421 2 147 3.8E-69 T 26-04-2016 PAM18_RS18450 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 4 149 42.239 T 26-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 PAM18_RS18450 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 PIRSF PIRSF006173 1 149 1.0E-66 T 26-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 PAM18_RS20915 286b648b97a35017043d5b223b11da91 77 SUPERFAMILY SSF52833 2 76 1.36E-9 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20915 286b648b97a35017043d5b223b11da91 77 Pfam PF13192 Thioredoxin domain 4 66 1.7E-7 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20915 286b648b97a35017043d5b223b11da91 77 Gene3D G3DSA:3.40.30.10 7 67 1.2E-11 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 Gene3D G3DSA:3.40.50.2000 285 481 3.3E-62 T 26-04-2016 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 34 500 5.2E-160 T 26-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 PANTHER PTHR12526:SF295 34 502 5.9E-246 T 26-04-2016 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 SUPERFAMILY SSF53756 34 503 1.74E-105 T 26-04-2016 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 Pfam PF00534 Glycosyl transferases group 1 320 463 6.1E-15 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 Pfam PF08323 Starch synthase catalytic domain 34 268 2.1E-65 T 26-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 Hamap MF_00484 Glycogen synthase [glgA]. 33 500 41.039 T 26-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14755 69b003e1dacdd537d9a19b8ef32bbca2 513 PANTHER PTHR12526 34 502 5.9E-246 T 26-04-2016 PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 3.7E-5 T 26-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF00005 ABC transporter 20 166 3.5E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 SUPERFAMILY SSF52540 4 235 1.93E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 3.5E-122 T 26-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 Gene3D G3DSA:3.40.50.300 3 233 1.2E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 SMART SM00382 28 213 6.3E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 PANTHER PTHR24220:SF497 5 238 3.2E-146 T 26-04-2016 PAM18_RS23255 29be98c92fe47efa1a9a02e79eb01bb8 241 PANTHER PTHR24220 5 238 3.2E-146 T 26-04-2016 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 5.9E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 5.9E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 5.9E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 5.9E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 SUPERFAMILY SSF56784 1 229 7.78E-47 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 Gene3D G3DSA:3.40.50.1000 1 222 2.8E-36 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PANTHER PTHR12725 1 229 3.8E-82 T 26-04-2016 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 81 187 1.5E-18 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 194 8.1E-12 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 PANTHER PTHR12725:SF66 1 229 3.8E-82 T 26-04-2016 PAM18_RS21585 7837771a40f28801f962bdad2f6acb16 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 1 200 2.1E-66 T 26-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 93 174 1.8E-13 T 26-04-2016 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 PANTHER PTHR30346 1 294 3.7E-117 T 26-04-2016 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF53850 88 294 1.02E-37 T 26-04-2016 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:1.10.10.10 1 83 3.1E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 PANTHER PTHR30346:SF15 1 294 3.7E-117 T 26-04-2016 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF46785 1 85 6.2E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 175 271 1.0E-29 T 26-04-2016 PAM18_RS27915 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF03466 LysR substrate binding domain 88 294 5.9E-44 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS26180 f0c439adafe9d20da7fd11c64a02aa96 298 Gene3D G3DSA:3.40.630.30 136 281 4.5E-6 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS26180 f0c439adafe9d20da7fd11c64a02aa96 298 Pfam PF07395 Mig-14 35 298 2.5E-143 T 26-04-2016 IPR009977 Mig-14 PAM18_RS26180 f0c439adafe9d20da7fd11c64a02aa96 298 SUPERFAMILY SSF55729 138 290 1.32E-17 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS26180 f0c439adafe9d20da7fd11c64a02aa96 298 PIRSF PIRSF029703 1 298 1.2E-134 T 26-04-2016 IPR009977 Mig-14 PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PANTHER PTHR24322:SF631 151 183 4.0E-39 T 26-04-2016 PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PANTHER PTHR24322:SF631 6 131 4.0E-39 T 26-04-2016 PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 SUPERFAMILY SSF51735 1 229 8.74E-57 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 Gene3D G3DSA:3.40.50.720 1 229 6.2E-48 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 Pfam PF00106 short chain dehydrogenase 3 190 3.1E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PANTHER PTHR24322 151 183 4.0E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PANTHER PTHR24322 6 131 4.0E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04385 0a1af7d73a635bd8ce724626b16507d8 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 SUPERFAMILY SSF55620 2 115 1.72E-35 T 26-04-2016 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 Gene3D G3DSA:3.30.1130.10 2 114 5.4E-39 T 26-04-2016 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 PANTHER PTHR20941 2 117 2.7E-30 T 26-04-2016 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 SMART SM00905 4 114 1.2E-50 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 115 9.3E-32 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 5.9E-25 T 26-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02950 82d630343f0451bffb467118d42bb260 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.6E-32 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:1.20.120.430 385 455 4.0E-58 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:1.20.120.430 248 271 4.0E-58 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:1.20.120.430 122 182 4.0E-58 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF01926 50S ribosome-binding GTPase 219 308 7.2E-24 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:3.40.50.300 286 377 6.0E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 2.4E-36 T 26-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 5.2E-5 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 5.2E-5 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 PANTHER PTHR11649 9 455 6.4E-169 T 26-04-2016 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:3.30.1360.120 3 121 7.9E-43 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF12631 MnmE helical domain 123 452 7.0E-58 T 26-04-2016 IPR025867 MnmE, helical domain PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 455 32.781 T 26-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 367 5.1E-20 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF116878 121 220 8.63E-50 T 26-04-2016 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF116878 380 455 8.63E-50 T 26-04-2016 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 455 5.5E-103 T 26-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:3.40.50.300 211 247 4.5E-8 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF52540 73 152 8.76E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF52540 188 373 8.76E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29105 be0dc511ea5dadb6f4f1b260c9a868f5 455 PANTHER PTHR11649:SF56 9 455 6.4E-169 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF52317 1039 1297 3.96E-96 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1297 2.9E-106 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF55326 219 426 2.23E-63 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SMART SM01211 1042 1297 5.9E-155 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF55326 622 814 2.62E-67 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF56042 430 612 8.67E-54 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Gene3D G3DSA:3.30.1330.10 644 808 2.8E-15 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Gene3D G3DSA:3.30.1330.10 209 420 1.2E-38 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 26-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 PANTHER PTHR10099 1 1298 0.0 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.37 T 26-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF82697 1 150 1.99E-47 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Gene3D G3DSA:3.40.50.880 1043 1266 4.1E-11 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 2.2E-15 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 586 5.8E-31 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF56042 823 1036 5.08E-56 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 SUPERFAMILY SSF109736 153 218 1.96E-21 T 26-04-2016 PAM18_RS05990 d171d95f97704d466a41af1fc278a093 1298 PANTHER PTHR10099:SF5 1 1298 0.0 T 26-04-2016 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 Gene3D G3DSA:1.20.120.220 100 287 5.1E-50 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.57 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 PANTHER PTHR11410:SF7 27 125 1.9E-92 T 26-04-2016 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 PANTHER PTHR11410:SF7 143 289 1.9E-92 T 26-04-2016 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 Pfam PF00119 ATP synthase A chain 51 282 4.8E-55 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 PANTHER PTHR11410 27 125 1.9E-92 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 PANTHER PTHR11410 143 289 1.9E-92 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 283 4.4E-41 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 217 226 - T 26-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site PAM18_RS29070 340ddc6022528465f23c151efcf27e2c 289 SUPERFAMILY SSF81336 99 282 3.14E-39 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Gene3D G3DSA:1.10.540.10 9 96 1.8E-17 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Gene3D G3DSA:1.20.140.10 219 381 2.1E-32 T 26-04-2016 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 PANTHER PTHR10909:SF152 12 363 2.8E-107 T 26-04-2016 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 216 4.2E-9 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 PANTHER PTHR10909 12 363 2.8E-107 T 26-04-2016 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Gene3D G3DSA:2.40.110.10 133 218 1.7E-28 T 26-04-2016 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 SUPERFAMILY SSF56645 18 225 7.46E-42 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 PIRSF PIRSF016578 2 383 5.1E-31 T 26-04-2016 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 SUPERFAMILY SSF47203 246 381 1.93E-20 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 86 2.3E-4 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12215 cb1c89abfda7f5d156f8d92a05e51477 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 256 366 1.5E-9 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 Gene3D G3DSA:2.160.20.70 143 263 1.3E-36 T 26-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 263 27.552 T 26-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 SUPERFAMILY SSF63848 157 262 1.96E-28 T 26-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 PANTHER PTHR34108 3 263 8.9E-79 T 26-04-2016 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 7 112 7.5E-30 T 26-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 263 1.7E-94 T 26-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 PANTHER PTHR34108:SF1 3 263 8.9E-79 T 26-04-2016 PAM18_RS08865 56fdd0a9bfda07bfa2d8a5cad43f120e 263 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 159 260 4.7E-29 T 26-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PANTHER PTHR30222 8 365 2.8E-226 T 26-04-2016 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 Gene3D G3DSA:3.40.190.10 143 313 1.6E-76 T 26-04-2016 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 Pfam PF13416 Bacterial extracellular solute-binding protein 43 326 6.0E-35 T 26-04-2016 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PANTHER PTHR30222:SF11 8 365 2.8E-226 T 26-04-2016 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 SUPERFAMILY SSF53850 27 364 1.56E-102 T 26-04-2016 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PIRSF PIRSF019574 1 365 2.1E-142 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.0E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01505 212963d91248f1373339b49d8c6667ec 365 Gene3D G3DSA:3.40.190.10 46 142 1.1E-14 T 26-04-2016 PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 Gene3D G3DSA:3.40.50.620 12 245 1.0E-30 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 Pfam PF11922 Domain of unknown function (DUF3440) 247 348 6.9E-26 T 26-04-2016 IPR021845 Protein of unknown function DUF3440 PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 245 1.1E-14 T 26-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 SUPERFAMILY SSF52402 5 243 3.97E-39 T 26-04-2016 PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 PANTHER PTHR30083:SF0 1 407 7.8E-215 T 26-04-2016 PAM18_RS14955 a663dfb997b496f36d47ef3d01fe1e09 408 PANTHER PTHR30083 1 407 7.8E-215 T 26-04-2016 PAM18_RS23220 ec027a4df7f456370ca9619c58b076f9 157 Pfam PF02470 MlaD protein 38 116 2.0E-20 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS23220 ec027a4df7f456370ca9619c58b076f9 157 PANTHER PTHR33371 1 146 2.1E-42 T 26-04-2016 PAM18_RS23220 ec027a4df7f456370ca9619c58b076f9 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 8.6E-54 T 26-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF53686 11 355 4.98E-109 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 PANTHER PTHR10314 1 358 3.5E-205 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF55021 410 503 3.89E-26 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 Gene3D G3DSA:3.40.1020.10 331 503 1.5E-53 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 Gene3D G3DSA:3.40.50.1100 69 324 3.6E-88 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 503 7.7E-246 T 26-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 SUPERFAMILY SSF55021 327 413 2.01E-28 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 3.0E-84 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 PANTHER PTHR10314:SF30 1 358 3.5E-205 T 26-04-2016 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 415 503 1.6E-21 T 26-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS01665 522aebce9fb53c0de3e05eb6a5042648 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 2.3E-25 T 26-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 SUPERFAMILY SSF51735 236 289 6.84E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 SUPERFAMILY SSF51735 8 204 6.84E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 Pfam PF00106 short chain dehydrogenase 14 204 4.4E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.1E-16 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.1E-16 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.1E-16 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.1E-16 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.1E-16 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 Gene3D G3DSA:3.40.50.720 12 271 3.1E-66 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PANTHER PTHR24322 17 145 6.3E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08400 f99206236d45e6b3459108c3d1d56208 304 PANTHER PTHR24322 161 195 6.3E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 PANTHER PTHR24220 7 243 5.1E-104 T 26-04-2016 PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 SMART SM00382 30 199 2.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 SUPERFAMILY SSF52540 4 214 2.5E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 Gene3D G3DSA:3.40.50.300 2 212 8.4E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 PANTHER PTHR24220:SF466 7 243 5.1E-104 T 26-04-2016 PAM18_RS28730 3a65a7d41efec3c07f35217234d4d174 269 Pfam PF00005 ABC transporter 21 149 1.1E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 26-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 27 215 6.4E-45 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 215 1.2E-9 T 26-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 PANTHER PTHR10851 1 215 2.2E-75 T 26-04-2016 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 PIRSF PIRSF000190 2 215 8.0E-61 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 123 1.2E-17 T 26-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 SUPERFAMILY SSF50475 14 215 2.16E-52 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS03690 04509d31cd54b1a1b06d3f604f13d301 215 Gene3D G3DSA:2.30.110.10 22 215 1.7E-58 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 Pfam PF12146 Serine aminopeptidase, S33 27 288 2.9E-68 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 PANTHER PTHR11614:SF87 7 302 6.8E-59 T 26-04-2016 PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 Gene3D G3DSA:3.40.50.1820 183 305 1.1E-52 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 Gene3D G3DSA:3.40.50.1820 7 146 1.1E-52 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 PANTHER PTHR11614 7 302 6.8E-59 T 26-04-2016 PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 PIRSF PIRSF037442 1 309 4.2E-42 T 26-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PAM18_RS08555 befa2ef493778bec061046c4062758f5 316 SUPERFAMILY SSF53474 6 305 1.88E-43 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 32.757 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.0E-27 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.0E-27 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.0E-27 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.0E-27 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 26-04-2016 IPR033135 ClpP, histidine active site PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 Pfam PF00574 Clp protease 19 192 4.2E-64 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 Gene3D G3DSA:3.90.226.10 21 195 4.5E-61 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PANTHER PTHR10381 26 199 4.1E-71 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 SUPERFAMILY SSF52096 16 194 1.67E-54 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS08420 54a0ae541ff817f80c4e3037317c3122 201 PANTHER PTHR10381:SF22 26 199 4.1E-71 T 26-04-2016 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Gene3D G3DSA:3.20.10.10 123 262 9.3E-42 T 26-04-2016 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 PANTHER PTHR11825 2 270 2.2E-94 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Gene3D G3DSA:3.30.470.10 4 105 1.9E-29 T 26-04-2016 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 PANTHER PTHR11825:SF55 2 270 2.2E-94 T 26-04-2016 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 SUPERFAMILY SSF56752 4 263 5.62E-74 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Pfam PF01063 Amino-transferase class IV 25 246 1.8E-48 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 PAM18_RS10255 89c0ae1e9939ded0de3b8ae0b87e9d07 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 263 8.4E-89 T 26-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 SUPERFAMILY SSF50249 1 65 2.4E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 SMART SM00357 3 67 3.9E-23 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PANTHER PTHR11544:SF52 1 89 2.3E-55 T 26-04-2016 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PANTHER PTHR11544 1 89 2.3E-55 T 26-04-2016 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.5E-27 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 PIRSF PIRSF002599 1 84 2.2E-22 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 Gene3D G3DSA:2.40.50.140 1 65 4.3E-27 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12085 369e4e9b07834af497b8a61b3a4a6c1a 90 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 6.5E-38 T 26-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 SUPERFAMILY SSF46785 1 110 6.98E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 PANTHER PTHR30126:SF33 1 287 3.9E-185 T 26-04-2016 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:1.10.10.10 1 86 1.3E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 PANTHER PTHR30126 1 287 3.9E-185 T 26-04-2016 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:3.40.190.10 181 257 2.6E-21 T 26-04-2016 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:3.40.190.10 88 180 2.2E-19 T 26-04-2016 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 Pfam PF03466 LysR substrate binding domain 87 288 1.4E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 SUPERFAMILY SSF53850 86 289 3.86E-44 T 26-04-2016 PAM18_RS09455 84d599b7b8d2ef94e44a277360c99edd 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-23 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 165 244 6.5E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 PANTHER PTHR35008:SF4 7 286 3.2E-126 T 26-04-2016 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 Gene3D G3DSA:1.10.760.10 35 146 8.2E-31 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 SUPERFAMILY SSF46626 37 144 1.74E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 SUPERFAMILY SSF46626 155 274 3.95E-22 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 Gene3D G3DSA:1.10.760.10 158 249 2.3E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13175 6a0956e319564723abb1dcbad9ff0d02 289 PANTHER PTHR35008 7 286 3.2E-126 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Gene3D G3DSA:3.40.190.10 174 269 1.9E-26 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.9E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 PANTHER PTHR30118:SF4 1 300 3.1E-143 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Gene3D G3DSA:1.10.10.10 3 86 1.1E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.9E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.9E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.9E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 SUPERFAMILY SSF53850 96 297 4.34E-43 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 PANTHER PTHR30118 1 300 3.1E-143 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Pfam PF03466 LysR substrate binding domain 97 296 5.6E-30 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Gene3D G3DSA:3.40.190.10 92 173 2.6E-28 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 Gene3D G3DSA:3.40.190.10 274 298 2.6E-28 T 26-04-2016 PAM18_RS14990 ce20a7cdd4063040140a7c6b8ca96fbb 301 SUPERFAMILY SSF46785 5 85 1.81E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 SUPERFAMILY SSF63411 255 418 2.93E-17 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 Pfam PF05193 Peptidase M16 inactive domain 193 359 2.4E-16 T 26-04-2016 IPR007863 Peptidase M16, C-terminal PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 SUPERFAMILY SSF63411 24 229 1.51E-27 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 PANTHER PTHR11851:SF124 20 430 5.4E-56 T 26-04-2016 PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 Gene3D G3DSA:3.30.830.10 21 242 2.7E-33 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 Gene3D G3DSA:3.30.830.10 284 417 5.3E-8 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 Pfam PF00675 Insulinase (Peptidase family M16) 36 149 3.7E-14 T 26-04-2016 IPR011765 Peptidase M16, N-terminal PAM18_RS28600 de815aa9580ee0f7f50384ce5dcc5ea9 457 PANTHER PTHR11851 20 430 5.4E-56 T 26-04-2016 PAM18_RS04655 d6c2e80b52cfeab806c9deb850ac26dd 273 PIRSF PIRSF018982 1 261 5.8E-107 T 26-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PAM18_RS04655 d6c2e80b52cfeab806c9deb850ac26dd 273 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 5 250 40.18 T 26-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PAM18_RS04655 d6c2e80b52cfeab806c9deb850ac26dd 273 PANTHER PTHR39330 1 267 5.7E-133 T 26-04-2016 PAM18_RS04655 d6c2e80b52cfeab806c9deb850ac26dd 273 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 13 250 1.8E-94 T 26-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 PANTHER PTHR32145:SF7 1 256 3.2E-94 T 26-04-2016 PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 Pfam PF00753 Metallo-beta-lactamase superfamily 27 225 2.2E-23 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 SUPERFAMILY SSF56281 12 243 8.65E-32 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 PANTHER PTHR32145 1 256 3.2E-94 T 26-04-2016 PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 SMART SM00849 29 225 3.7E-22 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS22680 4d4854571d6a00e9b009fa274398efd5 261 Gene3D G3DSA:3.60.15.10 6 246 8.7E-50 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 Pfam PF01047 MarR family 40 97 1.7E-16 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 Gene3D G3DSA:1.10.10.10 12 145 1.5E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 SUPERFAMILY SSF46785 6 146 2.42E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 SMART SM00347 32 133 8.1E-18 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 PANTHER PTHR33164 12 157 6.8E-22 T 26-04-2016 PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS07750 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.6E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Gene3D G3DSA:1.10.287.130 409 461 4.6E-4 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Pfam PF02743 Cache domain 52 239 6.3E-20 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 5.9E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 5.9E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.9E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 5.9E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 SUPERFAMILY SSF47384 396 473 7.85E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 SMART SM00387 514 624 1.6E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PANTHER PTHR24423 384 633 2.6E-162 T 26-04-2016 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PANTHER PTHR24423 81 138 2.6E-162 T 26-04-2016 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PIRSF PIRSF036431 9 631 4.0E-206 T 26-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Gene3D G3DSA:3.30.565.10 462 625 5.5E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 409 472 4.6E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PANTHER PTHR24423:SF451 384 633 2.6E-162 T 26-04-2016 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 PANTHER PTHR24423:SF451 81 138 2.6E-162 T 26-04-2016 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 SMART SM00388 407 475 1.7E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 622 9.3E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 SUPERFAMILY SSF55874 478 624 3.67E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 SUPERFAMILY SSF103190 80 204 1.67E-13 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS18265 be8a3d8d61d17beec622f1afc7b7bf1e 633 Gene3D G3DSA:3.30.450.20 101 194 8.0E-6 T 26-04-2016 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 SUPERFAMILY SSF52151 3 122 2.79E-50 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 SUPERFAMILY SSF52151 192 283 2.79E-50 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 SUPERFAMILY SSF55048 122 191 7.32E-11 T 26-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 PIRSF PIRSF000446 1 301 1.9E-54 T 26-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 Pfam PF00698 Acyl transferase domain 5 272 3.7E-28 T 26-04-2016 IPR014043 Acyl transferase PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 PANTHER PTHR10982 5 280 1.3E-81 T 26-04-2016 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 Gene3D G3DSA:3.30.70.250 124 190 1.6E-15 T 26-04-2016 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 8.4E-21 T 26-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 303 1.4E-112 T 26-04-2016 IPR017554 Malonate decarboxylase, McdH subunit PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 Gene3D G3DSA:3.40.366.10 2 116 3.8E-47 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS01055 b1f7ff712bb7213b247fb94a4ffa981f 310 Gene3D G3DSA:3.40.366.10 191 284 3.8E-47 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Gene3D G3DSA:3.10.50.30 86 165 5.6E-29 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 28.719 T 26-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 52.946 T 26-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 165 5.3E-85 T 26-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 164 5.6E-24 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 SUPERFAMILY SSF54534 89 164 1.57E-22 T 26-04-2016 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 PIRSF PIRSF006092 9 166 7.9E-48 T 26-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 SUPERFAMILY SSF46557 13 85 1.26E-24 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 PANTHER PTHR30437 1 166 4.7E-94 T 26-04-2016 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 9.8E-25 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 26-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 PANTHER PTHR30437:SF6 1 166 4.7E-94 T 26-04-2016 PAM18_RS10790 adb0da690e71f44b5e2c17a0c4500663 168 Gene3D G3DSA:1.10.287.180 14 84 1.8E-24 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 PANTHER PTHR11695:SF557 26 344 6.7E-205 T 26-04-2016 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 Gene3D G3DSA:3.40.50.720 143 309 4.2E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 Gene3D G3DSA:3.90.180.10 3 142 1.8E-57 T 26-04-2016 IPR011032 GroES-like PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 PANTHER PTHR11695 26 344 6.7E-205 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 3.4E-43 T 26-04-2016 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 Pfam PF00107 Zinc-binding dehydrogenase 161 300 5.6E-18 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 SUPERFAMILY SSF50129 7 147 9.6E-48 T 26-04-2016 IPR011032 GroES-like PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 SMART SM00829 22 339 2.0E-5 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS14575 eb401b3b0081725a06170b82179cba6e 345 SUPERFAMILY SSF51735 127 305 1.63E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 823 935 3.5E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.50.2300 955 1075 4.5E-37 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF47226 1100 1182 5.23E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF47226 1057 1070 5.23E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF00072 Response regulator receiver domain 960 1074 3.0E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00448 958 1074 2.9E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF01627 Hpt domain 1121 1178 9.3E-9 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:1.20.120.160 1099 1182 4.0E-15 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF08448 PAS fold 583 690 8.1E-13 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.30.565.10 776 936 4.6E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 300 516 8.8E-31 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 273 9.7E-25 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.190.10 296 384 1.1E-17 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.190.10 54 142 1.0E-14 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.190.10 235 274 1.0E-14 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.190.10 480 516 1.1E-17 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF47384 692 776 1.43E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.30.450.20 564 688 3.1E-16 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF53850 292 519 9.45E-39 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00388 709 775 8.3E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF55874 765 935 6.68E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 915 1.7E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 881 891 1.7E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 877 1.7E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 934 1.7E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00091 574 642 0.001 T 26-04-2016 IPR000014 PAS domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF52172 956 1076 1.57E-33 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Pfam PF00512 His Kinase A (phospho-acceptor) domain 709 775 1.8E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00387 822 937 1.1E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:1.10.287.130 704 771 2.5E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF55785 561 687 9.77E-18 T 26-04-2016 IPR000014 PAS domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 577 692 1.7E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 Gene3D G3DSA:3.40.190.10 386 461 3.3E-8 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00062 298 520 8.0E-26 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SMART SM00062 56 275 2.1E-16 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PANTHER PTHR24423 2 13 3.6E-184 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PANTHER PTHR24423 552 1116 3.6E-184 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 SUPERFAMILY SSF53850 48 274 4.08E-31 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PANTHER PTHR24423:SF382 2 13 3.6E-184 T 26-04-2016 PAM18_RS05050 caa1da3d13ef1667831e97984d9976d8 1212 PANTHER PTHR24423:SF382 552 1116 3.6E-184 T 26-04-2016 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PANTHER PTHR10458:SF4 1 167 2.9E-93 T 26-04-2016 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PIRSF PIRSF004749 1 172 3.8E-47 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 Gene3D G3DSA:3.90.45.10 1 167 6.0E-54 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 Hamap MF_00163 Peptide deformylase [def]. 1 172 27.724 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 Pfam PF01327 Polypeptide deformylase 3 159 3.5E-47 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 8.1E-35 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PRINTS PR01576 Peptide deformylase signature 111 129 1.5E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PRINTS PR01576 Peptide deformylase signature 35 64 1.5E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PRINTS PR01576 Peptide deformylase signature 130 159 1.5E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PRINTS PR01576 Peptide deformylase signature 99 110 1.5E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 PANTHER PTHR10458 1 167 2.9E-93 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS19970 ba296b9bb8ae459bc205d02f8ba8905c 179 SUPERFAMILY SSF56420 1 167 3.4E-57 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 381 2.2E-7 T 26-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.5E-28 T 26-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1156 1211 2.8E-6 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376:SF32 963 1157 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 2.4E-90 T 26-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376 4 551 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376 963 1157 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 4.8E-30 T 26-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.342 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376 570 943 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SUPERFAMILY SSF64484 1133 1363 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SUPERFAMILY SSF64484 16 944 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376:SF32 1177 1262 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 26-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SMART SM00663 235 514 5.7E-185 T 26-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376:SF32 570 943 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 7.4E-77 T 26-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376 1303 1387 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376 1177 1262 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.5E-20 T 26-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.538 T 26-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376:SF32 1303 1387 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 PANTHER PTHR19376:SF32 4 551 0.0 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.40.20 417 489 3.2E-37 T 26-04-2016 PAM18_RS03395 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.40.20 349 376 3.2E-37 T 26-04-2016 PAM18_RS27530 d8f627373153637c15aee12d06a66f45 172 PANTHER PTHR34319 1 172 4.4E-88 T 26-04-2016 PAM18_RS27530 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS27530 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS27530 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 7.5E-37 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS27530 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 1 167 1.1E-35 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS18525 d8f627373153637c15aee12d06a66f45 172 PANTHER PTHR34319 1 172 4.4E-88 T 26-04-2016 PAM18_RS18525 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS18525 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS18525 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 7.5E-37 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS18525 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 1 167 1.1E-35 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS01310 d8f627373153637c15aee12d06a66f45 172 PANTHER PTHR34319 1 172 4.4E-88 T 26-04-2016 PAM18_RS01310 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS01310 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS01310 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 7.5E-37 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS01310 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 1 167 1.1E-35 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SMART SM00838 609 696 3.3E-56 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 2.6E-63 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Gene3D G3DSA:3.30.230.10 492 611 7.9E-48 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115 311 700 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115 262 290 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115 3 185 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115:SF66 311 700 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115:SF66 262 290 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PANTHER PTHR23115:SF66 3 185 0.0 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SUPERFAMILY SSF52540 6 288 1.63E-103 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Pfam PF03144 Elongation factor Tu domain 2 332 399 7.7E-17 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SUPERFAMILY SSF54211 487 607 6.57E-42 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 109.045 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Pfam PF00679 Elongation factor G C-terminus 609 694 1.9E-30 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PRINTS PR00315 GTP-binding elongation factor signature 102 113 1.6E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PRINTS PR00315 GTP-binding elongation factor signature 86 96 1.6E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PRINTS PR00315 GTP-binding elongation factor signature 138 147 1.6E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Gene3D G3DSA:2.40.30.10 313 412 3.7E-38 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Gene3D G3DSA:3.30.70.870 413 488 1.2E-39 T 26-04-2016 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Pfam PF14492 Elongation Factor G, domain II 412 486 5.1E-35 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SMART SM00889 488 607 1.2E-69 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Gene3D G3DSA:3.30.70.240 612 698 2.9E-31 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SUPERFAMILY SSF54980 612 697 1.77E-28 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SUPERFAMILY SSF50447 272 412 3.31E-35 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Pfam PF03764 Elongation factor G, domain IV 487 605 4.5E-44 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 188 5.7E-35 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 SUPERFAMILY SSF54980 412 489 5.04E-25 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS15250 047d6ef89ad010567fbdfd7442b6ea60 702 Gene3D G3DSA:3.40.50.300 7 294 4.0E-100 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 SMART SM00304 211 264 4.0E-6 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 3.3E-9 T 26-04-2016 IPR024478 4HB MCP domain PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 SUPERFAMILY SSF58104 232 541 1.14E-70 T 26-04-2016 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 SMART SM00283 279 540 3.0E-70 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 Gene3D G3DSA:1.10.287.950 294 510 3.0E-51 T 26-04-2016 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 539 5.8E-44 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PANTHER PTHR32089:SF34 178 541 2.7E-129 T 26-04-2016 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 Pfam PF00672 HAMP domain 192 258 7.0E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PANTHER PTHR32089 178 541 2.7E-129 T 26-04-2016 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 2.5E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 2.5E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.5E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS25720 4e79e4c74e9b3307064da73e96d8a2a0 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 2.5E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 PANTHER PTHR11986 1 425 0.0 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 Gene3D G3DSA:3.40.640.10 61 319 2.8E-88 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 Pfam PF00202 Aminotransferase class-III 18 421 3.4E-136 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 SUPERFAMILY SSF53383 22 425 1.32E-141 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 Gene3D G3DSA:3.90.1150.10 4 60 5.7E-42 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 Gene3D G3DSA:3.90.1150.10 320 424 5.7E-42 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 PANTHER PTHR11986:SF70 1 425 0.0 T 26-04-2016 PAM18_RS01330 c94e957c7b0ab3a21a45852f77ec534c 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 421 5.9E-164 T 26-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 Gene3D G3DSA:3.30.1120.10 453 527 2.1E-24 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 SUPERFAMILY SSF53649 3 526 3.05E-152 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342 266 320 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342 356 528 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342 2 227 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 ProSitePatterns PS00523 Sulfatases signature 1. 49 61 - T 26-04-2016 IPR024607 Sulfatase, conserved site PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342:SF198 266 320 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342:SF198 356 528 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 PANTHER PTHR10342:SF198 2 227 8.4E-185 T 26-04-2016 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 Pfam PF00884 Sulfatase 5 420 8.1E-92 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 Gene3D G3DSA:3.40.720.10 1 449 3.9E-128 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS00925 73d4921b3fae2cc9096784c3051757c7 536 ProSitePatterns PS00149 Sulfatases signature 2. 105 115 - T 26-04-2016 IPR024607 Sulfatase, conserved site PAM18_RS14015 aba7abb273a8b0ce0f0ca1847d0c12c5 417 Gene3D G3DSA:1.20.1250.20 27 183 7.6E-23 T 26-04-2016 PAM18_RS14015 aba7abb273a8b0ce0f0ca1847d0c12c5 417 SUPERFAMILY SSF103473 17 183 3.53E-28 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS14015 aba7abb273a8b0ce0f0ca1847d0c12c5 417 PANTHER PTHR23501 20 183 3.3E-59 T 26-04-2016 PAM18_RS14015 aba7abb273a8b0ce0f0ca1847d0c12c5 417 PANTHER PTHR23501:SF16 20 183 3.3E-59 T 26-04-2016 PAM18_RS14015 aba7abb273a8b0ce0f0ca1847d0c12c5 417 Pfam PF07690 Major Facilitator Superfamily 31 182 1.8E-23 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 Pfam PF00293 NUDIX domain 145 258 2.9E-22 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 SUPERFAMILY SSF55811 8 112 2.23E-23 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 PANTHER PTHR22769:SF7 101 258 4.2E-64 T 26-04-2016 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 109 140 1.5E-11 T 26-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 Hamap MF_00297 NADH pyrophosphatase [nudC]. 8 273 50.644 T 26-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 19 107 1.0E-11 T 26-04-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 SUPERFAMILY SSF55811 94 260 1.33E-45 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 PANTHER PTHR22769 101 258 4.2E-64 T 26-04-2016 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 ProSitePatterns PS00893 Nudix box signature. 175 196 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS16500 74cdbe97249da67a29a9234d57241b3b 278 Gene3D G3DSA:3.90.79.10 101 266 2.6E-47 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS11095 e07851e59b9117e8797068287b7ffef5 134 PANTHER PTHR31793 4 134 6.1E-31 T 26-04-2016 PAM18_RS11095 e07851e59b9117e8797068287b7ffef5 134 Pfam PF13279 Thioesterase-like superfamily 14 133 2.0E-14 T 26-04-2016 PAM18_RS11095 e07851e59b9117e8797068287b7ffef5 134 SUPERFAMILY SSF54637 5 133 2.64E-32 T 26-04-2016 IPR029069 HotDog domain PAM18_RS11095 e07851e59b9117e8797068287b7ffef5 134 Gene3D G3DSA:3.10.129.10 8 133 4.8E-37 T 26-04-2016 IPR029069 HotDog domain PAM18_RS22300 65aaa473489d2598c795c56b759beaab 214 SUPERFAMILY SSF52540 57 170 1.38E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22300 65aaa473489d2598c795c56b759beaab 214 PANTHER PTHR35369:SF1 14 214 2.2E-106 T 26-04-2016 PAM18_RS22300 65aaa473489d2598c795c56b759beaab 214 PANTHER PTHR35369 14 214 2.2E-106 T 26-04-2016 PAM18_RS22300 65aaa473489d2598c795c56b759beaab 214 Gene3D G3DSA:3.40.50.300 57 170 4.2E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22300 65aaa473489d2598c795c56b759beaab 214 PIRSF PIRSF037290 14 213 9.5E-76 T 26-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 SMART SM00448 9 124 1.4E-17 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 249 1.2E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 221 1.2E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 237 1.2E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 Gene3D G3DSA:1.10.10.10 196 260 1.6E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 SMART SM00421 204 261 2.4E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 Pfam PF00072 Response regulator receiver domain 11 122 4.4E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 Pfam PF00196 Bacterial regulatory proteins, luxR family 207 259 2.9E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PANTHER PTHR26402:SF603 9 142 2.1E-48 T 26-04-2016 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PANTHER PTHR26402:SF603 173 259 2.1E-48 T 26-04-2016 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 SUPERFAMILY SSF46894 199 260 7.82E-16 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PANTHER PTHR26402 9 142 2.1E-48 T 26-04-2016 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 PANTHER PTHR26402 173 259 2.1E-48 T 26-04-2016 PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 SUPERFAMILY SSF52172 9 161 2.56E-26 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS22415 6b736a9839651ee6f07521e4e51b3e81 275 Gene3D G3DSA:3.40.50.2300 4 130 2.8E-24 T 26-04-2016 PAM18_RS10070 ba7fb550cbf357e85f4f76380910b165 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS10070 ba7fb550cbf357e85f4f76380910b165 469 Pfam PF00324 Amino acid permease 19 457 4.5E-116 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS10070 ba7fb550cbf357e85f4f76380910b165 469 PANTHER PTHR11785:SF26 1 468 0.0 T 26-04-2016 PAM18_RS10070 ba7fb550cbf357e85f4f76380910b165 469 PIRSF PIRSF006060 1 468 8.3E-79 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS10070 ba7fb550cbf357e85f4f76380910b165 469 PANTHER PTHR11785 1 468 0.0 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 PANTHER PTHR11748:SF65 220 562 0.0 T 26-04-2016 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 PANTHER PTHR11748:SF65 6 181 0.0 T 26-04-2016 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 SUPERFAMILY SSF55103 269 521 6.05E-58 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 SUPERFAMILY SSF56176 7 264 7.36E-58 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Gene3D G3DSA:1.10.45.10 476 504 4.8E-9 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Gene3D G3DSA:3.30.465.10 97 264 2.9E-17 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Gene3D G3DSA:3.30.43.10 7 89 4.3E-13 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Pfam PF01565 FAD binding domain 41 175 5.7E-33 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 SUPERFAMILY SSF46548 492 620 1.69E-20 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Gene3D G3DSA:1.10.1060.10 505 620 1.7E-19 T 26-04-2016 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Pfam PF02754 Cysteine-rich domain 833 893 0.021 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Pfam PF02754 Cysteine-rich domain 704 795 0.0057 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Pfam PF12838 4Fe-4S dicluster domain 539 608 2.6E-9 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 PANTHER PTHR11748 220 562 0.0 T 26-04-2016 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 PANTHER PTHR11748 6 181 0.0 T 26-04-2016 PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS24990 4eb84c480807e58afeae88d7b18ea8ba 938 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 514 1.8E-62 T 26-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PAM18_RS21425 46318f99f1732dccbfbaa49390c4e1fb 670 PANTHER PTHR12670 14 667 0.0 T 26-04-2016 IPR006823 Neutral/alkaline nonlysosomal ceramidase KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 PAM18_RS21425 46318f99f1732dccbfbaa49390c4e1fb 670 PANTHER PTHR12670:SF3 14 667 0.0 T 26-04-2016 PAM18_RS21425 46318f99f1732dccbfbaa49390c4e1fb 670 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 29 501 1.5E-174 T 26-04-2016 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 PAM18_RS21425 46318f99f1732dccbfbaa49390c4e1fb 670 Pfam PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal 505 665 6.0E-47 T 26-04-2016 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 PAM18_RS11790 54ec439b1ffc270894b8284f21f4675b 250 Gene3D G3DSA:3.40.50.150 20 243 4.0E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11790 54ec439b1ffc270894b8284f21f4675b 250 PANTHER PTHR10108:SF730 1 232 7.1E-65 T 26-04-2016 PAM18_RS11790 54ec439b1ffc270894b8284f21f4675b 250 SUPERFAMILY SSF53335 1 196 3.47E-32 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11790 54ec439b1ffc270894b8284f21f4675b 250 Pfam PF08241 Methyltransferase domain 42 130 1.2E-16 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS11790 54ec439b1ffc270894b8284f21f4675b 250 PANTHER PTHR10108 1 232 7.1E-65 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SUPERFAMILY SSF52172 861 979 9.96E-35 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SUPERFAMILY SSF53850 318 547 8.19E-24 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SMART SM00387 720 835 1.7E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PANTHER PTHR24423:SF382 586 979 2.3E-149 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PANTHER PTHR24423:SF382 118 153 2.3E-149 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Pfam PF00512 His Kinase A (phospho-acceptor) domain 608 673 3.5E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.30.565.10 675 840 4.4E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 774 3.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 788 3.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 813 3.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 832 3.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Pfam PF00072 Response regulator receiver domain 864 978 1.1E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SMART SM00388 607 673 2.7E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SMART SM00062 86 292 3.6E-21 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SMART SM00062 324 550 8.7E-6 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:1.10.287.130 600 669 6.6E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SUPERFAMILY SSF53850 87 286 1.0E-28 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 511 547 3.4E-5 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 330 410 3.4E-5 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 260 296 5.6E-7 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 85 169 5.6E-7 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SUPERFAMILY SSF47384 593 674 1.77E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SMART SM00448 862 978 3.0E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 SUPERFAMILY SSF55874 663 833 1.01E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.50.2300 859 979 5.8E-36 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PANTHER PTHR24423 586 979 2.3E-149 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 PANTHER PTHR24423 118 153 2.3E-149 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 189 251 6.7E-4 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Gene3D G3DSA:3.40.190.10 428 504 2.3E-8 T 26-04-2016 PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 88 284 3.9E-18 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 339 547 2.1E-16 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12380 57c813a31fb52d3a4fd822dead7aadc1 992 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 721 833 2.6E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 Gene3D G3DSA:3.55.50.10 98 189 5.9E-38 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 6.4E-105 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 SUPERFAMILY SSF69349 442 626 7.77E-42 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 506 6.8E-198 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 SUPERFAMILY SSF69279 11 184 1.28E-62 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 PANTHER PTHR32305 1 645 8.4E-287 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 SUPERFAMILY SSF69255 365 452 1.15E-35 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 523 2.2E-203 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 PANTHER PTHR32305:SF7 1 645 8.4E-287 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 SUPERFAMILY SSF69279 190 363 4.42E-36 T 26-04-2016 PAM18_RS00465 325ce58c37dcbc4d61fd01c7a075a4cc 646 Gene3D G3DSA:2.40.50.230 370 452 4.2E-43 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 PANTHER PTHR40252 2 387 3.0E-190 T 26-04-2016 PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 Pfam PF10442 FIST C domain 239 364 5.2E-12 T 26-04-2016 IPR019494 FIST, C-domain PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 SMART SM00897 34 235 3.2E-61 T 26-04-2016 IPR013702 FIST domain, N-terminal PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 Pfam PF08495 FIST N domain 37 233 5.3E-34 T 26-04-2016 IPR013702 FIST domain, N-terminal PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 SMART SM01204 236 366 3.6E-29 T 26-04-2016 IPR019494 FIST, C-domain PAM18_RS15735 141eff3543af1e897148958ce8493b47 387 PANTHER PTHR40252:SF2 2 387 3.0E-190 T 26-04-2016 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 SMART SM00283 390 651 2.3E-84 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 SMART SM01358 37 301 2.7E-38 T 26-04-2016 IPR032255 Helical bimodular sensor domain PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 PANTHER PTHR32089:SF64 288 652 1.3E-133 T 26-04-2016 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 Pfam PF00672 HAMP domain 305 371 1.8E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 650 6.3E-51 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 SUPERFAMILY SSF58104 343 652 5.23E-79 T 26-04-2016 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 Gene3D G3DSA:1.10.287.950 405 621 3.5E-59 T 26-04-2016 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 SMART SM00304 376 428 22.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 SMART SM00304 323 375 1.4E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17430 6af1732f4c141b57a7f73f21af439676 652 PANTHER PTHR32089 288 652 1.3E-133 T 26-04-2016 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 SMART SM00479 6 198 3.9E-4 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 PANTHER PTHR11046 5 470 3.1E-270 T 26-04-2016 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 Pfam PF00929 Exonuclease 9 188 6.9E-25 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 SUPERFAMILY SSF53098 7 453 9.34E-124 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 Gene3D G3DSA:3.30.420.10 4 196 1.7E-78 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 PANTHER PTHR11046:SF2 5 470 3.1E-270 T 26-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 PIRSF PIRSF000977 1 477 3.4E-202 T 26-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 PAM18_RS22520 04b9d19fdd594cf33c520b0519e22563 480 Pfam PF08411 Exonuclease C-terminal 207 470 3.9E-96 T 26-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 PANTHER PTHR24096 20 608 8.9E-249 T 26-04-2016 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 560 9.0E-11 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Gene3D G3DSA:3.40.50.980 44 219 1.2E-29 T 26-04-2016 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Gene3D G3DSA:3.40.50.980 220 367 5.7E-23 T 26-04-2016 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 PANTHER PTHR24096:SF192 20 608 8.9E-249 T 26-04-2016 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 GO:0004467|GO:0006633 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Gene3D G3DSA:3.30.300.30 473 568 1.3E-13 T 26-04-2016 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Pfam PF00501 AMP-binding enzyme 48 475 6.6E-57 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 SUPERFAMILY SSF56801 18 572 2.49E-96 T 26-04-2016 PAM18_RS10620 7ed3da71f143760ce0db5adcc0c1f6ae 608 Gene3D G3DSA:2.30.38.10 403 456 1.1E-4 T 26-04-2016 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 SUPERFAMILY SSF54593 9 167 2.82E-37 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 PANTHER PTHR10374 10 166 1.4E-111 T 26-04-2016 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 ProSitePatterns PS00935 Glyoxalase I signature 2. 109 125 - T 26-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 26-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 164 1.3E-23 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 12 168 3.9E-51 T 26-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 PANTHER PTHR10374:SF16 10 166 1.4E-111 T 26-04-2016 PAM18_RS26715 2332afe41d43202663eb4fe2f96612d8 176 Gene3D G3DSA:3.10.180.10 10 167 1.8E-60 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS23700 fa6ae1f2ea2bd43fe64f4296d04f4132 341 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 245 2.8E-86 T 26-04-2016 IPR017689 Outer membrane protein assembly factor BamD PAM18_RS23700 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 242 49.85 T 26-04-2016 IPR017689 Outer membrane protein assembly factor BamD PAM18_RS23700 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Pfam PF13525 Outer membrane lipoprotein 30 233 4.6E-79 T 26-04-2016 PAM18_RS23700 fa6ae1f2ea2bd43fe64f4296d04f4132 341 PANTHER PTHR37423 1 290 1.5E-121 T 26-04-2016 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 Pfam PF01641 SelR domain 11 128 2.3E-52 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.608 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 131 4.0E-54 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 PANTHER PTHR10173:SF18 6 132 5.4E-62 T 26-04-2016 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 PANTHER PTHR10173 6 132 5.4E-62 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PAM18_RS10955 7316100db997fa301212246dcbec6873 132 SUPERFAMILY SSF51316 7 131 1.08E-56 T 26-04-2016 IPR011057 Mss4-like PAM18_RS10955 7316100db997fa301212246dcbec6873 132 Gene3D G3DSA:2.170.150.20 4 131 2.5E-59 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 SUPERFAMILY SSF55874 493 551 8.18E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 SUPERFAMILY SSF55874 443 462 8.18E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 Pfam PF13581 Histidine kinase-like ATPase domain 494 563 1.9E-9 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 SMART SM00448 11 124 4.2E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 SUPERFAMILY SSF52172 10 150 1.71E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 198 386 3.6E-39 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 PANTHER PTHR24423 10 165 2.1E-39 T 26-04-2016 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 Gene3D G3DSA:3.40.50.2300 9 131 1.6E-37 T 26-04-2016 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 SMART SM00331 186 386 1.2E-5 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 Gene3D G3DSA:3.30.565.10 440 558 1.4E-4 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08320 ec74d955d0410bf5aa47bae37cfdf9db 571 Pfam PF00072 Response regulator receiver domain 13 124 1.7E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 SUPERFAMILY SSF63380 211 302 4.48E-19 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 Pfam PF01794 Ferric reductase like transmembrane component 40 165 3.8E-19 T 26-04-2016 IPR013130 Ferric reductase transmembrane component-like domain PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PANTHER PTHR11972:SF23 26 433 2.0E-295 T 26-04-2016 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PANTHER PTHR11972 26 433 2.0E-295 T 26-04-2016 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 Gene3D G3DSA:2.40.30.10 213 293 2.0E-15 T 26-04-2016 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 Pfam PF00175 Oxidoreductase NAD-binding domain 315 411 1.2E-6 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 Pfam PF08022 FAD-binding domain 218 300 5.0E-8 T 26-04-2016 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 SUPERFAMILY SSF52343 305 431 2.62E-24 T 26-04-2016 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 297 306 2.97E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 399 407 2.97E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 250 2.97E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 313 332 2.97E-5 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS02760 6f5aabdbe1cf0a6dff7f9c99380257dc 434 Gene3D G3DSA:3.40.50.80 294 422 3.2E-22 T 26-04-2016 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PANTHER PTHR23504:SF14 1 397 6.2E-70 T 26-04-2016 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 Pfam PF07690 Major Facilitator Superfamily 21 303 3.0E-34 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PANTHER PTHR23504 1 397 6.2E-70 T 26-04-2016 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 Gene3D G3DSA:1.20.1250.20 14 200 3.5E-34 T 26-04-2016 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 Gene3D G3DSA:1.20.1250.20 222 399 5.2E-26 T 26-04-2016 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 SUPERFAMILY SSF103473 5 398 7.67E-65 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PRINTS PR01035 Tetracycline resistance protein signature 145 167 1.2E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PRINTS PR01035 Tetracycline resistance protein signature 26 42 1.2E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PRINTS PR01035 Tetracycline resistance protein signature 115 136 1.2E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS11135 ac9c301ae80c846dea794cad32aa02f2 404 PRINTS PR01035 Tetracycline resistance protein signature 88 112 1.2E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 SUPERFAMILY SSF111369 161 263 1.96E-10 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 PANTHER PTHR30386 1 371 5.1E-194 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 PANTHER PTHR30386:SF6 1 371 5.1E-194 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 Pfam PF00529 HlyD membrane-fusion protein of T1SS 33 341 1.1E-14 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 Gene3D G3DSA:2.40.50.100 56 89 2.2E-17 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 Gene3D G3DSA:2.40.50.100 210 243 2.2E-17 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 SUPERFAMILY SSF56954 17 206 4.18E-7 T 26-04-2016 PAM18_RS26975 75f68d03430b5a77e02eff395b982a6c 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 286 9.7E-17 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 Gene3D G3DSA:3.40.50.1100 151 303 3.1E-51 T 26-04-2016 PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 Gene3D G3DSA:3.40.50.1100 1 41 3.1E-51 T 26-04-2016 PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 PANTHER PTHR10314:SF56 1 305 2.9E-177 T 26-04-2016 PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 PANTHER PTHR10314 1 305 2.9E-177 T 26-04-2016 PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 SUPERFAMILY SSF53686 1 303 2.49E-80 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 2.8E-66 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS15080 ede6c5b48e4afd06c687cdae1e30c99d 305 Gene3D G3DSA:3.40.50.1100 42 145 4.0E-31 T 26-04-2016 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 Pfam PF02954 Bacterial regulatory protein, Fis family 66 104 8.3E-14 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 87 107 2.2E-10 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 87 2.2E-10 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PIRSF PIRSF002097 9 107 5.8E-42 T 26-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 SUPERFAMILY SSF46689 24 106 8.96E-23 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 Gene3D G3DSA:1.10.10.60 36 106 1.5E-25 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PANTHER PTHR32071 29 106 7.5E-21 T 26-04-2016 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 66 78 7.6E-12 T 26-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 35 51 7.6E-12 T 26-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PAM18_RS25410 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 51 66 7.6E-12 T 26-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.261 120 287 4.9E-78 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 SMART SM00881 4 100 1.5E-36 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 5.1E-39 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 5.1E-39 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 5.1E-39 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 5.1E-39 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.720 2 119 4.7E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF52210 123 289 1.16E-57 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 Pfam PF00549 CoA-ligase 151 270 5.9E-22 T 26-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PIRSF PIRSF001553 1 290 1.9E-133 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 PANTHER PTHR11117 1 287 6.9E-198 T 26-04-2016 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 26-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF51735 1 122 1.93E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 7.7E-145 T 26-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 PAM18_RS17720 25b3afda26f1b15efac299242e14f132 295 Pfam PF02629 CoA binding domain 6 99 1.2E-31 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS17325 1135fc4344efd93763cef75f069a8e40 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.5E-152 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS17325 1135fc4344efd93763cef75f069a8e40 443 PANTHER PTHR35566:SF1 1 443 1.9E-201 T 26-04-2016 PAM18_RS17325 1135fc4344efd93763cef75f069a8e40 443 PANTHER PTHR35566 1 443 1.9E-201 T 26-04-2016 PAM18_RS17325 1135fc4344efd93763cef75f069a8e40 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 441 3.7E-142 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PANTHER PTHR23115 1 396 1.8E-274 T 26-04-2016 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF52540 6 222 4.15E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 215 301 6.1E-36 T 26-04-2016 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 303 396 9.3E-47 T 26-04-2016 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.1E-14 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.678 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.1E-15 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:3.40.50.300 4 214 6.6E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50447 208 304 1.56E-29 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-33 T 26-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 PANTHER PTHR23115:SF151 1 396 1.8E-274 T 26-04-2016 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50465 301 396 3.74E-36 T 26-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 1.7E-226 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS03415 dd971f6437737517386859d1c18ee849 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 3.4E-57 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PIRSF PIRSF019574 1 366 1.3E-143 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 Gene3D G3DSA:3.40.190.10 148 315 2.5E-69 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 Gene3D G3DSA:3.40.190.10 41 147 1.4E-11 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 SUPERFAMILY SSF53850 27 365 1.63E-105 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PANTHER PTHR30222 1 366 4.2E-229 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 3.3E-69 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 PANTHER PTHR30222:SF11 1 366 4.2E-229 T 26-04-2016 PAM18_RS01500 646d4ab6682ead97a2e2eecb32b10ee4 366 Pfam PF13416 Bacterial extracellular solute-binding protein 43 330 8.2E-34 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2336 2347 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1275 1286 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3867 3878 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 3253 3430 8.23E-47 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:1.10.1200.10 4239 4321 1.6E-29 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:1.10.1200.10 2713 2779 9.1E-28 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:1.10.1200.10 575 657 7.1E-20 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:1.10.1200.10 1644 1710 4.9E-27 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 2967 3216 7.45E-47 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 3431 3682 1.45E-51 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 1731 1908 1.85E-52 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.30.300.30 4122 4235 1.2E-33 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2733 2748 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4275 4290 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 611 626 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00668 Condensation domain 675 971 5.5E-72 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00668 Condensation domain 3248 3552 5.8E-65 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00668 Condensation domain 2787 3083 1.4E-62 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00668 Condensation domain 1726 2026 4.3E-71 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF56801 2154 2722 3.4E-154 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00501 AMP-binding enzyme 2193 2595 1.1E-89 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00501 AMP-binding enzyme 1134 1531 4.4E-101 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00501 AMP-binding enzyme 3719 4128 3.1E-83 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00501 AMP-binding enzyme 16 456 1.2E-87 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3088 3240 1.2E-47 T 26-04-2016 IPR010060 Non-ribosomal peptide synthase PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF47336 4243 4317 1.26E-20 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF47336 2701 2771 4.32E-19 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.30.300.30 447 554 1.0E-14 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 9 176 1.6E-32 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2213 2619 1.2E-126 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1156 1555 1.9E-135 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3740 4152 8.2E-123 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF13745 HxxPF-repeated domain 2049 2140 2.8E-27 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF13745 HxxPF-repeated domain 995 1082 3.4E-17 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 1914 2157 1.08E-61 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 2783 2981 1.11E-41 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095:SF173 3225 4224 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095:SF173 3195 3208 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095:SF173 1306 2764 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.30.300.30 2590 2712 1.7E-42 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.30.300.30 1526 1643 4.2E-36 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00550 Phosphopantetheine attachment site 4253 4316 7.5E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00550 Phosphopantetheine attachment site 2710 2771 2.3E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00550 Phosphopantetheine attachment site 1642 1704 4.4E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF00550 Phosphopantetheine attachment site 589 651 2.1E-11 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095 3225 4224 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095 3195 3208 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 PANTHER PTHR24095 1306 2764 0.0 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF56801 1094 1653 5.89E-159 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 3715 3875 5.6E-42 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 1129 1283 2.6E-49 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 2186 2344 1.1E-50 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF47336 1633 1705 1.18E-18 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 862 1104 2.78E-52 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:2.30.38.10 370 446 2.5E-20 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SMART SM00823 Phosphopantetheine attachment site 2709 2776 0.0081 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SMART SM00823 Phosphopantetheine attachment site 587 656 8.1E-4 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SMART SM00823 Phosphopantetheine attachment site 1640 1709 0.0045 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SMART SM00823 Phosphopantetheine attachment site 4251 4320 9.4E-4 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF52777 678 854 1.22E-50 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF56801 3684 4264 2.09E-143 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:2.30.38.10 4036 4118 1.2E-21 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:2.30.38.10 2506 2585 1.6E-22 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:2.30.38.10 1444 1521 6.7E-26 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF47336 581 687 8.51E-15 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 4136 4224 1.9E-8 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 2603 2683 2.0E-12 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 1539 1616 1.4E-6 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 SUPERFAMILY SSF56801 8 561 1.57E-118 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 1284 1443 2.6E-45 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 177 338 6.0E-33 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 2345 2505 8.3E-37 T 26-04-2016 PAM18_RS13435 990f8259d414d2c1c66adabaaf954f77 4342 Gene3D G3DSA:3.40.50.980 3876 4035 1.3E-42 T 26-04-2016 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 Gene3D G3DSA:3.40.50.300 346 570 9.4E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 Gene3D G3DSA:1.20.1560.10 19 317 5.5E-40 T 26-04-2016 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 PANTHER PTHR24222:SF0 11 585 0.0 T 26-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 SUPERFAMILY SSF90123 19 320 2.88E-45 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 558 2.7E-253 T 26-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 Pfam PF00005 ABC transporter 349 496 1.8E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 SMART SM00382 358 544 2.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 PANTHER PTHR24222 11 585 0.0 T 26-04-2016 PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 SUPERFAMILY SSF52540 322 556 3.7E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19355 e38e74a7b2512753e7c10ba86e3f5476 593 Pfam PF00664 ABC transporter transmembrane region 34 282 1.2E-12 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS20335 81d8177f0c8c73aa53afaef54b7afeb2 173 PANTHER PTHR23091:SF240 3 144 6.4E-45 T 26-04-2016 PAM18_RS20335 81d8177f0c8c73aa53afaef54b7afeb2 173 SUPERFAMILY SSF55729 3 162 1.34E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS20335 81d8177f0c8c73aa53afaef54b7afeb2 173 PANTHER PTHR23091 3 144 6.4E-45 T 26-04-2016 PAM18_RS20335 81d8177f0c8c73aa53afaef54b7afeb2 173 Pfam PF00583 Acetyltransferase (GNAT) family 52 139 1.2E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS20335 81d8177f0c8c73aa53afaef54b7afeb2 173 Gene3D G3DSA:3.40.630.30 3 147 3.3E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 139 299 1.0E-35 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 418 433 1.2E-18 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 376 393 1.2E-18 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 320 336 1.2E-18 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 293 311 1.2E-18 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 257 270 1.2E-18 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 140 473 3.2E-111 T 26-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 SUPERFAMILY SSF55347 299 462 2.44E-55 T 26-04-2016 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 SMART SM00846 138 299 5.1E-53 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PANTHER PTHR10836:SF35 126 486 1.7E-245 T 26-04-2016 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 Gene3D G3DSA:3.30.360.10 308 463 9.2E-58 T 26-04-2016 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 297 304 - T 26-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 SUPERFAMILY SSF51735 139 315 8.05E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 Gene3D G3DSA:3.40.50.720 139 307 6.8E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 304 461 1.2E-47 T 26-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS10065 ec085d9b09a7c4f54ec54d7be68a3874 488 PANTHER PTHR10836 126 486 1.7E-245 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS00635 b19694ac2978716d8727e919f36f309c 75 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 4.1E-12 T 26-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PAM18_RS00635 b19694ac2978716d8727e919f36f309c 75 PANTHER PTHR40688 1 73 5.3E-38 T 26-04-2016 PAM18_RS00635 b19694ac2978716d8727e919f36f309c 75 Gene3D G3DSA:1.10.532.10 26 64 4.5E-5 T 26-04-2016 IPR013799 STAT transcription factor, protein interaction GO:0006355|GO:0007165 PAM18_RS00635 b19694ac2978716d8727e919f36f309c 75 SUPERFAMILY SSF48092 16 72 4.32E-12 T 26-04-2016 IPR013799 STAT transcription factor, protein interaction GO:0006355|GO:0007165 PAM18_RS00635 b19694ac2978716d8727e919f36f309c 75 PANTHER PTHR40688:SF1 1 73 5.3E-38 T 26-04-2016 PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 SUPERFAMILY SSF51206 11 141 6.02E-31 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 SMART SM00419 170 218 3.0E-8 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 PANTHER PTHR24567 5 225 1.5E-49 T 26-04-2016 PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 5.2E-20 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 PANTHER PTHR24567:SF30 5 225 1.5E-49 T 26-04-2016 PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 4.4E-17 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 Gene3D G3DSA:2.60.120.10 15 147 2.8E-28 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 SUPERFAMILY SSF46785 152 225 1.82E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 SMART SM00100 16 134 8.7E-14 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS01375 a64f0d9137ddee293b28a41b88497bcf 228 Gene3D G3DSA:1.10.10.10 152 226 8.6E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 479 647 1.3E-14 T 26-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 Gene3D G3DSA:3.40.630.10 28 320 3.1E-40 T 26-04-2016 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 Gene3D G3DSA:2.40.128.130 385 647 9.4E-46 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 SUPERFAMILY SSF103515 337 647 1.16E-36 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 SUPERFAMILY SSF53187 38 286 5.43E-41 T 26-04-2016 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 Pfam PF03797 Autotransporter beta-domain 387 631 2.3E-37 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 Pfam PF04389 Peptidase family M28 82 286 7.1E-28 T 26-04-2016 IPR007484 Peptidase M28 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 PANTHER PTHR12147 56 255 4.6E-41 T 26-04-2016 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 PANTHER PTHR12147 273 318 4.6E-41 T 26-04-2016 PAM18_RS01645 7d79c75d937e298311f9dd9035fdf286 647 SMART SM00869 366 636 1.7E-37 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 Gene3D G3DSA:3.40.50.300 2 118 9.1E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 Pfam PF00196 Bacterial regulatory proteins, luxR family 797 851 4.2E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 Gene3D G3DSA:1.10.10.10 790 856 1.9E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 827 839 4.2E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 797 811 4.2E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 811 827 4.2E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 Gene3D G3DSA:1.25.40.10 421 774 1.9E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 SMART SM00421 794 851 5.9E-27 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 SUPERFAMILY SSF52540 87 188 2.0E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 SUPERFAMILY SSF52540 2 57 2.0E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 SUPERFAMILY SSF46894 790 856 7.48E-21 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS16860 af045223968d2b9b97df368c683c9c0c 857 ProSitePatterns PS00622 LuxR-type HTH domain signature. 811 838 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 9.1E-37 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 SUPERFAMILY SSF56645 5 242 6.68E-92 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 SUPERFAMILY SSF47203 230 378 1.05E-51 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.7E-27 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Gene3D G3DSA:1.20.140.10 224 378 1.8E-60 T 26-04-2016 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Gene3D G3DSA:1.10.540.10 6 120 2.5E-38 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 PANTHER PTHR10909:SF190 1 378 6.8E-257 T 26-04-2016 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 PANTHER PTHR10909 1 378 6.8E-257 T 26-04-2016 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 8.7E-46 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS23125 50c4b03826625ac38c75540e09694b36 378 Gene3D G3DSA:2.40.110.10 123 223 2.7E-42 T 26-04-2016 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 SUPERFAMILY SSF52343 204 336 3.4E-37 T 26-04-2016 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Gene3D G3DSA:3.40.50.80 207 336 4.5E-38 T 26-04-2016 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 SUPERFAMILY SSF54292 3 88 1.84E-22 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Gene3D G3DSA:3.10.20.30 2 92 7.8E-21 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PANTHER PTHR19370:SF128 34 335 5.5E-180 T 26-04-2016 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 1.8E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 1.8E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 1.8E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 161 1.8E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Gene3D G3DSA:2.40.30.10 105 201 7.4E-25 T 26-04-2016 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 SUPERFAMILY SSF63380 107 204 6.09E-24 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Pfam PF00970 Oxidoreductase FAD-binding domain 111 204 5.8E-22 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 5.9E-21 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 3.8E-26 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 9.7E-16 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS13015 5e4bd43ec8c16183941020b7ecd35200 340 PANTHER PTHR19370 34 335 5.5E-180 T 26-04-2016 PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Pfam PF09101 Exotoxin A binding 27 275 4.2E-121 T 26-04-2016 IPR015185 Exotoxin A, binding PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 SUPERFAMILY SSF56399 420 631 1.15E-79 T 26-04-2016 PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Pfam PF09102 Exotoxin A, targeting 277 409 3.0E-90 T 26-04-2016 IPR015186 Exotoxin A, middle domain PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Gene3D G3DSA:2.60.120.200 26 255 1.1E-118 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Pfam PF09009 Exotoxin A catalytic 413 638 8.3E-158 T 26-04-2016 IPR015099 Exotoxin A catalytic domain GO:0047286 PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Gene3D G3DSA:3.90.175.10 431 632 2.6E-106 T 26-04-2016 PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 Gene3D G3DSA:3.90.1350.10 267 423 5.0E-82 T 26-04-2016 IPR015186 Exotoxin A, middle domain PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 SUPERFAMILY SSF56864 277 419 4.97E-70 T 26-04-2016 IPR015186 Exotoxin A, middle domain PAM18_RS19840 eb372dc152e653ccf4cfa0d3a375d1a7 638 SUPERFAMILY SSF49899 27 276 8.86E-135 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 PANTHER PTHR31793:SF9 4 153 2.0E-43 T 26-04-2016 PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 16 124 2.2E-26 T 26-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 SUPERFAMILY SSF54637 7 142 8.01E-45 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 Gene3D G3DSA:3.10.129.10 3 142 8.6E-48 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 Pfam PF03061 Thioesterase superfamily 26 110 7.5E-19 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 PIRSF PIRSF003230 2 145 2.8E-28 T 26-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PAM18_RS27840 efe45d1eac47e10bde945293cd810a61 154 PANTHER PTHR31793 4 153 2.0E-43 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Pfam PF13616 PPIC-type PPIASE domain 282 385 1.7E-28 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 SUPERFAMILY SSF54534 285 387 5.76E-34 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Hamap MF_01183 Chaperone SurA [surA]. 12 430 33.027 T 26-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 SUPERFAMILY SSF54534 177 281 9.81E-26 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Pfam PF09312 SurA N-terminal domain 30 147 2.9E-47 T 26-04-2016 IPR015391 SurA N-terminal PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 PANTHER PTHR10657 12 429 2.0E-277 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Pfam PF00639 PPIC-type PPIASE domain 184 276 2.8E-18 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Gene3D G3DSA:1.10.3120.10 43 120 5.5E-4 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 PANTHER PTHR10657:SF16 12 429 2.0E-277 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Gene3D G3DSA:3.10.50.40 284 398 2.1E-38 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 Gene3D G3DSA:3.10.50.40 173 283 2.4E-28 T 26-04-2016 PAM18_RS03010 a1c3ef147d8db149c24b84c4057ee411 430 SUPERFAMILY SSF109998 30 206 1.28E-44 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53244 329 480 5.95E-47 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1190.10 97 330 1.4E-82 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF63418 11 95 6.28E-21 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Pfam PF01225 Mur ligase family, catalytic domain 18 94 6.0E-12 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 35.031 T 26-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 PANTHER PTHR23135:SF4 5 486 5.4E-211 T 26-04-2016 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 PANTHER PTHR23135 5 486 5.4E-211 T 26-04-2016 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53623 97 326 6.41E-77 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1390.10 6 95 6.8E-25 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.90.190.20 331 472 3.7E-54 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 479 2.2E-155 T 26-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 412 4.6E-22 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23035 da32671baca46154d92bd53fed7cb036 487 Pfam PF08245 Mur ligase middle domain 106 306 2.2E-51 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00941 Cadmium-transporting ATPase signature 296 312 1.6E-10 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00941 Cadmium-transporting ATPase signature 315 329 1.6E-10 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00941 Cadmium-transporting ATPase signature 215 235 1.6E-10 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 649 6.4E-21 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 6.4E-21 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 6.4E-21 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 431 445 6.4E-21 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 577 587 6.4E-21 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF56784 430 449 4.18E-52 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF56784 488 730 4.18E-52 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF81653 233 330 2.48E-22 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Gene3D G3DSA:3.40.1110.10 445 557 9.4E-19 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PANTHER PTHR24093:SF317 36 727 0.0 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 180 733 1.4E-175 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 PANTHER PTHR24093 36 727 0.0 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 162 733 2.0E-119 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Gene3D G3DSA:2.70.150.10 180 331 2.2E-25 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 203 456 6.5E-37 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 530 706 1.0E-38 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Gene3D G3DSA:3.40.50.1000 558 699 4.7E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Gene3D G3DSA:3.40.50.1000 404 444 4.7E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Pfam PF00702 haloacid dehalogenase-like hydrolase 429 644 1.6E-41 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Gene3D G3DSA:3.30.70.100 43 107 2.2E-5 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 433 439 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF55008 39 109 6.03E-10 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 Pfam PF00122 E1-E2 ATPase 201 422 9.5E-65 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF81665 181 234 3.27E-14 T 26-04-2016 PAM18_RS06360 7439b4c9a53b3cceb515f37c2917cfcb 738 SUPERFAMILY SSF81665 331 418 3.27E-14 T 26-04-2016 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 4 223 2.0E-104 T 26-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 PANTHER PTHR30400:SF0 1 231 1.8E-113 T 26-04-2016 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 Pfam PF00912 Transglycosylase 54 218 5.3E-46 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 224 44.699 T 26-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 Gene3D G3DSA:1.10.3810.10 53 222 1.2E-55 T 26-04-2016 PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 SUPERFAMILY SSF53955 44 222 3.66E-57 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS01910 77c4a0660b0760d0d086c65503157363 232 PANTHER PTHR30400 1 231 1.8E-113 T 26-04-2016 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 225 313 1.69E-21 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 55 78 2.47E-32 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PANTHER PTHR33751 25 79 1.9E-137 T 26-04-2016 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PANTHER PTHR33751 106 317 1.9E-137 T 26-04-2016 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 60 82 4.3E-29 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 135 218 4.3E-29 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PIRSF PIRSF000006 1 314 2.0E-106 T 26-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 120 219 2.47E-32 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 150 161 2.8E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 192 214 2.8E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 33 314 1.1E-80 T 26-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.0E-23 T 26-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 224 313 5.4E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PANTHER PTHR33751:SF1 25 79 1.9E-137 T 26-04-2016 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 PANTHER PTHR33751:SF1 106 317 1.9E-137 T 26-04-2016 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 229 307 3.2E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17915 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 140 214 4.3E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Gene3D G3DSA:3.40.50.280 751 901 7.5E-63 T 26-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SUPERFAMILY SSF56507 909 1233 5.62E-127 T 26-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Gene3D G3DSA:1.10.1240.10 655 742 9.1E-38 T 26-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 PANTHER PTHR21091 1 409 1.3E-175 T 26-04-2016 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SMART SM01018 662 745 7.7E-40 T 26-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Pfam PF02607 B12 binding domain 664 737 2.5E-24 T 26-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SUPERFAMILY SSF52242 748 900 3.01E-44 T 26-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SUPERFAMILY SSF51717 363 636 1.83E-87 T 26-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Gene3D G3DSA:3.10.196.10 965 1233 4.4E-110 T 26-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 PANTHER PTHR21091:SF111 1 409 1.3E-175 T 26-04-2016 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Pfam PF00809 Pterin binding enzyme 367 605 4.1E-56 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Gene3D G3DSA:3.20.20.330 12 370 1.2E-127 T 26-04-2016 IPR003726 Homocysteine-binding domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 TIGRFAM TIGR02082 metH: methionine synthase 20 1200 0.0 T 26-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SUPERFAMILY SSF47644 657 744 3.66E-28 T 26-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 SUPERFAMILY SSF82282 15 406 1.31E-116 T 26-04-2016 IPR003726 Homocysteine-binding domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 PIRSF PIRSF000381 8 1203 0.0 T 26-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1216 6.2E-123 T 26-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Gene3D G3DSA:3.20.20.20 371 643 1.6E-113 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Pfam PF02574 Homocysteine S-methyltransferase 24 332 9.2E-91 T 26-04-2016 IPR003726 Homocysteine-binding domain PAM18_RS16390 2b2747ee7dd56587a647c2044f0e3042 1234 Pfam PF02310 B12 binding domain 754 847 1.6E-19 T 26-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:1.20.120.420 11 165 1.4E-52 T 26-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 SUPERFAMILY SSF100950 9 347 1.17E-114 T 26-04-2016 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 341 1.4E-106 T 26-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 PANTHER PTHR10233:SF6 9 347 1.1E-162 T 26-04-2016 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 Pfam PF01008 Initiation factor 2 subunit family 53 341 3.4E-74 T 26-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:3.40.50.10470 166 350 4.3E-68 T 26-04-2016 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 PANTHER PTHR10233 9 347 1.1E-162 T 26-04-2016 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 341 2.7E-141 T 26-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PAM18_RS09240 f2717f018730c63156a81e6cb10c2e3c 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 352 40.114 T 26-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 Gene3D G3DSA:1.25.40.10 405 756 3.8E-43 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 SUPERFAMILY SSF46894 756 826 2.69E-19 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 SUPERFAMILY SSF52540 12 145 8.44E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 Pfam PF00196 Bacterial regulatory proteins, luxR family 765 819 4.0E-16 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 ProSitePatterns PS00622 LuxR-type HTH domain signature. 780 807 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 780 796 2.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 766 780 2.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 796 808 2.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 SMART SM00421 763 820 4.8E-22 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PANTHER PTHR26402:SF437 741 827 8.8E-50 T 26-04-2016 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PANTHER PTHR26402:SF437 530 661 8.8E-50 T 26-04-2016 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 SUPERFAMILY SSF48452 427 606 4.3E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 Gene3D G3DSA:1.10.10.10 757 825 7.7E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PANTHER PTHR26402 741 827 8.8E-50 T 26-04-2016 PAM18_RS07940 02a3c0e76261a792cf5ad84768d6b4bb 827 PANTHER PTHR26402 530 661 8.8E-50 T 26-04-2016 PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 SUPERFAMILY SSF53335 12 191 6.02E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 PANTHER PTHR10108 12 149 2.0E-40 T 26-04-2016 PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 PANTHER PTHR10108 264 274 2.0E-40 T 26-04-2016 PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 Gene3D G3DSA:3.40.50.150 20 188 2.7E-24 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 Pfam PF13649 Methyltransferase domain 41 136 1.0E-13 T 26-04-2016 PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 PANTHER PTHR10108:SF820 12 149 2.0E-40 T 26-04-2016 PAM18_RS15160 c71972f16272493d413deaaed5e34c47 282 PANTHER PTHR10108:SF820 264 274 2.0E-40 T 26-04-2016 PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 Gene3D G3DSA:3.40.190.10 114 235 2.7E-31 T 26-04-2016 PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 Pfam PF09084 NMT1/THI5 like 56 250 1.5E-16 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 PANTHER PTHR30024 1 315 3.2E-157 T 26-04-2016 PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 SMART SM00062 31 247 3.9E-31 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 32 313 8.5E-76 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 PANTHER PTHR30024:SF11 1 315 3.2E-157 T 26-04-2016 PAM18_RS07815 646ef3b200c241da710b91cab77d979c 323 SUPERFAMILY SSF53850 30 256 9.74E-55 T 26-04-2016 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 2.3E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 268 2.1E-93 T 26-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 Gene3D G3DSA:1.10.3720.10 19 269 1.6E-52 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 SUPERFAMILY SSF161098 15 267 1.7E-56 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 2.6E-128 T 26-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 PANTHER PTHR30406:SF6 1 270 1.6E-161 T 26-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 PAM18_RS01410 f32c298990118010e9c90480e2c0a2c0 272 PANTHER PTHR30406 1 270 1.6E-161 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 12 530 3.2E-150 T 26-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 Gene3D G3DSA:2.40.160.60 34 530 4.6E-112 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093:SF2 134 225 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093:SF2 318 522 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093:SF2 247 302 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093:SF2 2 118 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093 134 225 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093 318 522 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093 247 302 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 PANTHER PTHR35093 2 118 1.1E-170 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 SUPERFAMILY SSF56935 128 530 1.37E-59 T 26-04-2016 PAM18_RS16835 a64999fe31ed28f9ed6b4195e39b5e59 530 SUPERFAMILY SSF56935 33 98 1.37E-59 T 26-04-2016 PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 149 468 8.1E-47 T 26-04-2016 IPR005565 Haemolysin activator HlyB PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 PANTHER PTHR34597:SF2 1 547 1.8E-253 T 26-04-2016 PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 PANTHER PTHR34597 1 547 1.8E-253 T 26-04-2016 PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 Pfam PF08479 POTRA domain, ShlB-type 56 131 4.7E-27 T 26-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 Gene3D G3DSA:2.40.160.50 161 547 5.8E-103 T 26-04-2016 PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 PIRSF PIRSF029745 2 547 2.1E-151 T 26-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 PAM18_RS00205 452b7c2c7317289c3e8709141aa26967 547 Gene3D G3DSA:3.10.20.310 52 131 1.4E-26 T 26-04-2016 PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 SUPERFAMILY SSF53686 24 337 1.57E-67 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 Gene3D G3DSA:3.40.50.1100 145 336 2.2E-34 T 26-04-2016 PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 317 1.9E-43 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 PANTHER PTHR10314 1 346 1.0E-196 T 26-04-2016 PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 PANTHER PTHR10314:SF126 1 346 1.0E-196 T 26-04-2016 PAM18_RS20340 b84a7b48b896269c241b8b73b7cd52a4 365 Gene3D G3DSA:3.40.50.1100 49 144 2.9E-25 T 26-04-2016 PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 Gene3D G3DSA:3.40.50.300 16 228 8.6E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 Pfam PF00005 ABC transporter 20 169 2.6E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 PANTHER PTHR24220 5 250 3.8E-105 T 26-04-2016 PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 SUPERFAMILY SSF52540 11 228 2.46E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 SMART SM00382 29 213 1.2E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 PANTHER PTHR24220:SF309 5 250 3.8E-105 T 26-04-2016 PAM18_RS10520 48b65032f059facf568c4d28e8677a0f 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:1.10.540.10 36 159 2.4E-21 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 157 3.7E-15 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 PANTHER PTHR10909:SF154 1 482 1.5E-252 T 26-04-2016 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 SUPERFAMILY SSF47203 287 474 1.43E-43 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 454 5.9E-19 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 492 598 5.6E-22 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS19155 3401976e612652d2249428de91807fe2 606 PANTHER PTHR10909 1 482 1.5E-252 T 26-04-2016 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:1.20.140.10 268 462 1.0E-45 T 26-04-2016 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 7.2E-8 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS19155 3401976e612652d2249428de91807fe2 606 SUPERFAMILY SSF56645 38 279 3.27E-60 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Gene3D G3DSA:2.40.110.10 161 267 6.0E-28 T 26-04-2016 PAM18_RS19155 3401976e612652d2249428de91807fe2 606 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 2.3E-19 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 SUPERFAMILY SSF51735 91 258 5.56E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 PANTHER PTHR10996:SF111 1 331 1.2E-152 T 26-04-2016 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Gene3D G3DSA:3.40.50.720 1 107 5.0E-18 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 256 5.0E-35 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 PANTHER PTHR10996 1 331 1.2E-152 T 26-04-2016 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 277 9.6E-15 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Gene3D G3DSA:3.40.50.720 108 259 3.7E-39 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 SUPERFAMILY SSF52283 5 103 1.36E-15 T 26-04-2016 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 363 44.927 T 26-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 PAM18_RS18100 10879c283b0f0b44a4ee20b6d895f98c 380 Pfam PF11890 Domain of unknown function (DUF3410) 290 376 5.0E-22 T 26-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 SUPERFAMILY SSF88659 96 163 6.87E-13 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 SUPERFAMILY SSF88946 10 94 4.97E-26 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PIRSF PIRSF000770 1 246 1.2E-35 T 26-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 8 244 67.977 T 26-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Gene3D G3DSA:1.10.601.10 12 86 8.7E-19 T 26-04-2016 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Gene3D G3DSA:1.10.10.10 96 140 1.5E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PANTHER PTHR30385:SF7 16 245 2.1E-73 T 26-04-2016 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Gene3D G3DSA:1.10.10.10 178 243 3.2E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 22 241 1.4E-82 T 26-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Pfam PF04542 Sigma-70 region 2 22 94 9.0E-20 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 SUPERFAMILY SSF88659 169 244 1.83E-20 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 49 62 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PANTHER PTHR30385 16 245 2.1E-73 T 26-04-2016 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 241 3.1E-34 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Pfam PF04545 Sigma-70, region 4 190 239 7.4E-19 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PRINTS PR00046 Major sigma-70 factor signature 194 206 2.3E-11 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PRINTS PR00046 Major sigma-70 factor signature 226 237 2.3E-11 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PRINTS PR00046 Major sigma-70 factor signature 211 226 2.3E-11 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 PRINTS PR00046 Major sigma-70 factor signature 49 62 2.3E-11 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18810 8f61ba17fd6f476be651cc1031ee4f5e 247 Pfam PF04539 Sigma-70 region 3 103 162 1.3E-9 T 26-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF06744 Type VI secretion protein IcmF C-terminal 924 1124 2.5E-69 T 26-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 SUPERFAMILY SSF52540 125 294 1.42E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF14331 ImcF-related N-terminal domain 195 452 9.1E-100 T 26-04-2016 IPR025743 ImcF-related, N-terminal domain PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1174 0.0 T 26-04-2016 IPR017731 Type VI secretion system, IcmF PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 PANTHER PTHR36153:SF1 7 1176 0.0 T 26-04-2016 PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 Pfam PF06761 Intracellular multiplication and human macrophage-killing 504 797 2.0E-86 T 26-04-2016 IPR009612 ImcF-related PAM18_RS00395 30e2e885c0c2281fcad03105e9a754cc 1176 PANTHER PTHR36153 7 1176 0.0 T 26-04-2016 PAM18_RS09140 37531d42b71f4556013fbdb561dcd929 310 PANTHER PTHR30193 2 308 6.5E-162 T 26-04-2016 PAM18_RS09140 37531d42b71f4556013fbdb561dcd929 310 Gene3D G3DSA:1.10.3720.10 76 303 4.5E-52 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09140 37531d42b71f4556013fbdb561dcd929 310 SUPERFAMILY SSF161098 70 296 3.27E-49 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09140 37531d42b71f4556013fbdb561dcd929 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 301 1.3E-11 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09140 37531d42b71f4556013fbdb561dcd929 310 PANTHER PTHR30193:SF29 2 308 6.5E-162 T 26-04-2016 PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 PANTHER PTHR33121 211 506 9.6E-129 T 26-04-2016 PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 PANTHER PTHR33121 86 104 9.6E-129 T 26-04-2016 PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 Gene3D G3DSA:3.20.20.450 263 508 2.4E-80 T 26-04-2016 IPR001633 EAL domain PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 PANTHER PTHR33121:SF1 211 506 9.6E-129 T 26-04-2016 PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 PANTHER PTHR33121:SF1 86 104 9.6E-129 T 26-04-2016 PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 Pfam PF00563 EAL domain 263 498 2.8E-67 T 26-04-2016 IPR001633 EAL domain PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 SUPERFAMILY SSF141868 263 507 2.88E-77 T 26-04-2016 IPR001633 EAL domain PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 SMART SM00052 257 503 1.1E-97 T 26-04-2016 IPR001633 EAL domain PAM18_RS05645 8fd63a500704eb221fba8e19d328cf70 526 Pfam PF12792 CSS motif domain associated with EAL 42 232 6.8E-43 T 26-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF52172 743 864 5.27E-18 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00091 328 394 38.0 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00091 213 278 0.52 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00091 94 161 25.0 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PANTHER PTHR24423 6 439 0.0 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:3.30.565.10 571 725 3.3E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00387 610 721 2.1E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF12860 PAS fold 219 320 6.1E-14 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF12860 PAS fold 100 200 3.8E-9 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00388 500 566 7.4E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 718 1.1E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 674 1.1E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 1.1E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 660 1.1E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:3.40.50.2300 742 865 7.8E-17 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PANTHER PTHR24423 479 866 0.0 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF55785 199 314 3.49E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:3.30.450.20 87 195 1.5E-7 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:3.30.450.20 203 314 2.6E-11 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PANTHER PTHR24423:SF479 479 866 0.0 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 PANTHER PTHR24423:SF479 6 439 0.0 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF08448 PAS fold 335 443 3.9E-26 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SMART SM00448 744 858 2.8E-8 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:1.10.287.130 493 562 2.0E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF00072 Response regulator receiver domain 746 858 1.2E-10 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF55785 88 194 5.58E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Gene3D G3DSA:3.30.450.20 315 439 3.8E-19 T 26-04-2016 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 566 4.4E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 720 1.3E-19 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF47384 485 566 2.75E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF55785 313 439 3.49E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 324 448 3.1E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS15730 c99f421f77171f636bced197c46e8ef0 868 SUPERFAMILY SSF55874 557 721 3.8E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25635 f972e60b373e54dc58f82b33ec162451 417 PANTHER PTHR34596 1 417 7.0E-174 T 26-04-2016 PAM18_RS25635 f972e60b373e54dc58f82b33ec162451 417 Gene3D G3DSA:2.40.160.10 35 416 9.3E-138 T 26-04-2016 IPR023614 Porin domain PAM18_RS25635 f972e60b373e54dc58f82b33ec162451 417 Pfam PF03573 outer membrane porin, OprD family 31 416 1.2E-148 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS01435 3df2f6207d4c82364fd3be6fa16df26f 461 Pfam PF00474 Sodium:solute symporter family 32 413 1.8E-34 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS01435 3df2f6207d4c82364fd3be6fa16df26f 461 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 395 415 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS01435 3df2f6207d4c82364fd3be6fa16df26f 461 PANTHER PTHR11819 1 461 9.7E-208 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS01435 3df2f6207d4c82364fd3be6fa16df26f 461 PANTHER PTHR11819:SF141 1 461 9.7E-208 T 26-04-2016 PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PANTHER PTHR24322:SF409 161 193 1.1E-87 T 26-04-2016 PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PANTHER PTHR24322:SF409 16 145 1.1E-87 T 26-04-2016 PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PANTHER PTHR24322 161 193 1.1E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PANTHER PTHR24322 16 145 1.1E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.4E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 SUPERFAMILY SSF51735 10 253 6.22E-83 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 Gene3D G3DSA:3.40.50.720 5 254 6.2E-85 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.6E-65 T 26-04-2016 PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16475 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 Pfam PF01895 PhoU domain 131 214 1.7E-18 T 26-04-2016 IPR026022 PhoU domain PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 Pfam PF01895 PhoU domain 27 113 3.1E-22 T 26-04-2016 IPR026022 PhoU domain PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 PANTHER PTHR10010:SF14 1 240 1.0E-91 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 SUPERFAMILY SSF109755 13 234 9.31E-73 T 26-04-2016 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 Gene3D G3DSA:1.20.58.220 129 238 1.0E-34 T 26-04-2016 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 224 5.1E-80 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 Gene3D G3DSA:1.20.58.220 10 120 1.0E-36 T 26-04-2016 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 PANTHER PTHR10010 1 240 1.0E-91 T 26-04-2016 PAM18_RS28020 d2528b7e815ce705f5156b1b22207391 242 PIRSF PIRSF003107 8 229 1.2E-80 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 SMART SM00382 87 391 9.2E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 SMART SM00847 471 561 8.3E-37 T 26-04-2016 IPR007502 Helicase-associated domain GO:0004386 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Pfam PF04408 Helicase associated domain (HA2) 474 559 5.9E-20 T 26-04-2016 IPR007502 Helicase-associated domain GO:0004386 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Gene3D G3DSA:3.40.50.300 286 424 4.1E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Pfam PF00271 Helicase conserved C-terminal domain 294 410 1.1E-10 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 SMART SM00490 311 411 1.6E-15 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Pfam PF11898 Domain of unknown function (DUF3418) 736 1323 2.2E-200 T 26-04-2016 IPR024590 RNA helicase HrpA, C-terminal PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1323 0.0 T 26-04-2016 IPR010222 RNA helicase HrpA GO:0004004 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Gene3D G3DSA:3.40.50.300 71 228 2.7E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 SUPERFAMILY SSF52540 74 591 1.82E-104 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 601 723 4.0E-22 T 26-04-2016 IPR011709 Domain of unknown function DUF1605 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934:SF109 763 891 0.0 T 26-04-2016 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934:SF109 632 728 0.0 T 26-04-2016 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934:SF109 13 615 0.0 T 26-04-2016 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 SMART SM00487 69 254 3.7E-24 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934 763 891 0.0 T 26-04-2016 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934 632 728 0.0 T 26-04-2016 PAM18_RS08575 d9e50fd87c9dde573e62d4dcaa49a2b5 1326 PANTHER PTHR18934 13 615 0.0 T 26-04-2016 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.40.1160.10 1 245 1.9E-76 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF53633 4 241 1.31E-75 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 332 405 4.37E-25 T 26-04-2016 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 PANTHER PTHR21499 1 412 1.6E-179 T 26-04-2016 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF13840 ACT domain 339 399 1.9E-15 T 26-04-2016 IPR027795 GATS-like ACT domain PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 26-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 403 1.8E-117 T 26-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 PANTHER PTHR21499:SF27 1 412 1.6E-179 T 26-04-2016 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF00696 Amino acid kinase family 3 229 5.6E-49 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 3.7E-131 T 26-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF01842 ACT domain 268 325 2.9E-10 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 249 327 1.4E-17 T 26-04-2016 PAM18_RS21125 e938cfecf68233c7f3f8b42446c07b92 412 PIRSF PIRSF000726 57 411 4.7E-153 T 26-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 26-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 SUPERFAMILY SSF54909 65 154 3.08E-21 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 Gene3D G3DSA:1.10.10.10 2 55 2.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 Gene3D G3DSA:3.30.70.920 58 154 3.1E-30 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 6.5E-19 T 26-04-2016 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.0E-13 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 SMART SM00344 5 114 3.7E-38 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 5.2E-21 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 PANTHER PTHR30154 1 157 4.2E-93 T 26-04-2016 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 PANTHER PTHR30154:SF17 1 157 4.2E-93 T 26-04-2016 PAM18_RS15465 3271dee226a769b19d9c482c099f9532 157 SUPERFAMILY SSF46785 5 93 4.01E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04190 90b1d253dc335556ac104b4d6b8b1f17 195 Pfam PF01126 Heme oxygenase 9 192 3.2E-34 T 26-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 PAM18_RS04190 90b1d253dc335556ac104b4d6b8b1f17 195 SUPERFAMILY SSF48613 7 191 9.14E-42 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS04190 90b1d253dc335556ac104b4d6b8b1f17 195 Gene3D G3DSA:1.20.910.10 3 191 6.1E-46 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS28095 0497a3fd96b2c014c638b1a66526941e 516 PANTHER PTHR30047:SF6 1 513 0.0 T 26-04-2016 PAM18_RS28095 0497a3fd96b2c014c638b1a66526941e 516 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 493 4.8E-169 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS28095 0497a3fd96b2c014c638b1a66526941e 516 PANTHER PTHR30047 1 513 0.0 T 26-04-2016 PAM18_RS28095 0497a3fd96b2c014c638b1a66526941e 516 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 39 494 2.8E-148 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS04720 4ded22c348d9b3b047c87fb00ab5e786 197 PANTHER PTHR23327 1 155 2.2E-65 T 26-04-2016 PAM18_RS04720 4ded22c348d9b3b047c87fb00ab5e786 197 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 120 5.6E-16 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS04720 4ded22c348d9b3b047c87fb00ab5e786 197 PANTHER PTHR23327:SF0 1 155 2.2E-65 T 26-04-2016 PAM18_RS04720 4ded22c348d9b3b047c87fb00ab5e786 197 SUPERFAMILY SSF88697 1 188 6.46E-45 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS04720 4ded22c348d9b3b047c87fb00ab5e786 197 SMART SM00464 2 192 4.1E-9 T 26-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 PAM18_RS00880 d912720ef560d423590c34d0d2491ec9 200 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 172 28.442 T 26-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PAM18_RS00880 d912720ef560d423590c34d0d2491ec9 200 PANTHER PTHR35147 1 200 7.4E-113 T 26-04-2016 PAM18_RS00880 d912720ef560d423590c34d0d2491ec9 200 PANTHER PTHR35147:SF2 1 200 7.4E-113 T 26-04-2016 PAM18_RS00880 d912720ef560d423590c34d0d2491ec9 200 SUPERFAMILY SSF64438 24 169 8.42E-49 T 26-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PAM18_RS00880 d912720ef560d423590c34d0d2491ec9 200 Pfam PF03975 CheD chemotactic sensory transduction 66 168 1.1E-31 T 26-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 256 4.7E-60 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 PANTHER PTHR11712 3 421 9.0E-178 T 26-04-2016 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 377 3.0E-32 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 Gene3D G3DSA:3.40.47.10 273 421 4.1E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 PIRSF PIRSF000447 1 422 2.6E-161 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 163 179 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 SUPERFAMILY SSF53901 223 421 3.46E-64 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 419 6.5E-163 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 Gene3D G3DSA:3.40.47.10 2 269 3.8E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 SUPERFAMILY SSF53901 3 261 8.64E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS18110 119ece9498c4414ff9af4e061f66c8c6 422 SMART SM00825 Beta-ketoacyl synthase 5 421 3.0E-13 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 PANTHER PTHR12418 12 152 2.9E-48 T 26-04-2016 PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 SUPERFAMILY SSF54637 1 139 6.87E-27 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 Pfam PF03061 Thioesterase superfamily 52 127 4.3E-10 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 Gene3D G3DSA:3.10.129.10 9 139 6.3E-28 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 PANTHER PTHR12418:SF28 12 152 2.9E-48 T 26-04-2016 PAM18_RS17700 aa2ad95cd9a5c1f07f9e67c0aef317a7 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 112 2.4E-12 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS28380 eaf54c48c02d2a844a7ea61c34f704da 149 Gene3D G3DSA:3.40.630.30 2 146 3.3E-34 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS28380 eaf54c48c02d2a844a7ea61c34f704da 149 PANTHER PTHR10545 1 146 7.0E-71 T 26-04-2016 PAM18_RS28380 eaf54c48c02d2a844a7ea61c34f704da 149 SUPERFAMILY SSF55729 5 136 6.81E-30 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS28380 eaf54c48c02d2a844a7ea61c34f704da 149 PANTHER PTHR10545:SF39 1 146 7.0E-71 T 26-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 PAM18_RS28380 eaf54c48c02d2a844a7ea61c34f704da 149 Pfam PF00583 Acetyltransferase (GNAT) family 57 135 2.5E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.30.30.30 88 127 3.4E-6 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PANTHER PTHR19375 19 605 0.0 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.406 T 26-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:1.20.1270.10 529 616 5.8E-28 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 2.8E-282 T 26-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Pfam PF00012 Hsp70 protein 21 600 5.4E-183 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PANTHER PTHR19375:SF176 19 605 0.0 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 SUPERFAMILY SSF100934 504 615 2.75E-33 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:2.60.34.10 387 528 1.1E-54 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.30.420.40 128 201 5.4E-55 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.30.420.40 19 87 5.4E-55 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 SUPERFAMILY SSF53067 200 376 1.5E-47 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 SUPERFAMILY SSF100920 384 535 2.75E-50 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.90.640.10 239 310 1.6E-4 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.4E-56 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 SUPERFAMILY SSF53067 19 197 8.42E-52 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.30.420.40 202 238 2.6E-30 T 26-04-2016 PAM18_RS05725 e9c6fcea991ac13d9cf04ba79f2560b4 619 Gene3D G3DSA:3.30.420.40 314 356 2.6E-30 T 26-04-2016 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 PANTHER PTHR30290:SF14 5 531 3.0E-210 T 26-04-2016 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 PANTHER PTHR30290 5 531 3.0E-210 T 26-04-2016 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 SUPERFAMILY SSF53850 25 528 9.62E-147 T 26-04-2016 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 448 2.1E-96 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 PIRSF PIRSF002741 16 530 3.4E-104 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 Gene3D G3DSA:3.10.105.10 286 500 1.5E-63 T 26-04-2016 PAM18_RS23460 9c6bb7c000a4db6260199b50bfcf4ce8 531 Gene3D G3DSA:3.90.76.10 34 213 2.7E-46 T 26-04-2016 PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 100.425 T 26-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 SUPERFAMILY SSF55729 2 220 6.89E-94 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 204 1.1E-75 T 26-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 215 1.3E-63 T 26-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 PANTHER PTHR30098:SF2 1 225 2.0E-87 T 26-04-2016 PAM18_RS12110 a8eeb2f352f2ec375b6a25d5e396d23f 226 PANTHER PTHR30098 1 225 2.0E-87 T 26-04-2016 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 TIGRFAM TIGR02961 allantoicase: allantoicase 11 328 9.5E-142 T 26-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 Gene3D G3DSA:2.60.120.260 4 166 2.4E-59 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 Gene3D G3DSA:2.60.120.260 169 329 6.8E-57 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 PANTHER PTHR12045 8 329 1.2E-160 T 26-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 Pfam PF03561 Allantoicase repeat 187 327 1.1E-47 T 26-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 Pfam PF03561 Allantoicase repeat 20 164 3.0E-46 T 26-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 SUPERFAMILY SSF49785 5 168 8.5E-62 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 SUPERFAMILY SSF49785 177 329 3.19E-56 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 PIRSF PIRSF016516 1 331 7.2E-152 T 26-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS18510 ece1aeab24f2f4800b27184f5efbc952 332 Hamap MF_00813 Probable allantoicase [alc]. 2 330 55.682 T 26-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 668 40.492 T 26-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:1.10.486.10 384 523 4.2E-37 T 26-04-2016 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 668 0.0 T 26-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 PANTHER PTHR11070 1 650 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:3.40.50.300 551 641 1.3E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:3.40.50.300 280 383 1.3E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 PANTHER PTHR11070:SF19 1 650 0.0 T 26-04-2016 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 SUPERFAMILY SSF52540 2 640 3.25E-165 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:1.10.10.160 109 181 3.7E-18 T 26-04-2016 IPR013986 DExx box DNA helicase domain PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.7E-66 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 3.5E-73 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:3.40.50.300 182 279 9.4E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27675 af5b5411664ddd82fa5b69b245fd17ca 669 Gene3D G3DSA:3.40.50.300 2 105 9.4E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21935 45c07028364557af0cc253a27c91904d 214 Gene3D G3DSA:1.10.287.70 121 208 7.4E-14 T 26-04-2016 PAM18_RS21935 45c07028364557af0cc253a27c91904d 214 Pfam PF07885 Ion channel 126 207 2.9E-12 T 26-04-2016 IPR013099 Potassium channel domain PAM18_RS21935 45c07028364557af0cc253a27c91904d 214 SUPERFAMILY SSF81324 117 209 2.88E-16 T 26-04-2016 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PANTHER PTHR11405 298 336 1.6E-205 T 26-04-2016 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PANTHER PTHR11405 1 276 1.6E-205 T 26-04-2016 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 Gene3D G3DSA:3.40.50.1370 3 144 1.5E-55 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 Gene3D G3DSA:3.40.50.1370 145 320 1.1E-72 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 81.314 T 26-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PANTHER PTHR11405:SF44 298 336 1.6E-205 T 26-04-2016 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PANTHER PTHR11405:SF44 1 276 1.6E-205 T 26-04-2016 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 4.8E-134 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.2E-25 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.2E-25 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 3.2E-25 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.2E-25 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.0E-45 T 26-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.0E-30 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.0E-30 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.0E-30 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.0E-30 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.0E-30 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 SUPERFAMILY SSF53671 4 334 8.25E-100 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 7.3E-54 T 26-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PAM18_RS27045 23351ab4081188abc2c32ce69876d8ff 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 2.5E-12 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 PANTHER PTHR30093 1 76 8.0E-22 T 26-04-2016 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 Gene3D G3DSA:3.30.700.10 7 153 8.9E-31 T 26-04-2016 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 SUPERFAMILY SSF54523 7 146 4.39E-27 T 26-04-2016 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 Pfam PF00114 Pilin (bacterial filament) 35 152 3.1E-21 T 26-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.9E-11 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 8.3E-12 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS23585 dca9b815053ffcbf0f67ea15a8be754f 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 8.3E-12 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 PANTHER PTHR30401:SF0 2 369 8.4E-220 T 26-04-2016 PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 Gene3D G3DSA:3.40.250.10 11 131 5.7E-29 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 Gene3D G3DSA:3.40.50.300 144 255 7.4E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 363 53.851 T 26-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 SUPERFAMILY SSF52821 92 156 2.54E-18 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 SUPERFAMILY SSF52821 10 64 2.54E-18 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 SUPERFAMILY SSF52540 145 283 1.07E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 348 3.6E-106 T 26-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 SMART SM00450 2 133 7.9E-7 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS17450 116dbed4e985e1c5d599616eba03fbc2 369 PANTHER PTHR30401 2 369 8.4E-220 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SUPERFAMILY SSF141868 600 844 5.1E-85 T 26-04-2016 IPR001633 EAL domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Pfam PF00563 EAL domain 602 832 9.3E-67 T 26-04-2016 IPR001633 EAL domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SUPERFAMILY SSF55073 430 585 7.22E-49 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 420 4.0E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SMART SM00267 414 585 1.8E-63 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SUPERFAMILY SSF55785 291 412 6.28E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 PANTHER PTHR10799:SF706 308 675 9.9E-91 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 PANTHER PTHR10799:SF706 698 718 9.9E-91 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Gene3D G3DSA:3.30.70.270 427 592 9.4E-58 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SMART SM00091 303 371 7.2E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Gene3D G3DSA:3.20.20.450 600 844 6.6E-93 T 26-04-2016 IPR001633 EAL domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 582 6.5E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Gene3D G3DSA:3.30.450.20 292 412 5.1E-17 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 PANTHER PTHR10799 308 675 9.9E-91 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 PANTHER PTHR10799 698 718 9.9E-91 T 26-04-2016 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Pfam PF05228 CHASE4 domain 59 219 1.3E-18 T 26-04-2016 IPR007892 CHASE4 PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 581 1.2E-48 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS15245 7e8c02baaba3659a00d4d196b39a9f63 864 SMART SM00052 595 837 3.0E-106 T 26-04-2016 IPR001633 EAL domain PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 5.0E-7 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-16 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-16 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-16 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-16 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 26-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 PANTHER PTHR21109 1 71 2.1E-24 T 26-04-2016 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.389 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 Pfam PF01165 Ribosomal protein S21 4 56 1.7E-22 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS02935 464f0a183fbd7290eff9f75ab1766079 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.6E-25 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 Pfam PF13393 Histidyl-tRNA synthetase 12 321 5.1E-118 T 26-04-2016 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 PANTHER PTHR11476:SF5 10 360 3.7E-79 T 26-04-2016 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 Gene3D G3DSA:3.30.930.10 20 322 7.4E-70 T 26-04-2016 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 SUPERFAMILY SSF55681 7 324 2.49E-60 T 26-04-2016 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 PIRSF PIRSF001549 7 388 7.9E-48 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 324 3.5E-90 T 26-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 PANTHER PTHR11476 10 360 3.7E-79 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PAM18_RS25850 e82f209ec68531a44b2f7fd84f48676f 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 373 34.83 T 26-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF46894 136 233 5.39E-22 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:1.10.10.10 134 235 1.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00072 Response regulator receiver domain 8 120 5.3E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:3.40.50.2300 4 129 6.3E-41 T 26-04-2016 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 PANTHER PTHR26402:SF528 6 242 2.4E-166 T 26-04-2016 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 PANTHER PTHR26402 6 242 2.4E-166 T 26-04-2016 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.1E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF52172 4 129 1.99E-42 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00448 6 119 1.5E-43 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09125 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00862 156 232 1.3E-15 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS05060 43feb2a1a44f5e63b6df1d4f9022fead 192 Gene3D G3DSA:3.40.630.30 10 191 2.1E-48 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS05060 43feb2a1a44f5e63b6df1d4f9022fead 192 PANTHER PTHR13256 12 192 5.2E-57 T 26-04-2016 PAM18_RS05060 43feb2a1a44f5e63b6df1d4f9022fead 192 PANTHER PTHR13256:SF19 12 192 5.2E-57 T 26-04-2016 PAM18_RS05060 43feb2a1a44f5e63b6df1d4f9022fead 192 Pfam PF13302 Acetyltransferase (GNAT) domain 17 158 3.5E-33 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS05060 43feb2a1a44f5e63b6df1d4f9022fead 192 SUPERFAMILY SSF55729 11 159 2.93E-39 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS14035 60964406ef2b0297d673ec90d1a2e6fa 295 PANTHER PTHR30468:SF18 7 295 1.6E-188 T 26-04-2016 PAM18_RS14035 60964406ef2b0297d673ec90d1a2e6fa 295 PANTHER PTHR30468 7 295 1.6E-188 T 26-04-2016 PAM18_RS14035 60964406ef2b0297d673ec90d1a2e6fa 295 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 17 288 2.6E-66 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS14035 60964406ef2b0297d673ec90d1a2e6fa 295 Gene3D G3DSA:3.60.130.10 12 295 6.5E-91 T 26-04-2016 PAM18_RS14035 60964406ef2b0297d673ec90d1a2e6fa 295 SUPERFAMILY SSF51197 15 295 6.87E-88 T 26-04-2016 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 26-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 SUPERFAMILY SSF141091 1 102 9.03E-39 T 26-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 7.6E-43 T 26-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.3E-40 T 26-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.193 T 26-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23820 afffc16d668532bfbdd991c41758b044 103 PANTHER PTHR21349 1 102 3.3E-46 T 26-04-2016 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:1.20.5.440 92 134 6.9E-14 T 26-04-2016 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 4.6E-30 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 PANTHER PTHR13822:SF7 4 139 2.0E-42 T 26-04-2016 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 1.2E-7 T 26-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF46604 89 137 2.48E-11 T 26-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:2.60.15.10 4 91 1.1E-28 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.9E-45 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 9.0E-38 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF51344 4 86 9.55E-24 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.495 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29035 c708b21f2427fc71bcde751da15b347d 141 PANTHER PTHR13822 4 139 2.0E-42 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 321 1.0E-108 T 26-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:2.40.240.10 461 551 1.8E-31 T 26-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PANTHER PTHR11451 268 555 5.1E-227 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PANTHER PTHR11451 11 248 5.1E-227 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 341 532 2.9E-58 T 26-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 SUPERFAMILY SSF50715 341 552 4.34E-69 T 26-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PANTHER PTHR11451:SF29 268 555 5.1E-227 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PANTHER PTHR11451:SF29 11 248 5.1E-227 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 54.044 T 26-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 553 4.6E-229 T 26-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 221 2.7E-8 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 2.7E-8 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 2.7E-8 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 57 2.7E-8 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:1.10.1160.10 264 339 2.6E-35 T 26-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:3.40.50.620 213 263 4.4E-42 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:3.40.50.620 28 97 4.4E-42 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:3.90.800.10 102 210 3.5E-45 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 SUPERFAMILY SSF52374 28 347 8.16E-98 T 26-04-2016 PAM18_RS16680 a78ab182c0fb0c775d7ff6363f51ebdf 556 Gene3D G3DSA:2.40.240.10 349 460 2.1E-44 T 26-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 1.2E-23 T 26-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 304 1.0E-79 T 26-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 298 1.9E-12 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 205 1.3E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 PIRSF PIRSF000006 1 305 4.9E-107 T 26-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 PANTHER PTHR33751:SF1 97 308 2.3E-136 T 26-04-2016 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 PANTHER PTHR33751:SF1 25 79 2.3E-136 T 26-04-2016 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 PANTHER PTHR33751 97 308 2.3E-136 T 26-04-2016 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 PANTHER PTHR33751 25 79 2.3E-136 T 26-04-2016 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 215 304 6.0E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 215 304 1.72E-22 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 55 78 3.1E-29 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 111 207 3.1E-29 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 126 207 4.5E-28 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17895 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 60 82 4.5E-28 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS20530 70c66d6fd76fb98a40245576afb29084 326 Gene3D G3DSA:3.20.20.70 3 304 2.5E-74 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS20530 70c66d6fd76fb98a40245576afb29084 326 PANTHER PTHR32332 1 322 1.3E-203 T 26-04-2016 PAM18_RS20530 70c66d6fd76fb98a40245576afb29084 326 PANTHER PTHR32332:SF22 1 322 1.3E-203 T 26-04-2016 PAM18_RS20530 70c66d6fd76fb98a40245576afb29084 326 Pfam PF03060 Nitronate monooxygenase 4 309 2.5E-53 T 26-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PAM18_RS20530 70c66d6fd76fb98a40245576afb29084 326 SUPERFAMILY SSF51412 3 316 2.49E-66 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF52402 5 209 3.31E-51 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.756 T 26-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 26-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:1.20.5.470 369 395 3.6E-6 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF69864 175 400 1.96E-93 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 Pfam PF00764 Arginosuccinate synthase 8 397 8.1E-155 T 26-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 26-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 PANTHER PTHR11587:SF2 1 405 3.2E-234 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 PANTHER PTHR11587 1 405 3.2E-234 T 26-04-2016 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.90.1260.10 160 359 7.8E-97 T 26-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.8E-142 T 26-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS07520 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.40.50.620 5 159 1.9E-67 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 PANTHER PTHR11019 1 26 1.5E-202 T 26-04-2016 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 PANTHER PTHR11019 51 317 1.5E-202 T 26-04-2016 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 Pfam PF01965 DJ-1/PfpI family 22 171 8.5E-14 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 PANTHER PTHR11019:SF90 1 26 1.5E-202 T 26-04-2016 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 PANTHER PTHR11019:SF90 51 317 1.5E-202 T 26-04-2016 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 Pfam PF12833 Helix-turn-helix domain 232 309 9.4E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 SUPERFAMILY SSF46689 262 310 8.51E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 Gene3D G3DSA:1.10.10.60 208 263 8.7E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 SMART SM00342 226 309 4.4E-26 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 Gene3D G3DSA:1.10.10.60 264 310 1.7E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 SUPERFAMILY SSF52317 5 190 1.67E-46 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS28165 7130cb56a7bae5d81bba8c5d795f7cae 336 Gene3D G3DSA:3.40.50.880 6 200 5.5E-42 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS06055 284c55f41a1465c81a9f02e0cc8304a4 249 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 229 3.8E-15 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS06055 284c55f41a1465c81a9f02e0cc8304a4 249 SUPERFAMILY SSF52266 51 239 3.66E-30 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS06055 284c55f41a1465c81a9f02e0cc8304a4 249 Gene3D G3DSA:3.40.50.1110 52 240 9.4E-23 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF01883 Domain of unknown function DUF59 6 78 4.2E-16 T 26-04-2016 IPR002744 Domain of unknown function DUF59 PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF52540 89 327 8.55E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 26-04-2016 IPR000808 Mrp, conserved site GO:0005524 PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 6.2E-100 T 26-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 36.457 T 26-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 PANTHER PTHR23264 1 346 1.8E-164 T 26-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 PANTHER PTHR23264:SF19 1 346 1.8E-164 T 26-04-2016 PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 Gene3D G3DSA:3.40.50.300 87 341 6.3E-106 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07635 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF117916 4 82 1.05E-14 T 26-04-2016 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 SUPERFAMILY SSF51556 58 372 2.54E-100 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 PANTHER PTHR11271:SF37 5 448 5.4E-263 T 26-04-2016 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 Gene3D G3DSA:3.20.20.140 67 391 3.1E-108 T 26-04-2016 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 Gene3D G3DSA:2.30.40.10 1 66 7.5E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 Pfam PF01979 Amidohydrolase family 55 418 3.3E-60 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 PANTHER PTHR11271 5 448 5.4E-263 T 26-04-2016 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 SUPERFAMILY SSF51338 373 446 5.64E-20 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS00720 f18b1d21dfdd2fad2e352ffc167985b2 449 SUPERFAMILY SSF51338 4 58 5.64E-20 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806:SF2 559 600 3.3E-141 T 26-04-2016 PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806:SF2 334 418 3.3E-141 T 26-04-2016 PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806:SF2 1 318 3.3E-141 T 26-04-2016 PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 SUPERFAMILY SSF117892 60 208 2.75E-9 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806 559 600 3.3E-141 T 26-04-2016 IPR027705 Flotillin family PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806 334 418 3.3E-141 T 26-04-2016 IPR027705 Flotillin family PAM18_RS06165 d765a61ebec6fb470dd37afd1ee6882b 688 PANTHER PTHR13806 1 318 3.3E-141 T 26-04-2016 IPR027705 Flotillin family PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 330 1.2E-49 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 PANTHER PTHR10696:SF27 31 333 7.3E-173 T 26-04-2016 PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 PANTHER PTHR10696 31 333 7.3E-173 T 26-04-2016 PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 SUPERFAMILY SSF51197 27 332 5.49E-84 T 26-04-2016 PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 Gene3D G3DSA:3.60.130.10 37 180 4.6E-67 T 26-04-2016 PAM18_RS14070 5e458073009b03d6dc1007cc0c650989 339 Gene3D G3DSA:3.60.130.10 212 333 4.6E-67 T 26-04-2016 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 Gene3D G3DSA:1.10.1060.10 223 354 2.5E-26 T 26-04-2016 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 PANTHER PTHR11921 217 634 2.4E-181 T 26-04-2016 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 323 334 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 245 256 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 Pfam PF02754 Cysteine-rich domain 402 481 0.0077 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 Pfam PF02754 Cysteine-rich domain 525 611 9.7E-14 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 SUPERFAMILY SSF46548 222 352 2.27E-19 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 PANTHER PTHR11921:SF22 217 634 2.4E-181 T 26-04-2016 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 1.3E-89 T 26-04-2016 IPR021872 Protein of unknown function DUF3483 PAM18_RS28215 9b40c30b6f722bec373923852a778355 653 Pfam PF13183 4Fe-4S dicluster domain 242 336 8.9E-12 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS03585 6fff53bebc6f5fdb021f3e2683169186 520 Gene3D G3DSA:1.10.443.10 186 389 1.9E-15 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS03585 6fff53bebc6f5fdb021f3e2683169186 520 Pfam PF00589 Phage integrase family 325 384 2.6E-5 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS03585 6fff53bebc6f5fdb021f3e2683169186 520 SUPERFAMILY SSF56349 187 389 4.41E-13 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 Pfam PF12833 Helix-turn-helix domain 262 339 1.3E-14 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 PANTHER PTHR11019 126 346 1.2E-47 T 26-04-2016 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 5.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 5.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 3.5E-45 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 Gene3D G3DSA:1.10.10.60 291 340 3.6E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 SUPERFAMILY SSF46689 291 341 2.37E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 PANTHER PTHR11019:SF75 126 346 1.2E-47 T 26-04-2016 PAM18_RS12795 aaeeac56a1e444d9d380d5ce5da07209 361 SMART SM00342 255 338 2.0E-17 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 1.2E-8 T 26-04-2016 IPR024973 ESPR domain PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 SMART SM00912 51 166 4.2E-45 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 88 162 1.3E-27 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 SUPERFAMILY SSF51126 45 343 2.17E-43 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 Pfam PF05860 haemagglutination activity domain 53 165 5.1E-27 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 Pfam PF07581 The GLUG motif 718 741 5.3E-5 T 26-04-2016 IPR011493 GLUG PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 Pfam PF07581 The GLUG motif 647 677 0.0025 T 26-04-2016 IPR011493 GLUG PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 Gene3D G3DSA:2.160.20.10 89 300 1.5E-19 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 PANTHER PTHR12338 781 1018 1.0E-212 T 26-04-2016 PAM18_RS04370 c7b617dc55c538327bc3695993d74be1 1018 PANTHER PTHR12338 1 765 1.0E-212 T 26-04-2016 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 PANTHER PTHR10996 1 328 2.4E-164 T 26-04-2016 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 Gene3D G3DSA:3.40.50.720 8 118 2.1E-31 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 26-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 3.8E-32 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 SUPERFAMILY SSF51735 102 298 1.84E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 Gene3D G3DSA:3.40.50.720 119 297 1.1E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.7E-60 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 SUPERFAMILY SSF52283 2 134 2.02E-38 T 26-04-2016 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 PANTHER PTHR10996:SF161 1 328 2.4E-164 T 26-04-2016 PAM18_RS20990 730f253eba41cfe5a5181cde90e7dd27 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 1.1E-25 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 SUPERFAMILY SSF51735 8 168 5.16E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 PANTHER PTHR22981 1 294 5.2E-183 T 26-04-2016 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 PIRSF PIRSF000103 4 296 1.0E-68 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 SUPERFAMILY SSF48179 168 292 1.93E-27 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 PANTHER PTHR22981:SF48 1 294 5.2E-183 T 26-04-2016 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 Gene3D G3DSA:3.40.50.720 7 171 5.0E-54 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 Gene3D G3DSA:1.10.1040.10 172 293 2.3E-29 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS08490 7560bfe19bcf35a15ae772347ad5b739 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 2.0E-46 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 PANTHER PTHR11773 16 959 0.0 T 26-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 SUPERFAMILY SSF53383 929 952 2.16E-107 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 SUPERFAMILY SSF53383 466 887 2.16E-107 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 Gene3D G3DSA:3.40.640.10 90 310 4.1E-15 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 Gene3D G3DSA:3.40.640.10 507 743 6.2E-40 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 PANTHER PTHR11773:SF1 16 959 0.0 T 26-04-2016 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 956 26.209 T 26-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 Pfam PF02347 Glycine cleavage system P-protein 482 743 5.1E-10 T 26-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 Pfam PF02347 Glycine cleavage system P-protein 21 444 7.9E-181 T 26-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 950 0.0 T 26-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS13325 93ecd7f7b217f78c779db90730981d5a 959 SUPERFAMILY SSF53383 21 446 4.65E-99 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 SUPERFAMILY SSF89796 3 392 3.01E-124 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 Gene3D G3DSA:3.40.50.10540 2 216 1.5E-107 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 Gene3D G3DSA:3.40.50.10540 301 392 1.5E-107 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 PANTHER PTHR24023 80 380 5.7E-56 T 26-04-2016 PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 PANTHER PTHR24023:SF577 80 380 5.7E-56 T 26-04-2016 PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 Pfam PF02515 CoA-transferase family III 5 360 3.7E-101 T 26-04-2016 IPR003673 CoA-transferase family III GO:0003824 PAM18_RS19650 61e37f08801301a088086d0938a41d0f 393 Gene3D G3DSA:3.30.1540.10 233 300 2.1E-10 T 26-04-2016 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 Gene3D G3DSA:1.10.10.60 5 58 1.5E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 PANTHER PTHR30055 1 167 7.2E-75 T 26-04-2016 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 PANTHER PTHR30055:SF53 1 167 7.2E-75 T 26-04-2016 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 SUPERFAMILY SSF46689 3 80 3.13E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.6E-14 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 SUPERFAMILY SSF48498 76 199 2.77E-33 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 199 3.8E-51 T 26-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PAM18_RS16285 9b92e228938332ed199489e0219e0fe4 216 Gene3D G3DSA:1.10.357.10 59 199 8.6E-43 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 616 758 1.8E-47 T 26-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 SUPERFAMILY SSF69255 364 451 1.31E-33 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 1.9E-160 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 1.6E-33 T 26-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 SUPERFAMILY SSF69279 197 365 1.14E-31 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 5.2E-75 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 Gene3D G3DSA:2.40.50.230 370 451 1.5E-39 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 PANTHER PTHR32305:SF11 6 903 0.0 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 Gene3D G3DSA:3.55.50.10 96 183 2.2E-24 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 SUPERFAMILY SSF69279 9 182 1.53E-47 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 PANTHER PTHR32305 6 903 0.0 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 SUPERFAMILY SSF69349 442 493 1.8E-9 T 26-04-2016 PAM18_RS01305 1ed9cbf6726cec68089c21124666402a 1019 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 1.6E-120 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 PANTHER PTHR12083:SF8 399 513 2.8E-199 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 PANTHER PTHR12083:SF8 8 371 2.8E-199 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 Gene3D G3DSA:3.90.1200.10 125 289 9.4E-10 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 Pfam PF13671 AAA domain 338 487 1.5E-37 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 Gene3D G3DSA:3.40.50.300 339 479 3.0E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 PANTHER PTHR12083 399 513 2.8E-199 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 PANTHER PTHR12083 8 371 2.8E-199 T 26-04-2016 PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 SUPERFAMILY SSF56112 12 294 4.96E-24 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 SUPERFAMILY SSF52540 339 516 4.72E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24620 92f3e68393dc858965b390dabab0acd1 520 Pfam PF01636 Phosphotransferase enzyme family 123 279 9.8E-6 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 SUPERFAMILY SSF46785 7 64 2.02E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 Gene3D G3DSA:1.10.10.10 6 53 1.6E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 Gene3D G3DSA:3.40.50.1360 77 221 4.4E-15 T 26-04-2016 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 SUPERFAMILY SSF100950 76 233 2.51E-31 T 26-04-2016 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 SMART SM01134 72 233 7.0E-60 T 26-04-2016 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 Pfam PF00455 DeoR C terminal sensor domain 78 232 4.8E-44 T 26-04-2016 IPR014036 DeoR C-terminal sensor domain PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 9.3E-15 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 26-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 SMART SM00420 9 61 9.0E-14 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.7E-5 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.7E-5 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 PANTHER PTHR30363 3 255 9.1E-158 T 26-04-2016 PAM18_RS29020 d16866c1829f5d2d7edbceb1d5bcfda3 256 PANTHER PTHR30363:SF15 3 255 9.1E-158 T 26-04-2016 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 2.4E-31 T 26-04-2016 IPR025121 GTPase HflX, N-terminal PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF52540 199 374 4.94E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 3.2E-10 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 3.2E-10 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 3.2E-10 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.3E-29 T 26-04-2016 IPR032305 GTP-binding protein, middle domain PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PANTHER PTHR10229:SF0 2 433 5.7E-183 T 26-04-2016 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 4.2E-155 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 Gene3D G3DSA:3.40.50.300 199 363 4.0E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PIRSF PIRSF006809 5 422 2.2E-149 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF54980 370 420 4.24E-8 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 PANTHER PTHR10229 2 433 5.7E-183 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 Hamap MF_00900 GTPase HflX [hflX]. 28 391 47.028 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 PAM18_RS25870 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF01926 50S ribosome-binding GTPase 201 319 3.7E-21 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS19965 b8a71d4511ce558b9109ed181b917354 106 Gene3D G3DSA:3.90.1650.10 1 105 2.9E-59 T 26-04-2016 IPR023117 PA1123-like domain PAM18_RS19965 b8a71d4511ce558b9109ed181b917354 106 SUPERFAMILY SSF160477 1 105 6.8E-56 T 26-04-2016 IPR023117 PA1123-like domain PAM18_RS19965 b8a71d4511ce558b9109ed181b917354 106 Pfam PF09634 Protein of unknown function (DUF2025) 1 105 4.1E-59 T 26-04-2016 IPR023117 PA1123-like domain PAM18_RS10815 1078828c5afc16a5c07e83aa83d22dd6 323 PANTHER PTHR30582 31 309 2.7E-103 T 26-04-2016 PAM18_RS10815 1078828c5afc16a5c07e83aa83d22dd6 323 SUPERFAMILY SSF141523 96 230 4.32E-31 T 26-04-2016 PAM18_RS10815 1078828c5afc16a5c07e83aa83d22dd6 323 Gene3D G3DSA:2.40.440.10 90 232 6.3E-35 T 26-04-2016 PAM18_RS10815 1078828c5afc16a5c07e83aa83d22dd6 323 Pfam PF03734 L,D-transpeptidase catalytic domain 98 230 8.9E-16 T 26-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PAM18_RS10815 1078828c5afc16a5c07e83aa83d22dd6 323 PANTHER PTHR30582:SF1 31 309 2.7E-103 T 26-04-2016 PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 158 5.7E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 SMART SM00091 33 102 0.0022 T 26-04-2016 IPR000014 PAS domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 Gene3D G3DSA:3.30.450.20 27 149 1.8E-26 T 26-04-2016 PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 Gene3D G3DSA:3.30.70.270 164 322 2.4E-52 T 26-04-2016 PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 Pfam PF08447 PAS fold 57 145 2.5E-20 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 PANTHER PTHR10799 45 316 1.2E-27 T 26-04-2016 PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 321 1.8E-43 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 SMART SM00267 151 323 1.4E-51 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 SUPERFAMILY SSF55073 167 322 3.3E-46 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 SUPERFAMILY SSF55785 39 153 1.21E-18 T 26-04-2016 IPR000014 PAS domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 SMART SM00086 108 151 4.3E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 318 2.7E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01450 a8ba5090ea6bad896d79680cb3f2285b 323 PANTHER PTHR10799:SF750 45 316 1.2E-27 T 26-04-2016 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 PANTHER PTHR11019 241 343 9.4E-33 T 26-04-2016 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 Gene3D G3DSA:1.10.10.60 288 338 3.6E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 PANTHER PTHR11019:SF52 241 343 9.4E-33 T 26-04-2016 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 SMART SM00342 253 335 1.5E-16 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 Pfam PF12833 Helix-turn-helix domain 259 337 1.2E-16 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 SUPERFAMILY SSF46689 288 339 2.06E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 6.9E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 6.9E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS15120 6edeebced007ce0391f07a76646dca59 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 210 1.8E-44 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS07970 c208f37acbf593dd1c4a904e87367633 132 Pfam PF10990 Protein of unknown function (DUF2809) 40 122 1.8E-18 T 26-04-2016 IPR021257 Protein of unknown function DUF2809 PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 PANTHER PTHR30489 228 420 1.6E-132 T 26-04-2016 PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 PANTHER PTHR30489 1 204 1.6E-132 T 26-04-2016 PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 PANTHER PTHR30489:SF2 228 420 1.6E-132 T 26-04-2016 PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 PANTHER PTHR30489:SF2 1 204 1.6E-132 T 26-04-2016 PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 Pfam PF12704 MacB-like periplasmic core domain 19 260 1.3E-12 T 26-04-2016 IPR025857 MacB-like periplasmic core domain PAM18_RS04460 c6e867d462094d3ac9e8511fcde63e14 421 Pfam PF02687 FtsX-like permease family 294 412 2.2E-20 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS18250 f507412d903035669dae64a986e2522f 244 Gene3D G3DSA:3.40.50.300 1 226 5.0E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18250 f507412d903035669dae64a986e2522f 244 SMART SM00382 26 213 4.8E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18250 f507412d903035669dae64a986e2522f 244 PIRSF PIRSF039085 1 243 1.8E-102 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS18250 f507412d903035669dae64a986e2522f 244 PANTHER PTHR24220 3 244 5.0E-190 T 26-04-2016 PAM18_RS18250 f507412d903035669dae64a986e2522f 244 Pfam PF00005 ABC transporter 17 165 1.5E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS18250 f507412d903035669dae64a986e2522f 244 SUPERFAMILY SSF52540 1 226 3.59E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18250 f507412d903035669dae64a986e2522f 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS18250 f507412d903035669dae64a986e2522f 244 PANTHER PTHR24220:SF317 3 244 5.0E-190 T 26-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 Pfam PF12680 SnoaL-like domain 249 357 6.8E-7 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 Pfam PF01738 Dienelactone hydrolase family 16 230 3.5E-46 T 26-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 Gene3D G3DSA:3.40.50.1820 3 232 1.1E-46 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 PANTHER PTHR32083:SF28 219 410 5.9E-74 T 26-04-2016 PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 PANTHER PTHR32083 219 410 5.9E-74 T 26-04-2016 PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 SUPERFAMILY SSF54427 238 380 2.15E-23 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 Gene3D G3DSA:3.10.450.50 243 379 9.3E-18 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS11775 59fc0506e9764e6083fd8c0382a507ea 413 SUPERFAMILY SSF53474 2 230 1.73E-41 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 SMART SM00729 16 219 2.4E-5 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 Pfam PF13186 Iron-sulfur cluster-binding domain 249 314 8.5E-8 T 26-04-2016 IPR023885 4Fe4S-binding SPASM domain PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 PIRSF PIRSF037420 2 361 1.3E-126 T 26-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 26-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 PANTHER PTHR11228 1 351 1.8E-129 T 26-04-2016 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 PANTHER PTHR11228:SF32 1 351 1.8E-129 T 26-04-2016 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 11 371 3.2E-188 T 26-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 SUPERFAMILY SSF102114 14 323 9.03E-76 T 26-04-2016 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 381 196.963 T 26-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 Pfam PF04055 Radical SAM superfamily 22 177 1.3E-22 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 Pfam PF13353 4Fe-4S single cluster domain 23 106 1.4E-5 T 26-04-2016 PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 257 341 1.9E-8 T 26-04-2016 IPR023885 4Fe4S-binding SPASM domain PAM18_RS15665 2c882da58d27454ca9b313b7580cd453 381 Gene3D G3DSA:3.20.20.70 13 332 4.4E-69 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 Pfam PF07690 Major Facilitator Superfamily 12 346 1.6E-35 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 PANTHER PTHR23501:SF80 10 391 1.7E-183 T 26-04-2016 PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 PANTHER PTHR23501 10 391 1.7E-183 T 26-04-2016 PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 Gene3D G3DSA:1.20.1250.20 208 376 3.3E-10 T 26-04-2016 PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 SUPERFAMILY SSF103473 10 379 6.28E-45 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS27285 d049710a23ae0da7ea85c65c3dd49c1b 397 Gene3D G3DSA:1.20.1250.20 10 192 1.3E-19 T 26-04-2016 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 197 1.4E-60 T 26-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 PANTHER PTHR20857 6 200 1.5E-54 T 26-04-2016 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 207 24.907 T 26-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 SUPERFAMILY SSF51391 3 200 1.23E-57 T 26-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 186 1.8E-53 T 26-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 PANTHER PTHR20857:SF15 6 200 1.5E-54 T 26-04-2016 PAM18_RS04895 fda5ab422866400c12fff1808aa3e162 209 Gene3D G3DSA:3.20.20.70 4 203 2.2E-59 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 PANTHER PTHR22683 217 799 2.4E-272 T 26-04-2016 PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 PANTHER PTHR22683:SF41 217 799 2.4E-272 T 26-04-2016 PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 Gene3D G3DSA:3.40.50.300 390 695 4.1E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 Pfam PF01580 FtsK/SpoIIIE family 418 628 3.5E-63 T 26-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 Pfam PF09397 Ftsk gamma domain 738 798 1.5E-26 T 26-04-2016 IPR018541 FtsK gamma domain PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 193 3.4E-40 T 26-04-2016 IPR025199 DNA translocase FtsK, 4TM region PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 SUPERFAMILY SSF52540 389 701 2.52E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 SUPERFAMILY SSF46785 736 799 1.29E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12120 92e34ad165c7c7b7e66f8e995523f16a 804 SMART SM00843 736 801 7.7E-38 T 26-04-2016 IPR018541 FtsK gamma domain PAM18_RS28305 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 2.1E-40 T 26-04-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28305 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 84 6.5E-37 T 26-04-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 Gene3D G3DSA:1.10.10.60 60 80 1.0E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 PANTHER PTHR30328:SF16 2 221 3.3E-150 T 26-04-2016 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 Gene3D G3DSA:1.10.357.10 81 218 7.5E-28 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 SUPERFAMILY SSF48498 96 221 7.12E-34 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 2.0E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.0E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 SUPERFAMILY SSF46689 17 91 1.03E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 PANTHER PTHR30328 2 221 3.3E-150 T 26-04-2016 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 6.2E-14 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01205 191cee0b8afe80f9c3493f0f89e0d40d 222 Gene3D G3DSA:1.10.10.60 16 59 1.4E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 SUPERFAMILY SSF51905 355 415 5.4E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 SUPERFAMILY SSF51905 29 254 5.4E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 Pfam PF01266 FAD dependent oxidoreductase 30 392 1.3E-49 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 Gene3D G3DSA:3.50.50.60 174 253 5.4E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 Gene3D G3DSA:3.50.50.60 19 120 5.4E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 Gene3D G3DSA:3.50.50.60 355 404 5.4E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 PANTHER PTHR13847:SF208 1 454 4.2E-292 T 26-04-2016 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 PANTHER PTHR13847 1 454 4.2E-292 T 26-04-2016 PAM18_RS17835 3afb753b9dfa1dd9f4ef33736bec13de 465 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 1.2E-250 T 26-04-2016 IPR017715 Putative aminophosphonate oxidoreductase PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:2.102.10.10 29 132 1.4E-19 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 PANTHER PTHR21266:SF2 4 374 3.0E-41 T 26-04-2016 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:3.90.380.10 133 363 1.3E-15 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 43 58 8.6E-9 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 13 38 8.6E-9 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 8.6E-9 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF50022 3 142 5.24E-36 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 371 1.3E-15 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF55961 142 373 1.96E-29 T 26-04-2016 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00355 Rieske [2Fe-2S] domain 29 108 4.1E-13 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS20180 b8400f3085f74960b6fcefb0becf4699 376 PANTHER PTHR21266 4 374 3.0E-41 T 26-04-2016 PAM18_RS08245 07c11bbfd31944e916a9aae7a636e574 115 Pfam PF07472 Fucose-binding lectin II (PA-IIL) 7 114 3.6E-46 T 26-04-2016 IPR010907 Calcium-mediated lectin PAM18_RS08245 07c11bbfd31944e916a9aae7a636e574 115 Gene3D G3DSA:2.60.120.400 3 115 6.3E-49 T 26-04-2016 IPR010907 Calcium-mediated lectin PAM18_RS08245 07c11bbfd31944e916a9aae7a636e574 115 PIRSF PIRSF029595 1 115 6.6E-65 T 26-04-2016 IPR016927 Lectin, sugar-binding PAM18_RS08245 07c11bbfd31944e916a9aae7a636e574 115 SUPERFAMILY SSF82026 3 115 1.19E-46 T 26-04-2016 IPR010907 Calcium-mediated lectin PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 4.1E-56 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 4.1E-56 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 511 4.1E-56 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 4.1E-56 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 SUPERFAMILY SSF55785 167 275 8.38E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 SUPERFAMILY SSF58104 353 634 6.28E-74 T 26-04-2016 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 Gene3D G3DSA:3.30.450.20 164 216 4.2E-7 T 26-04-2016 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 SMART SM00283 386 633 1.2E-90 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 632 1.9E-61 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PANTHER PTHR32089:SF63 174 636 3.6E-171 T 26-04-2016 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 PANTHER PTHR32089 174 636 3.6E-171 T 26-04-2016 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 Gene3D G3DSA:1.10.287.950 401 605 2.7E-62 T 26-04-2016 PAM18_RS00890 6b6bca9762eb88e6baeb7b31a2bd3f96 679 Pfam PF13188 PAS domain 173 222 6.6E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS09900 89cf9b77263628890812dad2fca3b0b3 79 Gene3D G3DSA:3.40.30.10 4 78 8.2E-24 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS09900 89cf9b77263628890812dad2fca3b0b3 79 SUPERFAMILY SSF52833 5 77 6.22E-13 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS09900 89cf9b77263628890812dad2fca3b0b3 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 77 2.0E-16 T 26-04-2016 IPR008554 Glutaredoxin-like PAM18_RS09900 89cf9b77263628890812dad2fca3b0b3 79 PANTHER PTHR34386:SF2 1 79 1.6E-32 T 26-04-2016 PAM18_RS09900 89cf9b77263628890812dad2fca3b0b3 79 PANTHER PTHR34386 1 79 1.6E-32 T 26-04-2016 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 Pfam PF00083 Sugar (and other) transporter 56 453 4.6E-49 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 SUPERFAMILY SSF103473 10 452 1.31E-92 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 Gene3D G3DSA:1.20.1250.20 20 211 1.5E-37 T 26-04-2016 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 Gene3D G3DSA:1.20.1250.20 262 451 1.4E-23 T 26-04-2016 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 PANTHER PTHR24064 5 452 2.6E-131 T 26-04-2016 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 PANTHER PTHR24064:SF168 5 452 2.6E-131 T 26-04-2016 PAM18_RS07705 02c683631102fc17d3f92ce4eeb2877d 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 7.7E-27 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Gene3D G3DSA:1.10.540.10 3 124 2.8E-32 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 PANTHER PTHR10909:SF204 6 380 5.5E-283 T 26-04-2016 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 4.6E-24 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Gene3D G3DSA:2.40.110.10 126 219 5.0E-40 T 26-04-2016 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 SUPERFAMILY SSF47203 231 380 8.54E-48 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 SUPERFAMILY SSF56645 5 244 3.27E-74 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 2.7E-46 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 PANTHER PTHR10909 6 380 5.5E-283 T 26-04-2016 PAM18_RS18000 b401e99726aa53e3cf5c753016d67da0 382 Gene3D G3DSA:1.20.140.10 220 380 1.7E-61 T 26-04-2016 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:3.40.190.10 176 261 1.6E-13 T 26-04-2016 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.9E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF46785 1 82 9.62E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 PANTHER PTHR30346 1 292 8.8E-118 T 26-04-2016 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF53850 91 291 9.93E-34 T 26-04-2016 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 PANTHER PTHR30346:SF3 1 292 8.8E-118 T 26-04-2016 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:1.10.10.10 1 86 1.2E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02670 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:3.40.190.10 92 175 2.5E-19 T 26-04-2016 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 Pfam PF00793 DAHP synthetase I family 42 339 1.8E-93 T 26-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 PANTHER PTHR21225 1 350 1.3E-215 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 PIRSF PIRSF001361 1 355 5.9E-156 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 Gene3D G3DSA:3.20.20.70 11 352 6.2E-147 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 7.7E-149 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS16905 31af409f5efc7a6ba4b03dcf6e89ceb8 358 SUPERFAMILY SSF51569 8 349 2.56E-133 T 26-04-2016 PAM18_RS11380 76cc8bf61db0dd3e702d9bbf096a0609 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 17 109 7.9E-29 T 26-04-2016 IPR010279 Protein of unknown function DUF883, ElaB PAM18_RS11380 76cc8bf61db0dd3e702d9bbf096a0609 109 PANTHER PTHR35893:SF3 6 109 2.4E-42 T 26-04-2016 PAM18_RS11380 76cc8bf61db0dd3e702d9bbf096a0609 109 PANTHER PTHR35893 6 109 2.4E-42 T 26-04-2016 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 SUPERFAMILY SSF53738 556 657 9.81E-33 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 SUPERFAMILY SSF53738 660 763 6.67E-33 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 775 852 2.5E-13 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Gene3D G3DSA:3.40.120.10 410 542 4.9E-34 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 502 511 - T 26-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Gene3D G3DSA:3.30.310.50 772 858 4.5E-31 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 SUPERFAMILY SSF53738 412 552 5.49E-39 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Gene3D G3DSA:3.40.120.10 653 768 5.4E-44 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 413 542 1.2E-36 T 26-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 660 764 6.2E-21 T 26-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PANTHER PTHR22573 391 862 1.7E-225 T 26-04-2016 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 559 655 7.6E-28 T 26-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 SUPERFAMILY SSF55957 770 861 9.07E-26 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 Gene3D G3DSA:3.40.120.10 574 651 5.0E-36 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PANTHER PTHR22573:SF28 391 862 1.7E-225 T 26-04-2016 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 635 650 1.0E-24 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 606 619 1.0E-24 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 501 515 1.0E-24 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS27805 86edb0a6fc36d9c04c78fb263fbf832e 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 572 591 1.0E-24 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS17010 a3a614f2eea60981d11b3560bfa7ea0b 232 SUPERFAMILY SSF52317 3 193 3.48E-46 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS17010 a3a614f2eea60981d11b3560bfa7ea0b 232 PANTHER PTHR11922 21 206 6.6E-91 T 26-04-2016 PAM18_RS17010 a3a614f2eea60981d11b3560bfa7ea0b 232 Pfam PF00117 Glutamine amidotransferase class-I 22 178 2.8E-17 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS17010 a3a614f2eea60981d11b3560bfa7ea0b 232 Gene3D G3DSA:3.40.50.880 2 228 3.0E-59 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS17010 a3a614f2eea60981d11b3560bfa7ea0b 232 PANTHER PTHR11922:SF11 21 206 6.6E-91 T 26-04-2016 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 PANTHER PTHR11564 195 398 1.3E-75 T 26-04-2016 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 Gene3D G3DSA:1.20.120.140 170 221 6.2E-5 T 26-04-2016 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 SUPERFAMILY SSF52540 207 398 2.64E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 Pfam PF00448 SRP54-type protein, GTPase domain 211 399 4.7E-40 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 SMART SM00382 208 379 4.4E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 SMART SM00962 209 401 2.9E-46 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 PANTHER PTHR11564:SF3 195 398 1.3E-75 T 26-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 297 7.6E-77 T 26-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 PAM18_RS18820 4df37883dcd4102706ab5280748986d3 429 Gene3D G3DSA:3.40.50.300 222 399 1.2E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 Gene3D G3DSA:3.40.50.2000 1 158 4.3E-32 T 26-04-2016 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 PANTHER PTHR30160 1 351 1.0E-193 T 26-04-2016 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 PANTHER PTHR30160:SF8 1 351 1.0E-193 T 26-04-2016 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 314 3.3E-85 T 26-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 Gene3D G3DSA:3.40.50.2000 169 348 3.3E-51 T 26-04-2016 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 SUPERFAMILY SSF53756 1 348 2.51E-84 T 26-04-2016 PAM18_RS26220 bcd2f15890a9b4a673e3fc271e3390ff 355 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 296 8.3E-114 T 26-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF46689 1 78 2.51E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF53697 93 273 3.27E-39 T 26-04-2016 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01380 SIS domain 125 253 6.7E-22 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:1.10.10.10 1 78 1.9E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 PANTHER PTHR30514:SF7 1 272 7.7E-179 T 26-04-2016 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:3.40.50.10490 96 268 1.7E-36 T 26-04-2016 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 77 9.9E-31 T 26-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PAM18_RS09165 f99f4195d0a1b90054d55a1a97105cde 285 PANTHER PTHR30514 1 272 7.7E-179 T 26-04-2016 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 PANTHER PTHR10366 2 351 2.1E-168 T 26-04-2016 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 Gene3D G3DSA:3.90.25.10 192 347 1.7E-57 T 26-04-2016 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 PANTHER PTHR10366:SF41 2 351 2.1E-168 T 26-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 SUPERFAMILY SSF51735 1 335 1.39E-89 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 337 1.0E-150 T 26-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 Gene3D G3DSA:3.40.50.720 1 191 1.1E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26990 1e0eabe593e0b0da684fd86fc42f1d25 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.7E-100 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16395 fc743bfef1c5ac4093e98d3ab5082c29 120 Pfam PF04320 Protein with unknown function (DUF469) 15 116 7.8E-32 T 26-04-2016 IPR007416 Protein of unknown function DUF469 PAM18_RS16395 fc743bfef1c5ac4093e98d3ab5082c29 120 PANTHER PTHR38778:SF1 10 120 8.8E-51 T 26-04-2016 PAM18_RS16395 fc743bfef1c5ac4093e98d3ab5082c29 120 PANTHER PTHR38778 10 120 8.8E-51 T 26-04-2016 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 SMART SM00938 4 105 4.6E-66 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 26-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.7E-43 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PANTHER PTHR30115 1 112 6.5E-81 T 26-04-2016 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 26-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-43 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-43 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-43 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-43 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 Gene3D G3DSA:3.30.70.120 1 112 7.2E-50 T 26-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PANTHER PTHR30115:SF12 1 112 6.5E-81 T 26-04-2016 PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 SUPERFAMILY SSF54913 1 112 6.35E-45 T 26-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAM18_RS27635 83db47bc8df9010c24883e7f9c6e6061 112 PIRSF PIRSF039144 1 112 3.9E-55 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 SUPERFAMILY SSF51182 38 120 2.85E-10 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 SUPERFAMILY SSF46689 248 295 7.62E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 SMART SM00342 210 293 3.9E-17 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 Pfam PF02311 AraC-like ligand binding domain 32 149 5.5E-14 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 Gene3D G3DSA:1.10.10.60 248 296 3.3E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 Pfam PF12833 Helix-turn-helix domain 216 295 1.1E-16 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PANTHER PTHR11019:SF45 24 148 1.5E-82 T 26-04-2016 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PANTHER PTHR11019:SF45 168 301 1.5E-82 T 26-04-2016 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PANTHER PTHR11019 24 148 1.5E-82 T 26-04-2016 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 PANTHER PTHR11019 168 301 1.5E-82 T 26-04-2016 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 Gene3D G3DSA:2.60.120.280 43 177 2.0E-9 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS04170 9909c9b5c71de5a9afbdad11778059fb 303 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 7 295 1.7E-145 T 26-04-2016 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 PANTHER PTHR10277:SF28 1 556 2.7E-289 T 26-04-2016 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 PANTHER PTHR10277 1 556 2.7E-289 T 26-04-2016 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 Pfam PF00682 HMGL-like 33 313 1.8E-77 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 26-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 SMART SM00917 422 548 7.7E-31 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 Gene3D G3DSA:3.20.20.70 10 394 2.1E-147 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 548 1.3E-241 T 26-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 SUPERFAMILY SSF89000 388 437 1.26E-13 T 26-04-2016 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 8 549 54.326 T 26-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 SUPERFAMILY SSF110921 443 547 1.96E-33 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 26-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 SUPERFAMILY SSF51569 22 330 2.93E-98 T 26-04-2016 PAM18_RS05815 c80b11b48cfee6549aa55e115887d5d8 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 547 9.4E-29 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SUPERFAMILY SSF141868 446 681 7.32E-53 T 26-04-2016 IPR001633 EAL domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Gene3D G3DSA:3.30.450.20 132 249 2.3E-14 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 PANTHER PTHR10799 1 38 2.3E-55 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 PANTHER PTHR10799 341 539 2.3E-55 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Gene3D G3DSA:3.20.20.450 446 681 1.0E-54 T 26-04-2016 IPR001633 EAL domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SUPERFAMILY SSF55073 273 430 4.87E-24 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 251 2.6E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SMART SM00267 256 428 3.1E-22 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SMART SM00052 439 683 1.6E-38 T 26-04-2016 IPR001633 EAL domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 422 8.2E-19 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 424 1.2E-14 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SUPERFAMILY SSF55785 131 251 5.76E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 PANTHER PTHR10799:SF710 1 38 2.3E-55 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 PANTHER PTHR10799:SF710 341 539 2.3E-55 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Pfam PF00989 PAS fold 147 249 1.0E-6 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Gene3D G3DSA:3.40.50.2300 6 110 1.1E-6 T 26-04-2016 PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Pfam PF00563 EAL domain 446 677 4.6E-58 T 26-04-2016 IPR001633 EAL domain PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 SUPERFAMILY SSF52172 6 142 2.7E-9 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS25950 44ee76a31db3a79dcb8c3d47c61ce68a 691 Gene3D G3DSA:3.30.70.270 269 431 2.2E-29 T 26-04-2016 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 Pfam PF00210 Ferritin-like domain 39 176 3.3E-28 T 26-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 SUPERFAMILY SSF47240 31 175 5.02E-38 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 Gene3D G3DSA:1.20.1260.10 28 176 4.6E-51 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PIRSF PIRSF018063 12 177 6.7E-65 T 26-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PANTHER PTHR30295:SF1 16 177 9.0E-60 T 26-04-2016 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 163 177 2.1E-6 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 32 51 2.1E-6 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PRINTS PR00601 Bacterioferritin signature 73 93 2.1E-6 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS25545 2cb8171d4a0f53d8c587f09fb9f950e7 177 PANTHER PTHR30295 16 177 9.0E-60 T 26-04-2016 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 Gene3D G3DSA:1.10.10.10 1 85 4.6E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 SUPERFAMILY SSF46785 1 86 3.76E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 Gene3D G3DSA:3.40.190.10 175 264 2.6E-24 T 26-04-2016 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 Pfam PF03466 LysR substrate binding domain 87 290 2.4E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 PANTHER PTHR30419:SF8 1 290 2.8E-129 T 26-04-2016 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 Gene3D G3DSA:3.40.190.10 90 174 8.1E-14 T 26-04-2016 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.4E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 PANTHER PTHR30419 1 290 2.8E-129 T 26-04-2016 PAM18_RS07875 4d804b8f3289eee34275510bbabbe433 297 SUPERFAMILY SSF53850 90 290 9.78E-41 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:3.30.2090.10 719 804 2.0E-21 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PANTHER PTHR32063:SF13 1 1033 0.0 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:1.10.3850.10 811 1024 5.1E-55 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:1.10.3850.10 278 497 1.9E-59 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82693 273 329 1.36E-25 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82693 135 181 1.36E-25 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 3.1E-106 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:3.30.2090.10 180 273 1.0E-19 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82866 295 497 8.76E-50 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82866 803 1025 1.31E-44 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1032 0.0 T 26-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 PANTHER PTHR32063 1 1033 0.0 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82714 181 270 4.58E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:3.30.70.1430 38 138 7.4E-30 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82714 719 805 5.62E-20 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Gene3D G3DSA:3.30.70.1430 566 667 8.2E-26 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82693 38 130 3.14E-24 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 SUPERFAMILY SSF82693 564 667 6.02E-25 T 26-04-2016 PAM18_RS15515 ea2b2312273e01d9abae3b3ca0252876 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS24955 29e9aeb72580bab87f79aa6b82e9c86a 176 Pfam PF04355 SmpA / OmlA family 35 101 1.9E-25 T 26-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PAM18_RS24955 29e9aeb72580bab87f79aa6b82e9c86a 176 PANTHER PTHR37482:SF1 2 160 1.5E-58 T 26-04-2016 PAM18_RS24955 29e9aeb72580bab87f79aa6b82e9c86a 176 PANTHER PTHR37482 2 160 1.5E-58 T 26-04-2016 PAM18_RS24955 29e9aeb72580bab87f79aa6b82e9c86a 176 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 147 45.363 T 26-04-2016 IPR026592 Outer membrane protein assembly factor BamE PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 Gene3D G3DSA:3.40.50.1980 43 182 2.9E-11 T 26-04-2016 PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 SUPERFAMILY SSF53807 43 318 1.37E-45 T 26-04-2016 PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 PANTHER PTHR30535:SF7 5 318 2.2E-184 T 26-04-2016 PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 Pfam PF01497 Periplasmic binding protein 54 295 5.5E-26 T 26-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 Gene3D G3DSA:3.40.50.1980 185 318 2.9E-31 T 26-04-2016 PAM18_RS10515 13659a3f9817a22029fcf13903af9d61 323 PANTHER PTHR30535 5 318 2.2E-184 T 26-04-2016 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 211 4.9E-38 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 Pfam PF12833 Helix-turn-helix domain 261 337 2.0E-15 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 Gene3D G3DSA:1.10.10.60 289 337 6.5E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 SUPERFAMILY SSF46689 289 338 7.17E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 PANTHER PTHR11019:SF52 204 343 2.4E-31 T 26-04-2016 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 PANTHER PTHR11019 204 343 2.4E-31 T 26-04-2016 PAM18_RS01530 51df629e964f20990c9882703a204b0b 350 SMART SM00342 254 335 1.4E-11 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 Gene3D G3DSA:3.50.50.60 29 128 2.6E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 Gene3D G3DSA:3.50.50.60 182 261 2.6E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 Gene3D G3DSA:3.50.50.60 354 400 2.6E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 PANTHER PTHR13847 1 435 9.4E-174 T 26-04-2016 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 PANTHER PTHR13847:SF196 1 435 9.4E-174 T 26-04-2016 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 SUPERFAMILY SSF51905 354 431 4.1E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 SUPERFAMILY SSF51905 38 262 4.1E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27740 5f12e4b6573d8063f50dca0670af01fa 439 Pfam PF01266 FAD dependent oxidoreductase 39 392 6.8E-56 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS28875 2bfbb81552d9b39d4380dda3294a4d9f 284 Pfam PF04280 Tim44-like domain 160 282 3.6E-8 T 26-04-2016 IPR007379 Tim44-like domain PAM18_RS28875 2bfbb81552d9b39d4380dda3294a4d9f 284 PANTHER PTHR41542:SF1 1 284 1.6E-104 T 26-04-2016 PAM18_RS28875 2bfbb81552d9b39d4380dda3294a4d9f 284 SUPERFAMILY SSF54427 154 282 1.31E-5 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS28875 2bfbb81552d9b39d4380dda3294a4d9f 284 SMART SM00978 152 283 2.8E-20 T 26-04-2016 IPR007379 Tim44-like domain PAM18_RS28875 2bfbb81552d9b39d4380dda3294a4d9f 284 PANTHER PTHR41542 1 284 1.6E-104 T 26-04-2016 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 Gene3D G3DSA:3.20.20.60 8 254 2.8E-60 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 SUPERFAMILY SSF51621 8 283 8.07E-67 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 PANTHER PTHR21631 10 287 5.0E-194 T 26-04-2016 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 Hamap MF_01299 Oxaloacetate decarboxylase. 4 287 48.662 T 26-04-2016 IPR023687 Oxaloacetate decarboxylase, bacterial GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 247 1.2E-43 T 26-04-2016 PAM18_RS25505 a9d99ab3c6ad39b0857a3677c9a1ecad 287 PANTHER PTHR21631:SF19 10 287 5.0E-194 T 26-04-2016 PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 PANTHER PTHR12418:SF25 52 177 3.3E-71 T 26-04-2016 PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 Pfam PF03061 Thioesterase superfamily 88 165 1.3E-16 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 SUPERFAMILY SSF54637 8 173 1.35E-36 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 Gene3D G3DSA:3.10.129.10 39 177 9.7E-45 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 PANTHER PTHR12418 52 177 3.3E-71 T 26-04-2016 PAM18_RS25295 2441898717ffd1331b1821741b40113a 179 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 78 173 1.4E-23 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS18835 51a501d996edc9e68af912083610df9c 418 PANTHER PTHR30373 1 291 1.0E-140 T 26-04-2016 PAM18_RS18835 51a501d996edc9e68af912083610df9c 418 PANTHER PTHR30373 352 418 1.0E-140 T 26-04-2016 PAM18_RS18835 51a501d996edc9e68af912083610df9c 418 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 45 168 5.7E-38 T 26-04-2016 IPR007621 TPM domain PAM18_RS18835 51a501d996edc9e68af912083610df9c 418 PANTHER PTHR30373:SF2 1 291 1.0E-140 T 26-04-2016 PAM18_RS18835 51a501d996edc9e68af912083610df9c 418 PANTHER PTHR30373:SF2 352 418 1.0E-140 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 107 165 5.75E-6 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:2.40.50.100 199 231 5.7E-14 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 Gene3D G3DSA:2.40.50.100 40 72 5.7E-14 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 174 253 7.32E-10 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 PANTHER PTHR30438 10 319 1.4E-63 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 PANTHER PTHR30438:SF1 10 319 1.4E-63 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 SUPERFAMILY SSF111369 40 94 4.97E-6 T 26-04-2016 PAM18_RS08040 d7f3b528b33864e17936b3c9ad88d206 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 286 1.4E-18 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 8.6E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 8.6E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 8.6E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 8.6E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 SMART SM01130 2 290 1.9E-90 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 SUPERFAMILY SSF51569 2 289 7.64E-84 T 26-04-2016 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PANTHER PTHR12128:SF34 1 289 1.8E-96 T 26-04-2016 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PIRSF PIRSF001365 1 299 1.5E-80 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 PANTHER PTHR12128 1 289 1.8E-96 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.2E-55 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS03830 f6ab9b5e47933d5310cefca35af980e5 303 Gene3D G3DSA:3.20.20.70 2 289 9.9E-89 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 2.0E-37 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 Gene3D G3DSA:3.50.50.60 356 403 1.4E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 Gene3D G3DSA:3.50.50.60 28 126 1.4E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 Gene3D G3DSA:3.50.50.60 179 257 1.4E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 SUPERFAMILY SSF51905 366 401 2.89E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 SUPERFAMILY SSF51905 37 258 2.89E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 PANTHER PTHR13847 1 422 2.7E-137 T 26-04-2016 PAM18_RS03840 83d81180d1efe52429327154f99fe2a8 439 PANTHER PTHR13847:SF196 1 422 2.7E-137 T 26-04-2016 PAM18_RS17395 5543d5e228d7c4ca33bb947908cf6f50 158 SUPERFAMILY SSF46785 6 143 1.08E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17395 5543d5e228d7c4ca33bb947908cf6f50 158 Pfam PF12802 MarR family 37 94 2.0E-10 T 26-04-2016 PAM18_RS17395 5543d5e228d7c4ca33bb947908cf6f50 158 SMART SM00347 31 131 9.0E-12 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17395 5543d5e228d7c4ca33bb947908cf6f50 158 Gene3D G3DSA:1.10.10.10 10 143 2.6E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 1.6E-37 T 26-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 455 5.1E-177 T 26-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 SUPERFAMILY SSF52540 293 446 7.67E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 SUPERFAMILY SSF52540 196 266 7.67E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 Pfam PF03796 DnaB-like helicase C terminal domain 197 453 2.8E-117 T 26-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 Gene3D G3DSA:3.40.50.300 182 455 1.3E-108 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 PANTHER PTHR30153 4 463 1.8E-220 T 26-04-2016 PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 SUPERFAMILY SSF48024 18 129 1.31E-40 T 26-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PAM18_RS25800 6a3a1fe11e64a7183fdcff270132770f 464 Gene3D G3DSA:1.10.860.10 20 122 7.2E-41 T 26-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 Gene3D G3DSA:1.10.10.10 6 137 1.1E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 SUPERFAMILY SSF46785 7 138 3.71E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 SMART SM00347 23 123 1.2E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 26-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PAM18_RS20910 9bc5c5a0ecca7903f6c3658a63d3c5dd 186 Pfam PF12802 MarR family 30 89 2.7E-9 T 26-04-2016 PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 458 594 7.7E-39 T 26-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Pfam PF00571 CBS domain 156 199 0.0066 T 26-04-2016 IPR000644 CBS domain PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Pfam PF00571 CBS domain 222 263 0.0021 T 26-04-2016 IPR000644 CBS domain PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 SUPERFAMILY SSF51206 9 135 9.95E-20 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Pfam PF03445 Putative nucleotidyltransferase DUF294 290 420 7.0E-42 T 26-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 SUPERFAMILY SSF54631 153 264 1.09E-14 T 26-04-2016 PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 4.5E-9 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 SMART SM00100 11 127 2.8E-5 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Gene3D G3DSA:3.10.580.10 155 265 2.7E-12 T 26-04-2016 PAM18_RS08915 bda39ae24f77e924e6827ef21a6fe5c5 599 Gene3D G3DSA:2.60.120.10 9 135 1.5E-14 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS06355 43a8a3ac84058f13a7a4cc6967c62a42 134 Pfam PF14346 Domain of unknown function (DUF4398) 28 125 6.0E-30 T 26-04-2016 IPR025511 Domain of unknown function DUF4398 PAM18_RS09415 5116dea1729aedca1c877166ec120c83 145 PANTHER PTHR31793 7 135 2.3E-81 T 26-04-2016 PAM18_RS09415 5116dea1729aedca1c877166ec120c83 145 Pfam PF13279 Thioesterase-like superfamily 15 134 3.8E-12 T 26-04-2016 PAM18_RS09415 5116dea1729aedca1c877166ec120c83 145 SUPERFAMILY SSF54637 3 139 2.8E-39 T 26-04-2016 IPR029069 HotDog domain PAM18_RS09415 5116dea1729aedca1c877166ec120c83 145 PANTHER PTHR31793:SF6 7 135 2.3E-81 T 26-04-2016 PAM18_RS09415 5116dea1729aedca1c877166ec120c83 145 Gene3D G3DSA:3.10.129.10 3 139 8.7E-34 T 26-04-2016 IPR029069 HotDog domain PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 Pfam PF03466 LysR substrate binding domain 87 284 2.2E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 SUPERFAMILY SSF46785 1 84 9.54E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 Gene3D G3DSA:3.40.190.10 102 173 3.2E-13 T 26-04-2016 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 284 3.6E-122 T 26-04-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 Gene3D G3DSA:3.40.190.10 174 259 1.6E-25 T 26-04-2016 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 SUPERFAMILY SSF53850 87 284 9.15E-33 T 26-04-2016 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 PANTHER PTHR30126 1 283 8.2E-188 T 26-04-2016 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 Gene3D G3DSA:1.10.10.10 1 80 6.5E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 PANTHER PTHR30126:SF17 1 283 8.2E-188 T 26-04-2016 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18400 303808c7075252c6082e1bc8fd3de523 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.0E-23 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28870 3cdb7f519f46d2de945a2382f6694058 133 SUPERFAMILY SSF160631 2 132 2.49E-42 T 26-04-2016 PAM18_RS28870 3cdb7f519f46d2de945a2382f6694058 133 Pfam PF14567 SMI1-KNR4 cell-wall 2 131 2.3E-43 T 26-04-2016 PAM18_RS28870 3cdb7f519f46d2de945a2382f6694058 133 Gene3D G3DSA:3.40.1580.10 2 133 5.6E-63 T 26-04-2016 IPR018958 SMI1/KNR4-like domain PAM18_RS28870 3cdb7f519f46d2de945a2382f6694058 133 SMART SM00860 21 128 0.0026 T 26-04-2016 IPR018958 SMI1/KNR4-like domain PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 1.1E-61 T 26-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 SUPERFAMILY SSF51621 3 254 2.83E-83 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 PANTHER PTHR30502 5 265 8.4E-115 T 26-04-2016 PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 PANTHER PTHR30502:SF5 5 265 8.4E-115 T 26-04-2016 PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 Gene3D G3DSA:3.20.20.60 4 252 1.3E-79 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS04130 321e1b6d04d3e3a411f0159022cdd8bb 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.3E-128 T 26-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 Pfam PF12849 PBP superfamily domain 101 310 1.9E-25 T 26-04-2016 IPR024370 PBP domain PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 Gene3D G3DSA:3.30.1330.60 346 460 2.0E-20 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 PANTHER PTHR30570:SF1 1 70 3.5E-84 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 PANTHER PTHR30570:SF1 95 372 3.5E-84 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 PANTHER PTHR30570 1 70 3.5E-84 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 PANTHER PTHR30570 95 372 3.5E-84 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 SUPERFAMILY SSF103088 337 460 3.27E-20 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 Pfam PF00691 OmpA family 360 454 4.9E-9 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 Gene3D G3DSA:3.40.190.10 156 288 4.2E-32 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 SUPERFAMILY SSF53850 48 68 1.09E-59 T 26-04-2016 PAM18_RS12840 6189f89cca2b0c83e4d67f16a2b71bc3 461 SUPERFAMILY SSF53850 99 371 1.09E-59 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 Gene3D G3DSA:2.170.130.10 28 176 1.3E-26 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 730 2.0E-71 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 SUPERFAMILY SSF56935 30 730 9.77E-122 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 Gene3D G3DSA:2.40.170.20 184 730 7.9E-124 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 Pfam PF00593 TonB dependent receptor 489 728 4.1E-28 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 PANTHER PTHR32552 60 730 3.5E-210 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 PANTHER PTHR32552 1 40 3.5E-210 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 PANTHER PTHR32552:SF10 60 730 3.5E-210 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 PANTHER PTHR32552:SF10 1 40 3.5E-210 T 26-04-2016 PAM18_RS02195 375143eb6b1da49f831e09a780a0e56d 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 167 4.6E-19 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PIRSF PIRSF006356 1 416 4.1E-148 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 TIGRFAM TIGR01078 arcA: arginine deiminase 10 416 9.4E-178 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737:SF13 157 299 2.7E-137 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737:SF13 2 95 2.7E-137 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737:SF13 322 418 2.7E-137 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 352 369 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 395 413 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 157 175 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 372 386 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PRINTS PR01466 Bacterial arginine deiminase signature 185 200 4.2E-52 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737 157 299 2.7E-137 T 26-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737 2 95 2.7E-137 T 26-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 PANTHER PTHR12737 322 418 2.7E-137 T 26-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 SUPERFAMILY SSF55909 7 416 6.04E-143 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 Gene3D G3DSA:3.75.10.10 4 71 2.2E-133 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 Gene3D G3DSA:3.75.10.10 157 417 2.2E-133 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 Pfam PF02274 Amidinotransferase 22 413 8.4E-103 T 26-04-2016 PAM18_RS27040 77b737d3430850bca3b45bc62b2f329e 418 Hamap MF_00242 Arginine deiminase [arcA]. 5 416 49.567 T 26-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 PANTHER PTHR11358 1 310 5.3E-114 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 26-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 Pfam PF00491 Arginase family 36 307 1.1E-86 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 Gene3D G3DSA:3.40.800.10 8 313 1.7E-109 T 26-04-2016 IPR023696 Ureohydrolase domain PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 TIGRFAM TIGR01230 agmatinase: agmatinase 39 308 3.2E-54 T 26-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 PIRSF PIRSF036979 14 314 1.1E-91 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 PANTHER PTHR11358:SF27 1 310 5.3E-114 T 26-04-2016 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 SUPERFAMILY SSF52768 15 311 4.32E-95 T 26-04-2016 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 PRINTS PR00116 Arginase signature 235 264 5.9E-11 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS01440 1a7f4cef68e8ae96bbce38e82797c3e5 318 PRINTS PR00116 Arginase signature 122 137 5.9E-11 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 PANTHER PTHR11552:SF139 233 586 7.6E-225 T 26-04-2016 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 PANTHER PTHR11552:SF139 5 217 7.6E-225 T 26-04-2016 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Pfam PF00732 GMC oxidoreductase 199 344 7.9E-9 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 SUPERFAMILY SSF51905 521 582 1.62E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 SUPERFAMILY SSF51905 7 341 1.62E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 PANTHER PTHR11552 233 586 7.6E-225 T 26-04-2016 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 PANTHER PTHR11552 5 217 7.6E-225 T 26-04-2016 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 SUPERFAMILY SSF54373 418 494 2.12E-10 T 26-04-2016 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Gene3D G3DSA:3.50.50.60 512 580 4.2E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Gene3D G3DSA:3.50.50.60 8 158 4.2E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Gene3D G3DSA:3.50.50.60 243 349 4.2E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Gene3D G3DSA:3.50.50.60 454 467 4.2E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14260 a491aff63d650588546485a7fef5bf24 591 Pfam PF05199 GMC oxidoreductase 445 571 5.4E-26 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS19570 0de0460f16c07376e88de9af2c2f51e4 185 Pfam PF03358 NADPH-dependent FMN reductase 6 150 1.4E-39 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PAM18_RS19570 0de0460f16c07376e88de9af2c2f51e4 185 SUPERFAMILY SSF52218 6 176 1.04E-52 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS19570 0de0460f16c07376e88de9af2c2f51e4 185 Gene3D G3DSA:3.40.50.360 2 184 5.4E-59 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS19570 0de0460f16c07376e88de9af2c2f51e4 185 PANTHER PTHR30543:SF6 1 185 8.6E-75 T 26-04-2016 PAM18_RS19570 0de0460f16c07376e88de9af2c2f51e4 185 PANTHER PTHR30543 1 185 8.6E-75 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:2.40.50.140 332 403 2.1E-34 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SMART SM00292 713 790 6.3E-9 T 26-04-2016 IPR001357 BRCT domain PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SUPERFAMILY SSF47781 618 704 7.41E-14 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF12826 Helix-hairpin-helix motif 534 597 3.0E-21 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF12826 Helix-hairpin-helix motif 631 687 1.2E-8 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Hamap MF_01588 DNA ligase [ligA]. 5 787 53.011 T 26-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:1.10.287.610 3 70 1.3E-30 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SUPERFAMILY SSF50249 330 412 3.26E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SUPERFAMILY SSF52113 714 788 5.23E-17 T 26-04-2016 IPR001357 BRCT domain PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 26-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 410 3.8E-35 T 26-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 458 1.3E-13 T 26-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SUPERFAMILY SSF47781 416 603 1.37E-52 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 128 157 - T 26-04-2016 IPR018239 NAD-dependent DNA ligase, active site PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:1.10.150.20 459 527 3.7E-28 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 PANTHER PTHR23389 1 557 5.4E-205 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:3.30.470.30 132 264 9.9E-51 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SUPERFAMILY SSF56091 3 328 2.16E-118 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 330 5.2E-125 T 26-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 617 1.4E-221 T 26-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:3.40.50.10190 714 789 1.7E-22 T 26-04-2016 IPR001357 BRCT domain PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 713 786 1.3E-11 T 26-04-2016 IPR001357 BRCT domain PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 SMART SM00532 6 472 8.1E-257 T 26-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:1.10.150.20 624 706 1.2E-18 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 Gene3D G3DSA:1.10.150.20 528 610 1.8E-26 T 26-04-2016 PAM18_RS18030 ec32518ec0293f15529e6e9819f9de03 794 PANTHER PTHR23389:SF9 1 557 5.4E-205 T 26-04-2016 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 361 473 4.0E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Gene3D G3DSA:3.30.565.10 314 476 4.4E-45 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Pfam PF08448 PAS fold 119 229 6.4E-9 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SMART SM00448 498 614 8.4E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SUPERFAMILY SSF55874 303 471 4.85E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PANTHER PTHR24423 81 615 1.5E-189 T 26-04-2016 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SMART SM00388 247 313 3.6E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Gene3D G3DSA:1.10.287.130 239 309 9.2E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SMART SM00073 636 736 2.1E-5 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Pfam PF00072 Response regulator receiver domain 500 614 5.9E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Gene3D G3DSA:3.40.50.2300 495 621 1.3E-31 T 26-04-2016 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SUPERFAMILY SSF55785 99 225 3.49E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Gene3D G3DSA:1.20.120.160 629 733 2.2E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SUPERFAMILY SSF47226 625 736 6.77E-19 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Pfam PF01627 Hpt domain 647 730 2.5E-13 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SUPERFAMILY SSF47384 230 314 1.12E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PANTHER PTHR24423:SF382 81 615 1.5E-189 T 26-04-2016 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Gene3D G3DSA:3.30.450.20 101 225 7.9E-9 T 26-04-2016 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SUPERFAMILY SSF52172 497 658 5.91E-32 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.0E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 1.0E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 1.0E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.0E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 SMART SM00387 360 475 2.1E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09845 68a476ef8aa7d3068d562d7703738314 741 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 313 5.4E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF52540 11 210 1.99E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.30.1220.10 232 331 8.1E-32 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 191 4.3E-52 T 26-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 SMART SM00833 237 331 7.4E-16 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF90002 237 329 1.57E-25 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 330 1.2E-20 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.40.50.300 11 211 6.3E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 PANTHER PTHR13748 3 331 1.1E-140 T 26-04-2016 PAM18_RS24010 9f24c46a0f44d243223721a91179c484 334 PANTHER PTHR13748:SF43 3 331 1.1E-140 T 26-04-2016 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 SUPERFAMILY SSF52317 4 188 4.16E-53 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 PANTHER PTHR11019 4 94 6.4E-57 T 26-04-2016 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 PANTHER PTHR11019 112 145 6.4E-57 T 26-04-2016 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 5.8E-56 T 26-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 PANTHER PTHR11019:SF112 4 94 6.4E-57 T 26-04-2016 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 PANTHER PTHR11019:SF112 112 145 6.4E-57 T 26-04-2016 PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 Pfam PF01965 DJ-1/PfpI family 4 185 1.8E-50 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS22620 451b733d2ddde714f5839c50e4d40321 193 Gene3D G3DSA:3.40.50.880 3 188 1.5E-60 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF54631 167 305 6.6E-29 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:3.10.580.10 158 290 1.8E-17 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF01769 Divalent cation transporter 351 475 1.0E-25 T 26-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 PANTHER PTHR11911:SF99 1 460 1.2E-41 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF03448 MgtE intracellular N domain 64 165 7.4E-26 T 26-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 167 223 5.1E-4 T 26-04-2016 IPR000644 CBS domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 233 285 8.6E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 481 3.5E-85 T 26-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.10.357.20 307 481 4.1E-56 T 26-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.25.60.10 40 157 1.8E-25 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF161093 308 481 5.49E-48 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 PANTHER PTHR11911 1 460 1.2E-41 T 26-04-2016 PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 238 286 6.4E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 174 227 2.7 T 26-04-2016 IPR000644 CBS domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00924 64 167 1.3E-35 T 26-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain PAM18_RS21065 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF158791 41 164 2.22E-28 T 26-04-2016 PAM18_RS26485 92c54e40eb2f778552a314f33bd899dc 208 PANTHER PTHR38693:SF1 1 208 3.4E-76 T 26-04-2016 PAM18_RS26485 92c54e40eb2f778552a314f33bd899dc 208 PANTHER PTHR38693 1 208 3.4E-76 T 26-04-2016 PAM18_RS26485 92c54e40eb2f778552a314f33bd899dc 208 Pfam PF02036 SCP-2 sterol transfer family 17 114 2.6E-13 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS26485 92c54e40eb2f778552a314f33bd899dc 208 SUPERFAMILY SSF55718 29 122 2.16E-5 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 PANTHER PTHR24220 4 266 5.9E-96 T 26-04-2016 PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 PANTHER PTHR24220:SF408 4 266 5.9E-96 T 26-04-2016 PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 Pfam PF00005 ABC transporter 19 174 2.0E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 SUPERFAMILY SSF52540 4 234 5.53E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 SMART SM00382 28 224 3.4E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08480 0a830746150898b111fa137b9596b31b 267 Gene3D G3DSA:3.40.50.300 3 234 2.0E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03435 b8e51c0942d9744f3541a24c81218d3c 99 Gene3D G3DSA:3.30.70.330 5 96 2.4E-32 T 26-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 PAM18_RS03435 b8e51c0942d9744f3541a24c81218d3c 99 SUPERFAMILY SSF54189 1 91 1.62E-29 T 26-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03435 b8e51c0942d9744f3541a24c81218d3c 99 PANTHER PTHR11620 7 96 2.1E-29 T 26-04-2016 PAM18_RS03435 b8e51c0942d9744f3541a24c81218d3c 99 Pfam PF00276 Ribosomal protein L23 8 94 4.8E-31 T 26-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03435 b8e51c0942d9744f3541a24c81218d3c 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.008 T 26-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 Gene3D G3DSA:3.30.70.940 3 112 9.6E-44 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 SUPERFAMILY SSF82679 3 113 6.54E-39 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 8.4E-20 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 8.4E-20 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 8.4E-20 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 Gene3D G3DSA:2.30.30.30 116 177 4.5E-31 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 SMART SM00739 123 150 1.4E-7 T 26-04-2016 IPR005824 KOW PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 SUPERFAMILY SSF50104 121 177 1.16E-19 T 26-04-2016 IPR008991 Translation protein SH3-like domain PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.831 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 PANTHER PTHR30265 1 177 1.0E-83 T 26-04-2016 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.4E-28 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 26-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 1.3E-66 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 Pfam PF00467 KOW motif 126 156 3.5E-9 T 26-04-2016 IPR005824 KOW PAM18_RS03365 f76fd1bd210e72ef0403b96843785b58 177 SMART SM00738 2 111 6.3E-48 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 SUPERFAMILY SSF46767 275 356 1.19E-30 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Gene3D G3DSA:3.40.10.10 10 92 1.3E-30 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 SUPERFAMILY SSF57884 10 97 6.67E-29 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 SUPERFAMILY SSF53155 196 274 1.37E-21 T 26-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Pfam PF12833 Helix-turn-helix domain 111 189 5.4E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 SMART SM00342 105 188 7.7E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 PANTHER PTHR10815:SF9 164 355 8.2E-127 T 26-04-2016 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 PANTHER PTHR10815 164 355 8.2E-127 T 26-04-2016 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 276 355 4.6E-34 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Gene3D G3DSA:1.10.10.10 275 356 1.1E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 PIRSF PIRSF000409 2 358 1.9E-142 T 26-04-2016 IPR016221 Bifunctional regulatory protein Ada PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Gene3D G3DSA:3.30.160.70 187 274 3.5E-34 T 26-04-2016 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Gene3D G3DSA:1.10.10.60 144 186 4.3E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 326 332 - T 26-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Gene3D G3DSA:1.10.10.60 93 143 7.0E-23 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 SUPERFAMILY SSF46689 90 137 9.86E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Pfam PF02805 Metal binding domain of Ada 16 77 9.4E-30 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS15010 4691a790b72bf74a75c6405be0dcb0f6 358 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 277 356 1.3E-32 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS12040 3bdad92dc65e294eb2ae020afe5975df 141 Gene3D G3DSA:3.40.630.30 12 138 9.7E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12040 3bdad92dc65e294eb2ae020afe5975df 141 SUPERFAMILY SSF55729 3 140 3.43E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12040 3bdad92dc65e294eb2ae020afe5975df 141 Pfam PF13673 Acetyltransferase (GNAT) domain 24 138 3.2E-23 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS12040 3bdad92dc65e294eb2ae020afe5975df 141 PANTHER PTHR13355:SF8 20 138 2.4E-30 T 26-04-2016 PAM18_RS12040 3bdad92dc65e294eb2ae020afe5975df 141 PANTHER PTHR13355 20 138 2.4E-30 T 26-04-2016 PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 193 4.0E-44 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 Gene3D G3DSA:3.40.50.10420 10 198 1.5E-53 T 26-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 PANTHER PTHR23407:SF1 1 198 8.2E-57 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 SUPERFAMILY SSF100950 8 200 4.33E-52 T 26-04-2016 PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 193 6.5E-39 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 PIRSF PIRSF006806 7 196 4.3E-33 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase PAM18_RS27330 d3fbbfac9491b9a37f1ed4bc723e329d 203 PANTHER PTHR23407 1 198 8.2E-57 T 26-04-2016 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 PANTHER PTHR30203:SF1 1 420 9.8E-115 T 26-04-2016 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 PANTHER PTHR30203 1 420 9.8E-115 T 26-04-2016 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 Gene3D G3DSA:1.20.1600.10 39 420 3.8E-60 T 26-04-2016 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 SUPERFAMILY SSF56954 11 422 6.67E-80 T 26-04-2016 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 Pfam PF02321 Outer membrane efflux protein 246 420 4.5E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS12975 5ef9c55e70a549f22ea55bcc2139bc33 428 Pfam PF02321 Outer membrane efflux protein 43 213 3.9E-26 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 Pfam PF01432 Peptidase family M3 224 675 1.6E-150 T 26-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 SUPERFAMILY SSF55486 4 675 2.2E-208 T 26-04-2016 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.20.1050.40 10 140 1.0E-26 T 26-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 PANTHER PTHR11804:SF8 2 677 0.0 T 26-04-2016 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:3.40.390.10 359 504 2.7E-59 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 PANTHER PTHR11804 2 677 0.0 T 26-04-2016 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.10 505 676 1.7E-140 T 26-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PAM18_RS00345 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.10 142 350 1.7E-140 T 26-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 Gene3D G3DSA:3.10.310.10 124 248 2.2E-47 T 26-04-2016 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 PANTHER PTHR13774 1 261 8.4E-110 T 26-04-2016 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 Gene3D G3DSA:3.10.310.10 1 123 8.9E-45 T 26-04-2016 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 PIRSF PIRSF016184 1 260 1.2E-61 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 SUPERFAMILY SSF54506 1 260 9.89E-86 T 26-04-2016 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 3.2E-62 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 PANTHER PTHR13774:SF17 1 261 8.4E-110 T 26-04-2016 PAM18_RS07240 3a20e96a36123d016c5c147ffe405e84 261 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 259 8.0E-42 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PANTHER PTHR24322 8 131 2.9E-50 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PANTHER PTHR24322 147 183 2.9E-50 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 SUPERFAMILY SSF51735 5 250 6.86E-72 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 3.0E-4 T 26-04-2016 PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 249 6.0E-59 T 26-04-2016 PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 Gene3D G3DSA:3.40.50.720 3 250 5.5E-76 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.3E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PANTHER PTHR24322:SF485 8 131 2.9E-50 T 26-04-2016 PAM18_RS28840 8eed48be68580a7c938f442e7c783aa1 252 PANTHER PTHR24322:SF485 147 183 2.9E-50 T 26-04-2016 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 44 468 2.0E-73 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 PANTHER PTHR30203 24 470 5.2E-242 T 26-04-2016 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 PANTHER PTHR30203:SF5 24 470 5.2E-242 T 26-04-2016 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 Pfam PF02321 Outer membrane efflux protein 288 466 7.9E-15 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 Pfam PF02321 Outer membrane efflux protein 63 256 4.2E-22 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 Gene3D G3DSA:1.20.1600.10 51 472 1.9E-85 T 26-04-2016 PAM18_RS19400 ea5b40e87e84ff4f7262205302e795b9 482 SUPERFAMILY SSF56954 6 471 3.27E-81 T 26-04-2016 PAM18_RS27115 7d84e8b5b364462aa9fe2bf36356868f 147 Pfam PF03061 Thioesterase superfamily 28 111 3.3E-13 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS27115 7d84e8b5b364462aa9fe2bf36356868f 147 SUPERFAMILY SSF54637 9 142 2.49E-37 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27115 7d84e8b5b364462aa9fe2bf36356868f 147 PANTHER PTHR31793:SF7 1 145 2.7E-74 T 26-04-2016 PAM18_RS27115 7d84e8b5b364462aa9fe2bf36356868f 147 PANTHER PTHR31793 1 145 2.7E-74 T 26-04-2016 PAM18_RS27115 7d84e8b5b364462aa9fe2bf36356868f 147 Gene3D G3DSA:3.10.129.10 7 143 1.9E-51 T 26-04-2016 IPR029069 HotDog domain PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 18 661 47.399 T 26-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 PANTHER PTHR10357:SF137 1 145 0.0 T 26-04-2016 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 PANTHER PTHR10357:SF137 183 664 0.0 T 26-04-2016 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 Pfam PF11896 Domain of unknown function (DUF3416) 21 203 2.0E-46 T 26-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 Pfam PF00128 Alpha amylase, catalytic domain 227 332 6.3E-6 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 PANTHER PTHR10357 1 145 0.0 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 PANTHER PTHR10357 183 664 0.0 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 SMART SM00642 213 651 7.7E-5 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 SUPERFAMILY SSF51445 199 565 6.09E-89 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14825 a331aa8c9ebb13041756becede7ac7a0 664 Gene3D G3DSA:3.20.20.80 203 563 7.8E-72 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS27615 7169188148e7cab8cec4aa3f7d2f9ffe 304 Pfam PF00419 Fimbrial protein 159 304 4.5E-13 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS27615 7169188148e7cab8cec4aa3f7d2f9ffe 304 SUPERFAMILY SSF49401 168 304 7.95E-20 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS27615 7169188148e7cab8cec4aa3f7d2f9ffe 304 PANTHER PTHR33420 1 304 4.0E-192 T 26-04-2016 PAM18_RS27615 7169188148e7cab8cec4aa3f7d2f9ffe 304 PANTHER PTHR33420:SF10 1 304 4.0E-192 T 26-04-2016 PAM18_RS27615 7169188148e7cab8cec4aa3f7d2f9ffe 304 Gene3D G3DSA:2.60.40.1090 157 304 1.9E-20 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 PANTHER PTHR11102:SF11 43 149 2.4E-17 T 26-04-2016 PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 PANTHER PTHR11102 43 149 2.4E-17 T 26-04-2016 PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 SUPERFAMILY SSF81901 34 135 4.84E-22 T 26-04-2016 PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 61 96 6.5E-9 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 97 128 5.5E-4 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 Gene3D G3DSA:1.25.40.10 36 137 3.6E-27 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 61 96 3.5E-9 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS04885 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 97 132 1.0E-6 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 1.6E-13 T 26-04-2016 IPR012312 Haemerythrin-like PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 26-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 Hamap MF_00556 Bacteriohemerythrin. 3 125 24.869 T 26-04-2016 IPR023504 Bacteriohemerythrin-like protein PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 PANTHER PTHR37164 2 142 2.7E-47 T 26-04-2016 PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 Gene3D G3DSA:1.20.120.50 1 125 9.8E-35 T 26-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 125 1.4E-35 T 26-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 PAM18_RS17295 57cf38bdc8fb2666c21e763184a3f6c0 153 SUPERFAMILY SSF47188 1 125 3.01E-32 T 26-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 535 2.1E-234 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 PANTHER PTHR11692 8 535 0.0 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.140.20 383 525 3.9E-61 T 26-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.50.1380 9 191 1.2E-81 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 SMART SM00798 140 467 1.8E-206 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 SUPERFAMILY SSF52335 10 197 4.45E-70 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 PIRSF PIRSF000414 4 535 2.9E-216 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 SUPERFAMILY SSF53927 222 535 1.0E-127 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 PANTHER PTHR11692:SF2 8 535 0.0 T 26-04-2016 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 535 44.702 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 466 3.4E-115 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Pfam PF02142 MGS-like domain 22 135 1.8E-27 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 SMART SM00851 22 135 2.6E-59 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS25415 ef9211fc87502928495868c503f3b871 535 Gene3D G3DSA:3.40.140.20 254 377 3.5E-45 T 26-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 Pfam PF00183 Hsp90 protein 277 354 1.4E-8 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 145 2.1E-8 T 26-04-2016 PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PRINTS PR00775 90kDa heat shock protein signature 186 204 2.0E-13 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PRINTS PR00775 90kDa heat shock protein signature 33 55 2.0E-13 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PRINTS PR00775 90kDa heat shock protein signature 168 185 2.0E-13 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PRINTS PR00775 90kDa heat shock protein signature 117 139 2.0E-13 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 SUPERFAMILY SSF54211 233 456 1.06E-28 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 SUPERFAMILY SSF55874 13 209 9.87E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 Gene3D G3DSA:3.30.565.10 18 221 1.5E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PIRSF PIRSF002583 2 609 2.7E-96 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PANTHER PTHR11528:SF26 12 537 4.8E-109 T 26-04-2016 PAM18_RS20305 5edb41a67beb62b34aa63c3673576c66 613 PANTHER PTHR11528 12 537 4.8E-109 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 SUPERFAMILY SSF47203 249 409 1.34E-20 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 PANTHER PTHR10909 9 389 6.3E-203 T 26-04-2016 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 PANTHER PTHR10909:SF300 9 389 6.3E-203 T 26-04-2016 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Gene3D G3DSA:1.20.140.10 227 407 4.0E-51 T 26-04-2016 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 20 411 4.5E-177 T 26-04-2016 IPR023922 Sulphate-starvation-induced SfnB PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 SUPERFAMILY SSF56645 33 234 3.66E-44 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 132 3.1E-8 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 252 386 2.1E-21 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Gene3D G3DSA:1.10.540.10 19 125 1.9E-22 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 PIRSF PIRSF016578 19 402 2.7E-26 T 26-04-2016 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Gene3D G3DSA:2.40.110.10 147 226 1.1E-21 T 26-04-2016 PAM18_RS13860 ab0274837bce5dbb46b776ccf2a03227 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 226 7.4E-10 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 341 41.843 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.180 154 341 1.2E-82 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 PANTHER PTHR24421 1 343 1.7E-180 T 26-04-2016 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF00072 Response regulator receiver domain 5 107 1.6E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52172 1 107 6.4E-27 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 PANTHER PTHR24421:SF21 1 343 1.7E-180 T 26-04-2016 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 PIRSF PIRSF000876 1 345 5.0E-136 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SMART SM00448 3 118 5.4E-20 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF01339 CheB methylesterase 158 336 2.4E-62 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52738 154 341 1.44E-71 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS00875 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.2300 2 131 1.6E-27 T 26-04-2016 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 125 423 1.1E-57 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820:SF1 4 95 9.0E-172 T 26-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820:SF1 119 273 9.0E-172 T 26-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820:SF1 294 427 9.0E-172 T 26-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 Gene3D G3DSA:2.30.30.230 9 121 1.1E-34 T 26-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 Gene3D G3DSA:3.90.850.10 122 420 1.6E-106 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820 4 95 9.0E-172 T 26-04-2016 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820 119 273 9.0E-172 T 26-04-2016 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 PANTHER PTHR11820 294 427 9.0E-172 T 26-04-2016 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 SUPERFAMILY SSF56529 121 425 2.22E-94 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 9 427 9.8E-210 T 26-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 Pfam PF09298 Fumarylacetoacetase N-terminal 23 119 2.1E-23 T 26-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS15570 caa4e4b5a47f21ceb78ff622eaf0cf82 432 SUPERFAMILY SSF63433 8 119 2.62E-30 T 26-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 Gene3D G3DSA:3.40.50.2020 7 212 1.5E-82 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 SUPERFAMILY SSF53271 1 211 3.98E-50 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 6.3E-62 T 26-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 PANTHER PTHR19278 1 213 4.0E-139 T 26-04-2016 PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.028 T 26-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 PANTHER PTHR19278:SF36 1 213 4.0E-139 T 26-04-2016 PAM18_RS27850 43c52eadd3cb5144e8fb035d3e145056 213 Pfam PF00156 Phosphoribosyl transferase domain 44 159 6.5E-12 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS24155 c90efc71ad8967001397d2411333ef26 273 Pfam PF01435 Peptidase family M48 74 257 3.3E-40 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS24155 c90efc71ad8967001397d2411333ef26 273 Gene3D G3DSA:3.30.2010.10 71 158 1.6E-14 T 26-04-2016 PAM18_RS24155 c90efc71ad8967001397d2411333ef26 273 PANTHER PTHR22726 6 272 3.0E-72 T 26-04-2016 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 SUPERFAMILY SSF90123 13 343 6.02E-54 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 SMART SM00382 384 575 7.3E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 Gene3D G3DSA:3.40.50.300 360 592 1.9E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 PANTHER PTHR24221:SF233 1 596 0.0 T 26-04-2016 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 Pfam PF00005 ABC transporter 375 523 4.4E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 PANTHER PTHR24221 1 596 0.0 T 26-04-2016 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 Gene3D G3DSA:1.20.1560.10 13 346 3.9E-53 T 26-04-2016 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 SUPERFAMILY SSF52540 356 591 1.96E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21350 ef1710e973aac843ab241d906b99dd36 596 Pfam PF00664 ABC transporter transmembrane region 63 313 2.7E-28 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 145 184 2.0E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 285 400 2.0E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.1E-130 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 SUPERFAMILY SSF53901 280 400 5.07E-44 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 2.6E-47 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 PIRSF PIRSF000429 1 401 1.3E-113 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 PANTHER PTHR18919 1 228 7.4E-257 T 26-04-2016 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 PANTHER PTHR18919 249 401 7.4E-257 T 26-04-2016 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 PANTHER PTHR18919:SF12 1 228 7.4E-257 T 26-04-2016 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 PANTHER PTHR18919:SF12 249 401 7.4E-257 T 26-04-2016 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Pfam PF00108 Thiolase, N-terminal domain 5 270 1.5E-46 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 SUPERFAMILY SSF53901 3 278 3.84E-62 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 185 284 3.8E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS16975 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 3 126 3.8E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 2 380 72.816 T 26-04-2016 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87|UniPathway: UPA00030|UniPathway: UPA00032 PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 PANTHER PTHR30244 1 381 1.5E-175 T 26-04-2016 PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 PANTHER PTHR30244:SF3 1 381 1.5E-175 T 26-04-2016 PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 PIRSF PIRSF000390 1 382 3.8E-109 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 3.1E-124 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 Gene3D G3DSA:3.90.1150.10 254 380 6.8E-40 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 SUPERFAMILY SSF53383 5 378 2.39E-111 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS07385 a558582b5a934130db5d44584afaaf60 382 Gene3D G3DSA:3.40.640.10 5 252 3.0E-82 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 SMART SM00861 599 792 1.3E-56 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Gene3D G3DSA:3.40.50.970 166 541 1.0E-78 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 797 941 6.5E-55 T 26-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Gene3D G3DSA:3.40.50.970 621 797 1.4E-22 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 1.5E-65 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 SUPERFAMILY SSF52518 126 550 1.06E-87 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 SUPERFAMILY SSF52518 582 799 5.72E-52 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 PIRSF PIRSF000157 1 943 0.0 T 26-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.5E-17 T 26-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF00676 Dehydrogenase E1 component 220 525 4.2E-55 T 26-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 26-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 PANTHER PTHR23152 1 943 0.0 T 26-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PAM18_RS17740 43860ba9ddd2b302e4b10398fd2c109f 943 PANTHER PTHR23152:SF4 1 943 0.0 T 26-04-2016 PAM18_RS29075 ea912c27b50938638e8760c48b9e775d 130 Pfam PF03899 ATP synthase I chain 13 109 7.4E-24 T 26-04-2016 IPR005598 ATP synthase protein I PAM18_RS19455 33322ddcd9aa2331e668982e8dab0f25 296 SUPERFAMILY SSF56112 12 260 1.73E-20 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS19455 33322ddcd9aa2331e668982e8dab0f25 296 Gene3D G3DSA:3.90.1200.10 101 254 3.6E-12 T 26-04-2016 PAM18_RS19455 33322ddcd9aa2331e668982e8dab0f25 296 Pfam PF01636 Phosphotransferase enzyme family 29 256 8.9E-26 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS11220 bf67a68df899f07f1a6c2f371abd4ced 325 Pfam PF13432 Tetratricopeptide repeat 204 253 7.7E-7 T 26-04-2016 PAM18_RS11220 bf67a68df899f07f1a6c2f371abd4ced 325 SUPERFAMILY SSF48452 197 297 1.47E-9 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS11220 bf67a68df899f07f1a6c2f371abd4ced 325 Pfam PF13529 Peptidase_C39 like family 42 150 2.3E-7 T 26-04-2016 PAM18_RS11220 bf67a68df899f07f1a6c2f371abd4ced 325 Gene3D G3DSA:1.25.40.10 197 298 2.9E-12 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 PANTHER PTHR11751 11 73 6.8E-15 T 26-04-2016 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 PANTHER PTHR11751 192 215 6.8E-15 T 26-04-2016 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 SUPERFAMILY SSF46785 5 75 2.57E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 SUPERFAMILY SSF48008 78 215 1.88E-8 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.3E-12 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 SMART SM00345 13 71 5.4E-10 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 Gene3D G3DSA:1.20.120.530 75 218 1.3E-8 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 PANTHER PTHR11751:SF416 11 73 6.8E-15 T 26-04-2016 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 PANTHER PTHR11751:SF416 192 215 6.8E-15 T 26-04-2016 PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 Pfam PF07729 FCD domain 88 202 1.8E-9 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS18045 2ef918ea4193fe87de7286130930f79c 219 Gene3D G3DSA:1.10.10.10 5 72 4.1E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02305 7e5a14b591a175890f85bb40841c8b79 174 SUPERFAMILY SSF50630 31 163 6.05E-36 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS02305 7e5a14b591a175890f85bb40841c8b79 174 PANTHER PTHR38037 1 174 1.9E-59 T 26-04-2016 PAM18_RS02305 7e5a14b591a175890f85bb40841c8b79 174 Pfam PF05618 Putative ATP-dependant zinc protease 30 166 7.4E-49 T 26-04-2016 PAM18_RS02305 7e5a14b591a175890f85bb40841c8b79 174 Gene3D G3DSA:2.40.70.10 31 158 1.6E-34 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS13430 9f004d8c8c8c077d7f16b8f599325cf4 254 SUPERFAMILY SSF53474 8 232 2.24E-41 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13430 9f004d8c8c8c077d7f16b8f599325cf4 254 PANTHER PTHR11487 2 248 1.7E-84 T 26-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 PAM18_RS13430 9f004d8c8c8c077d7f16b8f599325cf4 254 Gene3D G3DSA:3.40.50.1820 170 223 2.4E-26 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13430 9f004d8c8c8c077d7f16b8f599325cf4 254 Gene3D G3DSA:3.40.50.1820 8 115 2.4E-26 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13430 9f004d8c8c8c077d7f16b8f599325cf4 254 Pfam PF00975 Thioesterase domain 8 230 2.7E-53 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 PANTHER PTHR32282 134 738 1.7E-277 T 26-04-2016 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Pfam PF14814 Bifunctional transglycosylase second domain 52 135 8.2E-24 T 26-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Pfam PF00912 Transglycosylase 147 317 4.3E-57 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 PANTHER PTHR32282:SF11 134 738 1.7E-277 T 26-04-2016 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 7 733 0.0 T 26-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 PIRSF PIRSF002799 1 755 0.0 T 26-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 SUPERFAMILY SSF53955 144 341 3.66E-66 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Pfam PF00905 Penicillin binding protein transpeptidase domain 412 642 4.6E-17 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Gene3D G3DSA:3.30.2060.10 50 137 3.4E-23 T 26-04-2016 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Gene3D G3DSA:1.10.3810.10 147 320 2.7E-66 T 26-04-2016 PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Gene3D G3DSA:3.40.710.10 321 733 2.1E-113 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 SUPERFAMILY SSF56601 300 322 4.32E-119 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 SUPERFAMILY SSF56601 351 737 4.32E-119 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS24615 11cdc7e1ad48c7e0650bde00b7a0d985 755 Gene3D G3DSA:1.20.5.100 3 34 1.1E-6 T 26-04-2016 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 34.552 T 26-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 PIRSF PIRSF000495 2 210 8.5E-67 T 26-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 Pfam PF00117 Glutamine amidotransferase class-I 6 206 3.2E-18 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 PANTHER PTHR21235 4 208 2.7E-86 T 26-04-2016 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 PANTHER PTHR21235:SF1 4 208 2.7E-86 T 26-04-2016 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 Gene3D G3DSA:3.40.50.880 1 208 1.9E-77 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 207 3.7E-66 T 26-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 PAM18_RS26880 c98864bdd746071273868e162e6cfb69 212 SUPERFAMILY SSF52317 2 208 3.01E-55 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS12930 4023ab875fc01e234f017f3fb5dbfc05 441 PANTHER PTHR30624 1 440 2.4E-161 T 26-04-2016 PAM18_RS12930 4023ab875fc01e234f017f3fb5dbfc05 441 SUPERFAMILY SSF111283 1 440 1.96E-73 T 26-04-2016 PAM18_RS12930 4023ab875fc01e234f017f3fb5dbfc05 441 PANTHER PTHR30624:SF8 1 440 2.4E-161 T 26-04-2016 PAM18_RS12930 4023ab875fc01e234f017f3fb5dbfc05 441 Pfam PF01523 Putative modulator of DNA gyrase 27 301 1.8E-26 T 26-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 Pfam PF03466 LysR substrate binding domain 90 293 5.0E-26 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.1E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.0E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.0E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.0E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 PANTHER PTHR30126:SF29 4 308 1.0E-139 T 26-04-2016 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 Gene3D G3DSA:3.40.190.10 180 257 7.2E-11 T 26-04-2016 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 Gene3D G3DSA:3.40.190.10 112 179 2.8E-5 T 26-04-2016 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 Gene3D G3DSA:1.10.10.10 5 90 2.2E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 SUPERFAMILY SSF53850 91 297 1.59E-25 T 26-04-2016 PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 SUPERFAMILY SSF46785 5 88 1.25E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02425 9c1a9f93fd9778c7d294e30c1cb186eb 316 PANTHER PTHR30126 4 308 1.0E-139 T 26-04-2016 PAM18_RS23735 2611ef496c8eb338e670b7f7d020e702 185 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 12 158 5.0E-47 T 26-04-2016 IPR013362 Pilus modification type IV, PilV PAM18_RS23735 2611ef496c8eb338e670b7f7d020e702 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 1.0E-5 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23735 2611ef496c8eb338e670b7f7d020e702 185 Pfam PF13633 Prokaryotic N-terminal methylation site 12 35 4.6E-6 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 8.8E-133 T 26-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.7E-50 T 26-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.10.275.10 1 119 1.8E-47 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 SUPERFAMILY SSF48557 10 455 6.44E-106 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PANTHER PTHR11444:SF17 4 456 0.0 T 26-04-2016 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.10.40.30 391 446 9.8E-32 T 26-04-2016 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.20.200.10 120 390 1.6E-88 T 26-04-2016 PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 Pfam PF00206 Lyase 14 313 2.0E-66 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS12050 68f325d0ac2e6b42ebe501805a56536f 456 PANTHER PTHR11444 4 456 0.0 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS20160 10332ea5a64ebc00900c61c0bcd604f9 255 Gene3D G3DSA:3.90.550.10 1 234 5.8E-59 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20160 10332ea5a64ebc00900c61c0bcd604f9 255 Pfam PF02348 Cytidylyltransferase 4 208 5.5E-36 T 26-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS20160 10332ea5a64ebc00900c61c0bcd604f9 255 SUPERFAMILY SSF53448 1 242 2.5E-56 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20160 10332ea5a64ebc00900c61c0bcd604f9 255 PANTHER PTHR21485 1 251 4.1E-66 T 26-04-2016 PAM18_RS20160 10332ea5a64ebc00900c61c0bcd604f9 255 PANTHER PTHR21485:SF4 1 251 4.1E-66 T 26-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 442 8.8E-31 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 PANTHER PTHR10196 1 488 3.2E-175 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 SUPERFAMILY SSF53067 2 252 5.74E-59 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 SUPERFAMILY SSF53067 252 489 4.26E-55 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 PIRSF PIRSF000538 1 492 5.9E-118 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 Gene3D G3DSA:3.30.420.40 1 251 7.2E-53 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 Gene3D G3DSA:3.30.420.40 254 488 9.3E-45 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 250 2.6E-62 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 375 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 PANTHER PTHR10196:SF67 1 488 3.2E-175 T 26-04-2016 PAM18_RS13875 1a19a8919c7a6f74c0d081487737c43a 493 TIGRFAM TIGR01312 XylB: xylulokinase 3 489 1.4E-158 T 26-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 PANTHER PTHR12338 292 3906 0.0 T 26-04-2016 PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 PANTHER PTHR12338 82 276 0.0 T 26-04-2016 PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3971 4080 5.5E-39 T 26-04-2016 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 169 245 1.1E-20 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 Gene3D G3DSA:2.160.20.10 148 407 2.2E-12 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 Pfam PF05860 haemagglutination activity domain 133 248 5.8E-24 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 SUPERFAMILY SSF51126 145 408 1.29E-36 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 SUPERFAMILY SSF51126 456 480 1.29E-36 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 SMART SM00912 132 248 2.6E-29 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 PANTHER PTHR12338:SF6 292 3906 0.0 T 26-04-2016 PAM18_RS22205 2b3f8bf3d006c380f6e75446fe937112 4180 PANTHER PTHR12338:SF6 82 276 0.0 T 26-04-2016 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00433 33 623 1.4E-207 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00387 26 172 8.6E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF54211 216 381 6.83E-45 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 623 0.0 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.230.10 215 389 3.7E-46 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00204 DNA gyrase B 217 384 1.5E-38 T 26-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 5.7E-24 T 26-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF56719 387 620 7.59E-76 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF01751 Toprim domain 412 521 7.3E-13 T 26-04-2016 IPR006171 Toprim domain PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 173 190 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 148 163 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 191 212 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 237 260 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.3E-116 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF55874 4 214 1.69E-68 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.565.10 14 213 5.4E-77 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 26-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 627 46.883 T 26-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PANTHER PTHR10169 3 628 0.0 T 26-04-2016 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 30 45 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 108 122 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 65 78 7.4E-59 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.40.50.670 397 610 2.2E-75 T 26-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 3.3E-19 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25990 bb892b926a4cdda2c050853e35d79aa9 629 PANTHER PTHR10169:SF45 3 628 0.0 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SUPERFAMILY SSF55785 127 254 2.62E-29 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Gene3D G3DSA:3.30.450.20 28 130 2.6E-16 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Gene3D G3DSA:1.10.287.130 277 332 2.3E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Pfam PF13426 PAS domain 31 130 1.3E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Pfam PF13426 PAS domain 156 257 3.6E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 345 1.1E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SUPERFAMILY SSF47384 266 344 4.51E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00448 535 643 4.0E-9 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00387 388 508 5.5E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SUPERFAMILY SSF52172 535 647 9.68E-21 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Gene3D G3DSA:3.30.450.20 131 257 3.1E-29 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 2.8E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 2.8E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 2.8E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 2.8E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00388 281 347 6.3E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SUPERFAMILY SSF55785 28 140 4.05E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00086 217 259 6.3E-4 T 26-04-2016 IPR001610 PAC motif PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00086 89 131 1.9 T 26-04-2016 IPR001610 PAC motif PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Gene3D G3DSA:3.30.565.10 333 508 7.6E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00091 143 212 4.3E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SMART SM00091 15 84 1.4 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 SUPERFAMILY SSF55874 338 508 6.55E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Gene3D G3DSA:3.40.50.2300 535 641 6.8E-20 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PANTHER PTHR24423:SF438 26 639 2.1E-251 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 506 4.5E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 Pfam PF00072 Response regulator receiver domain 537 620 1.0E-13 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 PANTHER PTHR24423 26 639 2.1E-251 T 26-04-2016 PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 266 1.6E-25 T 26-04-2016 IPR000014 PAS domain PAM18_RS14690 a46a511ebd7ba25ad1d3a39c60a458dd 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 138 6.7E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS16315 7100b67f82cdb87a0fcfa1922cb7a5c5 275 Gene3D G3DSA:3.90.1200.10 92 206 4.5E-5 T 26-04-2016 PAM18_RS16315 7100b67f82cdb87a0fcfa1922cb7a5c5 275 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 13 250 1.1E-103 T 26-04-2016 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 PAM18_RS16315 7100b67f82cdb87a0fcfa1922cb7a5c5 275 SUPERFAMILY SSF56112 25 254 3.21E-30 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 436 2.0E-178 T 26-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:3.80.30.20 137 376 1.1E-71 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 6.7E-104 T 26-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF01938 TRAM domain 377 440 1.5E-5 T 26-04-2016 IPR002792 TRAM domain PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 SMART SM00729 139 365 2.6E-51 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 PANTHER PTHR11918 6 440 4.5E-247 T 26-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 61.878 T 26-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 SUPERFAMILY SSF102114 109 370 3.53E-53 T 26-04-2016 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 26-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 PANTHER PTHR11918:SF57 6 440 4.5E-247 T 26-04-2016 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF00919 Uncharacterized protein family UPF0004 7 98 1.0E-20 T 26-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:2.40.50.140 380 440 1.8E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS21050 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF04055 Radical SAM superfamily 145 322 7.4E-27 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS28750 9b337c935c99436850cf4fbe40075df9 225 Gene3D G3DSA:1.10.3720.10 15 220 2.1E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28750 9b337c935c99436850cf4fbe40075df9 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 224 5.1E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28750 9b337c935c99436850cf4fbe40075df9 225 SUPERFAMILY SSF161098 16 212 8.11E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28750 9b337c935c99436850cf4fbe40075df9 225 PANTHER PTHR30450 1 225 9.8E-132 T 26-04-2016 PAM18_RS28750 9b337c935c99436850cf4fbe40075df9 225 PANTHER PTHR30450:SF1 1 225 9.8E-132 T 26-04-2016 PAM18_RS06285 ad8c9ef567bd7e7928137d91bee72126 229 SUPERFAMILY SSF50341 80 224 1.16E-21 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06285 ad8c9ef567bd7e7928137d91bee72126 229 SMART SM00260 78 221 3.3E-5 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06285 ad8c9ef567bd7e7928137d91bee72126 229 Pfam PF01584 CheW-like domain 83 223 1.8E-21 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS06285 ad8c9ef567bd7e7928137d91bee72126 229 PANTHER PTHR22617 78 229 2.5E-19 T 26-04-2016 PAM18_RS29025 5d374c00c71e81be9f7cc8de8f7f5a29 169 Pfam PF01551 Peptidase family M23 50 137 1.1E-19 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS29025 5d374c00c71e81be9f7cc8de8f7f5a29 169 Gene3D G3DSA:2.70.70.10 24 162 4.7E-28 T 26-04-2016 PAM18_RS29025 5d374c00c71e81be9f7cc8de8f7f5a29 169 PANTHER PTHR21666:SF187 1 149 4.5E-72 T 26-04-2016 PAM18_RS29025 5d374c00c71e81be9f7cc8de8f7f5a29 169 PANTHER PTHR21666 1 149 4.5E-72 T 26-04-2016 PAM18_RS29025 5d374c00c71e81be9f7cc8de8f7f5a29 169 SUPERFAMILY SSF51261 23 138 3.56E-27 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 6.8E-138 T 26-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 PANTHER PTHR30420 1 340 8.8E-198 T 26-04-2016 PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 PANTHER PTHR30420:SF1 1 340 8.8E-198 T 26-04-2016 PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 334 1.8E-144 T 26-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 Gene3D G3DSA:3.40.630.30 1 131 2.4E-6 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 SUPERFAMILY SSF55729 1 334 2.41E-128 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 Gene3D G3DSA:2.40.40.20 278 334 1.3E-6 T 26-04-2016 PAM18_RS21160 22fe643c9a5e21234f3f42b5a4eda2d3 340 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 334 1.2E-155 T 26-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 130 140 - T 26-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 SUPERFAMILY SSF52799 44 164 5.85E-23 T 26-04-2016 IPR029021 Protein-tyrosine phosphatase-like PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 Gene3D G3DSA:3.90.190.10 38 168 1.4E-25 T 26-04-2016 IPR029021 Protein-tyrosine phosphatase-like PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 PANTHER PTHR31126 8 180 2.1E-28 T 26-04-2016 PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 Pfam PF03162 Tyrosine phosphatase family 51 163 5.6E-9 T 26-04-2016 IPR004861 Protein-tyrosine phosphatase, SIW14-like PAM18_RS05365 b412c944c64208d877fba20cf05f04e7 218 PANTHER PTHR31126:SF1 8 180 2.1E-28 T 26-04-2016 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 472 8.6E-179 T 26-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 SUPERFAMILY SSF75304 2 480 2.09E-171 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 Gene3D G3DSA:3.90.1300.10 2 480 1.1E-188 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 PANTHER PTHR11895 1 480 8.1E-232 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 94.316 T 26-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 PANTHER PTHR11895:SF7 1 480 8.1E-232 T 26-04-2016 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 Pfam PF01425 Amidase 22 463 3.9E-161 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23365 6191978ab6d27a9e8761719dfac11f6e 483 ProSitePatterns PS00571 Amidases signature. 149 180 - T 26-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 PANTHER PTHR21235:SF2 3 256 2.7E-126 T 26-04-2016 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 49.365 T 26-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 Gene3D G3DSA:3.20.20.70 5 256 3.4E-109 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 Pfam PF00977 Histidine biosynthesis protein 6 240 1.2E-92 T 26-04-2016 IPR006062 Histidine biosynthesis GO:0000105 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 PANTHER PTHR21235 3 256 2.7E-126 T 26-04-2016 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 1.9E-117 T 26-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 PAM18_RS26865 d115299fa9442ae24ea8a295734fe41e 256 SUPERFAMILY SSF51366 3 256 2.67E-84 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 PANTHER PTHR10060 1 265 1.2E-171 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 PIRSF PIRSF005902 1 266 1.1E-63 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 SUPERFAMILY SSF51556 3 263 2.42E-77 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 Pfam PF01026 TatD related DNase 4 261 3.9E-61 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 PANTHER PTHR10060:SF13 1 265 1.2E-171 T 26-04-2016 PAM18_RS10755 03c5e5a2dfe0fb289ba48e790e77550d 267 Gene3D G3DSA:3.20.20.140 1 263 6.6E-81 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 SUPERFAMILY SSF89550 5 262 1.24E-14 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF02811 PHP domain 7 171 5.9E-42 T 26-04-2016 IPR004013 PHP domain GO:0003824 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF14579 Helix-hairpin-helix motif 810 895 9.4E-26 T 26-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:1.10.150.280 836 885 1.1E-5 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:2.40.50.140 992 1090 4.1E-13 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 736 2.9E-176 T 26-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF01336 OB-fold nucleic acid binding domain 1009 1083 5.8E-10 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1045 0.0 T 26-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 SMART SM00481 6 73 2.8E-25 T 26-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:3.20.20.140 5 256 3.3E-24 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 PANTHER PTHR32294:SF0 910 1173 0.0 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 PANTHER PTHR32294:SF0 1 894 0.0 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 PANTHER PTHR32294 910 1173 0.0 T 26-04-2016 PAM18_RS06610 4c997f9b40caaf134b7a8a8c44916c55 1173 PANTHER PTHR32294 1 894 0.0 T 26-04-2016 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:1.10.10.10 3 83 1.7E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 9.3E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 Pfam PF03466 LysR substrate binding domain 88 291 4.7E-48 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 167 259 1.9E-28 T 26-04-2016 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF53850 88 294 6.52E-52 T 26-04-2016 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF46785 5 84 1.19E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 PANTHER PTHR30537 1 306 7.4E-195 T 26-04-2016 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 PANTHER PTHR30537:SF13 1 306 7.4E-195 T 26-04-2016 PAM18_RS00290 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 90 166 1.2E-8 T 26-04-2016 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 PANTHER PTHR11552:SF51 1 552 1.8E-225 T 26-04-2016 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 PIRSF PIRSF000137 3 541 2.1E-146 T 26-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 Gene3D G3DSA:3.50.50.60 3 129 4.1E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 Gene3D G3DSA:3.50.50.60 469 534 4.1E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 Gene3D G3DSA:3.50.50.60 190 316 4.1E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 Pfam PF00732 GMC oxidoreductase 8 298 3.0E-76 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 SUPERFAMILY SSF54373 293 476 2.06E-58 T 26-04-2016 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 PANTHER PTHR11552 1 552 1.8E-225 T 26-04-2016 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 Pfam PF05199 GMC oxidoreductase 390 526 9.7E-39 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 SUPERFAMILY SSF51905 7 291 8.58E-86 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06260 1a484ac763beb60247b0f8cb1036facd 557 SUPERFAMILY SSF51905 475 535 8.58E-86 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 Pfam PF00696 Amino acid kinase family 28 274 7.5E-44 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 37.299 T 26-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 SUPERFAMILY SSF53633 8 298 1.19E-98 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 2.9E-78 T 26-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 Gene3D G3DSA:3.40.1160.10 27 296 6.2E-104 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 PIRSF PIRSF000728 13 297 2.0E-111 T 26-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 2.7E-8 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 2.7E-8 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS27810 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.7E-8 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 314 39.366 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 PANTHER PTHR11265:SF0 3 315 3.7E-150 T 26-04-2016 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 Gene3D G3DSA:3.40.50.150 9 114 4.1E-50 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 Gene3D G3DSA:3.40.50.150 220 314 4.1E-50 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 Pfam PF01795 MraW methylase family 7 313 7.2E-111 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 SUPERFAMILY SSF81799 118 217 2.49E-34 T 26-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 Gene3D G3DSA:1.10.150.170 116 219 5.5E-36 T 26-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 PANTHER PTHR11265 3 315 3.7E-150 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 SUPERFAMILY SSF53335 9 117 5.93E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 SUPERFAMILY SSF53335 217 314 5.93E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 PIRSF PIRSF004486 3 315 3.4E-102 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23050 a5e3db95e43b5c489179b3694c572461 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 313 1.2E-113 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 PANTHER PTHR19308:SF1 18 196 1.0E-150 T 26-04-2016 PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 Pfam PF01852 START domain 17 192 4.4E-15 T 26-04-2016 IPR002913 START domain GO:0008289 PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 PIRSF PIRSF039033 1 196 4.4E-81 T 26-04-2016 IPR028347 START domain-containing protein PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 Gene3D G3DSA:3.30.530.20 17 195 1.3E-36 T 26-04-2016 IPR023393 START-like domain PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 SUPERFAMILY SSF55961 16 195 4.92E-39 T 26-04-2016 PAM18_RS17770 d18008f7fb25192758ff1b8356c21bf8 196 PANTHER PTHR19308 18 196 1.0E-150 T 26-04-2016 PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 Pfam PF10135 Rod binding protein 56 107 1.6E-16 T 26-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 19 385 2.2E-84 T 26-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 SMART SM00047 229 389 2.9E-38 T 26-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 PANTHER PTHR33308 14 392 3.8E-70 T 26-04-2016 PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 SUPERFAMILY SSF53955 204 279 8.62E-5 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 248 386 2.3E-22 T 26-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 PAM18_RS20220 a1e2e469941eca64bf295356d4e5477b 400 PANTHER PTHR33308:SF3 14 392 3.8E-70 T 26-04-2016 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 SUPERFAMILY SSF56003 6 235 9.16E-39 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Gene3D G3DSA:3.30.365.10 386 551 1.8E-36 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 PIRSF PIRSF036389 1 742 2.8E-248 T 26-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 SUPERFAMILY SSF56003 320 744 2.49E-116 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Gene3D G3DSA:3.90.1170.50 183 289 1.9E-25 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 598 673 3.3E-14 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 321 581 4.8E-28 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 40 167 2.4E-22 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Gene3D G3DSA:3.30.365.10 42 182 3.6E-35 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 Gene3D G3DSA:3.30.365.10 552 745 4.6E-45 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 SMART SM01008 204 290 1.1E-20 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 PANTHER PTHR11908:SF22 69 748 0.0 T 26-04-2016 PAM18_RS17660 398c0b83e0a977c23e3597c554892fb7 748 PANTHER PTHR11908 69 748 0.0 T 26-04-2016 PAM18_RS23865 4a2ef102f63dae56db517cd1a2b08b3d 108 PANTHER PTHR33823 31 108 2.3E-26 T 26-04-2016 PAM18_RS23865 4a2ef102f63dae56db517cd1a2b08b3d 108 PANTHER PTHR33823:SF4 31 108 2.3E-26 T 26-04-2016 PAM18_RS23865 4a2ef102f63dae56db517cd1a2b08b3d 108 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 73 103 2.1E-9 T 26-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PAM18_RS23865 4a2ef102f63dae56db517cd1a2b08b3d 108 SUPERFAMILY SSF57716 75 106 1.24E-7 T 26-04-2016 PAM18_RS23865 4a2ef102f63dae56db517cd1a2b08b3d 108 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 78 102 - T 26-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PAM18_RS25980 02364c6021faaf597618473de2a78546 174 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 170 2.4E-32 T 26-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal PAM18_RS25980 02364c6021faaf597618473de2a78546 174 Pfam PF13975 gag-polyprotein putative aspartyl protease 68 156 6.2E-24 T 26-04-2016 PAM18_RS25980 02364c6021faaf597618473de2a78546 174 PANTHER PTHR41535 1 174 7.7E-54 T 26-04-2016 PAM18_RS25980 02364c6021faaf597618473de2a78546 174 PANTHER PTHR41535:SF1 1 174 7.7E-54 T 26-04-2016 PAM18_RS25980 02364c6021faaf597618473de2a78546 174 SUPERFAMILY SSF50630 58 160 3.43E-20 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS24630 a2e21dfa245a3b04ed227be50bd583df 90 Gene3D G3DSA:1.10.150.20 2 87 1.6E-24 T 26-04-2016 PAM18_RS24630 a2e21dfa245a3b04ed227be50bd583df 90 PANTHER PTHR36121 1 90 9.5E-37 T 26-04-2016 PAM18_RS24630 a2e21dfa245a3b04ed227be50bd583df 90 Pfam PF04994 TfoX C-terminal domain 1 80 1.0E-27 T 26-04-2016 IPR007077 TfoX, C-terminal PAM18_RS24630 a2e21dfa245a3b04ed227be50bd583df 90 PANTHER PTHR36121:SF1 1 90 9.5E-37 T 26-04-2016 PAM18_RS04435 f3cc451465756228463b6f4971949605 289 SUPERFAMILY SSF51735 2 286 8.65E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04435 f3cc451465756228463b6f4971949605 289 PANTHER PTHR10491:SF4 1 285 1.0E-56 T 26-04-2016 PAM18_RS04435 f3cc451465756228463b6f4971949605 289 PANTHER PTHR10491 1 285 1.0E-56 T 26-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PAM18_RS04435 f3cc451465756228463b6f4971949605 289 Gene3D G3DSA:3.40.50.720 34 225 1.3E-22 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04435 f3cc451465756228463b6f4971949605 289 Pfam PF04321 RmlD substrate binding domain 1 285 6.8E-78 T 26-04-2016 IPR029903 RmlD-like substrate binding domain PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 SUPERFAMILY SSF53850 93 296 1.77E-29 T 26-04-2016 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 Pfam PF03466 LysR substrate binding domain 92 293 1.2E-33 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 Gene3D G3DSA:3.40.190.10 179 261 1.5E-14 T 26-04-2016 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.3E-22 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 Gene3D G3DSA:1.10.10.10 1 86 1.3E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 PANTHER PTHR30537:SF26 1 297 5.6E-117 T 26-04-2016 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 SUPERFAMILY SSF46785 2 86 1.19E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 PANTHER PTHR30537 1 297 5.6E-117 T 26-04-2016 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 Gene3D G3DSA:3.40.190.10 93 178 1.0E-20 T 26-04-2016 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.82E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.82E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27660 2f23e489114d62892c5910664e64c5ae 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.82E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17375 885429cfa6d0d7927d88552308bbf46b 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 5.7E-51 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS17375 885429cfa6d0d7927d88552308bbf46b 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 158 1.2E-52 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS17375 885429cfa6d0d7927d88552308bbf46b 168 PANTHER PTHR35850:SF2 1 168 9.1E-93 T 26-04-2016 PAM18_RS17375 885429cfa6d0d7927d88552308bbf46b 168 PIRSF PIRSF028301 1 168 1.2E-56 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS17375 885429cfa6d0d7927d88552308bbf46b 168 PANTHER PTHR35850 1 168 9.1E-93 T 26-04-2016 PAM18_RS23630 0b0f22b4457e926da839153699d001ff 141 Pfam PF00583 Acetyltransferase (GNAT) family 50 121 2.8E-10 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS23630 0b0f22b4457e926da839153699d001ff 141 Gene3D G3DSA:3.40.630.30 1 120 2.3E-19 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS23630 0b0f22b4457e926da839153699d001ff 141 PANTHER PTHR23091 1 120 1.4E-12 T 26-04-2016 PAM18_RS23630 0b0f22b4457e926da839153699d001ff 141 SUPERFAMILY SSF55729 1 127 8.14E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 1.8E-5 T 26-04-2016 PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322:SF482 164 196 3.0E-65 T 26-04-2016 PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322:SF482 50 148 3.0E-65 T 26-04-2016 PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322:SF482 14 33 3.0E-65 T 26-04-2016 PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 Pfam PF00106 short chain dehydrogenase 10 196 3.9E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 Gene3D G3DSA:3.40.50.720 5 255 4.1E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.4E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 SUPERFAMILY SSF51735 5 252 1.03E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322 164 196 3.0E-65 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322 50 148 3.0E-65 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PANTHER PTHR24322 14 33 3.0E-65 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.1E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.1E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07905 36690cc9f643e51f90a7aea8119a5033 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.1E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 PANTHER PTHR23089 2 112 4.4E-51 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 92 102 1.4E-19 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 25 43 1.4E-19 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 4 20 1.4E-19 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 26-04-2016 IPR019808 Histidine triad, conserved site PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 Gene3D G3DSA:3.30.428.10 2 112 1.7E-42 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 SUPERFAMILY SSF54197 1 111 3.54E-40 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 PANTHER PTHR23089:SF2 2 112 4.4E-51 T 26-04-2016 PAM18_RS03230 82798b4769b956f52734b08f00ad3638 112 Pfam PF01230 HIT domain 11 106 8.4E-26 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS09185 d62c6bdc6961cbeee6645913ffec0863 145 PANTHER PTHR22769:SF17 5 142 3.9E-32 T 26-04-2016 PAM18_RS09185 d62c6bdc6961cbeee6645913ffec0863 145 PANTHER PTHR22769 5 142 3.9E-32 T 26-04-2016 PAM18_RS09185 d62c6bdc6961cbeee6645913ffec0863 145 Pfam PF00293 NUDIX domain 17 124 5.8E-12 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS09185 d62c6bdc6961cbeee6645913ffec0863 145 Gene3D G3DSA:3.90.79.10 18 137 2.8E-18 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS09185 d62c6bdc6961cbeee6645913ffec0863 145 SUPERFAMILY SSF55811 3 142 2.84E-20 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 PIRSF PIRSF006092 1 158 1.8E-52 T 26-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 2.5E-28 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF46557 3 78 1.02E-27 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF54534 82 157 2.09E-24 T 26-04-2016 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:1.10.287.180 1 75 5.6E-33 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.903 T 26-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.3E-57 T 26-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 26-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 26-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:3.10.50.30 82 156 5.3E-31 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.2E-29 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PAM18_RS24905 1a023b65d9a9021d5826c3be752dca2c 158 PANTHER PTHR30437 1 156 4.5E-67 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 Gene3D G3DSA:3.40.190.10 179 261 4.1E-22 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.9E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 Pfam PF03466 LysR substrate binding domain 89 293 3.2E-42 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 PANTHER PTHR30126:SF26 1 307 3.1E-154 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 Gene3D G3DSA:1.10.10.10 4 87 6.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 Gene3D G3DSA:3.40.190.10 92 178 2.3E-20 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 PANTHER PTHR30126 1 307 3.1E-154 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 SUPERFAMILY SSF53850 90 294 8.69E-41 T 26-04-2016 PAM18_RS10900 c526b668800e22b18baa13341713a4d7 323 SUPERFAMILY SSF46785 6 111 3.8E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09175 5e2481805c13899747ec3bb0733b67c0 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 16 232 1.6E-72 T 26-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 PAM18_RS09175 5e2481805c13899747ec3bb0733b67c0 238 Gene3D G3DSA:3.40.50.1360 21 237 1.8E-50 T 26-04-2016 PAM18_RS09175 5e2481805c13899747ec3bb0733b67c0 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 228 6.5E-52 T 26-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PAM18_RS09175 5e2481805c13899747ec3bb0733b67c0 238 PANTHER PTHR11054 14 237 1.4E-53 T 26-04-2016 PAM18_RS09175 5e2481805c13899747ec3bb0733b67c0 238 SUPERFAMILY SSF100950 14 235 2.58E-54 T 26-04-2016 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52467 187 308 1.45E-48 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 PANTHER PTHR10909 104 305 7.1E-132 T 26-04-2016 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 PANTHER PTHR10909:SF294 104 305 7.1E-132 T 26-04-2016 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 26-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 6.7E-37 T 26-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.1220 184 308 9.4E-62 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 SMART SM00893 3 182 2.8E-55 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 PIRSF PIRSF000089 1 309 3.8E-106 T 26-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52402 3 184 1.34E-56 T 26-04-2016 PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.620 1 182 9.1E-65 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS10320 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF01012 Electron transfer flavoprotein domain 4 169 2.3E-39 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:1.10.3850.10 804 1017 4.0E-50 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:1.10.3850.10 276 489 1.2E-42 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82693 42 136 1.83E-19 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PANTHER PTHR32063:SF18 2 1024 0.0 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82693 140 184 6.28E-17 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82693 270 325 6.28E-17 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Pfam PF00873 AcrB/AcrD/AcrF family 7 1013 1.3E-171 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82714 187 267 1.7E-11 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:3.30.70.1430 565 652 2.1E-4 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82714 714 800 2.75E-14 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:3.30.70.1430 42 138 4.1E-20 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PANTHER PTHR32063 2 1024 0.0 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82693 566 659 7.59E-5 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:3.30.2090.10 187 267 1.5E-12 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 Gene3D G3DSA:3.30.2090.10 715 800 1.6E-13 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82866 301 490 2.22E-36 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 SUPERFAMILY SSF82866 796 1020 5.89E-47 T 26-04-2016 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS06430 fa7aefe38557743fd5a1f61347fce000 1025 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.0E-23 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02700 49e471403422a0cce68d894915346281 496 SUPERFAMILY SSF55785 136 251 2.79E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Pfam PF13426 PAS domain 160 252 6.6E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Pfam PF13426 PAS domain 280 377 5.0E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 SMART SM00091 142 209 0.063 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 SMART SM00091 267 336 0.081 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 SMART SM00091 13 84 0.074 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Pfam PF13188 PAS domain 14 66 3.2E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Pfam PF00196 Bacterial regulatory proteins, luxR family 426 480 1.3E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 440 456 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 426 440 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 456 468 2.1E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 PANTHER PTHR24423 136 391 9.2E-22 T 26-04-2016 PAM18_RS02700 49e471403422a0cce68d894915346281 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 262 1.6E-13 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 386 4.7E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Gene3D G3DSA:1.10.10.10 400 484 9.5E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 SMART SM00421 423 480 3.8E-24 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 SUPERFAMILY SSF55785 10 135 4.54E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS02700 49e471403422a0cce68d894915346281 496 Gene3D G3DSA:3.30.450.20 139 251 1.3E-14 T 26-04-2016 PAM18_RS02700 49e471403422a0cce68d894915346281 496 SUPERFAMILY SSF46894 416 485 2.28E-20 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS02700 49e471403422a0cce68d894915346281 496 Gene3D G3DSA:3.30.450.20 255 376 2.4E-17 T 26-04-2016 PAM18_RS02700 49e471403422a0cce68d894915346281 496 Gene3D G3DSA:3.30.450.20 9 133 1.8E-8 T 26-04-2016 PAM18_RS02700 49e471403422a0cce68d894915346281 496 SUPERFAMILY SSF55785 255 377 1.92E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 231 7.3E-22 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 SUPERFAMILY SSF75516 9 160 2.62E-36 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 PANTHER PTHR26402:SF102 172 239 6.0E-32 T 26-04-2016 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 SMART SM00421 174 231 5.2E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 Gene3D G3DSA:1.10.10.10 180 237 3.7E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 Pfam PF03472 Autoinducer binding domain 18 158 7.9E-37 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 SUPERFAMILY SSF46894 170 237 7.82E-16 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 1.7E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 1.7E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 1.7E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 PANTHER PTHR26402 172 239 6.0E-32 T 26-04-2016 PAM18_RS18935 997c6c9d59fff099b44ac00dcd232cd6 239 Gene3D G3DSA:3.30.450.80 6 179 4.9E-39 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PANTHER PTHR23501:SF48 2 401 9.9E-93 T 26-04-2016 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PRINTS PR01035 Tetracycline resistance protein signature 248 268 6.3E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PRINTS PR01035 Tetracycline resistance protein signature 83 107 6.3E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PRINTS PR01035 Tetracycline resistance protein signature 141 163 6.3E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PRINTS PR01035 Tetracycline resistance protein signature 52 71 6.3E-9 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 Pfam PF07690 Major Facilitator Superfamily 21 310 4.0E-35 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 Gene3D G3DSA:1.20.1250.20 17 186 2.9E-32 T 26-04-2016 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 Gene3D G3DSA:1.20.1250.20 224 384 7.3E-11 T 26-04-2016 PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 SUPERFAMILY SSF103473 6 387 1.96E-54 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS29010 e1324c4c68b2043a422a80b4d0405f30 401 PANTHER PTHR23501 2 401 9.9E-93 T 26-04-2016 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 PANTHER PTHR26402 1 221 4.3E-168 T 26-04-2016 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00072 Response regulator receiver domain 3 111 8.3E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:3.40.50.2300 1 120 7.5E-39 T 26-04-2016 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:1.10.10.10 123 221 1.4E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SUPERFAMILY SSF52172 1 176 1.13E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00448 1 111 2.3E-40 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 PANTHER PTHR26402:SF575 1 221 4.3E-168 T 26-04-2016 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00862 145 220 9.6E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 3.4E-97 T 26-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PAM18_RS18900 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 65.563 T 26-04-2016 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 UniPathway: UPA00030|UniPathway: UPA00036 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 PANTHER PTHR10587 98 173 8.1E-17 T 26-04-2016 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 PANTHER PTHR10587 5 61 8.1E-17 T 26-04-2016 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 Gene3D G3DSA:3.20.20.370 13 38 4.6E-29 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 Gene3D G3DSA:3.20.20.370 86 266 4.6E-29 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 Pfam PF01522 Polysaccharide deacetylase 15 170 1.0E-13 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 SUPERFAMILY SSF88713 85 266 2.78E-30 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS07370 6a4b5f27b434a9e207b1f580b12d3449 295 SUPERFAMILY SSF88713 14 41 2.78E-30 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 Gene3D G3DSA:3.40.50.720 5 189 2.8E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 PIRSF PIRSF000105 4 301 2.7E-55 T 26-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 256 5.1E-15 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 184 9.7E-40 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 SUPERFAMILY SSF48179 188 275 1.28E-14 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 8 318 54.18 T 26-04-2016 IPR026578 L-carnitine dehydrogenase KEGG: 00040+1.1.1.10|MetaCyc: PWY-3602|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7472|UniPathway: UPA00117 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 SUPERFAMILY SSF51735 6 185 9.86E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 PANTHER PTHR23309 1 315 6.3E-104 T 26-04-2016 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 PANTHER PTHR23309:SF17 1 315 6.3E-104 T 26-04-2016 PAM18_RS28150 ea0735c99aa431f9e5e7277cf4733620 321 Gene3D G3DSA:1.10.1040.10 190 264 4.2E-9 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 SUPERFAMILY SSF56176 337 418 4.91E-18 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 SUPERFAMILY SSF54631 192 328 1.17E-28 T 26-04-2016 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Pfam PF00571 CBS domain 277 325 1.9E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Pfam PF00571 CBS domain 216 261 3.7E-4 T 26-04-2016 IPR000644 CBS domain PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Pfam PF03471 Transporter associated domain 341 414 1.2E-14 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Gene3D G3DSA:3.10.580.10 194 317 2.7E-22 T 26-04-2016 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Pfam PF01595 Domain of unknown function DUF21 12 165 3.4E-37 T 26-04-2016 IPR002550 Domain of unknown function DUF21 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 SMART SM01091 340 418 3.4E-18 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 PANTHER PTHR22777 1 413 1.5E-137 T 26-04-2016 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 Gene3D G3DSA:3.30.465.10 318 414 1.4E-21 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 PANTHER PTHR22777:SF3 1 413 1.5E-137 T 26-04-2016 PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 SMART SM00116 277 325 1.2 T 26-04-2016 IPR000644 CBS domain PAM18_RS06065 94c2dc956ca4548b96411b5a45fbd1c6 430 SMART SM00116 213 262 7.2 T 26-04-2016 IPR000644 CBS domain PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 Gene3D G3DSA:3.40.47.10 5 203 3.5E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 11 200 1.3E-21 T 26-04-2016 IPR001099 Chalcone/stilbene synthase, N-terminal PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 PANTHER PTHR11877 11 349 2.9E-71 T 26-04-2016 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 SUPERFAMILY SSF53901 8 205 1.14E-47 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 214 342 1.3E-13 T 26-04-2016 IPR012328 Chalcone/stilbene synthase, C-terminal PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 Gene3D G3DSA:3.40.47.10 206 347 6.2E-31 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 SUPERFAMILY SSF53901 206 347 2.35E-31 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 PIRSF PIRSF000451 1 349 1.2E-110 T 26-04-2016 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 PAM18_RS12235 cbd3b127220f842a7e0176f6344cb23d 349 PANTHER PTHR11877:SF10 11 349 2.9E-71 T 26-04-2016 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 221 56.386 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 Pfam PF06508 Queuosine biosynthesis protein QueC 5 215 3.6E-80 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 PIRSF PIRSF006293 2 224 2.0E-79 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 PANTHER PTHR11587 1 223 1.5E-114 T 26-04-2016 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 PANTHER PTHR11587:SF3 1 223 1.5E-114 T 26-04-2016 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 Gene3D G3DSA:3.40.50.620 3 223 4.7E-80 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 SUPERFAMILY SSF52402 4 223 9.04E-65 T 26-04-2016 PAM18_RS20735 5102d6f66d08de4767752a011e035a71 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 208 1.2E-62 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 Gene3D G3DSA:3.40.50.300 3 168 4.0E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 28 41 3.2E-24 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 95 112 3.2E-24 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 56 64 3.2E-24 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 4 19 3.2E-24 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 74 83 3.2E-24 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 29.419 T 26-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 SUPERFAMILY SSF52540 3 166 4.21E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 Pfam PF01202 Shikimate kinase 10 166 1.8E-55 T 26-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 26-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PANTHER PTHR21087:SF0 3 167 1.2E-66 T 26-04-2016 PAM18_RS26360 136bbde33741f015c5ac556f2224b4f1 172 PANTHER PTHR21087 3 167 1.2E-66 T 26-04-2016 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Gene3D G3DSA:2.40.30.10 46 131 1.4E-17 T 26-04-2016 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 291 339 1.1E-4 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Pfam PF00970 Oxidoreductase FAD-binding domain 75 141 4.3E-6 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Gene3D G3DSA:3.10.20.30 265 365 2.1E-17 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 318 326 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 PANTHER PTHR19370 12 258 6.9E-37 T 26-04-2016 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Gene3D G3DSA:3.40.50.80 132 258 5.5E-23 T 26-04-2016 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 SUPERFAMILY SSF63380 40 142 4.48E-19 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 SUPERFAMILY SSF52343 146 270 2.88E-23 T 26-04-2016 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 SUPERFAMILY SSF54292 265 365 3.41E-18 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS25590 6818ec22eb6cafe7661ff3e20c771146 366 Pfam PF00175 Oxidoreductase NAD-binding domain 151 254 4.1E-9 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04563 RNA polymerase beta subunit 26 504 6.2E-41 T 26-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 4.0E-20 T 26-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856:SF20 1051 1145 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856:SF20 345 730 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856:SF20 1197 1357 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856:SF20 748 935 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856:SF20 5 234 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.349 T 26-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.30.150.10 597 661 1.7E-23 T 26-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1110.10 157 234 8.6E-67 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1110.10 351 449 8.6E-67 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 664 718 9.7E-150 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 20 155 9.7E-150 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 450 596 9.7E-150 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 1056 1357 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 11 230 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 348 944 0.0 T 26-04-2016 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.150 1062 1076 4.9E-58 T 26-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.150 833 942 4.9E-58 T 26-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1354 0.0 T 26-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856 1051 1145 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856 345 730 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856 1197 1357 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856 748 935 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 PANTHER PTHR20856 5 234 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.270.10 798 825 2.0E-87 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.270.10 1077 1257 2.0E-87 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 1.9E-160 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1356 4.2E-27 T 26-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 26-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 227 1.7E-8 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 359 459 1.0E-14 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 6.5E-31 T 26-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03390 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.100 719 797 5.7E-32 T 26-04-2016 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 26-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 SUPERFAMILY SSF57802 1 53 6.73E-23 T 26-04-2016 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 PIRSF PIRSF000071 1 55 5.5E-25 T 26-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 3 19 5.7E-9 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 33 49 5.7E-9 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 Pfam PF00301 Rubredoxin 3 49 2.7E-23 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS27950 e3804477997e34626629aecd705085ad 55 Gene3D G3DSA:2.20.28.10 1 53 1.3E-27 T 26-04-2016 IPR004039 Rubredoxin-type fold PAM18_RS29015 827694920d49b6a33936072092d12318 611 SUPERFAMILY SSF53697 246 611 3.62E-118 T 26-04-2016 PAM18_RS29015 827694920d49b6a33936072092d12318 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 9.2E-258 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Gene3D G3DSA:3.40.50.10490 445 611 1.0E-64 T 26-04-2016 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Gene3D G3DSA:3.60.20.10 2 236 3.5E-77 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS29015 827694920d49b6a33936072092d12318 611 Gene3D G3DSA:3.40.50.10490 245 444 4.3E-79 T 26-04-2016 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Pfam PF13522 Glutamine amidotransferase domain 67 182 1.9E-20 T 26-04-2016 PAM18_RS29015 827694920d49b6a33936072092d12318 611 PANTHER PTHR10937:SF0 1 611 0.0 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Pfam PF01380 SIS domain 464 593 1.7E-25 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Pfam PF01380 SIS domain 291 418 3.7E-33 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS29015 827694920d49b6a33936072092d12318 611 SUPERFAMILY SSF56235 2 235 2.57E-73 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS29015 827694920d49b6a33936072092d12318 611 PANTHER PTHR10937 1 611 0.0 T 26-04-2016 PAM18_RS29015 827694920d49b6a33936072092d12318 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.702 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 Pfam PF05161 MOFRL family 307 412 2.3E-35 T 26-04-2016 IPR007835 MOFRL domain PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 Gene3D G3DSA:3.40.50.10180 9 240 1.3E-95 T 26-04-2016 PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 SUPERFAMILY SSF82544 4 418 8.37E-147 T 26-04-2016 PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 Gene3D G3DSA:3.40.1480.10 241 419 5.7E-67 T 26-04-2016 IPR007835 MOFRL domain PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 PANTHER PTHR12227:SF0 1 421 2.1E-148 T 26-04-2016 PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 PANTHER PTHR12227 1 421 2.1E-148 T 26-04-2016 PAM18_RS18590 838ceab0441f7b85925754d4d264975b 421 Pfam PF13660 Domain of unknown function (DUF4147) 9 229 1.5E-77 T 26-04-2016 IPR025286 MOFRL-associated domain PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 Pfam PF00005 ABC transporter 27 181 4.6E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 PANTHER PTHR24220:SF380 6 234 7.5E-125 T 26-04-2016 PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 SUPERFAMILY SSF52540 4 227 4.31E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 226 2.4E-107 T 26-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 PANTHER PTHR24220 6 234 7.5E-125 T 26-04-2016 PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 SMART SM00382 36 233 1.9E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08175 3810e3243d07f850309959d8186e5a0e 238 Gene3D G3DSA:3.40.50.300 3 227 1.4E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 Gene3D G3DSA:3.90.1510.10 42 274 3.7E-95 T 26-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 Pfam PF02595 Glycerate kinase family 3 372 4.0E-149 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 2.3E-162 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 PANTHER PTHR21599 1 377 6.1E-162 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 PANTHER PTHR21599:SF0 1 377 6.1E-162 T 26-04-2016 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 PIRSF PIRSF006078 1 377 2.3E-134 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PAM18_RS20390 eaa75433cc5e5f5adb32fedd4842866c 381 SUPERFAMILY SSF110738 1 374 1.44E-135 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 SUPERFAMILY SSF141322 370 436 9.29E-8 T 26-04-2016 PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 Gene3D G3DSA:2.40.50.140 381 435 9.3E-6 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 Gene3D G3DSA:3.90.226.10 173 195 2.5E-16 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 Gene3D G3DSA:3.90.226.10 27 127 2.5E-16 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 Pfam PF01957 NfeD-like C-terminal, partner-binding 298 436 3.7E-32 T 26-04-2016 IPR002810 NfeD-like, C-terminal domain PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 PANTHER PTHR33507 1 440 1.1E-160 T 26-04-2016 PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 PANTHER PTHR33507:SF1 1 440 1.1E-160 T 26-04-2016 PAM18_RS02275 8fd1fe7d9d8522ef2c045b24a16fbc60 443 SUPERFAMILY SSF52096 25 194 6.55E-26 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 PANTHER PTHR11695 16 339 1.7E-111 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 9.3E-8 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 SUPERFAMILY SSF51735 119 274 4.99E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 Gene3D G3DSA:3.40.50.720 143 305 1.2E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 Gene3D G3DSA:3.90.180.10 3 142 2.5E-25 T 26-04-2016 IPR011032 GroES-like PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 SMART SM00829 11 335 2.1E-13 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 Pfam PF13602 Zinc-binding dehydrogenase 189 335 2.9E-17 T 26-04-2016 PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 PANTHER PTHR11695:SF605 16 339 1.7E-111 T 26-04-2016 PAM18_RS13130 7a37a634980b1d18b5351482468e1870 339 SUPERFAMILY SSF50129 3 151 2.65E-28 T 26-04-2016 IPR011032 GroES-like PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PANTHER PTHR32195:SF19 4 409 5.5E-201 T 26-04-2016 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PANTHER PTHR32195 4 409 5.5E-201 T 26-04-2016 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 Pfam PF03222 Tryptophan/tyrosine permease family 23 371 1.7E-35 T 26-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 97 117 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 320 338 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 284 303 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 25 48 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 341 360 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS16015 6839933d1f3801ff2dade9518a7cc9b3 410 PRINTS PR00166 Aromatic amino acid permease signature 52 71 1.4E-13 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 SUPERFAMILY SSF54637 44 153 3.23E-6 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 PRINTS PR01483 Fatty acid synthase signature 203 224 6.76E-5 T 26-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 PRINTS PR01483 Fatty acid synthase signature 181 203 6.76E-5 T 26-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 PANTHER PTHR13078 1 285 6.3E-198 T 26-04-2016 PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 Gene3D G3DSA:3.10.129.10 63 154 3.2E-5 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 SUPERFAMILY SSF54637 174 260 2.01E-18 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 Pfam PF01575 MaoC like domain 180 254 1.8E-12 T 26-04-2016 IPR002539 MaoC-like domain PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 Gene3D G3DSA:3.10.129.10 176 264 2.0E-22 T 26-04-2016 IPR029069 HotDog domain PAM18_RS25075 433e9e2ec9b60c382c4ac4eb1b776425 285 PANTHER PTHR13078:SF54 1 285 6.3E-198 T 26-04-2016 PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 PANTHER PTHR24220:SF218 17 235 4.1E-52 T 26-04-2016 PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 SMART SM00382 40 226 8.6E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 SUPERFAMILY SSF52540 9 218 4.87E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 Gene3D G3DSA:3.40.50.300 14 236 8.5E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 Pfam PF00005 ABC transporter 31 171 1.1E-21 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13550 cae26d637b67a91be4a477bb243df161 251 PANTHER PTHR24220 17 235 4.1E-52 T 26-04-2016 PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 PANTHER PTHR30163 6 448 5.7E-214 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 Pfam PF13406 Transglycosylase SLT domain 75 369 1.8E-111 T 26-04-2016 IPR031304 Transglycosylase SLT domain 2 PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 75 373 6.9E-119 T 26-04-2016 IPR011970 Lytic murein transglycosylase PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 Gene3D G3DSA:1.10.101.10 391 446 2.2E-14 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 SUPERFAMILY SSF47090 377 446 3.4E-17 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 Pfam PF01471 Putative peptidoglycan binding domain 391 445 2.0E-12 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 PANTHER PTHR30163:SF2 6 448 5.7E-214 T 26-04-2016 PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 SUPERFAMILY SSF53955 68 375 7.87E-105 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 Gene3D G3DSA:1.10.530.10 119 176 1.3E-57 T 26-04-2016 PAM18_RS04815 24524dc5f4d8355a700a959fa1f17038 448 Gene3D G3DSA:1.10.530.10 257 374 1.3E-57 T 26-04-2016 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.6E-30 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 SUPERFAMILY SSF117130 1 54 5.49E-21 T 26-04-2016 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.924 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 PANTHER PTHR34984 1 61 5.3E-33 T 26-04-2016 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 PANTHER PTHR34984:SF1 1 61 5.3E-33 T 26-04-2016 PAM18_RS21120 fa9b8186011d8703acefd188d493bd6d 61 Pfam PF02599 Global regulator protein family 1 53 9.4E-27 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 Pfam PF05229 Spore Coat Protein U domain 14 160 5.4E-25 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 Pfam PF05229 Spore Coat Protein U domain 185 311 3.8E-32 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 PANTHER PTHR37089 1 315 3.1E-188 T 26-04-2016 PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 PANTHER PTHR37089:SF1 1 315 3.1E-188 T 26-04-2016 PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 SMART SM00972 257 312 1.9E-15 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24270 9e3ad68c13060f231b015b524c2b405f 315 SMART SM00972 97 162 5.0E-16 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PANTHER PTHR22931:SF15 445 936 1.4E-278 T 26-04-2016 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 646 927 1.4E-102 T 26-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:3.50.30.10 528 645 7.3E-35 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 364 9.4E-14 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF55804 148 274 3.92E-16 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR00107 Phosphocarrier protein signature 337 354 6.4E-8 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR00107 Phosphocarrier protein signature 322 337 6.4E-8 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR00107 Phosphocarrier protein signature 294 310 6.4E-8 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF52009 519 634 5.1E-31 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:1.10.274.10 430 527 1.5E-26 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:3.40.930.10 148 276 9.9E-12 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 833 851 - T 26-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:3.40.930.10 4 140 1.1E-34 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Pfam PF00391 PEP-utilising enzyme, mobile domain 545 617 8.5E-22 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 850 865 9.5E-19 T 26-04-2016 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 833 848 9.5E-19 T 26-04-2016 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 886 898 9.5E-19 T 26-04-2016 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 685 704 9.5E-19 T 26-04-2016 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF47831 430 537 2.22E-23 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 406 952 7.8E-143 T 26-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 1.2E-26 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:3.20.20.60 651 954 1.4E-102 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF55594 284 371 5.1E-18 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Gene3D G3DSA:3.30.1340.10 284 372 1.2E-21 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Pfam PF00381 PTS HPr component phosphorylation site 285 365 5.6E-18 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 Pfam PF05524 PEP-utilising enzyme, N-terminal 405 520 8.8E-21 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF51621 646 926 2.66E-99 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 SUPERFAMILY SSF55804 4 141 4.71E-35 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 576 587 - T 26-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PAM18_RS07335 2509836b189c65437dddbc73e3387163 956 PANTHER PTHR22931 445 936 1.4E-278 T 26-04-2016 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 PANTHER PTHR11751 26 82 2.3E-15 T 26-04-2016 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 PANTHER PTHR11751 129 152 2.3E-15 T 26-04-2016 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 SUPERFAMILY SSF46785 18 84 6.81E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 77 2.1E-10 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 SMART SM00895 90 220 5.8E-12 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 Gene3D G3DSA:1.20.120.530 98 228 4.7E-20 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 PANTHER PTHR11751:SF362 26 82 2.3E-15 T 26-04-2016 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 PANTHER PTHR11751:SF362 129 152 2.3E-15 T 26-04-2016 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 SMART SM00345 22 80 4.8E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 SUPERFAMILY SSF48008 101 227 6.8E-19 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 Gene3D G3DSA:1.10.10.10 17 81 1.1E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03845 443f9e78f7187e816fb1e86599a15ba5 242 Pfam PF07729 FCD domain 101 219 1.7E-18 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 Gene3D G3DSA:3.40.50.1000 1 19 4.7E-45 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 Gene3D G3DSA:3.40.50.1000 83 216 4.7E-45 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 SUPERFAMILY SSF56784 3 217 7.63E-62 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 Gene3D G3DSA:1.10.150.240 20 82 3.8E-11 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 184 6.3E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 1.7E-34 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 214 1.7E-52 T 26-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 PANTHER PTHR18901:SF24 1 217 4.9E-121 T 26-04-2016 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 3 217 35.587 T 26-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 180 6.4E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS09225 53c9fa9254651c481bde666ab0277fee 223 PANTHER PTHR18901 1 217 4.9E-121 T 26-04-2016 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 PANTHER PTHR10210:SF41 2 313 3.4E-183 T 26-04-2016 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 SUPERFAMILY SSF53271 69 305 6.07E-64 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 PANTHER PTHR10210 2 313 3.4E-183 T 26-04-2016 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 Gene3D G3DSA:3.40.50.2020 2 159 3.7E-74 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 313 2.1E-32 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 26-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 Gene3D G3DSA:3.40.50.2020 160 286 2.0E-54 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 SMART SM01400 4 121 1.0E-76 T 26-04-2016 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.0E-48 T 26-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 48.286 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PAM18_RS24360 c52b2898cfaabd9cdd6c9f648cf29019 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 313 8.0E-124 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 SUPERFAMILY SSF51713 2 365 7.59E-161 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 362 5.1E-90 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 PANTHER PTHR21148:SF26 1 366 1.8E-177 T 26-04-2016 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 368 8.2E-167 T 26-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 360 56.561 T 26-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 PANTHER PTHR21148 1 366 1.8E-177 T 26-04-2016 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 Gene3D G3DSA:3.20.20.105 2 366 1.7E-166 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05660 952db357ac5d79caf117c56c9102f129 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 367 1.1E-158 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS04695 909c4e093bf9b478a653a1dc397889fd 213 SUPERFAMILY SSF51735 5 198 4.09E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04695 909c4e093bf9b478a653a1dc397889fd 213 Gene3D G3DSA:3.40.50.720 3 211 1.7E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04695 909c4e093bf9b478a653a1dc397889fd 213 PANTHER PTHR14097 1 213 1.8E-66 T 26-04-2016 PAM18_RS04695 909c4e093bf9b478a653a1dc397889fd 213 Pfam PF08732 HIM1 57 156 3.2E-7 T 26-04-2016 IPR014843 Protein Him1/Fmp52 PAM18_RS04695 909c4e093bf9b478a653a1dc397889fd 213 PANTHER PTHR14097:SF7 1 213 1.8E-66 T 26-04-2016 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 SUPERFAMILY SSF50022 24 167 4.71E-44 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 Gene3D G3DSA:2.102.10.10 55 158 3.2E-24 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 Gene3D G3DSA:3.90.380.10 159 413 2.8E-19 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 SUPERFAMILY SSF55961 168 416 3.38E-53 T 26-04-2016 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PANTHER PTHR21266:SF2 33 412 6.6E-118 T 26-04-2016 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 188 412 2.9E-46 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 Pfam PF00355 Rieske [2Fe-2S] domain 56 131 1.6E-16 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 85 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 112 132 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 40 65 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 91 111 1.8E-27 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS28270 f83954f74eb4c7683f2645ce7c221290 429 PANTHER PTHR21266 33 412 6.6E-118 T 26-04-2016 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 7.4E-98 T 26-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PANTHER PTHR10992:SF861 1 262 3.2E-176 T 26-04-2016 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 Pfam PF00561 alpha/beta hydrolase fold 22 246 4.1E-17 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 SUPERFAMILY SSF53474 2 260 9.87E-61 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 Gene3D G3DSA:3.40.50.1820 3 260 5.3E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 2.2E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.2E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.2E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.2E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01145 60f7a26e0bcc0e87d76c97e2df7ebe6a 263 PANTHER PTHR10992 1 262 3.2E-176 T 26-04-2016 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 PANTHER PTHR10516 130 161 8.7E-42 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 PANTHER PTHR10516 1 74 8.7E-42 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 PANTHER PTHR10516:SF316 130 161 8.7E-42 T 26-04-2016 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 PANTHER PTHR10516:SF316 1 74 8.7E-42 T 26-04-2016 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 Gene3D G3DSA:3.10.50.40 3 69 1.7E-18 T 26-04-2016 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 Gene3D G3DSA:3.10.50.40 123 143 1.7E-18 T 26-04-2016 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.5E-11 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS21465 419a6dbe0647294207db5eaf93dd90c3 161 SUPERFAMILY SSF54534 2 141 1.12E-36 T 26-04-2016 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 Gene3D G3DSA:1.20.1510.10 14 208 5.6E-44 T 26-04-2016 IPR027469 Cation efflux protein transmembrane domain PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 PANTHER PTHR11562:SF55 1 298 5.5E-110 T 26-04-2016 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 290 1.9E-65 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 SUPERFAMILY SSF160240 212 289 8.5E-21 T 26-04-2016 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 PANTHER PTHR11562 1 298 5.5E-110 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 Pfam PF01545 Cation efflux family 17 208 2.2E-37 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 Gene3D G3DSA:3.30.70.1350 209 290 5.0E-25 T 26-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 SUPERFAMILY SSF161111 9 209 9.29E-53 T 26-04-2016 PAM18_RS04965 8bd22bdee383c835875eb18aa7eb4670 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 2.3E-22 T 26-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 Pfam PF09339 IclR helix-turn-helix domain 35 86 2.1E-14 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:1.10.10.10 21 91 3.2E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 30 276 1.6E-101 T 26-04-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 PANTHER PTHR30136 9 277 9.6E-115 T 26-04-2016 PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF46785 34 105 4.76E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 SMART SM00346 33 121 3.0E-33 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 PANTHER PTHR30136:SF10 9 277 9.6E-115 T 26-04-2016 PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF55781 98 277 4.56E-49 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:3.30.450.40 99 277 1.4E-56 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS00785 f415c69555febf633db2d5733a5d776d 279 Pfam PF01614 Bacterial transcriptional regulator 151 275 3.0E-37 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF13745 HxxPF-repeated domain 370 463 5.5E-28 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095 689 1167 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095 3041 4020 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095 1527 2574 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095 3011 3024 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF47336 2511 2581 1.31E-17 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 1100 1264 1.22E-38 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00668 Condensation domain 2599 2896 8.6E-63 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00668 Condensation domain 1095 1384 1.0E-62 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00668 Condensation domain 1548 1838 9.7E-70 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00668 Condensation domain 52 346 2.8E-76 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00668 Condensation domain 3064 3353 3.4E-61 T 26-04-2016 IPR001242 Condensation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 3242 3483 2.78E-52 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 1997 2152 1.2E-49 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 3514 3670 9.7E-50 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 512 679 2.9E-52 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:1.10.1200.10 2523 2585 2.5E-25 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:1.10.1200.10 1006 1083 9.4E-28 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:1.10.1200.10 4049 4113 2.1E-24 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 235 504 2.33E-62 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF56801 474 1031 3.27E-167 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF47336 1010 1079 3.4E-19 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 3671 3823 5.4E-36 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 2153 2308 3.1E-33 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SMART SM00823 Phosphopantetheine attachment site 4049 4115 0.012 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SMART SM00823 Phosphopantetheine attachment site 2519 2587 0.024 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SMART SM00823 Phosphopantetheine attachment site 1018 1086 0.0012 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.30.300.30 2398 2522 3.2E-42 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.30.300.30 3924 4048 2.9E-43 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00501 AMP-binding enzyme 2003 2403 1.3E-82 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00501 AMP-binding enzyme 517 913 4.1E-101 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00501 AMP-binding enzyme 3522 3929 7.5E-92 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2144 2155 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3663 3674 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF56801 1960 2532 6.15E-150 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 2781 3038 1.45E-44 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2543 2558 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1042 1057 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4070 4085 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095:SF173 689 1167 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095:SF173 3041 4020 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095:SF173 1527 2574 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 PANTHER PTHR24095:SF173 3011 3024 0.0 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 1271 1518 4.56E-46 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 52 229 4.78E-53 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 2594 2794 6.11E-44 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 1547 1739 9.56E-43 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2023 2427 6.5E-121 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 937 7.1E-140 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3542 3953 4.6E-131 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00550 Phosphopantetheine attachment site 1020 1079 8.7E-15 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00550 Phosphopantetheine attachment site 2520 2580 5.3E-11 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF00550 Phosphopantetheine attachment site 4048 4107 9.4E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF56801 3485 4059 3.27E-156 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.40.50.980 680 825 1.4E-46 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:2.30.38.10 3838 3919 7.8E-25 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:2.30.38.10 826 902 9.7E-28 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:2.30.38.10 2313 2392 2.3E-21 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1388 1542 8.0E-51 T 26-04-2016 IPR010060 Non-ribosomal peptide synthase PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2901 3056 3.7E-45 T 26-04-2016 IPR010060 Non-ribosomal peptide synthase PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF47336 4038 4109 5.23E-18 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 1726 1965 1.67E-54 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 SUPERFAMILY SSF52777 3069 3239 1.56E-41 T 26-04-2016 PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 3937 4020 6.6E-14 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 2411 2493 5.0E-11 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 921 992 2.9E-12 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS13580 f372654d424183744d7daa6db3dc5743 4136 Gene3D G3DSA:3.30.300.30 907 1005 1.9E-33 T 26-04-2016 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 PANTHER PTHR10578:SF65 7 378 1.8E-163 T 26-04-2016 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 75.027 T 26-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.7E-125 T 26-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 Gene3D G3DSA:3.20.20.70 7 376 1.4E-133 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 PANTHER PTHR10578 7 378 1.8E-163 T 26-04-2016 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 26-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 SUPERFAMILY SSF51395 223 374 2.56E-98 T 26-04-2016 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 SUPERFAMILY SSF51395 7 193 2.56E-98 T 26-04-2016 PAM18_RS24985 72c69b8a89513a0de9813425ca444d65 381 PIRSF PIRSF000138 2 379 2.2E-122 T 26-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 PAM18_RS15475 49ffc92aa47dc131ff2236100529a6b0 333 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 318 1.8E-103 T 26-04-2016 IPR016833 Putative sodium bile acid cotransporter PAM18_RS15475 49ffc92aa47dc131ff2236100529a6b0 333 PANTHER PTHR18640:SF9 3 330 2.2E-123 T 26-04-2016 PAM18_RS15475 49ffc92aa47dc131ff2236100529a6b0 333 PANTHER PTHR18640 3 330 2.2E-123 T 26-04-2016 IPR016833 Putative sodium bile acid cotransporter PAM18_RS15475 49ffc92aa47dc131ff2236100529a6b0 333 PIRSF PIRSF026166 1 332 1.7E-142 T 26-04-2016 IPR016833 Putative sodium bile acid cotransporter PAM18_RS26285 4d4bee2c25ae8641d1fccf4bc7d57dee 324 PANTHER PTHR30269 77 320 6.7E-138 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS26285 4d4bee2c25ae8641d1fccf4bc7d57dee 324 Pfam PF01925 Sulfite exporter TauE/SafE 86 317 6.2E-36 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS26285 4d4bee2c25ae8641d1fccf4bc7d57dee 324 PANTHER PTHR30269:SF5 77 320 6.7E-138 T 26-04-2016 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 SMART SM00530 9 64 3.1E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 SUPERFAMILY SSF47413 3 69 5.07E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 SUPERFAMILY SSF51182 57 179 2.41E-27 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 PANTHER PTHR10245 4 183 9.3E-65 T 26-04-2016 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 PANTHER PTHR10245:SF53 4 183 9.3E-65 T 26-04-2016 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 Pfam PF13560 Helix-turn-helix domain 5 61 2.5E-8 T 26-04-2016 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 Gene3D G3DSA:2.60.120.10 60 181 3.5E-23 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 Gene3D G3DSA:1.10.260.40 5 59 4.3E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS23445 6f6c5b44fdea0177171d297f549e20e0 187 Pfam PF07883 Cupin domain 109 175 1.6E-17 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Pfam PF02817 e3 binding domain 112 145 7.0E-16 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF47005 105 150 1.7E-12 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 PANTHER PTHR23151 3 409 4.0E-236 T 26-04-2016 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 409 2.7E-188 T 26-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 2.9E-79 T 26-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:3.30.559.10 174 407 6.0E-90 T 26-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Pfam PF00364 Biotin-requiring enzyme 4 76 3.2E-19 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF52777 179 408 1.33E-86 T 26-04-2016 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 PANTHER PTHR23151:SF47 3 409 4.0E-236 T 26-04-2016 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 SUPERFAMILY SSF51230 1 96 6.41E-26 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:4.10.320.10 113 153 2.3E-19 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS17735 1160597cf794a7a400d4235626f4b653 409 Gene3D G3DSA:2.40.50.100 1 95 6.6E-27 T 26-04-2016 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF53383 94 465 1.53E-89 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:1.10.10.10 6 73 1.7E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 3.2E-19 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.90.1150.10 350 451 9.4E-7 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.40.640.10 140 349 3.9E-61 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00155 Aminotransferase class I and II 137 450 1.5E-28 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 PANTHER PTHR11751:SF314 88 467 2.8E-176 T 26-04-2016 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF46785 4 73 1.16E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 SMART SM00345 10 69 4.6E-22 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS10595 3c206f778e0dccbe6a3bb60e66eb0233 479 PANTHER PTHR11751 88 467 2.8E-176 T 26-04-2016 PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 SUPERFAMILY SSF51735 4 245 8.63E-66 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 Gene3D G3DSA:3.40.50.720 3 244 1.3E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PANTHER PTHR24322 9 139 2.0E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PANTHER PTHR24322 156 188 2.0E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 9.2E-52 T 26-04-2016 PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PANTHER PTHR24322:SF264 9 139 2.0E-87 T 26-04-2016 PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PANTHER PTHR24322:SF264 156 188 2.0E-87 T 26-04-2016 PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.2E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.2E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26930 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 Pfam PF05036 Sporulation related domain 463 535 2.7E-11 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 Gene3D G3DSA:3.40.50.300 52 166 1.3E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 PANTHER PTHR35894 10 247 1.0E-20 T 26-04-2016 PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 SUPERFAMILY SSF110997 462 526 9.42E-5 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 Pfam PF13401 AAA domain 49 171 1.6E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 PANTHER PTHR35894:SF1 10 247 1.0E-20 T 26-04-2016 PAM18_RS26350 89bcc63554aab9a381d7176e4c9b3371 549 SUPERFAMILY SSF52540 19 246 3.61E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 Pfam PF06029 AlkA N-terminal domain 9 126 8.8E-32 T 26-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 SUPERFAMILY SSF48150 117 291 2.79E-45 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 PANTHER PTHR10242:SF3 73 295 3.9E-117 T 26-04-2016 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 PANTHER PTHR10242:SF3 4 52 3.9E-117 T 26-04-2016 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 SUPERFAMILY SSF55945 9 107 1.88E-27 T 26-04-2016 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 Gene3D G3DSA:1.10.1670.10 246 293 4.3E-15 T 26-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 Gene3D G3DSA:1.10.340.30 127 243 3.7E-38 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 PANTHER PTHR10242 73 295 3.9E-117 T 26-04-2016 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 PANTHER PTHR10242 4 52 3.9E-117 T 26-04-2016 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 SMART SM01009 9 126 8.4E-49 T 26-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 SMART SM00478 136 295 2.6E-14 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 Gene3D G3DSA:3.30.310.20 10 126 1.1E-31 T 26-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PAM18_RS17225 50e9aa8b81bf73301b1dcefded552770 297 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 259 4.8E-8 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 PANTHER PTHR23150:SF19 214 396 1.5E-49 T 26-04-2016 PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 PANTHER PTHR23150:SF19 127 188 1.5E-49 T 26-04-2016 PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 Gene3D G3DSA:3.90.1580.10 99 363 1.2E-32 T 26-04-2016 IPR005532 Sulfatase-modifying factor enzyme PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 SUPERFAMILY SSF56436 127 186 2.59E-27 T 26-04-2016 IPR016187 C-type lectin fold PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 SUPERFAMILY SSF56436 214 360 2.59E-27 T 26-04-2016 IPR016187 C-type lectin fold PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 PANTHER PTHR23150 214 396 1.5E-49 T 26-04-2016 PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 PANTHER PTHR23150 127 188 1.5E-49 T 26-04-2016 PAM18_RS00365 3d6a61c4751d178f3ef6c5614f3645bd 570 Pfam PF03781 Sulfatase-modifying factor enzyme 1 127 359 3.8E-30 T 26-04-2016 IPR005532 Sulfatase-modifying factor enzyme PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 PANTHER PTHR13774:SF22 1 281 1.3E-177 T 26-04-2016 PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 Gene3D G3DSA:3.10.310.10 125 267 2.5E-37 T 26-04-2016 PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 SUPERFAMILY SSF54506 1 280 1.34E-50 T 26-04-2016 PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 PANTHER PTHR13774 1 281 1.3E-177 T 26-04-2016 PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 Gene3D G3DSA:3.10.310.10 4 124 5.1E-29 T 26-04-2016 PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 PIRSF PIRSF016184 1 282 1.5E-82 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 276 1.8E-37 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS24695 f2eb713ead21054c07a2c5d6603bbb4f 284 Pfam PF02567 Phenazine biosynthesis-like protein 8 270 5.9E-32 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.3E-29 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:1.10.10.250 73 141 8.9E-30 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:3.30.1550.10 2 72 5.0E-38 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 5.0E-16 T 26-04-2016 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 26-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.661 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 PANTHER PTHR11661 1 142 5.0E-73 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 SMART SM00649 9 141 5.8E-83 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 26-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.2E-23 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF54747 3 72 7.46E-30 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal PAM18_RS03370 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF46906 68 141 9.68E-24 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS26205 806938d5a64d72c7530c73628df9e804 244 SUPERFAMILY SSF56112 35 181 1.64E-18 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26205 806938d5a64d72c7530c73628df9e804 244 Gene3D G3DSA:1.10.510.10 122 163 1.1E-5 T 26-04-2016 PAM18_RS26205 806938d5a64d72c7530c73628df9e804 244 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 154 166 - T 26-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PAM18_RS26205 806938d5a64d72c7530c73628df9e804 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 42 211 1.4E-17 T 26-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PAM18_RS26205 806938d5a64d72c7530c73628df9e804 244 Gene3D G3DSA:3.90.1200.10 164 240 2.5E-4 T 26-04-2016 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 PIRSF PIRSF000443 2 379 1.9E-132 T 26-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 PANTHER PTHR32268 1 377 8.0E-193 T 26-04-2016 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 Pfam PF00561 alpha/beta hydrolase fold 51 360 1.2E-31 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 PANTHER PTHR32268:SF11 1 377 8.0E-193 T 26-04-2016 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 8 376 50.562 T 26-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 370 1.1E-136 T 26-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 Gene3D G3DSA:3.40.50.1820 240 360 2.6E-34 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 Gene3D G3DSA:3.40.50.1820 35 208 2.6E-34 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01970 49d5076b27c73e65b1996471f8c543ca 379 SUPERFAMILY SSF53474 13 375 9.76E-101 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 4.4E-51 T 26-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 PANTHER PTHR10000:SF17 39 213 2.7E-108 T 26-04-2016 PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 PANTHER PTHR10000 39 213 2.7E-108 T 26-04-2016 PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 5.9E-41 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 4.3E-36 T 26-04-2016 PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 Gene3D G3DSA:3.40.50.1000 81 217 3.5E-47 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 SUPERFAMILY SSF56784 2 205 9.55E-30 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS19865 92dccb3025d4f480ea352fc44f6b79d2 217 Gene3D G3DSA:1.20.1440.100 15 80 1.2E-21 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 Gene3D G3DSA:2.40.170.20 171 746 1.3E-119 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 746 2.6E-102 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 PANTHER PTHR30069 339 641 0.0 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 PANTHER PTHR30069 1 284 0.0 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 Gene3D G3DSA:2.170.130.10 54 170 2.5E-36 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 Pfam PF00593 TonB dependent receptor 465 744 3.5E-34 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 SUPERFAMILY SSF56935 39 746 6.11E-133 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 PANTHER PTHR30069:SF5 339 641 0.0 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 PANTHER PTHR30069:SF5 1 284 0.0 T 26-04-2016 PAM18_RS11740 e78a328d98809ff93d05c2c05df6abf6 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 2.3E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS26195 fe19d9413c35ae720be4f17e5b9def35 492 SUPERFAMILY SSF56112 289 460 2.08E-11 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26195 fe19d9413c35ae720be4f17e5b9def35 492 SUPERFAMILY SSF56112 49 176 2.63E-13 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26195 fe19d9413c35ae720be4f17e5b9def35 492 Gene3D G3DSA:1.10.510.10 407 467 1.9E-4 T 26-04-2016 PAM18_RS26195 fe19d9413c35ae720be4f17e5b9def35 492 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 322 449 3.7E-9 T 26-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 Gene3D G3DSA:3.40.1280.10 1 151 3.0E-67 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 150 7.9E-58 T 26-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 SUPERFAMILY SSF75217 1 150 6.28E-47 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 PANTHER PTHR12029:SF31 1 152 3.4E-74 T 26-04-2016 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 PIRSF PIRSF029256 1 153 7.8E-68 T 26-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.084 T 26-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 PANTHER PTHR12029 1 152 3.4E-74 T 26-04-2016 PAM18_RS26795 0d26ddbf160e9ff4f27229a4c2067250 153 Pfam PF00588 SpoU rRNA Methylase family 2 142 3.2E-32 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PRINTS PR01270 Histone deacetylase superfamily signature 190 205 9.2E-14 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PRINTS PR01270 Histone deacetylase superfamily signature 276 286 9.2E-14 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PRINTS PR01270 Histone deacetylase superfamily signature 157 180 9.2E-14 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 SUPERFAMILY SSF52768 2 343 2.06E-87 T 26-04-2016 PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PANTHER PTHR10625:SF121 4 75 4.9E-106 T 26-04-2016 PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PANTHER PTHR10625:SF121 101 338 4.9E-106 T 26-04-2016 PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PANTHER PTHR10625 4 75 4.9E-106 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 PANTHER PTHR10625 101 338 4.9E-106 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 Pfam PF00850 Histone deacetylase domain 29 338 5.0E-63 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS19035 3a1d20a59309369b608aa896827911ce 346 Gene3D G3DSA:3.40.800.20 4 340 9.4E-74 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 SUPERFAMILY SSF81665 249 334 7.19E-12 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 SUPERFAMILY SSF81665 100 151 7.19E-12 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 342 348 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 Pfam PF00122 E1-E2 ATPase 119 331 6.6E-59 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 543 4.7E-28 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PANTHER PTHR24093:SF126 64 611 3.9E-129 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PANTHER PTHR24093 64 611 3.9E-129 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 212 8.2E-17 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 8.2E-17 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 466 8.2E-17 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 8.2E-17 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 340 354 8.2E-17 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 98 639 6.4E-151 T 26-04-2016 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 Gene3D G3DSA:2.70.150.10 103 249 1.2E-22 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 98 637 2.2E-161 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 122 612 1.9E-59 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 Gene3D G3DSA:3.40.50.1000 447 602 4.2E-33 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 SUPERFAMILY SSF56784 395 634 1.46E-40 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 SUPERFAMILY SSF56784 339 358 1.46E-40 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS13375 bda2387dfe57c4dd23ce970153c17add 660 SUPERFAMILY SSF81653 155 248 2.75E-22 T 26-04-2016 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 PANTHER PTHR11680 8 416 0.0 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.90.1150.10 285 416 3.7E-55 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 Pfam PF00464 Serine hydroxymethyltransferase 9 385 9.1E-183 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 PIRSF PIRSF000412 2 417 4.1E-168 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.40.640.10 37 284 3.3E-108 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 53.164 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 SUPERFAMILY SSF53383 6 416 4.13E-182 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 26-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS24000 41419f0a17d2118e5154ebe144f75cad 417 PANTHER PTHR11680:SF9 8 416 0.0 T 26-04-2016 PAM18_RS19300 3ae4b53df71179301cbe83b5b6918dc8 214 PANTHER PTHR30614 1 214 4.0E-63 T 26-04-2016 PAM18_RS19300 3ae4b53df71179301cbe83b5b6918dc8 214 SUPERFAMILY SSF161098 14 198 4.45E-38 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19300 3ae4b53df71179301cbe83b5b6918dc8 214 Gene3D G3DSA:1.10.3720.10 14 213 1.3E-36 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19300 3ae4b53df71179301cbe83b5b6918dc8 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 6.2E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19300 3ae4b53df71179301cbe83b5b6918dc8 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 1.0E-14 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 187 1.4E-10 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 Gene3D G3DSA:1.10.357.10 5 192 1.6E-42 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 PANTHER PTHR30055:SF20 1 194 3.2E-104 T 26-04-2016 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 PANTHER PTHR30055 1 194 3.2E-104 T 26-04-2016 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.0E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.0E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 SUPERFAMILY SSF48498 81 192 6.82E-26 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 SUPERFAMILY SSF46689 2 73 1.74E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14580 59a2bab0b66d444845a9ec4b1ca979f4 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 9.9E-13 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 SMART SM00116 262 310 1.6E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 SMART SM00116 321 367 3.2 T 26-04-2016 IPR000644 CBS domain PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 SUPERFAMILY SSF52540 1 245 4.7E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 Gene3D G3DSA:3.10.580.10 253 367 5.5E-21 T 26-04-2016 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 SUPERFAMILY SSF54631 253 367 6.13E-20 T 26-04-2016 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 PANTHER PTHR24220 3 293 9.2E-159 T 26-04-2016 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 Pfam PF00571 CBS domain 260 307 1.4E-8 T 26-04-2016 IPR000644 CBS domain PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 Pfam PF00571 CBS domain 321 367 0.0065 T 26-04-2016 IPR000644 CBS domain PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 3.4E-104 T 26-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 Pfam PF00005 ABC transporter 23 168 9.6E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 PANTHER PTHR24220:SF350 3 293 9.2E-159 T 26-04-2016 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 SMART SM00382 31 226 1.3E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS05330 7d163fc840b29b73161c94688df2ce16 387 Gene3D G3DSA:3.40.50.300 1 240 3.2E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 Gene3D G3DSA:3.65.10.10 223 418 5.1E-59 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 PANTHER PTHR21090 1 421 1.5E-209 T 26-04-2016 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 Gene3D G3DSA:3.65.10.10 21 222 1.4E-66 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 3.4E-178 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 9.1E-120 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 47.985 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23200 5844cacb395467d5072a23979152e9d9 421 SUPERFAMILY SSF55205 1 419 3.27E-142 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 Gene3D G3DSA:2.30.110.10 1 205 1.1E-73 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 PANTHER PTHR35802 2 211 3.3E-70 T 26-04-2016 PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 PANTHER PTHR35802:SF1 2 211 3.3E-70 T 26-04-2016 PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 SUPERFAMILY SSF50475 9 192 7.07E-39 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 Pfam PF04299 Putative FMN-binding domain 1 168 2.1E-64 T 26-04-2016 IPR007396 Transcriptional regulator PAI 2-type PAM18_RS03860 8e709741cf86d254f0f8ecd72db7db3c 212 PIRSF PIRSF010372 1 212 3.1E-83 T 26-04-2016 IPR007396 Transcriptional regulator PAI 2-type PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 6.7E-51 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 Gene3D G3DSA:3.40.190.10 124 231 8.8E-32 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 PANTHER PTHR30085 7 302 1.1E-140 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 PANTHER PTHR30085:SF2 7 302 1.1E-140 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 SUPERFAMILY SSF53850 8 272 6.73E-64 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 Gene3D G3DSA:3.40.190.10 232 273 1.3E-27 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 Gene3D G3DSA:3.40.190.10 35 123 1.3E-27 T 26-04-2016 PAM18_RS18235 8a34d8624a78e4ae114fa0bff19a31ff 302 SMART SM00062 38 271 9.3E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 Gene3D G3DSA:3.40.718.10 13 418 3.7E-165 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835:SF52 3 166 2.3E-242 T 26-04-2016 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835:SF52 190 257 2.3E-242 T 26-04-2016 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835:SF52 277 418 2.3E-242 T 26-04-2016 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835 3 166 2.3E-242 T 26-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835 190 257 2.3E-242 T 26-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 PANTHER PTHR11835 277 418 2.3E-242 T 26-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 26-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 SUPERFAMILY SSF53659 4 418 2.11E-147 T 26-04-2016 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 SMART SM01329 30 414 1.7E-180 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 4.4E-225 T 26-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PAM18_RS12080 828a72de93b4d9b6c49651aa56dd5585 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 413 3.1E-117 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SMART SM00279 170 205 6.1E-12 T 26-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Pfam PF01612 3'-5' exonuclease 313 501 1.0E-36 T 26-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SUPERFAMILY SSF47807 168 288 1.14E-28 T 26-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PANTHER PTHR10133:SF27 1 912 0.0 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 9.1E-51 T 26-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 TIGRFAM TIGR00593 pola: DNA polymerase I 6 913 2.2E-282 T 26-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Pfam PF00476 DNA polymerase family A 539 911 1.0E-153 T 26-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 ProSitePatterns PS00447 DNA polymerase family A signature. 739 758 - T 26-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SMART SM00475 4 266 2.6E-114 T 26-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:3.40.50.1010 5 183 1.7E-66 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:1.10.150.20 697 803 1.2E-35 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:1.10.150.20 184 251 3.4E-23 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:3.30.420.10 309 526 4.5E-83 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SMART SM00482 671 877 8.4E-119 T 26-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SUPERFAMILY SSF88723 5 167 2.44E-52 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PANTHER PTHR10133 1 912 0.0 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:3.30.70.370 649 696 1.4E-68 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:3.30.70.370 804 913 1.4E-68 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SMART SM00474 312 501 2.9E-36 T 26-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SUPERFAMILY SSF53098 311 501 1.4E-54 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 SUPERFAMILY SSF56672 506 913 1.45E-160 T 26-04-2016 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 798 809 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 728 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 830 846 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 678 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 873 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 662 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 764 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 685 708 1.0E-77 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 269 6.4E-27 T 26-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 PAM18_RS28695 4af02bed95d5e8aad76c889a69fa3597 913 Gene3D G3DSA:1.20.1060.10 527 648 1.0E-34 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 88 175 2.4E-33 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 176 266 3.5E-32 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 PANTHER PTHR30346 1 294 1.1E-159 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:1.10.10.10 1 79 3.1E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF03466 LysR substrate binding domain 87 291 1.8E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF46785 1 80 2.42E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF53850 88 293 2.31E-42 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 PANTHER PTHR30346:SF4 1 294 1.1E-159 T 26-04-2016 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07160 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 SUPERFAMILY SSF143548 17 154 6.8E-45 T 26-04-2016 IPR029009 Allosteric substrate binding domain PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 PANTHER PTHR30182:SF1 1 454 5.2E-246 T 26-04-2016 PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03313 Serine dehydratase alpha chain 186 452 1.8E-104 T 26-04-2016 IPR005130 Serine dehydratase-like, alpha subunit PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 454 3.7E-210 T 26-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 PANTHER PTHR30182 1 454 5.2E-246 T 26-04-2016 PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03315 Serine dehydratase beta chain 4 154 9.1E-55 T 26-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PAM18_RS28115 5e0eb206c11c55b7000149bf29b48664 458 Gene3D G3DSA:3.30.1330.90 11 156 4.0E-51 T 26-04-2016 IPR029009 Allosteric substrate binding domain PAM18_RS09330 58333ee0854c1cc24f6daa8eab1ae6c8 293 Pfam PF00953 Glycosyl transferase family 4 24 180 1.1E-30 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS09330 58333ee0854c1cc24f6daa8eab1ae6c8 293 PANTHER PTHR22926 2 274 8.2E-47 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS09330 58333ee0854c1cc24f6daa8eab1ae6c8 293 PANTHER PTHR22926:SF3 2 274 8.2E-47 T 26-04-2016 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 PANTHER PTHR30514 1 250 5.7E-116 T 26-04-2016 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 SUPERFAMILY SSF46689 2 78 3.05E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 74 3.9E-12 T 26-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 PANTHER PTHR30514:SF4 1 250 5.7E-116 T 26-04-2016 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 Gene3D G3DSA:1.10.10.10 2 76 1.6E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 Gene3D G3DSA:3.40.50.10490 103 264 1.9E-10 T 26-04-2016 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 SUPERFAMILY SSF53697 97 266 1.82E-16 T 26-04-2016 PAM18_RS28760 a1929cc88c713ad1720a5ce92a8705d9 285 Pfam PF01380 SIS domain 135 253 1.9E-12 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS02900 da2023007442b078d348514df85c7843 373 Pfam PF02661 Fic/DOC family 114 227 2.6E-15 T 26-04-2016 IPR003812 Fido domain PAM18_RS02900 da2023007442b078d348514df85c7843 373 SUPERFAMILY SSF46785 273 370 1.51E-6 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02900 da2023007442b078d348514df85c7843 373 Gene3D G3DSA:1.10.10.10 290 361 2.1E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02900 da2023007442b078d348514df85c7843 373 PANTHER PTHR13504 1 373 1.9E-214 T 26-04-2016 PAM18_RS02900 da2023007442b078d348514df85c7843 373 SUPERFAMILY SSF140931 101 297 4.19E-36 T 26-04-2016 IPR003812 Fido domain PAM18_RS02900 da2023007442b078d348514df85c7843 373 PANTHER PTHR13504:SF33 1 373 1.9E-214 T 26-04-2016 PAM18_RS02900 da2023007442b078d348514df85c7843 373 Pfam PF13776 Domain of unknown function (DUF4172) 6 87 1.6E-32 T 26-04-2016 IPR025230 Domain of unknown function DUF4172 PAM18_RS02900 da2023007442b078d348514df85c7843 373 Gene3D G3DSA:1.10.3290.10 26 289 2.3E-61 T 26-04-2016 IPR003812 Fido domain PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PANTHER PTHR24322 9 172 1.1E-76 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 232 1.7E-50 T 26-04-2016 PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 SUPERFAMILY SSF51735 4 235 6.13E-70 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 Gene3D G3DSA:3.40.50.720 5 234 1.5E-70 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 3.5E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 3.5E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 3.5E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 171 0.0024 T 26-04-2016 PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PANTHER PTHR24322:SF459 9 172 1.1E-76 T 26-04-2016 PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03960 8bfa4146a0217477f8e2c936628d1342 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 SUPERFAMILY SSF46689 191 236 1.34E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 Pfam PF02311 AraC-like ligand binding domain 44 153 1.8E-20 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 SUPERFAMILY SSF51215 29 174 1.83E-29 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 Pfam PF12833 Helix-turn-helix domain 211 289 1.2E-16 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 PANTHER PTHR11019 51 292 4.5E-32 T 26-04-2016 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.6E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.6E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 SMART SM00342 205 288 6.2E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 Gene3D G3DSA:1.10.10.60 191 241 5.0E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 SUPERFAMILY SSF46689 242 289 4.93E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 Gene3D G3DSA:1.10.10.60 242 289 3.7E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS21905 6dc476f89742711ed62fbe2baca5a382 293 Gene3D G3DSA:2.60.120.280 29 174 1.1E-28 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 Gene3D G3DSA:3.40.50.300 205 366 7.7E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 Pfam PF00270 DEAD/DEAH box helicase 28 195 1.5E-47 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 SMART SM00487 23 220 4.4E-59 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 PANTHER PTHR24031:SF180 4 436 9.9E-269 T 26-04-2016 PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 Gene3D G3DSA:3.40.50.300 3 204 4.5E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 SUPERFAMILY SSF52540 72 357 2.68E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 SMART SM00490 256 337 1.2E-27 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 PANTHER PTHR24031 4 436 9.9E-269 T 26-04-2016 PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 Pfam PF03880 DbpA RNA binding domain 386 456 5.7E-24 T 26-04-2016 IPR005580 DbpA, RNA-binding domain PAM18_RS02295 c60dbb85cde05626b9196ae30e1a04dd 458 Pfam PF00271 Helicase conserved C-terminal domain 230 337 5.0E-25 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 SUPERFAMILY SSF56954 57 468 1.26E-120 T 26-04-2016 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 SUPERFAMILY SSF56954 1 30 1.26E-120 T 26-04-2016 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 PANTHER PTHR30203 3 468 3.4E-205 T 26-04-2016 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 Gene3D G3DSA:1.20.1600.10 55 471 3.9E-129 T 26-04-2016 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 66 256 7.6E-28 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 284 464 4.1E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 PANTHER PTHR30203:SF15 3 468 3.4E-205 T 26-04-2016 PAM18_RS02160 06ca28c3693c98048920910b0f18fa9d 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 466 7.5E-173 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS18325 d32539a9b1a8f230dc3439ec131b5319 170 Gene3D G3DSA:2.60.40.10 106 133 7.2E-7 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS18325 d32539a9b1a8f230dc3439ec131b5319 170 SUPERFAMILY SSF117074 12 169 1.7E-35 T 26-04-2016 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-32 T 26-04-2016 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 SMART SM00862 145 216 3.1E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:1.10.10.10 125 217 3.3E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 PANTHER PTHR26402:SF399 1 220 3.8E-94 T 26-04-2016 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 SUPERFAMILY SSF52172 1 172 1.66E-34 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 6.7E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 PANTHER PTHR26402 1 220 3.8E-94 T 26-04-2016 PAM18_RS13185 c053b38d1f115f3328baab9f35400217 226 SMART SM00448 1 112 2.1E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 PANTHER PTHR33121 461 713 1.9E-81 T 26-04-2016 PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 202 263 1.0E-6 T 26-04-2016 IPR005330 MHYT domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 132 184 7.3E-15 T 26-04-2016 IPR005330 MHYT domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Pfam PF03707 Bacterial signalling protein N terminal repeat 69 125 2.0E-16 T 26-04-2016 IPR005330 MHYT domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Gene3D G3DSA:3.20.20.450 461 711 3.2E-98 T 26-04-2016 IPR001633 EAL domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 284 446 7.4E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 SUPERFAMILY SSF55073 293 449 3.34E-47 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 SMART SM00267 277 448 6.8E-56 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 PANTHER PTHR33121:SF13 461 713 1.9E-81 T 26-04-2016 PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 SMART SM00052 458 704 1.9E-110 T 26-04-2016 IPR001633 EAL domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 SUPERFAMILY SSF141868 463 712 4.45E-88 T 26-04-2016 IPR001633 EAL domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Pfam PF00563 EAL domain 464 699 9.0E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Gene3D G3DSA:3.30.70.270 290 452 1.5E-53 T 26-04-2016 PAM18_RS08495 6e34ebc5fcd4711817b561ff430cef92 726 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 444 1.1E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS23440 676138584417851341a9de009348cad0 405 Gene3D G3DSA:3.90.230.10 171 394 8.3E-63 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS23440 676138584417851341a9de009348cad0 405 SUPERFAMILY SSF55920 136 393 3.79E-69 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS23440 676138584417851341a9de009348cad0 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 169 4.3E-23 T 26-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 PAM18_RS23440 676138584417851341a9de009348cad0 405 SUPERFAMILY SSF53092 15 169 7.32E-26 T 26-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PAM18_RS23440 676138584417851341a9de009348cad0 405 PANTHER PTHR10804:SF86 7 21 4.4E-74 T 26-04-2016 PAM18_RS23440 676138584417851341a9de009348cad0 405 PANTHER PTHR10804:SF86 151 392 4.4E-74 T 26-04-2016 PAM18_RS23440 676138584417851341a9de009348cad0 405 Pfam PF00557 Metallopeptidase family M24 178 384 1.5E-50 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS23440 676138584417851341a9de009348cad0 405 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 330 342 - T 26-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PAM18_RS23440 676138584417851341a9de009348cad0 405 Gene3D G3DSA:3.40.350.10 15 168 1.4E-23 T 26-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PAM18_RS23440 676138584417851341a9de009348cad0 405 PANTHER PTHR10804 7 21 4.4E-74 T 26-04-2016 PAM18_RS23440 676138584417851341a9de009348cad0 405 PANTHER PTHR10804 151 392 4.4E-74 T 26-04-2016 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 Gene3D G3DSA:3.40.192.10 1 106 9.6E-36 T 26-04-2016 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 271 2.7E-76 T 26-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 31.426 T 26-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 5.0E-24 T 26-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 SUPERFAMILY SSF51735 101 270 1.25E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 SUPERFAMILY SSF53223 1 100 1.09E-30 T 26-04-2016 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 Gene3D G3DSA:3.40.50.720 107 245 2.6E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 165 4.2E-7 T 26-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 PANTHER PTHR21089 1 272 6.4E-152 T 26-04-2016 PAM18_RS00125 aa0ec858a934808afe2a29fe350fd450 274 PANTHER PTHR21089:SF2 1 272 6.4E-152 T 26-04-2016 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 316 6.9E-78 T 26-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 Gene3D G3DSA:3.10.290.10 21 98 1.5E-6 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 PANTHER PTHR11079:SF84 4 318 1.7E-146 T 26-04-2016 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 SMART SM00363 23 82 4.4E-7 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 Pfam PF01479 S4 domain 23 69 3.0E-9 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55174 22 73 3.34E-8 T 26-04-2016 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55120 91 317 3.68E-59 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 Pfam PF00849 RNA pseudouridylate synthase 104 253 5.5E-31 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS10200 efca1fcab08f17c163428cb281547324 318 PANTHER PTHR11079 4 318 1.7E-146 T 26-04-2016 PAM18_RS13745 f1008dbadef2f68194df5d5e7d887963 597 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 9 593 7.3E-183 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS13745 f1008dbadef2f68194df5d5e7d887963 597 PANTHER PTHR35370 6 597 0.0 T 26-04-2016 PAM18_RS13745 f1008dbadef2f68194df5d5e7d887963 597 PANTHER PTHR35370:SF1 6 597 0.0 T 26-04-2016 PAM18_RS13745 f1008dbadef2f68194df5d5e7d887963 597 PIRSF PIRSF028304 5 596 6.6E-187 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS13745 f1008dbadef2f68194df5d5e7d887963 597 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 10 593 1.6E-185 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 Gene3D G3DSA:1.10.8.300 223 330 1.4E-32 T 26-04-2016 PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 PANTHER PTHR11603:SF149 7 335 2.1E-193 T 26-04-2016 PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 PIRSF PIRSF002849 1 335 1.4E-129 T 26-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 PANTHER PTHR11603 7 335 2.1E-193 T 26-04-2016 PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 Gene3D G3DSA:3.40.50.300 38 202 7.2E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 SUPERFAMILY SSF52540 24 307 3.13E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 SMART SM00382 53 194 3.4E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS22550 ec4c6bb7522ffd88908cd2fe8d19dfa9 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 186 8.5E-64 T 26-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031 624 669 9.3E-128 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031 259 282 9.3E-128 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031 299 600 9.3E-128 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 3.5E-223 T 26-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 SUPERFAMILY SSF50249 7 172 1.25E-35 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Pfam PF00271 Helicase conserved C-terminal domain 478 586 1.8E-17 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Gene3D G3DSA:3.40.50.300 254 452 6.8E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Pfam PF17191 RecG wedge domain 11 170 3.9E-15 T 26-04-2016 IPR033454 RecG, wedge domain PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Gene3D G3DSA:2.40.50.140 45 138 3.6E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Gene3D G3DSA:3.40.50.300 453 636 4.8E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 SUPERFAMILY SSF52540 317 598 3.02E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 SMART SM00490 503 587 1.1E-21 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Gene3D G3DSA:1.10.150.20 4 35 6.8E-5 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 Pfam PF00270 DEAD/DEAH box helicase 293 430 8.1E-18 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 SMART SM00487 265 458 5.7E-26 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031:SF249 624 669 9.3E-128 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031:SF249 259 282 9.3E-128 T 26-04-2016 PAM18_RS27920 d9358e62309230cd6cc284482dcdb7c9 691 PANTHER PTHR24031:SF249 299 600 9.3E-128 T 26-04-2016 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 492 6.2E-266 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 494 2.0E-232 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 PANTHER PTHR13847 1 447 3.7E-225 T 26-04-2016 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 SUPERFAMILY SSF51905 8 275 1.53E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 5 494 54.133 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 PANTHER PTHR13847:SF214 1 447 3.7E-225 T 26-04-2016 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 Gene3D G3DSA:3.50.50.60 7 75 2.3E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24205 19bc0097a190a0ef2bff8b8b21058ee5 507 Gene3D G3DSA:3.50.50.60 150 332 2.3E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 243 2.3E-97 T 26-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 PANTHER PTHR11904 5 244 4.3E-87 T 26-04-2016 IPR001369 PNP/MTAP phosphorylase PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 Pfam PF01048 Phosphorylase superfamily 4 243 1.3E-42 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 245 34.098 T 26-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 PANTHER PTHR11904:SF1 5 244 4.3E-87 T 26-04-2016 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 50 90 - T 26-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 Gene3D G3DSA:3.40.50.1580 4 243 3.2E-74 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS10050 ae4a6f095aa5cd74db630046e2ebf75d 245 SUPERFAMILY SSF53167 4 243 4.03E-78 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 SUPERFAMILY SSF55821 1 204 3.05E-63 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.8E-62 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 PANTHER PTHR17490 1 206 9.5E-97 T 26-04-2016 PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 PANTHER PTHR17490:SF7 1 206 9.5E-97 T 26-04-2016 PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 Pfam PF01300 Telomere recombination 23 198 3.0E-44 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 PAM18_RS09085 545fc42df5c159a7e61ee90a3a9b6bf2 209 Gene3D G3DSA:3.90.870.10 2 202 1.4E-61 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 PANTHER PTHR11659 2 481 2.9E-257 T 26-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 26-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 479 1.9E-171 T 26-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 Pfam PF02637 GatB domain 328 479 1.3E-52 T 26-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 SUPERFAMILY SSF89095 297 402 2.22E-35 T 26-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 SMART SM00845 328 479 3.7E-79 T 26-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 Pfam PF02934 GatB/GatE catalytic domain 5 288 1.6E-111 T 26-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 PANTHER PTHR11659:SF0 2 481 2.9E-257 T 26-04-2016 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 SUPERFAMILY SSF55931 4 296 6.08E-120 T 26-04-2016 PAM18_RS23370 f98d7db6723f83a703279dca4a1c18cb 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 480 38.682 T 26-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 SUPERFAMILY SSF143456 7 189 6.28E-62 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 PANTHER PTHR30327:SF1 6 189 1.9E-68 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 189 37.087 T 26-04-2016 IPR003774 Protein of unknown function UPF0301 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 Gene3D G3DSA:3.30.70.1300 47 132 4.0E-23 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 PANTHER PTHR30327 6 189 1.9E-68 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 Gene3D G3DSA:3.40.1740.10 4 46 3.5E-34 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 Gene3D G3DSA:3.40.1740.10 133 179 3.5E-34 T 26-04-2016 PAM18_RS02050 740a268897a9c64e22688265a59172b3 189 Pfam PF02622 Uncharacterized ACR, COG1678 18 176 7.2E-48 T 26-04-2016 IPR003774 Protein of unknown function UPF0301 PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 SUPERFAMILY SSF69118 4 127 2.64E-38 T 26-04-2016 IPR029032 AhpD-like PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 Gene3D G3DSA:1.20.1290.10 4 129 9.7E-27 T 26-04-2016 IPR029032 AhpD-like PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 124 3.9E-59 T 26-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 PANTHER PTHR33570 1 129 1.1E-67 T 26-04-2016 PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 PANTHER PTHR33570:SF2 1 129 1.1E-67 T 26-04-2016 PAM18_RS01150 624ed817f14cdeb5df6accf94e82eacc 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 3.8E-24 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 55.903 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 6 110 2.2E-44 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 PIRSF PIRSF000497 1 394 1.3E-167 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 392 9.0E-182 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 12 134 7.3E-46 T 26-04-2016 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 26-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 234 395 3.26E-67 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 112 233 8.24E-50 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 26-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 3.8E-42 T 26-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 135 234 7.4E-40 T 26-04-2016 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 4.8E-40 T 26-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 PANTHER PTHR11964 7 389 1.1E-260 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 245 394 3.2E-69 T 26-04-2016 PAM18_RS02765 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 367 1.4E-66 T 26-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 PAM18_RS20110 ba2eebbafed23a51cf8dbb3eb86f3c6e 97 Pfam PF05400 Flagellar protein FliT 18 93 4.6E-7 T 26-04-2016 IPR008622 Flagellar protein FliT PAM18_RS28700 f46ab47ac7bf29bf4033db4061a33638 96 Pfam PF11191 Protein of unknown function (DUF2782) 22 96 7.3E-24 T 26-04-2016 IPR021357 Protein of unknown function DUF2782 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 Gene3D G3DSA:3.20.20.140 54 380 1.1E-79 T 26-04-2016 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 Pfam PF01979 Amidohydrolase family 48 428 1.8E-36 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 SUPERFAMILY SSF51556 50 374 5.3E-73 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 452 1.3E-217 T 26-04-2016 IPR010252 Formiminoglutamate deiminase PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 Gene3D G3DSA:2.30.40.10 381 440 4.0E-6 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 SUPERFAMILY SSF51338 359 436 2.27E-13 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 PANTHER PTHR11271 15 453 3.1E-222 T 26-04-2016 PAM18_RS26690 259bae5567b5bf46e61452deeb49ab30 453 PANTHER PTHR11271:SF4 15 453 3.1E-222 T 26-04-2016 IPR010252 Formiminoglutamate deiminase PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 SUPERFAMILY SSF89796 6 399 7.59E-135 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 PANTHER PTHR24023:SF593 75 386 2.0E-31 T 26-04-2016 PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 PANTHER PTHR24023 75 386 2.0E-31 T 26-04-2016 PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 Gene3D G3DSA:3.40.50.10540 309 399 3.4E-109 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 Gene3D G3DSA:3.40.50.10540 4 219 3.4E-109 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 Gene3D G3DSA:3.30.1540.10 226 308 2.4E-24 T 26-04-2016 PAM18_RS06145 764978b08d0116f95b1c04249edf0efa 399 Pfam PF02515 CoA-transferase family III 8 376 2.1E-121 T 26-04-2016 IPR003673 CoA-transferase family III GO:0003824 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 PANTHER PTHR18919 1 401 4.8E-256 T 26-04-2016 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 SUPERFAMILY SSF53901 277 400 3.12E-45 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 1.0E-138 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 6.7E-43 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 SUPERFAMILY SSF53901 4 276 4.51E-88 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 PANTHER PTHR18919:SF91 1 401 4.8E-256 T 26-04-2016 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 8.3E-224 T 26-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 PIRSF PIRSF000429 1 401 4.0E-136 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 153 200 3.2E-59 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 283 400 3.2E-59 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 201 282 4.6E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Gene3D G3DSA:3.40.47.10 4 126 4.6E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01130 9cec82d316b7c22b870c24f522b83ed0 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 4.6E-79 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 SUPERFAMILY SSF53807 29 287 6.28E-38 T 26-04-2016 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 PANTHER PTHR30532 29 301 3.6E-129 T 26-04-2016 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 29 148 1.9E-15 T 26-04-2016 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 PANTHER PTHR30532:SF2 29 301 3.6E-129 T 26-04-2016 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 149 300 7.3E-26 T 26-04-2016 PAM18_RS03975 df436de628992cb39e7d59055c89c197 301 Pfam PF01497 Periplasmic binding protein 33 280 7.3E-42 T 26-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 SUPERFAMILY SSF53590 39 348 8.5E-98 T 26-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 339 1.6E-71 T 26-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 PANTHER PTHR12304 7 349 3.5E-185 T 26-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 45 55 - T 26-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 PANTHER PTHR12304:SF19 7 349 3.5E-185 T 26-04-2016 PAM18_RS00725 a68c74435751b273b4589235c6ca257a 350 Gene3D G3DSA:3.90.245.10 39 348 4.2E-104 T 26-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PAM18_RS26155 a38cb7edbe096798f6721f32d25879c8 216 SUPERFAMILY SSF56112 15 157 3.24E-16 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 PANTHER PTHR10909:SF305 5 375 5.5E-174 T 26-04-2016 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 1.8E-37 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.5E-51 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:1.20.140.10 216 375 2.3E-69 T 26-04-2016 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 SUPERFAMILY SSF56645 5 240 1.18E-84 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 3.0E-27 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:2.40.110.10 119 215 5.1E-41 T 26-04-2016 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 Gene3D G3DSA:1.10.540.10 5 116 1.5E-40 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 SUPERFAMILY SSF47203 225 375 6.93E-58 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12815 b6ffbafa1970a9fe1756e8517278f1cc 375 PANTHER PTHR10909 5 375 5.5E-174 T 26-04-2016 PAM18_RS19170 5916de0f970728f78572bf3a8f2fc527 245 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 243 1.2E-40 T 26-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19170 5916de0f970728f78572bf3a8f2fc527 245 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 245 49.342 T 26-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19170 5916de0f970728f78572bf3a8f2fc527 245 Pfam PF02654 Cobalamin-5-phosphate synthase 11 241 3.0E-52 T 26-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19170 5916de0f970728f78572bf3a8f2fc527 245 PANTHER PTHR34148 1 245 5.9E-58 T 26-04-2016 PAM18_RS19170 5916de0f970728f78572bf3a8f2fc527 245 PANTHER PTHR34148:SF1 1 245 5.9E-58 T 26-04-2016 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 SUPERFAMILY SSF103473 18 395 2.22E-49 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 PANTHER PTHR23517 1 394 2.6E-66 T 26-04-2016 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 PANTHER PTHR23517:SF3 1 394 2.6E-66 T 26-04-2016 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 Pfam PF07690 Major Facilitator Superfamily 22 356 7.7E-32 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 Gene3D G3DSA:1.20.1250.20 219 396 3.4E-16 T 26-04-2016 PAM18_RS19530 c8f9628fb18d6ef318d0f8480136775f 409 Gene3D G3DSA:1.20.1250.20 19 195 7.2E-24 T 26-04-2016 PAM18_RS00340 428a56282d04345de3fa5a5e2386d93c 180 Gene3D G3DSA:2.160.10.10 3 172 7.2E-44 T 26-04-2016 PAM18_RS00340 428a56282d04345de3fa5a5e2386d93c 180 PANTHER PTHR13061 6 178 6.8E-74 T 26-04-2016 PAM18_RS00340 428a56282d04345de3fa5a5e2386d93c 180 SUPERFAMILY SSF51161 3 173 6.38E-44 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS00340 428a56282d04345de3fa5a5e2386d93c 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 2.9E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS00340 428a56282d04345de3fa5a5e2386d93c 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 1.2E-5 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 SUPERFAMILY SSF48452 284 447 5.79E-13 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 PANTHER PTHR22726 1 345 1.8E-126 T 26-04-2016 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Pfam PF14559 Tetratricopeptide repeat 282 336 3.5E-6 T 26-04-2016 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Pfam PF14559 Tetratricopeptide repeat 346 407 1.7E-6 T 26-04-2016 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 PANTHER PTHR22726:SF10 1 345 1.8E-126 T 26-04-2016 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Gene3D G3DSA:1.25.40.10 286 444 3.0E-15 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Gene3D G3DSA:3.30.2010.10 60 143 8.3E-18 T 26-04-2016 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Pfam PF01435 Peptidase family M48 67 250 4.8E-32 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS20640 c10417aa82497bfc81a4af77952e04e4 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 473 31.516 T 26-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 SUPERFAMILY SSF103481 193 295 4.71E-15 T 26-04-2016 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 Pfam PF00892 EamA-like transporter family 12 140 2.0E-15 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 Pfam PF00892 EamA-like transporter family 156 292 2.4E-21 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 PANTHER PTHR22911 8 299 2.8E-147 T 26-04-2016 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 PANTHER PTHR22911:SF63 8 299 2.8E-147 T 26-04-2016 PAM18_RS19025 ff802c0104b2d560916ef5276c2736e6 299 SUPERFAMILY SSF103481 46 144 1.01E-11 T 26-04-2016 PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.2E-63 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 PANTHER PTHR10285 8 197 1.0E-90 T 26-04-2016 PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.5E-88 T 26-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 SUPERFAMILY SSF53271 3 206 4.33E-65 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 26-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 PAM18_RS24235 cd465d9bd289757131db3d8f1377aadb 212 Gene3D G3DSA:3.40.50.2020 3 208 8.2E-72 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 PANTHER PTHR11699 1 480 2.6E-304 T 26-04-2016 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 3.3E-236 T 26-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.605.10 10 267 3.2E-106 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.309.10 268 453 1.3E-67 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 Pfam PF00171 Aldehyde dehydrogenase family 19 477 4.3E-173 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 SUPERFAMILY SSF53720 7 481 5.11E-175 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 PANTHER PTHR11699:SF49 1 480 2.6E-304 T 26-04-2016 PAM18_RS01325 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 PANTHER PTHR30419 1 299 7.5E-156 T 26-04-2016 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 SUPERFAMILY SSF53850 92 298 5.07E-28 T 26-04-2016 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 Gene3D G3DSA:1.10.10.10 4 85 2.8E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 Gene3D G3DSA:3.40.190.10 183 243 6.2E-7 T 26-04-2016 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 Gene3D G3DSA:3.40.190.10 90 182 1.8E-16 T 26-04-2016 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 PANTHER PTHR30419:SF7 1 299 7.5E-156 T 26-04-2016 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 4.9E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 SUPERFAMILY SSF46785 1 113 2.72E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13920 88d885686d25da1479f87a4c39dc0db8 303 Pfam PF03466 LysR substrate binding domain 90 298 2.1E-28 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS06760 ce2c1824a4ff1d1ba1784f1472c6193d 164 Pfam PF04447 Protein of unknown function (DUF550) 10 103 1.8E-38 T 26-04-2016 IPR007538 Domain of unknown function DUF550 PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PANTHER PTHR13078:SF55 20 296 7.9E-121 T 26-04-2016 PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 Gene3D G3DSA:3.40.50.720 7 254 7.7E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 6.5E-42 T 26-04-2016 PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 7.6E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 7.6E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 7.6E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 SUPERFAMILY SSF51735 7 253 2.15E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.6E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.6E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.6E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.6E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 205 4.1E-7 T 26-04-2016 PAM18_RS20535 ccfff6382e6618da8dbc5e27a6e585c7 305 PANTHER PTHR13078 20 296 7.9E-121 T 26-04-2016 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 Gene3D G3DSA:1.20.1250.20 22 231 5.7E-28 T 26-04-2016 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 Gene3D G3DSA:1.20.1250.20 232 429 7.6E-24 T 26-04-2016 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 415 4.3E-135 T 26-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 Pfam PF07690 Major Facilitator Superfamily 58 376 3.6E-30 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 SUPERFAMILY SSF103473 21 430 4.84E-70 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 PANTHER PTHR23508 12 432 2.5E-272 T 26-04-2016 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS28885 ef7ff4b6c107f2af303fe6e7547b6582 435 PANTHER PTHR23508:SF4 12 432 2.5E-272 T 26-04-2016 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.9E-29 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PANTHER PTHR11958:SF47 1 436 0.0 T 26-04-2016 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 Pfam PF00375 Sodium:dicarboxylate symporter family 11 403 9.1E-100 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 SUPERFAMILY SSF118215 11 404 2.09E-106 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 Gene3D G3DSA:1.10.3860.10 8 407 3.9E-104 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 PANTHER PTHR11958 1 436 0.0 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 26-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS00605 56cc220535a91f114800f8a1c4e45746 444 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 430 36.459 T 26-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Gene3D G3DSA:3.30.450.40 21 147 3.2E-6 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 SUPERFAMILY SSF55781 27 174 3.49E-8 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 SUPERFAMILY SSF46689 409 496 8.24E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Gene3D G3DSA:3.40.50.300 194 367 8.2E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Pfam PF02954 Bacterial regulatory protein, Fis family 454 493 7.4E-14 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 497 1.26E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 477 1.26E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Gene3D G3DSA:1.10.8.60 368 443 1.4E-17 T 26-04-2016 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Gene3D G3DSA:1.10.10.60 450 491 5.0E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 Pfam PF00158 Sigma-54 interaction domain 195 361 1.5E-69 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 SMART SM00382 215 358 1.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 SUPERFAMILY SSF52540 194 436 3.55E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 PANTHER PTHR32071:SF33 193 502 1.1E-155 T 26-04-2016 PAM18_RS17345 e3db94f3eabfc01bedc386b704a1a4d7 503 PANTHER PTHR32071 193 502 1.1E-155 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SMART SM00387 288 399 5.6E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 394 3.3E-19 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.6E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.6E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.6E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SUPERFAMILY SSF47384 163 245 1.04E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Pfam PF00072 Response regulator receiver domain 421 526 2.9E-7 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PANTHER PTHR24423 4 12 1.9E-81 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PANTHER PTHR24423 177 537 1.9E-81 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Gene3D G3DSA:3.40.50.2300 418 532 2.3E-15 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SUPERFAMILY SSF52172 417 532 1.85E-15 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Gene3D G3DSA:1.10.287.130 171 228 2.6E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Gene3D G3DSA:3.30.565.10 229 394 9.6E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SMART SM00448 419 526 2.5E-4 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SUPERFAMILY SSF55874 234 394 2.62E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 2.0E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PANTHER PTHR24423:SF439 4 12 1.9E-81 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 PANTHER PTHR24423:SF439 177 537 1.9E-81 T 26-04-2016 PAM18_RS19100 6a2aced3bd701d7c5bcb76c8e4f47cce 540 SMART SM00388 179 244 1.3E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 Gene3D G3DSA:2.40.170.20 376 660 1.5E-49 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 Gene3D G3DSA:2.40.170.20 159 332 1.5E-49 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 SUPERFAMILY SSF56935 367 664 4.27E-82 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 SUPERFAMILY SSF56935 37 309 4.27E-82 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 Pfam PF00593 TonB dependent receptor 458 641 2.2E-13 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 PANTHER PTHR32552:SF31 1 492 9.7E-272 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 PANTHER PTHR32552:SF31 512 679 9.7E-272 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 PANTHER PTHR32552 512 679 9.7E-272 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 PANTHER PTHR32552 1 492 9.7E-272 T 26-04-2016 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 5.5E-20 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS17600 cc930160f0d1fb40ba27ba989fe79151 702 Gene3D G3DSA:2.170.130.10 36 158 1.3E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18300 2252dbe268b5343a1cbbb2ada78c019f 138 PANTHER PTHR34309 1 133 1.0E-37 T 26-04-2016 PAM18_RS18300 2252dbe268b5343a1cbbb2ada78c019f 138 PANTHER PTHR34309:SF1 1 133 1.0E-37 T 26-04-2016 PAM18_RS18300 2252dbe268b5343a1cbbb2ada78c019f 138 Pfam PF03928 Haem-degrading 5 131 3.4E-30 T 26-04-2016 IPR005624 Haem-degrading PAM18_RS18300 2252dbe268b5343a1cbbb2ada78c019f 138 SUPERFAMILY SSF143744 3 134 1.57E-34 T 26-04-2016 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 1.92E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 1.92E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 SUPERFAMILY SSF46689 271 321 2.33E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 PANTHER PTHR11019 62 319 1.1E-41 T 26-04-2016 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 PANTHER PTHR11019:SF50 62 319 1.1E-41 T 26-04-2016 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 SMART SM00342 234 319 1.5E-26 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 Gene3D G3DSA:1.10.10.60 221 269 2.1E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 Pfam PF14525 AraC-binding-like domain 23 194 6.6E-13 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 Gene3D G3DSA:1.10.10.60 270 320 5.1E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 315 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS04430 77074398497eef21e8f7e5b56e587d07 325 Pfam PF12833 Helix-turn-helix domain 240 320 1.5E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 Gene3D G3DSA:3.30.1200.10 3 90 1.4E-29 T 26-04-2016 IPR003746 Protein of unknown function DUF167 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 SMART SM01152 7 83 3.7E-38 T 26-04-2016 IPR003746 Protein of unknown function DUF167 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 PANTHER PTHR13420 11 85 6.5E-20 T 26-04-2016 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 SUPERFAMILY SSF69786 2 91 7.85E-30 T 26-04-2016 IPR003746 Protein of unknown function DUF167 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 89 1.9E-22 T 26-04-2016 IPR005228 Conserved hypothetical protein CHP00251 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 8.7E-26 T 26-04-2016 IPR003746 Protein of unknown function DUF167 PAM18_RS01980 6ce503c6ac32599d1a4b7ad08ecb5039 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.399 T 26-04-2016 IPR003746 Protein of unknown function DUF167 PAM18_RS08125 c262e2ba9ae710c86af2bfb531827c04 108 Pfam PF03869 Arc-like DNA binding domain 13 62 1.4E-28 T 26-04-2016 IPR005569 Arc-like DNA binding domain GO:0003677 PAM18_RS08125 c262e2ba9ae710c86af2bfb531827c04 108 Gene3D G3DSA:1.10.1220.10 13 64 8.2E-22 T 26-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PAM18_RS08125 c262e2ba9ae710c86af2bfb531827c04 108 SUPERFAMILY SSF47598 14 59 1.04E-13 T 26-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.7E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 Pfam PF03466 LysR substrate binding domain 87 292 3.6E-34 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 SUPERFAMILY SSF53850 89 296 1.52E-28 T 26-04-2016 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 SUPERFAMILY SSF46785 1 111 9.25E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 Gene3D G3DSA:3.40.190.10 92 175 5.1E-14 T 26-04-2016 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 PANTHER PTHR30427 1 299 3.6E-120 T 26-04-2016 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 Gene3D G3DSA:3.40.190.10 176 263 4.7E-10 T 26-04-2016 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 PANTHER PTHR30427:SF1 1 299 3.6E-120 T 26-04-2016 PAM18_RS26590 745c8dda17cd7bb020c3cb7a76bc9bb0 302 Gene3D G3DSA:1.10.10.10 1 86 1.2E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00382 112 333 2.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 2.6E-50 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM01086 317 412 8.9E-35 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 PANTHER PTHR11262 1 414 4.6E-252 T 26-04-2016 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:3.40.50.300 294 311 1.3E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:3.40.50.300 67 254 1.3E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:1.10.8.60 316 417 4.2E-39 T 26-04-2016 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF52540 65 403 3.57E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.0E-20 T 26-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 412 2.3E-207 T 26-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00994 13 52 2.5E-24 T 26-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.3E-16 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.844 T 26-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PAM18_RS16610 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF57716 14 49 1.14E-11 T 26-04-2016 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 Gene3D G3DSA:1.10.760.10 347 467 5.2E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 PANTHER PTHR30600 172 467 0.0 T 26-04-2016 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 PANTHER PTHR30600 22 144 0.0 T 26-04-2016 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 SUPERFAMILY SSF46626 345 467 1.83E-23 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 PANTHER PTHR30600:SF6 172 467 0.0 T 26-04-2016 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 PANTHER PTHR30600:SF6 22 144 0.0 T 26-04-2016 PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 SUPERFAMILY SSF48695 231 271 1.93E-5 T 26-04-2016 IPR011031 Multihaem cytochrome PAM18_RS09905 a4d26011565a3c2f7b9500561ae12942 467 SUPERFAMILY SSF48695 373 383 1.93E-5 T 26-04-2016 IPR011031 Multihaem cytochrome PAM18_RS08300 ed6897fc4fd5eedd322c6c544cab921b 256 Pfam PF13144 Chaperone for flagella basal body P-ring formation 57 254 1.5E-62 T 26-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PAM18_RS08300 ed6897fc4fd5eedd322c6c544cab921b 256 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 119 255 1.3E-39 T 26-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PAM18_RS08300 ed6897fc4fd5eedd322c6c544cab921b 256 PANTHER PTHR36307 28 256 2.6E-53 T 26-04-2016 PAM18_RS08300 ed6897fc4fd5eedd322c6c544cab921b 256 SMART SM00858 131 193 2.3E-9 T 26-04-2016 IPR013974 SAF domain PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 SUPERFAMILY SSF51735 125 299 2.24E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 Gene3D G3DSA:3.90.180.10 2 141 1.7E-51 T 26-04-2016 IPR011032 GroES-like PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 5.6E-38 T 26-04-2016 PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 PANTHER PTHR11695:SF595 24 334 3.8E-128 T 26-04-2016 PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 Gene3D G3DSA:3.40.50.720 142 302 6.7E-70 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 Pfam PF00107 Zinc-binding dehydrogenase 159 292 1.0E-20 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 SUPERFAMILY SSF50129 5 144 4.71E-37 T 26-04-2016 IPR011032 GroES-like PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 SMART SM00829 20 332 2.5E-6 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS17420 3d04ee04008895751bb3cbc2a26e069a 334 PANTHER PTHR11695 24 334 3.8E-128 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 PANTHER PTHR10422:SF23 23 160 7.7E-93 T 26-04-2016 PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 SUPERFAMILY SSF46626 16 196 2.89E-30 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 Gene3D G3DSA:1.10.760.10 16 196 1.1E-38 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 4 180 1.6E-83 T 26-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 PANTHER PTHR10422 23 160 7.7E-93 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17905 d4b8a3af608a783d401b19832b7d3c21 203 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 179 4.6E-86 T 26-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO PAM18_RS18470 220eb0e1eaf35874070a37a0f35fb6c7 97 PANTHER PTHR38109 4 97 4.4E-42 T 26-04-2016 PAM18_RS18470 220eb0e1eaf35874070a37a0f35fb6c7 97 Hamap MF_01866 Protein YcgL [ycgL]. 3 90 26.105 T 26-04-2016 IPR027354 YcgL domain PAM18_RS18470 220eb0e1eaf35874070a37a0f35fb6c7 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 78 1.0E-37 T 26-04-2016 IPR027354 YcgL domain PAM18_RS18470 220eb0e1eaf35874070a37a0f35fb6c7 97 Pfam PF05166 YcgL domain 5 77 6.4E-32 T 26-04-2016 IPR027354 YcgL domain PAM18_RS18470 220eb0e1eaf35874070a37a0f35fb6c7 97 SUPERFAMILY SSF160191 2 94 3.01E-36 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 SUPERFAMILY SSF51735 951 1053 2.82E-28 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 SUPERFAMILY SSF51735 1089 1245 2.82E-28 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606:SF1 15 151 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606:SF1 219 566 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606:SF1 1128 1373 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606:SF1 675 1103 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606 15 151 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606 219 566 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606 1128 1373 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PANTHER PTHR11606 675 1103 0.0 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 SUPERFAMILY SSF53223 761 962 5.18E-27 T 26-04-2016 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 PIRSF PIRSF036761 2 1614 0.0 T 26-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 Gene3D G3DSA:3.40.50.720 1114 1238 1.0E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 Gene3D G3DSA:3.40.50.720 948 1059 1.0E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09740 7b07caa19b1259c679bab989af1a9d9d 1620 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1607 0.0 T 26-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.970 340 500 1.8E-32 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF02780 Transketolase, C-terminal domain 500 616 3.7E-27 T 26-04-2016 IPR033248 Transketolase, C-terminal domain PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 ProSitePatterns PS00802 Transketolase signature 2. 430 446 - T 26-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52518 15 206 7.41E-77 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52518 250 386 7.41E-77 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52518 321 508 1.23E-56 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 SUPERFAMILY SSF52922 496 625 2.62E-33 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 PANTHER PTHR11624:SF20 31 225 0.0 T 26-04-2016 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 PANTHER PTHR11624:SF20 248 627 0.0 T 26-04-2016 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 SMART SM00861 324 488 8.8E-63 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.970 249 339 8.0E-75 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.970 33 208 8.0E-75 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Gene3D G3DSA:3.40.50.920 501 624 1.8E-36 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 624 2.0E-266 T 26-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 PANTHER PTHR11624 31 225 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 PANTHER PTHR11624 248 627 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 625 46.223 T 26-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 5.5E-121 T 26-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS04560 95205bc345d880a4f5a4a56c126d2d11 627 Pfam PF02779 Transketolase, pyrimidine binding domain 325 485 1.7E-37 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS28990 a3d17e34b93738c1df197bcd636c7c9d 476 Gene3D G3DSA:1.10.630.10 103 472 1.1E-22 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS28990 a3d17e34b93738c1df197bcd636c7c9d 476 Pfam PF00067 Cytochrome P450 194 449 8.1E-8 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS28990 a3d17e34b93738c1df197bcd636c7c9d 476 SUPERFAMILY SSF48264 104 469 8.91E-23 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 PIRSF PIRSF036389 4 769 1.4E-281 T 26-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Gene3D G3DSA:3.90.1170.50 193 309 2.4E-21 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Gene3D G3DSA:3.30.365.10 59 187 6.3E-38 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 332 614 6.0E-28 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 627 709 7.5E-15 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 60 191 8.1E-17 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 SUPERFAMILY SSF56003 12 256 5.93E-47 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 SUPERFAMILY SSF56003 334 762 2.36E-111 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 SMART SM01008 223 312 7.8E-24 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 PANTHER PTHR11908 63 765 4.4E-253 T 26-04-2016 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 PANTHER PTHR11908:SF2 63 765 4.4E-253 T 26-04-2016 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Gene3D G3DSA:3.30.365.10 541 762 9.6E-43 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 36 2.4E-5 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAM18_RS13695 3f75b94f94721cf82e3b41c1f028a73b 771 Gene3D G3DSA:3.30.365.10 339 455 1.0E-28 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS10745 79be35d0603771bc2ffbdaf24609f353 119 Pfam PF06127 Protein of unknown function (DUF962) 11 85 1.4E-7 T 26-04-2016 IPR009305 Protein of unknown function DUF962 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 3.6E-78 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:1.10.286.10 3 50 7.4E-22 T 26-04-2016 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 PANTHER PTHR11109 2 181 1.5E-116 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:3.30.1130.10 53 181 6.1E-63 T 26-04-2016 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 SUPERFAMILY SSF55620 3 181 4.74E-79 T 26-04-2016 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 37.02 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS17290 34e6fa3509af1020796fbc27caf66f39 181 Pfam PF01227 GTP cyclohydrolase I 4 180 1.9E-76 T 26-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 SUPERFAMILY SSF51905 2 319 5.37E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PANTHER PTHR22912:SF180 206 315 9.1E-20 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PANTHER PTHR22912:SF180 3 190 9.1E-20 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 341 6.6E-60 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 Gene3D G3DSA:3.50.50.60 2 119 1.0E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PANTHER PTHR22912 206 315 9.1E-20 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PANTHER PTHR22912 3 190 9.1E-20 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.8E-7 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.8E-7 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.8E-7 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 Gene3D G3DSA:3.50.50.60 120 348 7.2E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 1.9E-14 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.9E-14 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.9E-14 T 26-04-2016 PAM18_RS23650 19910400c95e32f29ceda1ad238b4262 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.9E-14 T 26-04-2016 PAM18_RS19465 253ec437ee7d34d863ab67ee7b43d4e0 208 PANTHER PTHR10204 1 187 2.2E-79 T 26-04-2016 PAM18_RS19465 253ec437ee7d34d863ab67ee7b43d4e0 208 PANTHER PTHR10204:SF0 1 187 2.2E-79 T 26-04-2016 PAM18_RS19465 253ec437ee7d34d863ab67ee7b43d4e0 208 SUPERFAMILY SSF52218 1 192 1.13E-50 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS19465 253ec437ee7d34d863ab67ee7b43d4e0 208 Gene3D G3DSA:3.40.50.360 1 192 3.1E-46 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS19465 253ec437ee7d34d863ab67ee7b43d4e0 208 Pfam PF02525 Flavodoxin-like fold 1 182 1.5E-43 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 Gene3D G3DSA:3.40.50.450 3 184 2.4E-70 T 26-04-2016 PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 1.4E-63 T 26-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 PANTHER PTHR31223 2 195 1.1E-97 T 26-04-2016 PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 PANTHER PTHR31223:SF0 2 195 1.1E-97 T 26-04-2016 PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 Pfam PF03641 Possible lysine decarboxylase 48 177 5.2E-42 T 26-04-2016 IPR031100 LOG family PAM18_RS25760 16c2a339cd88bd5e0d59862771a709e1 195 SUPERFAMILY SSF102405 2 180 3.82E-64 T 26-04-2016 PAM18_RS07265 f21a02637524229fe4004312376d3a70 65 SUPERFAMILY SSF55008 2 64 2.62E-16 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS07265 f21a02637524229fe4004312376d3a70 65 Gene3D G3DSA:3.30.70.100 2 63 1.1E-19 T 26-04-2016 PAM18_RS07265 f21a02637524229fe4004312376d3a70 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 26-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PAM18_RS07265 f21a02637524229fe4004312376d3a70 65 Pfam PF00403 Heavy-metal-associated domain 3 60 8.5E-13 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS13775 f8aecbe66db7da583e9d40ff408fcdbe 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 7 412 6.8E-76 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS13775 f8aecbe66db7da583e9d40ff408fcdbe 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 386 5.8E-34 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS13775 f8aecbe66db7da583e9d40ff408fcdbe 443 PANTHER PTHR35566:SF1 2 443 1.8E-144 T 26-04-2016 PAM18_RS13775 f8aecbe66db7da583e9d40ff408fcdbe 443 PANTHER PTHR35566 2 443 1.8E-144 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SUPERFAMILY SSF55781 195 335 3.05E-19 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00086 418 460 8.1E-7 T 26-04-2016 IPR001610 PAC motif PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Pfam PF13426 PAS domain 358 459 1.4E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Pfam PF01590 GAF domain 193 332 3.2E-13 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Gene3D G3DSA:3.20.20.450 643 887 4.0E-102 T 26-04-2016 IPR001633 EAL domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SUPERFAMILY SSF55785 352 458 3.22E-22 T 26-04-2016 IPR000014 PAS domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 467 628 2.2E-35 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799 502 719 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799 858 877 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799 125 151 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00052 639 885 2.7E-123 T 26-04-2016 IPR001633 EAL domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00065 192 343 5.2E-9 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00267 460 629 1.7E-56 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SUPERFAMILY SSF55073 476 630 1.1E-43 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00091 346 412 3.8E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SMART SM00091 24 87 59.0 T 26-04-2016 IPR000014 PAS domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Gene3D G3DSA:3.30.450.40 168 338 2.8E-18 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Gene3D G3DSA:3.30.70.270 472 635 4.2E-49 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 624 1.5E-39 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 346 466 1.1E-17 T 26-04-2016 IPR000014 PAS domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799:SF710 502 719 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799:SF710 858 877 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 PANTHER PTHR10799:SF710 125 151 3.9E-96 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Pfam PF00563 EAL domain 645 880 2.9E-78 T 26-04-2016 IPR001633 EAL domain PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 Gene3D G3DSA:3.30.450.20 347 458 1.2E-21 T 26-04-2016 PAM18_RS26250 5dbb740b1fd5fa97052365755732027c 899 SUPERFAMILY SSF141868 644 892 8.11E-92 T 26-04-2016 IPR001633 EAL domain PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 PANTHER PTHR19836 1 101 7.9E-59 T 26-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.573 T 26-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 SUPERFAMILY SSF57716 2 101 1.14E-37 T 26-04-2016 PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 26-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 26-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS03490 5795d52f7430457cc585af753fe24d1a 101 Gene3D G3DSA:4.10.830.10 41 101 2.0E-29 T 26-04-2016 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 Pfam PF03562 MltA specific insert domain 55 280 3.1E-76 T 26-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 PANTHER PTHR30124:SF0 3 384 5.0E-152 T 26-04-2016 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 PIRSF PIRSF019422 4 383 1.2E-118 T 26-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 Pfam PF06725 3D domain 303 375 1.2E-23 T 26-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 SMART SM00925 126 281 7.9E-86 T 26-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 Gene3D G3DSA:2.40.40.10 192 380 1.8E-54 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 Gene3D G3DSA:2.40.40.10 39 185 3.1E-25 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 PANTHER PTHR30124 3 384 5.0E-152 T 26-04-2016 PAM18_RS19480 ae18b710583427bf729be14b1db7bb5f 385 SUPERFAMILY SSF50685 41 380 2.3E-125 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 88 182 5.1E-18 T 26-04-2016 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 PANTHER PTHR30126:SF8 1 285 2.3E-183 T 26-04-2016 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 183 263 8.9E-10 T 26-04-2016 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF03466 LysR substrate binding domain 87 274 2.1E-37 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:1.10.10.10 1 83 4.7E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF53850 87 273 3.44E-31 T 26-04-2016 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF46785 1 110 8.44E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.0E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12195 d6ba28f06de4da46cfcf983b701104a9 298 PANTHER PTHR30126 1 285 2.3E-183 T 26-04-2016 PAM18_RS13755 3e07f7a4078a9fabab8089875016bf61 165 PANTHER PTHR36152:SF2 1 165 1.7E-100 T 26-04-2016 PAM18_RS13755 3e07f7a4078a9fabab8089875016bf61 165 Pfam PF05638 Type VI secretion system effector, Hcp 11 138 5.6E-29 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS13755 3e07f7a4078a9fabab8089875016bf61 165 Gene3D G3DSA:2.30.110.20 11 162 1.1E-46 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS13755 3e07f7a4078a9fabab8089875016bf61 165 SUPERFAMILY SSF141452 10 162 4.05E-42 T 26-04-2016 IPR008514 Type VI secretion system effector, Hcp PAM18_RS13755 3e07f7a4078a9fabab8089875016bf61 165 PANTHER PTHR36152 1 165 1.7E-100 T 26-04-2016 PAM18_RS29135 73999ace9103bfc393ed7ded1cd38916 131 Gene3D G3DSA:3.40.50.1010 28 105 5.6E-18 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS29135 73999ace9103bfc393ed7ded1cd38916 131 Pfam PF01936 NYN domain 28 90 5.1E-10 T 26-04-2016 IPR021139 NYN domain, limkain-b1-type PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 Gene3D G3DSA:1.25.40.10 131 188 5.6E-9 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 PANTHER PTHR12558:SF12 132 357 2.2E-57 T 26-04-2016 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 1.5E-30 T 26-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 PANTHER PTHR12558 132 357 2.2E-57 T 26-04-2016 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 SMART SM00028 221 254 17.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 SMART SM00028 150 183 0.49 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 SUPERFAMILY SSF48452 142 284 1.3E-13 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS18675 c9ab80dabec896711f5be410668abafa 407 Gene3D G3DSA:1.25.40.10 189 272 5.9E-29 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS22085 f2b2f0d2def925a1b26499e1c34c0e5e 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 1.8E-39 T 26-04-2016 IPR018654 Putative toxin of bacterial toxin-antitoxin pair PAM18_RS22085 f2b2f0d2def925a1b26499e1c34c0e5e 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.003 T 26-04-2016 IPR018654 Putative toxin of bacterial toxin-antitoxin pair PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 SUPERFAMILY SSF47240 2 199 4.06E-76 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 PIRSF PIRSF020736 1 200 1.6E-90 T 26-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 PANTHER PTHR42637 1 203 6.4E-95 T 26-04-2016 PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 PANTHER PTHR42637:SF1 1 203 6.4E-95 T 26-04-2016 PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 1 51 8.3E-18 T 26-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 53 195 9.4E-70 T 26-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 PAM18_RS16700 7ea0df7ef646d169488b20d3ba77d18e 203 Gene3D G3DSA:1.20.1260.10 3 200 1.4E-85 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 44.769 T 26-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.5E-33 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 PANTHER PTHR22993:SF15 1 270 1.2E-130 T 26-04-2016 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF46946 131 222 1.09E-27 T 26-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.0E-23 T 26-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Gene3D G3DSA:3.20.190.10 2 130 1.7E-38 T 26-04-2016 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.1E-91 T 26-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 SMART SM01232 130 222 6.8E-46 T 26-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF57716 218 269 1.17E-16 T 26-04-2016 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 PANTHER PTHR22993 1 270 1.2E-130 T 26-04-2016 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 SUPERFAMILY SSF81624 2 135 1.15E-40 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 5.7E-9 T 26-04-2016 IPR010663 Zinc finger, FPG/IleRS-type PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 Gene3D G3DSA:1.10.8.50 131 270 2.3E-47 T 26-04-2016 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 26-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PAM18_RS01800 e454116f66a25fd6e3c6691e7bcb9837 270 SMART SM00898 2 116 1.5E-55 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 PANTHER PTHR11807 6 262 3.1E-117 T 26-04-2016 PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 SUPERFAMILY SSF52402 10 228 2.07E-56 T 26-04-2016 PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 1 264 58.223 T 26-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 PIRSF PIRSF004976 3 267 4.9E-71 T 26-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 Gene3D G3DSA:3.40.50.620 20 199 9.2E-22 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 Pfam PF01171 PP-loop family 34 197 6.9E-14 T 26-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PAM18_RS19630 17665b5952033ddb053bb6446723774e 274 PANTHER PTHR11807:SF16 6 262 3.1E-117 T 26-04-2016 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:2.40.30.10 286 367 5.2E-30 T 26-04-2016 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 12 363 5.4E-139 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 364 40.523 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:3.40.50.620 8 216 3.5E-97 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 SUPERFAMILY SSF52402 11 248 9.7E-57 T 26-04-2016 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 PANTHER PTHR11933 1 366 9.7E-214 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:2.30.30.280 217 284 9.7E-33 T 26-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 PANTHER PTHR11933:SF10 1 366 9.7E-214 T 26-04-2016 PAM18_RS12065 f94ed94035e97b67731049f7ef0eab6a 375 Pfam PF03054 tRNA methyl transferase 12 363 1.7E-136 T 26-04-2016 PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 PANTHER PTHR22617:SF35 38 262 3.9E-98 T 26-04-2016 PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 PANTHER PTHR22617 38 262 3.9E-98 T 26-04-2016 PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 Gene3D G3DSA:1.10.287.500 76 202 4.6E-48 T 26-04-2016 PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 SUPERFAMILY SSF75708 38 261 1.18E-61 T 26-04-2016 PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 PIRSF PIRSF002884 26 262 2.9E-94 T 26-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PAM18_RS18800 83d5dbc190d12218af8c67335fa64e60 262 Pfam PF04344 Chemotaxis phosphatase, CheZ 50 262 3.7E-75 T 26-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- PAM18_RS08615 5ae9abf26758c8261f38cc2318af8deb 156 PANTHER PTHR11080 1 155 5.7E-45 T 26-04-2016 PAM18_RS08615 5ae9abf26758c8261f38cc2318af8deb 156 Gene3D G3DSA:3.40.50.850 1 155 7.0E-15 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS08615 5ae9abf26758c8261f38cc2318af8deb 156 PANTHER PTHR11080:SF17 1 155 5.7E-45 T 26-04-2016 PAM18_RS08615 5ae9abf26758c8261f38cc2318af8deb 156 Pfam PF00857 Isochorismatase family 61 151 4.4E-10 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS08615 5ae9abf26758c8261f38cc2318af8deb 156 SUPERFAMILY SSF52499 1 154 5.89E-21 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS23655 b4cbcc168fe6db84e9e0aa7589b95718 352 Pfam PF03969 AFG1-like ATPase 7 349 1.8E-136 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS23655 b4cbcc168fe6db84e9e0aa7589b95718 352 PANTHER PTHR12169:SF11 1 351 9.3E-164 T 26-04-2016 PAM18_RS23655 b4cbcc168fe6db84e9e0aa7589b95718 352 SUPERFAMILY SSF52540 43 170 4.67E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23655 b4cbcc168fe6db84e9e0aa7589b95718 352 PANTHER PTHR12169 1 351 9.3E-164 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS23655 b4cbcc168fe6db84e9e0aa7589b95718 352 Gene3D G3DSA:3.40.50.300 9 168 2.1E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 PANTHER PTHR22888:SF13 12 265 9.7E-156 T 26-04-2016 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 PANTHER PTHR22888 12 265 9.7E-156 T 26-04-2016 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 Gene3D G3DSA:2.60.40.420 113 276 6.1E-38 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 Gene3D G3DSA:1.10.287.90 26 112 6.7E-36 T 26-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 PIRSF PIRSF000292 1 310 2.3E-137 T 26-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 237 3.3E-117 T 26-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 SUPERFAMILY SSF81464 26 116 3.43E-23 T 26-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 Pfam PF06481 COX Aromatic Rich Motif 237 282 2.2E-15 T 26-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 SUPERFAMILY SSF49503 119 278 2.43E-49 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS18360 9db42d394cf820ff967f97c19aa20c8e 331 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 217 4.8E-7 T 26-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 Gene3D G3DSA:3.30.1330.60 90 207 6.4E-39 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 SUPERFAMILY SSF103088 78 207 1.44E-35 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 151 167 2.6E-17 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 105 127 2.6E-17 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 136 151 2.6E-17 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 Pfam PF00691 OmpA family 105 201 5.1E-24 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20445 8347a15af8bb9bcc94ca00029d781475 210 PANTHER PTHR30128 1 210 2.9E-50 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 772 789 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 Gene3D G3DSA:2.40.170.20 190 789 2.4E-85 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552:SF33 1 479 0.0 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552:SF33 495 654 0.0 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552:SF33 671 789 0.0 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 Gene3D G3DSA:2.170.130.10 51 189 2.8E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 180 3.7E-15 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 SUPERFAMILY SSF56935 52 789 1.14E-116 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552 1 479 0.0 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552 495 654 0.0 T 26-04-2016 PAM18_RS13915 1991ca2ab66b48d27397a43d898023dc 789 PANTHER PTHR32552 671 789 0.0 T 26-04-2016 PAM18_RS24265 ef8e2d9d8273690d4949d22c56c97df2 790 Pfam PF13953 PapC C-terminal domain 707 768 1.4E-14 T 26-04-2016 IPR025949 PapC-like, C-terminal domain PAM18_RS24265 ef8e2d9d8273690d4949d22c56c97df2 790 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 282 292 - T 26-04-2016 IPR018030 Fimbrial membrane usher, conserved site PAM18_RS24265 ef8e2d9d8273690d4949d22c56c97df2 790 PANTHER PTHR30451:SF5 49 786 0.0 T 26-04-2016 PAM18_RS24265 ef8e2d9d8273690d4949d22c56c97df2 790 PANTHER PTHR30451 49 786 0.0 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS24265 ef8e2d9d8273690d4949d22c56c97df2 790 Pfam PF00577 Outer membrane usher protein 266 691 1.9E-22 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS20465 194fbe1c7ab09b9701c02ecac6a11370 205 PANTHER PTHR30506 1 205 3.2E-134 T 26-04-2016 PAM18_RS20465 194fbe1c7ab09b9701c02ecac6a11370 205 PANTHER PTHR30506:SF2 1 205 3.2E-134 T 26-04-2016 PAM18_RS20465 194fbe1c7ab09b9701c02ecac6a11370 205 Pfam PF03458 UPF0126 domain 4 78 5.8E-20 T 26-04-2016 IPR005115 Uncharacterised domain UPF0126 PAM18_RS20465 194fbe1c7ab09b9701c02ecac6a11370 205 Pfam PF03458 UPF0126 domain 90 162 1.1E-21 T 26-04-2016 IPR005115 Uncharacterised domain UPF0126 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Pfam PF00072 Response regulator receiver domain 670 780 4.3E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SMART SM00387 530 645 1.2E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Pfam PF07696 7TMR-DISM extracellular 2 32 171 3.8E-36 T 26-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Gene3D G3DSA:1.10.287.130 410 477 3.1E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PANTHER PTHR24423 35 50 3.8E-225 T 26-04-2016 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PANTHER PTHR24423 397 791 3.8E-225 T 26-04-2016 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SUPERFAMILY SSF52172 667 785 1.05E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SMART SM00388 418 483 5.3E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.0E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.0E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.0E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.0E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SMART SM00448 668 781 5.5E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Gene3D G3DSA:3.40.50.2300 665 785 1.8E-42 T 26-04-2016 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PANTHER PTHR24423:SF559 35 50 3.8E-225 T 26-04-2016 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 PANTHER PTHR24423:SF559 397 791 3.8E-225 T 26-04-2016 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Gene3D G3DSA:3.30.565.10 487 647 7.5E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SUPERFAMILY SSF55874 472 642 2.62E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Pfam PF07695 7TM diverse intracellular signalling 184 386 3.2E-56 T 26-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 644 6.9E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 SUPERFAMILY SSF47384 404 484 1.12E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04905 6d322fc431c03c4903895e2c700cec99 795 Pfam PF00512 His Kinase A (phospho-acceptor) domain 419 482 1.6E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 8.2E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 PANTHER PTHR32552:SF32 671 851 0.0 T 26-04-2016 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 PANTHER PTHR32552:SF32 56 653 0.0 T 26-04-2016 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 SUPERFAMILY SSF56935 109 849 3.66E-90 T 26-04-2016 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 130 849 5.6E-129 T 26-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 Gene3D G3DSA:2.170.130.10 137 239 2.1E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 235 1.5E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 SMART SM00965 55 105 1.0E-11 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 Gene3D G3DSA:2.40.170.20 240 848 7.3E-68 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 PANTHER PTHR32552 671 851 0.0 T 26-04-2016 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 PANTHER PTHR32552 56 653 0.0 T 26-04-2016 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 127 848 1.1E-107 T 26-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS18435 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF00593 TonB dependent receptor 564 848 3.3E-20 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 Pfam PF00072 Response regulator receiver domain 181 300 8.4E-17 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 SMART SM00448 179 300 1.7E-18 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 SUPERFAMILY SSF52172 179 303 1.71E-24 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 PANTHER PTHR22617 1 169 8.9E-103 T 26-04-2016 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 PIRSF PIRSF002867 1 308 2.0E-108 T 26-04-2016 IPR024181 Chemotaxis response regulator CheV PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 Gene3D G3DSA:3.40.50.2300 179 302 6.2E-27 T 26-04-2016 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 Gene3D G3DSA:2.30.30.40 93 144 3.6E-5 T 26-04-2016 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 SUPERFAMILY SSF50341 16 156 5.75E-35 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 SMART SM00260 17 153 4.0E-20 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 PANTHER PTHR22617:SF30 1 169 8.9E-103 T 26-04-2016 PAM18_RS08305 8d801bd2aecfb27fe95fdc8e176bea49 310 Pfam PF01584 CheW-like domain 21 156 3.2E-34 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 Gene3D G3DSA:1.10.230.10 281 373 7.4E-42 T 26-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PANTHER PTHR11739 34 427 1.9E-208 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 219 234 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 379 393 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 296 316 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 359 375 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 241 269 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PRINTS PR00143 Citrate synthase signature 165 178 7.9E-57 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 26-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 PIRSF PIRSF001369 37 428 2.7E-180 T 26-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 3.6E-134 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 Gene3D G3DSA:1.10.580.10 52 280 7.6E-101 T 26-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 SUPERFAMILY SSF48256 6 427 6.54E-170 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS17765 4cf94dc018d59bb8e8d515eb802c7822 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 2.4E-239 T 26-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 PAM18_RS10535 0bba74556e809bd10ff276cd4515627d 242 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 233 5.8E-56 T 26-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PAM18_RS10535 0bba74556e809bd10ff276cd4515627d 242 PANTHER PTHR36925 1 242 8.4E-86 T 26-04-2016 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 1.3E-148 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PANTHER PTHR30330 1 449 4.1E-229 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PANTHER PTHR30330:SF3 1 449 4.1E-229 T 26-04-2016 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 214 233 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 309 327 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 186 204 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 412 432 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 PRINTS PR00175 Sodium/alanine symporter signature 93 115 1.8E-53 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS12915 abaef4753220bd396a5ccf13084d9c4f 449 Pfam PF01235 Sodium:alanine symporter family 56 447 1.5E-141 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 Gene3D G3DSA:3.40.50.2300 9 133 9.1E-21 T 26-04-2016 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00448 9 125 2.2E-12 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 PANTHER PTHR26402 9 209 5.4E-44 T 26-04-2016 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 PANTHER PTHR26402:SF598 9 209 5.4E-44 T 26-04-2016 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00421 151 208 1.2E-21 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00072 Response regulator receiver domain 11 125 3.6E-13 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.8E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.8E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.8E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF52172 9 131 9.68E-19 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 208 3.5E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 Gene3D G3DSA:1.10.10.10 144 212 6.1E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13705 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF46894 146 212 4.76E-19 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 Gene3D G3DSA:3.40.47.10 261 404 4.6E-49 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.1E-29 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 PANTHER PTHR11712 1 403 9.8E-168 T 26-04-2016 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 Gene3D G3DSA:3.40.47.10 6 257 5.2E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 SUPERFAMILY SSF53901 213 403 2.72E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 SUPERFAMILY SSF53901 1 251 1.58E-63 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 SMART SM00825 Beta-ketoacyl synthase 4 405 3.9E-13 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site PAM18_RS17620 c00d6cbbf2a5ea5b9552be84ba781273 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.1E-47 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 Pfam PF00311 Phosphoenolpyruvate carboxylase 131 878 2.4E-275 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 385 405 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 534 554 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 247 262 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 188 204 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 605 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 135 148 8.9E-69 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PANTHER PTHR30523 1 878 0.0 T 26-04-2016 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 Gene3D G3DSA:1.20.1440.90 275 388 1.7E-31 T 26-04-2016 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 SUPERFAMILY SSF51621 5 878 0.0 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 878 18.767 T 26-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 PANTHER PTHR30523:SF3 1 878 0.0 T 26-04-2016 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 536 548 - T 26-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS06375 12d0352d753cd1d9058e9f15719a0327 878 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 136 147 - T 26-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 6.5E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 PANTHER PTHR30055:SF34 1 196 4.5E-83 T 26-04-2016 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 Gene3D G3DSA:1.10.357.10 71 196 4.7E-40 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 PANTHER PTHR30055 1 196 4.5E-83 T 26-04-2016 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 SUPERFAMILY SSF46689 2 85 1.85E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 Gene3D G3DSA:1.10.10.60 2 67 8.4E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10425 32acaff80f1f9bd73b9ba48cf2358ad0 196 SUPERFAMILY SSF48498 81 196 6.81E-29 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 6.4E-28 T 26-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 Gene3D G3DSA:3.30.1070.10 34 83 1.2E-23 T 26-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 20.708 T 26-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 SUPERFAMILY SSF55229 33 83 2.48E-17 T 26-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 7.6E-38 T 26-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 PAM18_RS08855 b439e58b3085f44731df075cc5596b79 84 PANTHER PTHR33404 1 83 3.3E-32 T 26-04-2016 PAM18_RS27170 3b973cf4e9e0698567d7fb7d727f9106 166 Gene3D G3DSA:2.40.70.10 8 134 6.3E-42 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS27170 3b973cf4e9e0698567d7fb7d727f9106 166 PANTHER PTHR38037 4 156 6.3E-67 T 26-04-2016 PAM18_RS27170 3b973cf4e9e0698567d7fb7d727f9106 166 SUPERFAMILY SSF50630 9 143 9.64E-42 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS27170 3b973cf4e9e0698567d7fb7d727f9106 166 Pfam PF05618 Putative ATP-dependant zinc protease 9 146 5.1E-48 T 26-04-2016 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 SUPERFAMILY SSF58104 358 657 2.35E-66 T 26-04-2016 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 PANTHER PTHR32089 298 657 5.4E-104 T 26-04-2016 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 2.3E-6 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 423 452 2.3E-6 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 SMART SM00283 395 656 3.1E-60 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 Gene3D G3DSA:1.10.287.950 410 620 4.4E-54 T 26-04-2016 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 PANTHER PTHR32089:SF64 298 657 5.4E-104 T 26-04-2016 PAM18_RS25365 9e815dbaed49369d35261f84e9db775c 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 655 3.2E-45 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 4.4E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 4.4E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Gene3D G3DSA:1.10.8.60 319 366 2.0E-21 T 26-04-2016 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 PANTHER PTHR32071:SF11 5 441 4.5E-272 T 26-04-2016 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 SUPERFAMILY SSF52172 3 191 7.12E-44 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Pfam PF00072 Response regulator receiver domain 7 115 5.1E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Gene3D G3DSA:3.40.50.300 144 318 9.0E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 SMART SM00448 5 116 1.1E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Gene3D G3DSA:3.40.50.2300 3 128 1.8E-35 T 26-04-2016 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Gene3D G3DSA:1.10.10.60 367 441 6.1E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 PANTHER PTHR32071 5 441 4.5E-272 T 26-04-2016 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Pfam PF02954 Bacterial regulatory protein, Fis family 398 438 3.4E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 SUPERFAMILY SSF46689 358 440 5.82E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 SUPERFAMILY SSF52540 146 375 4.83E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 SMART SM00382 166 328 6.1E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18270 d680ecb33a7cfdae17dd6de70c573f63 441 Pfam PF00158 Sigma-54 interaction domain 146 312 2.8E-66 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 Gene3D G3DSA:1.20.1600.10 28 443 1.9E-83 T 26-04-2016 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 PANTHER PTHR30026 17 461 4.8E-141 T 26-04-2016 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 Pfam PF02321 Outer membrane efflux protein 244 437 1.4E-30 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 Pfam PF02321 Outer membrane efflux protein 36 217 2.0E-24 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 452 2.2E-140 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 PANTHER PTHR30026:SF3 17 461 4.8E-141 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS26025 db7be9ca466a8f4f5d8f5d1c0f0457ae 482 SUPERFAMILY SSF56954 32 451 2.88E-90 T 26-04-2016 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:3.30.420.140 330 454 1.3E-53 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SMART SM00732 329 428 4.2E-41 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:1.10.10.650 2 114 1.3E-44 T 26-04-2016 IPR023319 Tex-like protein, HTH domain PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SUPERFAMILY SSF158832 4 324 1.7E-116 T 26-04-2016 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SMART SM00316 653 724 1.6E-24 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 PANTHER PTHR10724 1 773 0.0 T 26-04-2016 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SUPERFAMILY SSF47781 564 636 1.78E-20 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Pfam PF12836 Helix-hairpin-helix motif 495 559 4.8E-29 T 26-04-2016 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:2.40.50.140 638 726 3.1E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:1.10.150.310 503 634 1.8E-46 T 26-04-2016 IPR023097 Tex RuvX-like domain PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Pfam PF16921 Tex protein YqgF-like domain 330 455 3.7E-53 T 26-04-2016 IPR032639 Tex protein, YqgF-like domain PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SUPERFAMILY SSF47781 474 560 4.45E-28 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:1.10.3500.10 455 502 1.6E-100 T 26-04-2016 IPR023323 Tex-like domain PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Gene3D G3DSA:1.10.3500.10 115 325 1.6E-100 T 26-04-2016 IPR023323 Tex-like domain PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Pfam PF09371 Tex-like protein N-terminal domain 20 197 9.0E-64 T 26-04-2016 IPR018974 Tex-like protein, N-terminal PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SUPERFAMILY SSF53098 325 473 4.32E-53 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 SUPERFAMILY SSF50249 642 729 1.64E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 Pfam PF00575 S1 RNA binding domain 653 724 2.5E-20 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS27195 cf5b5af3c48e70e8ad8d21572825fc7f 779 PANTHER PTHR10724:SF1 1 773 0.0 T 26-04-2016 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 4.9E-51 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 4.9E-51 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 4.9E-51 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 4.9E-51 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 4.9E-51 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.355 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 26-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PIRSF PIRSF001438 1 311 3.9E-120 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Gene3D G3DSA:3.40.190.10 111 199 5.3E-40 T 26-04-2016 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.5E-23 T 26-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Gene3D G3DSA:3.40.190.10 2 110 3.8E-48 T 26-04-2016 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 1.0E-77 T 26-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 Gene3D G3DSA:3.30.160.40 221 305 2.6E-29 T 26-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.5E-111 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 SUPERFAMILY SSF53850 4 219 9.19E-84 T 26-04-2016 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 PANTHER PTHR11557 4 307 4.4E-162 T 26-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27495 b971040e7a2cc86e732531daa7065258 313 SUPERFAMILY SSF54782 220 309 2.22E-28 T 26-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS21225 114de315493b7c26820e0a412f7939e2 331 PIRSF PIRSF006470 1 329 1.9E-124 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS21225 114de315493b7c26820e0a412f7939e2 331 PANTHER PTHR33376 1 329 4.3E-181 T 26-04-2016 PAM18_RS21225 114de315493b7c26820e0a412f7939e2 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 265 3.0E-74 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS21225 114de315493b7c26820e0a412f7939e2 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.7E-106 T 26-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PAM18_RS21225 114de315493b7c26820e0a412f7939e2 331 PANTHER PTHR33376:SF7 1 329 4.3E-181 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 725 58.964 T 26-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.20.25.10 810 867 2.1E-31 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 3.6E-37 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.6E-37 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.6E-37 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.6E-37 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 111 124 3.6E-37 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 625 2.4E-4 T 26-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 747 1.3E-11 T 26-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.40.50.140 1 168 1.3E-57 T 26-04-2016 IPR006171 Toprim domain PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 707 745 1.6E-12 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 746 807 4.1E-22 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 591 626 1.5E-11 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00437 277 532 5.6E-119 T 26-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01131 DNA topoisomerase 162 569 4.0E-128 T 26-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.70.20.10 218 337 7.1E-33 T 26-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.70.20.10 343 478 3.6E-34 T 26-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00493 3 137 7.2E-31 T 26-04-2016 IPR006171 Toprim domain PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 702 745 4.76E-9 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 314 328 - T 26-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 760 795 2.1E-11 T 26-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 826 865 8.3E-20 T 26-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.460.10 169 216 2.1E-57 T 26-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.460.10 479 583 2.1E-57 T 26-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 636 8.4E-250 T 26-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 811 867 1.07E-23 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PANTHER PTHR11390:SF27 1 37 0.0 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PANTHER PTHR11390:SF27 72 778 0.0 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 746 806 1.7E-16 T 26-04-2016 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00436 138 226 1.5E-50 T 26-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01751 Toprim domain 5 147 2.3E-32 T 26-04-2016 IPR006171 Toprim domain PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PANTHER PTHR11390 1 37 0.0 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 PANTHER PTHR11390 72 778 0.0 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 PAM18_RS10015 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF56712 3 612 4.32E-202 T 26-04-2016 IPR023405 DNA topoisomerase, type IA, core domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SUPERFAMILY SSF55874 854 1017 9.43E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Gene3D G3DSA:3.30.565.10 865 1021 4.3E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SUPERFAMILY SSF52172 1037 1157 1.71E-20 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Gene3D G3DSA:3.40.50.2300 1030 1156 1.2E-20 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SMART SM00387 908 1018 2.0E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423 794 1156 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423 182 201 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423 636 768 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423 10 63 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SUPERFAMILY SSF55785 629 751 1.9E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Gene3D G3DSA:3.30.450.20 629 751 2.3E-13 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Pfam PF12860 PAS fold 644 758 1.4E-45 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Gene3D G3DSA:1.10.287.130 791 860 1.1E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 996 6.3E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 957 6.3E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1015 6.3E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 971 6.3E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SUPERFAMILY SSF47384 781 865 3.53E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Pfam PF00512 His Kinase A (phospho-acceptor) domain 798 864 2.0E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Pfam PF00072 Response regulator receiver domain 1041 1151 5.4E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 909 1017 6.3E-19 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SMART SM00388 798 864 1.4E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423:SF439 794 1156 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423:SF439 182 201 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423:SF439 636 768 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 PANTHER PTHR24423:SF439 10 63 5.0E-239 T 26-04-2016 PAM18_RS08705 7f912f09e99e454c508cd079506b8524 1159 SMART SM00448 1039 1152 9.5E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 Pfam PF01266 FAD dependent oxidoreductase 38 391 5.9E-50 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 PANTHER PTHR13847:SF215 1 433 4.3E-303 T 26-04-2016 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 SUPERFAMILY SSF51905 355 413 1.34E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 SUPERFAMILY SSF51905 37 264 1.34E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 Gene3D G3DSA:3.50.50.60 355 410 2.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 Gene3D G3DSA:3.50.50.60 184 263 2.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 Gene3D G3DSA:3.50.50.60 24 130 2.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17845 8f8ea95835507fc7588b8e2616bb0c61 436 PANTHER PTHR13847 1 433 4.3E-303 T 26-04-2016 PAM18_RS11830 02159889095d449624d7e5cc6afc9107 359 Pfam PF03934 Type II secretion system (T2SS), protein K 138 275 1.1E-6 T 26-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 PANTHER PTHR30133 1 229 1.2E-175 T 26-04-2016 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 2.1E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 6.8E-20 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 Gene3D G3DSA:1.10.3720.10 8 220 8.8E-41 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 SUPERFAMILY SSF161098 9 206 5.76E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21200 73c909924871aaac24fb4ce6acdc0411 229 PANTHER PTHR30133:SF3 1 229 1.2E-175 T 26-04-2016 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 3 87 1.9E-20 T 26-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 100 184 1.3E-21 T 26-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.6E-65 T 26-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 93 194 7.4E-32 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 1 88 4.0E-25 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 PANTHER PTHR21098 1 219 5.8E-106 T 26-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 PIRSF PIRSF000498 1 212 1.3E-76 T 26-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 105 194 3.0E-32 T 26-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS04505 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 5 104 6.4E-30 T 26-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 Gene3D G3DSA:3.40.50.300 232 499 2.2E-97 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 Pfam PF00437 Type II/IV secretion system protein 129 393 5.3E-89 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 16 498 8.9E-217 T 26-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 SUPERFAMILY SSF160246 16 80 2.41E-14 T 26-04-2016 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 PANTHER PTHR30258:SF9 1 501 0.0 T 26-04-2016 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 Gene3D G3DSA:3.30.450.90 100 226 7.2E-54 T 26-04-2016 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 PANTHER PTHR30258 1 501 0.0 T 26-04-2016 PAM18_RS09550 079f775b27c547206958e7a3bda979a5 501 SUPERFAMILY SSF52540 111 498 8.9E-106 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PRINTS PR00069 Aldo-keto reductase signature 154 183 4.1E-42 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PRINTS PR00069 Aldo-keto reductase signature 191 215 4.1E-42 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PRINTS PR00069 Aldo-keto reductase signature 30 54 4.1E-42 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PRINTS PR00069 Aldo-keto reductase signature 86 104 4.1E-42 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PRINTS PR00069 Aldo-keto reductase signature 119 136 4.1E-42 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 26-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 Gene3D G3DSA:3.20.20.100 6 264 1.7E-85 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 Pfam PF00248 Aldo/keto reductase family 12 255 4.8E-46 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 SUPERFAMILY SSF51430 7 262 8.77E-79 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 34 51 - T 26-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PANTHER PTHR11732:SF100 6 272 4.0E-167 T 26-04-2016 PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PANTHER PTHR11732 6 272 4.0E-167 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS03935 5ee26640b2093fdf906e36929666ca11 272 PIRSF PIRSF000097 2 270 2.5E-60 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 Gene3D G3DSA:3.30.750.80 78 181 9.2E-31 T 26-04-2016 PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 PANTHER PTHR11061 3 398 1.5E-103 T 26-04-2016 PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 344 7.9E-19 T 26-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 Gene3D G3DSA:2.30.130.10 5 74 6.0E-11 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 SUPERFAMILY SSF53335 85 391 8.05E-73 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 SUPERFAMILY SSF88697 4 75 3.73E-9 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 Gene3D G3DSA:3.40.50.150 185 393 5.6E-62 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01785 d46175528074ae3f1069449d2c728091 398 PANTHER PTHR11061:SF12 3 398 1.5E-103 T 26-04-2016 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 PANTHER PTHR30483 10 383 1.4E-155 T 26-04-2016 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 PANTHER PTHR30483:SF8 10 383 1.4E-155 T 26-04-2016 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 Pfam PF13433 Periplasmic binding protein domain 10 369 5.5E-115 T 26-04-2016 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 Gene3D G3DSA:3.40.50.2300 123 306 1.2E-56 T 26-04-2016 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 SUPERFAMILY SSF53822 10 375 1.82E-89 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 81 6.7E-8 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 6.7E-8 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS08230 6471ecf2e04cf2cc046854f58fe35c3a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 6.7E-8 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PIRSF PIRSF001467 1 165 2.4E-26 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 26-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 Gene3D G3DSA:2.40.100.10 2 163 2.7E-51 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PANTHER PTHR11071 1 165 2.4E-78 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 SUPERFAMILY SSF50891 2 162 4.53E-57 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PANTHER PTHR11071:SF192 1 165 2.4E-78 T 26-04-2016 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 2.4E-46 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.4E-13 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.4E-13 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS16685 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.4E-13 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 PANTHER PTHR10196:SF44 1 494 0.0 T 26-04-2016 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.7E-73 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 447 4.2E-56 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 54.257 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 1 251 1.2E-98 T 26-04-2016 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 491 2.4E-217 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 4 253 2.85E-93 T 26-04-2016 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 253 492 9.06E-78 T 26-04-2016 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 PIRSF PIRSF000538 2 494 2.6E-169 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 PANTHER PTHR10196 1 494 0.0 T 26-04-2016 PAM18_RS07235 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 252 491 5.3E-95 T 26-04-2016 PAM18_RS19620 a3f0a3c31e0f1c2d0759d34547a9fc9c 472 Pfam PF13520 Amino acid permease 9 412 3.1E-61 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19620 a3f0a3c31e0f1c2d0759d34547a9fc9c 472 PIRSF PIRSF006060 1 470 1.5E-44 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19620 a3f0a3c31e0f1c2d0759d34547a9fc9c 472 PANTHER PTHR11785 3 466 1.3E-215 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19620 a3f0a3c31e0f1c2d0759d34547a9fc9c 472 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 472 9.3E-153 T 26-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PAM18_RS19620 a3f0a3c31e0f1c2d0759d34547a9fc9c 472 PANTHER PTHR11785:SF77 3 466 1.3E-215 T 26-04-2016 PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 345 1.2E-173 T 26-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 SUPERFAMILY SSF90002 268 349 2.75E-19 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 Gene3D G3DSA:3.40.50.300 6 231 2.5E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 215 6.0E-59 T 26-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 Gene3D G3DSA:3.30.1220.10 243 350 1.6E-29 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 PANTHER PTHR13748:SF10 1 350 6.8E-165 T 26-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 SMART SM00833 258 349 9.5E-8 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 270 349 6.0E-17 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 PANTHER PTHR13748 1 350 6.8E-165 T 26-04-2016 PAM18_RS10355 0fdf21ea68c9d60bc63f35d661ec033f 350 SUPERFAMILY SSF52540 6 242 3.22E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.20.20.450 1156 1404 8.1E-105 T 26-04-2016 IPR001633 EAL domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55785 842 965 4.89E-22 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 713 852 3.5E-11 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 712 5.7E-11 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 857 973 1.5E-18 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55785 569 703 1.13E-16 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55785 283 381 3.77E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55073 983 1144 3.61E-50 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 288 411 1.1E-9 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.70.270 979 1151 1.4E-60 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 420 442 2.5E-9 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 477 566 2.5E-9 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00052 1153 1399 4.5E-126 T 26-04-2016 IPR001633 EAL domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 PANTHER PTHR10799:SF774 849 1253 9.7E-89 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF08447 PAS fold 608 699 4.1E-14 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 711 842 1.2E-16 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF13188 PAS domain 305 349 0.0068 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF13426 PAS domain 865 966 3.5E-17 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF13426 PAS domain 729 844 9.5E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00267 967 1143 2.1E-71 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00091 584 653 1.7E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00091 853 920 6.1E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00091 717 784 0.83 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00091 292 358 0.025 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF00563 EAL domain 1159 1394 8.0E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 567 710 1.5E-27 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55785 480 579 1.47E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 PANTHER PTHR10799 849 1253 9.7E-89 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF55785 707 843 1.82E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SUPERFAMILY SSF141868 1158 1405 5.1E-92 T 26-04-2016 IPR001633 EAL domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00086 803 845 7.4E-4 T 26-04-2016 IPR001610 PAC motif PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00086 925 967 1.2E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 SMART SM00086 662 705 0.0065 T 26-04-2016 IPR001610 PAC motif PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Gene3D G3DSA:3.30.450.20 843 961 6.9E-24 T 26-04-2016 PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 975 1141 4.3E-41 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS23995 2ecb4b76d91e562da7fa3f57f24f8a2c 1415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 978 1139 1.4E-51 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 93 439 3.1E-115 T 26-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PANTHER PTHR11236:SF18 9 444 2.3E-163 T 26-04-2016 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 Gene3D G3DSA:3.60.120.10 7 444 1.4E-150 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 17 138 1.8E-15 T 26-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 SUPERFAMILY SSF56322 5 444 1.18E-141 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 Pfam PF00425 chorismate binding enzyme 182 435 5.7E-99 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PANTHER PTHR11236 9 444 2.3E-163 T 26-04-2016 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PRINTS PR00095 Anthranilate synthase component I signature 392 406 3.3E-16 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PRINTS PR00095 Anthranilate synthase component I signature 297 310 3.3E-16 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PRINTS PR00095 Anthranilate synthase component I signature 377 391 3.3E-16 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS16865 9d19758b4d09b976c91b411e0d35833d 453 PRINTS PR00095 Anthranilate synthase component I signature 283 296 3.3E-16 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS14615 2b0ad69df972ff929185479598557560 378 Pfam PF03497 Anthrax toxin LF subunit 40 203 1.0E-67 T 26-04-2016 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 PAM18_RS14615 2b0ad69df972ff929185479598557560 378 SUPERFAMILY SSF81298 26 378 1.7E-138 T 26-04-2016 PAM18_RS23320 a3630f1442726f9fecfa3794467981d0 480 Pfam PF01523 Putative modulator of DNA gyrase 38 330 2.8E-65 T 26-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS23320 a3630f1442726f9fecfa3794467981d0 480 PIRSF PIRSF004919 20 479 1.9E-140 T 26-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS23320 a3630f1442726f9fecfa3794467981d0 480 PANTHER PTHR30624:SF4 15 480 2.5E-254 T 26-04-2016 PAM18_RS23320 a3630f1442726f9fecfa3794467981d0 480 PANTHER PTHR30624 15 480 2.5E-254 T 26-04-2016 PAM18_RS23320 a3630f1442726f9fecfa3794467981d0 480 SUPERFAMILY SSF111283 26 478 1.28E-131 T 26-04-2016 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 SUPERFAMILY SSF103481 182 278 8.37E-9 T 26-04-2016 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 PANTHER PTHR32322 1 285 1.0E-66 T 26-04-2016 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 PANTHER PTHR32322:SF9 1 285 1.0E-66 T 26-04-2016 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 SUPERFAMILY SSF103481 42 139 2.62E-8 T 26-04-2016 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 Pfam PF00892 EamA-like transporter family 7 135 8.5E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS15725 db1dc27e9464045d1e3ddefcb0ee10c0 287 Pfam PF00892 EamA-like transporter family 146 275 5.1E-14 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Pfam PF02119 Flagellar P-ring protein 24 368 4.6E-146 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PANTHER PTHR30381:SF1 1 369 1.8E-232 T 26-04-2016 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PANTHER PTHR30381 1 369 1.8E-232 T 26-04-2016 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 24 39 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 166 184 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 192 210 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 256 268 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 39 54 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 59 74 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 8.1E-90 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS20225 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 369 42.04 T 26-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 Gene3D G3DSA:3.30.450.20 103 182 0.001 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423:SF485 321 337 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423:SF485 187 291 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423:SF485 358 584 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423:SF485 15 44 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 579 6.7E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 SUPERFAMILY SSF103190 108 193 1.16E-13 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 SUPERFAMILY SSF47384 358 431 1.96E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 430 9.1E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PIRSF PIRSF036431 1 588 1.0E-192 T 26-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423 321 337 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423 187 291 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423 358 584 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 PANTHER PTHR24423 15 44 8.4E-137 T 26-04-2016 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 SMART SM00388 362 430 3.2E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 Gene3D G3DSA:3.30.565.10 434 579 1.7E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 SMART SM00387 472 581 1.0E-30 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 Gene3D G3DSA:1.10.287.130 359 426 4.1E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS28790 65d28635d04ae756420d229c8c8fc139 588 SUPERFAMILY SSF55874 433 579 9.3E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.0E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.0E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.0E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.0E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PANTHER PTHR30065 2 256 8.5E-99 T 26-04-2016 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 PANTHER PTHR30065:SF1 2 256 8.5E-99 T 26-04-2016 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 9.6E-68 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS18845 a330790c31a5e4dcbb607e204d52a949 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 1.5E-82 T 26-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 Pfam PF00171 Aldehyde dehydrogenase family 32 490 3.8E-168 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 PANTHER PTHR11699 1 496 0.0 T 26-04-2016 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 PANTHER PTHR11699:SF210 1 496 0.0 T 26-04-2016 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 SUPERFAMILY SSF53720 15 494 3.4E-168 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 Gene3D G3DSA:3.40.309.10 279 466 1.4E-65 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS01085 c3a1095539f2b0e0eccde87fa35897ff 496 Gene3D G3DSA:3.40.605.10 19 278 8.8E-94 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 Pfam PF07286 Protein of unknown function (DUF1445) 117 259 3.2E-59 T 26-04-2016 IPR009906 Protein of unknown function DUF1445 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 PIRSF PIRSF029755 3 265 8.7E-115 T 26-04-2016 IPR016938 Uncharacterised protein family UPF0317 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 PANTHER PTHR32022 1 265 5.4E-154 T 26-04-2016 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 Gene3D G3DSA:3.40.1640.10 6 169 1.5E-58 T 26-04-2016 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 Hamap MF_01830 UPF0317 protein . 13 264 49.731 T 26-04-2016 IPR016938 Uncharacterised protein family UPF0317 PAM18_RS15020 5af3cfe276f0b7468a1faecb6a30f0c2 265 SUPERFAMILY SSF160920 10 259 3.01E-101 T 26-04-2016 PAM18_RS01455 6bb206f5691c8e003a14819d12801c18 460 PANTHER PTHR34596 1 277 1.5E-169 T 26-04-2016 PAM18_RS01455 6bb206f5691c8e003a14819d12801c18 460 PANTHER PTHR34596 298 460 1.5E-169 T 26-04-2016 PAM18_RS01455 6bb206f5691c8e003a14819d12801c18 460 Pfam PF03573 outer membrane porin, OprD family 30 458 7.7E-154 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS01455 6bb206f5691c8e003a14819d12801c18 460 Gene3D G3DSA:2.40.160.10 35 460 2.3E-147 T 26-04-2016 IPR023614 Porin domain PAM18_RS18175 537fe15e7803afacb69f1a2f4494f70b 141 Pfam PF03795 YCII-related domain 1 114 2.9E-31 T 26-04-2016 IPR005545 YCII-related PAM18_RS18175 537fe15e7803afacb69f1a2f4494f70b 141 SUPERFAMILY SSF54909 1 118 4.83E-37 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS18175 537fe15e7803afacb69f1a2f4494f70b 141 PANTHER PTHR35174:SF1 2 141 1.1E-74 T 26-04-2016 PAM18_RS18175 537fe15e7803afacb69f1a2f4494f70b 141 Gene3D G3DSA:3.30.70.1060 1 117 4.4E-42 T 26-04-2016 PAM18_RS18175 537fe15e7803afacb69f1a2f4494f70b 141 PANTHER PTHR35174 2 141 1.1E-74 T 26-04-2016 PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 215 30.36 T 26-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 PANTHER PTHR11237:SF3 1 215 6.4E-143 T 26-04-2016 PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 53 212 6.0E-38 T 26-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 Gene3D G3DSA:1.20.1260.10 46 182 1.4E-13 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 SUPERFAMILY SSF47240 51 183 8.57E-18 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS03225 902d81795222cec74c793babab6bf0b7 215 PANTHER PTHR11237 1 215 6.4E-143 T 26-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 ProSitePatterns PS00455 Putative AMP-binding domain signature. 385 396 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Gene3D G3DSA:1.10.1200.10 743 809 1.7E-12 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Pfam PF00550 Phosphopantetheine attachment site 742 804 2.9E-6 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Pfam PF00668 Condensation domain 823 1109 6.8E-31 T 26-04-2016 IPR001242 Condensation domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Pfam PF13745 HxxPF-repeated domain 1133 1221 4.3E-6 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 PANTHER PTHR24096:SF247 179 768 4.4E-257 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Gene3D G3DSA:3.40.50.980 392 548 8.6E-33 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 SUPERFAMILY SSF56801 208 752 3.14E-141 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Pfam PF13193 AMP-binding enzyme C-terminal domain 642 715 3.2E-8 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 SUPERFAMILY SSF52777 824 977 4.11E-18 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 ProSitePatterns PS00012 Phosphopantetheine attachment site. 763 778 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Pfam PF00501 AMP-binding enzyme 245 633 1.8E-85 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 SUPERFAMILY SSF52777 1004 1236 1.06E-31 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 PANTHER PTHR24096 179 768 4.4E-257 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 266 657 2.5E-118 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Gene3D G3DSA:2.30.38.10 549 622 2.5E-23 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Gene3D G3DSA:3.40.50.980 241 391 2.4E-47 T 26-04-2016 PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 SUPERFAMILY SSF47336 735 823 1.44E-8 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14060 a884dae5e8475108336fbfe47c8477ca 1249 Gene3D G3DSA:3.30.300.30 629 742 4.5E-32 T 26-04-2016 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00862 151 225 6.4E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 226 3.5E-109 T 26-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:1.10.10.10 129 227 8.6E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 PANTHER PTHR26402 4 225 2.8E-144 T 26-04-2016 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:3.40.50.2300 4 124 1.1E-42 T 26-04-2016 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 PANTHER PTHR26402:SF576 4 225 2.8E-144 T 26-04-2016 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF52172 3 125 2.85E-44 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.4E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF46894 128 226 7.11E-29 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS27995 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00448 4 117 8.3E-46 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 PANTHER PTHR30204:SF22 1 263 7.9E-86 T 26-04-2016 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 Gene3D G3DSA:3.20.80.10 119 269 1.1E-36 T 26-04-2016 IPR011256 Regulatory factor, effector binding domain PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 SMART SM00871 120 270 1.4E-33 T 26-04-2016 IPR010499 Bacterial transcription activator, effector binding PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 Gene3D G3DSA:1.10.1660.10 2 113 2.3E-26 T 26-04-2016 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 SUPERFAMILY SSF46955 2 108 1.31E-25 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 PANTHER PTHR30204 1 263 7.9E-86 T 26-04-2016 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 SUPERFAMILY SSF55136 120 269 1.05E-32 T 26-04-2016 IPR011256 Regulatory factor, effector binding domain PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 SMART SM00422 2 72 4.8E-20 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 Pfam PF13411 MerR HTH family regulatory protein 3 68 1.0E-15 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS25535 c03b58cfba07ef486f9beed267f57291 270 Pfam PF14526 Integron-associated effector binding protein 123 269 1.7E-37 T 26-04-2016 IPR029441 Integron-associated effector binding protein PAM18_RS22790 b1890bbc84f5eefd09bb1ac704f70578 190 PANTHER PTHR34478 1 190 5.6E-102 T 26-04-2016 PAM18_RS22790 b1890bbc84f5eefd09bb1ac704f70578 190 Pfam PF04011 LemA family 9 185 4.7E-57 T 26-04-2016 IPR007156 LemA PAM18_RS22790 b1890bbc84f5eefd09bb1ac704f70578 190 PANTHER PTHR34478:SF1 1 190 5.6E-102 T 26-04-2016 PAM18_RS22790 b1890bbc84f5eefd09bb1ac704f70578 190 SUPERFAMILY SSF140478 26 177 3.01E-45 T 26-04-2016 IPR023353 LemA-like domain PAM18_RS22790 b1890bbc84f5eefd09bb1ac704f70578 190 Gene3D G3DSA:1.20.1440.20 14 186 3.4E-53 T 26-04-2016 IPR023353 LemA-like domain PAM18_RS15065 d60be0036748cf9e89ac23fb549b8d54 132 Pfam PF03860 Domain of Unknown Function (DUF326) 111 128 5.2E-5 T 26-04-2016 IPR005560 Protein of unknown function DUF326 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 PANTHER PTHR11403 1 120 2.2E-125 T 26-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 PANTHER PTHR11403 150 295 2.2E-125 T 26-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.20.120.80 79 294 1.1E-68 T 26-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 Pfam PF00510 Cytochrome c oxidase subunit III 7 294 2.2E-50 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 SUPERFAMILY SSF81452 3 294 7.85E-85 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.10.287.70 2 75 4.8E-21 T 26-04-2016 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 PANTHER PTHR11403:SF0 1 120 2.2E-125 T 26-04-2016 PAM18_RS00550 ca6c48466a5683aa24913dcc16163538 295 PANTHER PTHR11403:SF0 150 295 2.2E-125 T 26-04-2016 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 SUPERFAMILY SSF88946 6 76 5.49E-11 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 PANTHER PTHR30173:SF9 14 168 3.4E-37 T 26-04-2016 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 Pfam PF04542 Sigma-70 region 2 19 79 3.6E-13 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 Gene3D G3DSA:1.10.1740.10 21 79 2.0E-8 T 26-04-2016 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 SUPERFAMILY SSF88659 90 166 1.44E-12 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 Gene3D G3DSA:1.10.10.10 107 167 2.1E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 163 5.5E-16 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 Pfam PF08281 Sigma-70, region 4 110 162 5.4E-11 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15355 c5d4ec78533c8005a7055a3e1e3258aa 168 PANTHER PTHR30173 14 168 3.4E-37 T 26-04-2016 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 178 370 1.8E-64 T 26-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF52821 397 482 5.63E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 2.7E-106 T 26-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 386 483 7.1E-36 T 26-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 206.371 T 26-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 PANTHER PTHR14911 3 418 2.6E-260 T 26-04-2016 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 PANTHER PTHR14911:SF15 3 418 2.6E-260 T 26-04-2016 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF52402 181 374 2.14E-38 T 26-04-2016 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 Pfam PF02926 THUMP domain 29 166 1.5E-21 T 26-04-2016 IPR004114 THUMP domain GO:0003723 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 SMART SM00981 77 167 5.1E-24 T 26-04-2016 IPR004114 THUMP domain GO:0003723 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF143437 1 175 3.84E-48 T 26-04-2016 PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.40.250.10 393 481 1.3E-6 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26750 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.40.50.620 175 335 2.4E-34 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS11815 3cbb6090e580b936418dff0f285b9f76 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 3.8E-6 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS11815 3cbb6090e580b936418dff0f285b9f76 136 Gene3D G3DSA:3.30.700.10 15 37 9.2E-5 T 26-04-2016 PAM18_RS11815 3cbb6090e580b936418dff0f285b9f76 136 PANTHER PTHR30093 11 97 1.1E-36 T 26-04-2016 PAM18_RS11815 3cbb6090e580b936418dff0f285b9f76 136 SUPERFAMILY SSF54523 15 97 4.16E-12 T 26-04-2016 PAM18_RS11815 3cbb6090e580b936418dff0f285b9f76 136 PANTHER PTHR30093:SF8 11 97 1.1E-36 T 26-04-2016 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 Gene3D G3DSA:3.40.50.720 148 257 1.5E-29 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 SUPERFAMILY SSF50129 8 142 8.65E-39 T 26-04-2016 IPR011032 GroES-like PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 Gene3D G3DSA:3.90.180.10 3 147 1.1E-49 T 26-04-2016 IPR011032 GroES-like PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 SUPERFAMILY SSF51735 112 267 2.8E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 SMART SM00829 11 323 1.3E-35 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 9.6E-9 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 PANTHER PTHR11695:SF605 16 325 4.1E-138 T 26-04-2016 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 26-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 PANTHER PTHR11695 16 325 4.1E-138 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS00115 2abcdf50f019c4294f64ea724cf32dc4 325 Pfam PF00107 Zinc-binding dehydrogenase 152 278 7.0E-27 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 Pfam PF01566 Natural resistance-associated macrophage protein 54 411 2.5E-131 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PANTHER PTHR11706 6 438 4.0E-192 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 382 401 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 350 367 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 166 187 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 113 139 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 218 241 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 141 160 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 PRINTS PR00447 Natural resistance-associated macrophage protein signature 322 341 2.1E-57 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 32 406 1.7E-106 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS22610 75cbcf25518154fde68671caaf5c95cd 439 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 25 438 39.808 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS11650 df9cb733f876d8311421e36bdd38b5fe 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 113 2.7E-21 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS11650 df9cb733f876d8311421e36bdd38b5fe 131 SUPERFAMILY SSF51316 1 130 2.3E-47 T 26-04-2016 IPR011057 Mss4-like PAM18_RS11650 df9cb733f876d8311421e36bdd38b5fe 131 Gene3D G3DSA:3.90.1590.10 2 128 2.0E-41 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS11650 df9cb733f876d8311421e36bdd38b5fe 131 PANTHER PTHR33337 1 131 8.0E-52 T 26-04-2016 PAM18_RS11650 df9cb733f876d8311421e36bdd38b5fe 131 PANTHER PTHR33337:SF11 1 131 8.0E-52 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 4.7E-27 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 4.7E-27 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 4.7E-27 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 4.7E-27 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF50249 2 106 7.43E-34 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:3.30.930.10 134 278 1.5E-112 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:3.30.930.10 417 586 1.5E-112 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:3.30.1360.30 279 416 2.5E-46 T 26-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:2.40.50.140 1 109 1.3E-40 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.9E-243 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55261 292 422 1.26E-44 T 26-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 564 37.917 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55681 109 290 1.33E-102 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55681 422 585 1.33E-102 T 26-04-2016 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 2.1E-108 T 26-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PANTHER PTHR22594:SF5 373 572 1.5E-251 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PANTHER PTHR22594:SF5 1 299 1.5E-251 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PANTHER PTHR22594 373 572 1.5E-251 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 PANTHER PTHR22594 1 299 1.5E-251 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 1.7E-16 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PAM18_RS20800 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF02938 GAD domain 310 409 1.2E-31 T 26-04-2016 IPR029351 GAD domain PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 SUPERFAMILY SSF69572 3 254 1.16E-65 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 PANTHER PTHR10953:SF159 1 159 1.1E-132 T 26-04-2016 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 PANTHER PTHR10953:SF159 189 256 1.1E-132 T 26-04-2016 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 PANTHER PTHR10953 1 159 1.1E-132 T 26-04-2016 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 PANTHER PTHR10953 189 256 1.1E-132 T 26-04-2016 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 Pfam PF00899 ThiF family 15 262 1.1E-42 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS19770 b5cf80187a56d66ba0c110762ce074ce 270 Gene3D G3DSA:3.40.50.720 4 254 5.5E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 PANTHER PTHR32089 44 521 1.4E-173 T 26-04-2016 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 Gene3D G3DSA:1.10.287.950 273 491 4.3E-61 T 26-04-2016 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 111 3.0E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 8.4E-22 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 8.4E-22 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 8.4E-22 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 Gene3D G3DSA:3.30.450.20 20 112 3.2E-23 T 26-04-2016 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 SMART SM00283 259 520 1.0E-80 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 PANTHER PTHR32089:SF64 44 521 1.4E-173 T 26-04-2016 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 519 8.5E-50 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 Pfam PF08447 PAS fold 31 113 3.1E-15 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 SUPERFAMILY SSF55785 21 114 3.32E-26 T 26-04-2016 IPR000014 PAS domain PAM18_RS17865 d431ce6517217220d3484175e39975a1 521 SUPERFAMILY SSF58104 241 521 2.62E-75 T 26-04-2016 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 137 236 5.3E-19 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF09317 Domain of unknown function (DUF1974) 517 802 8.9E-105 T 26-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 337 9.8E-9 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:1.20.140.10 353 509 9.9E-29 T 26-04-2016 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:1.10.540.10 99 236 1.4E-33 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 508 2.4E-13 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 PANTHER PTHR10909 53 536 6.8E-251 T 26-04-2016 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 PANTHER PTHR10909:SF283 53 536 6.8E-251 T 26-04-2016 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 SUPERFAMILY SSF56645 123 358 1.16E-46 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 Gene3D G3DSA:2.40.110.10 240 352 6.1E-17 T 26-04-2016 PAM18_RS11025 52d4df9d1432765a7f05981dddf373f7 815 SUPERFAMILY SSF47203 363 513 4.83E-27 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS01740 95c5f0114ea4f355ac7c5ca879e9bf9e 461 Pfam PF11067 Protein of unknown function (DUF2868) 148 444 4.2E-92 T 26-04-2016 IPR021296 Protein of unknown function DUF2868 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 650 2.9E-21 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF81665 232 326 3.53E-121 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF81665 686 898 3.53E-121 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF81665 11 122 3.53E-121 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Gene3D G3DSA:1.20.1110.10 63 116 8.6E-110 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Gene3D G3DSA:1.20.1110.10 605 896 8.6E-110 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 546 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 1.5E-41 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Gene3D G3DSA:2.70.150.10 27 62 1.6E-37 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Gene3D G3DSA:2.70.150.10 117 230 1.6E-37 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 511 6.0E-20 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 6.0E-20 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 6.0E-20 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 6.0E-20 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 607 728 1.1E-35 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 353 6.7E-41 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PANTHER PTHR24093 789 900 0.0 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PANTHER PTHR24093 7 772 0.0 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 78 1.9E-16 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Pfam PF00689 Cation transporting ATPase, C-terminus 721 893 4.1E-45 T 26-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF81660 339 539 2.18E-54 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SMART SM00831 11 84 1.3E-32 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PANTHER PTHR24093:SF254 789 900 0.0 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 PANTHER PTHR24093:SF254 7 772 0.0 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF56784 330 350 3.04E-62 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF56784 490 740 3.04E-62 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 SUPERFAMILY SSF81653 122 229 2.48E-30 T 26-04-2016 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Gene3D G3DSA:3.40.1110.10 322 542 9.0E-57 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS18940 4fab246c1f105b0ffdb4ae9e458b1045 902 Pfam PF00122 E1-E2 ATPase 89 323 6.5E-64 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 SUPERFAMILY SSF102114 56 322 9.03E-68 T 26-04-2016 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 Gene3D G3DSA:3.20.20.70 58 319 3.4E-70 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 TIGRFAM TIGR00510 lipA: lipoyl synthase 38 321 8.6E-128 T 26-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 PANTHER PTHR10949 17 326 1.1E-172 T 26-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 Pfam PF04055 Radical SAM superfamily 97 256 1.3E-14 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 SMART SM00729 90 299 1.1E-13 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 43 79 1.9E-7 T 26-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 PIRSF PIRSF005963 6 327 4.5E-128 T 26-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04800 1f8279358402aabda6a7f9ef61c39fc8 327 Hamap MF_00206 Lipoyl synthase [lipA]. 1 327 153.716 T 26-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 SUPERFAMILY SSF50249 13 151 1.05E-35 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PANTHER PTHR22594 1 500 2.2E-272 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 500 3.6E-202 T 26-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 Pfam PF01336 OB-fold nucleic acid binding domain 69 141 2.6E-7 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PANTHER PTHR22594:SF4 1 500 2.2E-272 T 26-04-2016 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 SUPERFAMILY SSF55681 158 498 1.55E-123 T 26-04-2016 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 497 2.5E-83 T 26-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 Gene3D G3DSA:3.30.930.10 153 496 3.3E-122 T 26-04-2016 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 1.6E-37 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 1.6E-37 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 1.6E-37 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 1.6E-37 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 1.6E-37 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 500 43.703 T 26-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 PAM18_RS06310 406a6e34cd9a2822760f294ca17e7b84 501 Gene3D G3DSA:2.40.50.140 16 150 4.1E-39 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 PIRSF PIRSF000876 1 335 4.8E-98 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 SUPERFAMILY SSF52738 151 334 1.96E-61 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 PANTHER PTHR24421:SF16 1 330 1.5E-120 T 26-04-2016 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 SMART SM00448 1 118 9.2E-10 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 PANTHER PTHR24421 1 330 1.5E-120 T 26-04-2016 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 Gene3D G3DSA:3.40.50.2300 1 103 6.5E-22 T 26-04-2016 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 Pfam PF00072 Response regulator receiver domain 4 102 2.2E-16 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 335 32.538 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 Gene3D G3DSA:3.40.50.180 150 334 1.5E-67 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 SUPERFAMILY SSF52172 2 104 6.97E-21 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS06295 cf8823f8045481a6b4b4852e598c945f 335 Pfam PF01339 CheB methylesterase 154 330 2.5E-57 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 19 150 23.07 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 Gene3D G3DSA:1.10.940.10 17 151 3.4E-44 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 Pfam PF01029 NusB family 22 146 4.3E-34 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 SUPERFAMILY SSF48013 19 150 3.14E-43 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 4.2E-44 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 PAM18_RS04520 2dc0859e4533e7c3d3f9b09f400300cc 159 PANTHER PTHR11078 3 153 5.3E-51 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 PAM18_RS22910 bf319587685ea82636a23bdf0d4348d7 127 SUPERFAMILY SSF46767 29 110 3.92E-21 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS22910 bf319587685ea82636a23bdf0d4348d7 127 PANTHER PTHR10815:SF2 29 123 7.7E-30 T 26-04-2016 PAM18_RS22910 bf319587685ea82636a23bdf0d4348d7 127 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 30 109 1.9E-20 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS22910 bf319587685ea82636a23bdf0d4348d7 127 PANTHER PTHR10815 29 123 7.7E-30 T 26-04-2016 PAM18_RS22910 bf319587685ea82636a23bdf0d4348d7 127 Gene3D G3DSA:1.10.10.10 28 112 6.4E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SUPERFAMILY SSF55781 562 641 3.71E-5 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Gene3D G3DSA:3.30.565.10 704 875 6.4E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PANTHER PTHR24423 582 877 2.4E-221 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PANTHER PTHR24423 1 194 2.4E-221 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SMART SM00388 650 718 1.2E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 767 873 3.1E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 871 8.1E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 799 813 8.1E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 851 8.1E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 827 8.1E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SUPERFAMILY SSF52402 248 358 1.05E-13 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Gene3D G3DSA:1.20.120.620 387 489 5.5E-28 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Gene3D G3DSA:3.40.50.300 18 225 5.9E-94 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Pfam PF00582 Universal stress protein family 248 358 4.5E-11 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Gene3D G3DSA:1.10.287.130 646 703 4.7E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PANTHER PTHR24423:SF562 582 877 2.4E-221 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 PANTHER PTHR24423:SF562 1 194 2.4E-221 T 26-04-2016 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SUPERFAMILY SSF47384 646 719 1.9E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Pfam PF13493 Domain of unknown function (DUF4118) 390 494 2.2E-26 T 26-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SUPERFAMILY SSF55874 708 876 1.57E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Pfam PF00512 His Kinase A (phospho-acceptor) domain 651 718 3.9E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Gene3D G3DSA:3.40.50.620 243 358 1.6E-14 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 5.5E-91 T 26-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 PAM18_RS17485 b0480c63834754419706913e2e3ca024 885 SMART SM00387 762 874 1.5E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 SUPERFAMILY SSF52096 33 269 2.85E-58 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 PANTHER PTHR22855 1 538 0.0 T 26-04-2016 PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 PANTHER PTHR22855:SF29 1 538 0.0 T 26-04-2016 PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 Gene3D G3DSA:3.90.226.10 40 269 6.0E-53 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 Gene3D G3DSA:3.90.226.10 275 526 4.6E-72 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 Pfam PF01039 Carboxyl transferase domain 49 514 1.7E-115 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS10645 dac1d76c08a73528bc74b4412bebbad7 538 SUPERFAMILY SSF52096 277 535 2.13E-74 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF00691 OmpA family 174 264 3.9E-14 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 63 2.6E-17 T 26-04-2016 IPR025713 Motility protein B, N-terminal domain PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 PANTHER PTHR30329:SF2 1 301 1.7E-146 T 26-04-2016 PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 PANTHER PTHR30329 1 301 1.7E-146 T 26-04-2016 PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 SUPERFAMILY SSF103088 171 277 1.16E-22 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS25920 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Gene3D G3DSA:3.30.1330.60 168 277 1.0E-19 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 PANTHER PTHR10286 6 166 1.7E-72 T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 SUPERFAMILY SSF50324 3 174 2.09E-68 T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 Gene3D G3DSA:3.90.80.10 3 174 7.8E-61 T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.083 T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS04625 b134aa69193204bf8e5603a8619f9980 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.4E-53 T 26-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 Pfam PF00582 Universal stress protein family 4 145 1.3E-14 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 Pfam PF00582 Universal stress protein family 177 299 6.8E-15 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 Gene3D G3DSA:3.40.50.620 191 301 5.4E-16 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 PANTHER PTHR31964 1 87 1.0E-54 T 26-04-2016 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 PANTHER PTHR31964 243 303 1.0E-54 T 26-04-2016 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 PANTHER PTHR31964:SF41 1 87 1.0E-54 T 26-04-2016 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 PANTHER PTHR31964:SF41 243 303 1.0E-54 T 26-04-2016 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 Gene3D G3DSA:3.40.50.620 2 146 1.3E-20 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 SUPERFAMILY SSF52402 1 147 1.93E-22 T 26-04-2016 PAM18_RS22580 e669268e42e1cca96bae3c4d4fdcf49c 304 SUPERFAMILY SSF52402 163 300 3.6E-15 T 26-04-2016 PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.8E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 Gene3D G3DSA:3.40.50.720 4 248 9.3E-80 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 SUPERFAMILY SSF51735 4 247 1.05E-76 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PANTHER PTHR24322 157 188 7.7E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 PANTHER PTHR24322 7 140 7.7E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09425 6cc4395d5bf3a7e911d95e8da108d170 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 4.1E-63 T 26-04-2016 PAM18_RS28235 7c51514225cff7b2498fbf17afcc2c6e 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 1.6E-23 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS28235 7c51514225cff7b2498fbf17afcc2c6e 68 PANTHER PTHR37301 1 68 1.3E-34 T 26-04-2016 PAM18_RS28235 7c51514225cff7b2498fbf17afcc2c6e 68 SMART SM00530 5 61 1.5E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS28235 7c51514225cff7b2498fbf17afcc2c6e 68 SUPERFAMILY SSF47413 1 65 1.47E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS28235 7c51514225cff7b2498fbf17afcc2c6e 68 Gene3D G3DSA:1.10.260.40 2 66 2.5E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 Pfam PF00593 TonB dependent receptor 562 801 9.4E-33 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 SUPERFAMILY SSF56935 141 801 2.75E-125 T 26-04-2016 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 149 250 2.9E-16 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 800 4.3E-108 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 PANTHER PTHR32552:SF37 94 116 5.1E-291 T 26-04-2016 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 PANTHER PTHR32552:SF37 141 802 5.1E-291 T 26-04-2016 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 SMART SM00965 47 97 2.8E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 Gene3D G3DSA:2.40.170.20 266 801 1.0E-136 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 Gene3D G3DSA:2.170.130.10 128 258 5.6E-35 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 PANTHER PTHR32552 94 116 5.1E-291 T 26-04-2016 PAM18_RS03930 0425118cf7117c4154a9014073389bf9 802 PANTHER PTHR32552 141 802 5.1E-291 T 26-04-2016 PAM18_RS21750 0d9018a11bd5e154b5f55fe62ca17b09 134 PANTHER PTHR36530 1 134 4.2E-86 T 26-04-2016 PAM18_RS21750 0d9018a11bd5e154b5f55fe62ca17b09 134 PANTHER PTHR36530:SF2 1 134 4.2E-86 T 26-04-2016 PAM18_RS21750 0d9018a11bd5e154b5f55fe62ca17b09 134 SUPERFAMILY SSF141066 32 133 1.03E-27 T 26-04-2016 IPR018990 Proteinase inhibitor I42, chagasin PAM18_RS21750 0d9018a11bd5e154b5f55fe62ca17b09 134 Pfam PF09394 Chagasin family peptidase inhibitor I42 41 131 3.9E-23 T 26-04-2016 IPR018990 Proteinase inhibitor I42, chagasin PAM18_RS28590 8afebc222ed3086ef2da990efa2dcaeb 241 PANTHER PTHR35936:SF2 1 238 1.2E-155 T 26-04-2016 PAM18_RS28590 8afebc222ed3086ef2da990efa2dcaeb 241 SUPERFAMILY SSF53850 28 228 2.42E-19 T 26-04-2016 PAM18_RS28590 8afebc222ed3086ef2da990efa2dcaeb 241 PANTHER PTHR35936 1 238 1.2E-155 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 PANTHER PTHR32552:SF19 62 718 0.0 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 PANTHER PTHR32552:SF19 17 44 0.0 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 Pfam PF00593 TonB dependent receptor 477 716 4.6E-29 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 PANTHER PTHR32552 62 718 0.0 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 PANTHER PTHR32552 17 44 0.0 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 718 6.6E-91 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 174 2.5E-20 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 SUPERFAMILY SSF56935 49 718 3.66E-127 T 26-04-2016 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 Gene3D G3DSA:2.170.130.10 54 183 4.8E-31 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS10525 ac5f0086911e3cfda86d5633db3920e2 718 Gene3D G3DSA:2.40.170.20 190 718 5.3E-123 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS20280 3cbd73cc73c643a2d3d774a501642052 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 2.5E-54 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS20280 3cbd73cc73c643a2d3d774a501642052 307 PANTHER PTHR11795:SF371 3 307 3.5E-141 T 26-04-2016 PAM18_RS20280 3cbd73cc73c643a2d3d774a501642052 307 PANTHER PTHR11795 3 307 3.5E-141 T 26-04-2016 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 Gene3D G3DSA:3.40.50.2300 3 61 1.6E-4 T 26-04-2016 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 PANTHER PTHR24421:SF21 121 323 1.3E-90 T 26-04-2016 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 Pfam PF01339 CheB methylesterase 153 328 1.1E-39 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52172 4 61 3.56E-5 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 Gene3D G3DSA:3.40.50.180 147 333 7.6E-48 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 PANTHER PTHR24421 121 323 1.3E-90 T 26-04-2016 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 PIRSF PIRSF000876 4 337 2.6E-65 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS02095 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52738 149 332 6.15E-46 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 SMART SM00490 303 387 4.5E-18 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 SUPERFAMILY SSF52540 256 387 9.07E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 SUPERFAMILY SSF52540 44 225 9.07E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 Pfam PF00270 DEAD/DEAH box helicase 37 223 4.1E-26 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031:SF336 15 401 1.8E-77 T 26-04-2016 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031:SF336 1427 1448 1.8E-77 T 26-04-2016 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031:SF336 424 442 1.8E-77 T 26-04-2016 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 Pfam PF00271 Helicase conserved C-terminal domain 278 383 6.1E-18 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 Gene3D G3DSA:3.40.50.300 24 221 1.5E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 Gene3D G3DSA:3.40.50.300 269 400 2.2E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 SMART SM00487 32 249 1.5E-30 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 Pfam PF08494 DEAD/H associated 653 855 3.3E-49 T 26-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031 15 401 1.8E-77 T 26-04-2016 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031 1427 1448 1.8E-77 T 26-04-2016 PAM18_RS08700 7272e9fa8be72f0ea9575e3cfff11829 1448 PANTHER PTHR24031 424 442 1.8E-77 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 42.281 T 26-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 PANTHER PTHR10072:SF37 150 191 5.6E-89 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 PANTHER PTHR10072:SF37 1 100 5.6E-89 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 6.8E-96 T 26-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF117916 98 188 3.05E-26 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 3.0E-28 T 26-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 PANTHER PTHR10072 150 191 5.6E-89 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 PANTHER PTHR10072 1 100 5.6E-89 T 26-04-2016 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF89360 3 100 1.57E-19 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01106 NifU-like domain 114 180 2.0E-21 T 26-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 Gene3D G3DSA:2.60.300.12 2 97 3.7E-15 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS16370 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 100 6.2E-10 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:1.10.1860.10 1 88 1.6E-38 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 426.995 T 26-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 SUPERFAMILY SSF51645 2 723 0.0 T 26-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:3.20.20.360 266 296 2.7E-151 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:3.20.20.360 336 588 2.7E-151 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:3.20.20.360 89 135 2.7E-151 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 PANTHER PTHR21631:SF7 501 724 1.1E-158 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 PANTHER PTHR21631:SF7 33 41 1.1E-158 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Pfam PF01274 Malate synthase 18 697 4.0E-199 T 26-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 PANTHER PTHR21631 501 724 1.1E-158 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 PANTHER PTHR21631 33 41 1.1E-158 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:1.20.1220.12 590 723 1.5E-74 T 26-04-2016 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:2.170.170.11 298 335 8.4E-73 T 26-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 Gene3D G3DSA:2.170.170.11 136 264 8.4E-73 T 26-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS02440 6a7f039f7965734e0856d8917d701bbb 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 723 0.0 T 26-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 PANTHER PTHR30258 6 573 8.0E-247 T 26-04-2016 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 Gene3D G3DSA:3.30.450.90 169 292 1.1E-46 T 26-04-2016 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 158 1.9E-11 T 26-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 SUPERFAMILY SSF52540 177 573 7.41E-96 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 PANTHER PTHR30258:SF2 6 573 8.0E-247 T 26-04-2016 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 Pfam PF00437 Type II/IV secretion system protein 195 460 9.1E-78 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 SUPERFAMILY SSF160246 13 157 2.88E-20 T 26-04-2016 PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 Gene3D G3DSA:3.40.50.300 300 573 7.1E-94 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11800 dc85df561d5c0e842103f7dd7e717a22 575 SMART SM00382 321 442 1.2E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.7E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.7E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.7E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 PANTHER PTHR10992:SF771 1 262 3.5E-77 T 26-04-2016 PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 Pfam PF12697 Alpha/beta hydrolase family 25 251 2.6E-25 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 Gene3D G3DSA:3.40.50.1820 5 264 4.3E-63 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 SUPERFAMILY SSF53474 5 261 9.87E-65 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08950 78ec3f0509b4ad40f1960ef45be23ad7 275 PANTHER PTHR10992 1 262 3.5E-77 T 26-04-2016 PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 Gene3D G3DSA:3.90.550.10 3 270 2.6E-66 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 PANTHER PTHR22572:SF14 4 277 2.1E-103 T 26-04-2016 PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 SUPERFAMILY SSF53448 2 270 5.18E-64 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 1.9E-122 T 26-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 PANTHER PTHR22572 4 277 2.1E-103 T 26-04-2016 PAM18_RS15490 f905dea881ee33c158ecdcd1b5d4da90 279 Pfam PF00483 Nucleotidyl transferase 9 267 4.0E-31 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS18545 d9dc8ec30855b8fa85ed6bd0c8bd4c79 86 Pfam PF05488 PAAR motif 7 76 2.6E-21 T 26-04-2016 IPR008727 PAAR motif PAM18_RS18545 d9dc8ec30855b8fa85ed6bd0c8bd4c79 86 PANTHER PTHR37465 1 85 4.6E-36 T 26-04-2016 PAM18_RS00820 e45cdcee174e237638fa7a3435b64e86 444 Pfam PF03573 outer membrane porin, OprD family 29 442 2.1E-152 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS00820 e45cdcee174e237638fa7a3435b64e86 444 PANTHER PTHR34596 1 444 9.2E-174 T 26-04-2016 PAM18_RS00820 e45cdcee174e237638fa7a3435b64e86 444 Gene3D G3DSA:2.40.160.10 35 444 9.6E-138 T 26-04-2016 IPR023614 Porin domain PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 Gene3D G3DSA:3.40.640.10 3 247 9.1E-85 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 SUPERFAMILY SSF53383 4 332 2.89E-115 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 PANTHER PTHR10289 3 331 7.9E-158 T 26-04-2016 PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 Pfam PF01212 Beta-eliminating lyase 5 283 6.7E-94 T 26-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 PIRSF PIRSF017617 1 334 1.9E-133 T 26-04-2016 IPR023603 Threonine aldolase PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 PANTHER PTHR10289:SF5 3 331 7.9E-158 T 26-04-2016 PAM18_RS21135 a1aabb92b61dcb1f91f54b4940de6de9 334 Gene3D G3DSA:3.90.1150.10 248 331 3.9E-24 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 216 339 7.9E-14 T 26-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 336 2.3E-111 T 26-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:1.10.8.60 146 223 7.3E-34 T 26-04-2016 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:3.40.50.300 1 141 7.9E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 6.4E-33 T 26-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:1.20.272.20 224 339 3.0E-40 T 26-04-2016 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 PANTHER PTHR34388 1 345 1.1E-81 T 26-04-2016 PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 SUPERFAMILY SSF52540 1 211 1.31E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04830 524a5e2de4a75a114e6607229260e4ce 345 SUPERFAMILY SSF48019 213 337 3.57E-32 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PANTHER PTHR32195:SF18 4 413 4.4E-215 T 26-04-2016 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 235 254 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 20 43 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 92 112 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 330 348 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 296 315 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 158 178 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 196 218 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 47 66 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PRINTS PR00166 Aromatic amino acid permease signature 351 370 1.0E-98 T 26-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 PANTHER PTHR32195 4 413 4.4E-215 T 26-04-2016 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 Pfam PF03222 Tryptophan/tyrosine permease family 12 405 1.5E-146 T 26-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PAM18_RS28390 fc9c7b4ba510fa52fe5ab687e84d0569 417 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 17 398 2.8E-150 T 26-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 211 1.3E-40 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 1.3E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 1.3E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 SMART SM00342 254 336 3.6E-26 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 SUPERFAMILY SSF46689 289 337 4.18E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 Gene3D G3DSA:1.10.10.60 289 337 5.4E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 PANTHER PTHR11019 192 337 2.7E-36 T 26-04-2016 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12833 Helix-turn-helix domain 261 337 6.5E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21495 faf70e1d522bf27ebfbde00aaf833cd7 339 PANTHER PTHR11019:SF52 192 337 2.7E-36 T 26-04-2016 PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 SUPERFAMILY SSF103473 3 373 3.53E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 Pfam PF07690 Major Facilitator Superfamily 10 310 5.0E-36 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 Gene3D G3DSA:1.20.1250.20 4 192 2.1E-22 T 26-04-2016 PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 PANTHER PTHR23501 1 379 5.2E-120 T 26-04-2016 PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 PANTHER PTHR23501:SF4 1 379 5.2E-120 T 26-04-2016 PAM18_RS08370 b6ae9aeb607d26dfc0b8cd9b6877c3b0 388 Gene3D G3DSA:1.20.1250.20 198 372 5.1E-14 T 26-04-2016 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 Gene3D G3DSA:1.20.1090.10 186 387 1.1E-65 T 26-04-2016 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 Gene3D G3DSA:3.40.50.1970 1 185 1.2E-49 T 26-04-2016 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 PANTHER PTHR11496:SF68 1 387 1.4E-176 T 26-04-2016 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 PANTHER PTHR11496 1 387 1.4E-176 T 26-04-2016 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 378 8.7E-114 T 26-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 26-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PAM18_RS27120 ae2dfccf3fd9bbe7127ffd10d3e69f69 387 SUPERFAMILY SSF56796 2 387 6.67E-115 T 26-04-2016 PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 SUPERFAMILY SSF55594 1 88 2.22E-26 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 26-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 PANTHER PTHR33705 1 90 2.2E-41 T 26-04-2016 PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.9E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.9E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.9E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 2.2E-25 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 Pfam PF00381 PTS HPr component phosphorylation site 5 83 2.5E-26 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 PANTHER PTHR33705:SF2 1 90 2.2E-41 T 26-04-2016 PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 26-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PAM18_RS23280 b1a2478387312fb65a670dc47730f730 90 Gene3D G3DSA:3.30.1340.10 1 88 5.4E-29 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751 544 667 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751 519 527 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751 150 491 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 388 402 - T 26-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Gene3D G3DSA:3.90.1150.10 455 624 7.0E-61 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 SUPERFAMILY SSF55904 602 751 1.24E-43 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PIRSF PIRSF009393 3 751 1.3E-289 T 26-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Gene3D G3DSA:3.90.100.10 625 750 4.9E-34 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 1.4E-160 T 26-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 SUPERFAMILY SSF53383 149 599 9.48E-113 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 607 736 4.0E-49 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751:SF406 544 667 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751:SF406 519 527 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 PANTHER PTHR11751:SF406 150 491 3.1E-209 T 26-04-2016 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Gene3D G3DSA:3.40.640.10 149 452 4.0E-112 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS16525 571b92328750f918d5b5c64aade2d288 751 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 22 143 5.5E-24 T 26-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 Pfam PF02219 Methylenetetrahydrofolate reductase 4 278 3.3E-88 T 26-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 279 1.6E-100 T 26-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 SUPERFAMILY SSF51730 3 280 3.14E-95 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 PANTHER PTHR21091:SF31 137 272 3.7E-41 T 26-04-2016 PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 PANTHER PTHR21091 137 272 3.7E-41 T 26-04-2016 PAM18_RS02175 b90c5e5b68292f03f2b09e617f057bc4 282 Gene3D G3DSA:3.20.20.220 2 280 3.3E-106 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342:SF233 196 430 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342:SF233 446 525 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342:SF233 7 174 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 Gene3D G3DSA:3.30.1120.10 453 504 2.6E-9 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 SUPERFAMILY SSF53649 7 253 1.31E-114 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 SUPERFAMILY SSF53649 296 502 1.31E-114 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 Pfam PF00884 Sulfatase 8 392 4.7E-57 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342 196 430 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342 446 525 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 PANTHER PTHR10342 7 174 1.0E-289 T 26-04-2016 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 Gene3D G3DSA:3.40.720.10 290 452 1.5E-91 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 Gene3D G3DSA:3.40.720.10 8 108 1.5E-91 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS13925 9ec6d04643ff285977c41e2408607dea 538 Gene3D G3DSA:3.40.720.10 156 253 1.5E-91 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 Gene3D G3DSA:3.50.50.60 7 120 6.6E-37 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 Gene3D G3DSA:3.50.50.60 232 313 1.3E-10 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.5E-42 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 5.5E-42 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.5E-42 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.5E-42 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-42 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 26-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 SUPERFAMILY SSF51905 2 313 1.04E-55 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PANTHER PTHR22912 1 315 3.7E-160 T 26-04-2016 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 8.9E-120 T 26-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 301 5.8E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 Gene3D G3DSA:3.50.50.60 121 231 1.4E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.1E-76 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS21405 4dc6222739b353c23b2746028c5abac5 316 PANTHER PTHR22912:SF48 1 315 3.7E-160 T 26-04-2016 PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 SUPERFAMILY SSF53335 91 322 9.07E-32 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 Gene3D G3DSA:3.40.50.150 121 319 1.9E-23 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 320 1.5E-137 T 26-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 PANTHER PTHR10108 78 321 1.4E-99 T 26-04-2016 PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 Pfam PF08003 Protein of unknown function (DUF1698) 12 321 3.1E-137 T 26-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 15 321 52.998 T 26-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 PAM18_RS21770 81efaa713fa7d8afdf9174b93f98d877 322 PANTHER PTHR10108:SF847 78 321 1.4E-99 T 26-04-2016 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Pfam PF00158 Sigma-54 interaction domain 146 313 3.9E-76 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.10.60 429 480 7.6E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 461 1.6E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 461 481 1.6E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.8.60 319 392 1.4E-20 T 26-04-2016 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:3.40.50.300 143 318 1.0E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 PANTHER PTHR32071 1 490 1.2E-291 T 26-04-2016 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 SMART SM00382 166 310 8.6E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52172 3 188 8.08E-10 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF46689 434 480 1.7E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52540 146 387 4.57E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Pfam PF02954 Bacterial regulatory protein, Fis family 438 478 1.9E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 Pfam PF06490 Flagellar regulatory protein FleQ 6 123 4.9E-30 T 26-04-2016 IPR010518 Flagellar regulatory FleQ PAM18_RS20105 8062ef7305f5987b36d342680dedd65b 490 PANTHER PTHR32071:SF36 1 490 1.2E-291 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 8 130 4.4E-40 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PANTHER PTHR22931:SF15 315 820 1.7E-287 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Gene3D G3DSA:3.50.30.10 411 528 9.6E-29 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 527 811 2.6E-95 T 26-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Gene3D G3DSA:2.70.70.10 2 151 1.1E-47 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 185 192 - T 26-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Pfam PF00381 PTS HPr component phosphorylation site 178 254 3.3E-18 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 70 82 - T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 717 735 - T 26-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 9 128 6.3E-37 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR00107 Phosphocarrier protein signature 225 242 2.2E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR00107 Phosphocarrier protein signature 210 225 2.2E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR00107 Phosphocarrier protein signature 185 201 2.2E-10 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Pfam PF00391 PEP-utilising enzyme, mobile domain 427 500 8.5E-18 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 SUPERFAMILY SSF51621 530 819 3.93E-96 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 SUPERFAMILY SSF55594 178 255 3.66E-19 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 211 226 - T 26-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Gene3D G3DSA:3.20.20.60 532 834 3.8E-96 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 178 253 1.2E-17 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Gene3D G3DSA:3.30.1340.10 177 255 6.6E-21 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 SUPERFAMILY SSF47831 313 420 2.88E-24 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Gene3D G3DSA:1.10.274.10 312 410 1.1E-26 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 SUPERFAMILY SSF51261 2 150 1.92E-47 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 316 832 3.9E-129 T 26-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 SUPERFAMILY SSF52009 402 514 6.28E-26 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 Pfam PF05524 PEP-utilising enzyme, N-terminal 285 403 7.5E-21 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PANTHER PTHR22931 315 820 1.7E-287 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 770 782 8.9E-20 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 734 749 8.9E-20 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 568 587 8.9E-20 T 26-04-2016 PAM18_RS06005 bb018941d431258146c80bbef82474ac 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 717 732 8.9E-20 T 26-04-2016 PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 Pfam PF09364 XFP N-terminal domain 66 307 3.5E-14 T 26-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 434 604 1.3E-42 T 26-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 PANTHER PTHR31273 18 801 0.0 T 26-04-2016 PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 PANTHER PTHR31273:SF0 18 801 0.0 T 26-04-2016 PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 SUPERFAMILY SSF52518 422 620 3.83E-7 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 PIRSF PIRSF017245 26 801 2.0E-227 T 26-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 PAM18_RS07065 0d3d15ea9030762a98b054350db31049 801 SUPERFAMILY SSF52518 81 387 1.14E-20 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 121 240 8.2E-37 T 26-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Gene3D G3DSA:1.10.287.90 23 109 3.2E-24 T 26-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PANTHER PTHR22888:SF2 1 295 2.9E-136 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 274 348 1.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 SUPERFAMILY SSF46626 221 358 9.88E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 235 - T 26-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 32 251 6.0E-59 T 26-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Gene3D G3DSA:1.10.760.10 288 373 1.2E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 SUPERFAMILY SSF49503 116 257 7.5E-54 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 23 104 7.1E-13 T 26-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 SUPERFAMILY SSF81464 12 112 4.74E-25 T 26-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 162 183 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 134 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 186 206 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 113 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 1.42E-39 T 26-04-2016 PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 Gene3D G3DSA:2.60.40.420 110 287 4.3E-58 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS00535 a0027a2fd5a7f646b8bb4809e82ac46a 374 PANTHER PTHR22888 1 295 2.9E-136 T 26-04-2016 PAM18_RS29085 d860cbf01aadc977b6dc6d33f26e6936 262 Gene3D G3DSA:3.40.50.300 3 254 2.2E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29085 d860cbf01aadc977b6dc6d33f26e6936 262 SUPERFAMILY SSF52540 1 253 1.32E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29085 d860cbf01aadc977b6dc6d33f26e6936 262 Pfam PF13614 AAA domain 3 178 3.5E-64 T 26-04-2016 IPR025669 AAA domain PAM18_RS29085 d860cbf01aadc977b6dc6d33f26e6936 262 PANTHER PTHR13696:SF52 1 261 6.8E-92 T 26-04-2016 PAM18_RS29085 d860cbf01aadc977b6dc6d33f26e6936 262 PANTHER PTHR13696 1 261 6.8E-92 T 26-04-2016 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 8.3E-19 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 SMART SM00382 39 231 7.8E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 316 3.8E-26 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 SUPERFAMILY SSF52540 5 253 4.71E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 Pfam PF00005 ABC transporter 30 182 1.5E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 Gene3D G3DSA:3.40.50.300 3 255 3.9E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 PANTHER PTHR24220 6 316 1.0E-198 T 26-04-2016 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23480 6260528cafee6c152dc5773d9877034e 323 PANTHER PTHR24220:SF493 6 316 1.0E-198 T 26-04-2016 PAM18_RS08775 35423628047c5795295414fbf817195b 103 SUPERFAMILY SSF47413 49 98 9.92E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS08775 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:3.40.1620.10 4 26 2.2E-4 T 26-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PAM18_RS08775 35423628047c5795295414fbf817195b 103 Pfam PF01381 Helix-turn-helix 51 99 3.4E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS08775 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:1.10.260.40 50 98 1.2E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS08775 35423628047c5795295414fbf817195b 103 SMART SM00530 49 103 1.0E-9 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 173.666 T 26-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Gene3D G3DSA:3.30.470.20 193 299 2.0E-50 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 SUPERFAMILY SSF52440 3 123 1.93E-42 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 1.7E-135 T 26-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 PANTHER PTHR21621 1 317 5.5E-166 T 26-04-2016 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 5.3E-44 T 26-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Gene3D G3DSA:3.40.50.20 4 131 1.4E-51 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 SUPERFAMILY SSF56059 124 311 2.83E-57 T 26-04-2016 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 PANTHER PTHR21621:SF4 1 317 5.5E-166 T 26-04-2016 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Gene3D G3DSA:3.30.1490.20 138 192 7.3E-29 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS02060 afdd44ba7772ded7612a7405a64bd5c2 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.1E-79 T 26-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 PANTHER PTHR11124 2 150 1.0E-35 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 145 1.9E-24 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 Gene3D G3DSA:3.60.21.10 2 145 5.6E-32 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 SUPERFAMILY SSF56300 2 150 9.2E-35 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 96 120 - T 26-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- PAM18_RS01770 1087c7d35ba5a5866fbc328a3ed719b5 150 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 138 3.4E-31 T 26-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 3.4E-11 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 PANTHER PTHR10909:SF296 1 477 3.6E-275 T 26-04-2016 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 SUPERFAMILY SSF47203 289 459 2.09E-47 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 SUPERFAMILY SSF56645 38 281 2.62E-56 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Gene3D G3DSA:2.40.110.10 162 268 1.3E-27 T 26-04-2016 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 PANTHER PTHR10909 1 477 3.6E-275 T 26-04-2016 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 3.0E-21 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Gene3D G3DSA:1.20.140.10 269 458 3.3E-51 T 26-04-2016 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 158 4.1E-11 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Gene3D G3DSA:1.10.540.10 38 160 1.4E-14 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.1E-17 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS03775 a57e6a05abd0117dd3ea69707ae700bd 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 587 1.9E-34 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 Gene3D G3DSA:3.40.50.2020 3 188 2.6E-64 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 PANTHER PTHR11776:SF1 2 188 2.9E-86 T 26-04-2016 PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 188 1.9E-83 T 26-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 PANTHER PTHR11776 2 188 2.9E-86 T 26-04-2016 PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 Pfam PF00156 Phosphoribosyl transferase domain 31 156 1.1E-7 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.963 T 26-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 PAM18_RS27685 62c28b87f8b64d690197b33f6ebb4102 190 SUPERFAMILY SSF53271 2 188 2.41E-45 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 Gene3D G3DSA:3.40.640.10 157 380 1.1E-59 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 PANTHER PTHR11751 109 490 9.7E-204 T 26-04-2016 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 7.4E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 7.4E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 Pfam PF00155 Aminotransferase class I and II 165 368 4.5E-18 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 9.0E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 PANTHER PTHR11751:SF407 109 490 9.7E-204 T 26-04-2016 PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 SUPERFAMILY SSF46785 19 91 1.36E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 SUPERFAMILY SSF53383 133 491 5.35E-83 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 Gene3D G3DSA:1.10.10.10 22 89 1.5E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03945 f9030bb3d09d041aca84352f47bc4648 496 SMART SM00345 28 87 2.7E-15 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 SUPERFAMILY SSF54001 113 253 2.65E-14 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 PANTHER PTHR34858:SF1 223 256 4.4E-67 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 PANTHER PTHR34858:SF1 1 206 4.4E-67 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 Gene3D G3DSA:3.40.140.10 2 124 2.5E-25 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 Gene3D G3DSA:3.90.1720.10 125 254 2.1E-15 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 SMART SM00232 1 127 4.4E-5 T 26-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 Pfam PF00877 NlpC/P60 family 119 250 1.1E-19 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 100 1.7E-18 T 26-04-2016 IPR028090 JAB domain, prokaryotic PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 SUPERFAMILY SSF102712 1 139 1.7E-24 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 PANTHER PTHR34858 223 256 4.4E-67 T 26-04-2016 PAM18_RS03165 23f71c763bff78080cdd37cf6ee4318e 256 PANTHER PTHR34858 1 206 4.4E-67 T 26-04-2016 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 4.4E-20 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 Pfam PF00593 TonB dependent receptor 428 685 1.8E-23 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 PANTHER PTHR30069:SF13 12 477 0.0 T 26-04-2016 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 Gene3D G3DSA:2.170.130.10 35 156 1.3E-24 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 PANTHER PTHR30069 12 477 0.0 T 26-04-2016 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 SUPERFAMILY SSF56935 55 687 1.1E-94 T 26-04-2016 PAM18_RS21735 6460382dd13b19f1ed9a47eb1f117ebd 687 Gene3D G3DSA:2.40.170.20 157 687 2.0E-69 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 PANTHER PTHR30537 1 304 6.8E-156 T 26-04-2016 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 PANTHER PTHR30537:SF27 1 304 6.8E-156 T 26-04-2016 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 91 175 4.8E-23 T 26-04-2016 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.1E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 176 253 8.8E-20 T 26-04-2016 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 Pfam PF03466 LysR substrate binding domain 87 286 6.2E-47 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF53850 89 287 1.26E-47 T 26-04-2016 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF46785 1 87 1.33E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09370 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:1.10.10.10 2 87 1.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 SUPERFAMILY SSF90123 16 323 1.31E-72 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 PANTHER PTHR24221 8 583 1.0E-227 T 26-04-2016 PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 Gene3D G3DSA:3.40.50.300 344 575 2.5E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 Pfam PF00664 ABC transporter transmembrane region 30 297 1.1E-50 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 SMART SM00382 372 574 1.4E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 SUPERFAMILY SSF52540 338 583 1.04E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 9 583 6.9E-286 T 26-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 Gene3D G3DSA:1.20.1560.10 17 323 3.9E-77 T 26-04-2016 PAM18_RS20015 d5e1357654eaf006b199c27e57299ec9 588 Pfam PF00005 ABC transporter 364 512 9.4E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 Pfam PF10262 Rdx family 8 80 2.1E-32 T 26-04-2016 IPR011893 Selenoprotein, Rdx type PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 8 79 1.2E-22 T 26-04-2016 IPR011893 Selenoprotein, Rdx type PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 PANTHER PTHR36417 1 95 1.0E-66 T 26-04-2016 PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 Gene3D G3DSA:3.40.30.10 3 94 1.1E-44 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 SUPERFAMILY SSF52833 6 89 3.35E-28 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS08360 d059711350a6241ac774e5238fea74b1 96 PANTHER PTHR36417:SF1 1 95 1.0E-66 T 26-04-2016 PAM18_RS05875 0e09f53af6fca18d8de6a999d678c9d3 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 4.8E-102 T 26-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PAM18_RS05875 0e09f53af6fca18d8de6a999d678c9d3 425 PANTHER PTHR33362 1 425 2.9E-205 T 26-04-2016 PAM18_RS05875 0e09f53af6fca18d8de6a999d678c9d3 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 421 3.4E-116 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS05875 0e09f53af6fca18d8de6a999d678c9d3 425 PANTHER PTHR33362:SF2 1 425 2.9E-205 T 26-04-2016 PAM18_RS05875 0e09f53af6fca18d8de6a999d678c9d3 425 PIRSF PIRSF006066 1 425 8.1E-140 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS09875 212c544d287f7bafce0a4d924f35e74d 421 PANTHER PTHR34596 1 421 1.6E-188 T 26-04-2016 PAM18_RS09875 212c544d287f7bafce0a4d924f35e74d 421 Pfam PF03573 outer membrane porin, OprD family 28 419 6.5E-166 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS09875 212c544d287f7bafce0a4d924f35e74d 421 Gene3D G3DSA:2.40.160.10 32 421 4.4E-160 T 26-04-2016 IPR023614 Porin domain PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.8E-41 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:2.40.110.10 126 221 2.7E-41 T 26-04-2016 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 1.0E-37 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:1.10.540.10 4 125 5.1E-45 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 PIRSF PIRSF016578 12 387 7.8E-15 T 26-04-2016 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 5.7E-28 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 PANTHER PTHR10909:SF326 6 387 0.0 T 26-04-2016 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:1.20.140.10 222 386 2.2E-65 T 26-04-2016 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 PANTHER PTHR10909 6 387 0.0 T 26-04-2016 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 SUPERFAMILY SSF47203 233 385 6.28E-46 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS15535 3afe3ea853be6511fb1508cbefc0cee3 387 SUPERFAMILY SSF56645 5 247 5.1E-87 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:2.40.30.10 197 292 5.1E-22 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.240 404 492 5.1E-20 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 175 3.0E-18 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.870 294 372 1.7E-26 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 2.7E-295 T 26-04-2016 IPR006297 Elongation factor 4 GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 3.7E-51 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00679 Elongation factor G C-terminus 402 487 7.3E-19 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 302.884 T 26-04-2016 IPR006297 Elongation factor 4 GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF52540 3 235 5.7E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 295 373 1.47E-18 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PANTHER PTHR23115 400 598 5.1E-278 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PANTHER PTHR23115 7 376 5.1E-278 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.8E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.8E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.8E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.8E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.8E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 1.0E-50 T 26-04-2016 IPR013842 GTP-binding protein LepA, C-terminal PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.40.50.300 4 196 1.8E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.1E-10 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 403 496 4.65E-24 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PANTHER PTHR23115:SF175 400 598 5.1E-278 T 26-04-2016 PAM18_RS21805 e2fbd012fd7dcc8c3de2da414169ebe4 599 PANTHER PTHR23115:SF175 7 376 5.1E-278 T 26-04-2016 PAM18_RS25120 d3ba9f5932055d8b7129f24a0eb05358 242 PANTHER PTHR34822 5 242 1.8E-66 T 26-04-2016 PAM18_RS25120 d3ba9f5932055d8b7129f24a0eb05358 242 Gene3D G3DSA:3.30.460.10 20 186 1.0E-51 T 26-04-2016 PAM18_RS25120 d3ba9f5932055d8b7129f24a0eb05358 242 Pfam PF04229 GrpB protein 22 182 5.8E-49 T 26-04-2016 IPR007344 GrpB/Dephospho-CoA kinase PAM18_RS25120 d3ba9f5932055d8b7129f24a0eb05358 242 SUPERFAMILY SSF81301 24 186 4.25E-46 T 26-04-2016 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 Gene3D G3DSA:1.10.150.120 75 151 3.3E-29 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 SUPERFAMILY SSF47741 73 151 4.06E-30 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 Pfam PF01799 [2Fe-2S] binding domain 73 144 3.7E-25 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 59 8.0E-9 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 SUPERFAMILY SSF54292 2 78 7.73E-26 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 PANTHER PTHR11908:SF82 1 137 9.7E-32 T 26-04-2016 PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 Gene3D G3DSA:3.10.20.30 2 74 2.3E-29 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS16195 164701c37ea6952ef8a6ee31559e9080 153 PANTHER PTHR11908 1 137 9.7E-32 T 26-04-2016 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 SUPERFAMILY SSF46785 3 68 2.46E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 Gene3D G3DSA:3.30.750.70 72 147 1.1E-14 T 26-04-2016 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 SMART SM01134 72 232 2.3E-72 T 26-04-2016 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.9E-21 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 PANTHER PTHR30363 1 251 1.2E-110 T 26-04-2016 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 26-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 SMART SM00420 6 58 3.9E-22 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 SUPERFAMILY SSF100950 74 232 4.95E-31 T 26-04-2016 PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 Gene3D G3DSA:1.10.10.10 1 66 4.4E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.8E-53 T 26-04-2016 IPR014036 DeoR C-terminal sensor domain PAM18_RS07215 197dd71f444d0bac84a8f87be5cb3a53 251 PANTHER PTHR30363:SF1 1 251 1.2E-110 T 26-04-2016 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.10.60 4 40 1.9E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 PANTHER PTHR30055 1 163 1.2E-73 T 26-04-2016 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF46689 3 80 1.03E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.2E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.2E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 1.7E-16 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF48498 76 200 6.43E-43 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.357.10 63 200 3.7E-55 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 PANTHER PTHR30055:SF53 1 163 1.2E-73 T 26-04-2016 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.10.60 41 62 2.9E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18565 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 8.8E-62 T 26-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PAM18_RS08895 72b1692138093c6e467f4e807a46aeaf 73 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 8.0E-22 T 26-04-2016 IPR018638 Domain of unknown function DUF2061, membrane PAM18_RS03925 34b030d04c8897d8a2c2930ffa6c3e3a 142 Pfam PF02082 Transcriptional regulator 1 81 3.7E-24 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type PAM18_RS03925 34b030d04c8897d8a2c2930ffa6c3e3a 142 PANTHER PTHR33221 2 142 1.1E-81 T 26-04-2016 PAM18_RS03925 34b030d04c8897d8a2c2930ffa6c3e3a 142 SUPERFAMILY SSF46785 5 131 4.49E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03925 34b030d04c8897d8a2c2930ffa6c3e3a 142 PANTHER PTHR33221:SF7 2 142 1.1E-81 T 26-04-2016 PAM18_RS03925 34b030d04c8897d8a2c2930ffa6c3e3a 142 Gene3D G3DSA:1.10.10.10 1 139 1.8E-44 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 32 467 2.9E-174 T 26-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 Pfam PF00202 Aminotransferase class-III 49 463 3.5E-88 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 PANTHER PTHR11986 27 463 4.8E-205 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 Gene3D G3DSA:3.40.640.10 85 338 2.9E-69 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 Gene3D G3DSA:3.90.1150.10 339 465 5.6E-49 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 PANTHER PTHR11986:SF7 27 463 4.8E-205 T 26-04-2016 PAM18_RS13525 905a1efe1dcac3f23ae45e781f5ca58c 469 SUPERFAMILY SSF53383 39 463 3.79E-115 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 PANTHER PTHR10909 2 473 3.0E-259 T 26-04-2016 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 SUPERFAMILY SSF56645 39 276 1.13E-55 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Gene3D G3DSA:1.20.140.10 267 458 1.5E-54 T 26-04-2016 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 451 2.4E-23 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 268 6.6E-18 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 SUPERFAMILY SSF47203 284 456 1.93E-46 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 PANTHER PTHR10909:SF296 2 473 3.0E-259 T 26-04-2016 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 45 155 1.6E-12 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Gene3D G3DSA:2.40.110.10 158 266 9.9E-27 T 26-04-2016 PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 26 4.0E-10 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 476 590 1.5E-29 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS27125 12566ef87600a00cd6b0b0b29ce92ed1 596 Gene3D G3DSA:1.10.540.10 40 156 1.8E-16 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 PANTHER PTHR10108:SF234 311 357 3.0E-34 T 26-04-2016 PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 PANTHER PTHR10108:SF234 142 295 3.0E-34 T 26-04-2016 PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF46785 27 91 9.42E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:1.10.10.10 40 92 3.8E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:3.40.50.150 173 338 3.0E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 PANTHER PTHR10108 311 357 3.0E-34 T 26-04-2016 PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 PANTHER PTHR10108 142 295 3.0E-34 T 26-04-2016 PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF53335 151 348 2.28E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07570 619bb603c8d275e187d32b7d42d3e8ab 357 Pfam PF13847 Methyltransferase domain 176 334 2.3E-21 T 26-04-2016 IPR025714 Methyltransferase domain PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 PANTHER PTHR11808 264 425 2.4E-257 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 PANTHER PTHR11808 1 234 2.4E-257 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 PIRSF PIRSF001434 1 424 1.4E-135 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 SUPERFAMILY SSF53383 1 421 4.47E-134 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 Gene3D G3DSA:3.40.640.10 2 285 1.8E-125 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 PANTHER PTHR11808:SF12 264 425 2.4E-257 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 PANTHER PTHR11808:SF12 1 234 2.4E-257 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 Gene3D G3DSA:3.90.1150.10 287 423 2.1E-49 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.5E-143 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS26290 c69e112c281014cbd34053bc42e25c06 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 1.0E-207 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 PAM18_RS08930 0e3a716a1fc24f6ec0bd6f49431726fd 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 373 5.4E-148 T 26-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition PAM18_RS08930 0e3a716a1fc24f6ec0bd6f49431726fd 374 SUPERFAMILY SSF55729 174 344 2.28E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08930 0e3a716a1fc24f6ec0bd6f49431726fd 374 PANTHER PTHR31384 21 306 4.0E-59 T 26-04-2016 PAM18_RS08930 0e3a716a1fc24f6ec0bd6f49431726fd 374 Gene3D G3DSA:3.40.630.30 174 322 1.9E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS23245 beaff7eaa9639a33ed04ece7c9ebd587 190 PANTHER PTHR37481 2 190 4.7E-68 T 26-04-2016 PAM18_RS23245 beaff7eaa9639a33ed04ece7c9ebd587 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 188 6.3E-52 T 26-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related PAM18_RS23245 beaff7eaa9639a33ed04ece7c9ebd587 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 186 2.2E-52 T 26-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PAM18_RS23245 beaff7eaa9639a33ed04ece7c9ebd587 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 5 190 25.906 T 26-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PAM18_RS23245 beaff7eaa9639a33ed04ece7c9ebd587 190 PANTHER PTHR37481:SF1 2 190 4.7E-68 T 26-04-2016 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF54909 65 146 5.77E-19 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 PANTHER PTHR30154 1 151 9.9E-68 T 26-04-2016 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 3.3E-22 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 PANTHER PTHR30154:SF28 1 151 9.9E-68 T 26-04-2016 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:3.30.70.920 56 147 1.3E-25 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:1.10.10.10 4 54 2.2E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 SMART SM00344 3 112 3.1E-42 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.1E-19 T 26-04-2016 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF46785 2 62 3.95E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.6E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.6E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS15190 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.6E-15 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS06510 fc266c6cb3e6021e682136c03518a9ba 553 Pfam PF00999 Sodium/hydrogen exchanger family 7 419 2.5E-84 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS06510 fc266c6cb3e6021e682136c03518a9ba 553 PANTHER PTHR10110:SF120 1 542 3.7E-207 T 26-04-2016 PAM18_RS06510 fc266c6cb3e6021e682136c03518a9ba 553 PANTHER PTHR10110 1 542 3.7E-207 T 26-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 PAM18_RS06510 fc266c6cb3e6021e682136c03518a9ba 553 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 545 2.8E-127 T 26-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 4.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 4.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 4.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 Gene3D G3DSA:1.10.10.10 122 210 4.3E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 PANTHER PTHR26402:SF511 2 210 6.6E-79 T 26-04-2016 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 SUPERFAMILY SSF46894 146 211 1.7E-16 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 SMART SM00448 2 116 2.3E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 SMART SM00421 153 210 1.9E-18 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 Gene3D G3DSA:3.40.50.2300 1 121 9.8E-29 T 26-04-2016 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 SUPERFAMILY SSF52172 1 131 4.7E-28 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 Pfam PF00072 Response regulator receiver domain 4 117 4.3E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 PANTHER PTHR26402 2 210 6.6E-79 T 26-04-2016 PAM18_RS15720 ef238751d5931b4d66f1021cf5779b51 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 3.0E-20 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS08325 1b5f01e6e04daf9f8893278bffc47d6c 116 SUPERFAMILY SSF47226 3 113 4.84E-26 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS08325 1b5f01e6e04daf9f8893278bffc47d6c 116 Pfam PF01627 Hpt domain 25 100 1.5E-14 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS08325 1b5f01e6e04daf9f8893278bffc47d6c 116 Gene3D G3DSA:1.20.120.160 3 111 5.2E-30 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 683 3.2E-245 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 683 25.437 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PANTHER PTHR30075 1 684 0.0 T 26-04-2016 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 Gene3D G3DSA:1.10.730.10 578 671 8.9E-4 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 Pfam PF05746 DALR anticodon binding domain 577 671 1.2E-6 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 SUPERFAMILY SSF109604 334 485 2.04E-17 T 26-04-2016 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 SMART SM00836 580 683 0.0029 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.6E-35 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 2.6E-35 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 389 408 2.6E-35 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 2.6E-35 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 2.6E-35 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00040 713cb557cf4b126bb2c1b98476da62af 684 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 545 5.2E-206 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 42 192 1.1E-44 T 26-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 Gene3D G3DSA:3.40.50.20 254 309 5.9E-4 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 SUPERFAMILY SSF56059 292 500 6.68E-35 T 26-04-2016 PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 Gene3D G3DSA:3.30.1490.20 313 382 7.8E-8 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 Pfam PF08443 RimK-like ATP-grasp domain 302 478 2.8E-5 T 26-04-2016 IPR013651 ATP-grasp fold, RimK-type PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 PANTHER PTHR11609 178 508 7.2E-171 T 26-04-2016 PAM18_RS18220 05cd15bae4c7a50b94fc2d41071fda59 515 PANTHER PTHR11609:SF4 178 508 7.2E-171 T 26-04-2016 PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 SUPERFAMILY SSF53474 8 300 3.6E-44 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PANTHER PTHR24322 475 507 1.0E-49 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PANTHER PTHR24322 330 459 1.0E-49 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 475 494 1.0E-20 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 327 344 1.0E-20 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 449 465 1.0E-20 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 401 412 1.0E-20 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 496 513 1.0E-20 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 Pfam PF00106 short chain dehydrogenase 326 516 6.3E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 Gene3D G3DSA:3.40.50.1820 12 300 5.8E-46 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 475 494 4.1E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 455 463 4.1E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 401 412 4.1E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 SUPERFAMILY SSF51735 321 587 5.18E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 462 490 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 Gene3D G3DSA:3.40.50.720 325 566 1.2E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08430 bdb5a27e9b24573ac7ca66afc1b47097 592 Pfam PF00561 alpha/beta hydrolase fold 37 121 7.0E-17 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 905 2.3E-182 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 6.2E-22 T 26-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Pfam PF03477 ATP cone domain 149 233 7.5E-8 T 26-04-2016 IPR005144 ATP-cone domain PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Pfam PF03477 ATP cone domain 33 128 2.5E-18 T 26-04-2016 IPR005144 ATP-cone domain PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Gene3D G3DSA:3.20.70.20 282 492 2.7E-81 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Gene3D G3DSA:3.20.70.20 760 805 2.7E-81 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Gene3D G3DSA:3.20.70.20 866 907 2.7E-81 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 Gene3D G3DSA:3.20.70.20 547 704 2.7E-81 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF48168 154 369 4.45E-64 T 26-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 907 3.0E-216 T 26-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF51998 840 907 5.8E-182 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF51998 370 809 5.8E-182 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PANTHER PTHR11573 150 963 0.0 T 26-04-2016 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 618 641 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 684 707 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS19810 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 656 678 4.3E-48 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PANTHER PTHR30128 129 311 4.6E-40 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 SUPERFAMILY SSF103088 149 278 5.89E-30 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS07515 5876879e83775c19233919aca0927d50 321 Gene3D G3DSA:3.30.1330.60 174 279 3.2E-29 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 261 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 224 241 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 39 57 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 77 95 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 138 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 262 282 7.3E-20 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 PANTHER PTHR30128:SF11 129 311 4.6E-40 T 26-04-2016 PAM18_RS07515 5876879e83775c19233919aca0927d50 321 Pfam PF00691 OmpA family 178 273 7.2E-19 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS12015 6eae156846d8cb4911a2765465635a3d 171 Gene3D G3DSA:3.10.129.10 16 160 2.1E-44 T 26-04-2016 IPR029069 HotDog domain PAM18_RS12015 6eae156846d8cb4911a2765465635a3d 171 Pfam PF14539 Domain of unknown function (DUF4442) 24 159 1.2E-33 T 26-04-2016 IPR027961 Protein of unknown function DUF4442 PAM18_RS12015 6eae156846d8cb4911a2765465635a3d 171 SUPERFAMILY SSF54637 26 163 7.46E-20 T 26-04-2016 IPR029069 HotDog domain PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PANTHER PTHR23115 73 346 2.0E-73 T 26-04-2016 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PANTHER PTHR23115 10 51 2.0E-73 T 26-04-2016 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Gene3D G3DSA:3.40.50.300 449 633 2.2E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 SUPERFAMILY SSF50447 243 328 3.98E-25 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Pfam PF00009 Elongation factor Tu GTP binding domain 23 225 2.5E-44 T 26-04-2016 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 SUPERFAMILY SSF52540 463 629 1.74E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Gene3D G3DSA:2.40.30.10 331 434 4.5E-6 T 26-04-2016 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.1E-13 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.1E-13 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.1E-13 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.1E-13 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.1E-13 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 SUPERFAMILY SSF52540 17 234 1.24E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 463 631 32.412 T 26-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 460 55.167 T 26-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 451 627 2.4E-41 T 26-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 2.4E-14 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 SUPERFAMILY SSF50465 331 433 1.97E-33 T 26-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Gene3D G3DSA:2.40.30.10 243 327 1.3E-16 T 26-04-2016 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 1.5E-205 T 26-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Gene3D G3DSA:3.40.50.300 15 234 2.5E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23160 2816099e93c4dcc727435dd54a673e3d 633 Pfam PF01583 Adenylylsulphate kinase 464 614 1.8E-52 T 26-04-2016 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 PANTHER PTHR22642:SF9 1 580 0.0 T 26-04-2016 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 Pfam PF07969 Amidohydrolase family 71 576 6.3E-75 T 26-04-2016 IPR013108 Amidohydrolase 3 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 Gene3D G3DSA:2.30.40.10 22 111 2.4E-19 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 SUPERFAMILY SSF51338 22 83 1.05E-24 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 SUPERFAMILY SSF51338 535 577 1.05E-24 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 PANTHER PTHR22642 1 580 0.0 T 26-04-2016 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 Gene3D G3DSA:3.20.20.140 522 576 1.1E-10 T 26-04-2016 PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 SUPERFAMILY SSF51556 82 146 1.06E-30 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 SUPERFAMILY SSF51556 226 536 1.06E-30 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS13310 4657127988c38bc6e49ee27e95dc0d53 580 Gene3D G3DSA:3.20.20.140 228 521 1.9E-22 T 26-04-2016 PAM18_RS04285 1caaa87e302e4a29bcb73647bff84733 434 PANTHER PTHR37944 1 428 4.3E-166 T 26-04-2016 PAM18_RS04285 1caaa87e302e4a29bcb73647bff84733 434 Pfam PF04966 Carbohydrate-selective porin, OprB family 64 427 5.4E-68 T 26-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PAM18_RS04285 1caaa87e302e4a29bcb73647bff84733 434 PANTHER PTHR37944:SF1 1 428 4.3E-166 T 26-04-2016 PAM18_RS04850 b49ff22e8ad9490100bb37a23b39f3db 253 PANTHER PTHR30336 1 253 6.2E-61 T 26-04-2016 PAM18_RS04850 b49ff22e8ad9490100bb37a23b39f3db 253 PANTHER PTHR30336:SF1 1 253 6.2E-61 T 26-04-2016 PAM18_RS04850 b49ff22e8ad9490100bb37a23b39f3db 253 Pfam PF02698 DUF218 domain 81 243 9.7E-27 T 26-04-2016 IPR003848 Domain of unknown function DUF218 PAM18_RS04850 b49ff22e8ad9490100bb37a23b39f3db 253 Gene3D G3DSA:3.40.50.620 78 212 1.1E-35 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS28675 289cc62501fca510e84963380de3a661 211 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS28675 289cc62501fca510e84963380de3a661 211 Pfam PF01323 DSBA-like thioredoxin domain 96 182 3.9E-15 T 26-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PAM18_RS28675 289cc62501fca510e84963380de3a661 211 Gene3D G3DSA:3.40.30.10 22 204 5.9E-59 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS28675 289cc62501fca510e84963380de3a661 211 SUPERFAMILY SSF52833 25 203 4.03E-45 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS28675 289cc62501fca510e84963380de3a661 211 PIRSF PIRSF001488 1 209 9.8E-78 T 26-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PAM18_RS28675 289cc62501fca510e84963380de3a661 211 PANTHER PTHR35891 1 211 3.7E-91 T 26-04-2016 PAM18_RS28675 289cc62501fca510e84963380de3a661 211 PANTHER PTHR35891:SF2 1 211 3.7E-91 T 26-04-2016 PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 PANTHER PTHR11751:SF301 9 382 1.4E-154 T 26-04-2016 PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 SUPERFAMILY SSF53383 2 381 5.72E-104 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 Gene3D G3DSA:3.90.1150.10 266 379 1.5E-17 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 Pfam PF00155 Aminotransferase class I and II 27 379 6.9E-61 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 Gene3D G3DSA:3.40.640.10 39 265 1.1E-78 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS05785 3cd5cbf28ffaecc5a521ec96945abbfe 382 PANTHER PTHR11751 9 382 1.4E-154 T 26-04-2016 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 SUPERFAMILY SSF49584 139 231 1.7E-14 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PANTHER PTHR30251 1 236 8.9E-130 T 26-04-2016 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 SUPERFAMILY SSF49354 19 145 1.41E-36 T 26-04-2016 IPR008962 PapD-like PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 228 5.4E-12 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PRINTS PR00969 Pili chaperone signature 23 32 2.3E-28 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PRINTS PR00969 Pili chaperone signature 72 93 2.3E-28 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PRINTS PR00969 Pili chaperone signature 100 117 2.3E-28 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PRINTS PR00969 Pili chaperone signature 162 177 2.3E-28 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PRINTS PR00969 Pili chaperone signature 127 142 2.3E-28 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 Gene3D G3DSA:2.60.40.1070 149 234 1.1E-14 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 Gene3D G3DSA:2.60.40.360 22 145 2.9E-35 T 26-04-2016 IPR008962 PapD-like PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 PANTHER PTHR30251:SF7 1 236 8.9E-130 T 26-04-2016 PAM18_RS14930 b11a1ba4a8bf5f5e01a7f56be559be0b 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 145 1.0E-36 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 271 1.4E-68 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 SMART SM00062 28 257 0.0056 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 Gene3D G3DSA:3.40.190.10 131 231 9.3E-14 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 244 2.2E-77 T 26-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 SUPERFAMILY SSF53850 51 233 2.61E-41 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 PANTHER PTHR30024:SF17 1 240 3.1E-73 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 Gene3D G3DSA:3.40.190.10 51 130 9.7E-6 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 PANTHER PTHR30024 1 240 3.1E-73 T 26-04-2016 PAM18_RS08485 8875deb5096a7c98641f6bf5c96ac514 285 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 29 285 1.6E-113 T 26-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 122 1.9E-29 T 26-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 PANTHER PTHR10851 1 215 3.0E-115 T 26-04-2016 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 26-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 8.0E-90 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 PANTHER PTHR10851:SF0 1 215 3.0E-115 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 215 7.3E-19 T 26-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 40.409 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 Gene3D G3DSA:2.30.110.10 17 215 4.8E-89 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 SUPERFAMILY SSF50475 8 215 2.06E-71 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS20405 e501397e041cddac5d3d9af9e0bb2e34 215 PIRSF PIRSF000190 1 215 5.9E-83 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS18405 74c71218bbe416168598b6336f2decce 174 PIRSF PIRSF029393 1 172 3.2E-82 T 26-04-2016 IPR016917 Uncharacterised conserved protein UCP029393 PAM18_RS18405 74c71218bbe416168598b6336f2decce 174 Pfam PF11157 Protein of unknown function (DUF2937) 2 159 4.7E-62 T 26-04-2016 IPR022584 Protein of unknown function DUF2937 PAM18_RS12850 199c9ed38fb599a78e0af2f9dedcaaa1 141 PANTHER PTHR10374 1 140 1.6E-72 T 26-04-2016 PAM18_RS12850 199c9ed38fb599a78e0af2f9dedcaaa1 141 PANTHER PTHR10374:SF9 1 140 1.6E-72 T 26-04-2016 PAM18_RS12850 199c9ed38fb599a78e0af2f9dedcaaa1 141 SUPERFAMILY SSF54593 8 132 5.1E-27 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS12850 199c9ed38fb599a78e0af2f9dedcaaa1 141 Gene3D G3DSA:3.10.180.10 10 133 1.9E-28 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS12850 199c9ed38fb599a78e0af2f9dedcaaa1 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 132 1.9E-13 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF46785 3 74 6.27E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00895 90 214 1.9E-21 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.20.120.530 85 219 2.6E-30 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 4.1E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00345 11 70 1.7E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.8E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.8E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF48008 88 218 2.88E-28 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.10.10.10 4 74 7.1E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF07729 FCD domain 90 213 2.0E-28 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS00610 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PANTHER PTHR11751 11 106 2.2E-21 T 26-04-2016 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 PANTHER PTHR30346 1 294 9.0E-116 T 26-04-2016 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 Gene3D G3DSA:3.40.190.10 181 263 2.2E-15 T 26-04-2016 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 SUPERFAMILY SSF46785 3 109 5.26E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 Pfam PF03466 LysR substrate binding domain 88 284 3.5E-43 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.2E-25 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 Gene3D G3DSA:1.10.10.10 1 85 1.4E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 Gene3D G3DSA:3.40.190.10 89 180 2.7E-21 T 26-04-2016 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 PANTHER PTHR30346:SF3 1 294 9.0E-116 T 26-04-2016 PAM18_RS15335 b94867d9b42bbf01c8fe988e455d6d30 295 SUPERFAMILY SSF53850 87 288 1.76E-40 T 26-04-2016 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:2.40.110.10 121 216 4.0E-41 T 26-04-2016 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.10.540.10 1 117 2.0E-39 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF47203 226 379 2.09E-58 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 PANTHER PTHR10909 1 379 5.9E-194 T 26-04-2016 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF56645 1 240 2.88E-81 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.8E-30 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 PANTHER PTHR10909:SF305 1 379 5.9E-194 T 26-04-2016 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 PIRSF PIRSF016578 3 379 5.9E-22 T 26-04-2016 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.9E-27 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.3E-48 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS21915 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.20.140.10 217 380 4.8E-67 T 26-04-2016 PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 46 115 9.8E-12 T 26-04-2016 IPR007055 BON domain PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 125 190 1.4E-17 T 26-04-2016 IPR007055 BON domain PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 PANTHER PTHR34606 15 192 2.8E-90 T 26-04-2016 PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 53 116 0.019 T 26-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 130 191 0.093 T 26-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria PAM18_RS23080 8aa28c0c74b1e3e9646da0cb6288190b 192 PANTHER PTHR34606:SF4 15 192 2.8E-90 T 26-04-2016 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 Gene3D G3DSA:1.10.1040.10 184 325 2.3E-51 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 322 35.44 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 4.7E-51 T 26-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PANTHER PTHR11728 7 324 1.2E-125 T 26-04-2016 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PIRSF PIRSF000114 1 332 1.3E-107 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 1.2E-38 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 SUPERFAMILY SSF51735 7 178 2.12E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 SUPERFAMILY SSF48179 180 331 1.55E-49 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 1.5E-46 T 26-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 PAM18_RS17595 851c2c239906aafea80fc66d20dd21be 340 Gene3D G3DSA:3.40.50.720 2 183 9.1E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 Gene3D G3DSA:2.60.120.10 126 275 5.3E-70 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 Gene3D G3DSA:2.60.120.10 1 125 8.7E-46 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 195 252 1.5E-7 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 72 141 9.2E-13 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 PANTHER PTHR34571:SF1 6 272 2.3E-87 T 26-04-2016 PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 SUPERFAMILY SSF51182 10 272 7.89E-86 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 PANTHER PTHR34571 6 272 2.3E-87 T 26-04-2016 PAM18_RS19880 da8bdb32621162081d376489cc62a711 278 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 6.8E-117 T 26-04-2016 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS04425 309589fb976d04a047348ef3ff495c3d 192 Pfam PF11354 Protein of unknown function (DUF3156) 31 189 9.5E-54 T 26-04-2016 IPR021500 Protein of unknown function DUF3156 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 SUPERFAMILY SSF54427 32 145 1.04E-18 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 274 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:1.10.10.60 246 279 2.6E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 PANTHER PTHR11019 191 285 7.1E-17 T 26-04-2016 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 SMART SM00342 194 278 1.3E-18 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:1.10.10.60 191 231 1.9E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 Pfam PF12680 SnoaL-like domain 40 138 2.6E-10 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 Gene3D G3DSA:3.10.450.50 33 144 4.1E-15 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 Pfam PF12833 Helix-turn-helix domain 200 280 7.8E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07925 9a993b3cbae5727738af6fa619b24635 285 SUPERFAMILY SSF46689 246 280 8.51E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81665 274 367 6.02E-99 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81665 692 900 6.02E-99 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81665 42 148 6.02E-99 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 392 7.6E-20 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 732 1.3E-28 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:2.70.150.10 143 274 6.9E-36 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:2.70.150.10 43 78 6.9E-36 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00689 Cation transporting ATPase, C-terminus 726 893 1.4E-15 T 26-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:3.40.1110.10 365 550 7.1E-33 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF56784 371 391 1.5E-37 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF56784 493 742 1.5E-37 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PANTHER PTHR24093 10 902 0.0 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 286 302 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 407 420 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 303 322 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 5.6E-89 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 PANTHER PTHR24093:SF128 10 902 0.0 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00122 E1-E2 ATPase 115 364 3.2E-57 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 17 902 0.0 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 657 6.3E-20 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81660 368 551 2.01E-36 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 28 94 4.0E-14 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:1.20.1110.10 612 894 1.8E-66 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 Gene3D G3DSA:1.20.1110.10 79 142 1.8E-66 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SUPERFAMILY SSF81653 161 273 2.35E-26 T 26-04-2016 PAM18_RS25270 42f5f8e2d24822fc5b89e48d2141e78a 903 SMART SM00831 26 99 8.8E-17 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PANTHER PTHR12128:SF34 4 286 3.2E-77 T 26-04-2016 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PIRSF PIRSF001365 1 290 1.1E-70 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 SMART SM01130 3 287 4.0E-89 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 276 2.7E-64 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 Pfam PF00701 Dihydrodipicolinate synthetase family 4 272 2.3E-54 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 26-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 285 43.519 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 26-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 SUPERFAMILY SSF51569 2 286 5.23E-80 T 26-04-2016 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 Gene3D G3DSA:3.20.20.70 1 286 1.3E-82 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.9E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.9E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.9E-15 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS16165 03f22cdd6984d1c834221a9fc8066a0e 291 PANTHER PTHR12128 4 286 3.2E-77 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 Gene3D G3DSA:3.20.20.20 19 280 1.2E-107 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 Pfam PF00809 Pterin binding enzyme 25 264 2.2E-85 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 PANTHER PTHR20941:SF1 1 283 1.6E-119 T 26-04-2016 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 SUPERFAMILY SSF51717 11 279 1.31E-104 T 26-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 PANTHER PTHR20941 1 283 1.6E-119 T 26-04-2016 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 278 1.2E-100 T 26-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS24880 1d8850aaa47a9ffcf32b159a97b3d587 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 PANTHER PTHR22960 3 284 9.0E-125 T 26-04-2016 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 SMART SM00729 15 219 2.2E-14 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 26-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 Gene3D G3DSA:3.20.20.70 3 290 6.9E-73 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 331 8.4E-113 T 26-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF13353 4Fe-4S single cluster domain 22 122 1.0E-6 T 26-04-2016 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 314 3.2E-38 T 26-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 6 331 41.841 T 26-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF04055 Radical SAM superfamily 20 179 2.0E-30 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS18560 34f83a557d7d0969bf4aff943ae18b7b 331 SUPERFAMILY SSF102114 6 278 8.89E-77 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 365 383 - T 26-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 SMART SM00235 78 241 6.1E-29 T 26-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 Gene3D G3DSA:2.150.10.10 265 447 1.4E-28 T 26-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 SUPERFAMILY SSF55486 14 255 1.63E-70 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 170 230 1.6E-5 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 Pfam PF08548 Peptidase M10 serralysin C terminal 257 479 4.1E-82 T 26-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 SUPERFAMILY SSF51120 256 478 6.41E-48 T 26-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PRINTS PR00313 NodO calcium binding signature 339 350 3.9E-12 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PRINTS PR00313 NodO calcium binding signature 378 387 3.9E-12 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PRINTS PR00313 NodO calcium binding signature 369 377 3.9E-12 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PRINTS PR00313 NodO calcium binding signature 360 368 3.9E-12 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PANTHER PTHR36921 1 477 1.4E-140 T 26-04-2016 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 PIRSF PIRSF001205 1 479 7.0E-230 T 26-04-2016 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 PAM18_RS19340 1e52567c44c8ee2aec95e133900e6f43 479 Gene3D G3DSA:3.40.390.10 35 258 3.2E-48 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PAM18_RS09090 febbbe2800a5b6f5a0d7d709f61417fb 296 PANTHER PTHR33969 31 296 1.9E-94 T 26-04-2016 PAM18_RS09090 febbbe2800a5b6f5a0d7d709f61417fb 296 Pfam PF02616 Segregation and condensation protein ScpA 64 155 7.6E-22 T 26-04-2016 IPR003768 Segregation and condensation protein A PAM18_RS09090 febbbe2800a5b6f5a0d7d709f61417fb 296 Pfam PF02616 Segregation and condensation protein ScpA 206 274 7.4E-8 T 26-04-2016 IPR003768 Segregation and condensation protein A PAM18_RS09090 febbbe2800a5b6f5a0d7d709f61417fb 296 PANTHER PTHR33969:SF2 31 296 1.9E-94 T 26-04-2016 PAM18_RS09090 febbbe2800a5b6f5a0d7d709f61417fb 296 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 22.374 T 26-04-2016 IPR003768 Segregation and condensation protein A PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 Pfam PF12019 Type II transport protein GspH 42 161 3.7E-10 T 26-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 Gene3D G3DSA:3.55.40.10 37 155 2.1E-31 T 26-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 149 2.1E-19 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 3.7E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.1E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 SUPERFAMILY SSF54523 7 89 4.55E-13 T 26-04-2016 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 2.9E-12 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 128 143 2.9E-12 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS09565 f27049841bc1d015f5f4fdf3ca35e290 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 2.9E-12 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS23155 025ae64b9e8fdbb8e0b897dbbb8f608a 148 PANTHER PTHR39579 2 148 3.2E-56 T 26-04-2016 PAM18_RS23155 025ae64b9e8fdbb8e0b897dbbb8f608a 148 Pfam PF06295 Protein of unknown function (DUF1043) 14 131 2.4E-20 T 26-04-2016 IPR009386 Protein of unknown function DUF1043 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 PANTHER PTHR30085:SF5 1 310 7.5E-197 T 26-04-2016 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 Gene3D G3DSA:3.40.190.10 127 253 7.9E-11 T 26-04-2016 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 Gene3D G3DSA:3.40.190.10 34 126 3.4E-18 T 26-04-2016 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 SUPERFAMILY SSF53850 27 256 3.32E-46 T 26-04-2016 PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 SMART SM00062 36 258 5.8E-44 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 250 6.7E-30 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05480 9e9abd04275fda4e48c3bf14bd7988b1 341 PANTHER PTHR30085 1 310 7.5E-197 T 26-04-2016 PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 PANTHER PTHR36569 15 95 1.1E-32 T 26-04-2016 PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 PANTHER PTHR36569:SF2 15 95 1.1E-32 T 26-04-2016 PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 44 64 9.5E-10 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 88 108 4.1E-11 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 66 86 3.0E-10 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS14620 f0b39f008114edd0d755ba5a7384b439 114 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 23 42 3.1E-7 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 Gene3D G3DSA:3.40.30.10 2 165 3.4E-45 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 165 38.273 T 26-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 PANTHER PTHR10681:SF81 3 165 4.9E-49 T 26-04-2016 PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 SUPERFAMILY SSF52833 1 163 1.64E-42 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 Pfam PF08534 Redoxin 19 162 1.1E-27 T 26-04-2016 IPR013740 Redoxin GO:0016491 PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 PANTHER PTHR10681 3 165 4.9E-49 T 26-04-2016 PAM18_RS12920 cf8096f28a1c54530dfa1b92f9582272 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 26-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 Gene3D G3DSA:3.50.50.60 269 354 3.7E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 Gene3D G3DSA:3.50.50.60 4 183 3.7E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 4.7E-150 T 26-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PANTHER PTHR13789 1 393 3.3E-191 T 26-04-2016 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 SUPERFAMILY SSF51905 4 178 7.66E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 SUPERFAMILY SSF51905 268 383 7.66E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 5.2E-124 T 26-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PANTHER PTHR13789:SF214 1 393 3.3E-191 T 26-04-2016 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 Pfam PF01494 FAD binding domain 4 317 5.3E-17 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.5E-11 T 26-04-2016 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-11 T 26-04-2016 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.5E-11 T 26-04-2016 PAM18_RS27305 f3864f2df3dc93abf48205dfc1565bed 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-11 T 26-04-2016 PAM18_RS22555 70390495136abc708a26802d5f734419 443 SUPERFAMILY SSF53300 240 365 1.61E-7 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS22555 70390495136abc708a26802d5f734419 443 Pfam PF01882 Protein of unknown function DUF58 199 283 6.1E-23 T 26-04-2016 IPR002881 Domain of unknown function DUF58 PAM18_RS22555 70390495136abc708a26802d5f734419 443 PANTHER PTHR33608 2 443 8.8E-194 T 26-04-2016 PAM18_RS22555 70390495136abc708a26802d5f734419 443 PANTHER PTHR33608:SF3 2 443 8.8E-194 T 26-04-2016 PAM18_RS19580 192172f69608d0f6b6c8dcf076e3919a 205 PANTHER PTHR14119 5 202 3.7E-123 T 26-04-2016 PAM18_RS19580 192172f69608d0f6b6c8dcf076e3919a 205 SUPERFAMILY SSF52499 4 200 4.06E-53 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS19580 192172f69608d0f6b6c8dcf076e3919a 205 PANTHER PTHR14119:SF11 5 202 3.7E-123 T 26-04-2016 PAM18_RS19580 192172f69608d0f6b6c8dcf076e3919a 205 Pfam PF00857 Isochorismatase family 14 164 4.9E-22 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS19580 192172f69608d0f6b6c8dcf076e3919a 205 Gene3D G3DSA:3.40.50.850 5 180 7.0E-47 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 4.0E-73 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF47917 384 512 6.02E-45 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 PANTHER PTHR15184 1 497 2.6E-295 T 26-04-2016 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 PIRSF PIRSF039088 2 514 3.1E-233 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:3.40.50.300 95 383 4.7E-112 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 3.7E-252 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:1.20.150.20 384 511 1.2E-48 T 26-04-2016 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF52540 97 382 1.3E-92 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 50.076 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Gene3D G3DSA:2.40.30.20 3 94 5.4E-33 T 26-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 PANTHER PTHR15184:SF3 1 497 2.6E-295 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 SUPERFAMILY SSF50615 11 95 2.16E-28 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.3E-44 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29050 b568bae2c12809dee0eead7079fe75f9 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 3.2E-16 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 PANTHER PTHR24423 214 419 3.1E-27 T 26-04-2016 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 PANTHER PTHR24423 131 141 3.1E-27 T 26-04-2016 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 SUPERFAMILY SSF55874 306 427 8.7E-12 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 SMART SM00387 339 430 0.0054 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 PANTHER PTHR24423:SF516 214 419 3.1E-27 T 26-04-2016 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 PANTHER PTHR24423:SF516 131 141 3.1E-27 T 26-04-2016 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 Gene3D G3DSA:3.30.565.10 306 427 2.6E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 Gene3D G3DSA:1.10.287.130 226 295 8.6E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 SMART SM00388 235 299 7.4E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 297 2.6E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09690 48267996ae0a590c2d78a33d0eeb0c8c 431 SUPERFAMILY SSF47384 218 295 1.77E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 Pfam PF03466 LysR substrate binding domain 88 287 2.3E-37 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 SUPERFAMILY SSF53850 88 287 5.58E-36 T 26-04-2016 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 PANTHER PTHR30126:SF25 1 306 4.8E-139 T 26-04-2016 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:3.40.190.10 182 262 2.6E-15 T 26-04-2016 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:1.10.10.10 1 88 8.4E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 SUPERFAMILY SSF46785 1 112 8.84E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 Gene3D G3DSA:3.40.190.10 89 181 1.7E-18 T 26-04-2016 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 PANTHER PTHR30126 1 306 4.8E-139 T 26-04-2016 PAM18_RS07195 d2cb47e183be5b9f8366289364beda80 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.0E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17680 ac5e0b5d6cbaf8f24c298a159b88ba04 241 PANTHER PTHR22946:SF4 1 240 2.2E-158 T 26-04-2016 PAM18_RS17680 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Gene3D G3DSA:3.40.50.1820 4 238 4.2E-47 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17680 ac5e0b5d6cbaf8f24c298a159b88ba04 241 SUPERFAMILY SSF53474 6 238 4.9E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17680 ac5e0b5d6cbaf8f24c298a159b88ba04 241 PANTHER PTHR22946 1 240 2.2E-158 T 26-04-2016 PAM18_RS17680 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Pfam PF01738 Dienelactone hydrolase family 28 239 5.5E-44 T 26-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 PANTHER PTHR30026:SF3 1 456 2.9E-144 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 PANTHER PTHR30026 1 456 2.9E-144 T 26-04-2016 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 Pfam PF02321 Outer membrane efflux protein 247 430 2.4E-32 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 Pfam PF02321 Outer membrane efflux protein 31 219 5.8E-25 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 SUPERFAMILY SSF56954 26 440 1.96E-86 T 26-04-2016 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 444 3.5E-144 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS19345 7072346b9431da584c2565fc41183da2 481 Gene3D G3DSA:1.20.1600.10 27 436 1.7E-71 T 26-04-2016 PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 SUPERFAMILY SSF52540 5 335 1.69E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 SMART SM00382 122 256 0.0063 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 PANTHER PTHR30486 1 344 9.4E-200 T 26-04-2016 PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 PANTHER PTHR30486:SF6 1 344 9.4E-200 T 26-04-2016 PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.40.50.300 100 341 1.6E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 Pfam PF00437 Type II/IV secretion system protein 11 268 4.6E-45 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS02000 a93945545a393f8ff423720c7e3c3baf 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.8E-153 T 26-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 SUPERFAMILY SSF53720 4 483 1.07E-146 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 PANTHER PTHR11699 5 499 0.0 T 26-04-2016 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 PANTHER PTHR11699:SF181 5 499 0.0 T 26-04-2016 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 Gene3D G3DSA:3.40.605.10 4 261 9.2E-93 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 Pfam PF00171 Aldehyde dehydrogenase family 13 477 4.1E-138 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 Gene3D G3DSA:3.40.309.10 262 442 1.2E-61 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS21910 63f4df09c5db19a45e6e1380a906b525 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 481 1.3E-235 T 26-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 Gene3D G3DSA:1.10.10.10 3 83 4.7E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 SUPERFAMILY SSF53850 94 299 4.34E-41 T 26-04-2016 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 PANTHER PTHR30537:SF15 2 312 7.4E-184 T 26-04-2016 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 PANTHER PTHR30537 2 312 7.4E-184 T 26-04-2016 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.7E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 Pfam PF03466 LysR substrate binding domain 94 295 2.9E-40 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 Gene3D G3DSA:3.40.190.10 181 265 5.5E-33 T 26-04-2016 PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 SUPERFAMILY SSF46785 4 117 5.75E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25715 4fefe3a946e3512a97c3a87d458ba389 312 Gene3D G3DSA:3.40.190.10 98 180 2.2E-27 T 26-04-2016 PAM18_RS09315 4896262397a4c0120cdd2f1c7d3a1bc9 383 PANTHER PTHR12526 48 378 5.9E-47 T 26-04-2016 PAM18_RS09315 4896262397a4c0120cdd2f1c7d3a1bc9 383 SUPERFAMILY SSF53756 5 376 9.94E-65 T 26-04-2016 PAM18_RS09315 4896262397a4c0120cdd2f1c7d3a1bc9 383 Gene3D G3DSA:3.40.50.2000 166 356 3.5E-19 T 26-04-2016 PAM18_RS09315 4896262397a4c0120cdd2f1c7d3a1bc9 383 Pfam PF00534 Glycosyl transferases group 1 191 356 1.7E-26 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS09315 4896262397a4c0120cdd2f1c7d3a1bc9 383 Pfam PF13439 Glycosyltransferase Family 4 16 180 9.0E-12 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 SMART SM00862 151 227 2.8E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 SMART SM00448 6 116 7.6E-38 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 SUPERFAMILY SSF52172 7 185 4.27E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 Pfam PF00072 Response regulator receiver domain 8 116 1.4E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 PANTHER PTHR26402 6 230 2.5E-171 T 26-04-2016 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.0E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 Gene3D G3DSA:3.40.50.2300 6 127 1.3E-34 T 26-04-2016 PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 Gene3D G3DSA:1.10.10.10 130 229 1.5E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17480 3d333226196d2c830d68c5f0ea7fc3c1 230 PANTHER PTHR26402:SF516 6 230 2.5E-171 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 PANTHER PTHR30024 1 278 2.6E-57 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 PANTHER PTHR30024:SF1 1 278 2.6E-57 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 32 313 3.2E-75 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 Gene3D G3DSA:3.40.190.10 112 223 3.3E-28 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 SUPERFAMILY SSF53850 34 260 4.19E-52 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 Gene3D G3DSA:3.40.190.10 224 266 1.1E-5 T 26-04-2016 PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 SMART SM00062 31 247 0.0014 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS07795 4ecd9b33aef285ad8921d2b83a996a21 333 Pfam PF09084 NMT1/THI5 like 62 250 3.2E-26 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 Gene3D G3DSA:3.40.50.1820 6 295 4.3E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 Pfam PF00561 alpha/beta hydrolase fold 31 145 3.2E-20 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 SUPERFAMILY SSF53474 4 295 3.06E-64 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PANTHER PTHR10992:SF778 8 294 1.1E-72 T 26-04-2016 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PRINTS PR00412 Epoxide hydrolase signature 269 291 1.5E-7 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.5E-7 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PRINTS PR00412 Epoxide hydrolase signature 37 55 1.5E-7 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PRINTS PR00412 Epoxide hydrolase signature 117 130 1.5E-7 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS15170 0ad0041f50424c518a9f9cfaadd29b40 300 PANTHER PTHR10992 8 294 1.1E-72 T 26-04-2016 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 PANTHER PTHR11669 1 405 1.3E-182 T 26-04-2016 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 SUPERFAMILY SSF48019 243 362 1.45E-33 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.1E-44 T 26-04-2016 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 6.9E-131 T 26-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Gene3D G3DSA:1.10.8.60 167 242 1.3E-31 T 26-04-2016 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 SUPERFAMILY SSF52540 29 222 2.52E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Gene3D G3DSA:1.20.272.10 243 360 7.8E-46 T 26-04-2016 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Gene3D G3DSA:3.40.50.300 15 166 6.0E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 564 679 1.2E-15 T 26-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 SMART SM00382 37 179 7.6E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 1.3E-32 T 26-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PAM18_RS18015 a3b4d9a8bb7e87a44883a88bd9c987b1 689 PANTHER PTHR11669:SF0 1 405 1.3E-182 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 PANTHER PTHR30118:SF4 4 306 2.6E-141 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 PANTHER PTHR30118 4 306 2.6E-141 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 3.7E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.4E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 SUPERFAMILY SSF46785 11 93 5.69E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Gene3D G3DSA:3.40.190.10 97 180 3.2E-23 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Gene3D G3DSA:3.40.190.10 277 305 3.2E-23 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Pfam PF03466 LysR substrate binding domain 102 298 2.3E-18 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Gene3D G3DSA:1.10.10.10 9 93 1.5E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 SUPERFAMILY SSF53850 97 301 5.25E-31 T 26-04-2016 PAM18_RS19085 b36badca6774ef79c1594650b5154632 306 Gene3D G3DSA:3.40.190.10 184 273 1.8E-17 T 26-04-2016 PAM18_RS18775 4685bde8b60744c54ea80a64c89dd426 262 PANTHER PTHR13696 1 256 5.1E-157 T 26-04-2016 PAM18_RS18775 4685bde8b60744c54ea80a64c89dd426 262 PANTHER PTHR13696:SF69 1 256 5.1E-157 T 26-04-2016 PAM18_RS18775 4685bde8b60744c54ea80a64c89dd426 262 Gene3D G3DSA:3.40.50.300 1 255 1.2E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18775 4685bde8b60744c54ea80a64c89dd426 262 SUPERFAMILY SSF52540 1 255 7.15E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18775 4685bde8b60744c54ea80a64c89dd426 262 Pfam PF13614 AAA domain 1 179 1.2E-41 T 26-04-2016 IPR025669 AAA domain PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 SUPERFAMILY SSF52540 561 838 1.01E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 SUPERFAMILY SSF52540 176 535 4.51E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 848 1.7E-5 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Gene3D G3DSA:3.40.50.300 565 791 7.3E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Gene3D G3DSA:3.40.50.300 178 359 1.2E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PANTHER PTHR11638:SF122 1 849 0.0 T 26-04-2016 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 SUPERFAMILY SSF81923 10 131 5.23E-19 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 71 2.1E-10 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Gene3D G3DSA:1.10.8.60 792 848 1.4E-4 T 26-04-2016 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PANTHER PTHR11638 1 849 0.0 T 26-04-2016 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 4.1E-36 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Gene3D G3DSA:1.10.8.60 362 444 6.2E-29 T 26-04-2016 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 332 5.1E-10 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 10 849 0.0 T 26-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 SMART SM00382 612 754 5.1E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 SMART SM00382 215 360 1.0E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 8.4E-31 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 8.4E-31 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 8.4E-31 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 8.4E-31 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS13735 01f1f5bb98c38aa3dcd9a05f5a827881 849 Gene3D G3DSA:1.10.1780.10 9 132 1.4E-17 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PRINTS PR00397 Sirohaem Fe-binding site signature 458 476 9.0E-5 T 26-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PRINTS PR00397 Sirohaem Fe-binding site signature 412 430 9.0E-5 T 26-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Gene3D G3DSA:3.90.480.10 48 117 6.2E-37 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Gene3D G3DSA:3.90.480.10 322 404 6.2E-37 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 SUPERFAMILY SSF56014 120 286 1.18E-46 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 SUPERFAMILY SSF55124 1 126 5.72E-31 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 SUPERFAMILY SSF56014 409 554 2.49E-41 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PANTHER PTHR11493 1 295 5.1E-177 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PANTHER PTHR11493 328 552 5.1E-177 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 415 555 2.9E-12 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 7.4E-39 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PANTHER PTHR11493:SF47 1 295 5.1E-177 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 PANTHER PTHR11493:SF47 328 552 5.1E-177 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 49 109 3.4E-18 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 347 398 4.3E-16 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 SUPERFAMILY SSF55124 253 277 5.56E-28 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 SUPERFAMILY SSF55124 316 423 5.56E-28 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Gene3D G3DSA:3.30.413.10 120 278 3.6E-41 T 26-04-2016 PAM18_RS04120 3f6d4255e7b85478c8195aef42d3fc46 557 Gene3D G3DSA:3.30.413.10 410 554 3.3E-37 T 26-04-2016 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 PANTHER PTHR11938:SF101 1 84 1.2E-55 T 26-04-2016 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 SUPERFAMILY SSF54862 3 104 1.2E-24 T 26-04-2016 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.5E-6 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 PANTHER PTHR11938 1 84 1.2E-55 T 26-04-2016 PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 8.6E-24 T 26-04-2016 IPR022569 Ferredoxin, C-terminal PAM18_RS06705 44cb5f54294b451693acde72a0a29904 107 Gene3D G3DSA:3.30.70.20 4 97 6.7E-22 T 26-04-2016 PAM18_RS22305 894a6ecdbbbbbe38df7af2145795417b 471 SUPERFAMILY SSF56672 2 228 2.45E-33 T 26-04-2016 PAM18_RS22305 894a6ecdbbbbbe38df7af2145795417b 471 PANTHER PTHR35369:SF2 1 471 4.2E-211 T 26-04-2016 PAM18_RS22305 894a6ecdbbbbbe38df7af2145795417b 471 PANTHER PTHR35369 1 471 4.2E-211 T 26-04-2016 PAM18_RS22305 894a6ecdbbbbbe38df7af2145795417b 471 Pfam PF00817 impB/mucB/samB family 24 150 7.7E-6 T 26-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.7E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SMART SM00387 378 494 7.5E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PANTHER PTHR24423:SF486 244 638 1.5E-153 T 26-04-2016 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Gene3D G3DSA:3.40.50.2300 512 634 2.7E-44 T 26-04-2016 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 492 2.4E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SUPERFAMILY SSF52172 516 633 2.42E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SMART SM00388 265 330 1.3E-23 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SMART SM00304 191 243 1.2E-7 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 35 102 7.6E-10 T 26-04-2016 IPR019247 Histidine kinase BarA, N-terminal PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Pfam PF00072 Response regulator receiver domain 517 628 7.5E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SMART SM00448 515 628 3.2E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 PANTHER PTHR24423 244 638 1.5E-153 T 26-04-2016 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Gene3D G3DSA:3.30.565.10 332 498 1.1E-47 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SUPERFAMILY SSF55874 319 494 6.42E-47 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Gene3D G3DSA:1.10.287.130 257 326 8.2E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Pfam PF00672 HAMP domain 173 238 3.2E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SUPERFAMILY SSF47384 251 330 4.32E-22 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 SUPERFAMILY SSF158472 192 239 3.14E-6 T 26-04-2016 PAM18_RS17610 a9159d793beb4b71b7e237e4ade4f28f 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 330 1.4E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PANTHER PTHR10422:SF26 33 614 0.0 T 26-04-2016 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 2.3E-134 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-95 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 SUPERFAMILY SSF81442 43 559 3.53E-177 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 Gene3D G3DSA:1.20.210.10 39 589 2.2E-187 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 26-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 PAM18_RS18355 0c882b8b57b5928674bb3509b15b0d2f 658 PANTHER PTHR10422 33 614 0.0 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 PANTHER PTHR30128:SF12 23 165 2.5E-50 T 26-04-2016 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 Gene3D G3DSA:3.30.1330.60 50 165 2.9E-35 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 PANTHER PTHR30128 23 165 2.5E-50 T 26-04-2016 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 PRINTS PR01021 OMPA domain signature 95 110 1.4E-11 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 PRINTS PR01021 OMPA domain signature 65 87 1.4E-11 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 PRINTS PR01021 OMPA domain signature 110 126 1.4E-11 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 SUPERFAMILY SSF103088 52 165 3.14E-33 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS19985 196afbc83f044f0fa8372dd10ac471db 168 Pfam PF00691 OmpA family 65 159 1.8E-20 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 PIRSF PIRSF001554 1 388 3.2E-157 T 26-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF52210 240 384 8.9E-54 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 PANTHER PTHR11815 1 388 4.7E-237 T 26-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-177 T 26-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.1490.20 21 95 9.1E-36 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF56059 1 237 1.9E-82 T 26-04-2016 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.40.50.261 241 383 6.5E-67 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF08442 ATP-grasp domain 2 203 3.8E-83 T 26-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF00549 CoA-ligase 262 382 1.4E-24 T 26-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 26-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.470.20 96 239 5.6E-58 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS17725 14a7396624b7f524b09554cb0ddc0fb9 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.887 T 26-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 PRINTS PR00116 Arginase signature 238 267 2.2E-13 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 PRINTS PR00116 Arginase signature 125 140 2.2E-13 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 ProSitePatterns PS01053 Arginase family signature. 241 262 - T 26-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 TIGRFAM TIGR01230 agmatinase: agmatinase 34 311 3.5E-63 T 26-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 PIRSF PIRSF036979 15 316 2.2E-102 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 PANTHER PTHR11358 1 316 2.2E-208 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 Gene3D G3DSA:3.40.800.10 8 313 6.2E-126 T 26-04-2016 IPR023696 Ureohydrolase domain PAM18_RS18980 412b561faef652036c03400ece8f6422 319 Pfam PF00491 Arginase family 39 310 6.4E-89 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 PANTHER PTHR11358:SF27 1 316 2.2E-208 T 26-04-2016 PAM18_RS18980 412b561faef652036c03400ece8f6422 319 SUPERFAMILY SSF52768 4 313 5.94E-100 T 26-04-2016 PAM18_RS24135 05e6d2d6b57c870476b7753c857be03d 487 PIRSF PIRSF006060 2 484 7.0E-80 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS24135 05e6d2d6b57c870476b7753c857be03d 487 PANTHER PTHR11785:SF204 5 482 5.6E-218 T 26-04-2016 PAM18_RS24135 05e6d2d6b57c870476b7753c857be03d 487 Pfam PF00324 Amino acid permease 20 476 4.5E-138 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS24135 05e6d2d6b57c870476b7753c857be03d 487 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS24135 05e6d2d6b57c870476b7753c857be03d 487 PANTHER PTHR11785 5 482 5.6E-218 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 SUPERFAMILY SSF63411 591 768 4.44E-19 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 26-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 SUPERFAMILY SSF63411 11 218 1.2E-34 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 Pfam PF05193 Peptidase M16 inactive domain 184 341 3.7E-12 T 26-04-2016 IPR007863 Peptidase M16, C-terminal PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 PANTHER PTHR11851 15 298 1.6E-50 T 26-04-2016 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 Gene3D G3DSA:3.30.830.10 601 736 9.3E-22 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 Pfam PF00675 Insulinase (Peptidase family M16) 24 144 2.1E-28 T 26-04-2016 IPR011765 Peptidase M16, N-terminal PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 12 688 3.4E-273 T 26-04-2016 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 UniPathway: UPA00539 PAM18_RS15745 27702dad4eb7ab5970a134e794b1a6df 775 Gene3D G3DSA:3.30.830.10 7 231 4.2E-42 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS27205 1b1937c4fe334f0624d67aeb1bf17c1d 527 PANTHER PTHR38761 2 525 0.0 T 26-04-2016 PAM18_RS27205 1b1937c4fe334f0624d67aeb1bf17c1d 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 229.009 T 26-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PAM18_RS27205 1b1937c4fe334f0624d67aeb1bf17c1d 527 Pfam PF04262 Glutamate-cysteine ligase 10 377 7.3E-169 T 26-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PAM18_RS27205 1b1937c4fe334f0624d67aeb1bf17c1d 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 4.4E-270 T 26-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 PAM18_RS27205 1b1937c4fe334f0624d67aeb1bf17c1d 527 SUPERFAMILY SSF55931 8 514 5.56E-196 T 26-04-2016 PAM18_RS00580 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Gene3D G3DSA:3.40.30.10 11 208 5.8E-55 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00580 f5c9f15e6896c9d4b9ed553ac4c76c17 211 PANTHER PTHR12151:SF0 6 208 4.1E-71 T 26-04-2016 PAM18_RS00580 f5c9f15e6896c9d4b9ed553ac4c76c17 211 SUPERFAMILY SSF52833 50 207 2.43E-49 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00580 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Pfam PF02630 SCO1/SenC 48 185 3.2E-37 T 26-04-2016 IPR003782 Copper chaperone SCO1/SenC PAM18_RS00580 f5c9f15e6896c9d4b9ed553ac4c76c17 211 PANTHER PTHR12151 6 208 4.1E-71 T 26-04-2016 IPR003782 Copper chaperone SCO1/SenC PAM18_RS27725 528059135d44537a2fb92ac7dc650388 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 23 63 9.0E-17 T 26-04-2016 PAM18_RS27725 528059135d44537a2fb92ac7dc650388 63 Pfam PF13617 YnbE-like lipoprotein 7 61 1.2E-26 T 26-04-2016 IPR025985 YnbE-like lipoprotein PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 289 44.057 T 26-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PANTHER PTHR11451:SF35 243 259 7.4E-120 T 26-04-2016 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PANTHER PTHR11451:SF35 5 220 7.4E-120 T 26-04-2016 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 6.5E-13 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 6.5E-13 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 6.5E-13 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 6.5E-13 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 6.5E-13 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 SUPERFAMILY SSF52374 5 284 4.02E-88 T 26-04-2016 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Gene3D G3DSA:3.40.50.620 171 220 3.0E-41 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Gene3D G3DSA:3.40.50.620 5 70 3.0E-41 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Gene3D G3DSA:3.90.800.10 71 169 1.1E-21 T 26-04-2016 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 108 8.8E-30 T 26-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 123 230 2.9E-16 T 26-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 269 4.0E-110 T 26-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PANTHER PTHR11451 243 259 7.4E-120 T 26-04-2016 PAM18_RS24735 3537310801f299672f09a2f82e7d1804 293 PANTHER PTHR11451 5 220 7.4E-120 T 26-04-2016 PAM18_RS05790 a74472102fb6f66debb2982cc7b5a480 264 PANTHER PTHR23088:SF28 1 262 1.1E-160 T 26-04-2016 PAM18_RS05790 a74472102fb6f66debb2982cc7b5a480 264 SUPERFAMILY SSF56317 6 258 4.32E-65 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS05790 a74472102fb6f66debb2982cc7b5a480 264 Gene3D G3DSA:3.60.110.10 9 258 4.6E-64 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS05790 a74472102fb6f66debb2982cc7b5a480 264 Pfam PF00795 Carbon-nitrogen hydrolase 12 249 1.2E-31 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS05790 a74472102fb6f66debb2982cc7b5a480 264 PANTHER PTHR23088 1 262 1.1E-160 T 26-04-2016 PAM18_RS00960 e1a8119d260dc81c7c91bc7c236429d9 241 SMART SM00014 110 215 0.0075 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS00960 e1a8119d260dc81c7c91bc7c236429d9 241 SUPERFAMILY SSF48317 3 232 3.66E-34 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS00960 e1a8119d260dc81c7c91bc7c236429d9 241 Gene3D G3DSA:1.20.144.10 37 235 1.1E-43 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS00960 e1a8119d260dc81c7c91bc7c236429d9 241 PIRSF PIRSF000897 1 241 1.7E-68 T 26-04-2016 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 PAM18_RS00960 e1a8119d260dc81c7c91bc7c236429d9 241 Pfam PF01569 PAP2 superfamily 120 212 2.3E-12 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 PIRSF PIRSF029038 6 326 5.6E-157 T 26-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 16 316 55.287 T 26-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 SUPERFAMILY SSF53335 54 313 1.49E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 Gene3D G3DSA:3.40.50.150 84 225 1.5E-10 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 Pfam PF05971 Protein of unknown function (DUF890) 14 314 8.7E-155 T 26-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 PANTHER PTHR13393 3 321 7.1E-138 T 26-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 PAM18_RS05570 ca5bc6bb4b292fb41f8840f1aea80999 336 PANTHER PTHR13393:SF0 3 321 7.1E-138 T 26-04-2016 PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 PANTHER PTHR30136:SF14 1 254 1.1E-87 T 26-04-2016 PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 SUPERFAMILY SSF55781 81 239 3.86E-21 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 Gene3D G3DSA:1.10.10.10 17 91 6.3E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 Gene3D G3DSA:3.30.450.40 94 247 1.1E-20 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 PANTHER PTHR30136 1 254 1.1E-87 T 26-04-2016 PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 SMART SM00346 23 113 2.6E-17 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 Pfam PF01614 Bacterial transcriptional regulator 145 245 4.4E-7 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 Pfam PF09339 IclR helix-turn-helix domain 25 76 6.3E-15 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS03985 ae241a19fa3fe1f0690813a4407f2d7d 272 SUPERFAMILY SSF46785 23 97 3.98E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27645 af23493940a284966174769de2965f34 497 PANTHER PTHR32039 1 494 1.5E-253 T 26-04-2016 PAM18_RS27645 af23493940a284966174769de2965f34 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 1.1E-189 T 26-04-2016 IPR004482 Mg chelatase-related protein PAM18_RS27645 af23493940a284966174769de2965f34 497 Gene3D G3DSA:3.30.230.10 5 167 2.7E-32 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS27645 af23493940a284966174769de2965f34 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 8.3E-7 T 26-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PAM18_RS27645 af23493940a284966174769de2965f34 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 8.3E-7 T 26-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PAM18_RS27645 af23493940a284966174769de2965f34 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 8.3E-7 T 26-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PAM18_RS27645 af23493940a284966174769de2965f34 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 8.3E-7 T 26-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 PAM18_RS27645 af23493940a284966174769de2965f34 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 9.8E-44 T 26-04-2016 PAM18_RS27645 af23493940a284966174769de2965f34 497 PANTHER PTHR32039:SF7 1 494 1.5E-253 T 26-04-2016 IPR004482 Mg chelatase-related protein PAM18_RS27645 af23493940a284966174769de2965f34 497 SMART SM00382 210 391 9.7E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27645 af23493940a284966174769de2965f34 497 SUPERFAMILY SSF54211 8 169 6.07E-35 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS27645 af23493940a284966174769de2965f34 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 5.2E-96 T 26-04-2016 IPR000523 Magnesium chelatase ChlI domain PAM18_RS27645 af23493940a284966174769de2965f34 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 492 9.1E-26 T 26-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain PAM18_RS27645 af23493940a284966174769de2965f34 497 Gene3D G3DSA:3.40.50.300 189 386 1.9E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27645 af23493940a284966174769de2965f34 497 SUPERFAMILY SSF52540 187 492 1.3E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 Gene3D G3DSA:3.40.50.720 2 259 6.2E-66 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-27 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 2.2E-41 T 26-04-2016 PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-5 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-5 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-5 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PANTHER PTHR24322 12 138 3.3E-80 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PANTHER PTHR24322 154 186 3.3E-80 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 SUPERFAMILY SSF51735 1 259 1.97E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PANTHER PTHR24322:SF25 12 138 3.3E-80 T 26-04-2016 PAM18_RS18225 66c862cdd16d31b263ae8b013828ceba 264 PANTHER PTHR24322:SF25 154 186 3.3E-80 T 26-04-2016 PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 Pfam PF12704 MacB-like periplasmic core domain 291 507 4.5E-37 T 26-04-2016 IPR025857 MacB-like periplasmic core domain PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 SMART SM00382 40 227 3.5E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 Pfam PF00005 ABC transporter 31 179 2.1E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 PANTHER PTHR24220 12 399 5.1E-111 T 26-04-2016 PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 SUPERFAMILY SSF52540 10 245 2.23E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 Pfam PF02687 FtsX-like permease family 545 656 4.2E-17 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 PANTHER PTHR24220:SF578 12 399 5.1E-111 T 26-04-2016 PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 Gene3D G3DSA:3.40.50.300 6 241 1.5E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13635 64cbbaf5c2f6b5ddd09d13bb395c529e 663 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS27605 9d9720c2c7c1ab0de2d97e8a72a8780b 389 Pfam PF07690 Major Facilitator Superfamily 11 331 1.5E-16 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS27605 9d9720c2c7c1ab0de2d97e8a72a8780b 389 Gene3D G3DSA:1.20.1250.20 8 187 1.8E-19 T 26-04-2016 PAM18_RS27605 9d9720c2c7c1ab0de2d97e8a72a8780b 389 SUPERFAMILY SSF103473 5 381 4.84E-30 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS27605 9d9720c2c7c1ab0de2d97e8a72a8780b 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 PANTHER PTHR23024 63 318 1.3E-73 T 26-04-2016 PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 Gene3D G3DSA:3.40.50.1820 4 307 1.7E-78 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 SUPERFAMILY SSF53474 49 291 1.11E-55 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 154 166 - T 26-04-2016 IPR033140 Lipase, GDXG, putative serine active site PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 Pfam PF07859 alpha/beta hydrolase fold 82 287 2.4E-65 T 26-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PAM18_RS28140 dad31dc771383a647bccd9b87dab291e 321 PANTHER PTHR23024:SF24 63 318 1.3E-73 T 26-04-2016 PAM18_RS19185 920b98bfefbd93ec8ac43db06043541c 173 SUPERFAMILY SSF52540 4 169 1.97E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19185 920b98bfefbd93ec8ac43db06043541c 173 PANTHER PTHR34848 1 171 3.8E-77 T 26-04-2016 PAM18_RS19185 920b98bfefbd93ec8ac43db06043541c 173 PIRSF PIRSF006135 1 171 5.8E-52 T 26-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PAM18_RS19185 920b98bfefbd93ec8ac43db06043541c 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 3.9E-59 T 26-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 PAM18_RS19185 920b98bfefbd93ec8ac43db06043541c 173 Gene3D G3DSA:3.40.50.300 4 169 1.5E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 Gene3D G3DSA:2.120.10.30 39 167 9.9E-5 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 SUPERFAMILY SSF50630 98 201 3.5E-20 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 Pfam PF13975 gag-polyprotein putative aspartyl protease 107 198 9.4E-27 T 26-04-2016 PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 117 128 - T 26-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 PANTHER PTHR41535 1 212 6.3E-61 T 26-04-2016 PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 PANTHER PTHR41535:SF1 1 212 6.3E-61 T 26-04-2016 PAM18_RS04540 d740b9d5924abb0a9f87c3984b7255c9 214 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 94 211 1.4E-42 T 26-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal PAM18_RS21535 671b89c484b1e1f58f9e7814dbcc0669 107 Pfam PF13744 Helix-turn-helix domain 12 86 4.6E-13 T 26-04-2016 PAM18_RS21535 671b89c484b1e1f58f9e7814dbcc0669 107 SUPERFAMILY SSF47413 31 95 2.73E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS21535 671b89c484b1e1f58f9e7814dbcc0669 107 Gene3D G3DSA:1.10.260.40 33 87 7.7E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 Gene3D G3DSA:1.10.760.10 330 381 9.6E-12 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 Gene3D G3DSA:1.10.760.10 435 501 9.6E-12 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 Gene3D G3DSA:1.10.760.10 548 567 9.6E-12 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 SUPERFAMILY SSF46626 452 499 6.12E-15 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 SUPERFAMILY SSF46626 322 377 6.12E-15 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS00035 f1df839f341404e7cbaf87d47a266b10 568 SUPERFAMILY SSF46626 546 568 6.12E-15 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS07645 d5a971f4eef2d5501b7f829e0fd984b9 295 Gene3D G3DSA:3.40.50.1820 8 261 2.3E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS07645 d5a971f4eef2d5501b7f829e0fd984b9 295 PANTHER PTHR10992 8 274 4.0E-25 T 26-04-2016 PAM18_RS07645 d5a971f4eef2d5501b7f829e0fd984b9 295 Pfam PF00561 alpha/beta hydrolase fold 30 252 6.2E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS07645 d5a971f4eef2d5501b7f829e0fd984b9 295 SUPERFAMILY SSF53474 206 274 1.08E-40 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS07645 d5a971f4eef2d5501b7f829e0fd984b9 295 SUPERFAMILY SSF53474 8 175 1.08E-40 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10030 8f873f4603257b381908671416a89ad2 161 Gene3D G3DSA:3.40.50.300 45 159 6.1E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10030 8f873f4603257b381908671416a89ad2 161 Pfam PF03846 Cell division inhibitor SulA 47 133 1.3E-8 T 26-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 PAM18_RS10030 8f873f4603257b381908671416a89ad2 161 PANTHER PTHR35369 1 159 5.9E-39 T 26-04-2016 PAM18_RS10030 8f873f4603257b381908671416a89ad2 161 SUPERFAMILY SSF52540 45 159 1.59E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 PIRSF PIRSF005763 2 252 2.6E-83 T 26-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:2.40.50.100 112 175 8.9E-24 T 26-04-2016 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF50331 161 248 2.55E-10 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 113 179 4.6E-16 T 26-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 15 103 5.9E-31 T 26-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF46785 11 99 2.21E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:1.10.10.10 12 111 2.4E-39 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF03459 TOBE domain 186 247 1.5E-13 T 26-04-2016 IPR005116 Transport-associated OB, type 1 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF03459 TOBE domain 115 177 2.9E-16 T 26-04-2016 IPR005116 Transport-associated OB, type 1 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 79 2.1E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF50331 113 181 1.65E-16 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 PANTHER PTHR30432 7 252 4.8E-58 T 26-04-2016 PAM18_RS02465 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:2.40.50.100 188 250 6.7E-13 T 26-04-2016 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 Gene3D G3DSA:3.30.950.10 110 230 1.6E-40 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 26-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 6.9E-48 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 Gene3D G3DSA:3.40.1010.10 2 109 2.3E-33 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 PANTHER PTHR21091:SF17 1 210 8.1E-69 T 26-04-2016 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 SUPERFAMILY SSF53790 2 229 1.27E-68 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 PANTHER PTHR21091 1 210 8.1E-69 T 26-04-2016 PAM18_RS10335 9d021530fea30dd4b081924c10d3cee8 250 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 247 4.5E-98 T 26-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 8.2E-65 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 Gene3D G3DSA:3.30.70.260 144 200 6.9E-30 T 26-04-2016 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 Gene3D G3DSA:3.40.50.1360 4 143 4.8E-57 T 26-04-2016 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 33.609 T 26-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 SUPERFAMILY SSF100950 1 150 2.7E-42 T 26-04-2016 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 PANTHER PTHR11934:SF11 1 223 1.4E-140 T 26-04-2016 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 PANTHER PTHR11934 1 223 1.4E-140 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 2.7E-57 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 PAM18_RS01660 6b6ff7c984edea64a1ee43e09081cef4 223 SUPERFAMILY SSF75445 131 202 7.98E-24 T 26-04-2016 PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 PANTHER PTHR30024:SF11 1 319 1.4E-147 T 26-04-2016 PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 SUPERFAMILY SSF53850 29 258 1.07E-46 T 26-04-2016 PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 310 8.1E-63 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 SMART SM00062 30 248 3.8E-23 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 PANTHER PTHR30024 1 319 1.4E-147 T 26-04-2016 PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 Pfam PF09084 NMT1/THI5 like 57 252 3.4E-16 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS12230 995ac44206a1b29a90e51641156d93b0 319 Gene3D G3DSA:3.40.190.10 114 235 3.7E-29 T 26-04-2016 PAM18_RS05105 d3015c54ddfb0d0ed7e7c8bdd7f980b2 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 270 3.3E-67 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS05105 d3015c54ddfb0d0ed7e7c8bdd7f980b2 277 SUPERFAMILY SSF51197 3 277 1.33E-95 T 26-04-2016 PAM18_RS05105 d3015c54ddfb0d0ed7e7c8bdd7f980b2 277 PANTHER PTHR30468:SF2 1 277 5.6E-105 T 26-04-2016 PAM18_RS05105 d3015c54ddfb0d0ed7e7c8bdd7f980b2 277 PANTHER PTHR30468 1 277 5.6E-105 T 26-04-2016 PAM18_RS05105 d3015c54ddfb0d0ed7e7c8bdd7f980b2 277 Gene3D G3DSA:3.60.130.10 2 277 1.0E-97 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 PANTHER PTHR10196:SF9 1 502 4.4E-268 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 8 500 1.4E-227 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 139 151 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 PANTHER PTHR10196 1 502 4.4E-268 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 258 500 9.5E-104 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 455 5.6E-62 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 1.4E-87 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 258 500 1.51E-85 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 Hamap MF_00186 Glycerol kinase [glpK]. 7 501 59.451 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 8 259 2.46E-96 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 6 257 4.1E-106 T 26-04-2016 PAM18_RS07220 3399c410cd2e669d9f592fb75cee140a 505 PIRSF PIRSF000538 7 504 6.0E-180 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS13135 99cca0803c169682f18a4833539e4a82 124 PANTHER PTHR36114 1 122 2.1E-32 T 26-04-2016 PAM18_RS13135 99cca0803c169682f18a4833539e4a82 124 Pfam PF07883 Cupin domain 42 101 7.2E-13 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS13135 99cca0803c169682f18a4833539e4a82 124 SUPERFAMILY SSF51182 5 110 3.66E-26 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS13135 99cca0803c169682f18a4833539e4a82 124 Gene3D G3DSA:2.60.120.10 7 110 1.6E-36 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 PANTHER PTHR10259 1 217 7.6E-132 T 26-04-2016 PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 SUPERFAMILY SSF53335 1 216 9.66E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 Gene3D G3DSA:3.40.50.150 16 217 7.1E-64 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 4.7E-86 T 26-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 PANTHER PTHR10259:SF16 1 217 7.6E-132 T 26-04-2016 PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 40.211 T 26-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 PIRSF PIRSF023956 1 218 1.7E-76 T 26-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 PAM18_RS10930 350dd6a78cfcaf27c06b99da1d8609ee 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 4.2E-87 T 26-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 PAM18_RS17380 b496d40ebdce93a2d6459165189e488d 518 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 225 483 5.9E-77 T 26-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 PAM18_RS17380 b496d40ebdce93a2d6459165189e488d 518 PANTHER PTHR37024 1 516 9.9E-235 T 26-04-2016 PAM18_RS17380 b496d40ebdce93a2d6459165189e488d 518 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 12 484 1.7E-134 T 26-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 PAM18_RS17380 b496d40ebdce93a2d6459165189e488d 518 PANTHER PTHR37024:SF1 1 516 9.9E-235 T 26-04-2016 PAM18_RS17380 b496d40ebdce93a2d6459165189e488d 518 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 127 1.1E-29 T 26-04-2016 IPR010657 ImpA, N-terminal PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Gene3D G3DSA:3.40.50.300 195 385 3.3E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 SMART SM00487 199 395 2.7E-25 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 PANTHER PTHR30580 1 739 3.5E-276 T 26-04-2016 PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Pfam PF00270 DEAD/DEAH box helicase 207 367 2.1E-14 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 SMART SM00490 496 593 2.0E-9 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 738 25.209 T 26-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Pfam PF00271 Helicase conserved C-terminal domain 518 592 2.7E-6 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 SUPERFAMILY SSF52540 499 616 1.78E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 SUPERFAMILY SSF52540 413 438 1.78E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Gene3D G3DSA:3.40.50.300 411 432 1.1E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 Gene3D G3DSA:3.40.50.300 497 637 1.1E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 TIGRFAM TIGR00595 priA: primosomal protein N' 225 736 5.5E-184 T 26-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PAM18_RS26415 d91f09649d39a784127e4d1c12f2cd1d 739 SUPERFAMILY SSF52540 200 383 1.33E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 1.7E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 26-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PANTHER PTHR11528:SF44 2 631 0.0 T 26-04-2016 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 SMART SM00387 30 187 1.8E-13 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF00183 Hsp90 protein 227 629 2.9E-132 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF55874 8 216 1.44E-65 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.88 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.2E-61 T 26-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF54211 236 491 2.12E-98 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PANTHER PTHR11528 2 631 0.0 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:3.30.565.10 8 243 2.6E-84 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF110942 518 630 4.05E-35 T 26-04-2016 PAM18_RS17685 779af721d76805f4f2e37c253abbbfbf 634 PIRSF PIRSF002583 1 634 3.2E-218 T 26-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 PAM18_RS28145 d48a217240ce775aea60b49425cd9cad 159 SUPERFAMILY SSF54637 6 156 1.1E-45 T 26-04-2016 IPR029069 HotDog domain PAM18_RS28145 d48a217240ce775aea60b49425cd9cad 159 PANTHER PTHR31793:SF2 7 148 2.8E-81 T 26-04-2016 PAM18_RS28145 d48a217240ce775aea60b49425cd9cad 159 PANTHER PTHR31793 7 148 2.8E-81 T 26-04-2016 PAM18_RS28145 d48a217240ce775aea60b49425cd9cad 159 Pfam PF13279 Thioesterase-like superfamily 12 129 1.7E-18 T 26-04-2016 PAM18_RS28145 d48a217240ce775aea60b49425cd9cad 159 Gene3D G3DSA:3.10.129.10 3 140 3.1E-51 T 26-04-2016 IPR029069 HotDog domain PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 PANTHER PTHR30006 1 342 4.0E-198 T 26-04-2016 PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 Gene3D G3DSA:3.40.190.10 23 136 1.0E-5 T 26-04-2016 PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 Gene3D G3DSA:3.40.190.10 137 282 2.4E-36 T 26-04-2016 PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 Pfam PF13416 Bacterial extracellular solute-binding protein 41 306 2.2E-42 T 26-04-2016 PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 PANTHER PTHR30006:SF8 1 342 4.0E-198 T 26-04-2016 PAM18_RS01100 582f1e67e4e2056a1a2770507c1cd8c0 342 SUPERFAMILY SSF53850 21 339 6.09E-64 T 26-04-2016 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 PANTHER PTHR30504:SF4 19 525 0.0 T 26-04-2016 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 PANTHER PTHR30504 19 525 0.0 T 26-04-2016 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 SUPERFAMILY SSF81296 411 524 6.16E-31 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 36 521 2.1E-200 T 26-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 Gene3D G3DSA:2.60.40.10 413 524 4.6E-38 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 18 523 62.242 T 26-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 SUPERFAMILY SSF74650 36 407 3.04E-167 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 Gene3D G3DSA:2.70.98.10 35 408 3.5E-176 T 26-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PAM18_RS26555 ff22612d4bd49794c32ac4153dd0fb65 525 PIRSF PIRSF006281 2 525 2.8E-244 T 26-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 Pfam PF09339 IclR helix-turn-helix domain 6 56 2.4E-17 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 Gene3D G3DSA:3.30.450.40 72 252 5.1E-44 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 SMART SM00346 2 93 1.2E-19 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 Gene3D G3DSA:1.10.10.10 6 71 2.5E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 PANTHER PTHR30136:SF13 6 249 3.9E-106 T 26-04-2016 PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 Pfam PF01614 Bacterial transcriptional regulator 124 250 9.4E-19 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 SUPERFAMILY SSF55781 70 251 1.63E-38 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 PANTHER PTHR30136 6 249 3.9E-106 T 26-04-2016 PAM18_RS01170 36e8636f59aef0dfbacf8f8e53d6fa3a 259 SUPERFAMILY SSF46785 6 76 1.07E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 SMART SM00947 27 193 2.4E-68 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 PANTHER PTHR11002:SF13 1 208 9.1E-86 T 26-04-2016 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 26-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 26-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 PANTHER PTHR11002 1 208 9.1E-86 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 Pfam PF00484 Carbonic anhydrase 34 189 1.9E-51 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 Gene3D G3DSA:3.40.1050.10 1 204 6.0E-73 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS15340 9497c932df920464d399e68ea37cb8ed 220 SUPERFAMILY SSF53056 2 204 6.41E-67 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS10445 1a4ce360fbfcdb89283c0e7f363213bb 443 SUPERFAMILY SSF53474 3 140 2.35E-18 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10445 1a4ce360fbfcdb89283c0e7f363213bb 443 Gene3D G3DSA:3.40.50.1820 5 119 2.7E-13 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10445 1a4ce360fbfcdb89283c0e7f363213bb 443 Gene3D G3DSA:3.40.50.1820 179 205 2.7E-13 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS27140 a50c232e8bccd093ec51ab732813c335 200 Pfam PF00881 Nitroreductase family 7 177 2.5E-33 T 26-04-2016 IPR029479 Nitroreductase PAM18_RS27140 a50c232e8bccd093ec51ab732813c335 200 SUPERFAMILY SSF55469 1 195 3.27E-49 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS27140 a50c232e8bccd093ec51ab732813c335 200 PANTHER PTHR23026 1 200 2.9E-58 T 26-04-2016 PAM18_RS27140 a50c232e8bccd093ec51ab732813c335 200 PANTHER PTHR23026:SF111 1 200 2.9E-58 T 26-04-2016 PAM18_RS27140 a50c232e8bccd093ec51ab732813c335 200 Gene3D G3DSA:3.40.109.10 1 195 6.1E-53 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 SUPERFAMILY SSF52833 3 84 4.84E-24 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 SUPERFAMILY SSF47616 81 199 1.12E-32 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 PANTHER PTHR11260:SF178 1 209 5.5E-92 T 26-04-2016 PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 Gene3D G3DSA:1.20.1050.10 81 198 8.7E-38 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 Gene3D G3DSA:3.40.30.10 2 80 4.6E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 78 8.0E-17 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 PANTHER PTHR11260 1 209 5.5E-92 T 26-04-2016 PAM18_RS19665 faf3590d54ad666322115d7d658a548e 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 194 1.4E-11 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS00185 28e798fab1488045615d6e039570f443 402 SUPERFAMILY SSF53686 8 394 1.7E-151 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS00185 28e798fab1488045615d6e039570f443 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 2.0E-47 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS00185 28e798fab1488045615d6e039570f443 402 PIRSF PIRSF001413 4 402 7.6E-163 T 26-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 PANTHER PTHR10314:SF3 12 400 7.7E-244 T 26-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 395 5.0E-196 T 26-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 183 398 1.9E-98 T 26-04-2016 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 PANTHER PTHR10314 12 400 7.7E-244 T 26-04-2016 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 104 182 8.5E-22 T 26-04-2016 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 26-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00185 28e798fab1488045615d6e039570f443 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 396 52.811 T 26-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS28865 d8964095ae6b02053a7f96847fc5df8d 70 PANTHER PTHR37011 1 70 1.1E-30 T 26-04-2016 PAM18_RS28865 d8964095ae6b02053a7f96847fc5df8d 70 SUPERFAMILY SSF50182 19 69 6.0E-12 T 26-04-2016 IPR010920 LSM domain PAM18_RS28865 d8964095ae6b02053a7f96847fc5df8d 70 Pfam PF06004 Bacterial protein of unknown function (DUF903) 22 68 6.3E-16 T 26-04-2016 IPR010305 Protein of unknown function DUF903 PAM18_RS28865 d8964095ae6b02053a7f96847fc5df8d 70 PANTHER PTHR37011:SF1 1 70 1.1E-30 T 26-04-2016 PAM18_RS28865 d8964095ae6b02053a7f96847fc5df8d 70 Gene3D G3DSA:2.30.30.100 18 69 4.6E-13 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.728 T 26-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PANTHER PTHR11405 3 170 3.3E-244 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PANTHER PTHR11405 186 378 3.3E-244 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 8.9E-52 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 9.5E-144 T 26-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 SUPERFAMILY SSF52021 4 144 1.96E-56 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 SMART SM01097 3 133 8.9E-92 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.2E-46 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 Gene3D G3DSA:3.40.50.880 154 376 3.5E-80 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.1E-11 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.1E-11 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.1E-11 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 SUPERFAMILY SSF52317 153 377 3.21E-62 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 5.3E-39 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.3E-39 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.3E-39 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 5.3E-39 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.3E-39 T 26-04-2016 PAM18_RS24920 593379bc28593faf123018c1e466a9e3 378 Gene3D G3DSA:3.50.30.20 3 145 7.6E-61 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS13445 e7db453bf888e202e6ccaacaed6f1b44 170 PANTHER PTHR36180:SF2 1 170 5.2E-51 T 26-04-2016 PAM18_RS13445 e7db453bf888e202e6ccaacaed6f1b44 170 PANTHER PTHR36180 1 170 5.2E-51 T 26-04-2016 PAM18_RS13445 e7db453bf888e202e6ccaacaed6f1b44 170 Pfam PF02498 BRO family, N-terminal domain 20 104 7.3E-10 T 26-04-2016 IPR003497 BRO N-terminal domain PAM18_RS13445 e7db453bf888e202e6ccaacaed6f1b44 170 SMART SM01040 18 104 7.9E-18 T 26-04-2016 IPR003497 BRO N-terminal domain PAM18_RS23410 208e7b4832cc49bb5bb9fad765961e10 269 PIRSF PIRSF012281 3 269 4.6E-127 T 26-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 PAM18_RS23410 208e7b4832cc49bb5bb9fad765961e10 269 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 255 1.6E-16 T 26-04-2016 IPR019220 Domain of unknown function DUF2135 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 Gene3D G3DSA:1.10.287.950 297 511 3.2E-46 T 26-04-2016 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 182 1.2E-20 T 26-04-2016 IPR024478 4HB MCP domain PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PANTHER PTHR32089:SF1 104 171 5.6E-98 T 26-04-2016 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 SUPERFAMILY SSF58104 233 542 1.83E-61 T 26-04-2016 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 SMART SM00283 273 541 2.4E-46 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PANTHER PTHR32089:SF1 187 542 5.6E-98 T 26-04-2016 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 540 6.6E-40 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PANTHER PTHR32089 187 542 5.6E-98 T 26-04-2016 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 17 1.8E-18 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.8E-18 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.8E-18 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.8E-18 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 SMART SM00304 213 265 1.4E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 Pfam PF00672 HAMP domain 194 261 5.0E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS06270 883822786f97763247898ad68e86ec78 542 PANTHER PTHR32089 104 171 5.6E-98 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:1.10.10.10 505 565 2.0E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:3.40.50.300 2 180 6.6E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Pfam PF09106 Elongation factor SelB, winged helix 442 497 2.3E-15 T 26-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Pfam PF00009 Elongation factor Tu GTP binding domain 2 161 5.8E-31 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PANTHER PTHR23115 1 367 6.7E-140 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PANTHER PTHR23115 423 583 6.7E-140 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Pfam PF09107 Elongation factor SelB, winged helix 583 625 1.8E-18 T 26-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 627 3.0E-146 T 26-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PANTHER PTHR23115:SF129 1 367 6.7E-140 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PANTHER PTHR23115:SF129 423 583 6.7E-140 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF50447 172 261 1.04E-17 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:2.40.30.10 295 353 5.2E-5 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF46785 578 626 5.44E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF50465 269 365 6.83E-19 T 26-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 159 1.3E-12 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:1.10.10.10 432 498 1.9E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:2.40.30.10 181 294 5.0E-24 T 26-04-2016 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.0E-7 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.0E-7 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.0E-7 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.0E-7 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF52540 2 191 4.53E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF46785 432 502 6.26E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 SUPERFAMILY SSF46785 504 566 1.41E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25170 9b30092422c70645028d9b959cf39e6a 641 Gene3D G3DSA:1.10.10.10 569 626 3.8E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 276 366 1.5E-24 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 PANTHER PTHR21581 1 386 1.5E-130 T 26-04-2016 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 SMART SM00936 276 366 1.3E-32 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 Gene3D G3DSA:2.60.410.10 276 366 2.6E-28 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 PANTHER PTHR21581:SF3 1 386 1.5E-130 T 26-04-2016 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 SUPERFAMILY SSF69189 276 368 8.44E-25 T 26-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 SUPERFAMILY SSF56601 8 276 3.04E-90 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 Gene3D G3DSA:3.40.710.10 29 275 1.9E-103 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 255 1.0E-87 T 26-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 4.3E-18 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 4.3E-18 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS04785 e78483486eb3301285f506dfdb9686de 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 4.3E-18 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PANTHER PTHR24423 194 523 8.5E-220 T 26-04-2016 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PANTHER PTHR24423 1 14 8.5E-220 T 26-04-2016 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.0E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.0E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 3.0E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:3.30.450.20 195 249 1.6E-4 T 26-04-2016 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00091 196 260 9.1E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:3.30.565.10 361 523 1.3E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 SUPERFAMILY SSF47384 298 372 1.77E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 374 8.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00387 416 527 6.0E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:1.10.287.130 305 360 3.0E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PANTHER PTHR24423:SF483 194 523 8.5E-220 T 26-04-2016 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 PANTHER PTHR24423:SF483 1 14 8.5E-220 T 26-04-2016 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 523 6.9E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00388 309 375 2.0E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23710 ea7302b9cc30d0a823257b74c6ab81ae 530 SUPERFAMILY SSF55874 365 523 3.93E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SMART SM00248 14 43 2300.0 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SMART SM00248 47 76 1.5E-4 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SMART SM00248 80 109 1800.0 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SMART SM00248 146 180 0.7 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SMART SM00248 113 142 0.017 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 PANTHER PTHR24188 18 209 3.8E-45 T 26-04-2016 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 SUPERFAMILY SSF48403 18 209 2.63E-47 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 Gene3D G3DSA:1.25.40.20 18 209 1.5E-49 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 Pfam PF12796 Ankyrin repeats (3 copies) 88 182 1.8E-12 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 Pfam PF12796 Ankyrin repeats (3 copies) 17 78 1.8E-6 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 PRINTS PR01415 Ankyrin repeat signature 114 129 8.1E-7 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS13095 5128af511884b82ed9b6d8fc29f5e93f 210 PRINTS PR01415 Ankyrin repeat signature 167 181 8.1E-7 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 PANTHER PTHR11228 28 250 8.0E-94 T 26-04-2016 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 PANTHER PTHR11228 272 382 8.0E-94 T 26-04-2016 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 PIRSF PIRSF037420 13 386 9.1E-140 T 26-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 Gene3D G3DSA:3.20.20.70 24 359 3.0E-72 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 Pfam PF04055 Radical SAM superfamily 33 187 2.6E-25 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 26 378 1.9E-186 T 26-04-2016 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 SMART SM00729 27 230 5.8E-4 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 PANTHER PTHR11228:SF7 28 250 8.0E-94 T 26-04-2016 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 PANTHER PTHR11228:SF7 272 382 8.0E-94 T 26-04-2016 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 Pfam PF13353 4Fe-4S single cluster domain 28 138 2.4E-10 T 26-04-2016 PAM18_RS02585 5a374e4e1973b445a1698598d7f72314 387 SUPERFAMILY SSF102114 23 351 2.09E-68 T 26-04-2016 PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 SUPERFAMILY SSF52016 1 203 4.12E-63 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.554 T 26-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 PANTHER PTHR11670 1 208 3.7E-110 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 Gene3D G3DSA:3.20.19.10 2 200 7.2E-51 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 Pfam PF00694 Aconitase C-terminal domain 1 132 2.9E-38 T 26-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 PANTHER PTHR11670:SF27 1 208 3.7E-110 T 26-04-2016 PAM18_RS09465 19e7cd6c632270b37615ef16d708edfb 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.3E-89 T 26-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 SUPERFAMILY SSF51230 584 658 1.7E-19 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Gene3D G3DSA:3.30.1490.20 132 203 5.1E-27 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 SUPERFAMILY SSF51246 333 447 1.36E-36 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 614 631 - T 26-04-2016 IPR001882 Biotin-binding site PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 PANTHER PTHR18866:SF102 1 658 0.0 T 26-04-2016 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 PANTHER PTHR18866 1 658 0.0 T 26-04-2016 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 SMART SM00878 338 444 4.3E-51 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Pfam PF00364 Biotin-requiring enzyme 591 656 1.8E-13 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 1.4E-72 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 1.3E-32 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Gene3D G3DSA:3.30.470.20 207 447 1.4E-99 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Gene3D G3DSA:2.40.50.100 588 658 2.5E-21 T 26-04-2016 PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 4.7E-47 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 SUPERFAMILY SSF52440 3 115 3.53E-51 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 Gene3D G3DSA:3.40.50.20 4 131 4.2E-54 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS10630 a0210ab01c998b5e4bfd3196f0af8f0e 661 SUPERFAMILY SSF56059 85 347 3.01E-68 T 26-04-2016 PAM18_RS27380 bd0d271f07ff8b4fb92069a259b7a6d6 662 PANTHER PTHR23028 3 499 7.6E-135 T 26-04-2016 PAM18_RS27380 bd0d271f07ff8b4fb92069a259b7a6d6 662 PANTHER PTHR23028:SF53 3 499 7.6E-135 T 26-04-2016 PAM18_RS27380 bd0d271f07ff8b4fb92069a259b7a6d6 662 Pfam PF01757 Acyltransferase family 8 326 2.0E-30 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 Gene3D G3DSA:3.60.21.10 170 271 1.8E-57 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 Gene3D G3DSA:3.60.21.10 1 132 1.8E-57 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 49.983 T 26-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 Pfam PF00149 Calcineurin-like phosphoesterase 2 150 3.6E-14 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 PIRSF PIRSF000903 1 276 4.3E-121 T 26-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 PANTHER PTHR24032 1 266 1.5E-151 T 26-04-2016 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 PANTHER PTHR24032:SF27 1 266 1.5E-151 T 26-04-2016 PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 SUPERFAMILY SSF56300 1 257 8.55E-58 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02990 fa8bb1887ac6a658e7e749f4c4b5bad4 283 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 260 1.6E-96 T 26-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 PAM18_RS18575 0180254f306236110732afd51bb41882 591 PANTHER PTHR18968:SF14 1 587 0.0 T 26-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PAM18_RS18575 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.970 3 182 4.7E-59 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS18575 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.1220 186 360 6.5E-51 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS18575 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.970 361 581 1.3E-59 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS18575 0180254f306236110732afd51bb41882 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 26-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 PAM18_RS18575 0180254f306236110732afd51bb41882 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 3.4E-33 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS18575 0180254f306236110732afd51bb41882 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 3.0E-35 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS18575 0180254f306236110732afd51bb41882 591 PANTHER PTHR18968 1 587 0.0 T 26-04-2016 PAM18_RS18575 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52518 369 567 3.13E-51 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS18575 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52467 161 350 4.24E-48 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS18575 0180254f306236110732afd51bb41882 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.6E-51 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS18575 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52518 3 184 2.4E-48 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 SUPERFAMILY SSF52016 419 600 8.63E-58 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 PANTHER PTHR21000 1 598 0.0 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 Pfam PF00920 Dehydratase family 66 597 2.8E-161 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 PANTHER PTHR21000:SF9 1 598 0.0 T 26-04-2016 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 SUPERFAMILY SSF143975 1 418 6.93E-148 T 26-04-2016 PAM18_RS09115 f841c0375159c95063d06de619888c9b 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 26-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 360 4.7E-77 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 Gene3D G3DSA:2.40.50.100 63 96 2.2E-26 T 26-04-2016 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 Gene3D G3DSA:2.40.50.100 157 192 2.2E-26 T 26-04-2016 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 PANTHER PTHR30158:SF3 1 381 3.4E-178 T 26-04-2016 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 278 2.1E-16 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 140 346 1.2E-8 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 PANTHER PTHR30158 1 381 3.4E-178 T 26-04-2016 PAM18_RS02150 bf2d815fbdb178bae72127ecfdd32dd9 383 SUPERFAMILY SSF111369 49 285 3.79E-94 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 PANTHER PTHR11806 2 625 0.0 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 Pfam PF01134 Glucose inhibited division protein A 8 399 8.4E-170 T 26-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 PANTHER PTHR11806:SF0 2 625 0.0 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 SUPERFAMILY SSF51905 97 261 2.0E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 SUPERFAMILY SSF51905 7 66 2.0E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 26-04-2016 IPR020595 MnmG-related, conserved site PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.4E-5 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.4E-5 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 Gene3D G3DSA:3.50.50.60 7 234 9.2E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 Pfam PF13932 GidA associated domain 402 614 3.7E-72 T 26-04-2016 IPR026904 GidA associated domain 3 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 SMART SM01228 544 615 1.5E-41 T 26-04-2016 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 622 42.547 T 26-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 26-04-2016 IPR020595 MnmG-related, conserved site PAM18_RS29095 16b5cd2038788c056c29a1a1029fe966 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 620 1.4E-278 T 26-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 1.1E-63 T 26-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 197 8.3E-74 T 26-04-2016 IPR013005 50S ribosomal protein uL4 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 34.093 T 26-04-2016 IPR013005 50S ribosomal protein uL4 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 PANTHER PTHR10746 10 200 1.7E-88 T 26-04-2016 IPR013005 50S ribosomal protein uL4 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 SUPERFAMILY SSF52166 6 199 1.44E-71 T 26-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PAM18_RS03430 f04d50fc81601fa1adb5c543ea51b6a5 200 Gene3D G3DSA:3.40.1370.10 52 199 4.0E-57 T 26-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 Pfam PF14849 YidC periplasmic domain 82 190 1.4E-24 T 26-04-2016 IPR028053 Membrane insertase YidC, N-terminal PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 Pfam PF14849 YidC periplasmic domain 208 380 5.4E-53 T 26-04-2016 IPR028053 Membrane insertase YidC, N-terminal PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR01900 YidC translocation/secretion protein signature 524 548 7.2E-27 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR01900 YidC translocation/secretion protein signature 505 520 7.2E-27 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR01900 YidC translocation/secretion protein signature 376 392 7.2E-27 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 571 24.547 T 26-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 288 303 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 361 381 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 452 475 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 535 558 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 499 521 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PRINTS PR00701 60kDa inner membrane protein signature 255 273 6.3E-76 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 390 569 2.6E-72 T 26-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PANTHER PTHR12428 206 573 1.5E-138 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 PANTHER PTHR12428:SF14 206 573 1.5E-138 T 26-04-2016 PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 190 1.2E-41 T 26-04-2016 IPR028053 Membrane insertase YidC, N-terminal PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 208 389 9.5E-63 T 26-04-2016 IPR028053 Membrane insertase YidC, N-terminal PAM18_RS29110 d4509eb84cd96755c75af29359a7206d 578 Pfam PF02096 60Kd inner membrane protein 391 569 2.3E-61 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 PANTHER PTHR36920 3 232 4.3E-89 T 26-04-2016 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 Gene3D G3DSA:2.40.160.20 28 232 4.6E-65 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 Pfam PF03922 OmpW family 28 232 1.2E-76 T 26-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 224 232 - T 26-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 SUPERFAMILY SSF56925 28 232 3.14E-26 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS04450 123abd61caec8e10874139fc2c9e2fd3 232 PANTHER PTHR36920:SF1 3 232 4.3E-89 T 26-04-2016 PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 PANTHER PTHR10799:SF750 51 304 3.3E-30 T 26-04-2016 PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 SMART SM00267 136 307 3.8E-58 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 303 2.0E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 Gene3D G3DSA:3.30.70.270 149 306 3.7E-52 T 26-04-2016 PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 305 7.1E-49 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 PANTHER PTHR10799 51 304 3.3E-30 T 26-04-2016 PAM18_RS09200 81a15735c3ce102e0ab20bbbf37e1412 307 SUPERFAMILY SSF55073 152 305 1.18E-47 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 PANTHER PTHR10617 2 462 2.9E-66 T 26-04-2016 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.23E-5 T 26-04-2016 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 6.23E-5 T 26-04-2016 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 Gene3D G3DSA:3.50.50.60 114 192 7.0E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 Gene3D G3DSA:3.50.50.60 303 344 7.0E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 Gene3D G3DSA:3.50.50.60 2 74 7.0E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 Pfam PF04820 Tryptophan halogenase 156 394 1.1E-7 T 26-04-2016 IPR006905 Tryptophan halogenase PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 Pfam PF04820 Tryptophan halogenase 6 74 1.5E-6 T 26-04-2016 IPR006905 Tryptophan halogenase PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 SUPERFAMILY SSF51905 308 401 1.12E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 SUPERFAMILY SSF51905 4 187 1.12E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12240 c5ff9c7bc9c5871a2a3c28ca726c1928 504 PANTHER PTHR10617:SF109 2 462 2.9E-66 T 26-04-2016 PAM18_RS14010 e807becf47f2f7980221ac30b4f83b87 391 Gene3D G3DSA:3.40.710.10 14 385 3.7E-82 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS14010 e807becf47f2f7980221ac30b4f83b87 391 PANTHER PTHR22935:SF77 12 372 5.0E-94 T 26-04-2016 PAM18_RS14010 e807becf47f2f7980221ac30b4f83b87 391 SUPERFAMILY SSF56601 13 385 1.07E-88 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS14010 e807becf47f2f7980221ac30b4f83b87 391 PANTHER PTHR22935 12 372 5.0E-94 T 26-04-2016 PAM18_RS14010 e807becf47f2f7980221ac30b4f83b87 391 Pfam PF00144 Beta-lactamase 16 376 1.7E-70 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 Gene3D G3DSA:2.60.40.10 15 165 2.4E-58 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 PANTHER PTHR10357 1 695 0.0 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 Pfam PF00128 Alpha amylase, catalytic domain 200 288 3.6E-8 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 SUPERFAMILY SSF51011 598 706 1.87E-27 T 26-04-2016 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 706 0.0 T 26-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 SMART SM00642 190 578 4.0E-6 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 107 5.1E-20 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 PANTHER PTHR10357:SF74 1 695 0.0 T 26-04-2016 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 Gene3D G3DSA:2.60.40.1180 598 706 8.0E-30 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 Gene3D G3DSA:3.20.20.80 166 587 2.0E-122 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 SUPERFAMILY SSF81296 15 158 1.4E-49 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 SUPERFAMILY SSF51445 510 587 2.19E-131 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14780 a95c97a370ba29909c24abf808d7fba4 716 SUPERFAMILY SSF51445 149 481 2.19E-131 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 PANTHER PTHR11271:SF6 29 433 5.0E-169 T 26-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 427 2.4E-186 T 26-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Pfam PF01979 Amidohydrolase family 69 430 8.7E-71 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 PANTHER PTHR11271 29 433 5.0E-169 T 26-04-2016 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51338 29 88 1.94E-10 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:3.20.20.140 80 373 2.7E-118 T 26-04-2016 PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51556 71 374 4.0E-104 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS18070 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:2.30.40.10 32 79 1.3E-8 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS07410 3c5fa5e7faad31e0fcfb4e9208878ee2 367 SUPERFAMILY SSF48230 30 361 1.46E-62 T 26-04-2016 IPR008929 Chondroitin AC/alginate lyase PAM18_RS07410 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Hamap MF_00557 Alginate lyase [algL]. 5 367 55.74 T 26-04-2016 IPR022859 Alginate lyase GO:0042122|GO:0042597|GO:0045135 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PAM18_RS07410 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Pfam PF05426 Alginate lyase 63 303 7.1E-59 T 26-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PAM18_RS07410 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Gene3D G3DSA:1.50.10.110 14 361 6.8E-99 T 26-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 Gene3D G3DSA:1.10.275.10 6 197 1.6E-53 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 SUPERFAMILY SSF48557 7 494 1.73E-162 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 PANTHER PTHR10362:SF7 7 497 1.3E-203 T 26-04-2016 PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 Gene3D G3DSA:1.20.200.10 198 503 5.0E-114 T 26-04-2016 PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 PANTHER PTHR10362 7 497 1.3E-203 T 26-04-2016 PAM18_RS26625 ad5a62f9d738564a3621277c472ed560 510 Pfam PF00221 Aromatic amino acid lyase 14 470 1.2E-160 T 26-04-2016 IPR001106 Aromatic amino acid lyase PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 PANTHER PTHR34069:SF2 1 348 3.4E-102 T 26-04-2016 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 Gene3D G3DSA:3.40.47.10 178 344 1.4E-28 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 Gene3D G3DSA:3.40.47.10 1 177 1.4E-30 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 341 1.5E-20 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 124 200 1.7E-18 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 PANTHER PTHR34069 1 348 3.4E-102 T 26-04-2016 PAM18_RS20675 ae6361fa67bf6d349298e20aaa3a4459 348 SUPERFAMILY SSF53901 7 342 5.23E-41 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.9E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.9E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.9E-18 T 26-04-2016 IPR000813 7Fe ferredoxin GO:0009055 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 Gene3D G3DSA:1.10.1060.10 47 95 5.6E-6 T 26-04-2016 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.1E-6 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 SUPERFAMILY SSF54862 3 101 3.35E-22 T 26-04-2016 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 Gene3D G3DSA:3.30.70.20 4 46 3.5E-14 T 26-04-2016 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 PANTHER PTHR11938:SF101 1 78 1.3E-48 T 26-04-2016 PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 1.6E-14 T 26-04-2016 IPR022569 Ferredoxin, C-terminal PAM18_RS11605 87b5db5063e260f18e64edbdcc31346c 112 PANTHER PTHR11938 1 78 1.3E-48 T 26-04-2016 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:3.40.50.150 54 280 1.6E-82 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 PANTHER PTHR11558 4 284 4.0E-121 T 26-04-2016 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 2 281 39.997 T 26-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 Pfam PF01564 Spermine/spermidine synthase 5 236 9.3E-81 T 26-04-2016 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:2.30.140.10 4 53 4.9E-17 T 26-04-2016 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 78 91 - T 26-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 SUPERFAMILY SSF53335 3 281 2.26E-89 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17220 67096b0a38e9b108e53e09100a4c6013 286 TIGRFAM TIGR00417 speE: spermidine synthase 4 275 9.8E-107 T 26-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 228 31.326 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PANTHER PTHR34933:SF2 1 231 1.9E-125 T 26-04-2016 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PANTHER PTHR34933 1 231 1.9E-125 T 26-04-2016 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 207 221 4.4E-26 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 144 159 4.4E-26 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.4E-26 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 191 205 4.4E-26 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 170 186 4.4E-26 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS20230 15cae870d2995e3813d2677c278f3010 231 Pfam PF02107 Flagellar L-ring protein 44 230 2.8E-61 T 26-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 PAM18_RS00480 2ae6417fec8fb0f69d35c6238c5afc99 144 Gene3D G3DSA:3.40.1000.10 3 142 1.2E-44 T 26-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PAM18_RS00480 2ae6417fec8fb0f69d35c6238c5afc99 144 SUPERFAMILY SSF55724 2 141 2.14E-47 T 26-04-2016 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PAM18_RS00480 2ae6417fec8fb0f69d35c6238c5afc99 144 Pfam PF08786 Domain of unknown function (DUF1795) 8 136 3.7E-34 T 26-04-2016 IPR014894 Protein DcrB PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 SUPERFAMILY SSF103473 7 192 9.55E-60 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 SUPERFAMILY SSF103473 251 422 9.55E-60 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 SUPERFAMILY SSF103473 476 500 9.55E-60 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 Gene3D G3DSA:1.20.1250.20 270 423 9.0E-21 T 26-04-2016 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 Gene3D G3DSA:1.20.1250.20 477 501 9.0E-21 T 26-04-2016 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 PANTHER PTHR23501:SF51 1 503 7.3E-272 T 26-04-2016 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 494 7.0E-108 T 26-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 PANTHER PTHR23501 1 503 7.3E-272 T 26-04-2016 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 Pfam PF07690 Major Facilitator Superfamily 19 412 7.7E-43 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19410 8301fe308808ced1e444b587c93da450 503 Gene3D G3DSA:1.20.1250.20 12 201 7.8E-25 T 26-04-2016 PAM18_RS01430 ef43e143add52dce1967c0948b068434 392 PANTHER PTHR11351 12 374 3.4E-231 T 26-04-2016 PAM18_RS01430 ef43e143add52dce1967c0948b068434 392 PANTHER PTHR11351:SF33 12 374 3.4E-231 T 26-04-2016 PAM18_RS01430 ef43e143add52dce1967c0948b068434 392 Pfam PF00487 Fatty acid desaturase 11 214 1.1E-12 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS01430 ef43e143add52dce1967c0948b068434 392 Pfam PF01610 Transposase 270 387 3.2E-9 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 Gene3D G3DSA:3.40.50.300 588 730 7.1E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 PANTHER PTHR10799 283 754 1.0E-180 T 26-04-2016 PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 Pfam PF00271 Helicase conserved C-terminal domain 591 700 1.4E-16 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 SUPERFAMILY SSF52540 265 501 8.96E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 Gene3D G3DSA:3.40.50.300 283 459 8.9E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 SUPERFAMILY SSF52540 502 754 2.6E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 SMART SM00490 620 700 2.3E-21 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 Pfam PF00176 SNF2 family N-terminal domain 308 573 1.3E-63 T 26-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PAM18_RS21640 15851f81d54996d7052fc9f592301ce0 761 SMART SM00487 286 470 7.9E-33 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SUPERFAMILY SSF55874 590 751 3.14E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SUPERFAMILY SSF55785 382 502 1.93E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SUPERFAMILY SSF47384 522 597 5.89E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SUPERFAMILY SSF55785 273 386 9.99E-27 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00086 340 383 4.8E-7 T 26-04-2016 IPR001610 PAC motif PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00086 462 504 21.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 PANTHER PTHR24423:SF497 224 756 4.1E-286 T 26-04-2016 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00091 391 457 2.6 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00091 158 220 49.0 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00091 268 334 2.8E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 389 3.1E-22 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Gene3D G3DSA:3.30.450.20 268 399 1.2E-32 T 26-04-2016 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Pfam PF08447 PAS fold 291 376 2.6E-15 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00387 641 753 2.3E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 751 6.8E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 SMART SM00388 526 599 5.9E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Pfam PF13188 PAS domain 392 430 0.21 T 26-04-2016 IPR000014 PAS domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 597 6.7E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Gene3D G3DSA:3.30.565.10 575 752 5.5E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 Gene3D G3DSA:3.30.450.20 400 504 2.9E-10 T 26-04-2016 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 PANTHER PTHR24423 224 756 4.1E-286 T 26-04-2016 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 698 3.7E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 712 3.7E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS03785 41aa3d1ceb8e95acf70d6e7aef243bd0 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 3.7E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 PANTHER PTHR11260:SF192 153 217 1.4E-79 T 26-04-2016 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 PANTHER PTHR11260:SF192 1 131 1.4E-79 T 26-04-2016 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 SUPERFAMILY SSF47616 139 217 1.08E-13 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 150 214 4.2E-8 T 26-04-2016 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 Gene3D G3DSA:1.20.1050.10 149 216 1.9E-9 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 PANTHER PTHR11260 153 217 1.4E-79 T 26-04-2016 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 PANTHER PTHR11260 1 131 1.4E-79 T 26-04-2016 PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 Gene3D G3DSA:3.40.30.10 2 100 7.9E-10 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 SUPERFAMILY SSF52833 4 91 1.51E-15 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05510 6657ee5dc9e59d4525d1490d9cbb12ef 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 2.3E-12 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 Gene3D G3DSA:2.40.170.20 270 884 1.9E-87 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 PANTHER PTHR30069:SF4 131 884 0.0 T 26-04-2016 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 Pfam PF00593 TonB dependent receptor 569 882 4.9E-30 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 PANTHER PTHR30069 131 884 0.0 T 26-04-2016 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 SMART SM00965 65 116 1.3E-10 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 SUPERFAMILY SSF56935 134 884 4.58E-98 T 26-04-2016 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 267 1.0E-22 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS12340 ca3ad6c0ec363aabe2ff1bd38a8be1e7 884 Gene3D G3DSA:2.170.130.10 147 269 3.0E-32 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS22685 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 SUPERFAMILY SSF56645 50 165 1.57E-11 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS22685 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 Gene3D G3DSA:2.40.110.10 75 165 6.4E-7 T 26-04-2016 PAM18_RS09440 1a38f028ec9df11dbd31a2e728cd0912 442 Gene3D G3DSA:3.40.50.1110 213 418 3.3E-34 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS09440 1a38f028ec9df11dbd31a2e728cd0912 442 SUPERFAMILY SSF52266 212 419 6.0E-51 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS09440 1a38f028ec9df11dbd31a2e728cd0912 442 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 218 413 4.2E-27 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS09440 1a38f028ec9df11dbd31a2e728cd0912 442 PANTHER PTHR30383 59 442 6.1E-145 T 26-04-2016 PAM18_RS09440 1a38f028ec9df11dbd31a2e728cd0912 442 PANTHER PTHR30383:SF3 59 442 6.1E-145 T 26-04-2016 PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.7E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.7E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.7E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 Gene3D G3DSA:3.40.50.720 5 254 2.0E-69 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 SUPERFAMILY SSF51735 10 254 9.66E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.1E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 1.9E-54 T 26-04-2016 PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PANTHER PTHR24322 19 145 7.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20190 b2f7a37c00a177b234d770f9f1273165 255 PANTHER PTHR24322 161 197 7.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PANTHER PTHR32063 1 1028 0.0 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.0E-71 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:1.10.3850.10 275 490 1.4E-57 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:1.10.3850.10 792 1006 3.9E-57 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:3.30.70.1430 43 140 4.8E-23 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 PANTHER PTHR32063:SF28 1 1028 0.0 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82693 42 130 7.67E-21 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.2E-269 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82693 267 323 1.02E-19 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82714 699 785 1.57E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82866 784 1006 4.32E-43 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:3.30.2090.10 699 784 3.3E-19 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:3.30.70.1430 557 650 5.3E-10 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82866 295 489 2.35E-48 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82714 183 264 1.27E-17 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 Gene3D G3DSA:3.30.2090.10 183 266 1.9E-19 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82693 553 650 1.2E-15 T 26-04-2016 PAM18_RS03735 e403d692b6c4152419b00747f9dc8083 1029 SUPERFAMILY SSF82693 137 181 1.02E-19 T 26-04-2016 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 SUPERFAMILY SSF51905 336 381 1.25E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 SUPERFAMILY SSF51905 12 231 1.25E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Pfam PF01266 FAD dependent oxidoreductase 13 361 3.7E-52 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Pfam PF04324 BFD-like [2Fe-2S] binding domain 400 451 8.4E-9 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS18640 10ee803069acf94e294f802886abb750 469 PANTHER PTHR13847:SF197 12 437 3.9E-97 T 26-04-2016 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Gene3D G3DSA:3.30.9.10 228 322 2.0E-10 T 26-04-2016 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Gene3D G3DSA:3.30.9.10 94 148 2.0E-10 T 26-04-2016 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Gene3D G3DSA:3.50.50.60 149 226 3.3E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Gene3D G3DSA:3.50.50.60 325 370 3.3E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 Gene3D G3DSA:3.50.50.60 11 92 3.3E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 SUPERFAMILY SSF54373 229 323 2.22E-9 T 26-04-2016 PAM18_RS18640 10ee803069acf94e294f802886abb750 469 PANTHER PTHR13847 12 437 3.9E-97 T 26-04-2016 PAM18_RS22025 ba786e4ffd83e91323a3c98d6c8e3f71 420 Gene3D G3DSA:3.40.50.300 1 210 5.9E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22025 ba786e4ffd83e91323a3c98d6c8e3f71 420 Pfam PF05707 Zonular occludens toxin (Zot) 2 212 5.5E-62 T 26-04-2016 IPR008900 Zona occludens toxin PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 Gene3D G3DSA:3.40.50.720 6 238 2.4E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 SUPERFAMILY SSF51735 6 233 3.14E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PANTHER PTHR24322:SF392 9 138 7.6E-87 T 26-04-2016 PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PANTHER PTHR24322:SF392 154 186 7.6E-87 T 26-04-2016 PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PANTHER PTHR24322 9 138 7.6E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 PANTHER PTHR24322 154 186 7.6E-87 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 0.009 T 26-04-2016 PAM18_RS25680 679f23f7991c39d7a527889f928c1e87 255 Pfam PF00106 short chain dehydrogenase 7 191 3.8E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 SUPERFAMILY SSF54975 4 90 3.05E-26 T 26-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 PANTHER PTHR10029 3 91 1.3E-28 T 26-04-2016 PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 Gene3D G3DSA:3.30.70.100 4 90 1.5E-28 T 26-04-2016 PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 Pfam PF00708 Acylphosphatase 5 88 3.4E-24 T 26-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 26-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PAM18_RS20845 0a6006965c08a0c4de53526d00d4b529 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 26-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PAM18_RS06250 09102617ce660d1f345c287e37982cbf 231 SUPERFAMILY SSF158682 76 227 2.49E-22 T 26-04-2016 IPR029024 TerB-like PAM18_RS06250 09102617ce660d1f345c287e37982cbf 231 Pfam PF04391 Protein of unknown function (DUF533) 41 223 1.8E-66 T 26-04-2016 IPR007486 Inner membrane protein YebE PAM18_RS06250 09102617ce660d1f345c287e37982cbf 231 Gene3D G3DSA:1.10.3680.10 75 226 2.5E-22 T 26-04-2016 IPR029024 TerB-like PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 PANTHER PTHR11019:SF68 67 331 7.8E-76 T 26-04-2016 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 SMART SM00342 240 323 9.5E-29 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 SUPERFAMILY SSF52317 15 205 4.07E-48 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 Gene3D G3DSA:1.10.10.60 277 325 1.2E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 PANTHER PTHR11019 67 331 7.8E-76 T 26-04-2016 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 SUPERFAMILY SSF46689 276 325 8.06E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 Pfam PF12833 Helix-turn-helix domain 246 324 1.1E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 SUPERFAMILY SSF46689 224 274 2.15E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 Gene3D G3DSA:3.40.50.880 17 230 2.2E-43 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 Gene3D G3DSA:1.10.10.60 231 276 4.2E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28120 acd9a8eeb529fb490c74ac7580ba1bac 367 Pfam PF01965 DJ-1/PfpI family 20 183 9.0E-18 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS18160 e16c6cc9a782aa915b317b0ca7ea7795 158 SUPERFAMILY SSF55826 4 152 8.5E-41 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS18160 e16c6cc9a782aa915b317b0ca7ea7795 158 PANTHER PTHR30411:SF6 1 157 2.5E-76 T 26-04-2016 PAM18_RS18160 e16c6cc9a782aa915b317b0ca7ea7795 158 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 7.7E-26 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS18160 e16c6cc9a782aa915b317b0ca7ea7795 158 Gene3D G3DSA:3.90.960.10 1 153 1.3E-48 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS18160 e16c6cc9a782aa915b317b0ca7ea7795 158 PANTHER PTHR30411 1 157 2.5E-76 T 26-04-2016 PAM18_RS24580 e41b080caf28c9fa1bbb5aca29a54b4b 271 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 50 210 2.3E-38 T 26-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 PAM18_RS24580 e41b080caf28c9fa1bbb5aca29a54b4b 271 PANTHER PTHR15362 31 170 3.0E-39 T 26-04-2016 PAM18_RS24580 e41b080caf28c9fa1bbb5aca29a54b4b 271 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 106 3.4E-13 T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS24580 e41b080caf28c9fa1bbb5aca29a54b4b 271 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 84 106 - T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 SUPERFAMILY SSF54909 64 137 3.75E-15 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 PANTHER PTHR30154:SF14 3 144 2.1E-100 T 26-04-2016 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 PANTHER PTHR30154 3 144 2.1E-100 T 26-04-2016 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 8.7E-14 T 26-04-2016 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 Gene3D G3DSA:1.10.10.10 3 53 4.0E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.8E-12 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.8E-12 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.8E-12 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 SUPERFAMILY SSF46785 2 62 8.1E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 Gene3D G3DSA:3.30.70.920 55 126 3.8E-16 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 8.9E-16 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS12415 5a82895a87e46224105514400282a2fd 145 SMART SM00344 2 108 8.0E-28 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.0E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.2E-78 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PANTHER PTHR30295 1 154 3.4E-57 T 26-04-2016 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 Pfam PF00210 Ferritin-like domain 8 143 3.5E-40 T 26-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PANTHER PTHR30295:SF9 1 154 3.4E-57 T 26-04-2016 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 SUPERFAMILY SSF47240 1 154 7.93E-54 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 PIRSF PIRSF002560 1 157 2.3E-73 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS07490 e9858ce5bdf1b8029c2df44b2926fcd5 158 Gene3D G3DSA:1.20.1260.10 1 156 1.5E-64 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 Gene3D G3DSA:1.20.1250.20 201 368 4.0E-13 T 26-04-2016 PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 Gene3D G3DSA:1.20.1250.20 6 173 3.3E-18 T 26-04-2016 PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 PANTHER PTHR23521:SF2 1 379 1.2E-122 T 26-04-2016 PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 PANTHER PTHR23521 1 379 1.2E-122 T 26-04-2016 PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 Pfam PF07690 Major Facilitator Superfamily 11 238 1.3E-14 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS27750 378cbfdc589e0f148321eaf86704169b 387 SUPERFAMILY SSF103473 3 369 5.89E-38 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF47336 934 1044 5.76E-18 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM00825 Beta-ketoacyl synthase 1033 1444 8.1E-177 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM00825 Beta-ketoacyl synthase 12 434 2.4E-188 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 383 2.4E-41 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1277 1391 6.7E-37 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 10 261 4.0E-84 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1032 1268 5.9E-80 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM01294 2303 2370 0.0012 T 26-04-2016 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM01294 940 1006 1.7E-6 T 26-04-2016 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF53901 1029 1388 4.05E-87 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF55048 658 717 7.46E-7 T 26-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF51735 1835 2020 2.52E-15 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF52151 721 811 7.59E-64 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF52151 533 660 7.59E-64 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 PANTHER PTHR11712 2325 2353 0.0 T 26-04-2016 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 PANTHER PTHR11712 10 924 0.0 T 26-04-2016 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF47336 2297 2393 7.85E-16 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1394 1483 8.7E-15 T 26-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 386 492 4.1E-15 T 26-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.366.10 719 830 5.5E-69 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.366.10 531 654 5.5E-69 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.47.10 12 273 3.9E-94 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.47.10 1033 1281 6.1E-90 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:1.10.1200.10 940 1008 1.4E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:1.10.1200.10 2299 2374 4.5E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF53901 9 130 2.66E-98 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SUPERFAMILY SSF53901 157 384 2.66E-98 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM00823 Phosphopantetheine attachment site 2302 2374 1.3E-21 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM00823 Phosphopantetheine attachment site 939 1010 2.2E-16 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF00698 Acyl transferase domain 533 834 5.9E-65 T 26-04-2016 IPR014043 Acyl transferase PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1181 1197 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 174 190 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF00550 Phosphopantetheine attachment site 941 1006 3.1E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF00550 Phosphopantetheine attachment site 2305 2370 5.9E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.47.10 274 434 1.3E-58 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Gene3D G3DSA:3.40.47.10 1282 1440 1.4E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 535 828 1.4E-90 T 26-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PAM18_RS12260 fae7926d5bb3057587fd48e3223f51fa 2421 Pfam PF08659 KR domain 2088 2197 1.5E-5 T 26-04-2016 IPR013968 Polyketide synthase, ketoreductase domain PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 Gene3D G3DSA:3.40.50.2000 320 474 2.1E-11 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 SUPERFAMILY SSF53756 229 480 2.62E-20 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526:SF397 237 443 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526:SF397 465 527 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526:SF397 22 130 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526 237 443 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526 465 527 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 PANTHER PTHR12526 22 130 1.1E-54 T 26-04-2016 PAM18_RS28505 ba6a2791555472efdcccf35161abff0f 540 Pfam PF13692 Glycosyl transferases group 1 376 459 1.9E-8 T 26-04-2016 PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 PANTHER PTHR23024 54 315 1.7E-77 T 26-04-2016 PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 PANTHER PTHR23024:SF24 54 315 1.7E-77 T 26-04-2016 PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 - T 26-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 SUPERFAMILY SSF53474 43 315 4.86E-74 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 Pfam PF07859 alpha/beta hydrolase fold 88 295 4.2E-70 T 26-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 PAM18_RS13590 277836ae5fe5100a23b9a5a738aef539 321 Gene3D G3DSA:3.40.50.1820 4 318 6.1E-90 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Pfam PF05199 GMC oxidoreductase 402 539 7.1E-37 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 296 310 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 SUPERFAMILY SSF54373 356 487 8.54E-31 T 26-04-2016 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 128 151 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 SUPERFAMILY SSF51905 51 329 1.3E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 SUPERFAMILY SSF51905 487 545 1.3E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 PANTHER PTHR11552:SF14 53 544 5.0E-181 T 26-04-2016 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Pfam PF00732 GMC oxidoreductase 53 336 3.7E-62 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Gene3D G3DSA:3.50.50.60 237 343 5.4E-92 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Gene3D G3DSA:3.50.50.60 50 175 5.4E-92 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Gene3D G3DSA:3.50.50.60 412 426 5.4E-92 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 Gene3D G3DSA:3.50.50.60 483 544 5.4E-92 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14975 65447603a50bd51814392670361a1cf6 545 PANTHER PTHR11552 53 544 5.0E-181 T 26-04-2016 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 246 4.1E-121 T 26-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Gene3D G3DSA:3.90.850.10 39 249 3.1E-75 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 PANTHER PTHR11820 5 256 1.4E-167 T 26-04-2016 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 SUPERFAMILY SSF56529 39 249 7.85E-71 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 PANTHER PTHR11820:SF8 5 256 1.4E-167 T 26-04-2016 PAM18_RS04160 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 244 3.3E-57 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS14050 c027b42d00783cd357e4e58c4f2f9d22 288 SUPERFAMILY SSF161098 86 269 1.31E-23 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14050 c027b42d00783cd357e4e58c4f2f9d22 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 283 1.1E-11 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14050 c027b42d00783cd357e4e58c4f2f9d22 288 PANTHER PTHR30151 5 288 6.4E-150 T 26-04-2016 PAM18_RS14050 c027b42d00783cd357e4e58c4f2f9d22 288 PANTHER PTHR30151:SF16 5 288 6.4E-150 T 26-04-2016 PAM18_RS14050 c027b42d00783cd357e4e58c4f2f9d22 288 Gene3D G3DSA:1.10.3720.10 90 278 1.0E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 Pfam PF08496 Peptidase family S49 N-terminal 2 148 1.7E-53 T 26-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 Pfam PF01343 Peptidase family S49 152 300 3.1E-44 T 26-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 SUPERFAMILY SSF52096 88 199 9.85E-28 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 SUPERFAMILY SSF52096 230 289 9.85E-28 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 PANTHER PTHR33209 2 340 2.7E-203 T 26-04-2016 PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 Gene3D G3DSA:3.90.226.10 261 297 2.3E-33 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 Gene3D G3DSA:3.90.226.10 88 195 2.3E-33 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16455 c6c6a0e26fa61665b1dd3a92e54d4302 341 PANTHER PTHR33209:SF2 2 340 2.7E-203 T 26-04-2016 PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 Pfam PF01728 FtsJ-like methyltransferase 182 274 2.5E-8 T 26-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 PANTHER PTHR37524:SF2 1 352 4.8E-191 T 26-04-2016 PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 SUPERFAMILY SSF53335 181 274 2.61E-13 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 PANTHER PTHR37524 1 352 4.8E-191 T 26-04-2016 PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 Gene3D G3DSA:3.40.50.150 180 274 1.6E-14 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 PIRSF PIRSF028774 1 352 2.8E-169 T 26-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PAM18_RS17855 40f0e9b452475a81ced7f22398fbec4e 352 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 350 75.524 T 26-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 PANTHER PTHR18968 4 574 0.0 T 26-04-2016 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52467 189 360 4.36E-62 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.970 354 557 4.5E-72 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 165 2.1E-60 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52518 374 567 5.31E-65 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.970 4 176 3.4E-74 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.1220 190 353 2.2E-61 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 6.8E-49 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 4.6E-258 T 26-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.2E-41 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52518 4 179 1.3E-65 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS24595 f84c58e90485a051c87b2170070c3456 574 PANTHER PTHR18968:SF116 4 574 0.0 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PANTHER PTHR22617:SF6 205 752 3.9E-293 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PANTHER PTHR22617:SF6 1 152 3.9E-293 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:2.40.50.180 639 701 1.2E-14 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:1.20.120.160 4 144 1.1E-45 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:2.30.30.40 702 745 1.7E-23 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:2.30.30.40 615 636 1.7E-23 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 614 9.3E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SUPERFAMILY SSF47226 6 128 3.14E-33 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 368 427 5.0E-14 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PANTHER PTHR22617 205 752 3.9E-293 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PANTHER PTHR22617 1 152 3.9E-293 T 26-04-2016 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SMART SM00073 6 103 3.0E-19 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Pfam PF01584 CheW-like domain 621 748 2.2E-24 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Pfam PF01627 Hpt domain 8 100 8.1E-18 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SMART SM01231 367 427 9.7E-19 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SUPERFAMILY SSF55874 430 613 7.47E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:3.30.565.10 429 614 6.8E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SUPERFAMILY SSF50341 614 746 5.36E-32 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 Gene3D G3DSA:1.10.287.560 367 428 4.5E-19 T 26-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SUPERFAMILY SSF47384 368 428 5.89E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SMART SM00387 472 615 1.0E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 SMART SM00260 607 746 8.6E-43 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 4.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 4.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 4.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18795 e84cb164c378dd0ff302e60152b0bf59 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 612 4.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12030 200f724f8651d8999251fe7d9a0b7f52 273 Pfam PF00263 Bacterial type II and III secretion system protein 137 248 1.5E-7 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS12030 200f724f8651d8999251fe7d9a0b7f52 273 Pfam PF03958 Bacterial type II/III secretion system short domain 26 83 2.8E-10 T 26-04-2016 IPR005644 NolW-like PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423 193 255 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423 20 59 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423 322 609 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 Gene3D G3DSA:1.10.287.130 378 442 9.6E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 Gene3D G3DSA:3.30.565.10 448 595 2.2E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 SUPERFAMILY SSF103190 68 203 2.35E-19 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423:SF469 193 255 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423:SF469 20 59 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PANTHER PTHR24423:SF469 322 609 1.1E-227 T 26-04-2016 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 SMART SM00388 378 446 4.9E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 SUPERFAMILY SSF47384 366 442 1.9E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 SMART SM00387 488 599 1.4E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 Pfam PF02743 Cache domain 47 276 2.9E-15 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 SUPERFAMILY SSF55874 437 595 1.28E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 378 442 1.4E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PIRSF PIRSF036431 4 605 6.2E-209 T 26-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 1.2E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 1.2E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 1.2E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27010 c4e8535dd3c96141c2119c86fb42ecce 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 596 2.7E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.360 28 151 4.5E-40 T 26-04-2016 IPR008962 PapD-like PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.1070 153 244 7.9E-11 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49354 24 150 1.41E-39 T 26-04-2016 IPR008962 PapD-like PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 239 3.1E-12 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PANTHER PTHR30251:SF8 13 247 2.2E-134 T 26-04-2016 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 106 123 2.3E-27 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 78 99 2.3E-27 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 29 38 2.3E-27 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 171 186 2.3E-27 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 132 147 2.3E-27 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 PANTHER PTHR30251 13 247 2.2E-134 T 26-04-2016 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 2.2E-40 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS14945 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49584 154 246 2.88E-13 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 Pfam PF01145 SPFH domain / Band 7 family 334 552 5.0E-38 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 SMART SM00244 330 535 2.9E-4 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 PANTHER PTHR10264 417 657 1.1E-148 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 PANTHER PTHR10264 251 363 1.1E-148 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 SUPERFAMILY SSF117892 431 540 4.71E-11 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 PANTHER PTHR10264:SF80 417 657 1.1E-148 T 26-04-2016 PAM18_RS13355 f7dcdf8f3c395325a674f80261085c5c 666 PANTHER PTHR10264:SF80 251 363 1.1E-148 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 Gene3D G3DSA:3.40.50.2000 2 193 3.6E-68 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 Gene3D G3DSA:3.40.50.2000 253 332 9.6E-6 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 339 9.7E-36 T 26-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 SUPERFAMILY SSF53756 4 355 8.38E-116 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 PANTHER PTHR21015 4 356 1.4E-124 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 PANTHER PTHR21015:SF22 4 356 1.4E-124 T 26-04-2016 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 350 1.2E-110 T 26-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 7.7E-41 T 26-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS23010 849e9663e3cf77b15f8bbbb7cd4a6151 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 355 36.828 T 26-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 PANTHER PTHR11699:SF97 1 506 0.0 T 26-04-2016 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 Gene3D G3DSA:3.40.309.10 270 469 2.3E-61 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 3.1E-163 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 SUPERFAMILY SSF53720 12 497 1.01E-161 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 PANTHER PTHR11699 1 506 0.0 T 26-04-2016 PAM18_RS15690 d85974478028dd05e7cffda104f3235a 506 Gene3D G3DSA:3.40.605.10 18 269 5.6E-92 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS22435 f3778d931b71521c7932581762bbcd87 303 PANTHER PTHR35007 1 303 3.2E-93 T 26-04-2016 PAM18_RS22435 f3778d931b71521c7932581762bbcd87 303 Pfam PF00482 Type II secretion system (T2SS), protein F 159 287 3.4E-15 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS22435 f3778d931b71521c7932581762bbcd87 303 PANTHER PTHR35007:SF2 1 303 3.2E-93 T 26-04-2016 PAM18_RS05475 d7f270096b306471d65c376b510f1feb 215 Gene3D G3DSA:3.40.50.1820 9 214 6.7E-63 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05475 d7f270096b306471d65c376b510f1feb 215 PANTHER PTHR10655:SF17 12 214 2.8E-64 T 26-04-2016 PAM18_RS05475 d7f270096b306471d65c376b510f1feb 215 Pfam PF02230 Phospholipase/Carboxylesterase 12 213 5.4E-45 T 26-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 PAM18_RS05475 d7f270096b306471d65c376b510f1feb 215 PANTHER PTHR10655 12 214 2.8E-64 T 26-04-2016 PAM18_RS05475 d7f270096b306471d65c376b510f1feb 215 SUPERFAMILY SSF53474 9 215 4.4E-47 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17330 78ba80797eb4176a46b8b1f831bc9cdd 168 PANTHER PTHR37625:SF1 2 156 6.5E-83 T 26-04-2016 PAM18_RS17330 78ba80797eb4176a46b8b1f831bc9cdd 168 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 151 1.1E-42 T 26-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN PAM18_RS17330 78ba80797eb4176a46b8b1f831bc9cdd 168 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 154 3.6E-47 T 26-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN PAM18_RS17330 78ba80797eb4176a46b8b1f831bc9cdd 168 PANTHER PTHR37625 2 156 6.5E-83 T 26-04-2016 PAM18_RS01035 d6abc9a2ab46de7d270847ffe7d0c219 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 53.549 T 26-04-2016 IPR009662 Malonate decarboxylase delta subunit PAM18_RS01035 d6abc9a2ab46de7d270847ffe7d0c219 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 2.5E-35 T 26-04-2016 IPR009662 Malonate decarboxylase delta subunit PAM18_RS01035 d6abc9a2ab46de7d270847ffe7d0c219 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 96 4.0E-26 T 26-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein PAM18_RS01035 d6abc9a2ab46de7d270847ffe7d0c219 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 7.0E-39 T 26-04-2016 IPR009662 Malonate decarboxylase delta subunit PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 PANTHER PTHR10173:SF36 1 208 1.5E-112 T 26-04-2016 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 PANTHER PTHR10173 1 208 1.5E-112 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 SUPERFAMILY SSF55068 10 213 2.35E-79 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 Pfam PF01625 Peptide methionine sulfoxide reductase 52 204 3.7E-64 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 49 210 36.832 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 Gene3D G3DSA:3.30.1060.10 12 204 6.9E-78 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PAM18_RS26255 c1bde11c3e5ad32b196f3936f11d602b 215 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 51 204 3.6E-65 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 SUPERFAMILY SSF46785 22 89 1.21E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 Gene3D G3DSA:1.10.10.10 11 86 8.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 Pfam PF07729 FCD domain 95 217 4.6E-23 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 SMART SM00895 95 218 8.8E-21 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 PANTHER PTHR11751 24 111 1.1E-24 T 26-04-2016 PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 85 4.2E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 SUPERFAMILY SSF48008 91 219 8.11E-28 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 Gene3D G3DSA:1.20.120.530 88 223 5.3E-32 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS18485 3fd86c64ac22b7b68002004116af678c 259 SMART SM00345 27 85 7.6E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SUPERFAMILY SSF52172 1 177 7.18E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00072 Response regulator receiver domain 4 112 2.5E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 PANTHER PTHR26402 1 223 2.5E-122 T 26-04-2016 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 6.6E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:3.40.50.2300 1 122 3.0E-36 T 26-04-2016 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00448 1 112 2.2E-40 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:1.10.10.10 125 221 1.2E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00862 145 220 5.4E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS19695 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 PANTHER PTHR26402:SF600 1 223 2.5E-122 T 26-04-2016 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.768 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SUPERFAMILY SSF48150 3 208 1.88E-73 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.1670.10 123 208 2.9E-36 T 26-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 7.6E-10 T 26-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 PANTHER PTHR10359:SF18 1 212 4.3E-91 T 26-04-2016 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.8E-4 T 26-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00525 186 206 5.2E-5 T 26-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.340.30 24 122 1.1E-35 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 PIRSF PIRSF001435 1 212 1.9E-52 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.3E-20 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00478 38 185 1.8E-59 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.6E-86 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 PAM18_RS07580 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 PANTHER PTHR10359 1 212 4.3E-91 T 26-04-2016 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 SUPERFAMILY SSF47729 1 90 2.65E-31 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-32 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 26-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 PANTHER PTHR33175 1 90 4.1E-39 T 26-04-2016 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-16 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-16 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-16 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 Gene3D G3DSA:4.10.520.10 1 90 1.8E-34 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS27935 6ef67f0f273137b64cc28549bf24951c 90 SMART SM00411 1 90 3.5E-38 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 SUPERFAMILY SSF111369 51 252 1.44E-24 T 26-04-2016 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 PANTHER PTHR30572:SF3 11 383 4.9E-143 T 26-04-2016 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 264 4.3E-39 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 PANTHER PTHR30572 11 383 4.9E-143 T 26-04-2016 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.50.100 62 94 2.8E-18 T 26-04-2016 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.50.100 183 214 2.8E-18 T 26-04-2016 PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 3.2E-20 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS13640 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:1.20.1600.10 110 175 4.2E-4 T 26-04-2016 PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 PANTHER PTHR12289:SF39 1 233 1.2E-144 T 26-04-2016 PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF47616 158 229 6.55E-10 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 PANTHER PTHR12289 1 233 1.2E-144 T 26-04-2016 PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 Gene3D G3DSA:1.20.1050.10 153 229 2.0E-7 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 1.9E-26 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 Gene3D G3DSA:3.40.30.10 15 82 8.8E-6 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF52833 1 102 4.9E-13 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05495 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17171 Glutathione S-transferase, C-terminal domain 164 226 2.6E-16 T 26-04-2016 IPR033468 Metaxin, glutathione S-transferase domain PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 Gene3D G3DSA:3.90.79.10 2 147 8.7E-35 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 SUPERFAMILY SSF55811 4 143 4.74E-28 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 PANTHER PTHR22769:SF14 3 139 1.3E-34 T 26-04-2016 PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 PANTHER PTHR22769 3 139 1.3E-34 T 26-04-2016 PAM18_RS12070 59b989225fb870adccdb931950f6b5a7 156 Pfam PF00293 NUDIX domain 4 119 1.3E-16 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Pfam PF13432 Tetratricopeptide repeat 501 559 8.6E-8 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Pfam PF13432 Tetratricopeptide repeat 430 493 4.7E-5 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Pfam PF13432 Tetratricopeptide repeat 304 347 0.0026 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 PANTHER PTHR23083 57 569 1.5E-90 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Gene3D G3DSA:1.25.40.10 356 559 2.6E-31 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Gene3D G3DSA:1.25.40.10 223 347 1.6E-18 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Gene3D G3DSA:1.25.40.10 93 211 1.2E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 PANTHER PTHR23083:SF195 57 569 1.5E-90 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SUPERFAMILY SSF48452 391 559 1.75E-23 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Pfam PF14559 Tetratricopeptide repeat 233 290 6.8E-11 T 26-04-2016 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 Pfam PF07721 Tetratricopeptide repeat 190 211 0.075 T 26-04-2016 IPR011717 Tetratricopeptide TPR-4 GO:0042802 UniPathway: UPA00694 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SUPERFAMILY SSF48452 133 439 3.37E-19 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 458 492 120.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 390 423 120.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 355 388 160.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 493 526 0.055 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 424 457 170.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 220 253 96.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS24340 2fd9e5922d5e8a41cf494ac11d229403 575 SMART SM00028 288 321 170.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 PANTHER PTHR10992 5 291 6.0E-109 T 26-04-2016 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 Pfam PF12697 Alpha/beta hydrolase family 38 283 5.6E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 Gene3D G3DSA:3.40.50.1820 14 293 4.2E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 PANTHER PTHR10992:SF800 5 291 6.0E-109 T 26-04-2016 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 266 288 1.4E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 42 60 1.4E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.4E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS07895 c8c024256b4135b56ac64ddd3f65eeef 298 SUPERFAMILY SSF53474 13 288 7.28E-57 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 Pfam PF13531 Bacterial extracellular solute-binding protein 35 282 1.4E-44 T 26-04-2016 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 SUPERFAMILY SSF53850 22 330 1.26E-88 T 26-04-2016 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 26-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 PANTHER PTHR30368:SF2 6 332 4.1E-191 T 26-04-2016 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 20 328 3.5E-141 T 26-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 PANTHER PTHR30368 6 332 4.1E-191 T 26-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 24 170 1.3E-50 T 26-04-2016 PAM18_RS01415 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 175 297 2.1E-29 T 26-04-2016 PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 SMART SM00450 158 278 5.2E-11 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 SMART SM00450 7 135 2.5E-17 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 SUPERFAMILY SSF52821 163 283 1.44E-31 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 SUPERFAMILY SSF52821 2 156 3.14E-39 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 Pfam PF00581 Rhodanese-like domain 8 132 9.1E-16 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 Pfam PF00581 Rhodanese-like domain 163 273 1.4E-10 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 PANTHER PTHR11364:SF0 1 283 1.1E-97 T 26-04-2016 PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 Gene3D G3DSA:3.40.250.10 153 284 8.0E-36 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 Gene3D G3DSA:3.40.250.10 2 152 1.1E-47 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19115 c56b64c4067be1b250e6c58e36655d30 284 PANTHER PTHR11364 1 283 1.1E-97 T 26-04-2016 PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 PANTHER PTHR10264:SF80 2 294 1.4E-101 T 26-04-2016 PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 PANTHER PTHR10264 2 294 1.4E-101 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 PIRSF PIRSF005651 31 335 5.7E-90 T 26-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 SMART SM00244 53 227 3.4E-9 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 Pfam PF01145 SPFH domain / Band 7 family 57 242 1.1E-29 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13360 3cbef94cb77e3bbf03e50954fcaaf564 343 SUPERFAMILY SSF117892 89 232 2.09E-13 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS21815 35151979f806c6d400135eb20db8afe9 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 141 2.7E-32 T 26-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC PAM18_RS21815 35151979f806c6d400135eb20db8afe9 151 PANTHER PTHR35867 2 151 6.8E-42 T 26-04-2016 PAM18_RS21815 35151979f806c6d400135eb20db8afe9 151 PANTHER PTHR35867:SF1 2 151 6.8E-42 T 26-04-2016 PAM18_RS21815 35151979f806c6d400135eb20db8afe9 151 PIRSF PIRSF004923 1 150 1.2E-42 T 26-04-2016 IPR026268 Protein RseC PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 6.3E-187 T 26-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 286 3.7E-12 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 341 44.255 T 26-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:3.30.60.70 132 172 7.0E-17 T 26-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:2.160.10.10 173 341 2.4E-33 T 26-04-2016 PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 SUPERFAMILY SSF51161 101 306 3.33E-37 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS06480 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 1.0E-15 T 26-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PANTHER PTHR24322 166 198 1.5E-100 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PANTHER PTHR24322 18 150 1.5E-100 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.5E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.5E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.5E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.5E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 SUPERFAMILY SSF51735 12 243 3.61E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 Gene3D G3DSA:3.40.50.720 9 244 2.0E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 Pfam PF00106 short chain dehydrogenase 15 207 1.8E-49 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PANTHER PTHR24322:SF337 166 198 1.5E-100 T 26-04-2016 PAM18_RS09220 7ca5c0fcc6b7801b7e0d910d2513908b 246 PANTHER PTHR24322:SF337 18 150 1.5E-100 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 SUPERFAMILY SSF53850 1 252 9.31E-69 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 SMART SM00079 32 252 0.0085 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 PANTHER PTHR18966:SF191 10 257 1.6E-96 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 6.5E-60 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 Gene3D G3DSA:3.40.190.10 111 204 2.5E-18 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 PANTHER PTHR18966 10 257 1.6E-96 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 SMART SM00062 32 253 5.5E-63 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 Gene3D G3DSA:3.40.190.10 212 253 1.7E-38 T 26-04-2016 PAM18_RS14540 1c906324b22d9eebebca43e3ac7ad353 268 Gene3D G3DSA:3.40.190.10 29 110 1.7E-38 T 26-04-2016 PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 SUPERFAMILY SSF69572 91 438 4.05E-96 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 PANTHER PTHR10953 92 472 1.7E-125 T 26-04-2016 PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 SUPERFAMILY SSF54285 15 87 3.71E-9 T 26-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Gene3D G3DSA:3.10.20.30 3 81 2.5E-9 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Pfam PF00581 Rhodanese-like domain 378 463 3.7E-12 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Pfam PF02597 ThiS family 6 87 8.2E-6 T 26-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Gene3D G3DSA:3.40.50.720 93 338 1.9E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Gene3D G3DSA:3.40.250.10 361 464 5.1E-23 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 SMART SM00450 372 467 9.6E-13 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 Pfam PF00899 ThiF family 103 336 2.1E-67 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS15085 c4f12d4165786a5db07fdb6d28d5e389 472 PANTHER PTHR10953:SF153 92 472 1.7E-125 T 26-04-2016 PAM18_RS18805 e4c78227121c01464a9c7be2d9dee10d 128 Gene3D G3DSA:3.40.50.2300 3 125 1.9E-39 T 26-04-2016 PAM18_RS18805 e4c78227121c01464a9c7be2d9dee10d 128 SMART SM00448 5 119 4.9E-35 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18805 e4c78227121c01464a9c7be2d9dee10d 128 SUPERFAMILY SSF52172 3 125 1.27E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS18805 e4c78227121c01464a9c7be2d9dee10d 128 Pfam PF00072 Response regulator receiver domain 7 120 3.5E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18805 e4c78227121c01464a9c7be2d9dee10d 128 PANTHER PTHR26402 5 125 9.4E-43 T 26-04-2016 PAM18_RS22200 395c720d17d57d0aacd49244696eaac7 200 Pfam PF05598 Transposase domain (DUF772) 93 143 5.1E-11 T 26-04-2016 IPR008490 Transposase InsH, N-terminal PAM18_RS22200 395c720d17d57d0aacd49244696eaac7 200 SUPERFAMILY SSF143120 7 51 2.88E-5 T 26-04-2016 PAM18_RS22200 395c720d17d57d0aacd49244696eaac7 200 Gene3D G3DSA:3.40.1620.10 7 47 2.3E-6 T 26-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PAM18_RS20030 8144b180d76f136061c650fbff930e07 382 Gene3D G3DSA:2.120.10.30 23 378 2.7E-104 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS20030 8144b180d76f136061c650fbff930e07 382 Pfam PF07995 Glucose / Sorbosone dehydrogenase 46 377 9.6E-137 T 26-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 PAM18_RS20030 8144b180d76f136061c650fbff930e07 382 SUPERFAMILY SSF50952 37 379 8.89E-45 T 26-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PAM18_RS20030 8144b180d76f136061c650fbff930e07 382 PANTHER PTHR19328 37 379 9.8E-86 T 26-04-2016 PAM18_RS03625 b517c546112d699e4ec41c752a5b2dc8 251 Gene3D G3DSA:3.40.50.1820 10 240 2.6E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03625 b517c546112d699e4ec41c752a5b2dc8 251 SUPERFAMILY SSF53474 5 240 7.05E-46 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03625 b517c546112d699e4ec41c752a5b2dc8 251 PANTHER PTHR11487 1 250 1.1E-118 T 26-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 PAM18_RS03625 b517c546112d699e4ec41c752a5b2dc8 251 PANTHER PTHR11487:SF3 1 250 1.1E-118 T 26-04-2016 PAM18_RS03625 b517c546112d699e4ec41c752a5b2dc8 251 Pfam PF00975 Thioesterase domain 18 237 2.5E-60 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 518 593 3.1E-5 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 411 429 2.0E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 337 355 2.0E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 382 400 2.0E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 444 458 2.0E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 SUPERFAMILY SSF52540 283 588 4.94E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 Gene3D G3DSA:1.10.8.60 528 600 3.3E-4 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 SMART SM00382 333 478 2.5E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 SMART SM01086 515 606 0.0012 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638:SF18 179 209 4.7E-108 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638:SF18 288 609 4.7E-108 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638:SF18 69 112 4.7E-108 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 Pfam PF07724 AAA domain (Cdc48 subfamily) 333 506 4.6E-32 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 Gene3D G3DSA:3.40.50.300 491 527 1.4E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 Gene3D G3DSA:3.40.50.300 288 457 1.4E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638 179 209 4.7E-108 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638 288 609 4.7E-108 T 26-04-2016 PAM18_RS11555 67af372bb06dac2de7f9806ceed4c2e7 609 PANTHER PTHR11638 69 112 4.7E-108 T 26-04-2016 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:2.60.120.10 13 69 6.9E-5 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF51182 13 179 7.97E-7 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 151 199 1.12E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 151 202 2.4E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 Pfam PF12833 Helix-turn-helix domain 171 249 7.1E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 PANTHER PTHR11019 10 249 9.6E-101 T 26-04-2016 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 203 249 9.7E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 PANTHER PTHR11019:SF39 10 249 9.6E-101 T 26-04-2016 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 201 249 1.52E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21740 ae152afab6898fbf9baddc8946df84f1 250 SMART SM00342 165 248 1.4E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 Pfam PF02311 AraC-like ligand binding domain 18 146 1.4E-27 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 Pfam PF12833 Helix-turn-helix domain 191 266 5.0E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 PANTHER PTHR11019:SF111 8 271 6.0E-208 T 26-04-2016 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 SMART SM00342 183 265 5.3E-17 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 Gene3D G3DSA:1.10.10.60 220 264 1.3E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 PANTHER PTHR11019 8 271 6.0E-208 T 26-04-2016 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 SUPERFAMILY SSF46689 219 266 2.64E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 SUPERFAMILY SSF46689 170 217 4.93E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 SUPERFAMILY SSF51215 24 135 1.22E-21 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 Gene3D G3DSA:2.60.120.280 21 132 9.4E-13 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13140 ad9123baa0e7c61b55479ac4956e4ffc 271 Gene3D G3DSA:1.10.10.60 170 219 6.5E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08770 b220501c0f1027f51252720d0c3b9614 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 239 2.4E-15 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS08770 b220501c0f1027f51252720d0c3b9614 248 SUPERFAMILY SSF53850 19 240 2.56E-31 T 26-04-2016 PAM18_RS08770 b220501c0f1027f51252720d0c3b9614 248 Gene3D G3DSA:3.40.190.10 19 126 6.0E-9 T 26-04-2016 PAM18_RS08770 b220501c0f1027f51252720d0c3b9614 248 Gene3D G3DSA:3.40.190.10 127 191 8.8E-7 T 26-04-2016 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 Pfam PF03466 LysR substrate binding domain 95 289 6.6E-23 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 Gene3D G3DSA:1.10.10.10 11 86 6.4E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 PANTHER PTHR30537 4 306 1.6E-105 T 26-04-2016 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 Gene3D G3DSA:3.40.190.10 165 259 2.8E-15 T 26-04-2016 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 SUPERFAMILY SSF53850 97 294 4.52E-26 T 26-04-2016 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 SUPERFAMILY SSF46785 5 118 8.17E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.2E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 PANTHER PTHR30537:SF26 4 306 1.6E-105 T 26-04-2016 PAM18_RS13670 e752b7ae3db507c550dc0269b805d6c2 306 Gene3D G3DSA:3.40.190.10 93 138 3.3E-4 T 26-04-2016 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 493 812 2.7E-105 T 26-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 SUPERFAMILY SSF82861 830 914 2.22E-7 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 Gene3D G3DSA:2.30.30.60 931 980 8.1E-17 T 26-04-2016 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 PANTHER PTHR30347:SF2 1 1104 0.0 T 26-04-2016 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 Gene3D G3DSA:3.30.70.100 986 1070 1.8E-17 T 26-04-2016 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 Pfam PF00924 Mechanosensitive ion channel 873 1071 1.4E-51 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 SUPERFAMILY SSF50182 916 981 4.58E-17 T 26-04-2016 IPR010920 LSM domain PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 SUPERFAMILY SSF82689 983 1083 3.79E-21 T 26-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 Pfam PF12795 Mechanosensitive ion channel porin domain 38 273 3.2E-55 T 26-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 PANTHER PTHR30347 1 1104 0.0 T 26-04-2016 PAM18_RS26275 5caed29338a98a5745bfa7a241d08bcf 1118 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 945 979 - T 26-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PAM18_RS00425 a0c8fc5bd00646490e62458c1fb6d04d 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 163 4.4E-56 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS00425 a0c8fc5bd00646490e62458c1fb6d04d 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 3.1E-58 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS00425 a0c8fc5bd00646490e62458c1fb6d04d 172 PANTHER PTHR35850:SF1 2 171 3.2E-108 T 26-04-2016 PAM18_RS00425 a0c8fc5bd00646490e62458c1fb6d04d 172 PIRSF PIRSF028301 3 172 7.7E-59 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS00425 a0c8fc5bd00646490e62458c1fb6d04d 172 PANTHER PTHR35850 2 171 3.2E-108 T 26-04-2016 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 SUPERFAMILY SSF88946 8 77 3.26E-13 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 PANTHER PTHR30173 8 163 2.0E-41 T 26-04-2016 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 SUPERFAMILY SSF88659 89 167 1.38E-13 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 Pfam PF04542 Sigma-70 region 2 15 79 2.4E-13 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 Gene3D G3DSA:1.10.10.10 108 165 4.0E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 Pfam PF08281 Sigma-70, region 4 111 163 2.4E-15 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 163 5.0E-21 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 PANTHER PTHR30173:SF9 8 163 2.0E-41 T 26-04-2016 PAM18_RS02390 9443d87a751eae16d094addd4c40f861 172 Gene3D G3DSA:1.10.1740.10 12 80 2.8E-10 T 26-04-2016 PAM18_RS08050 a195eccf3e3de5067f81a29ccf4dc601 377 Pfam PF12698 ABC-2 family transporter protein 22 361 1.4E-27 T 26-04-2016 PAM18_RS08050 a195eccf3e3de5067f81a29ccf4dc601 377 PANTHER PTHR30294:SF2 1 377 1.5E-181 T 26-04-2016 PAM18_RS08050 a195eccf3e3de5067f81a29ccf4dc601 377 PANTHER PTHR30294 1 377 1.5E-181 T 26-04-2016 PAM18_RS08050 a195eccf3e3de5067f81a29ccf4dc601 377 Gene3D G3DSA:3.40.1710.10 44 163 3.5E-4 T 26-04-2016 PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 Gene3D G3DSA:3.90.1150.10 245 369 1.2E-25 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 SUPERFAMILY SSF53383 5 369 1.04E-98 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 PANTHER PTHR30244 1 373 1.3E-165 T 26-04-2016 PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 364 6.1E-100 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 PANTHER PTHR30244:SF9 1 373 1.3E-165 T 26-04-2016 PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 Gene3D G3DSA:3.40.640.10 16 243 3.2E-68 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS20205 93c97c319e6c3aafac2233c1c42f7500 378 PIRSF PIRSF000390 1 372 1.5E-102 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.3E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.3E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.3E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 Pfam PF00106 short chain dehydrogenase 6 195 1.2E-54 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 SUPERFAMILY SSF51735 1 255 3.54E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PANTHER PTHR24322 10 136 3.6E-58 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PANTHER PTHR24322 152 184 3.6E-58 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PANTHER PTHR24322:SF330 10 136 3.6E-58 T 26-04-2016 PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PANTHER PTHR24322:SF330 152 184 3.6E-58 T 26-04-2016 PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.2E-37 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 Gene3D G3DSA:3.40.50.720 2 255 5.8E-79 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15595 01481aa1b37ce008a869e22223e7d313 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 3.2E-102 T 26-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 SMART SM00382 4 183 0.0019 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 201 5.4E-106 T 26-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 2.7E-35 T 26-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 PANTHER PTHR31715 4 202 6.2E-132 T 26-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 Gene3D G3DSA:3.40.50.300 5 196 2.3E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 48.063 T 26-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 PIRSF PIRSF005624 2 203 1.4E-46 T 26-04-2016 PAM18_RS25610 8dbd58077ccb664652e3c36e743b7454 204 SUPERFAMILY SSF52540 3 197 1.79E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25355 ab7f80817cb4d4f02d0fc7e8434435ca 356 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 34 356 9.0E-163 T 26-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 PAM18_RS25355 ab7f80817cb4d4f02d0fc7e8434435ca 356 PIRSF PIRSF029693 1 356 3.5E-220 T 26-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657 199 250 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657 1 166 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657 281 516 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 SUPERFAMILY SSF109998 199 236 4.84E-31 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 SUPERFAMILY SSF109998 40 167 4.84E-31 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657:SF11 199 250 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657:SF11 1 166 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 PANTHER PTHR10657:SF11 281 516 7.6E-181 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 Pfam PF13624 SurA N-terminal domain 1 163 5.4E-44 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 26-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 Gene3D G3DSA:3.10.50.40 261 385 1.1E-41 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 SUPERFAMILY SSF54534 262 362 2.42E-32 T 26-04-2016 PAM18_RS16590 b40b9751bde62eb31434ac2959ffec90 621 Pfam PF13616 PPIC-type PPIASE domain 261 360 1.7E-28 T 26-04-2016 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF46785 7 85 5.8E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:3.40.190.10 184 267 2.5E-24 T 26-04-2016 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:1.10.10.10 7 90 7.4E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:3.40.190.10 98 183 4.4E-9 T 26-04-2016 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 7.8E-13 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF03466 LysR substrate binding domain 96 297 3.3E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 PANTHER PTHR30346 5 297 4.9E-89 T 26-04-2016 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF53850 97 297 5.43E-28 T 26-04-2016 PAM18_RS01070 eadf80ad184c48c81da7ba8ea9fc7793 309 PANTHER PTHR30346:SF0 5 297 4.9E-89 T 26-04-2016 PAM18_RS12550 8e5824e077ea5d431368928a195c0416 285 SUPERFAMILY SSF51306 149 274 1.92E-15 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS12550 8e5824e077ea5d431368928a195c0416 285 PANTHER PTHR40661 122 263 6.3E-12 T 26-04-2016 PAM18_RS12550 8e5824e077ea5d431368928a195c0416 285 Gene3D G3DSA:2.10.109.10 150 278 1.1E-10 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS12550 8e5824e077ea5d431368928a195c0416 285 Pfam PF00717 Peptidase S24-like 201 263 6.5E-9 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 1.4E-33 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 8.5E-35 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 PIRSF PIRSF004555 2 108 1.2E-37 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.277 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 Gene3D G3DSA:3.30.1310.10 1 108 4.2E-49 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 SUPERFAMILY SSF82607 10 102 5.89E-36 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 PANTHER PTHR33449:SF1 1 108 8.8E-49 T 26-04-2016 PAM18_RS18010 6ba06b9950648442ad3eb38e5d453384 108 PANTHER PTHR33449 1 108 8.8E-49 T 26-04-2016 PAM18_RS28815 b93fc498d15fa1aa117a03e9f6f81ba9 400 PANTHER PTHR23028 32 383 5.5E-24 T 26-04-2016 PAM18_RS28815 b93fc498d15fa1aa117a03e9f6f81ba9 400 Pfam PF01757 Acyltransferase family 38 363 7.4E-22 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 Pfam PF13683 Integrase core domain 187 252 7.2E-32 T 26-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 SUPERFAMILY SSF53098 97 260 7.21E-43 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 PANTHER PTHR24559 15 262 1.7E-120 T 26-04-2016 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 Gene3D G3DSA:3.30.420.10 96 253 2.1E-43 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 PANTHER PTHR24559:SF185 15 262 1.7E-120 T 26-04-2016 PAM18_RS18095 66b26177da499c36baa2937ac29952ba 279 Pfam PF13276 HTH-like domain 36 88 8.7E-12 T 26-04-2016 IPR025948 HTH-like domain PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 Gene3D G3DSA:3.40.50.720 267 561 1.2E-106 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 Gene3D G3DSA:3.40.50.10380 15 266 3.1E-114 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 26-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 Pfam PF03949 Malic enzyme, NAD binding domain 269 529 6.1E-104 T 26-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 SUPERFAMILY SSF53223 5 268 7.19E-107 T 26-04-2016 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 2 564 70.344 T 26-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PANTHER PTHR23406 1 564 0.0 T 26-04-2016 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 145 174 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 265 281 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 296 312 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 240 258 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 85 109 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 407 423 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PRINTS PR00072 Malic enzyme signature 181 203 2.9E-72 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 SMART SM00919 269 530 6.2E-129 T 26-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 SMART SM01274 79 259 9.1E-105 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 SUPERFAMILY SSF51735 269 561 1.0E-92 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PIRSF PIRSF000106 1 562 2.5E-220 T 26-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 3.5E-77 T 26-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PAM18_RS07685 5faad901b3a7afe63e72166f9d548a5f 564 PANTHER PTHR23406:SF25 1 564 0.0 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.2E-8 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-8 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.2E-8 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 Gene3D G3DSA:3.50.50.60 117 308 3.0E-14 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PANTHER PTHR22912 1 308 3.9E-169 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 294 1.7E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.1E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.1E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 1.1E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 Gene3D G3DSA:3.50.50.60 5 116 9.2E-24 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 PANTHER PTHR22912:SF152 1 308 3.9E-169 T 26-04-2016 PAM18_RS18645 976d000033e3d964523bfb909765eaa9 412 SUPERFAMILY SSF51905 8 316 3.69E-34 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21845 90986d4614f56772e2d5f16fa8cd3363 84 PANTHER PTHR39585 2 84 3.0E-35 T 26-04-2016 PAM18_RS21845 90986d4614f56772e2d5f16fa8cd3363 84 SUPERFAMILY SSF109910 3 79 1.83E-24 T 26-04-2016 IPR005631 Flavinator of succinate dehydrogenase PAM18_RS21845 90986d4614f56772e2d5f16fa8cd3363 84 PANTHER PTHR39585:SF1 2 84 3.0E-35 T 26-04-2016 PAM18_RS21845 90986d4614f56772e2d5f16fa8cd3363 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 5.4E-25 T 26-04-2016 IPR005631 Flavinator of succinate dehydrogenase PAM18_RS21845 90986d4614f56772e2d5f16fa8cd3363 84 Gene3D G3DSA:1.10.150.250 2 82 9.6E-29 T 26-04-2016 IPR005631 Flavinator of succinate dehydrogenase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 SUPERFAMILY SSF52540 9 644 1.73E-184 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:3.40.50.300 288 389 1.5E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:3.40.50.300 554 644 1.5E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:1.10.486.10 390 543 1.3E-49 T 26-04-2016 PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 8 726 0.0 T 26-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 PANTHER PTHR11070 8 726 3.9E-253 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 273 6.2E-74 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:3.40.50.300 193 287 3.9E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:3.40.50.300 8 112 3.9E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 PANTHER PTHR11070:SF7 8 726 3.9E-253 T 26-04-2016 PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Gene3D G3DSA:1.10.10.160 116 192 3.9E-22 T 26-04-2016 IPR013986 DExx box DNA helicase domain PAM18_RS28445 e6a7ba880c712cbcd92e9312d6b525c6 728 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 1.3E-75 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 PANTHER PTHR12553 1 256 1.1E-47 T 26-04-2016 PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 Gene3D G3DSA:3.60.15.10 1 254 3.6E-55 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 252 1.1E-113 T 26-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 PANTHER PTHR12553:SF7 1 256 1.1E-47 T 26-04-2016 PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 SUPERFAMILY SSF56281 1 255 5.66E-38 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 SMART SM00849 36 225 0.0094 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS08190 dc9e1ea841d253e37ce202fc774a2849 256 Pfam PF12706 Beta-lactamase superfamily domain 64 225 5.1E-17 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 5.4E-66 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 26-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Gene3D G3DSA:3.40.30.10 102 196 5.5E-37 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PANTHER PTHR22912:SF107 198 513 2.0E-210 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Gene3D G3DSA:3.40.30.10 1 93 2.1E-33 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 2.7E-41 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.7E-41 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 2.7E-41 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 2.7E-41 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 2.7E-41 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Gene3D G3DSA:3.50.50.60 322 509 1.5E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PIRSF PIRSF000238 1 520 3.4E-265 T 26-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 PANTHER PTHR22912 198 513 2.0E-210 T 26-04-2016 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 SUPERFAMILY SSF52833 103 196 3.21E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 SUPERFAMILY SSF51905 202 513 1.48E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 1.6E-244 T 26-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 503 2.1E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Gene3D G3DSA:3.50.50.60 211 321 5.3E-24 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 Pfam PF13192 Thioredoxin domain 124 193 1.1E-8 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00710 f77be4b7fe265da08f61f3aeab06cb94 521 SUPERFAMILY SSF52833 1 100 2.57E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 PANTHER PTHR13748 347 387 1.3E-197 T 26-04-2016 PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 PANTHER PTHR13748:SF4 2 331 1.3E-197 T 26-04-2016 PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 SUPERFAMILY SSF52540 3 310 4.78E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 PANTHER PTHR13748:SF4 347 387 1.3E-197 T 26-04-2016 PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 SMART SM00833 256 373 2.3E-46 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 PANTHER PTHR13748 2 331 1.3E-197 T 26-04-2016 PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 Gene3D G3DSA:3.40.50.300 3 229 5.1E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 4.0E-58 T 26-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 373 1.6E-29 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS28910 ad2aed48fcd0756495e435f54fd768de 400 Gene3D G3DSA:3.30.1220.10 244 373 7.5E-20 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS22650 c4b3d526e866077d356f234b94bc3c88 494 PANTHER PTHR11895:SF76 1 483 7.6E-247 T 26-04-2016 PAM18_RS22650 c4b3d526e866077d356f234b94bc3c88 494 SUPERFAMILY SSF75304 13 484 2.49E-126 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22650 c4b3d526e866077d356f234b94bc3c88 494 Gene3D G3DSA:3.90.1300.10 12 485 3.7E-123 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22650 c4b3d526e866077d356f234b94bc3c88 494 PANTHER PTHR11895 1 483 7.6E-247 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22650 c4b3d526e866077d356f234b94bc3c88 494 Pfam PF01425 Amidase 35 466 9.5E-89 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF53850 90 301 2.9E-47 T 26-04-2016 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 179 264 3.1E-10 T 26-04-2016 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 93 178 1.8E-27 T 26-04-2016 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF46785 2 112 9.41E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 PANTHER PTHR30537:SF5 1 300 7.2E-126 T 26-04-2016 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 PANTHER PTHR30537 1 300 7.2E-126 T 26-04-2016 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:1.10.10.10 2 84 1.6E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19585 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF03466 LysR substrate binding domain 91 296 5.0E-49 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.405 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 673 933 6.72E-102 T 26-04-2016 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:1.10.1030.10 400 538 7.7E-52 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 1 127 2.01E-49 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PANTHER PTHR11405 1 1072 0.0 T 26-04-2016 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 557 675 2.3E-49 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 3 108 2.1E-44 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.0E-66 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 745 934 1.1E-76 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 200 399 1.3E-75 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02142 MGS-like domain 958 1041 2.2E-19 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM00851 955 1041 2.7E-32 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 539 662 2.4E-61 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM01096 424 547 6.4E-75 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 PANTHER PTHR11405:SF5 1 1072 0.0 T 26-04-2016 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 9.9E-41 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.1490.20 142 199 1.7E-26 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.126 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 128 401 1.94E-109 T 26-04-2016 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.1490.20 687 744 3.3E-26 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-72 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.0E-32 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.1380 938 1071 8.7E-42 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF48108 396 554 6.28E-53 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 PAM18_RS24910 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52335 938 1069 1.01E-39 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 PANTHER PTHR30451 4 814 0.0 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 Pfam PF13953 PapC C-terminal domain 732 796 2.0E-18 T 26-04-2016 IPR025949 PapC-like, C-terminal domain PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 SUPERFAMILY SSF141729 5 123 6.67E-22 T 26-04-2016 PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 PANTHER PTHR30451:SF1 4 814 0.0 T 26-04-2016 PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 Pfam PF00577 Outer membrane usher protein 165 721 1.4E-155 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04360 d27d6560d2c71f0cd094403a366702bd 822 Pfam PF13954 PapC N-terminal domain 7 150 4.9E-34 T 26-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 PANTHER PTHR30006 1 352 1.5E-140 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 1 134 3.3E-26 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 275 320 3.3E-26 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 Pfam PF13343 Bacterial extracellular solute-binding protein 87 334 4.8E-51 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 SUPERFAMILY SSF53850 36 345 6.73E-52 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 PANTHER PTHR30006:SF10 1 352 1.5E-140 T 26-04-2016 PAM18_RS08830 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 139 274 5.3E-23 T 26-04-2016 PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 72 1.0E-9 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 4.8E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 1.1E-25 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 Gene3D G3DSA:1.10.1200.10 3 76 1.9E-26 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 PANTHER PTHR20863 2 75 5.9E-19 T 26-04-2016 PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 19.918 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS16255 65450b5c91bfbd90b53ff8d11b3c488f 79 SUPERFAMILY SSF47336 1 77 3.66E-20 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 390 2.2E-127 T 26-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 Gene3D G3DSA:1.10.8.260 269 319 2.6E-9 T 26-04-2016 IPR023166 HI0933 insert-like domain PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 Gene3D G3DSA:2.40.30.10 188 268 2.1E-31 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-7 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 367 1.2E-7 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.2E-7 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 SUPERFAMILY SSF160996 190 336 4.32E-40 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PANTHER PTHR10617:SF103 3 285 3.6E-131 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.3E-5 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.3E-5 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 367 3.3E-5 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 SUPERFAMILY SSF51905 335 391 4.53E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 SUPERFAMILY SSF51905 4 188 4.53E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 Pfam PF03486 HI0933-like protein 5 390 7.8E-151 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PANTHER PTHR10617 328 392 3.6E-131 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PANTHER PTHR10617 3 285 3.6E-131 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 PANTHER PTHR10617:SF103 328 392 3.6E-131 T 26-04-2016 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 Gene3D G3DSA:3.50.50.60 337 391 6.4E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02830 1db7a09c9f332b34856e1292c66b9f73 392 Gene3D G3DSA:3.50.50.60 3 186 6.4E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 Gene3D G3DSA:3.40.50.720 1 162 6.5E-72 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PIRSF PIRSF000149 1 334 4.2E-135 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PANTHER PTHR10836:SF50 1 331 5.5E-201 T 26-04-2016 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PANTHER PTHR10836 1 331 5.5E-201 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 SUPERFAMILY SSF51735 1 182 1.5E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 312 8.1E-61 T 26-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 154 3.3E-58 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 26-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 Gene3D G3DSA:3.30.360.10 163 314 1.8E-69 T 26-04-2016 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 3.3E-35 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 3.3E-35 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 3.3E-35 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.3E-35 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.3E-35 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 SUPERFAMILY SSF55347 154 313 8.33E-67 T 26-04-2016 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.9E-127 T 26-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS09110 e287b9d66555a215a607e05955e87840 334 SMART SM00846 3 154 3.3E-94 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 415 1.4E-9 T 26-04-2016 IPR032807 Tyrosine kinase, G-rich domain PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 SUPERFAMILY SSF160355 71 220 4.19E-12 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 Gene3D G3DSA:3.30.1890.10 242 254 3.0E-5 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 Gene3D G3DSA:3.30.1890.10 88 208 3.0E-5 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 Gene3D G3DSA:3.30.1890.10 308 331 3.0E-5 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 SUPERFAMILY SSF160355 221 331 1.57E-16 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 SUPERFAMILY SSF160355 364 389 1.57E-16 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 PANTHER PTHR32309 2 437 3.1E-93 T 26-04-2016 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 Pfam PF02706 Chain length determinant protein 13 72 3.8E-13 T 26-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PAM18_RS20935 58e65efc30ed7fc79fc1f71c44ffdd87 442 PANTHER PTHR32309:SF14 2 437 3.1E-93 T 26-04-2016 PAM18_RS20285 5ce1a30d745d10897cafffc27b2c1716 417 PANTHER PTHR30482 62 416 2.8E-201 T 26-04-2016 PAM18_RS20285 5ce1a30d745d10897cafffc27b2c1716 417 PANTHER PTHR30482:SF9 62 416 2.8E-201 T 26-04-2016 PAM18_RS20285 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF11862 Domain of unknown function (DUF3382) 3 105 1.3E-19 T 26-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PAM18_RS20285 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 398 1.1E-51 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 Gene3D G3DSA:3.30.1370.30 2 71 1.4E-29 T 26-04-2016 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.877 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 Pfam PF00410 Ribosomal protein S8 5 130 5.3E-50 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 PANTHER PTHR11758 1 130 3.3E-61 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 Gene3D G3DSA:3.30.1490.10 74 130 6.5E-27 T 26-04-2016 PAM18_RS03495 be05b762ee7fa34563a966f2d88fc537 130 SUPERFAMILY SSF56047 2 130 5.49E-47 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 PAM18_RS22970 7de30bdf4172bac836b8879f38732bee 307 Pfam PF01551 Peptidase family M23 202 296 6.0E-32 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS22970 7de30bdf4172bac836b8879f38732bee 307 Gene3D G3DSA:2.70.70.10 154 301 2.5E-49 T 26-04-2016 PAM18_RS22970 7de30bdf4172bac836b8879f38732bee 307 SUPERFAMILY SSF51261 94 300 3.3E-56 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS22970 7de30bdf4172bac836b8879f38732bee 307 PANTHER PTHR21666:SF214 55 307 1.3E-54 T 26-04-2016 PAM18_RS22970 7de30bdf4172bac836b8879f38732bee 307 PANTHER PTHR21666 55 307 1.3E-54 T 26-04-2016 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 Gene3D G3DSA:3.40.190.10 164 263 5.7E-33 T 26-04-2016 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 SUPERFAMILY SSF53850 95 294 2.17E-26 T 26-04-2016 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.3E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 PANTHER PTHR30537:SF16 1 294 9.5E-141 T 26-04-2016 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 Pfam PF03466 LysR substrate binding domain 95 293 6.1E-22 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 Gene3D G3DSA:1.10.10.10 2 87 8.0E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 PANTHER PTHR30537 1 294 9.5E-141 T 26-04-2016 PAM18_RS00190 943a06c56a2d0227c65cecbf119f958a 295 SUPERFAMILY SSF46785 4 87 2.72E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 SUPERFAMILY SSF54637 8 137 1.45E-41 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 PIRSF PIRSF003230 3 142 2.2E-44 T 26-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 PANTHER PTHR31793 8 138 3.1E-48 T 26-04-2016 PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Pfam PF03061 Thioesterase superfamily 24 107 3.6E-17 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 135 4.7E-48 T 26-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Gene3D G3DSA:3.10.129.10 8 139 5.2E-48 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 130 5.5E-33 T 26-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 PAM18_RS20775 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 PANTHER PTHR31793:SF9 8 138 3.1E-48 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 Gene3D G3DSA:3.40.190.10 102 180 1.3E-15 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 SUPERFAMILY SSF53850 100 293 7.06E-27 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 PANTHER PTHR30579 7 298 9.1E-134 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 Gene3D G3DSA:3.40.190.10 181 250 3.1E-6 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 PANTHER PTHR30579:SF3 7 298 9.1E-134 T 26-04-2016 PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 SUPERFAMILY SSF46785 10 122 4.08E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 Gene3D G3DSA:1.10.10.10 12 90 2.4E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 Pfam PF03466 LysR substrate binding domain 99 293 1.1E-28 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14250 9a10de022bdb5d510768ff026a601524 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 65 2.8E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 PANTHER PTHR24220 7 105 2.2E-129 T 26-04-2016 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 PANTHER PTHR24220 121 254 2.2E-129 T 26-04-2016 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 Gene3D G3DSA:3.40.50.300 2 251 8.3E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.9E-10 T 26-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 SMART SM00382 30 231 2.0E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF00005 ABC transporter 22 181 5.3E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 SUPERFAMILY SSF52540 4 253 2.24E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 PANTHER PTHR24220:SF358 7 105 2.2E-129 T 26-04-2016 PAM18_RS20290 c9fd75a3d4673a2c884c3a9599a111c6 255 PANTHER PTHR24220:SF358 121 254 2.2E-129 T 26-04-2016 PAM18_RS18125 a6b57f432b4a69438810daecea28b443 280 PANTHER PTHR30273:SF2 3 277 3.9E-80 T 26-04-2016 PAM18_RS18125 a6b57f432b4a69438810daecea28b443 280 Pfam PF16344 Domain of unknown function (DUF4974) 173 267 6.9E-8 T 26-04-2016 IPR032508 Protein FecR, C-terminal PAM18_RS18125 a6b57f432b4a69438810daecea28b443 280 PANTHER PTHR30273 3 277 3.9E-80 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS18125 a6b57f432b4a69438810daecea28b443 280 PIRSF PIRSF018266 6 277 1.4E-74 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS18125 a6b57f432b4a69438810daecea28b443 280 Pfam PF04773 FecR protein 68 160 1.0E-19 T 26-04-2016 IPR006860 FecR protein PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 Gene3D G3DSA:3.40.640.10 38 252 2.6E-61 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 PANTHER PTHR11751:SF398 3 347 2.3E-125 T 26-04-2016 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 Pfam PF00155 Aminotransferase class I and II 26 347 7.5E-54 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 26-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 Gene3D G3DSA:3.90.1150.10 253 348 2.7E-26 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 1.6E-92 T 26-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 SUPERFAMILY SSF53383 5 347 1.99E-75 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.17 T 26-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 PAM18_RS23185 a0adfe82a2668566a638cf4f59a88e54 351 PANTHER PTHR11751 3 347 2.3E-125 T 26-04-2016 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 PANTHER PTHR11699 1 484 3.6E-274 T 26-04-2016 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 Pfam PF00171 Aldehyde dehydrogenase family 13 472 1.4E-174 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 Gene3D G3DSA:3.40.309.10 256 447 2.1E-71 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2 485 1.0E-223 T 26-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 Gene3D G3DSA:3.40.605.10 2 255 4.6E-100 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 PANTHER PTHR11699:SF213 1 484 3.6E-274 T 26-04-2016 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 SUPERFAMILY SSF53720 2 478 6.54E-171 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS04155 b95ea3745870ce83281eeffb96ae3b6f 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 PANTHER PTHR39583 1 237 4.0E-65 T 26-04-2016 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 Pfam PF11612 Type II secretion system (T2SS), protein J 57 197 4.3E-44 T 26-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 2.8E-11 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 SUPERFAMILY SSF54523 39 204 1.31E-45 T 26-04-2016 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.1E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 PANTHER PTHR39583:SF1 1 237 4.0E-65 T 26-04-2016 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 Gene3D G3DSA:3.10.610.10 37 143 1.1E-34 T 26-04-2016 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 SUPERFAMILY SSF54523 7 46 2.98E-5 T 26-04-2016 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 199 1.7E-91 T 26-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 PAM18_RS09575 a75066e645e610733a9b2aacaa40b99a 237 Gene3D G3DSA:2.10.70.20 145 199 6.7E-9 T 26-04-2016 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 Gene3D G3DSA:1.10.10.60 292 342 5.0E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 SMART SM00342 256 338 9.3E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 6.0E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 6.0E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 Pfam PF12833 Helix-turn-helix domain 262 339 3.3E-14 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 PANTHER PTHR11019 145 345 1.8E-43 T 26-04-2016 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 PANTHER PTHR11019:SF52 145 345 1.8E-43 T 26-04-2016 PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 210 8.2E-48 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS09610 0aba8e9ea08d8cf400fead07755f2c48 345 SUPERFAMILY SSF46689 292 341 4.93E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Gene3D G3DSA:3.30.470.20 209 332 5.3E-48 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Gene3D G3DSA:3.30.470.20 123 140 5.3E-48 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Gene3D G3DSA:3.40.50.20 4 122 5.3E-26 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 PANTHER PTHR23132 5 337 1.1E-92 T 26-04-2016 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 331 5.2E-88 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 100 111 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Pfam PF01820 D-ala D-ala ligase N-terminus 7 123 1.7E-21 T 26-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 335 35.434 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 PIRSF PIRSF039102 3 343 3.6E-98 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Gene3D G3DSA:3.30.1490.20 143 208 7.7E-20 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 SUPERFAMILY SSF52440 5 132 1.92E-26 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 Pfam PF07478 D-ala D-ala ligase C-terminus 146 330 3.2E-51 T 26-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 SUPERFAMILY SSF56059 133 334 2.65E-54 T 26-04-2016 PAM18_RS03765 8721734bd54c382fe09a4ddf9a34f218 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 277 305 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 196 291 4.05E-16 T 26-04-2016 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 154 286 1.1E-11 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 13 141 1.1E-15 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 PANTHER PTHR32322 1 292 1.4E-180 T 26-04-2016 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 PANTHER PTHR32322:SF11 1 292 1.4E-180 T 26-04-2016 PAM18_RS08260 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 41 145 5.49E-15 T 26-04-2016 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 1.2E-8 T 26-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF00005 ABC transporter 21 211 6.8E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 PANTHER PTHR24220:SF358 102 288 1.0E-115 T 26-04-2016 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 PANTHER PTHR24220:SF358 7 75 1.0E-115 T 26-04-2016 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 Gene3D G3DSA:3.40.50.300 2 282 7.2E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 SUPERFAMILY SSF52540 4 66 5.65E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 SUPERFAMILY SSF52540 99 283 5.65E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 SMART SM00382 30 261 8.5E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 PANTHER PTHR24220 102 288 1.0E-115 T 26-04-2016 PAM18_RS25695 5a148be6e30b256d65ebbb73ad16adce 290 PANTHER PTHR24220 7 75 1.0E-115 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 SUPERFAMILY SSF53686 6 321 7.2E-93 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 PANTHER PTHR10314 3 363 1.4E-138 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 SUPERFAMILY SSF54631 334 453 9.1E-18 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 PANTHER PTHR10314:SF35 3 363 1.4E-138 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Gene3D G3DSA:3.10.580.10 338 454 2.3E-19 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Gene3D G3DSA:3.40.50.1100 44 148 6.2E-37 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 26-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Gene3D G3DSA:3.40.50.1100 154 321 4.8E-61 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Gene3D G3DSA:3.40.50.1100 7 43 4.8E-61 T 26-04-2016 PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 SMART SM00116 344 391 1.3E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 2.6E-65 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Pfam PF00571 CBS domain 344 387 1.2E-9 T 26-04-2016 IPR000644 CBS domain PAM18_RS02020 e4fabb4383ec545b279ca50ed09005c4 457 Pfam PF00571 CBS domain 401 452 0.0076 T 26-04-2016 IPR000644 CBS domain PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 Gene3D G3DSA:3.50.50.60 20 121 5.5E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 Gene3D G3DSA:3.50.50.60 178 254 5.5E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 Gene3D G3DSA:3.50.50.60 357 401 5.5E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 Pfam PF01266 FAD dependent oxidoreductase 31 392 6.6E-48 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 PANTHER PTHR13847:SF199 1 460 1.2E-207 T 26-04-2016 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 SUPERFAMILY SSF51905 182 307 1.6E-41 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 SUPERFAMILY SSF51905 3 124 1.6E-41 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07920 686132a2d4f642599bf3406e19226620 468 PANTHER PTHR13847 1 460 1.2E-207 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 PANTHER PTHR24422:SF12 2 431 4.9E-227 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Gene3D G3DSA:3.30.450.20 152 251 1.1E-19 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Gene3D G3DSA:3.30.450.20 30 132 1.2E-23 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Pfam PF13426 PAS domain 154 253 3.1E-13 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SMART SM00091 139 207 0.0051 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SMART SM00091 17 87 2.7 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SUPERFAMILY SSF55785 152 252 5.76E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SUPERFAMILY SSF58104 248 428 2.49E-49 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 9.7E-25 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 9.7E-25 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 9.7E-25 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Gene3D G3DSA:1.10.287.950 252 427 1.0E-41 T 26-04-2016 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 260 3.2E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 134 1.9E-15 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 428 7.0E-35 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SMART SM00086 212 254 0.065 T 26-04-2016 IPR001610 PAC motif PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SMART SM00086 92 134 2.3E-4 T 26-04-2016 IPR001610 PAC motif PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SUPERFAMILY SSF55785 30 132 4.89E-24 T 26-04-2016 IPR000014 PAS domain PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 Pfam PF08448 PAS fold 29 134 7.1E-13 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 SMART SM00283 226 431 1.3E-15 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS15940 23ae531d27e2a57abe906a14afb1f6a9 431 PANTHER PTHR24422 2 431 4.9E-227 T 26-04-2016 PAM18_RS08340 f0b2f82aa8e75c845e4cfd5d5661989b 338 Pfam PF10974 Protein of unknown function (DUF2804) 8 337 2.0E-81 T 26-04-2016 IPR021243 Protein of unknown function DUF2804 PAM18_RS08340 f0b2f82aa8e75c845e4cfd5d5661989b 338 PANTHER PTHR35868:SF2 1 338 1.4E-183 T 26-04-2016 PAM18_RS08340 f0b2f82aa8e75c845e4cfd5d5661989b 338 PANTHER PTHR35868 1 338 1.4E-183 T 26-04-2016 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 PANTHER PTHR35008:SF3 1 434 0.0 T 26-04-2016 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 SUPERFAMILY SSF46626 435 539 1.37E-23 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Gene3D G3DSA:1.10.760.10 311 422 2.3E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Gene3D G3DSA:1.10.760.10 564 668 6.1E-13 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 SUPERFAMILY SSF46626 24 156 2.52E-22 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 SUPERFAMILY SSF46626 311 416 4.5E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Gene3D G3DSA:1.10.760.10 178 285 1.4E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Gene3D G3DSA:1.10.760.10 30 132 6.2E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Gene3D G3DSA:1.10.760.10 448 536 1.5E-23 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 311 392 9.6E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 561 648 1.7E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 SUPERFAMILY SSF46626 180 290 2.4E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 SUPERFAMILY SSF46626 552 659 6.35E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 Pfam PF00034 Cytochrome c 34 132 2.4E-4 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23835 5ccfec1f5b9c7fdcb7aeb15b5cde5ad5 675 PANTHER PTHR35008 1 434 0.0 T 26-04-2016 PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 421 5.1E-47 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Gene3D G3DSA:3.30.70.270 265 431 4.6E-63 T 26-04-2016 PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 SUPERFAMILY SSF55073 268 425 3.37E-54 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 PANTHER PTHR10799 144 533 1.5E-92 T 26-04-2016 PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 SUPERFAMILY SSF141868 439 682 8.76E-90 T 26-04-2016 IPR001633 EAL domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Gene3D G3DSA:3.20.20.450 436 682 1.4E-97 T 26-04-2016 IPR001633 EAL domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 SMART SM00052 433 679 1.7E-121 T 26-04-2016 IPR001633 EAL domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF00563 EAL domain 440 674 8.2E-73 T 26-04-2016 IPR001633 EAL domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 SMART SM00267 252 423 7.3E-68 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 171 1.5E-15 T 26-04-2016 IPR005330 MHYT domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 109 2.3E-21 T 26-04-2016 IPR005330 MHYT domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 245 7.4E-15 T 26-04-2016 IPR005330 MHYT domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.6E-51 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS17020 53d2cd58ec644b056fff198b71156bbc 685 PANTHER PTHR10799:SF774 144 533 1.5E-92 T 26-04-2016 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 377 386 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 165 181 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 182 197 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 119 130 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 327 354 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 386 397 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 310 321 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PRINTS PR00359 B-class P450 signature 355 370 6.1E-38 T 26-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PANTHER PTHR11712:SF233 1 436 1.3E-276 T 26-04-2016 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 SUPERFAMILY SSF48264 32 434 3.41E-73 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 Gene3D G3DSA:1.10.630.10 30 434 2.9E-98 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 Pfam PF00067 Cytochrome P450 309 406 5.0E-14 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS13205 9c7ff4062f7f39afff5c142dd36b279f 444 PANTHER PTHR11712 1 436 1.3E-276 T 26-04-2016 PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 PANTHER PTHR11260 2 204 1.2E-63 T 26-04-2016 PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 PANTHER PTHR11260:SF285 2 204 1.2E-63 T 26-04-2016 PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 80 5.6E-21 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 Gene3D G3DSA:1.20.1050.10 95 211 4.1E-14 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 SUPERFAMILY SSF47616 72 207 2.37E-17 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 SUPERFAMILY SSF52833 5 104 6.16E-24 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS02395 5a237574fe8b2a935339cbf3c1f103cc 249 Gene3D G3DSA:3.40.30.10 5 94 5.2E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 PANTHER PTHR32507:SF12 320 454 1.8E-210 T 26-04-2016 PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 PANTHER PTHR32507:SF12 1 275 1.8E-210 T 26-04-2016 PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 Pfam PF00999 Sodium/hydrogen exchanger family 11 276 2.2E-26 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 Pfam PF00999 Sodium/hydrogen exchanger family 338 442 1.3E-6 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 PANTHER PTHR32507 320 454 1.8E-210 T 26-04-2016 PAM18_RS14915 9f4d83689bd83f2c43ff2e66eb68188d 454 PANTHER PTHR32507 1 275 1.8E-210 T 26-04-2016 PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 Pfam PF00563 EAL domain 146 379 3.2E-63 T 26-04-2016 IPR001633 EAL domain PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 PANTHER PTHR33121:SF13 116 388 3.3E-58 T 26-04-2016 PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 SUPERFAMILY SSF141868 146 389 1.03E-72 T 26-04-2016 IPR001633 EAL domain PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 SMART SM00052 139 384 2.7E-70 T 26-04-2016 IPR001633 EAL domain PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 Gene3D G3DSA:3.40.50.2300 2 133 7.3E-18 T 26-04-2016 PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 PANTHER PTHR33121 116 388 3.3E-58 T 26-04-2016 PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 SUPERFAMILY SSF52172 1 182 6.55E-21 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 SMART SM00448 4 122 1.2E-9 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 Gene3D G3DSA:3.20.20.450 149 389 1.0E-73 T 26-04-2016 IPR001633 EAL domain PAM18_RS05045 4be8e675748b694d7dc4eaf2266c5d73 392 Pfam PF00072 Response regulator receiver domain 6 120 3.9E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 SUPERFAMILY SSF50685 103 197 3.42E-12 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 Pfam PF05036 Sporulation related domain 265 334 5.4E-11 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 Gene3D G3DSA:3.30.70.1070 266 333 5.2E-10 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 Pfam PF03330 Lytic transglycolase 101 189 4.9E-26 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 102 193 1.3E-43 T 26-04-2016 IPR012997 Rare lipoprotein A PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 PANTHER PTHR34183:SF1 3 342 3.4E-166 T 26-04-2016 PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 SUPERFAMILY SSF110997 265 337 3.79E-11 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 Gene3D G3DSA:2.40.40.10 138 189 2.7E-4 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS04780 493d977bd3ea38d364fa1fda440cd74c 342 PANTHER PTHR34183 3 342 3.4E-166 T 26-04-2016 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 Gene3D G3DSA:1.10.10.60 195 251 4.1E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 Pfam PF12833 Helix-turn-helix domain 220 299 1.1E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 SUPERFAMILY SSF46689 250 299 2.27E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 5.5E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 5.5E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 Gene3D G3DSA:1.10.10.60 252 299 2.4E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 Pfam PF12852 Cupin 2 182 3.8E-31 T 26-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 SUPERFAMILY SSF46689 197 247 8.98E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 SMART SM00342 214 297 4.4E-27 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PANTHER PTHR11019:SF77 25 152 1.9E-51 T 26-04-2016 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PANTHER PTHR11019:SF77 181 303 1.9E-51 T 26-04-2016 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PANTHER PTHR11019 25 152 1.9E-51 T 26-04-2016 PAM18_RS05955 9e43934a94d54c4a3f4077d936ab12ff 304 PANTHER PTHR11019 181 303 1.9E-51 T 26-04-2016 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 268 291 7.37E-75 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 398 419 7.37E-75 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 27 53 7.37E-75 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 350 375 7.37E-75 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 83 110 7.37E-75 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF52029 184 376 2.62E-83 T 26-04-2016 IPR027409 GroEL-like apical domain PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF48592 406 521 4.28E-75 T 26-04-2016 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF48592 7 134 4.28E-75 T 26-04-2016 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.5E-254 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:1.10.560.10 367 518 1.4E-40 T 26-04-2016 IPR027413 GroEL-like equatorial domain PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.8E-94 T 26-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 26-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.624 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 PANTHER PTHR11353 2 547 4.4E-253 T 26-04-2016 PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:1.10.560.10 3 188 1.5E-46 T 26-04-2016 IPR027413 GroEL-like equatorial domain PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:3.50.7.10 189 366 4.7E-99 T 26-04-2016 IPR027409 GroEL-like apical domain PAM18_RS22875 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF54849 137 203 3.43E-24 T 26-04-2016 PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 Gene3D G3DSA:3.40.50.1820 281 523 1.6E-67 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 Gene3D G3DSA:2.60.40.10 139 260 1.7E-20 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 PANTHER PTHR10907:SF55 191 480 1.9E-58 T 26-04-2016 PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 SUPERFAMILY SSF53474 282 522 3.67E-46 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 SUPERFAMILY SSF81296 146 277 1.08E-18 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 Pfam PF00756 Putative esterase 300 520 9.5E-34 T 26-04-2016 IPR000801 Putative esterase PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 PANTHER PTHR10907 191 480 1.9E-58 T 26-04-2016 PAM18_RS13295 a4c84126a69eae34e21c1e6dcbbd64ba 526 Pfam PF11806 Domain of unknown function (DUF3327) 171 281 1.2E-18 T 26-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 Gene3D G3DSA:3.20.20.60 9 269 1.3E-101 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.55 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 PANTHER PTHR20881 2 273 4.9E-132 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 2.0E-99 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 SUPERFAMILY SSF51621 10 269 3.51E-94 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 9.8E-93 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS17675 42de58b804f01ef02b766a2ccf32a7d3 273 PIRSF PIRSF000388 1 272 1.9E-99 T 26-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS20315 74db2616a135e90083102c8074911692 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 173 2.6E-13 T 26-04-2016 PAM18_RS20315 74db2616a135e90083102c8074911692 199 SUPERFAMILY SSF51735 2 197 5.54E-24 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20315 74db2616a135e90083102c8074911692 199 Gene3D G3DSA:3.40.50.720 1 197 9.2E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20315 74db2616a135e90083102c8074911692 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 2.5E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20315 74db2616a135e90083102c8074911692 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 2.5E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20315 74db2616a135e90083102c8074911692 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.5E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS20315 74db2616a135e90083102c8074911692 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.706 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 9.2E-56 T 26-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 Pfam PF00411 Ribosomal protein S11 19 128 2.2E-51 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 PIRSF PIRSF002131 1 129 1.4E-53 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 Gene3D G3DSA:3.30.420.80 9 129 6.1E-54 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 SUPERFAMILY SSF53137 15 129 2.09E-47 T 26-04-2016 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 PANTHER PTHR11759 11 129 6.9E-72 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03540 6612f1505ad78f0c94ed2173877365bd 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 26-04-2016 IPR018102 Ribosomal S11, conserved site PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 PANTHER PTHR10072 11 116 4.6E-48 T 26-04-2016 PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 8.0E-38 T 26-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.764 T 26-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 Gene3D G3DSA:2.60.300.12 8 102 3.6E-33 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 5.6E-19 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 SUPERFAMILY SSF89360 5 102 1.22E-31 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS03275 89a293d9c9240aa1227f6e9246fb2872 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 26-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 PANTHER PTHR10909:SF300 1 389 5.0E-245 T 26-04-2016 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 SUPERFAMILY SSF47203 237 410 9.99E-23 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 21 411 1.3E-198 T 26-04-2016 IPR023922 Sulphate-starvation-induced SfnB PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 386 4.0E-22 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 PANTHER PTHR10909 1 389 5.0E-245 T 26-04-2016 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Gene3D G3DSA:1.10.540.10 13 127 9.3E-33 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 SUPERFAMILY SSF56645 33 235 2.88E-48 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Gene3D G3DSA:1.20.140.10 229 408 1.1E-57 T 26-04-2016 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Gene3D G3DSA:2.40.110.10 148 228 2.9E-22 T 26-04-2016 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 PIRSF PIRSF016578 14 406 2.1E-36 T 26-04-2016 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 126 1.0E-9 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13965 6f8db60b2176daa00020d65e058551a5 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 227 1.8E-9 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 273 299 1.4E-23 T 26-04-2016 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 93 176 1.4E-23 T 26-04-2016 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 9.9E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 9.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 9.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 9.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF53850 93 294 4.52E-37 T 26-04-2016 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 182 267 2.3E-25 T 26-04-2016 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF46785 7 89 6.19E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Pfam PF03466 LysR substrate binding domain 101 293 4.3E-21 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 PANTHER PTHR30118 1 294 1.2E-121 T 26-04-2016 PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:1.10.10.10 2 89 5.0E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13125 1905d5de590325036619e50d6e5b8eee 304 PANTHER PTHR30118:SF8 1 294 1.2E-121 T 26-04-2016 PAM18_RS11455 001da8f2abef90709413d4dfbcfaddc5 287 SUPERFAMILY SSF53474 7 277 1.15E-48 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11455 001da8f2abef90709413d4dfbcfaddc5 287 Gene3D G3DSA:3.40.50.1820 8 277 6.7E-47 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11455 001da8f2abef90709413d4dfbcfaddc5 287 PANTHER PTHR10992 9 276 8.9E-76 T 26-04-2016 PAM18_RS11455 001da8f2abef90709413d4dfbcfaddc5 287 Pfam PF12697 Alpha/beta hydrolase family 26 267 1.8E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS11455 001da8f2abef90709413d4dfbcfaddc5 287 PANTHER PTHR10992:SF698 9 276 8.9E-76 T 26-04-2016 PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 Pfam PF01136 Peptidase family U32 80 337 1.3E-97 T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 PANTHER PTHR30217 241 463 1.2E-256 T 26-04-2016 PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 PANTHER PTHR30217 1 210 1.2E-256 T 26-04-2016 PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 Pfam PF16325 Peptidase family U32 C-terminal domain 354 435 7.1E-20 T 26-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 PANTHER PTHR30217:SF6 241 463 1.2E-256 T 26-04-2016 PAM18_RS28425 3a1b5a61075e76d019801ea1552f09aa 464 PANTHER PTHR30217:SF6 1 210 1.2E-256 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PIRSF PIRSF019574 5 347 1.8E-108 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 Gene3D G3DSA:3.40.190.10 23 129 4.3E-53 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 Gene3D G3DSA:3.40.190.10 270 314 4.3E-53 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PANTHER PTHR30222 9 347 2.1E-234 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 5.4E-46 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 PANTHER PTHR30222:SF9 9 347 2.1E-234 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 Gene3D G3DSA:3.40.190.10 132 269 5.8E-13 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 SUPERFAMILY SSF53850 24 346 7.25E-82 T 26-04-2016 PAM18_RS01620 274b4410c7089ad2e6ce5d874fdb1085 347 Pfam PF13416 Bacterial extracellular solute-binding protein 41 301 1.7E-28 T 26-04-2016 PAM18_RS11705 30b8d81d0b1675adccc1466fc1e0c2a3 367 Pfam PF07759 Protein of unknown function (DUF1615) 49 363 1.2E-147 T 26-04-2016 IPR011673 Protein of unknown function DUF1615 PAM18_RS11705 30b8d81d0b1675adccc1466fc1e0c2a3 367 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 14 363 0.0 T 26-04-2016 IPR011673 Protein of unknown function DUF1615 PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 SUPERFAMILY SSF47240 56 388 5.73E-98 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 Pfam PF00268 Ribonucleotide reductase, small chain 95 382 1.8E-83 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 PANTHER PTHR23409 18 410 9.5E-202 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 PIRSF PIRSF000355 64 415 4.0E-142 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 PANTHER PTHR23409:SF18 18 410 9.5E-202 T 26-04-2016 PAM18_RS19815 cfe5084716fe77040069c0b90e114ec7 415 Gene3D G3DSA:1.10.620.20 79 386 8.6E-110 T 26-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 PAM18_RS13460 5da7dd298afc17a8598ab995ae71d532 327 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 10 315 8.2E-100 T 26-04-2016 IPR013398 CRISPR-associated protein Csy2 PAM18_RS13460 5da7dd298afc17a8598ab995ae71d532 327 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 9 315 6.9E-90 T 26-04-2016 IPR013398 CRISPR-associated protein Csy2 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-17 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.6E-37 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.6E-37 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.6E-37 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.179 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 26-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.7E-38 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-39 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 Gene3D G3DSA:2.40.50.100 20 83 4.0E-30 T 26-04-2016 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 SUPERFAMILY SSF110324 2 80 2.13E-33 T 26-04-2016 PAM18_RS23815 22408758d4a7dc69c3799fc8677dd1fa 85 PANTHER PTHR15893 1 85 7.6E-50 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SUPERFAMILY SSF158472 172 225 3.14E-7 T 26-04-2016 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 3.3E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 3.3E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.3E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 3.3E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 Pfam PF00672 HAMP domain 154 222 1.6E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 290 4.3E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SMART SM00388 227 291 9.6E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SMART SM00387 332 441 5.8E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SMART SM00304 171 226 6.1E-7 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 Gene3D G3DSA:3.30.565.10 296 442 3.9E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SUPERFAMILY SSF47384 210 290 1.43E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PANTHER PTHR24423 73 110 7.4E-69 T 26-04-2016 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PANTHER PTHR24423 165 445 7.4E-69 T 26-04-2016 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 440 9.8E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PANTHER PTHR24423:SF477 73 110 7.4E-69 T 26-04-2016 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 PANTHER PTHR24423:SF477 165 445 7.4E-69 T 26-04-2016 PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 SUPERFAMILY SSF55874 281 439 6.42E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09050 82195e2cc3d87c518f7a31a447b72f76 445 Gene3D G3DSA:1.10.287.130 218 287 1.1E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 SUPERFAMILY SSF56300 16 267 8.73E-56 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 Gene3D G3DSA:3.60.21.10 16 252 1.6E-32 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 PANTHER PTHR12905:SF7 6 34 3.2E-102 T 26-04-2016 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 PANTHER PTHR12905:SF7 50 272 3.2E-102 T 26-04-2016 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 Pfam PF00149 Calcineurin-like phosphoesterase 17 203 5.7E-13 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 PANTHER PTHR12905 6 34 3.2E-102 T 26-04-2016 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 PANTHER PTHR12905 50 272 3.2E-102 T 26-04-2016 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 258 41.722 T 26-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 PAM18_RS26000 882fb4ef3c9c63b22aef9f79779075d4 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 8.0E-26 T 26-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 SUPERFAMILY SSF53901 3 270 4.32E-93 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 PANTHER PTHR18919:SF95 1 393 1.3E-239 T 26-04-2016 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 PANTHER PTHR18919 1 393 1.3E-239 T 26-04-2016 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 3.9E-51 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 PIRSF PIRSF000429 1 392 1.0E-132 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 194 276 6.5E-81 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 3 123 6.5E-81 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 SUPERFAMILY SSF53901 272 390 1.09E-43 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.1E-106 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 142 193 5.4E-69 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 Gene3D G3DSA:3.40.47.10 277 390 5.4E-69 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.1E-149 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS15605 6a13506ba4814dd2698b1d7a7bc713a8 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 SUPERFAMILY SSF56935 134 883 1.34E-100 T 26-04-2016 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 Gene3D G3DSA:2.170.130.10 149 269 1.8E-33 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 PANTHER PTHR30069 12 883 0.0 T 26-04-2016 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 Pfam PF00593 TonB dependent receptor 569 882 2.2E-30 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 Pfam PF07660 Secretin and TonB N terminus short domain 67 115 1.5E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 Gene3D G3DSA:2.40.170.20 270 883 1.7E-87 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 SMART SM00965 65 116 2.4E-12 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 267 3.7E-23 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15155 6150ff220dd90c9e2af952ff059f4344 883 PANTHER PTHR30069:SF4 12 883 0.0 T 26-04-2016 PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 219 1.7E-9 T 26-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 Gene3D G3DSA:3.40.50.720 10 136 1.4E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 Gene3D G3DSA:3.30.360.10 137 345 1.2E-30 T 26-04-2016 PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 SUPERFAMILY SSF51735 10 205 3.37E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 PANTHER PTHR22604 10 359 1.2E-130 T 26-04-2016 PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 124 5.6E-22 T 26-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PAM18_RS26920 b1f5457b8b575b564c1ce89ec8406075 360 PANTHER PTHR22604:SF53 10 359 1.2E-130 T 26-04-2016 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 26-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 SUPERFAMILY SSF54919 1 140 6.29E-59 T 26-04-2016 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 Gene3D G3DSA:3.30.70.141 2 140 2.3E-61 T 26-04-2016 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.8E-41 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.8E-41 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.8E-41 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.8E-41 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.8E-41 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 SMART SM00562 3 140 1.8E-91 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.436 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 PANTHER PTHR11349 1 140 2.4E-74 T 26-04-2016 PAM18_RS05740 1a9506468d2b48dad3c71056d6f65686 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.1E-58 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS14655 dc5c903f6ea90ead31337d75cb046a28 94 Pfam PF09834 Predicted membrane protein (DUF2061) 19 70 1.4E-23 T 26-04-2016 IPR018638 Domain of unknown function DUF2061, membrane PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 PANTHER PTHR11851:SF140 71 467 2.4E-56 T 26-04-2016 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 Gene3D G3DSA:3.30.830.10 64 278 4.2E-40 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 SUPERFAMILY SSF63411 290 473 5.67E-44 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 Pfam PF05193 Peptidase M16 inactive domain 230 405 8.8E-31 T 26-04-2016 IPR007863 Peptidase M16, C-terminal PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 SUPERFAMILY SSF63411 62 267 7.0E-42 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 PANTHER PTHR11851 71 467 2.4E-56 T 26-04-2016 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 Gene3D G3DSA:3.30.830.10 296 471 1.0E-28 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS01875 d1b0b20db60c040f155cfea547bed9b3 495 Pfam PF00675 Insulinase (Peptidase family M16) 80 206 3.6E-5 T 26-04-2016 IPR011765 Peptidase M16, N-terminal PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SUPERFAMILY SSF52172 807 929 2.85E-35 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF07696 7TMR-DISM extracellular 2 49 170 1.5E-21 T 26-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SUPERFAMILY SSF52172 656 782 4.27E-27 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Gene3D G3DSA:3.30.565.10 480 645 5.9E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 5.7E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 5.7E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 5.7E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SMART SM00388 414 479 1.9E-23 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF00072 Response regulator receiver domain 810 924 4.0E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF00072 Response regulator receiver domain 661 776 6.0E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Gene3D G3DSA:3.40.50.2300 656 781 1.4E-26 T 26-04-2016 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SUPERFAMILY SSF47384 409 480 1.18E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 479 1.1E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Gene3D G3DSA:3.40.50.2300 806 935 2.3E-40 T 26-04-2016 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF07695 7TM diverse intracellular signalling 189 388 1.4E-22 T 26-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 640 2.4E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SMART SM00448 658 777 6.2E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SMART SM00448 808 924 9.9E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PANTHER PTHR24423 807 936 2.8E-112 T 26-04-2016 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PANTHER PTHR24423 2 13 2.8E-112 T 26-04-2016 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 PANTHER PTHR24423 389 654 2.8E-112 T 26-04-2016 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 Gene3D G3DSA:1.10.287.130 411 475 1.3E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SMART SM00387 526 641 2.3E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25425 f414d7faf3da7edd6cd7fb304d980bd7 942 SUPERFAMILY SSF55874 468 640 8.51E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PANTHER PTHR30386 15 374 1.2E-120 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 SUPERFAMILY SSF111369 189 296 1.44E-10 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 SUPERFAMILY SSF111369 63 137 9.15E-9 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 Gene3D G3DSA:2.40.50.100 65 97 1.1E-18 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 Gene3D G3DSA:2.40.50.100 242 275 1.1E-18 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 1.7E-10 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 288 312 1.7E-10 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 1.7E-10 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 1.7E-10 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 Pfam PF13533 Biotin-lipoyl like 65 109 7.2E-11 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 PANTHER PTHR30386:SF0 15 374 1.2E-120 T 26-04-2016 PAM18_RS19405 92ea363137d50e4b2ed9017f5d34dd35 383 Pfam PF13437 HlyD family secretion protein 245 363 7.0E-13 T 26-04-2016 PAM18_RS20200 2e80b52abd07e1bb525b78f411a09344 74 Gene3D G3DSA:1.10.1200.10 9 71 2.0E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS20200 2e80b52abd07e1bb525b78f411a09344 74 SUPERFAMILY SSF47336 8 72 7.59E-10 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS20200 2e80b52abd07e1bb525b78f411a09344 74 Pfam PF00550 Phosphopantetheine attachment site 20 72 2.2E-5 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 Gene3D G3DSA:1.10.10.10 106 168 6.1E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 PANTHER PTHR30173:SF9 14 172 8.3E-29 T 26-04-2016 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 SUPERFAMILY SSF88946 14 92 1.41E-6 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 Gene3D G3DSA:1.10.1740.10 14 80 1.6E-6 T 26-04-2016 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 167 2.6E-20 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 SUPERFAMILY SSF88659 105 168 3.27E-14 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 Pfam PF08281 Sigma-70, region 4 111 163 8.6E-15 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18130 eb50b0ef968b28f188f1cdf24c9071e2 174 PANTHER PTHR30173 14 172 8.3E-29 T 26-04-2016 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 SUPERFAMILY SSF53335 21 244 1.24E-33 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 Gene3D G3DSA:3.40.50.150 20 244 4.0E-54 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 PIRSF PIRSF006325 1 246 1.4E-114 T 26-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 246 40.503 T 26-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 Pfam PF13649 Methyltransferase domain 62 162 9.8E-12 T 26-04-2016 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 245 1.6E-86 T 26-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 PANTHER PTHR10108 5 245 9.6E-97 T 26-04-2016 PAM18_RS21765 2f4f87cf75764b3d6fa58b10c86d21e0 246 PANTHER PTHR10108:SF809 5 245 9.6E-97 T 26-04-2016 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 108 1.3E-27 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 109 18.915 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 23 109 2.2E-32 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 PANTHER PTHR34653 10 109 1.1E-26 T 26-04-2016 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 8.2E-20 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 8.2E-20 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS20090 5a5de6416a21d8520298d09170db0fed 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 8.2E-20 T 26-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 PANTHER PTHR30006 19 327 2.0E-161 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 Pfam PF13343 Bacterial extracellular solute-binding protein 72 297 1.3E-21 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 Gene3D G3DSA:3.40.190.10 124 263 5.2E-51 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 Gene3D G3DSA:3.40.190.10 264 301 5.5E-30 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 Gene3D G3DSA:3.40.190.10 5 120 5.5E-30 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 PIRSF PIRSF002825 1 332 2.1E-107 T 26-04-2016 IPR026045 Ferric binding protein PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 SUPERFAMILY SSF53850 24 328 2.08E-79 T 26-04-2016 PAM18_RS27275 11793dfb0708e8b1f29f9316c906e2c0 332 PANTHER PTHR30006:SF4 19 327 2.0E-161 T 26-04-2016 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 Pfam PF03466 LysR substrate binding domain 88 292 3.1E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 Gene3D G3DSA:1.10.10.10 3 88 1.6E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 SUPERFAMILY SSF46785 3 87 6.99E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 PANTHER PTHR30537 1 300 8.2E-164 T 26-04-2016 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 PANTHER PTHR30537:SF10 1 300 8.2E-164 T 26-04-2016 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 Gene3D G3DSA:3.40.190.10 178 259 6.2E-20 T 26-04-2016 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 Gene3D G3DSA:3.40.190.10 92 177 1.4E-20 T 26-04-2016 PAM18_RS20310 aee0ad4f35713bee653979cb00b9ae21 304 SUPERFAMILY SSF53850 91 295 1.03E-39 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 PANTHER PTHR24095 16 546 1.7E-262 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Gene3D G3DSA:3.40.50.980 33 147 1.6E-26 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Gene3D G3DSA:3.40.50.980 182 206 1.6E-26 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 PANTHER PTHR24095:SF123 16 546 1.7E-262 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Pfam PF00501 AMP-binding enzyme 42 445 3.7E-84 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Gene3D G3DSA:3.40.50.980 207 356 4.4E-39 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Gene3D G3DSA:3.30.300.30 440 538 1.4E-26 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 SUPERFAMILY SSF56801 21 541 8.11E-134 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Gene3D G3DSA:2.30.38.10 364 438 2.3E-24 T 26-04-2016 PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS03630 b8d772e3226bfda6386114fc98775263 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 1.6E-15 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 559 2.0E-108 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PANTHER PTHR11686:SF9 4 571 1.7E-177 T 26-04-2016 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 Pfam PF01019 Gamma-glutamyltranspeptidase 54 561 8.4E-159 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PANTHER PTHR11686 4 571 1.7E-177 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 3.5E-58 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS01820 76d892040f61609f57d51577df0157f3 577 SUPERFAMILY SSF56235 34 563 9.07E-148 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 Gene3D G3DSA:3.40.50.300 16 199 4.1E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 Pfam PF01926 50S ribosome-binding GTPase 17 131 1.8E-23 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 PANTHER PTHR11649:SF3 5 304 6.1E-120 T 26-04-2016 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 PANTHER PTHR11649 5 304 6.1E-120 T 26-04-2016 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 66 81 2.3E-6 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 17 37 2.3E-6 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 Hamap MF_00367 GTPase Era [era]. 12 302 36.249 T 26-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 SUPERFAMILY SSF52540 17 210 1.26E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 175 1.9E-31 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 SUPERFAMILY SSF54814 188 302 3.92E-42 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 Pfam PF07650 KH domain 215 290 9.8E-21 T 26-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 Gene3D G3DSA:3.30.300.20 200 299 6.2E-40 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS21785 ec5c945807d397ff8be230a0b025e6fb 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 15 285 3.1E-100 T 26-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.0E-38 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 SUPERFAMILY SSF50104 3 99 9.96E-34 T 26-04-2016 IPR008991 Translation protein SH3-like domain PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 Gene3D G3DSA:2.30.30.30 3 91 8.1E-22 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 26-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF00467 KOW motif 7 31 4.7E-6 T 26-04-2016 IPR005824 KOW PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 SMART SM00739 3 30 1.2E-4 T 26-04-2016 IPR005824 KOW PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 21.4 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 PANTHER PTHR12903 3 98 3.4E-46 T 26-04-2016 PAM18_RS03480 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 2.1E-25 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 Hamap MF_00697 UPF0276 protein . 8 276 45.372 T 26-04-2016 IPR007801 Uncharacterised protein family UPF0276 PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 PANTHER PTHR42194 2 275 2.6E-138 T 26-04-2016 PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 SUPERFAMILY SSF51658 28 206 6.33E-13 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 PANTHER PTHR42194:SF1 2 275 2.6E-138 T 26-04-2016 PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 Gene3D G3DSA:3.20.20.150 7 270 3.3E-98 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS04245 b2fa754087168fbd05251386f1e2fb70 276 Pfam PF05114 Protein of unknown function (DUF692) 8 268 2.5E-98 T 26-04-2016 IPR007801 Uncharacterised protein family UPF0276 PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 Pfam PF09084 NMT1/THI5 like 65 187 5.3E-11 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 SMART SM00062 25 239 2.3E-4 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 PANTHER PTHR30024:SF3 1 318 1.1E-160 T 26-04-2016 PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 305 1.7E-58 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 Gene3D G3DSA:3.40.190.10 102 194 2.5E-22 T 26-04-2016 PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 PANTHER PTHR30024 1 318 1.1E-160 T 26-04-2016 PAM18_RS12225 80a6f3bc1352487de16247a492854c41 318 SUPERFAMILY SSF53850 24 243 1.55E-43 T 26-04-2016 PAM18_RS25205 dcfede94b1d3f1e218f227e2e1f64987 309 PANTHER PTHR11440 27 280 1.3E-36 T 26-04-2016 PAM18_RS25205 dcfede94b1d3f1e218f227e2e1f64987 309 Gene3D G3DSA:3.40.50.1820 24 308 1.7E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25205 dcfede94b1d3f1e218f227e2e1f64987 309 SUPERFAMILY SSF53474 27 305 2.78E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25205 dcfede94b1d3f1e218f227e2e1f64987 309 Pfam PF00561 alpha/beta hydrolase fold 33 135 1.2E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 SUPERFAMILY SSF46689 287 336 4.48E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 Pfam PF12833 Helix-turn-helix domain 257 335 1.5E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 PANTHER PTHR11019:SF52 136 341 3.6E-69 T 26-04-2016 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 Gene3D G3DSA:1.10.10.60 287 335 1.3E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 4.2E-37 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 PANTHER PTHR11019 136 341 3.6E-69 T 26-04-2016 PAM18_RS26325 bc3df8365f3abf4da857c069225fabbd 357 SMART SM00342 251 333 1.8E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 Gene3D G3DSA:3.40.190.10 215 257 5.4E-37 T 26-04-2016 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 Gene3D G3DSA:3.40.190.10 26 113 5.4E-37 T 26-04-2016 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 PANTHER PTHR18966:SF152 8 253 1.6E-89 T 26-04-2016 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 PANTHER PTHR18966 8 253 1.6E-89 T 26-04-2016 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 Gene3D G3DSA:3.40.190.10 115 213 6.1E-27 T 26-04-2016 PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 SMART SM00062 27 256 2.0E-62 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.7E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS10465 87b64b4109d905cadd2073e2248efe48 261 SUPERFAMILY SSF53850 26 258 2.32E-60 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 PANTHER PTHR21248:SF5 2 384 7.8E-113 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 Gene3D G3DSA:3.30.870.10 210 353 3.3E-32 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 Gene3D G3DSA:3.30.870.10 6 182 1.5E-38 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 SUPERFAMILY SSF56024 4 177 3.36E-41 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 Pfam PF13091 PLD-like domain 217 339 6.8E-25 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 Pfam PF13091 PLD-like domain 30 169 3.1E-11 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 SUPERFAMILY SSF56024 207 364 3.36E-38 T 26-04-2016 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 SMART SM00155 291 317 1.4 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 SMART SM00155 109 136 0.39 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS22635 0c673c777b895a1638ffbdf2dadf7f4b 385 PANTHER PTHR21248 2 384 7.8E-113 T 26-04-2016 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 PANTHER PTHR18895 16 294 1.2E-156 T 26-04-2016 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 Gene3D G3DSA:3.40.50.150 97 285 2.4E-43 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 6.9E-92 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 PANTHER PTHR18895:SF69 16 294 1.2E-156 T 26-04-2016 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 1.1E-100 T 26-04-2016 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 SUPERFAMILY SSF53335 63 280 7.99E-46 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 PIRSF PIRSF000401 1 293 9.8E-91 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PAM18_RS25395 6dc5a78bbb79c427f916104234fe4ebf 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 34.06 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 Gene3D G3DSA:1.10.287.950 400 616 2.4E-59 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 Pfam PF16591 Helical bimodular sensor domain 47 285 5.2E-41 T 26-04-2016 IPR032255 Helical bimodular sensor domain PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PANTHER PTHR32089 288 647 1.9E-134 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PANTHER PTHR32089 243 261 1.9E-134 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 541 1.1E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.1E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 483 510 1.1E-21 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 645 1.3E-48 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 Pfam PF00672 HAMP domain 295 367 6.9E-15 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PANTHER PTHR32089:SF64 288 647 1.9E-134 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 PANTHER PTHR32089:SF64 243 261 1.9E-134 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 SMART SM00283 385 646 1.1E-84 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 SMART SM00304 314 370 8.7E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 SMART SM00304 377 423 21.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 SUPERFAMILY SSF58104 343 647 1.31E-78 T 26-04-2016 PAM18_RS26525 2dc63f5d357dc561a209f8b3081dcd86 647 SMART SM01358 37 292 2.1E-35 T 26-04-2016 IPR032255 Helical bimodular sensor domain PAM18_RS28735 363cf9e9e8db0b7bd8c39d5bff3350d4 262 PANTHER PTHR30477 3 260 2.0E-90 T 26-04-2016 PAM18_RS28735 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Pfam PF00950 ABC 3 transport family 2 256 8.3E-79 T 26-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PAM18_RS28735 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Gene3D G3DSA:1.10.3470.10 39 260 1.1E-8 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS28735 363cf9e9e8db0b7bd8c39d5bff3350d4 262 PANTHER PTHR30477:SF0 3 260 2.0E-90 T 26-04-2016 PAM18_RS28735 363cf9e9e8db0b7bd8c39d5bff3350d4 262 SUPERFAMILY SSF81345 3 253 7.72E-40 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 Gene3D G3DSA:3.30.450.90 167 290 2.0E-51 T 26-04-2016 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 146 4.0E-13 T 26-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 PANTHER PTHR30258 1 565 2.8E-264 T 26-04-2016 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 566 6.0E-257 T 26-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 SUPERFAMILY SSF52540 176 564 2.77E-100 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 Gene3D G3DSA:3.40.50.300 298 565 3.1E-97 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 Pfam PF00437 Type II/IV secretion system protein 190 457 2.8E-89 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 SUPERFAMILY SSF160246 4 144 5.1E-34 T 26-04-2016 PAM18_RS23590 d2d6e910e49f631371d11f0058278bb3 566 PANTHER PTHR30258:SF1 1 565 2.8E-264 T 26-04-2016 PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 4.0E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF03466 LysR substrate binding domain 101 302 2.5E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF53850 97 302 4.71E-24 T 26-04-2016 PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:3.40.190.10 95 204 7.1E-11 T 26-04-2016 PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF46785 16 101 3.44E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 PANTHER PTHR30126 15 302 4.1E-88 T 26-04-2016 PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:1.10.10.10 15 94 4.0E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00675 88ef7ef97b92cde4e92600ec88258018 305 PANTHER PTHR30126:SF31 15 302 4.1E-88 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 SUPERFAMILY SSF69349 442 493 1.41E-9 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 SUPERFAMILY SSF69279 197 365 2.04E-31 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 SUPERFAMILY SSF69255 364 451 1.02E-33 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 4.3E-120 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 616 759 8.5E-49 T 26-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 8.9E-34 T 26-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 PANTHER PTHR32305:SF11 6 748 0.0 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 1.2E-160 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 Gene3D G3DSA:2.40.50.230 370 451 1.2E-39 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 1.1E-74 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 Gene3D G3DSA:3.55.50.10 96 183 1.7E-24 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 PANTHER PTHR32305 6 748 0.0 T 26-04-2016 PAM18_RS18530 a6b885d22503cf986cc5029e23e18132 842 SUPERFAMILY SSF69279 9 182 1.11E-47 T 26-04-2016 PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 PANTHER PTHR37486 1 135 1.6E-81 T 26-04-2016 PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 PIRSF PIRSF005276 1 135 2.3E-55 T 26-04-2016 IPR007481 Stringent starvation protein B PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 SUPERFAMILY SSF101738 1 114 1.31E-47 T 26-04-2016 IPR007481 Stringent starvation protein B PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 Gene3D G3DSA:2.30.30.220 1 103 2.1E-47 T 26-04-2016 IPR007481 Stringent starvation protein B PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 PANTHER PTHR37486:SF1 1 135 1.6E-81 T 26-04-2016 PAM18_RS23085 782f88f8389411e71ec36512086af93c 135 Pfam PF04386 Stringent starvation protein B 4 135 1.7E-35 T 26-04-2016 IPR007481 Stringent starvation protein B PAM18_RS06875 13b8a3dadc75020aadf27246c1e3a669 110 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 2 101 1.5E-29 T 26-04-2016 IPR006481 Bacteriophage lambda, GpS, holin PAM18_RS06875 13b8a3dadc75020aadf27246c1e3a669 110 Pfam PF05106 Phage holin family (Lysis protein S) 5 100 2.7E-31 T 26-04-2016 IPR006481 Bacteriophage lambda, GpS, holin PAM18_RS04025 e263a93253ec29126d2ee79576d20d5f 346 PIRSF PIRSF018567 1 346 8.3E-167 T 26-04-2016 IPR011391 Acetoin catabolism kinase AcoX UniPathway: UPA00040 PAM18_RS04025 e263a93253ec29126d2ee79576d20d5f 346 SUPERFAMILY SSF111331 92 146 6.8E-7 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PAM18_RS04025 e263a93253ec29126d2ee79576d20d5f 346 Pfam PF01513 ATP-NAD kinase 8 232 1.1E-15 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 Gene3D G3DSA:3.90.1150.10 256 383 3.1E-35 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 PANTHER PTHR11751:SF301 16 383 1.9E-138 T 26-04-2016 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 Gene3D G3DSA:3.40.640.10 47 255 1.2E-71 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 PANTHER PTHR11751 16 383 1.9E-138 T 26-04-2016 PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 SUPERFAMILY SSF53383 15 383 1.22E-111 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS26035 6818520878291142bc0bd8a3d0ad829c 393 Pfam PF00155 Aminotransferase class I and II 33 382 2.0E-71 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS00980 7cb44fee851f869a85c4e4d17e2a8987 299 PANTHER PTHR30468:SF18 1 299 1.6E-158 T 26-04-2016 PAM18_RS00980 7cb44fee851f869a85c4e4d17e2a8987 299 SUPERFAMILY SSF51197 19 293 2.34E-70 T 26-04-2016 PAM18_RS00980 7cb44fee851f869a85c4e4d17e2a8987 299 Gene3D G3DSA:3.60.130.10 14 299 4.3E-68 T 26-04-2016 PAM18_RS00980 7cb44fee851f869a85c4e4d17e2a8987 299 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 20 291 3.2E-55 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS00980 7cb44fee851f869a85c4e4d17e2a8987 299 PANTHER PTHR30468 1 299 1.6E-158 T 26-04-2016 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PANTHER PTHR10992 7 295 2.2E-47 T 26-04-2016 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PRINTS PR00412 Epoxide hydrolase signature 236 252 6.5E-16 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PRINTS PR00412 Epoxide hydrolase signature 270 292 6.5E-16 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PRINTS PR00412 Epoxide hydrolase signature 99 112 6.5E-16 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PRINTS PR00412 Epoxide hydrolase signature 51 66 6.5E-16 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PRINTS PR00412 Epoxide hydrolase signature 31 49 6.5E-16 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 SUPERFAMILY SSF53474 5 294 1.08E-48 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 Pfam PF00561 alpha/beta hydrolase fold 28 278 2.5E-14 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 PANTHER PTHR10992:SF877 7 295 2.2E-47 T 26-04-2016 PAM18_RS04810 e46100a64b5780c333c6aa0e03c6d8df 296 Gene3D G3DSA:3.40.50.1820 4 295 3.1E-51 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 820 2.7E-147 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 SMART SM00965 78 129 2.9E-9 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 PANTHER PTHR32552:SF21 129 144 0.0 T 26-04-2016 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 PANTHER PTHR32552:SF21 164 820 0.0 T 26-04-2016 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 SUPERFAMILY SSF56935 135 820 1.83E-145 T 26-04-2016 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 Gene3D G3DSA:2.170.130.10 153 285 8.1E-36 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 Pfam PF00593 TonB dependent receptor 584 819 5.6E-36 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 PANTHER PTHR32552 129 144 0.0 T 26-04-2016 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 PANTHER PTHR32552 164 820 0.0 T 26-04-2016 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 Gene3D G3DSA:2.40.170.20 293 820 4.9E-169 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS13250 90a9cc9b0523a228fded26123845de5d 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 277 2.8E-21 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 SUPERFAMILY SSF161098 189 403 9.94E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 Gene3D G3DSA:1.10.3720.10 179 409 1.6E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 Gene3D G3DSA:1.10.3720.10 33 59 1.6E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 407 1.7E-10 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 PANTHER PTHR30193:SF8 178 415 4.4E-168 T 26-04-2016 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 PANTHER PTHR30193:SF8 3 71 4.4E-168 T 26-04-2016 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 PANTHER PTHR30193 178 415 4.4E-168 T 26-04-2016 PAM18_RS03065 04c9e25e92ec012f666f780cefd60054 415 PANTHER PTHR30193 3 71 4.4E-168 T 26-04-2016 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:3.40.50.620 115 464 3.6E-110 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:1.10.730.10 465 587 9.3E-34 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PANTHER PTHR11956:SF1 1 587 8.6E-263 T 26-04-2016 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 1 587 5.5E-167 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 9.8E-25 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF55190 1 103 7.85E-24 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Gene3D G3DSA:3.30.1360.70 1 109 5.0E-31 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF52374 114 464 3.27E-88 T 26-04-2016 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 SMART SM01016 3 91 2.8E-38 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 SUPERFAMILY SSF47323 465 587 3.53E-33 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 587 26.626 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PANTHER PTHR11956 1 587 8.6E-263 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF05746 DALR anticodon binding domain 471 587 1.8E-31 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 Pfam PF00750 tRNA synthetases class I (R) 101 457 1.8E-125 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 5.7E-26 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 5.7E-26 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 5.7E-26 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 5.7E-26 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 PAM18_RS26420 2eb9b88e86d5827421cebf1d94398a50 587 SMART SM00836 471 587 8.8E-36 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.751 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 PIRSF PIRSF002211 1 58 5.8E-24 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 Gene3D G3DSA:3.30.1390.20 1 57 5.3E-27 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 3.9E-20 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 PANTHER PTHR15892 1 57 1.1E-24 T 26-04-2016 PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 SUPERFAMILY SSF55129 1 57 5.89E-20 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PAM18_RS03515 bed1dda5b58a3fb6c37a198a2dae8687 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 52 1.1E-17 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PAM18_RS25430 8caa4acd482d69c22841f9587af12802 197 Pfam PF01914 MarC family integral membrane protein 2 193 7.0E-37 T 26-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PAM18_RS25430 8caa4acd482d69c22841f9587af12802 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 190 4.5E-32 T 26-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PAM18_RS25430 8caa4acd482d69c22841f9587af12802 197 PANTHER PTHR33508:SF1 1 192 4.0E-63 T 26-04-2016 PAM18_RS25430 8caa4acd482d69c22841f9587af12802 197 PANTHER PTHR33508 1 192 4.0E-63 T 26-04-2016 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 6 372 4.4E-151 T 26-04-2016 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 Gene3D G3DSA:3.30.390.10 5 131 8.6E-44 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 SUPERFAMILY SSF51604 129 370 5.5E-61 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 SUPERFAMILY SSF54826 6 130 1.44E-32 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 PANTHER PTHR13794:SF55 3 373 2.2E-139 T 26-04-2016 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 195 226 - T 26-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 SMART SM00922 147 245 5.1E-17 T 26-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 Pfam PF13378 Enolase C-terminal domain-like 152 365 1.5E-43 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 129 1.2E-35 T 26-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 104 129 - T 26-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 Gene3D G3DSA:3.20.20.120 132 359 1.0E-61 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS13040 b870ca769bdb734e7144d6479862af9b 373 PANTHER PTHR13794 3 373 2.2E-139 T 26-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 Gene3D G3DSA:3.40.50.150 85 274 6.5E-69 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 PANTHER PTHR18895:SF64 12 274 2.2E-109 T 26-04-2016 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 Pfam PF05175 Methyltransferase small domain 94 185 8.4E-15 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 PANTHER PTHR18895 12 274 2.2E-109 T 26-04-2016 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 274 46.395 T 26-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 270 3.4E-89 T 26-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 SUPERFAMILY SSF53335 12 272 2.99E-52 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 Gene3D G3DSA:1.10.8.10 11 83 1.3E-23 T 26-04-2016 PAM18_RS24325 26bcb93a93d1f7b8da0717c28d71f2b5 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 274 8.8E-78 T 26-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PAM18_RS23800 a4041d29f3bd2b2423d85998f8e74521 154 PANTHER PTHR37952:SF2 7 153 5.8E-82 T 26-04-2016 PAM18_RS23800 a4041d29f3bd2b2423d85998f8e74521 154 Pfam PF05981 CreA protein 23 150 3.2E-59 T 26-04-2016 IPR010292 Uncharacterised protein family CreA PAM18_RS23800 a4041d29f3bd2b2423d85998f8e74521 154 PIRSF PIRSF003174 1 154 1.2E-69 T 26-04-2016 IPR010292 Uncharacterised protein family CreA PAM18_RS23800 a4041d29f3bd2b2423d85998f8e74521 154 PANTHER PTHR37952 7 153 5.8E-82 T 26-04-2016 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 2.0E-52 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 4.0E-68 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 SUPERFAMILY SSF74982 5 136 1.22E-50 T 26-04-2016 IPR023620 Small protein B PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 PANTHER PTHR30308 1 159 1.0E-80 T 26-04-2016 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 Gene3D G3DSA:2.40.280.10 11 131 1.4E-49 T 26-04-2016 IPR023620 Small protein B PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 26-04-2016 IPR020081 SsrA-binding protein, conserved site PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 Pfam PF01668 SmpB protein 11 74 1.8E-28 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 71.799 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 PAM18_RS24970 b565538431fb1b23d020d29b8090d5c0 159 PANTHER PTHR30308:SF2 1 159 1.0E-80 T 26-04-2016 PAM18_RS12745 496b3bd28b6ff3853accd2ab37a549bb 141 Pfam PF07849 Protein of unknown function (DUF1641) 95 128 1.6E-9 T 26-04-2016 IPR012440 Protein of unknown function DUF1641 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 PANTHER PTHR30177:SF14 26 316 7.5E-196 T 26-04-2016 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 PANTHER PTHR30177 26 316 7.5E-196 T 26-04-2016 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 312 4.7E-61 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 Gene3D G3DSA:3.40.190.10 26 107 1.4E-15 T 26-04-2016 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 Gene3D G3DSA:3.40.190.10 265 323 1.4E-15 T 26-04-2016 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 Gene3D G3DSA:3.40.190.100 108 264 5.6E-45 T 26-04-2016 PAM18_RS26675 68b95faea70aabd1a602fa0a21d55f61 334 SUPERFAMILY SSF53850 21 328 2.06E-77 T 26-04-2016 PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Gene3D G3DSA:3.40.50.300 303 326 5.7E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Gene3D G3DSA:3.40.50.300 62 109 5.7E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Gene3D G3DSA:3.40.50.300 415 523 5.7E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Gene3D G3DSA:3.40.50.300 250 268 5.7E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 390 504 7.3E-11 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 TIGRFAM TIGR04435 restrict_AAA_1: restriction system-associated AAA family ATPase 1 598 3.1E-241 T 26-04-2016 IPR030974 Restriction system-associated AAA family ATPase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 SUPERFAMILY SSF52540 48 238 2.45E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 SUPERFAMILY SSF52540 378 517 2.45E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11520 f7af16809dc1db8faf26150617ff8c7b 610 Gene3D G3DSA:3.40.50.300 1 61 7.9E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22665 03beeacab64e950f5c0c459e288933f0 196 Pfam PF04264 YceI-like domain 21 162 9.2E-13 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22665 03beeacab64e950f5c0c459e288933f0 196 SUPERFAMILY SSF101874 19 188 5.49E-22 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22665 03beeacab64e950f5c0c459e288933f0 196 SMART SM00867 20 189 1.0E-18 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22665 03beeacab64e950f5c0c459e288933f0 196 PIRSF PIRSF029811 1 191 3.2E-69 T 26-04-2016 IPR027016 Uncharacterised protein with YceI domain PAM18_RS22665 03beeacab64e950f5c0c459e288933f0 196 Gene3D G3DSA:2.40.128.110 18 170 2.8E-16 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS12870 0d360ba08a14cfe215a116ce26d5affe 1221 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 900 1221 6.3E-59 T 26-04-2016 IPR007452 Translocation and assembly module TamB PAM18_RS12870 0d360ba08a14cfe215a116ce26d5affe 1221 PANTHER PTHR36985 1 1221 0.0 T 26-04-2016 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 SUPERFAMILY SSF103473 16 424 1.7E-59 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 PANTHER PTHR23508 1 429 1.5E-287 T 26-04-2016 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 Gene3D G3DSA:1.20.1250.20 16 217 9.7E-26 T 26-04-2016 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 Gene3D G3DSA:1.20.1250.20 238 423 5.4E-16 T 26-04-2016 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 Pfam PF07690 Major Facilitator Superfamily 23 376 8.1E-20 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS22135 39ed4b23eda78eb13d8f90416dea2955 438 PANTHER PTHR23508:SF13 1 429 1.5E-287 T 26-04-2016 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 Pfam PF01204 Trehalase 66 542 5.7E-171 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PANTHER PTHR23403:SF13 49 543 0.0 T 26-04-2016 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 Hamap MF_01060 Periplasmic trehalase [treA]. 2 543 84.716 T 26-04-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 ProSitePatterns PS00927 Trehalase signature 1. 159 172 - T 26-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 ProSitePatterns PS00928 Trehalase signature 2. 455 464 - T 26-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PANTHER PTHR23403 49 543 0.0 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 SUPERFAMILY SSF48208 51 544 1.4E-160 T 26-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 525 538 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 276 293 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 342 359 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 201 219 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 448 464 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS13510 bc23f7187e222a41336e72754245527f 547 PRINTS PR00744 Glycosyl hydrolase family 37 signature 310 327 6.3E-41 T 26-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 SUPERFAMILY SSF46785 2 83 1.07E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 PANTHER PTHR30346:SF7 1 301 5.1E-128 T 26-04-2016 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 SUPERFAMILY SSF53850 91 299 5.31E-39 T 26-04-2016 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 Pfam PF03466 LysR substrate binding domain 91 295 3.8E-46 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-25 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-11 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 PANTHER PTHR30346 1 301 5.1E-128 T 26-04-2016 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:3.40.190.10 88 172 3.6E-26 T 26-04-2016 PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:1.10.10.10 2 82 1.6E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26310 87bb11c40d6046c2505bfc2eac48686e 301 Gene3D G3DSA:3.40.190.10 173 269 1.7E-37 T 26-04-2016 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 1.6E-162 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.95E-69 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 SUPERFAMILY SSF55681 10 291 1.57E-136 T 26-04-2016 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 3.0E-152 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:1.20.58.180 217 298 1.6E-36 T 26-04-2016 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:3.30.930.10 4 216 1.2E-107 T 26-04-2016 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 PANTHER PTHR30075 1 315 1.6E-266 T 26-04-2016 PAM18_RS00045 9c5e64ae51abacc04b9793a3ffdb9532 315 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.704 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 PAM18_RS25700 833510b79777576ac7dc2ef51dfaa462 425 PANTHER PTHR30482:SF9 66 424 7.8E-184 T 26-04-2016 PAM18_RS25700 833510b79777576ac7dc2ef51dfaa462 425 Pfam PF11862 Domain of unknown function (DUF3382) 13 109 1.0E-19 T 26-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PAM18_RS25700 833510b79777576ac7dc2ef51dfaa462 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 117 402 1.9E-46 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS25700 833510b79777576ac7dc2ef51dfaa462 425 PANTHER PTHR30482 66 424 7.8E-184 T 26-04-2016 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 PANTHER PTHR16099:SF5 1 136 2.7E-61 T 26-04-2016 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 PRINTS PR00502 NUDIX hydrolase family signature 46 61 7.5E-7 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 PRINTS PR00502 NUDIX hydrolase family signature 32 46 7.5E-7 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 Gene3D G3DSA:3.90.79.10 2 120 1.4E-33 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 SUPERFAMILY SSF55811 4 128 8.39E-31 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 Pfam PF00293 NUDIX domain 5 120 3.7E-21 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS11285 f83ba39f51bc5feaa6d5c5ad4f650dad 136 PANTHER PTHR16099 1 136 2.7E-61 T 26-04-2016 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 SUPERFAMILY SSF52540 298 518 1.08E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 Pfam PF12848 ABC transporter 217 295 1.1E-29 T 26-04-2016 IPR032781 ABC-transporter extension domain PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 PANTHER PTHR19211:SF49 1 555 0.0 T 26-04-2016 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 SUPERFAMILY SSF52540 119 256 1.75E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 SUPERFAMILY SSF52540 2 92 1.75E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 PANTHER PTHR19211 1 555 0.0 T 26-04-2016 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 Pfam PF00005 ABC transporter 18 178 2.6E-20 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 Pfam PF00005 ABC transporter 328 459 5.2E-21 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 Gene3D G3DSA:3.40.50.300 1 266 6.5E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 Gene3D G3DSA:3.40.50.300 313 526 3.7E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 SMART SM00382 26 223 1.3E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27450 03cea5d6dc196f118f307444bdbde142 638 SMART SM00382 337 504 2.1E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS09285 d050d946f65ede25189541fc05179257 354 Pfam PF02706 Chain length determinant protein 15 165 2.9E-20 T 26-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PAM18_RS09285 d050d946f65ede25189541fc05179257 354 Gene3D G3DSA:3.30.1890.10 51 231 1.3E-19 T 26-04-2016 PAM18_RS09285 d050d946f65ede25189541fc05179257 354 SUPERFAMILY SSF160355 53 316 1.05E-56 T 26-04-2016 PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 Pfam PF12146 Serine aminopeptidase, S33 32 267 1.8E-65 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 SUPERFAMILY SSF53335 400 575 1.48E-14 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 PANTHER PTHR11614:SF106 1 304 2.3E-201 T 26-04-2016 PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 Pfam PF12147 Putative methyltransferase 276 583 1.6E-156 T 26-04-2016 IPR022744 Methyltransferase domain, putative PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 Gene3D G3DSA:3.40.50.1820 13 279 4.9E-34 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 Gene3D G3DSA:3.40.50.150 392 578 4.8E-9 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 SUPERFAMILY SSF53474 4 282 6.87E-34 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS12880 01a4067c4a2c847850325628e71ca1cd 586 PANTHER PTHR11614 1 304 2.3E-201 T 26-04-2016 PAM18_RS26305 7ae430ed7126c0d978fe492a1f070331 255 SUPERFAMILY SSF52540 1 254 2.15E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26305 7ae430ed7126c0d978fe492a1f070331 255 Gene3D G3DSA:3.40.50.300 3 250 2.0E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26305 7ae430ed7126c0d978fe492a1f070331 255 Pfam PF13614 AAA domain 5 183 2.1E-37 T 26-04-2016 IPR025669 AAA domain PAM18_RS26305 7ae430ed7126c0d978fe492a1f070331 255 PANTHER PTHR13696:SF66 4 254 4.1E-128 T 26-04-2016 PAM18_RS26305 7ae430ed7126c0d978fe492a1f070331 255 PANTHER PTHR13696 4 254 4.1E-128 T 26-04-2016 PAM18_RS26495 4fb2fcab1a2724bba55d318d23fbe346 134 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 1.0E-24 T 26-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PAM18_RS26495 4fb2fcab1a2724bba55d318d23fbe346 134 SUPERFAMILY SSF141734 4 120 4.84E-49 T 26-04-2016 PAM18_RS26495 4fb2fcab1a2724bba55d318d23fbe346 134 PANTHER PTHR21256 1 127 2.0E-67 T 26-04-2016 PAM18_RS26495 4fb2fcab1a2724bba55d318d23fbe346 134 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.986 T 26-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PAM18_RS26495 4fb2fcab1a2724bba55d318d23fbe346 134 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 1.5E-33 T 26-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 PAM18_RS23955 2c4635017a658280ebde972266a77645 237 Gene3D G3DSA:3.40.50.300 9 231 4.2E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23955 2c4635017a658280ebde972266a77645 237 PANTHER PTHR24220 12 231 3.5E-153 T 26-04-2016 PAM18_RS23955 2c4635017a658280ebde972266a77645 237 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23955 2c4635017a658280ebde972266a77645 237 Pfam PF00005 ABC transporter 30 178 4.6E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23955 2c4635017a658280ebde972266a77645 237 SMART SM00382 39 227 6.6E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23955 2c4635017a658280ebde972266a77645 237 PANTHER PTHR24220:SF551 12 231 3.5E-153 T 26-04-2016 PAM18_RS23955 2c4635017a658280ebde972266a77645 237 SUPERFAMILY SSF52540 10 230 8.13E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10665 9fc214fada44864f4863611dd6639a2f 254 Pfam PF02517 CAAX protease self-immunity 150 239 8.4E-14 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 PAM18_RS10665 9fc214fada44864f4863611dd6639a2f 254 PANTHER PTHR40041:SF2 3 254 8.5E-143 T 26-04-2016 PAM18_RS10665 9fc214fada44864f4863611dd6639a2f 254 PANTHER PTHR40041 3 254 8.5E-143 T 26-04-2016 PAM18_RS15145 9a31cd5554ff8acfd3639085f91ba4ff 426 SUPERFAMILY SSF103473 32 414 2.22E-51 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15145 9a31cd5554ff8acfd3639085f91ba4ff 426 PANTHER PTHR23536 3 426 8.8E-91 T 26-04-2016 PAM18_RS15145 9a31cd5554ff8acfd3639085f91ba4ff 426 Gene3D G3DSA:1.20.1250.20 36 213 5.1E-25 T 26-04-2016 PAM18_RS15145 9a31cd5554ff8acfd3639085f91ba4ff 426 Gene3D G3DSA:1.20.1250.20 234 409 2.8E-15 T 26-04-2016 PAM18_RS15145 9a31cd5554ff8acfd3639085f91ba4ff 426 Pfam PF07690 Major Facilitator Superfamily 42 374 1.7E-38 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 PANTHER PTHR10434:SF15 346 624 1.3E-176 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 Gene3D G3DSA:1.20.1250.20 228 422 1.5E-11 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 Gene3D G3DSA:1.20.1250.20 36 200 5.5E-5 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 SUPERFAMILY SSF103473 12 426 1.31E-26 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 Pfam PF01553 Acyltransferase 443 570 1.5E-23 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 PANTHER PTHR10434 346 624 1.3E-176 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 Gene3D G3DSA:3.40.1130.10 426 570 2.7E-16 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 SUPERFAMILY SSF69593 385 573 2.88E-28 T 26-04-2016 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 Pfam PF07690 Major Facilitator Superfamily 19 387 4.7E-17 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS08725 2bda8852351b4779b6d5f336a1097758 624 SMART SM00563 457 573 3.5E-28 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.970 51 460 6.2E-155 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PIRSF PIRSF000156 1 882 0.0 T 26-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 2 880 0.0 T 26-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624:SF72 546 761 0.0 T 26-04-2016 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624:SF72 465 528 0.0 T 26-04-2016 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624:SF72 357 448 0.0 T 26-04-2016 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624:SF72 69 288 0.0 T 26-04-2016 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624:SF72 780 864 0.0 T 26-04-2016 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 123 287 4.1E-8 T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52518 466 693 2.94E-97 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.920 699 880 4.9E-80 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52518 52 460 6.59E-140 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624 546 761 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624 465 528 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624 357 448 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624 69 288 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 PANTHER PTHR11624 780 864 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52922 694 880 1.17E-63 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS26240 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.970 466 697 5.0E-120 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 472 43.794 T 26-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 PANTHER PTHR23135:SF5 10 460 1.2E-225 T 26-04-2016 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF08245 Mur ligase middle domain 120 299 9.5E-28 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 PANTHER PTHR23135 10 460 1.2E-225 T 26-04-2016 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.40.50.720 16 102 2.2E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF53623 101 318 1.27E-74 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF51984 16 102 4.05E-29 T 26-04-2016 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 466 9.8E-170 T 26-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 410 8.4E-21 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF01225 Mur ligase family, catalytic domain 17 115 3.7E-27 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.40.1190.10 104 321 1.2E-83 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.90.190.20 322 468 2.5E-53 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23005 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF53244 319 468 8.79E-47 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS04485 37945c85de07985422b037fabd07d996 220 PANTHER PTHR18895 57 176 1.9E-21 T 26-04-2016 PAM18_RS04485 37945c85de07985422b037fabd07d996 220 SUPERFAMILY SSF53335 18 174 2.67E-25 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS04485 37945c85de07985422b037fabd07d996 220 Gene3D G3DSA:3.40.50.150 42 181 8.7E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS04485 37945c85de07985422b037fabd07d996 220 PANTHER PTHR18895:SF3 57 176 1.9E-21 T 26-04-2016 PAM18_RS04485 37945c85de07985422b037fabd07d996 220 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 81 153 8.6E-16 T 26-04-2016 PAM18_RS15205 33bdcd3e205ab7dedda22aa21eeef5c3 468 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS15205 33bdcd3e205ab7dedda22aa21eeef5c3 468 PANTHER PTHR11785:SF317 1 465 0.0 T 26-04-2016 PAM18_RS15205 33bdcd3e205ab7dedda22aa21eeef5c3 468 PANTHER PTHR11785 1 465 0.0 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS15205 33bdcd3e205ab7dedda22aa21eeef5c3 468 Pfam PF00324 Amino acid permease 26 433 1.5E-88 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS15205 33bdcd3e205ab7dedda22aa21eeef5c3 468 PIRSF PIRSF006060 8 467 1.3E-65 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS03590 fdd6f14287632b8f647fc1d8d35250df 91 Pfam PF01381 Helix-turn-helix 11 60 3.4E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS03590 fdd6f14287632b8f647fc1d8d35250df 91 SMART SM00530 10 63 5.3E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS03590 fdd6f14287632b8f647fc1d8d35250df 91 Gene3D G3DSA:1.10.260.40 1 63 3.1E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS03590 fdd6f14287632b8f647fc1d8d35250df 91 SUPERFAMILY SSF47413 2 64 1.77E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 SMART SM00448 3 116 1.6E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 Gene3D G3DSA:3.40.50.2300 4 120 1.7E-37 T 26-04-2016 PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 Pfam PF00072 Response regulator receiver domain 5 115 1.8E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 SUPERFAMILY SSF52172 3 120 4.27E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 PANTHER PTHR26402 3 120 2.7E-50 T 26-04-2016 PAM18_RS00905 9d61b2673483b9b517d6fe068afb1581 121 PANTHER PTHR26402:SF586 3 120 2.7E-50 T 26-04-2016 PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 Gene3D G3DSA:3.40.50.720 3 114 2.3E-29 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 6.1E-59 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 SUPERFAMILY SSF52283 1 133 6.05E-28 T 26-04-2016 PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 Gene3D G3DSA:3.40.50.720 115 289 1.0E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 SUPERFAMILY SSF51735 100 287 8.86E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 PANTHER PTHR10996 1 324 5.5E-140 T 26-04-2016 PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 7.5E-28 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS05300 04c0cf5962d39086db350b0ed763ac6e 325 PANTHER PTHR10996:SF118 1 324 5.5E-140 T 26-04-2016 PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 Pfam PF01368 DHH family 69 197 9.0E-10 T 26-04-2016 IPR001667 DDH domain PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 PANTHER PTHR30255:SF2 1 571 9.9E-223 T 26-04-2016 PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 SUPERFAMILY SSF64182 44 459 1.02E-118 T 26-04-2016 PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 Pfam PF02272 DHHA1 domain 376 444 3.5E-17 T 26-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 566 3.0E-149 T 26-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 PAM18_RS06185 414b7e35785fa18cf36876ac625185d1 571 PANTHER PTHR30255 1 571 9.9E-223 T 26-04-2016 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 SUPERFAMILY SSF51445 3 287 2.95E-82 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 26-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 330 49.824 T 26-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 Gene3D G3DSA:3.20.20.300 5 287 1.4E-89 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 294 1.1E-77 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 PANTHER PTHR30480:SF7 5 317 1.6E-126 T 26-04-2016 PAM18_RS10045 0f988fae7437c1f44cea5daf6855d483 332 PANTHER PTHR30480 5 317 1.6E-126 T 26-04-2016 PAM18_RS08905 98120d9a164655b78d9bc25d2e1ddea7 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.5E-33 T 26-04-2016 IPR007436 Protein of unknown function DUF485 PAM18_RS08905 98120d9a164655b78d9bc25d2e1ddea7 103 PANTHER PTHR38598 2 103 5.3E-49 T 26-04-2016 PAM18_RS16730 787f31e590fe7ea257c42f5f291aae53 231 Pfam PF08787 Alginate lyase 2 230 4.8E-61 T 26-04-2016 IPR014895 Alginate lyase 2 PAM18_RS16730 787f31e590fe7ea257c42f5f291aae53 231 Gene3D G3DSA:2.60.120.200 1 230 7.2E-59 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS16730 787f31e590fe7ea257c42f5f291aae53 231 SUPERFAMILY SSF49899 2 230 7.91E-74 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 Pfam PF14870 Photosynthesis system II assembly factor YCF48 151 237 5.8E-16 T 26-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 Gene3D G3DSA:2.130.10.140 80 267 7.3E-34 T 26-04-2016 PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 Gene3D G3DSA:2.130.10.140 268 359 7.7E-11 T 26-04-2016 PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 SUPERFAMILY SSF110296 77 323 1.05E-50 T 26-04-2016 PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 PANTHER PTHR32010 15 271 3.1E-53 T 26-04-2016 PAM18_RS09680 0d8fa21c488d59a473570c91c16c0634 365 Pfam PF15899 BNR-Asp box repeat 265 278 0.059 T 26-04-2016 IPR002860 BNR repeat PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 PANTHER PTHR10516 86 204 9.2E-95 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 PANTHER PTHR10516 6 67 9.2E-95 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 SUPERFAMILY SSF54534 7 204 2.95E-55 T 26-04-2016 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 3.5E-26 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 PANTHER PTHR10516:SF320 86 204 9.2E-95 T 26-04-2016 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 PANTHER PTHR10516:SF320 6 67 9.2E-95 T 26-04-2016 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:3.10.50.40 94 204 5.8E-42 T 26-04-2016 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:1.10.287.460 3 93 5.7E-24 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS23840 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 108 6.3E-24 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 SUPERFAMILY SSF56935 111 804 3.93E-140 T 26-04-2016 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 803 2.8E-122 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 SMART SM00965 57 108 5.9E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 PANTHER PTHR32552:SF10 1 34 2.8E-219 T 26-04-2016 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 PANTHER PTHR32552:SF10 141 804 2.8E-219 T 26-04-2016 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 Gene3D G3DSA:2.170.130.10 130 254 8.4E-33 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 Gene3D G3DSA:2.40.170.20 263 804 3.2E-166 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 Pfam PF00593 TonB dependent receptor 563 803 1.3E-32 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 PANTHER PTHR32552 1 34 2.8E-219 T 26-04-2016 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 PANTHER PTHR32552 141 804 2.8E-219 T 26-04-2016 PAM18_RS02380 6945913e8e66167b28fc8cb871f64c51 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 248 2.6E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS05195 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 Gene3D G3DSA:3.10.20.30 1 83 8.3E-25 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS05195 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 Pfam PF02597 ThiS family 4 83 3.2E-19 T 26-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PAM18_RS05195 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 83 6.6E-19 T 26-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 PAM18_RS05195 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 SUPERFAMILY SSF54285 1 83 7.66E-22 T 26-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAM18_RS05195 71576fb27b3d1c9fd5fbd53f9dc8ea53 83 PANTHER PTHR33359 1 83 7.1E-25 T 26-04-2016 PAM18_RS11820 a81265457bf8621eb4c7c9543137708a 141 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 1.0E-6 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS11820 a81265457bf8621eb4c7c9543137708a 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS26635 0229a2302441b6c2cb73e60df59b997f 283 Gene3D G3DSA:1.10.3720.10 87 270 5.3E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26635 0229a2302441b6c2cb73e60df59b997f 283 PANTHER PTHR30177 6 283 2.8E-185 T 26-04-2016 PAM18_RS26635 0229a2302441b6c2cb73e60df59b997f 283 PANTHER PTHR30177:SF10 6 283 2.8E-185 T 26-04-2016 PAM18_RS26635 0229a2302441b6c2cb73e60df59b997f 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 1.9E-26 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26635 0229a2302441b6c2cb73e60df59b997f 283 SUPERFAMILY SSF161098 87 271 9.42E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 11 216 6.6E-96 T 26-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 PANTHER PTHR11820 39 219 1.3E-104 T 26-04-2016 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 Gene3D G3DSA:3.90.850.10 12 218 2.8E-60 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 SUPERFAMILY SSF56529 11 217 3.66E-61 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 PANTHER PTHR11820:SF8 39 219 1.3E-104 T 26-04-2016 PAM18_RS04165 9b711b98e406d0c516c723ec188f276f 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 14 216 1.9E-51 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896:SF80 530 732 4.5E-231 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896:SF80 31 116 4.5E-231 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896:SF80 272 451 4.5E-231 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SUPERFAMILY SSF56024 631 692 4.04E-16 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SUPERFAMILY SSF56024 372 508 4.04E-16 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 176 211 8.6E-26 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 305 413 8.6E-26 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 32 105 8.6E-26 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 264 265 8.6E-26 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 639 702 1.9E-13 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 Gene3D G3DSA:3.30.870.10 414 548 1.9E-13 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896 530 732 4.5E-231 T 26-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896 31 116 4.5E-231 T 26-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 PANTHER PTHR18896 272 451 4.5E-231 T 26-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SMART SM00155 300 331 7.0 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SMART SM00155 637 664 0.009 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SUPERFAMILY SSF56024 22 114 3.34E-27 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SUPERFAMILY SSF56024 235 258 3.34E-27 T 26-04-2016 PAM18_RS26605 512b20029aee5f6494dac9bf056dc0cd 745 SUPERFAMILY SSF56024 296 394 3.34E-27 T 26-04-2016 PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 151 166 8.5E-13 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 121 143 8.5E-13 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 166 182 8.5E-13 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF13488 Glycine zipper 47 90 5.8E-9 T 26-04-2016 PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF00691 OmpA family 120 215 1.5E-23 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 Gene3D G3DSA:3.30.1330.60 100 221 7.6E-42 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 SUPERFAMILY SSF103088 108 223 6.67E-40 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS21485 a2f08a9ab69a8b648ca91800100b106b 237 PANTHER PTHR30128 44 235 1.2E-60 T 26-04-2016 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 Pfam PF00593 TonB dependent receptor 515 751 8.2E-38 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 SUPERFAMILY SSF56935 75 753 8.98E-134 T 26-04-2016 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 178 6.4E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 PANTHER PTHR32552 14 753 0.0 T 26-04-2016 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 753 3.6E-98 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 PANTHER PTHR32552:SF8 14 753 0.0 T 26-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 Gene3D G3DSA:2.170.130.10 61 185 4.5E-30 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS23520 b68bcbdc5f9c89afd2d56f5601d5bd51 753 Gene3D G3DSA:2.40.170.20 193 753 7.7E-158 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 3.8E-55 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PIRSF PIRSF001365 1 293 5.4E-87 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PANTHER PTHR12128:SF34 1 292 1.4E-100 T 26-04-2016 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 Gene3D G3DSA:3.20.20.70 3 292 1.6E-92 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.8E-10 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.8E-10 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 SUPERFAMILY SSF51569 3 292 1.15E-85 T 26-04-2016 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 PANTHER PTHR12128 1 292 1.4E-100 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS01105 b77e6ce12f0f93adf103ebeccf4c35f2 293 SMART SM01130 4 293 2.1E-99 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 Gene3D G3DSA:1.10.40.60 107 214 3.0E-31 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 Pfam PF03934 Type II secretion system (T2SS), protein K 30 307 8.0E-87 T 26-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 PANTHER PTHR21180 2 258 2.2E-44 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 Gene3D G3DSA:3.30.1300.30 276 315 9.2E-15 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 Gene3D G3DSA:3.30.1300.30 29 105 9.2E-15 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 SUPERFAMILY SSF54523 275 314 2.04E-17 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 SUPERFAMILY SSF54523 38 107 2.04E-17 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 PIRSF PIRSF002786 1 316 5.9E-76 T 26-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 SUPERFAMILY SSF158544 108 214 1.7E-25 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 SUPERFAMILY SSF47781 202 256 8.23E-6 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 Gene3D G3DSA:1.10.40.60 217 260 1.3E-7 T 26-04-2016 PAM18_RS09580 9f47338b0fca0fdf5a27fa60ae28c907 333 PANTHER PTHR21180:SF32 2 258 2.2E-44 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 SUPERFAMILY SSF56935 50 742 2.23E-130 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 PANTHER PTHR30069 40 289 0.0 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 PANTHER PTHR30069 346 633 0.0 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 2.5E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 PANTHER PTHR30069:SF8 40 289 0.0 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 PANTHER PTHR30069:SF8 346 633 0.0 T 26-04-2016 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 Gene3D G3DSA:2.40.170.20 182 742 1.5E-117 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 Gene3D G3DSA:2.170.130.10 64 181 5.1E-39 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 Pfam PF00593 TonB dependent receptor 472 740 5.4E-34 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 742 2.7E-87 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS20970 02b840c4ebd30480917834d2a9c9cd2b 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 Pfam PF13437 HlyD family secretion protein 200 280 1.1E-7 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 Gene3D G3DSA:2.40.50.100 45 77 8.0E-16 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 Gene3D G3DSA:2.40.50.100 197 230 8.0E-16 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 SUPERFAMILY SSF111369 180 247 4.97E-5 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 Pfam PF13533 Biotin-lipoyl like 43 88 1.4E-13 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 PANTHER PTHR30367 4 352 9.7E-240 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 SUPERFAMILY SSF111369 125 165 3.4E-11 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 SUPERFAMILY SSF111369 44 96 3.4E-11 T 26-04-2016 PAM18_RS08250 7a54e575862357840b667d3a31e83671 352 PANTHER PTHR30367:SF6 4 352 9.7E-240 T 26-04-2016 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 136 3.1E-33 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 PANTHER PTHR11695 19 342 4.1E-145 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 Pfam PF00107 Zinc-binding dehydrogenase 181 304 1.7E-28 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 SMART SM00829 16 340 7.7E-6 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 SUPERFAMILY SSF51735 145 310 1.07E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 Gene3D G3DSA:3.90.180.10 2 174 1.6E-69 T 26-04-2016 IPR011032 GroES-like PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 PANTHER PTHR11695:SF280 19 342 4.1E-145 T 26-04-2016 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 Gene3D G3DSA:3.40.50.720 175 290 9.2E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 SUPERFAMILY SSF50129 312 340 2.74E-58 T 26-04-2016 IPR011032 GroES-like PAM18_RS28355 6e80ac6f02efd59ea9ec0c886bce5f49 342 SUPERFAMILY SSF50129 2 148 2.74E-58 T 26-04-2016 IPR011032 GroES-like PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 Gene3D G3DSA:2.60.120.10 1 92 1.3E-39 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 3.8E-37 T 26-04-2016 IPR009664 Protein of unknown function DUF1255 PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 PANTHER PTHR36540 1 93 2.5E-48 T 26-04-2016 PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 25.887 T 26-04-2016 IPR009664 Protein of unknown function DUF1255 PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 PANTHER PTHR36540:SF1 1 93 2.5E-48 T 26-04-2016 PAM18_RS17800 a08d8d99a1a0c71a780c75428c6a9de1 93 SUPERFAMILY SSF51182 1 92 2.14E-36 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PANTHER PTHR24423 39 728 0.0 T 26-04-2016 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Pfam PF01590 GAF domain 142 290 1.4E-18 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SMART SM00065 139 313 6.5E-10 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PANTHER PTHR24423:SF540 39 728 0.0 T 26-04-2016 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 718 6.9E-13 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Pfam PF00360 Phytochrome region 324 496 1.5E-47 T 26-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SMART SM00387 610 721 3.4E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SUPERFAMILY SSF55781 311 493 4.51E-42 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SMART SM00388 503 566 1.2E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SUPERFAMILY SSF55781 128 307 2.55E-60 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PRINTS PR01033 Phytochrome signature 339 359 2.1E-22 T 26-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PRINTS PR01033 Phytochrome signature 456 474 2.1E-22 T 26-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PRINTS PR01033 Phytochrome signature 154 173 2.1E-22 T 26-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PRINTS PR01033 Phytochrome signature 241 262 2.1E-22 T 26-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 PRINTS PR01033 Phytochrome signature 422 441 2.1E-22 T 26-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 566 1.3E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SUPERFAMILY SSF47384 494 566 5.49E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Pfam PF08446 PAS fold 12 76 1.0E-10 T 26-04-2016 IPR013654 PAS fold-2 GO:0006355 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SUPERFAMILY SSF55785 6 115 1.62E-25 T 26-04-2016 IPR000014 PAS domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Gene3D G3DSA:1.10.287.130 496 551 9.2E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Gene3D G3DSA:3.30.565.10 552 722 1.7E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 SUPERFAMILY SSF55874 556 721 1.83E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04185 243812063695218f0f762ac0cf8c6a1a 728 Gene3D G3DSA:3.30.450.40 128 281 1.5E-10 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 PANTHER PTHR11803 1 126 7.2E-53 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 SUPERFAMILY SSF55298 1 125 3.93E-46 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 4.9E-43 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 PANTHER PTHR11803:SF13 1 126 7.2E-53 T 26-04-2016 PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 2.3E-53 T 26-04-2016 IPR006056 RidA family PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 26-04-2016 IPR019897 RidA, conserved site PAM18_RS27890 a9a48ce641746a8bdcf84bed6c2c4408 126 Gene3D G3DSA:3.30.1330.40 5 125 3.0E-49 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS20590 3e14dc6fedef62a54ad8a7c02b139d94 299 PANTHER PTHR22916 1 296 2.1E-98 T 26-04-2016 PAM18_RS20590 3e14dc6fedef62a54ad8a7c02b139d94 299 Pfam PF00535 Glycosyl transferase family 2 6 123 4.9E-25 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS20590 3e14dc6fedef62a54ad8a7c02b139d94 299 SUPERFAMILY SSF53448 3 221 6.75E-50 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS20590 3e14dc6fedef62a54ad8a7c02b139d94 299 PANTHER PTHR22916:SF17 1 296 2.1E-98 T 26-04-2016 PAM18_RS20590 3e14dc6fedef62a54ad8a7c02b139d94 299 Gene3D G3DSA:3.90.550.10 3 228 2.1E-47 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS01015 d5f7655ec3c83af5fcc134e36f8cafe1 70 Pfam PF11278 Protein of unknown function (DUF3079) 1 49 7.2E-34 T 26-04-2016 IPR021430 Protein of unknown function DUF3079 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 PANTHER PTHR32481 7 360 4.8E-201 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF53187 13 88 1.37E-44 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF53187 182 348 1.37E-44 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF101821 78 190 1.1E-24 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 Pfam PF05343 M42 glutamyl aminopeptidase 53 341 8.7E-74 T 26-04-2016 IPR008007 Peptidase M42 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:2.40.30.40 78 173 1.6E-24 T 26-04-2016 IPR023367 Peptidase M42, domain 2 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 8 349 1.8E-171 T 26-04-2016 IPR017537 Peptidase M42, hydrolase PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:3.40.630.10 174 348 1.4E-49 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:3.40.630.10 12 77 1.4E-49 T 26-04-2016 PAM18_RS07735 0678df4490dc2a64903bf5d86c525e69 398 PANTHER PTHR32481:SF7 7 360 4.8E-201 T 26-04-2016 PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 155 7.5E-17 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 Gene3D G3DSA:3.10.129.10 13 155 2.7E-33 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 SUPERFAMILY SSF54637 7 155 1.87E-29 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 Pfam PF03061 Thioesterase superfamily 58 148 9.3E-19 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 PANTHER PTHR12418 6 155 6.3E-71 T 26-04-2016 PAM18_RS27420 b9f65335284a2d0c5a03bf18f76b5aac 157 PANTHER PTHR12418:SF35 6 155 6.3E-71 T 26-04-2016 PAM18_RS04645 c95669093205606346b027755afda3a3 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 245 6.6E-17 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS04645 c95669093205606346b027755afda3a3 297 PANTHER PTHR35936 1 258 9.6E-108 T 26-04-2016 PAM18_RS04645 c95669093205606346b027755afda3a3 297 SUPERFAMILY SSF53850 27 245 6.42E-35 T 26-04-2016 PAM18_RS04645 c95669093205606346b027755afda3a3 297 Gene3D G3DSA:3.40.190.10 23 142 2.3E-7 T 26-04-2016 PAM18_RS04645 c95669093205606346b027755afda3a3 297 PANTHER PTHR35936:SF3 1 258 9.6E-108 T 26-04-2016 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 SMART SM00448 1 114 2.5E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.3E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.3E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.3E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 Gene3D G3DSA:1.10.10.10 119 208 8.7E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 PANTHER PTHR26402:SF570 1 210 2.7E-61 T 26-04-2016 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 SMART SM00421 145 202 3.6E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 Gene3D G3DSA:3.40.50.2300 1 118 2.8E-34 T 26-04-2016 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 SUPERFAMILY SSF46894 142 208 1.12E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.7E-14 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 Pfam PF00072 Response regulator receiver domain 3 115 6.1E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 PANTHER PTHR26402 1 210 2.7E-61 T 26-04-2016 PAM18_RS15710 70bfb6a2a578c25934189d564c5b352b 225 SUPERFAMILY SSF52172 1 129 4.55E-34 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 315 2.3E-117 T 26-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 PANTHER PTHR30024 3 317 9.6E-124 T 26-04-2016 PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 SUPERFAMILY SSF53850 26 317 2.32E-75 T 26-04-2016 PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 116 247 6.4E-38 T 26-04-2016 PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 PANTHER PTHR30024:SF5 3 317 9.6E-124 T 26-04-2016 PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 Pfam PF16868 NMT1-like family 31 315 8.4E-97 T 26-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 26 107 6.7E-54 T 26-04-2016 PAM18_RS28960 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 248 316 6.7E-54 T 26-04-2016 PAM18_RS22995 f889acbf6b86213a0f3d0ea2afcd3efd 287 PANTHER PTHR35851 2 287 1.1E-81 T 26-04-2016 PAM18_RS22995 f889acbf6b86213a0f3d0ea2afcd3efd 287 PANTHER PTHR35851:SF1 2 287 1.1E-81 T 26-04-2016 PAM18_RS22995 f889acbf6b86213a0f3d0ea2afcd3efd 287 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 46 270 25.096 T 26-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 PAM18_RS22995 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF03799 Cell division protein FtsQ 149 262 7.5E-23 T 26-04-2016 IPR005548 Cell division protein FtsQ/DivIB PAM18_RS22995 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF08478 POTRA domain, FtsQ-type 77 145 5.6E-18 T 26-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type PAM18_RS04530 ba2555bec69eebda6223b934024caec2 171 PANTHER PTHR36305 8 168 1.2E-71 T 26-04-2016 PAM18_RS04530 ba2555bec69eebda6223b934024caec2 171 SUPERFAMILY SSF101307 17 162 3.66E-46 T 26-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PAM18_RS04530 ba2555bec69eebda6223b934024caec2 171 PIRSF PIRSF006162 14 169 2.0E-50 T 26-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 PAM18_RS04530 ba2555bec69eebda6223b934024caec2 171 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 1.9E-52 T 26-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 PAM18_RS04020 d2edbf89e71f49bb2773ed32f9369425 324 Pfam PF00676 Dehydrogenase E1 component 16 312 4.9E-98 T 26-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PAM18_RS04020 d2edbf89e71f49bb2773ed32f9369425 324 SUPERFAMILY SSF52518 4 324 7.86E-102 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04020 d2edbf89e71f49bb2773ed32f9369425 324 Gene3D G3DSA:3.40.50.970 2 323 1.1E-127 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04020 d2edbf89e71f49bb2773ed32f9369425 324 PANTHER PTHR11516:SF25 1 323 1.6E-148 T 26-04-2016 PAM18_RS04020 d2edbf89e71f49bb2773ed32f9369425 324 PANTHER PTHR11516 1 323 1.6E-148 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 SUPERFAMILY SSF55031 187 296 2.39E-29 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Gene3D G3DSA:3.40.630.10 11 195 7.4E-71 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Gene3D G3DSA:3.40.630.10 324 382 7.4E-71 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Pfam PF01546 Peptidase family M20/M25/M40 69 379 1.7E-41 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 PANTHER PTHR11014:SF106 10 382 5.0E-95 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 12 381 2.6E-161 T 26-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Gene3D G3DSA:3.30.70.360 196 296 4.7E-35 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 26-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Pfam PF07687 Peptidase dimerisation domain 183 289 7.9E-27 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 SUPERFAMILY SSF53187 300 382 8.64E-65 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 SUPERFAMILY SSF53187 9 186 8.64E-65 T 26-04-2016 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 9 383 51.791 T 26-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 PAM18_RS19780 8437d6c250e34699ef2f082e04b8bbe8 383 PANTHER PTHR11014 10 382 5.0E-95 T 26-04-2016 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Pfam PF00034 Cytochrome c 47 146 1.9E-5 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Gene3D G3DSA:1.10.760.10 189 296 4.9E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Gene3D G3DSA:1.10.760.10 44 146 3.7E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 SUPERFAMILY SSF46626 190 296 1.4E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 PANTHER PTHR35008 6 433 7.7E-303 T 26-04-2016 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 PANTHER PTHR35008:SF2 6 433 7.7E-303 T 26-04-2016 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 SUPERFAMILY SSF46626 38 168 1.28E-22 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Gene3D G3DSA:1.10.760.10 327 414 3.8E-14 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 SUPERFAMILY SSF46626 327 419 2.91E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 193 294 1.3E-4 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 327 407 9.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS17665 96158a7f238db4c531ec3f30c905b30e 433 PIRSF PIRSF000018 15 433 3.4E-137 T 26-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 Pfam PF00593 TonB dependent receptor 407 649 5.5E-39 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 Gene3D G3DSA:2.40.170.20 163 653 4.1E-112 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 PANTHER PTHR30069 28 600 1.6E-122 T 26-04-2016 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 PANTHER PTHR30069:SF2 28 600 1.6E-122 T 26-04-2016 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 Gene3D G3DSA:2.170.130.10 31 162 6.5E-40 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 SUPERFAMILY SSF56935 37 653 3.66E-127 T 26-04-2016 PAM18_RS15980 eef44475fc844fde7623600de52bf77f 653 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 158 4.0E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS19715 11bc2c1ac1f3055e977e590ad83e308e 109 Pfam PF03927 NapD protein 6 78 1.5E-25 T 26-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly PAM18_RS19715 11bc2c1ac1f3055e977e590ad83e308e 109 PANTHER PTHR38603 1 100 6.2E-38 T 26-04-2016 PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 SUPERFAMILY SSF51735 7 244 4.81E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 6.9E-61 T 26-04-2016 PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PANTHER PTHR24322 153 185 5.4E-81 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PANTHER PTHR24322 10 137 5.4E-81 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 Gene3D G3DSA:3.40.50.720 7 244 9.1E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PANTHER PTHR24322:SF620 153 185 5.4E-81 T 26-04-2016 PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PANTHER PTHR24322:SF620 10 137 5.4E-81 T 26-04-2016 PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18735 4e1dec5e45fe5488de4c59193ce9209a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22810 36d41f617db1bb3e4f6e7fe45f41ad57 364 Pfam PF07433 Protein of unknown function (DUF1513) 60 363 6.8E-113 T 26-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 PAM18_RS22810 36d41f617db1bb3e4f6e7fe45f41ad57 364 PIRSF PIRSF028101 1 364 1.1E-157 T 26-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 PAM18_RS22810 36d41f617db1bb3e4f6e7fe45f41ad57 364 Gene3D G3DSA:2.130.10.10 64 343 3.2E-15 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS22810 36d41f617db1bb3e4f6e7fe45f41ad57 364 SUPERFAMILY SSF50969 52 347 2.51E-21 T 26-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 PANTHER PTHR30163:SF0 1 334 2.0E-191 T 26-04-2016 PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 328 6.3E-119 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 SUPERFAMILY SSF53955 26 330 4.87E-96 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 Gene3D G3DSA:1.10.530.10 79 135 1.2E-57 T 26-04-2016 PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 Gene3D G3DSA:1.10.530.10 217 332 1.2E-57 T 26-04-2016 PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 Pfam PF13406 Transglycosylase SLT domain 36 326 1.4E-101 T 26-04-2016 IPR031304 Transglycosylase SLT domain 2 PAM18_RS04775 f50114414d0c89f8954bf2a3903906f5 336 PANTHER PTHR30163 1 334 2.0E-191 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 SUPERFAMILY SSF56935 67 719 1.05E-94 T 26-04-2016 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 PANTHER PTHR32552 1 719 0.0 T 26-04-2016 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 Gene3D G3DSA:2.170.130.10 78 177 4.2E-15 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 Gene3D G3DSA:2.40.170.20 178 719 3.8E-80 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 177 2.8E-12 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 PANTHER PTHR32552:SF12 1 719 0.0 T 26-04-2016 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 Pfam PF00593 TonB dependent receptor 461 717 4.9E-31 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS05825 bc5e41906b3de375e2a827dea002c3cf 719 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 78 719 0.0 T 26-04-2016 IPR010100 TonB-dependent copper receptor PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 80 189 4.1E-18 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.0E-13 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 Gene3D G3DSA:1.10.357.10 7 190 4.2E-37 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 PANTHER PTHR30055:SF46 1 194 1.2E-96 T 26-04-2016 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.7E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.7E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 SUPERFAMILY SSF48498 80 191 4.45E-21 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 SUPERFAMILY SSF46689 3 75 1.28E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21455 3b7ab75670e3680419082cb315acf610 196 PANTHER PTHR30055 1 194 1.2E-96 T 26-04-2016 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 79 741 2.7E-229 T 26-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 PANTHER PTHR23355 6 822 4.6E-292 T 26-04-2016 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SUPERFAMILY SSF50249 142 239 6.43E-18 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SMART SM00955 264 598 1.5E-187 T 26-04-2016 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Pfam PF08461 Ribonuclease R winged-helix domain 27 81 4.5E-8 T 26-04-2016 IPR013668 Ribonuclease R winged-helix domain PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 PANTHER PTHR23355:SF9 6 822 4.6E-292 T 26-04-2016 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SMART SM00357 90 149 5.1E-12 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Hamap MF_01895 Ribonuclease R [rnr]. 42 742 57.087 T 26-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SUPERFAMILY SSF50249 71 151 1.5E-17 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SMART SM00316 659 742 3.9E-11 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SUPERFAMILY SSF50249 661 741 2.46E-20 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Gene3D G3DSA:2.40.50.140 661 741 5.8E-18 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Pfam PF08206 Ribonuclease B OB domain 91 148 5.8E-22 T 26-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 SUPERFAMILY SSF50249 224 658 2.23E-146 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Pfam PF00773 RNB domain 264 597 6.9E-110 T 26-04-2016 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 742 7.2E-262 T 26-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 ProSitePatterns PS01175 Ribonuclease II family signature. 565 589 - T 26-04-2016 IPR022966 Ribonuclease II/R, conserved site PAM18_RS25830 de7e5168b41a8447578688bf5f9dcadd 904 Pfam PF00575 S1 RNA binding domain 659 740 6.7E-11 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 Gene3D G3DSA:1.10.3720.10 120 342 4.2E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 5.0E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 PANTHER PTHR30465:SF66 63 352 1.4E-203 T 26-04-2016 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 PANTHER PTHR30465:SF66 1 45 1.4E-203 T 26-04-2016 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 PANTHER PTHR30465 63 352 1.4E-203 T 26-04-2016 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 PANTHER PTHR30465 1 45 1.4E-203 T 26-04-2016 PAM18_RS15310 4c24a46c44a24c1233a76e2a191fc69e 357 SUPERFAMILY SSF161098 120 339 4.06E-13 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 519 2.6E-118 T 26-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 PANTHER PTHR11772:SF10 432 561 1.4E-224 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 PANTHER PTHR11772:SF10 2 390 1.4E-224 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 586 0.0 T 26-04-2016 IPR017535 Asparagine synthase family amidotransferase PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.60.20.10 1 224 2.1E-67 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 PIRSF PIRSF001589 1 589 9.7E-205 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF13537 Glutamine amidotransferase domain 47 166 3.1E-43 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF00733 Asparagine synthase 246 584 3.7E-80 T 26-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF56235 1 224 2.74E-60 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF52402 441 562 9.04E-72 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF52402 234 388 9.04E-72 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.40.50.620 437 584 3.5E-79 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.40.50.620 225 385 3.5E-79 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 PANTHER PTHR11772 432 561 1.4E-224 T 26-04-2016 PAM18_RS07745 a07aa27091b66e6bc2cc2096c1af2a99 589 PANTHER PTHR11772 2 390 1.4E-224 T 26-04-2016 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 SUPERFAMILY SSF46626 13 99 1.73E-21 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 SUPERFAMILY SSF46626 105 200 5.67E-21 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 PANTHER PTHR33751:SF3 1 201 6.2E-70 T 26-04-2016 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 PIRSF PIRSF000005 1 201 3.2E-62 T 26-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Pfam PF00034 Cytochrome c 27 100 1.2E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Pfam PF00034 Cytochrome c 112 199 1.2E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Gene3D G3DSA:1.10.760.10 21 100 1.0E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Gene3D G3DSA:1.10.760.10 108 201 3.1E-28 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS28680 95eaa55a04ef0dcc2ea73a45f4c8535f 201 PANTHER PTHR33751 1 201 6.2E-70 T 26-04-2016 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 112 7.2E-12 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 Gene3D G3DSA:1.20.140.10 210 393 4.9E-58 T 26-04-2016 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 PANTHER PTHR10909:SF275 8 378 7.2E-206 T 26-04-2016 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 Gene3D G3DSA:2.40.110.10 128 209 1.1E-15 T 26-04-2016 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 234 369 1.3E-16 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 SUPERFAMILY SSF56645 5 215 1.01E-41 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 Gene3D G3DSA:1.10.540.10 4 110 2.3E-32 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 SUPERFAMILY SSF47203 234 390 1.1E-19 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 PIRSF PIRSF016578 1 392 3.2E-30 T 26-04-2016 PAM18_RS13815 dbd9f172c31700a635fce846f0d9200b 394 PANTHER PTHR10909 8 378 7.2E-206 T 26-04-2016 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF07702 UTRA domain 92 230 9.8E-38 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PANTHER PTHR11751 120 143 4.4E-41 T 26-04-2016 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PANTHER PTHR11751 1 73 4.4E-41 T 26-04-2016 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.4E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:3.40.1410.10 67 236 3.0E-43 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF64288 59 235 5.81E-41 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PANTHER PTHR11751:SF333 120 143 4.4E-41 T 26-04-2016 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PANTHER PTHR11751:SF333 1 73 4.4E-41 T 26-04-2016 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00345 12 71 3.3E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00866 92 231 1.9E-29 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.2E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.2E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF46785 5 78 8.65E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08835 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:1.10.10.10 4 66 5.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 Gene3D G3DSA:1.10.10.10 2 80 2.2E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 Gene3D G3DSA:3.40.190.10 187 243 5.6E-13 T 26-04-2016 PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 PANTHER PTHR30126:SF31 1 281 1.5E-104 T 26-04-2016 PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 Pfam PF03466 LysR substrate binding domain 85 281 1.2E-42 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 SUPERFAMILY SSF53850 86 281 4.34E-37 T 26-04-2016 PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.8E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 SUPERFAMILY SSF46785 3 109 5.05E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 PANTHER PTHR30126 1 281 1.5E-104 T 26-04-2016 PAM18_RS22105 c32aadf10faf8a084a75f2114232c677 284 Gene3D G3DSA:3.40.190.10 87 186 4.6E-20 T 26-04-2016 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 PANTHER PTHR30386 218 342 2.4E-17 T 26-04-2016 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 Pfam PF07238 PilZ domain 16 115 1.7E-11 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 Gene3D G3DSA:2.40.10.220 17 116 1.2E-8 T 26-04-2016 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 Pfam PF13437 HlyD family secretion protein 262 357 3.5E-10 T 26-04-2016 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 SUPERFAMILY SSF141371 10 124 2.35E-10 T 26-04-2016 PAM18_RS07435 a72176d4adce9fd48f50e48c31eb2d7f 389 Gene3D G3DSA:2.40.50.100 200 291 7.1E-5 T 26-04-2016 PAM18_RS08710 0c4a6567fc77bbc3d6e7166845c91d59 189 Pfam PF13302 Acetyltransferase (GNAT) domain 14 146 4.0E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS08710 0c4a6567fc77bbc3d6e7166845c91d59 189 Gene3D G3DSA:3.40.630.30 3 186 1.6E-52 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08710 0c4a6567fc77bbc3d6e7166845c91d59 189 SUPERFAMILY SSF55729 5 172 1.35E-30 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08710 0c4a6567fc77bbc3d6e7166845c91d59 189 PANTHER PTHR13256:SF20 1 184 1.1E-73 T 26-04-2016 PAM18_RS08710 0c4a6567fc77bbc3d6e7166845c91d59 189 PANTHER PTHR13256 1 184 1.1E-73 T 26-04-2016 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 245 4.2E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PANTHER PTHR24423 62 396 4.8E-91 T 26-04-2016 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Gene3D G3DSA:1.10.287.130 176 243 7.3E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SMART SM00388 181 247 3.0E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SUPERFAMILY SSF55874 251 394 1.31E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SMART SM00387 287 393 3.8E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Gene3D G3DSA:3.30.450.20 69 134 3.1E-9 T 26-04-2016 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Pfam PF13188 PAS domain 76 130 3.2E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 391 1.4E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SUPERFAMILY SSF55785 75 153 4.01E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.5E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 1.5E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 390 1.5E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.5E-15 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SUPERFAMILY SSF47384 175 245 2.75E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 SMART SM00091 75 138 3.2E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 PANTHER PTHR24423:SF554 62 396 4.8E-91 T 26-04-2016 PAM18_RS20100 aab449309f51ac292cc1ed4ea80f8023 402 Gene3D G3DSA:3.30.565.10 263 391 3.5E-33 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF13710 ACT domain 12 72 3.1E-15 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.1150 83 161 9.4E-30 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.5E-26 T 26-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 PANTHER PTHR30239 1 162 8.7E-91 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.6E-63 T 26-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 1 75 2.45E-21 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-37 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 79 162 2.29E-26 T 26-04-2016 PAM18_RS24590 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.260 1 78 7.9E-35 T 26-04-2016 PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 SUPERFAMILY SSF52540 8 266 1.47E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 218 1.5E-25 T 26-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 PANTHER PTHR13696:SF3 1 259 8.8E-123 T 26-04-2016 PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 Gene3D G3DSA:3.40.50.300 9 268 5.6E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 PANTHER PTHR13696 1 259 8.8E-123 T 26-04-2016 PAM18_RS18815 8752be372a06b409e99c9e0dd3e8ef8b 277 PIRSF PIRSF003092 3 270 1.0E-82 T 26-04-2016 IPR025501 ATP binding protein MinD PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Gene3D G3DSA:3.50.50.60 7 177 5.2E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Gene3D G3DSA:3.50.50.60 268 349 5.2E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PANTHER PTHR13789 1 378 4.7E-201 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 SUPERFAMILY SSF51905 6 172 5.18E-60 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 SUPERFAMILY SSF51905 268 371 5.18E-60 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PANTHER PTHR13789:SF212 1 378 4.7E-201 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.3E-15 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.3E-15 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.3E-15 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.3E-15 T 26-04-2016 PAM18_RS08410 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Pfam PF01494 FAD binding domain 7 343 2.2E-24 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 446 669 6.3E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM01086 658 748 3.0E-33 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 356 439 5.5E-30 T 26-04-2016 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 739 2.9E-25 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.3E-16 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 740 0.0 T 26-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 175 355 8.4E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PANTHER PTHR11638 1 757 0.0 T 26-04-2016 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.1780.10 1 142 6.8E-44 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PANTHER PTHR11638:SF111 1 757 0.0 T 26-04-2016 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 442 744 1.52E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 1.1E-37 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 1.1E-37 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 1.1E-37 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 1.1E-37 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 492 659 1.6E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 211 356 5.4E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 652 3.0E-49 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 328 4.5E-12 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 670 752 2.4E-31 T 26-04-2016 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF81923 1 142 5.1E-61 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS12095 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 173 427 9.68E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Gene3D G3DSA:2.40.170.20 174 694 1.0E-78 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Pfam PF00593 TonB dependent receptor 445 691 1.1E-23 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Gene3D G3DSA:2.170.130.10 34 173 5.6E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 PANTHER PTHR32552 1 694 0.0 T 26-04-2016 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 171 1.3E-11 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 PANTHER PTHR32552:SF24 1 694 0.0 T 26-04-2016 IPR030150 TonB-dependent siderophore receptor ViuA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PAM18_RS03990 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 SUPERFAMILY SSF56935 33 694 6.41E-107 T 26-04-2016 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF47413 3 61 2.49E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 PANTHER PTHR40661 16 237 2.5E-34 T 26-04-2016 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF01381 Helix-turn-helix 7 60 9.5E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SMART SM00530 6 60 3.3E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:1.10.260.40 3 67 3.2E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF51306 101 233 6.54E-22 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:2.10.109.10 131 232 3.5E-15 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS21100 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF00717 Peptidase S24-like 148 214 2.6E-12 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS21290 d07aa676f487e0816ac013c933847283 118 Gene3D G3DSA:3.30.1360.20 12 112 5.6E-32 T 26-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PAM18_RS21290 d07aa676f487e0816ac013c933847283 118 SUPERFAMILY SSF55248 16 112 1.7E-33 T 26-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PAM18_RS21290 d07aa676f487e0816ac013c933847283 118 PANTHER PTHR12599 3 112 1.5E-35 T 26-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PAM18_RS21290 d07aa676f487e0816ac013c933847283 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 19 110 2.6E-29 T 26-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PAM18_RS21290 d07aa676f487e0816ac013c933847283 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.135 T 26-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PANTHER PTHR30386 17 118 2.5E-182 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PANTHER PTHR30386 154 443 2.5E-182 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PANTHER PTHR30386:SF3 17 118 2.5E-182 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PANTHER PTHR30386:SF3 154 443 2.5E-182 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 387 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 364 1.2E-65 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 SUPERFAMILY SSF111369 266 346 4.71E-5 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 399 7.9E-19 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 Gene3D G3DSA:2.40.50.100 66 97 5.5E-16 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 Gene3D G3DSA:2.40.50.100 292 326 5.5E-16 T 26-04-2016 PAM18_RS08020 1bb3177c7f805d6ce5e57071124521ea 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 22 443 3.0E-142 T 26-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 PAM18_RS21990 09962757be0d643061a8d179182744de 230 PANTHER PTHR21600:SF19 1 227 2.0E-64 T 26-04-2016 PAM18_RS21990 09962757be0d643061a8d179182744de 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS21990 09962757be0d643061a8d179182744de 230 SMART SM00363 1 58 9.4E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS21990 09962757be0d643061a8d179182744de 230 SUPERFAMILY SSF55174 1 91 3.93E-14 T 26-04-2016 PAM18_RS21990 09962757be0d643061a8d179182744de 230 Pfam PF01479 S4 domain 1 42 3.3E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS21990 09962757be0d643061a8d179182744de 230 Pfam PF00849 RNA pseudouridylate synthase 62 190 2.7E-12 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS21990 09962757be0d643061a8d179182744de 230 SUPERFAMILY SSF55120 61 227 5.44E-43 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS21990 09962757be0d643061a8d179182744de 230 Gene3D G3DSA:3.10.290.10 1 62 1.3E-16 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS21990 09962757be0d643061a8d179182744de 230 PANTHER PTHR21600 1 227 2.0E-64 T 26-04-2016 PAM18_RS21990 09962757be0d643061a8d179182744de 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 7.6E-41 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PANTHER PTHR24322 15 130 2.0E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PANTHER PTHR24322 146 178 2.0E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PANTHER PTHR24322:SF649 15 130 2.0E-48 T 26-04-2016 PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PANTHER PTHR24322:SF649 146 178 2.0E-48 T 26-04-2016 PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.2E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 238 1.5E-57 T 26-04-2016 PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 Gene3D G3DSA:3.40.50.720 9 240 2.9E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 SUPERFAMILY SSF51735 10 239 3.25E-72 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04290 6d61a17e115da725efe65781f77971eb 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS04145 ae27e42a67db6db51a2ddbca37c0a94f 130 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 122 1.8E-25 T 26-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 PAM18_RS04145 ae27e42a67db6db51a2ddbca37c0a94f 130 SUPERFAMILY SSF55331 2 125 2.43E-43 T 26-04-2016 IPR014347 Tautomerase/MIF superfamily PAM18_RS04145 ae27e42a67db6db51a2ddbca37c0a94f 130 Gene3D G3DSA:3.30.429.10 1 125 1.1E-47 T 26-04-2016 PAM18_RS04145 ae27e42a67db6db51a2ddbca37c0a94f 130 PANTHER PTHR37950:SF1 2 130 1.0E-49 T 26-04-2016 PAM18_RS04145 ae27e42a67db6db51a2ddbca37c0a94f 130 PANTHER PTHR37950 2 130 1.0E-49 T 26-04-2016 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.470.20 204 444 6.0E-97 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.1490.20 130 203 1.6E-28 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF56059 83 346 3.01E-69 T 26-04-2016 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-44 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF51246 331 444 3.92E-42 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM01209 114 292 0.007 T 26-04-2016 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 5.1E-87 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.6E-228 T 26-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.2E-38 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF52440 1 113 1.87E-46 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 PANTHER PTHR18866 1 442 1.7E-292 T 26-04-2016 PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM00878 336 441 1.6E-63 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.40.50.20 1 129 1.2E-51 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS25385 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS11715 2a0a527696c2ec8817989b3be5885bb2 166 Gene3D G3DSA:3.10.129.10 7 151 1.0E-55 T 26-04-2016 IPR029069 HotDog domain PAM18_RS11715 2a0a527696c2ec8817989b3be5885bb2 166 Pfam PF03061 Thioesterase superfamily 23 95 5.4E-18 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS11715 2a0a527696c2ec8817989b3be5885bb2 166 PANTHER PTHR11049 7 158 5.3E-72 T 26-04-2016 PAM18_RS11715 2a0a527696c2ec8817989b3be5885bb2 166 SUPERFAMILY SSF54637 5 156 9.1E-45 T 26-04-2016 IPR029069 HotDog domain PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 446 31.882 T 26-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 Gene3D G3DSA:2.40.50.140 53 113 2.1E-4 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 PANTHER PTHR30008 8 458 8.5E-179 T 26-04-2016 PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 360 1.7E-131 T 26-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 Pfam PF02601 Exonuclease VII, large subunit 132 443 5.6E-100 T 26-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 Pfam PF13742 OB-fold nucleic acid binding domain 16 108 2.7E-28 T 26-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PAM18_RS05895 bc97d9ff6d041f596b3e6133b77d6ea9 459 PANTHER PTHR30008:SF0 8 458 8.5E-179 T 26-04-2016 PAM18_RS09075 5c56ffaa6b88100368b405a0d30e7659 195 Pfam PF04279 Intracellular septation protein A 1 185 1.7E-60 T 26-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PAM18_RS09075 5c56ffaa6b88100368b405a0d30e7659 195 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 186 2.2E-52 T 26-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PAM18_RS09075 5c56ffaa6b88100368b405a0d30e7659 195 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 187 17.597 T 26-04-2016 IPR006008 Intracellular septation protein A GO:0016021 PAM18_RS09075 5c56ffaa6b88100368b405a0d30e7659 195 PANTHER PTHR36917 1 195 9.7E-74 T 26-04-2016 PAM18_RS09075 5c56ffaa6b88100368b405a0d30e7659 195 PANTHER PTHR36917:SF1 1 195 9.7E-74 T 26-04-2016 PAM18_RS03070 9f65953eaca82a83130e5db24e5d08ff 276 PANTHER PTHR30193 10 274 1.4E-98 T 26-04-2016 PAM18_RS03070 9f65953eaca82a83130e5db24e5d08ff 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 3.5E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03070 9f65953eaca82a83130e5db24e5d08ff 276 PANTHER PTHR30193:SF20 10 274 1.4E-98 T 26-04-2016 PAM18_RS03070 9f65953eaca82a83130e5db24e5d08ff 276 SUPERFAMILY SSF161098 11 267 3.08E-59 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03070 9f65953eaca82a83130e5db24e5d08ff 276 Gene3D G3DSA:1.10.3720.10 17 268 1.4E-59 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09820 8161027cbe1f72041dbf2b1510093ce1 70 Gene3D G3DSA:1.10.10.620 1 65 6.0E-30 T 26-04-2016 IPR023200 Ribosome modulation factor-like domain PAM18_RS09820 8161027cbe1f72041dbf2b1510093ce1 70 Pfam PF04957 Ribosome modulation factor 1 54 7.1E-27 T 26-04-2016 IPR007040 Ribosome modulation factor PAM18_RS09820 8161027cbe1f72041dbf2b1510093ce1 70 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 50 2.0E-23 T 26-04-2016 IPR007040 Ribosome modulation factor PAM18_RS09820 8161027cbe1f72041dbf2b1510093ce1 70 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.689 T 26-04-2016 IPR007040 Ribosome modulation factor PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282 417 608 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282 657 820 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282 1 310 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 SUPERFAMILY SSF56601 418 606 4.13E-130 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 SUPERFAMILY SSF56601 211 233 4.13E-130 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 SUPERFAMILY SSF56601 262 313 4.13E-130 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 SUPERFAMILY SSF56601 657 801 4.13E-130 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 751 5.7E-188 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Gene3D G3DSA:1.10.3810.10 55 232 1.4E-73 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Pfam PF00912 Transglycosylase 55 229 3.7E-65 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Gene3D G3DSA:3.40.710.10 658 799 5.3E-137 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Gene3D G3DSA:3.40.710.10 418 607 5.3E-137 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Gene3D G3DSA:3.40.710.10 233 313 5.3E-137 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 741 1.8E-31 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Pfam PF17092 Penicillin-binding protein OB-like domain 316 421 4.5E-25 T 26-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 Gene3D G3DSA:2.40.50.140 342 417 9.5E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282:SF5 417 608 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282:SF5 657 820 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 PANTHER PTHR32282:SF5 1 310 7.5E-283 T 26-04-2016 PAM18_RS26390 7f06c8b0b0ce423dd32f1c83ea39fefc 822 SUPERFAMILY SSF53955 43 255 9.84E-78 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS00505 f4f82af9ca72b8ce6adeacbe55337108 386 Pfam PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 226 343 1.4E-42 T 26-04-2016 IPR028917 Tox-GHH2 domain PAM18_RS00505 f4f82af9ca72b8ce6adeacbe55337108 386 Pfam PF13665 Domain of unknown function (DUF4150) 21 134 4.4E-36 T 26-04-2016 IPR025425 Domain of unknown function DUF4150 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 SUPERFAMILY SSF56037 337 434 1.15E-18 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 SMART SM00977 364 432 2.1E-19 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 Gene3D G3DSA:3.40.50.620 18 179 1.1E-11 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 SUPERFAMILY SSF52402 17 232 3.09E-61 T 26-04-2016 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 Pfam PF01171 PP-loop family 23 199 2.0E-58 T 26-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 PANTHER PTHR11807:SF2 25 426 1.1E-87 T 26-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 Pfam PF09179 TilS substrate binding domain 260 323 2.6E-13 T 26-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 396 22.998 T 26-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 203 1.4E-51 T 26-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 Pfam PF11734 TilS substrate C-terminal domain 364 432 1.4E-16 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 SUPERFAMILY SSF82829 248 328 3.4E-17 T 26-04-2016 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 PANTHER PTHR11807 25 426 1.1E-87 T 26-04-2016 PAM18_RS06620 38a7b8f402d43f1ef0b2b150bf7da567 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 409 2.1E-14 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 8.6E-23 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 SMART SM00422 19 89 5.3E-9 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 SUPERFAMILY SSF46955 17 113 1.6E-20 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 PANTHER PTHR30204 11 118 3.4E-34 T 26-04-2016 PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 Gene3D G3DSA:1.10.1660.10 19 113 3.4E-18 T 26-04-2016 PAM18_RS11495 7440dff33f76380cd36e98359334cc38 118 PANTHER PTHR30204:SF15 11 118 3.4E-34 T 26-04-2016 PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 Gene3D G3DSA:1.20.1250.20 13 190 3.9E-18 T 26-04-2016 PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 Gene3D G3DSA:1.20.1250.20 220 389 2.0E-10 T 26-04-2016 PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 PANTHER PTHR23501 8 396 1.2E-166 T 26-04-2016 PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 PANTHER PTHR23501:SF79 8 396 1.2E-166 T 26-04-2016 PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 SUPERFAMILY SSF103473 9 389 2.75E-41 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18185 2d966139f92a60c2e4a7f1bdcf79ea01 403 Pfam PF07690 Major Facilitator Superfamily 22 319 1.5E-22 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 PANTHER PTHR10937:SF8 30 339 5.3E-144 T 26-04-2016 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 SUPERFAMILY SSF53697 5 338 3.09E-65 T 26-04-2016 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 Gene3D G3DSA:3.40.50.10490 23 166 8.2E-22 T 26-04-2016 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 Pfam PF01380 SIS domain 198 281 1.5E-15 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 Pfam PF01380 SIS domain 43 156 6.9E-14 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 PANTHER PTHR10937 30 339 5.3E-144 T 26-04-2016 PAM18_RS06010 b30192e3203d89a38f9da8465c583317 340 Gene3D G3DSA:3.40.50.10490 180 339 1.8E-45 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 PANTHER PTHR18966 7 267 3.7E-42 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 PANTHER PTHR18966:SF191 7 267 3.7E-42 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 2.8E-50 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 SUPERFAMILY SSF53850 2 256 2.9E-59 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 Gene3D G3DSA:3.40.190.10 217 255 1.0E-30 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 Gene3D G3DSA:3.40.190.10 31 112 1.0E-30 T 26-04-2016 PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 SMART SM00062 34 257 6.7E-56 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS03795 f7fe2f53d2931ca9d21722a38aaf50d3 276 Gene3D G3DSA:3.40.190.10 113 216 6.8E-18 T 26-04-2016 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF03466 LysR substrate binding domain 93 298 7.5E-43 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 180 269 1.5E-38 T 26-04-2016 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF46785 4 115 8.56E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF53850 94 301 2.17E-40 T 26-04-2016 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:1.10.10.10 4 84 4.4E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 94 179 2.0E-24 T 26-04-2016 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 PANTHER PTHR30346 4 306 1.0E-204 T 26-04-2016 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01080 5c8dde2b62b6fe521955efe33cd15971 306 PANTHER PTHR30346:SF13 4 306 1.0E-204 T 26-04-2016 PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 Gene3D G3DSA:1.20.1250.20 192 376 4.4E-26 T 26-04-2016 PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 PANTHER PTHR23522 1 386 4.7E-127 T 26-04-2016 PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 PANTHER PTHR23522:SF3 1 386 4.7E-127 T 26-04-2016 PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 PIRSF PIRSF004925 1 384 7.2E-116 T 26-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 Gene3D G3DSA:1.20.1250.20 2 176 3.2E-15 T 26-04-2016 PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 SUPERFAMILY SSF103473 2 374 4.45E-43 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15265 a0a5dc25eb2dc99698745b902e896af3 387 Pfam PF12832 MFS_1 like family 8 347 1.4E-38 T 26-04-2016 IPR024989 Major facilitator superfamily associated domain PAM18_RS02015 5720834efb8e6b1a5a6b3ed0246f3e9d 134 PANTHER PTHR21016 6 67 4.0E-24 T 26-04-2016 PAM18_RS02015 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 8 54 5.0E-15 T 26-04-2016 IPR007829 TM2 domain PAM18_RS02015 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 74 119 7.6E-15 T 26-04-2016 IPR007829 TM2 domain PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.605.10 21 280 1.0E-92 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 PANTHER PTHR11699:SF210 1 497 0.0 T 26-04-2016 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.309.10 281 468 2.4E-69 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 PANTHER PTHR11699 1 497 0.0 T 26-04-2016 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 Pfam PF00171 Aldehyde dehydrogenase family 32 492 1.9E-170 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 SUPERFAMILY SSF53720 17 496 8.51E-167 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS27755 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 SUPERFAMILY SSF53056 11 227 9.94E-70 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 PANTHER PTHR11002 3 230 5.4E-99 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 Pfam PF00484 Carbonic anhydrase 55 210 2.0E-50 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 103 123 - T 26-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 PANTHER PTHR11002:SF13 3 230 5.4E-99 T 26-04-2016 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 SMART SM00947 48 215 1.5E-65 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 Gene3D G3DSA:3.40.1050.10 8 226 6.5E-77 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS00520 aa1a0161debafdf2b6375f3e08bfeba8 242 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 60 67 - T 26-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF55681 2 253 7.46E-107 T 26-04-2016 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 695 3.9E-19 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF55186 550 706 7.59E-52 T 26-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF101353 254 452 6.02E-63 T 26-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF50447 452 550 1.69E-19 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF01411 tRNA synthetases class II (A) 5 552 2.0E-228 T 26-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PANTHER PTHR11777 1 874 0.0 T 26-04-2016 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF02272 DHHA1 domain 799 867 4.7E-17 T 26-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 Gene3D G3DSA:3.30.930.10 1 249 5.5E-125 T 26-04-2016 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 SMART SM00863 651 695 8.2E-23 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 208.918 T 26-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 4.1E-31 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 4.1E-31 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 4.1E-31 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 4.1E-31 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 4.1E-31 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 PAM18_RS21130 d9db425b631c44d6c154710c49b6f4d8 874 PANTHER PTHR11777:SF9 1 874 0.0 T 26-04-2016 PAM18_RS24385 e611dafdf4219a5c9281fc2623f218cd 333 PANTHER PTHR30349:SF20 104 317 7.7E-36 T 26-04-2016 PAM18_RS24385 e611dafdf4219a5c9281fc2623f218cd 333 Gene3D G3DSA:1.10.443.10 158 317 7.8E-38 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS24385 e611dafdf4219a5c9281fc2623f218cd 333 Pfam PF00589 Phage integrase family 159 308 1.5E-19 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS24385 e611dafdf4219a5c9281fc2623f218cd 333 PANTHER PTHR30349 104 317 7.7E-36 T 26-04-2016 PAM18_RS24385 e611dafdf4219a5c9281fc2623f218cd 333 SUPERFAMILY SSF56349 57 316 8.24E-50 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Gene3D G3DSA:2.40.110.10 190 280 3.9E-20 T 26-04-2016 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 SUPERFAMILY SSF56645 66 288 9.69E-45 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 395 414 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 PANTHER PTHR10909 2 423 5.3E-259 T 26-04-2016 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 297 423 1.4E-30 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Gene3D G3DSA:1.10.540.10 64 183 2.9E-24 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Gene3D G3DSA:1.20.140.10 281 423 9.0E-41 T 26-04-2016 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 190 279 5.3E-10 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 71 184 1.3E-18 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 SUPERFAMILY SSF47203 296 423 1.14E-37 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26135 5b89cab8134318b14e1472c4baf70997 427 PANTHER PTHR10909:SF243 2 423 5.3E-259 T 26-04-2016 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 97 119 6.5E-7 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 226 244 6.5E-7 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 144 165 6.5E-7 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 SUPERFAMILY SSF117892 122 255 9.94E-24 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 PANTHER PTHR10264:SF51 5 388 1.2E-169 T 26-04-2016 IPR010201 HflK GO:0016021 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 TIGRFAM TIGR01933 hflK: HflK protein 92 353 9.8E-113 T 26-04-2016 IPR010201 HflK GO:0016021 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 PANTHER PTHR10264 5 388 1.2E-169 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF01145 SPFH domain / Band 7 family 94 266 1.2E-30 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 SMART SM00244 90 250 2.8E-33 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25865 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF12221 Bacterial membrane protein N terminal 1 55 2.9E-15 T 26-04-2016 IPR020980 Menbrane protein HflK, N-terminal PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PRINTS PR01005 Flagellar hook-associated protein signature 362 384 5.1E-14 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 5.1E-14 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 5.1E-14 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 5.1E-14 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 5.1E-14 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 SUPERFAMILY SSF64518 145 455 9.55E-17 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PANTHER PTHR30033:SF1 1 436 2.8E-125 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PANTHER PTHR30033:SF1 478 682 2.8E-125 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 SUPERFAMILY SSF64518 503 682 5.36E-21 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PANTHER PTHR30033 1 436 2.8E-125 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 PANTHER PTHR30033 478 682 2.8E-125 T 26-04-2016 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 346 4.1E-76 T 26-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PAM18_RS20215 99ccb67eb4500123c27471c34720b76f 682 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 625 679 1.3E-8 T 26-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAM18_RS25520 faab9f432fdf1dff14e78eae25ed06b7 179 PANTHER PTHR36930 1 178 6.7E-39 T 26-04-2016 PAM18_RS25520 faab9f432fdf1dff14e78eae25ed06b7 179 Gene3D G3DSA:2.40.33.20 3 179 9.5E-63 T 26-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PAM18_RS25520 faab9f432fdf1dff14e78eae25ed06b7 179 PANTHER PTHR36930:SF1 1 178 6.7E-39 T 26-04-2016 PAM18_RS25520 faab9f432fdf1dff14e78eae25ed06b7 179 SUPERFAMILY SSF50800 2 169 1.41E-41 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS25520 faab9f432fdf1dff14e78eae25ed06b7 179 Pfam PF03473 MOSC domain 56 164 4.7E-6 T 26-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 SUPERFAMILY SSF46689 385 458 7.17E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Pfam PF08448 PAS fold 27 135 3.8E-16 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Gene3D G3DSA:1.10.8.60 318 368 3.7E-18 T 26-04-2016 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Gene3D G3DSA:3.30.450.20 22 126 1.1E-9 T 26-04-2016 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Gene3D G3DSA:1.10.10.60 369 458 6.0E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 PANTHER PTHR32071:SF30 142 463 2.1E-217 T 26-04-2016 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 4.9E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 4.9E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Gene3D G3DSA:3.40.50.300 150 317 8.3E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 SUPERFAMILY SSF55785 22 124 2.69E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 SUPERFAMILY SSF52540 155 384 3.75E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Pfam PF02954 Bacterial regulatory protein, Fis family 416 456 6.8E-10 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 SMART SM00382 166 308 1.8E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 PANTHER PTHR32071 142 463 2.1E-217 T 26-04-2016 PAM18_RS19610 155fe61375501b66849b298b1e289bd1 466 Pfam PF00158 Sigma-54 interaction domain 150 309 3.0E-59 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 SUPERFAMILY SSF53955 104 208 5.06E-47 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 SUPERFAMILY SSF53955 2 76 5.06E-47 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 PANTHER PTHR34408 21 60 3.3E-48 T 26-04-2016 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 PANTHER PTHR34408 92 209 3.3E-48 T 26-04-2016 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 Pfam PF00182 Chitinase class I 103 167 1.9E-4 T 26-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 Gene3D G3DSA:1.10.530.10 152 203 1.2E-8 T 26-04-2016 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 Gene3D G3DSA:1.10.530.10 30 54 1.2E-8 T 26-04-2016 PAM18_RS03115 2d6f13bb097f062e4bd58172024122b8 209 Gene3D G3DSA:3.30.20.10 115 151 3.9E-9 T 26-04-2016 PAM18_RS24790 10133a69f441ffc2c4a179aa206b2f2b 293 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 272 1.9E-56 T 26-04-2016 IPR018713 Domain of unknown function DUF2236 PAM18_RS24790 10133a69f441ffc2c4a179aa206b2f2b 293 PANTHER PTHR36151 1 293 1.4E-131 T 26-04-2016 PAM18_RS24790 10133a69f441ffc2c4a179aa206b2f2b 293 PANTHER PTHR36151:SF3 1 293 1.4E-131 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 PANTHER PTHR24096 177 560 1.0E-175 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 PANTHER PTHR24096 23 161 1.0E-175 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Gene3D G3DSA:3.40.50.980 197 221 7.0E-34 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Gene3D G3DSA:3.40.50.980 25 138 7.0E-34 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 SUPERFAMILY SSF56801 21 561 4.19E-151 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Pfam PF00501 AMP-binding enzyme 30 469 1.9E-108 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Gene3D G3DSA:3.30.300.30 464 561 2.3E-31 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Gene3D G3DSA:2.30.38.10 387 460 3.4E-30 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Gene3D G3DSA:3.40.50.980 222 386 2.3E-41 T 26-04-2016 PAM18_RS08560 57bb7a8daf4da088d12e7b1d1aa64cbc 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 552 1.5E-19 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 Pfam PF02690 Na+/Pi-cotransporter 142 251 5.5E-12 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 Pfam PF02690 Na+/Pi-cotransporter 16 150 4.6E-33 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 SUPERFAMILY SSF109755 328 527 2.62E-25 T 26-04-2016 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 PANTHER PTHR10010 413 476 2.9E-27 T 26-04-2016 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 PANTHER PTHR10010 1 124 2.9E-27 T 26-04-2016 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 305 4.1E-63 T 26-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 Pfam PF01895 PhoU domain 338 419 5.1E-7 T 26-04-2016 IPR026022 PhoU domain PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 Gene3D G3DSA:1.20.58.220 448 526 3.2E-5 T 26-04-2016 PAM18_RS25255 b9f316576141f1a7440a00f31fb5f3a0 555 Gene3D G3DSA:1.20.58.220 329 419 2.0E-7 T 26-04-2016 PAM18_RS27245 79d7ee3af8c606c953fe773e155d174e 150 PANTHER PTHR33507 1 150 4.5E-44 T 26-04-2016 PAM18_RS27245 79d7ee3af8c606c953fe773e155d174e 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 2.8E-28 T 26-04-2016 IPR002810 NfeD-like, C-terminal domain PAM18_RS27245 79d7ee3af8c606c953fe773e155d174e 150 Gene3D G3DSA:2.40.50.140 93 148 6.9E-5 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27245 79d7ee3af8c606c953fe773e155d174e 150 PANTHER PTHR33507:SF3 1 150 4.5E-44 T 26-04-2016 PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 PANTHER PTHR10108 20 257 1.2E-56 T 26-04-2016 PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 PIRSF PIRSF018249 1 267 4.0E-83 T 26-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 Pfam PF13649 Methyltransferase domain 86 168 5.9E-11 T 26-04-2016 PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 PANTHER PTHR10108:SF886 20 257 1.2E-56 T 26-04-2016 PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 Gene3D G3DSA:3.40.50.150 67 235 2.3E-20 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19785 04f82aa1caac03ceb81c6bcd0fce1b83 267 SUPERFAMILY SSF53335 1 249 8.6E-40 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS08815 327567fab987e6c60e2444af0424acdc 265 Gene3D G3DSA:1.10.3720.10 15 263 1.2E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08815 327567fab987e6c60e2444af0424acdc 265 PANTHER PTHR30193 1 264 1.9E-68 T 26-04-2016 PAM18_RS08815 327567fab987e6c60e2444af0424acdc 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 262 4.9E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08815 327567fab987e6c60e2444af0424acdc 265 SUPERFAMILY SSF161098 6 263 8.5E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08815 327567fab987e6c60e2444af0424acdc 265 PANTHER PTHR30193:SF20 1 264 1.9E-68 T 26-04-2016 PAM18_RS22295 75da13ad9d1652e0342dc44a3d212653 198 Gene3D G3DSA:1.20.910.10 5 197 1.1E-71 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS22295 75da13ad9d1652e0342dc44a3d212653 198 SUPERFAMILY SSF48613 14 196 5.72E-55 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS22295 75da13ad9d1652e0342dc44a3d212653 198 Pfam PF01126 Heme oxygenase 15 194 4.6E-35 T 26-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Gene3D G3DSA:3.40.50.300 155 331 1.9E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Gene3D G3DSA:3.30.450.20 15 115 2.3E-8 T 26-04-2016 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 245 260 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Gene3D G3DSA:1.10.10.60 413 468 2.7E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 SMART SM00382 178 323 9.4E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Pfam PF08448 PAS fold 26 116 4.5E-7 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 PANTHER PTHR32071 1 479 1.6E-283 T 26-04-2016 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 PANTHER PTHR32071:SF22 1 479 1.6E-283 T 26-04-2016 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 SMART SM00091 19 86 0.0065 T 26-04-2016 IPR000014 PAS domain PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Pfam PF00158 Sigma-54 interaction domain 159 326 2.7E-63 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Gene3D G3DSA:1.10.8.60 332 401 7.8E-17 T 26-04-2016 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 SUPERFAMILY SSF52540 158 397 9.69E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 SUPERFAMILY SSF46689 369 468 5.02E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 SUPERFAMILY SSF55785 11 116 2.44E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 Pfam PF02954 Bacterial regulatory protein, Fis family 426 463 2.8E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 1.4E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS15585 e8205b6724409b13f0c33d1c527f93d1 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.4E-8 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 Gene3D G3DSA:3.40.190.10 176 263 7.8E-13 T 26-04-2016 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 SUPERFAMILY SSF53850 88 298 5.07E-38 T 26-04-2016 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 Pfam PF03466 LysR substrate binding domain 88 294 2.2E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 Gene3D G3DSA:1.10.10.10 4 85 4.0E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 Gene3D G3DSA:3.40.190.10 92 175 5.2E-17 T 26-04-2016 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 SUPERFAMILY SSF46785 4 88 3.34E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 PANTHER PTHR30537 1 308 7.2E-115 T 26-04-2016 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 PANTHER PTHR30537:SF5 1 308 7.2E-115 T 26-04-2016 PAM18_RS00915 8efad9346bf9092739a6d91cd6df716f 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.0E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 Gene3D G3DSA:3.40.30.10 1 53 6.1E-19 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 Gene3D G3DSA:3.40.30.10 154 187 7.5E-5 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 PANTHER PTHR13887 1 195 3.1E-25 T 26-04-2016 PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 Pfam PF01323 DSBA-like thioredoxin domain 1 175 1.7E-13 T 26-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 Gene3D G3DSA:1.10.472.60 54 153 1.8E-48 T 26-04-2016 IPR023169 UPF0413, central domain PAM18_RS21355 6180cebd0fa4723c4eecf96cadd831c4 200 SUPERFAMILY SSF52833 1 196 1.1E-36 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS12905 1803b470a8c546927d166184d6db9261 331 Gene3D G3DSA:3.20.20.100 1 323 1.7E-119 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS12905 1803b470a8c546927d166184d6db9261 331 PANTHER PTHR11732:SF225 1 330 8.2E-161 T 26-04-2016 PAM18_RS12905 1803b470a8c546927d166184d6db9261 331 SUPERFAMILY SSF51430 1 312 3.27E-104 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS12905 1803b470a8c546927d166184d6db9261 331 Pfam PF00248 Aldo/keto reductase family 16 310 2.4E-81 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS12905 1803b470a8c546927d166184d6db9261 331 PANTHER PTHR11732 1 330 8.2E-161 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 220 2.3E-25 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 PANTHER PTHR10909:SF278 1 382 5.5E-246 T 26-04-2016 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 SUPERFAMILY SSF56645 1 243 6.54E-69 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.4E-18 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:1.10.540.10 1 119 1.3E-23 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:1.20.140.10 222 382 8.7E-69 T 26-04-2016 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 1.2E-51 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 SUPERFAMILY SSF47203 230 382 2.9E-55 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 PANTHER PTHR10909 1 382 5.5E-246 T 26-04-2016 PAM18_RS26050 e293d9e64f6f5d29c58eb330e921e681 386 Gene3D G3DSA:2.40.110.10 121 221 3.7E-38 T 26-04-2016 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.2E-7 T 26-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 Gene3D G3DSA:3.40.30.10 4 183 2.2E-58 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 PANTHER PTHR10681 1 187 3.3E-89 T 26-04-2016 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF00578 AhpC/TSA family 4 132 4.4E-30 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 SUPERFAMILY SSF52833 1 186 1.15E-51 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 PANTHER PTHR10681:SF121 1 187 3.3E-89 T 26-04-2016 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 PIRSF PIRSF000239 1 187 6.7E-45 T 26-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PAM18_RS00705 e385d4640b0ebdaae40a0a618361f0a0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.8E-95 T 26-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 7.4E-150 T 26-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 Gene3D G3DSA:3.80.30.20 146 380 9.9E-78 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 73.698 T 26-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 Pfam PF04055 Radical SAM superfamily 151 325 1.3E-28 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 SMART SM00729 147 367 3.4E-58 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 PANTHER PTHR11918:SF43 1 444 1.2E-206 T 26-04-2016 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 26-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 8.4E-28 T 26-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.5E-185 T 26-04-2016 PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 Pfam PF01938 TRAM domain 378 441 9.9E-20 T 26-04-2016 IPR002792 TRAM domain PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 PANTHER PTHR11918 1 444 1.2E-206 T 26-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PAM18_RS04875 c5b818880f98b35f956258f84429ea24 446 SUPERFAMILY SSF102114 125 375 2.62E-61 T 26-04-2016 PAM18_RS14725 6d629ce4b25c4daf1de4a3888c38cfc4 156 Pfam PF01814 Hemerythrin HHE cation binding domain 3 124 1.5E-17 T 26-04-2016 IPR012312 Haemerythrin-like PAM18_RS14725 6d629ce4b25c4daf1de4a3888c38cfc4 156 PANTHER PTHR35585 1 155 1.1E-42 T 26-04-2016 PAM18_RS14725 6d629ce4b25c4daf1de4a3888c38cfc4 156 Gene3D G3DSA:1.20.120.520 3 144 4.5E-16 T 26-04-2016 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 PANTHER PTHR30246:SF0 7 215 7.2E-116 T 26-04-2016 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 Pfam PF01081 KDPG and KHG aldolase 12 201 2.2E-68 T 26-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 PANTHER PTHR30246 7 215 7.2E-116 T 26-04-2016 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 Gene3D G3DSA:3.20.20.70 11 210 1.4E-72 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 38 47 - T 26-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 207 2.3E-85 T 26-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PAM18_RS09410 1fc224d6ca879fda044d1f492482ab72 215 SUPERFAMILY SSF51569 11 208 6.41E-66 T 26-04-2016 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 SMART SM00852 15 159 6.2E-33 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 Gene3D G3DSA:3.40.980.10 6 171 1.3E-48 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 PANTHER PTHR10192:SF18 5 174 2.9E-99 T 26-04-2016 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 4.1E-86 T 26-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 26-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 SUPERFAMILY SSF53218 8 169 2.09E-47 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 PIRSF PIRSF006443 1 167 4.3E-66 T 26-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.7E-33 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 PANTHER PTHR10192 5 174 2.9E-99 T 26-04-2016 PAM18_RS09925 094fb52c4eaa843f04ada84da052f0d6 179 Pfam PF00994 Probable molybdopterin binding domain 15 157 4.6E-34 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 64 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 1.14E-40 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 Gene3D G3DSA:3.40.190.10 127 277 1.2E-44 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PIRSF PIRSF019574 1 354 5.2E-99 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 Gene3D G3DSA:3.40.190.10 21 126 6.2E-44 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 Gene3D G3DSA:3.40.190.10 278 316 6.2E-44 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PANTHER PTHR30222 1 352 6.0E-153 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 SUPERFAMILY SSF53850 22 352 1.4E-83 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 PANTHER PTHR30222:SF10 1 352 6.0E-153 T 26-04-2016 PAM18_RS07080 d49c2844304afdf044cecb890dab721e 354 Pfam PF13416 Bacterial extracellular solute-binding protein 39 317 1.4E-29 T 26-04-2016 PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 Gene3D G3DSA:3.40.50.1820 290 603 4.5E-58 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 SUPERFAMILY SSF53474 350 602 8.53E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 Pfam PF00326 Prolyl oligopeptidase family 399 606 1.4E-35 T 26-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 Gene3D G3DSA:2.130.10.10 132 289 9.0E-5 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 PANTHER PTHR11731 28 608 1.0E-128 T 26-04-2016 PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 PANTHER PTHR11731:SF75 28 608 1.0E-128 T 26-04-2016 PAM18_RS15660 b64aa8d2629e941f1729147581a54992 608 SUPERFAMILY SSF82171 68 294 7.65E-6 T 26-04-2016 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 281 1.5E-79 T 26-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 26-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PANTHER PTHR11482 1 415 2.7E-184 T 26-04-2016 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 388 1.9E-18 T 26-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.0E-30 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 5.0E-30 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.0E-30 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 5.0E-30 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 43.118 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 SUPERFAMILY SSF51419 26 282 4.97E-81 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 9.5E-27 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 9.5E-27 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 9.5E-27 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 9.5E-27 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 9.5E-27 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 SUPERFAMILY SSF50621 255 411 1.15E-53 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 Gene3D G3DSA:2.40.37.10 268 412 2.8E-50 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 2.2E-162 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 Gene3D G3DSA:3.20.20.10 36 267 8.0E-85 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS27580 547ba5556f547a4014d8a15ae7e8c324 415 PANTHER PTHR11482:SF5 1 415 2.7E-184 T 26-04-2016 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 26-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 Pfam PF00290 Tryptophan synthase alpha chain 8 263 1.6E-104 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 PANTHER PTHR10314 74 130 6.0E-24 T 26-04-2016 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 PANTHER PTHR10314 1 51 6.0E-24 T 26-04-2016 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 PANTHER PTHR10314:SF4 74 130 6.0E-24 T 26-04-2016 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 PANTHER PTHR10314:SF4 1 51 6.0E-24 T 26-04-2016 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 Gene3D G3DSA:3.20.20.70 2 266 6.1E-105 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 38.119 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 SUPERFAMILY SSF51366 1 248 1.22E-92 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS00180 60ac1f39907b7fe8f087028091a31db2 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 2.1E-81 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 PAM18_RS25105 b472f8c346b384d33dea0b47473aabf3 160 PANTHER PTHR23091:SF250 1 160 9.4E-95 T 26-04-2016 PAM18_RS25105 b472f8c346b384d33dea0b47473aabf3 160 Pfam PF00583 Acetyltransferase (GNAT) family 56 134 1.4E-10 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS25105 b472f8c346b384d33dea0b47473aabf3 160 Gene3D G3DSA:3.40.630.30 1 158 1.6E-40 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS25105 b472f8c346b384d33dea0b47473aabf3 160 PANTHER PTHR23091 1 160 9.4E-95 T 26-04-2016 PAM18_RS25105 b472f8c346b384d33dea0b47473aabf3 160 SUPERFAMILY SSF55729 1 158 1.63E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.30.70.260 352 421 4.0E-14 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.40.50.720 2 146 3.4E-48 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 PANTHER PTHR21499:SF2 4 327 3.5E-135 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Gene3D G3DSA:3.30.360.10 147 296 1.1E-56 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 PIRSF PIRSF000098 1 433 2.3E-167 T 26-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF00742 Homoserine dehydrogenase 135 313 8.1E-64 T 26-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF55347 135 300 1.5E-52 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF55021 350 420 2.41E-15 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 3.0E-25 T 26-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 PANTHER PTHR21499 4 327 3.5E-135 T 26-04-2016 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 SUPERFAMILY SSF51735 2 156 6.26E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 Pfam PF01842 ACT domain 352 419 3.7E-16 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS06125 7bcd5def170badf68f83c5ec0ec03df7 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 26-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Pfam PF03466 LysR substrate binding domain 99 301 1.5E-23 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Gene3D G3DSA:3.40.190.10 93 175 1.0E-29 T 26-04-2016 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Gene3D G3DSA:3.40.190.10 276 303 1.0E-29 T 26-04-2016 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 3.7E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 SUPERFAMILY SSF46785 7 87 2.81E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 SUPERFAMILY SSF53850 93 299 7.42E-41 T 26-04-2016 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Gene3D G3DSA:1.10.10.10 5 87 6.9E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 Gene3D G3DSA:3.40.190.10 176 272 7.8E-26 T 26-04-2016 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 PANTHER PTHR30118 1 304 4.7E-139 T 26-04-2016 PAM18_RS08445 2fd7d146637d1401e26500313dd3dfcf 304 PANTHER PTHR30118:SF8 1 304 4.7E-139 T 26-04-2016 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 PANTHER PTHR30055:SF73 1 149 1.5E-22 T 26-04-2016 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 SUPERFAMILY SSF46689 4 77 3.8E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 Gene3D G3DSA:1.10.10.60 9 56 5.1E-20 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 2.0E-12 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.2E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.2E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 SUPERFAMILY SSF48498 84 199 2.67E-30 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 Gene3D G3DSA:1.10.357.10 57 212 2.7E-25 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 PANTHER PTHR30055 1 149 1.5E-22 T 26-04-2016 PAM18_RS12290 eab27b289db23e81cd86e2700bb8feaa 216 Pfam PF09209 Domain of unknown function (DUF1956) 89 205 8.5E-26 T 26-04-2016 IPR015292 Transcription regulator YbiH, C-terminal PAM18_RS17970 4046e248d96267752e31d90e094873b5 122 PANTHER PTHR30561 1 111 5.4E-66 T 26-04-2016 PAM18_RS17970 4046e248d96267752e31d90e094873b5 122 Pfam PF00893 Small Multidrug Resistance protein 3 93 2.6E-23 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS17970 4046e248d96267752e31d90e094873b5 122 SUPERFAMILY SSF103481 5 105 2.75E-16 T 26-04-2016 PAM18_RS17970 4046e248d96267752e31d90e094873b5 122 PANTHER PTHR30561:SF2 1 111 5.4E-66 T 26-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PIRSF PIRSF001220 1 326 2.7E-83 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PANTHER PTHR11707 2 325 2.5E-118 T 26-04-2016 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 9 17 - T 26-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 1.7E-11 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PRINTS PR00139 Asparaginase/glutaminase family signature 85 103 1.7E-11 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 1.7E-11 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 86 96 - T 26-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 Pfam PF00710 Asparaginase, N-terminal 7 182 3.3E-46 T 26-04-2016 IPR027474 L-asparaginase, N-terminal PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 SMART SM00870 6 315 5.3E-96 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 Gene3D G3DSA:3.40.50.40 202 325 3.4E-33 T 26-04-2016 IPR027473 L-asparaginase, C-terminal domain PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PIRSF PIRSF500176 3 324 1.5E-94 T 26-04-2016 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 PANTHER PTHR11707:SF3 2 325 2.5E-118 T 26-04-2016 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 SUPERFAMILY SSF53774 3 326 1.57E-87 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS14320 35eb2f0a8803deb24c30ba0f55ee6368 328 Gene3D G3DSA:3.40.50.1170 4 183 3.5E-50 T 26-04-2016 IPR027474 L-asparaginase, N-terminal PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 SUPERFAMILY SSF46894 140 208 5.44E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 SUPERFAMILY SSF52172 5 141 3.84E-24 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 SMART SM00448 6 122 6.1E-14 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 Gene3D G3DSA:3.40.50.2300 4 127 3.4E-23 T 26-04-2016 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 PANTHER PTHR26402:SF458 6 206 8.6E-45 T 26-04-2016 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.0E-6 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.0E-6 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.0E-6 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 PANTHER PTHR26402 6 206 8.6E-45 T 26-04-2016 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 SMART SM00421 149 206 6.6E-14 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 3.4E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 Gene3D G3DSA:1.10.10.10 128 208 6.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04380 1eb56143eda35e47f66f026420d53c0d 214 Pfam PF00072 Response regulator receiver domain 8 122 2.2E-16 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 SUPERFAMILY SSF57716 38 73 3.56E-8 T 26-04-2016 PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.18E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.18E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 6.5E-17 T 26-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 26-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 PANTHER PTHR38777:SF1 2 88 3.8E-34 T 26-04-2016 PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 69 1.9E-13 T 26-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PAM18_RS25495 90bcbb8301d2a3cc794f7987d4f65d0e 88 PANTHER PTHR38777 2 88 3.8E-34 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 268 1.4E-12 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.4E-12 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-12 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 Gene3D G3DSA:3.50.50.60 245 291 6.9E-37 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 Gene3D G3DSA:3.50.50.60 1 126 6.9E-37 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PANTHER PTHR22912:SF159 1 287 3.0E-121 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 271 2.2E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 Gene3D G3DSA:3.50.50.60 127 221 3.8E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 SUPERFAMILY SSF51905 1 152 7.22E-26 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 SUPERFAMILY SSF51905 218 291 7.22E-26 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 SUPERFAMILY SSF51905 114 215 1.86E-5 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PANTHER PTHR22912 1 287 3.0E-121 T 26-04-2016 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 2.8E-8 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 2.8E-8 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 2.8E-8 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS03920 d160f058c5e6a82a8318afaebc8522c3 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.8E-8 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 PANTHER PTHR11773 6 958 0.0 T 26-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 SUPERFAMILY SSF53383 929 951 4.54E-96 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 SUPERFAMILY SSF53383 473 887 4.54E-96 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 Pfam PF01212 Beta-eliminating lyase 546 711 7.7E-5 T 26-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 SUPERFAMILY SSF53383 19 442 1.25E-97 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 956 25.73 T 26-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 Gene3D G3DSA:3.40.640.10 89 317 7.4E-11 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 Gene3D G3DSA:3.40.640.10 503 739 1.5E-41 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 950 0.0 T 26-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 Pfam PF02347 Glycine cleavage system P-protein 18 441 7.2E-174 T 26-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 PAM18_RS27255 436b62b750c3617dde9180e63abc0c0c 958 PANTHER PTHR11773:SF1 6 958 0.0 T 26-04-2016 PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PANTHER PTHR30332:SF3 17 626 1.8E-291 T 26-04-2016 PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 449 5.2E-38 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 5.2E-38 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 579 5.2E-38 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 362 5.2E-38 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 598 5.2E-38 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 PANTHER PTHR30332 17 626 1.8E-291 T 26-04-2016 PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 Pfam PF00263 Bacterial type II and III secretion system protein 429 597 9.0E-52 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 48 605 2.8E-157 T 26-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 Pfam PF03958 Bacterial type II/III secretion system short domain 277 352 8.0E-14 T 26-04-2016 IPR005644 NolW-like PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 Pfam PF03958 Bacterial type II/III secretion system short domain 206 271 2.8E-10 T 26-04-2016 IPR005644 NolW-like PAM18_RS16260 b88e13fa298452dd545db648675ed70b 776 Pfam PF03958 Bacterial type II/III secretion system short domain 141 200 2.4E-8 T 26-04-2016 IPR005644 NolW-like PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 Pfam PF13307 Helicase C-terminal domain 596 756 3.2E-31 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 PANTHER PTHR11472 185 756 2.4E-87 T 26-04-2016 PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SUPERFAMILY SSF52540 520 682 3.29E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SUPERFAMILY SSF52540 714 739 3.29E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SMART SM00491 609 744 8.3E-9 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SUPERFAMILY SSF52540 155 292 2.85E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SUPERFAMILY SSF52540 344 398 2.85E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 SUPERFAMILY SSF52540 512 538 2.85E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 Gene3D G3DSA:3.40.50.300 341 408 1.8E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 Gene3D G3DSA:3.40.50.300 526 538 1.8E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 Gene3D G3DSA:3.40.50.300 183 292 1.8E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16275 b5c73f7b051031137bb02e6bf4911fb2 758 Pfam PF06733 DEAD_2 278 396 4.6E-11 T 26-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 PANTHER PTHR33164:SF4 1 147 3.1E-36 T 26-04-2016 PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 104 - T 26-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 PANTHER PTHR33164 1 147 3.1E-36 T 26-04-2016 PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 Pfam PF01047 MarR family 40 96 1.1E-10 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 Gene3D G3DSA:1.10.10.10 9 146 3.9E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 SMART SM00347 30 133 2.5E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS01255 e40850250f3285d348707504f7a3d61a 154 SUPERFAMILY SSF46785 11 148 4.91E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PANTHER PTHR30194 1 169 1.6E-67 T 26-04-2016 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.81 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 26-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 4.0E-60 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 SUPERFAMILY SSF53098 3 156 1.74E-50 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.2E-41 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.2E-41 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.2E-41 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.2E-41 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.2E-41 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 Gene3D G3DSA:3.30.420.10 3 156 1.3E-61 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS20790 9a32773c3b60ea9c62c6837fd87285a5 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.2E-68 T 26-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 PANTHER PTHR30417 1 256 5.5E-83 T 26-04-2016 PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 Gene3D G3DSA:3.40.80.10 25 183 1.4E-56 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 SMART SM00644 24 165 1.0E-41 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 Gene3D G3DSA:1.10.101.10 199 253 5.9E-4 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 SUPERFAMILY SSF47090 194 255 4.32E-17 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 166 9.9E-24 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 Pfam PF01471 Putative peptidoglycan binding domain 199 253 1.0E-8 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS28655 bb8f1caa0efecdb6a0c9caedb3792f21 259 SUPERFAMILY SSF55846 22 177 1.16E-54 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 SUPERFAMILY SSF81606 4 228 8.89E-46 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 SUPERFAMILY SSF56112 246 511 1.48E-50 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 SMART SM00331 22 228 1.0E-11 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 Pfam PF13672 Protein phosphatase 2C 17 186 4.6E-8 T 26-04-2016 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 SMART SM00332 1 226 2.9E-5 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 SMART SM00220 261 512 2.2E-13 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 PANTHER PTHR24348 303 511 1.5E-160 T 26-04-2016 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 PANTHER PTHR24348:SF23 303 511 1.5E-160 T 26-04-2016 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 Gene3D G3DSA:3.60.40.10 3 228 4.7E-45 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 Pfam PF00069 Protein kinase domain 265 460 5.4E-26 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS16740 78691ce9662eb6b90cfd1b6fa09037ee 555 Gene3D G3DSA:1.10.510.10 329 511 3.3E-36 T 26-04-2016 PAM18_RS01050 df5e1c7360379308d7bb0c3b79f472fa 210 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 9 202 9.4E-55 T 26-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PAM18_RS01050 df5e1c7360379308d7bb0c3b79f472fa 210 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 9 201 2.3E-57 T 26-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PAM18_RS01050 df5e1c7360379308d7bb0c3b79f472fa 210 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 6 207 37.157 T 26-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Gene3D G3DSA:3.40.50.150 458 724 6.3E-73 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 PIRSF PIRSF037618 2 725 0.0 T 26-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 PANTHER PTHR18895:SF62 427 695 1.6E-116 T 26-04-2016 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 SUPERFAMILY SSF53335 265 384 1.16E-38 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 SUPERFAMILY SSF53335 143 224 1.16E-38 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Pfam PF02926 THUMP domain 45 156 1.1E-11 T 26-04-2016 IPR004114 THUMP domain GO:0003723 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 SMART SM00981 59 157 1.6E-22 T 26-04-2016 IPR004114 THUMP domain GO:0003723 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Gene3D G3DSA:3.40.50.150 150 221 2.3E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Gene3D G3DSA:3.40.50.150 262 363 2.3E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Pfam PF01170 Putative RNA methylase family UPF0020 165 380 1.0E-43 T 26-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 SUPERFAMILY SSF53335 421 720 1.31E-68 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 PANTHER PTHR18895 427 695 1.6E-116 T 26-04-2016 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 504 679 4.0E-19 T 26-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PAM18_RS09825 1176819e4dbde1622ec6b6ae8068f245 725 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 725 33.186 T 26-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 2.0E-71 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.50.50.60 2 147 1.3E-41 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.50.50.60 148 340 6.9E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.7E-164 T 26-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.5E-82 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.30.390.30 341 471 1.2E-50 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 8.5E-42 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-42 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 8.5E-42 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 8.5E-42 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.5E-42 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PANTHER PTHR22912:SF131 1 465 4.1E-287 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 SUPERFAMILY SSF55424 349 473 2.58E-42 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PANTHER PTHR22912 1 465 4.1E-287 T 26-04-2016 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 SUPERFAMILY SSF51905 1 344 5.1E-65 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 2.9E-39 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS17730 5c46978d0c2788de51dce739fcaacd8f 478 PIRSF PIRSF000350 1 471 2.9E-90 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 Gene3D G3DSA:3.30.300.30 391 489 5.3E-10 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 Gene3D G3DSA:3.40.50.980 158 303 2.8E-23 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 PANTHER PTHR24095 22 492 2.5E-66 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 Gene3D G3DSA:3.40.50.980 21 157 6.0E-16 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 SUPERFAMILY SSF56801 11 488 8.11E-89 T 26-04-2016 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 Pfam PF00501 AMP-binding enzyme 21 394 1.2E-52 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS19515 afed3928a10170aa0a447b52154fc4e7 492 Gene3D G3DSA:2.30.38.10 317 388 8.1E-19 T 26-04-2016 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 230 1.1E-75 T 26-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 227 4.8E-64 T 26-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 PANTHER PTHR32125 10 230 1.1E-72 T 26-04-2016 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 26-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 Gene3D G3DSA:3.90.550.10 10 230 1.4E-66 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 231 28.837 T 26-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 PANTHER PTHR32125:SF4 10 230 1.1E-72 T 26-04-2016 PAM18_RS06645 4538316286cb0d538309b29fa925f0d1 234 SUPERFAMILY SSF53448 10 230 8.45E-55 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 254 9.0E-45 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 6 257 5.29E-57 T 26-04-2016 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 PIRSF PIRSF000538 4 513 1.9E-112 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 257 508 9.5E-47 T 26-04-2016 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 PANTHER PTHR10196:SF65 1 516 0.0 T 26-04-2016 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 457 4.9E-29 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 PANTHER PTHR10196 1 516 0.0 T 26-04-2016 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 258 500 8.03E-53 T 26-04-2016 PAM18_RS09950 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 2 255 4.6E-57 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Gene3D G3DSA:3.90.740.10 203 387 1.6E-53 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.216 T 26-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946:SF11 900 940 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946:SF11 6 213 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946:SF11 231 256 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946:SF11 279 881 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Gene3D G3DSA:3.40.50.620 404 642 2.3E-130 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Gene3D G3DSA:3.40.50.620 13 197 2.3E-130 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 849 9.8E-277 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 847 1.0E-27 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946 900 940 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946 6 213 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946 231 256 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PANTHER PTHR11946 279 881 0.0 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Gene3D G3DSA:1.10.730.10 648 795 2.9E-43 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 SUPERFAMILY SSF52374 3 199 1.83E-132 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 SUPERFAMILY SSF52374 401 652 1.83E-132 T 26-04-2016 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 1.3E-230 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 1.9E-7 T 26-04-2016 IPR010663 Zinc finger, FPG/IleRS-type PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.1E-32 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 3.1E-32 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 3.1E-32 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.1E-32 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.1E-32 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 SUPERFAMILY SSF50677 201 401 5.76E-54 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS23780 4750d65b0f347fe25b9901f04d271e25 943 SUPERFAMILY SSF47323 658 934 3.55E-77 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Pfam PF13183 4Fe-4S dicluster domain 367 422 4.0E-8 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 275 3.1E-48 T 26-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PAM18_RS07600 5292438950b90f24addc4730844a5248 769 PANTHER PTHR11780:SF1 7 474 8.6E-240 T 26-04-2016 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 PANTHER PTHR11780 7 474 8.6E-240 T 26-04-2016 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 753 193.387 T 26-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS07600 5292438950b90f24addc4730844a5248 769 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 369 380 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS07600 5292438950b90f24addc4730844a5248 769 SUPERFAMILY SSF142019 87 294 3.66E-56 T 26-04-2016 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 SUPERFAMILY SSF46548 324 437 1.03E-17 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Pfam PF10531 SLBB domain 290 337 2.2E-8 T 26-04-2016 IPR019554 Soluble ligand binding domain PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 106 3.0E-32 T 26-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain PAM18_RS07600 5292438950b90f24addc4730844a5248 769 Gene3D G3DSA:1.10.1060.10 364 441 2.8E-15 T 26-04-2016 PAM18_RS07600 5292438950b90f24addc4730844a5248 769 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 438 1.2E-192 T 26-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 PAM18_RS23540 7683d1d78a61238a0873257b37770f6f 141 PANTHER PTHR36503 3 141 1.9E-73 T 26-04-2016 PAM18_RS23540 7683d1d78a61238a0873257b37770f6f 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 124 2.4E-6 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS23540 7683d1d78a61238a0873257b37770f6f 141 Gene3D G3DSA:3.10.180.10 4 140 3.7E-39 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS23540 7683d1d78a61238a0873257b37770f6f 141 SUPERFAMILY SSF54593 5 134 6.05E-25 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS23540 7683d1d78a61238a0873257b37770f6f 141 PANTHER PTHR36503:SF1 3 141 1.9E-73 T 26-04-2016 PAM18_RS22885 4f82ad207c1c94a146f8577ae9238e70 155 PANTHER PTHR35335 1 155 1.3E-44 T 26-04-2016 PAM18_RS22885 4f82ad207c1c94a146f8577ae9238e70 155 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 1.8E-34 T 26-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PAM18_RS22885 4f82ad207c1c94a146f8577ae9238e70 155 PANTHER PTHR35335:SF1 1 155 1.3E-44 T 26-04-2016 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SUPERFAMILY SSF53150 105 257 9.02E-44 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SUPERFAMILY SSF48334 258 555 6.93E-85 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Gene3D G3DSA:3.30.420.110 117 247 5.3E-45 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Pfam PF01624 MutS domain I 1 110 4.9E-41 T 26-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 PANTHER PTHR11361 1 786 0.0 T 26-04-2016 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SUPERFAMILY SSF55271 1 106 6.67E-40 T 26-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Gene3D G3DSA:3.40.1170.10 1 111 3.1E-48 T 26-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Pfam PF05188 MutS domain II 119 244 4.2E-31 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SMART SM00533 274 581 6.2E-109 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 PANTHER PTHR11361:SF86 1 786 0.0 T 26-04-2016 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SUPERFAMILY SSF52540 559 786 8.86E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Pfam PF05192 MutS domain III 261 549 4.7E-37 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 SMART SM00534 597 783 1.4E-121 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 678 694 - T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Gene3D G3DSA:1.10.1420.10 306 467 9.8E-57 T 26-04-2016 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Gene3D G3DSA:3.40.50.300 559 786 7.5E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Pfam PF05190 MutS family domain IV 418 508 2.9E-29 T 26-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Pfam PF00488 MutS domain V 600 786 5.2E-85 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 843 0.0 T 26-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PAM18_RS06710 ac3b105a6d3a69ce4a2298e89b8acd20 846 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 838 24.903 T 26-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 PAM18_RS19740 5756b2a687f35527ffb3f34ffabc460d 244 PANTHER PTHR30060 1 194 3.5E-50 T 26-04-2016 PAM18_RS19740 5756b2a687f35527ffb3f34ffabc460d 244 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 187 2.7E-70 T 26-04-2016 IPR022301 Integral membrane protein YjbE PAM18_RS19740 5756b2a687f35527ffb3f34ffabc460d 244 Pfam PF03741 Integral membrane protein TerC family 16 186 2.2E-44 T 26-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 202 7.0E-42 T 26-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 SUPERFAMILY SSF56784 2 210 1.58E-34 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 Gene3D G3DSA:1.20.1440.100 15 80 3.1E-31 T 26-04-2016 PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.0E-39 T 26-04-2016 PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 Gene3D G3DSA:3.40.50.1000 81 216 6.0E-52 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 PANTHER PTHR10000:SF10 3 217 4.3E-84 T 26-04-2016 PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 1.6E-26 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PAM18_RS01690 be0548e784309c192ee31b627747bc80 217 PANTHER PTHR10000 3 217 4.3E-84 T 26-04-2016 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 TIGRFAM TIGR00836 amt: ammonium transporter 33 440 1.2E-143 T 26-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 Gene3D G3DSA:1.10.3430.10 27 421 4.8E-142 T 26-04-2016 IPR029020 Ammonium/urea transporter PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 ProSitePatterns PS01219 Ammonium transporters signature. 198 223 - T 26-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 SUPERFAMILY SSF111352 29 421 1.96E-128 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 PANTHER PTHR11730 24 442 3.4E-189 T 26-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 Pfam PF00909 Ammonium Transporter Family 35 440 1.3E-117 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PAM18_RS27630 4866becbc33a9acb30b96cbee01fd8ef 442 PANTHER PTHR11730:SF17 24 442 3.4E-189 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF47831 204 316 7.45E-30 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 620 638 - T 26-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.30.450.40 1 162 2.1E-50 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 SMART SM00065 17 164 4.5E-23 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF01590 GAF domain 17 152 4.3E-15 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 426 713 1.8E-98 T 26-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF55781 2 158 2.4E-32 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PANTHER PTHR22931 200 723 5.7E-288 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF51621 427 715 1.05E-102 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.50.30.10 308 429 4.8E-32 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.20.20.60 430 739 4.2E-103 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 736 1.1E-141 T 26-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF52009 300 420 6.93E-29 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 486 5.9E-24 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 620 635 5.9E-24 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 5.9E-24 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 673 685 5.9E-24 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 180 301 2.6E-27 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 327 399 2.5E-16 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 PANTHER PTHR22931:SF23 200 723 5.7E-288 T 26-04-2016 PAM18_RS01700 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:1.10.274.10 204 307 5.2E-35 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 Gene3D G3DSA:1.10.40.50 275 336 6.1E-22 T 26-04-2016 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 SUPERFAMILY SSF52540 113 334 3.09E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 SUPERFAMILY SSF50249 45 103 6.17E-5 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 338 36.188 T 26-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 PANTHER PTHR32120:SF2 3 334 4.0E-152 T 26-04-2016 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 Gene3D G3DSA:3.40.50.300 113 273 6.3E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 78 330 1.3E-75 T 26-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 Pfam PF03193 Protein of unknown function, DUF258 100 273 8.2E-53 T 26-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 PAM18_RS25915 86c9695ab4e5ad9f0406b6ebe6065f97 339 PANTHER PTHR32120 3 334 4.0E-152 T 26-04-2016 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Gene3D G3DSA:2.40.110.10 162 268 1.4E-26 T 26-04-2016 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Gene3D G3DSA:1.20.140.10 269 461 8.1E-53 T 26-04-2016 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Gene3D G3DSA:1.10.540.10 38 159 1.3E-13 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.1E-16 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 SUPERFAMILY SSF47203 289 473 6.12E-47 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 3.6E-10 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 PANTHER PTHR10909:SF296 1 477 9.6E-277 T 26-04-2016 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 PANTHER PTHR10909 1 477 9.6E-277 T 26-04-2016 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 585 2.7E-35 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 6.6E-12 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 2.5E-21 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02570 35938772c9bcb371eb318f77be128595 592 SUPERFAMILY SSF56645 38 281 8.51E-55 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 9.91E-48 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 9.91E-48 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 9.91E-48 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 9.91E-48 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 9.91E-48 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 Gene3D G3DSA:3.30.572.10 1 264 7.7E-134 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.2E-41 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.6E-96 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 26-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 SUPERFAMILY SSF55831 1 264 2.09E-131 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 Pfam PF00303 Thymidylate synthase 2 264 3.9E-123 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 47.18 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 PAM18_RS01725 89fac71e486e96c45307372683095943 264 PANTHER PTHR11548 1 264 2.0E-196 T 26-04-2016 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.6E-43 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 Gene3D G3DSA:1.20.1330.10 54 171 2.8E-59 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 Gene3D G3DSA:1.20.1330.10 296 350 2.8E-59 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 Pfam PF00700 Bacterial flagellin C-terminal helical region 310 393 9.0E-31 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PANTHER PTHR30244:SF1 241 394 2.4E-135 T 26-04-2016 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PANTHER PTHR30244:SF1 2 179 2.4E-135 T 26-04-2016 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PANTHER PTHR30244 241 394 2.4E-135 T 26-04-2016 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PANTHER PTHR30244 2 179 2.4E-135 T 26-04-2016 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PRINTS PR00207 Flagellin signature 111 134 1.2E-25 T 26-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PRINTS PR00207 Flagellin signature 37 54 1.2E-25 T 26-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 PRINTS PR00207 Flagellin signature 76 95 1.2E-25 T 26-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 PAM18_RS20135 267eb5a122a56a22b96c035016bbc336 394 SUPERFAMILY SSF64518 1 394 9.15E-107 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 SUPERFAMILY SSF52172 13 160 1.2E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 SUPERFAMILY SSF109604 153 353 1.82E-26 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 SMART SM00448 11 124 3.2E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 Gene3D G3DSA:3.40.50.2300 10 135 1.9E-40 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 Pfam PF13487 HD domain 236 305 2.5E-17 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 Pfam PF00072 Response regulator receiver domain 13 124 7.3E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 PANTHER PTHR26402:SF495 169 393 1.5E-77 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 PANTHER PTHR26402:SF495 11 144 1.5E-77 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 Gene3D G3DSA:1.10.3210.10 163 357 1.1E-13 T 26-04-2016 IPR006674 HD domain PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 SMART SM00471 173 324 8.6E-7 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 PANTHER PTHR26402 169 393 1.5E-77 T 26-04-2016 PAM18_RS25040 a3d1037e62e49be08076901e127af33c 393 PANTHER PTHR26402 11 144 1.5E-77 T 26-04-2016 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 Pfam PF00288 GHMP kinases N terminal domain 87 144 3.2E-10 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 Gene3D G3DSA:3.30.70.890 162 278 4.6E-38 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 SUPERFAMILY SSF54211 7 158 1.97E-47 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 PANTHER PTHR20861:SF2 4 277 1.0E-97 T 26-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 Gene3D G3DSA:3.30.230.10 6 159 1.3E-53 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 PANTHER PTHR20861 4 277 1.0E-97 T 26-04-2016 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 271 33.112 T 26-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 Pfam PF08544 GHMP kinases C terminal 203 253 5.6E-5 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 278 2.0E-83 T 26-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 SUPERFAMILY SSF55060 160 277 2.83E-33 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain PAM18_RS24350 e7ce557468f358ee293f5a707d5b0926 282 PIRSF PIRSF010376 3 279 6.0E-87 T 26-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 197 6.8E-38 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 202 7.4E-72 T 26-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 Gene3D G3DSA:3.40.225.10 5 203 9.6E-47 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 SMART SM01007 10 198 5.8E-51 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 116.855 T 26-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 PANTHER PTHR10640 1 204 2.3E-63 T 26-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 PAM18_RS17245 c3acbae2160b001850134e76518f5e73 205 SUPERFAMILY SSF53639 5 203 2.16E-46 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 402 4.5E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF47384 408 502 2.55E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 1.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 1.9E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF08448 PAS fold 294 397 6.6E-9 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00304 185 238 1.4E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00388 412 502 2.6E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF00672 HAMP domain 163 234 4.1E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423 229 248 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423 465 697 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423 285 440 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423 94 161 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF158472 185 234 3.27E-7 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 666 1.8E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00387 550 667 2.5E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:1.10.287.130 411 498 6.4E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 413 499 1.3E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF55785 275 395 4.54E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF55874 506 665 1.7E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:3.30.450.20 287 395 6.7E-15 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00091 287 352 3.8E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:3.30.565.10 505 665 1.8E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423:SF450 229 248 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423:SF450 465 697 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423:SF450 285 440 7.1E-207 T 26-04-2016 PAM18_RS22940 af7f6f3cb1640d9b7d264873b0912800 698 PANTHER PTHR24423:SF450 94 161 7.1E-207 T 26-04-2016 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 SMART SM00304 175 227 1.4E-5 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 SUPERFAMILY SSF47384 212 282 4.71E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 433 5.7E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 Pfam PF00672 HAMP domain 157 223 8.6E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 Gene3D G3DSA:3.30.565.10 294 432 8.4E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 SMART SM00388 228 286 0.0079 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 2.9E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 375 2.9E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 389 2.9E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 SUPERFAMILY SSF55874 292 432 2.36E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PANTHER PTHR24423 169 433 4.5E-88 T 26-04-2016 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PANTHER PTHR24423 98 116 4.5E-88 T 26-04-2016 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 Gene3D G3DSA:1.10.287.130 218 282 1.5E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PANTHER PTHR24423:SF559 169 433 4.5E-88 T 26-04-2016 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 PANTHER PTHR24423:SF559 98 116 4.5E-88 T 26-04-2016 PAM18_RS04265 30084f3b88622aed3556075fc7cb6426 434 SMART SM00387 326 434 1.3E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 SUPERFAMILY SSF53850 89 291 1.79E-49 T 26-04-2016 PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 Gene3D G3DSA:3.40.190.10 92 176 4.5E-24 T 26-04-2016 PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-49 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 PANTHER PTHR30537 1 293 3.6E-182 T 26-04-2016 PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 SUPERFAMILY SSF46785 4 111 1.28E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 Gene3D G3DSA:3.40.190.10 177 255 9.2E-23 T 26-04-2016 PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 PANTHER PTHR30537:SF10 1 293 3.6E-182 T 26-04-2016 PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 Gene3D G3DSA:1.10.10.10 5 86 9.6E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06660 007cdfc97b2e6a008f69cb8834a302a1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.1E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 SUPERFAMILY SSF51735 6 255 1.36E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PANTHER PTHR24322:SF317 11 146 1.9E-57 T 26-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PANTHER PTHR24322:SF317 162 194 1.9E-57 T 26-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PANTHER PTHR24322 11 146 1.9E-57 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PANTHER PTHR24322 162 194 1.9E-57 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 PIRSF PIRSF000094 1 263 1.1E-109 T 26-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 Gene3D G3DSA:3.40.50.720 2 255 7.6E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16585 f7666ac805e1eceeafbb1cc1791bedc5 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 1.2E-83 T 26-04-2016 PAM18_RS25095 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 PANTHER PTHR23344:SF2 1 311 5.7E-170 T 26-04-2016 PAM18_RS25095 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 PANTHER PTHR23344 1 311 5.7E-170 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS25095 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 Gene3D G3DSA:3.20.20.190 20 303 3.7E-50 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS25095 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 SUPERFAMILY SSF51695 29 297 2.43E-45 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS25095 24c2c5ed5a8a9de2a62210e1d6f86aa7 311 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 151 5.4E-17 T 26-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 SUPERFAMILY SSF50486 208 307 4.51E-31 T 26-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 PANTHER PTHR11138 1 305 7.4E-119 T 26-04-2016 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 26-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 Gene3D G3DSA:3.10.25.10 210 310 4.6E-31 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 5.2E-26 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 306 9.6E-95 T 26-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 Pfam PF00551 Formyl transferase 6 184 4.7E-47 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.077 T 26-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 Gene3D G3DSA:3.40.50.170 5 208 1.0E-75 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00090 92763bffa9402148e8b68c83eb7e9aba 314 SUPERFAMILY SSF53328 5 210 5.49E-67 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Gene3D G3DSA:3.40.190.10 92 183 9.5E-25 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Gene3D G3DSA:3.40.190.10 290 299 9.5E-25 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Pfam PF03466 LysR substrate binding domain 96 299 2.4E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Gene3D G3DSA:1.10.10.10 5 88 6.7E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Gene3D G3DSA:3.40.190.10 184 274 2.7E-33 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 PANTHER PTHR30118:SF4 1 299 1.6E-131 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 SUPERFAMILY SSF53850 92 302 1.83E-44 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 5.2E-14 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 PANTHER PTHR30118 1 299 1.6E-131 T 26-04-2016 PAM18_RS02415 8f7acf421624596ce791c9f3e9cc247f 308 SUPERFAMILY SSF46785 5 89 3.74E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.300 143 316 1.2E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.2300 4 126 1.5E-37 T 26-04-2016 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00158 Sigma-54 interaction domain 145 310 4.7E-67 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.10.60 367 436 9.8E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 PANTHER PTHR32071 1 447 6.2E-304 T 26-04-2016 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00072 Response regulator receiver domain 5 113 6.8E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00448 3 114 1.0E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.8.60 317 366 4.3E-21 T 26-04-2016 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52172 5 187 1.85E-43 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52540 144 373 4.49E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 PANTHER PTHR32071:SF40 1 447 6.2E-304 T 26-04-2016 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF02954 Bacterial regulatory protein, Fis family 394 433 1.1E-6 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF46689 355 436 3.76E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28785 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00382 164 307 4.2E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 198 278 8.0E-68 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 7 126 8.0E-68 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 PANTHER PTHR18919:SF110 2 396 1.6E-231 T 26-04-2016 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 PIRSF PIRSF000429 1 396 1.7E-112 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 279 394 4.0E-54 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 145 197 4.0E-54 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 274 394 1.69E-38 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 3.2E-124 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 PANTHER PTHR18919 2 396 1.6E-231 T 26-04-2016 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.3E-86 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF02803 Thiolase, C-terminal domain 273 394 5.4E-41 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS12810 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 7 272 1.56E-77 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 SUPERFAMILY SSF52972 4 195 2.62E-68 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 Gene3D G3DSA:3.90.950.10 3 195 1.9E-76 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 PANTHER PTHR11067:SF9 1 195 5.2E-80 T 26-04-2016 PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 PANTHER PTHR11067 1 195 5.2E-80 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 195 5.8E-57 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 Pfam PF01725 Ham1 family 7 193 9.7E-56 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PAM18_RS01955 d6827c051ee84fd3a703129a7820fd81 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 197 48.73 T 26-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 PAM18_RS05525 527eeaa64bf6a9d4b9ec4d8344c8d174 334 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 1 332 39.909 T 26-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PAM18_RS05525 527eeaa64bf6a9d4b9ec4d8344c8d174 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 6.8E-88 T 26-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 PAM18_RS05525 527eeaa64bf6a9d4b9ec4d8344c8d174 334 PANTHER PTHR38772 1 334 2.5E-182 T 26-04-2016 PAM18_RS13995 b3c028a03cc690c780fb7c33f9388d01 121 Gene3D G3DSA:2.60.120.10 26 118 8.1E-18 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS13995 b3c028a03cc690c780fb7c33f9388d01 121 Pfam PF05899 Protein of unknown function (DUF861) 44 117 7.7E-17 T 26-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS13995 b3c028a03cc690c780fb7c33f9388d01 121 SUPERFAMILY SSF51182 29 117 2.89E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 3.4E-221 T 26-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Pfam PF10415 Fumarase C C-terminus 406 458 1.5E-26 T 26-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.10.275.10 2 136 1.2E-61 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.9E-32 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.9E-32 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.9E-32 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.9E-32 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Pfam PF00206 Lyase 10 340 3.7E-106 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PANTHER PTHR11444:SF1 3 459 2.7E-238 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.5E-6 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 1.5E-6 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.5E-6 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.10.40.30 416 460 1.6E-31 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 SUPERFAMILY SSF48557 3 459 2.67E-155 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 2 460 89.637 T 26-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 Gene3D G3DSA:1.20.200.10 137 415 1.2E-101 T 26-04-2016 PAM18_RS21380 7b3d344d3487058f798a87450317e1a8 464 PANTHER PTHR11444 3 459 2.7E-238 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01565 c59a8eb0c3572d5cfa8eeb2f8afad95f 164 PANTHER PTHR30087:SF1 1 162 8.0E-83 T 26-04-2016 PAM18_RS01565 c59a8eb0c3572d5cfa8eeb2f8afad95f 164 Pfam PF04463 Protein of unknown function (DUF523) 4 149 7.3E-40 T 26-04-2016 IPR007553 Domain of unknown function DUF523 PAM18_RS01565 c59a8eb0c3572d5cfa8eeb2f8afad95f 164 PANTHER PTHR30087 1 162 8.0E-83 T 26-04-2016 PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 SUPERFAMILY SSF51604 127 388 6.55E-69 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 SMART SM00922 159 262 1.8E-22 T 26-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 SUPERFAMILY SSF54826 1 143 1.13E-33 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 139 1.3E-20 T 26-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 Gene3D G3DSA:3.20.20.120 145 379 8.8E-71 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 PANTHER PTHR13794 10 391 3.1E-195 T 26-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 PANTHER PTHR13794:SF50 10 391 3.1E-195 T 26-04-2016 PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 Gene3D G3DSA:3.30.390.10 1 144 5.9E-50 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS14485 59281eb4f290d7e13c4b406166fe3152 391 Pfam PF13378 Enolase C-terminal domain-like 163 382 4.4E-55 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS26665 3f80a628eee4ee4e4d89ad26d001a7b5 265 PANTHER PTHR35841:SF2 1 265 6.1E-114 T 26-04-2016 PAM18_RS26665 3f80a628eee4ee4e4d89ad26d001a7b5 265 SUPERFAMILY SSF53850 56 221 4.09E-9 T 26-04-2016 PAM18_RS26665 3f80a628eee4ee4e4d89ad26d001a7b5 265 PANTHER PTHR35841 1 265 6.1E-114 T 26-04-2016 PAM18_RS26665 3f80a628eee4ee4e4d89ad26d001a7b5 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 55 245 7.1E-16 T 26-04-2016 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Gene3D G3DSA:3.40.1380.20 324 467 5.4E-43 T 26-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 1.2E-149 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Gene3D G3DSA:3.20.20.60 6 75 1.1E-91 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Gene3D G3DSA:3.20.20.60 169 323 1.1E-91 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 SUPERFAMILY SSF50800 73 168 2.09E-25 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 310 326 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 62 78 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 266 290 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 187 201 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 291 309 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 214 240 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PRINTS PR01050 Pyruvate kinase family signature 241 265 8.9E-61 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Gene3D G3DSA:2.40.33.10 76 168 8.1E-29 T 26-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 2.8E-27 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PANTHER PTHR11817:SF3 5 471 2.0E-197 T 26-04-2016 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 26-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 SUPERFAMILY SSF52935 320 470 1.2E-37 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 1.2E-110 T 26-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 SUPERFAMILY SSF51621 157 339 3.84E-91 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 SUPERFAMILY SSF51621 4 77 3.84E-91 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS18595 e6d3d7832378f8e1f57cf7d303b8bb88 477 PANTHER PTHR11817 5 471 2.0E-197 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Gene3D G3DSA:2.30.42.10 271 356 3.2E-16 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 SMART SM00228 264 341 6.7E-5 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 PANTHER PTHR32060:SF11 7 629 1.6E-288 T 26-04-2016 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Gene3D G3DSA:3.30.750.44 211 270 2.1E-5 T 26-04-2016 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 221 576 3.6E-96 T 26-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 PANTHER PTHR32060 7 629 1.6E-288 T 26-04-2016 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 257 337 1.1E-9 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Pfam PF03572 Peptidase family S41 381 554 3.6E-51 T 26-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 560 700 1.3E-36 T 26-04-2016 IPR020992 Tail specific protease, C-terminal PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 SUPERFAMILY SSF52096 375 560 2.15E-69 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 SUPERFAMILY SSF52096 199 282 2.15E-69 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 Gene3D G3DSA:3.90.226.10 357 558 4.9E-60 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 SUPERFAMILY SSF50156 255 339 4.03E-9 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS08795 a6359989cead77fec07b1f90f5afa1d6 709 SMART SM00245 347 556 3.1E-56 T 26-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Gene3D G3DSA:3.30.9.10 116 174 8.4E-11 T 26-04-2016 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Gene3D G3DSA:3.30.9.10 254 343 8.4E-11 T 26-04-2016 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 PANTHER PTHR13847:SF44 1 401 9.8E-73 T 26-04-2016 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 SUPERFAMILY SSF51905 33 254 1.79E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 SUPERFAMILY SSF51905 344 403 1.79E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 PANTHER PTHR13847 1 401 9.8E-73 T 26-04-2016 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 7.6E-234 T 26-04-2016 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 4.2E-54 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Gene3D G3DSA:3.50.50.60 175 253 2.0E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Gene3D G3DSA:3.50.50.60 18 111 2.0E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28300 23f192d36ad3e90ee49e7928a39b668b 416 Gene3D G3DSA:3.50.50.60 344 402 2.0E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05940 cd1b71ae372c128ba3b58eb793ab9a37 525 SUPERFAMILY SSF53328 58 192 6.8E-6 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS05940 cd1b71ae372c128ba3b58eb793ab9a37 525 SUPERFAMILY SSF75005 367 463 1.33E-8 T 26-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PAM18_RS05940 cd1b71ae372c128ba3b58eb793ab9a37 525 Gene3D G3DSA:2.115.10.20 383 467 9.4E-6 T 26-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PAM18_RS23900 07037d3f0eb7ea4e52c5d0401d65e82c 404 PANTHER PTHR11118:SF3 4 404 2.0E-210 T 26-04-2016 PAM18_RS23900 07037d3f0eb7ea4e52c5d0401d65e82c 404 Pfam PF01139 tRNA-splicing ligase RtcB 31 404 4.7E-134 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS23900 07037d3f0eb7ea4e52c5d0401d65e82c 404 SUPERFAMILY SSF103365 7 404 1.7E-141 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS23900 07037d3f0eb7ea4e52c5d0401d65e82c 404 PANTHER PTHR11118 4 404 2.0E-210 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS23900 07037d3f0eb7ea4e52c5d0401d65e82c 404 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 31 60 - T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS22430 9e6fafc5e0348e17317d0dd4cb7298fb 245 PIRSF PIRSF029658 1 245 4.8E-75 T 26-04-2016 IPR016931 Uncharacterised conserved protein UCP029658, TPR PAM18_RS22430 9e6fafc5e0348e17317d0dd4cb7298fb 245 Gene3D G3DSA:1.25.40.10 48 208 1.6E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS22430 9e6fafc5e0348e17317d0dd4cb7298fb 245 SUPERFAMILY SSF48452 53 203 1.63E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SMART SM00388 249 315 2.4E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SUPERFAMILY SSF47384 232 314 1.26E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 468 1.7E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 9.9E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 Pfam PF00672 HAMP domain 177 244 6.0E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 Gene3D G3DSA:3.30.565.10 323 468 2.0E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 Gene3D G3DSA:1.10.287.130 239 308 2.5E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 PANTHER PTHR24423 189 467 8.1E-84 T 26-04-2016 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SMART SM00304 195 248 1.5E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 9.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 9.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 9.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 5 467 2.7E-179 T 26-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SUPERFAMILY SSF55874 305 467 4.58E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SUPERFAMILY SSF158472 198 245 4.84E-7 T 26-04-2016 PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 SMART SM00387 358 470 2.0E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12965 769d80d92fb69dae09dbb364cb9b2559 472 PANTHER PTHR24423:SF354 189 467 8.1E-84 T 26-04-2016 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 Gene3D G3DSA:3.30.70.860 93 159 2.0E-34 T 26-04-2016 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 SUPERFAMILY SSF89963 87 159 4.45E-29 T 26-04-2016 IPR007551 Protein of unknown function DUF520 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 SUPERFAMILY SSF89963 2 85 1.22E-26 T 26-04-2016 IPR007551 Protein of unknown function DUF520 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 PANTHER PTHR30476:SF0 1 159 9.2E-93 T 26-04-2016 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 Pfam PF04461 Protein of unknown function (DUF520) 2 158 9.5E-62 T 26-04-2016 IPR007551 Protein of unknown function DUF520 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 PANTHER PTHR30476 1 159 9.2E-93 T 26-04-2016 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 Gene3D G3DSA:3.30.70.990 9 92 6.4E-27 T 26-04-2016 PAM18_RS22925 5860754cd9c75ce4d036141cdaccdb01 159 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 159 29.074 T 26-04-2016 IPR007551 Protein of unknown function DUF520 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 PANTHER PTHR23508:SF16 13 433 9.3E-221 T 26-04-2016 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 Gene3D G3DSA:1.20.1250.20 246 430 2.4E-20 T 26-04-2016 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 Gene3D G3DSA:1.20.1250.20 23 222 2.0E-19 T 26-04-2016 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 SUPERFAMILY SSF103473 18 432 2.35E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 28 419 5.6E-136 T 26-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 319 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 Pfam PF00083 Sugar (and other) transporter 23 232 2.6E-24 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 Pfam PF00083 Sugar (and other) transporter 234 429 3.6E-13 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS06060 25e134478d3a147650e87144ceeaa649 437 PANTHER PTHR23508 13 433 9.3E-221 T 26-04-2016 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 PANTHER PTHR30154:SF19 1 159 6.3E-113 T 26-04-2016 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 SMART SM00344 4 114 2.0E-43 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 145 1.7E-22 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 SUPERFAMILY SSF54909 64 154 2.95E-20 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 PANTHER PTHR30154 1 159 6.3E-113 T 26-04-2016 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 Gene3D G3DSA:1.10.10.10 5 56 1.1E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 Gene3D G3DSA:3.30.70.920 57 142 2.4E-29 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 26-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.9E-19 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.9E-19 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.9E-19 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 SUPERFAMILY SSF46785 4 94 1.85E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04955 cada28a3e7c5d7508048a67a2463c737 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.2E-23 T 26-04-2016 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00664 ABC transporter transmembrane region 175 436 1.6E-38 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.90.70.10 21 142 5.2E-24 T 26-04-2016 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF52540 483 709 3.27E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 PANTHER PTHR24221:SF138 141 698 2.5E-141 T 26-04-2016 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF90123 163 469 1.11E-56 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 ProSitePatterns PS00211 ABC transporters family signature. 625 639 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.40.50.300 486 711 4.5E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 SMART SM00382 513 697 1.3E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00005 ABC transporter 504 653 1.1E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF03412 Peptidase C39 family 15 143 4.2E-37 T 26-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:1.20.1560.10 168 464 1.4E-63 T 26-04-2016 PAM18_RS04055 e7a7617665bbd96d2eebf210e34772a1 719 PANTHER PTHR24221 141 698 2.5E-141 T 26-04-2016 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:1.10.10.10 125 222 1.6E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 PANTHER PTHR26402 1 223 4.1E-128 T 26-04-2016 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00448 1 113 4.5E-46 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 SUPERFAMILY SSF52172 1 173 2.7E-43 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00072 Response regulator receiver domain 3 113 6.7E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00862 146 220 2.0E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.7E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 PANTHER PTHR26402:SF552 1 223 4.1E-128 T 26-04-2016 PAM18_RS22850 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-42 T 26-04-2016 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF47757 5 71 4.71E-15 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 6 56 2.6E-13 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 1.2E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PANTHER PTHR24422 1 274 1.7E-122 T 26-04-2016 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 SMART SM00138 5 271 4.5E-95 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 268 1.5E-67 T 26-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PANTHER PTHR24422:SF9 1 274 1.7E-122 T 26-04-2016 PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF53335 72 265 3.92E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:1.10.155.10 5 70 9.3E-14 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:3.40.50.150 71 269 4.3E-64 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS08310 0b10ba61fddaca5c0f11b388045f8bc8 274 PIRSF PIRSF000410 1 274 1.4E-75 T 26-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR PAM18_RS28605 41c5a7c0ab6581ca77894934407add6f 186 Gene3D G3DSA:3.40.630.30 25 174 2.1E-14 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS28605 41c5a7c0ab6581ca77894934407add6f 186 Pfam PF00583 Acetyltransferase (GNAT) family 94 168 1.5E-4 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS28605 41c5a7c0ab6581ca77894934407add6f 186 PANTHER PTHR33303 1 183 1.6E-110 T 26-04-2016 PAM18_RS28605 41c5a7c0ab6581ca77894934407add6f 186 PANTHER PTHR33303:SF4 1 183 1.6E-110 T 26-04-2016 PAM18_RS28605 41c5a7c0ab6581ca77894934407add6f 186 SUPERFAMILY SSF55729 28 169 1.44E-17 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS22865 9d2948cb61d1ff78f66b0cade758a56d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 2.5E-24 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PAM18_RS22865 9d2948cb61d1ff78f66b0cade758a56d 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 2.1E-32 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PAM18_RS22865 9d2948cb61d1ff78f66b0cade758a56d 127 PANTHER PTHR28259 1 127 6.9E-41 T 26-04-2016 PAM18_RS22865 9d2948cb61d1ff78f66b0cade758a56d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.042 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 SUPERFAMILY SSF53474 53 296 1.42E-29 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 Gene3D G3DSA:3.40.50.1820 222 311 3.4E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 Gene3D G3DSA:3.40.50.1820 54 181 3.4E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 1.1E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 111 1.1E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 1.1E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 Pfam PF12146 Serine aminopeptidase, S33 67 297 2.3E-30 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS01545 6537e1d018ca979b3e6e99fe119757b9 313 PANTHER PTHR11614 54 305 3.1E-32 T 26-04-2016 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 Gene3D G3DSA:1.10.150.80 222 283 2.6E-4 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 PANTHER PTHR12124:SF42 7 365 7.2E-70 T 26-04-2016 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 SUPERFAMILY SSF47819 199 305 3.49E-29 T 26-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 Hamap MF_01899 Ribonuclease D [rnd]. 8 374 43.314 T 26-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 Pfam PF00570 HRDC domain 217 284 3.2E-17 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 Pfam PF01612 3'-5' exonuclease 8 175 6.0E-39 T 26-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 SMART SM00474 8 176 1.8E-35 T 26-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 SMART SM00341 214 294 6.8E-12 T 26-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 Gene3D G3DSA:3.30.420.10 6 185 2.9E-18 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 PANTHER PTHR12124 7 365 7.2E-70 T 26-04-2016 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 SUPERFAMILY SSF53098 7 214 1.43E-60 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 SUPERFAMILY SSF47819 299 374 9.91E-16 T 26-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 PAM18_RS18475 d0ec63c95a05a39899c158f8aa2c50dc 376 TIGRFAM TIGR01388 rnd: ribonuclease D 10 375 6.0E-157 T 26-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 PAM18_RS17360 e34c814b3577509cf28f48564d9c9092 595 PANTHER PTHR35370:SF4 3 595 0.0 T 26-04-2016 PAM18_RS17360 e34c814b3577509cf28f48564d9c9092 595 PIRSF PIRSF028304 1 595 4.2E-184 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS17360 e34c814b3577509cf28f48564d9c9092 595 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 594 1.9E-180 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS17360 e34c814b3577509cf28f48564d9c9092 595 PANTHER PTHR35370 3 595 0.0 T 26-04-2016 PAM18_RS17360 e34c814b3577509cf28f48564d9c9092 595 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 595 3.2E-182 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 8.0E-124 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 9.5E-228 T 26-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 Pfam PF00474 Sodium:solute symporter family 35 437 9.5E-139 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 PANTHER PTHR11819:SF148 4 487 1.1E-200 T 26-04-2016 PAM18_RS21725 ec6e3a645903d2fa2ee65610947268aa 506 PANTHER PTHR11819 4 487 1.1E-200 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 Gene3D G3DSA:3.40.50.1820 191 295 4.9E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 Gene3D G3DSA:3.40.50.1820 5 147 4.9E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 PANTHER PTHR17630:SF50 230 300 6.7E-80 T 26-04-2016 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 PANTHER PTHR17630:SF50 6 144 6.7E-80 T 26-04-2016 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 12 160 8.6E-15 T 26-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 PANTHER PTHR17630 230 300 6.7E-80 T 26-04-2016 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 PANTHER PTHR17630 6 144 6.7E-80 T 26-04-2016 PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 SUPERFAMILY SSF53474 5 175 5.91E-50 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05625 2fcf1948466b40989b5c0654cc19ca04 307 SUPERFAMILY SSF53474 217 296 5.91E-50 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:3.30.70.260 4 86 2.2E-17 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:3.30.70.260 113 192 4.4E-11 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:1.10.150.210 206 255 6.9E-26 T 26-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Pfam PF13740 ACT domain 3 79 4.1E-26 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 PANTHER PTHR10000 186 401 9.8E-91 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 192 362 1.3E-33 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Gene3D G3DSA:3.40.50.1000 256 382 3.9E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 177 395 1.0E-79 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 PANTHER PTHR10000:SF7 186 401 9.8E-91 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 SUPERFAMILY SSF56784 191 397 2.13E-52 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 Pfam PF12710 haloacid dehalogenase-like hydrolase 193 360 4.5E-25 T 26-04-2016 PAM18_RS25955 8ee53f7349b8bd8c8b5f42d57904e7fb 404 SUPERFAMILY SSF55021 3 83 1.72E-14 T 26-04-2016 PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 Gene3D G3DSA:1.20.1250.20 192 371 1.9E-16 T 26-04-2016 PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 SUPERFAMILY SSF103473 5 372 5.23E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 Pfam PF07690 Major Facilitator Superfamily 8 317 2.9E-42 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 Gene3D G3DSA:1.20.1250.20 4 181 8.0E-30 T 26-04-2016 PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 PANTHER PTHR23501 1 372 8.9E-118 T 26-04-2016 PAM18_RS08545 76f7c421a1db88ba5cff2a0e1fd0ad44 391 PANTHER PTHR23501:SF88 1 372 8.9E-118 T 26-04-2016 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.4E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 SUPERFAMILY SSF53850 92 289 3.09E-36 T 26-04-2016 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 Pfam PF03466 LysR substrate binding domain 91 288 8.8E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 Gene3D G3DSA:3.40.190.10 103 174 2.2E-14 T 26-04-2016 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 Gene3D G3DSA:3.40.190.10 175 257 9.3E-23 T 26-04-2016 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 SUPERFAMILY SSF46785 3 99 1.43E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 PANTHER PTHR30126 2 289 2.6E-196 T 26-04-2016 PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 Gene3D G3DSA:1.10.10.10 3 82 4.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 7 285 4.3E-121 T 26-04-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type PAM18_RS17820 803cc07374402cd45f28d5aabf95a565 293 PANTHER PTHR30126:SF17 2 289 2.6E-196 T 26-04-2016 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 Pfam PF03441 FAD binding domain of DNA photolyase 280 472 1.4E-83 T 26-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 PANTHER PTHR11455 1 474 1.1E-216 T 26-04-2016 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 Pfam PF00875 DNA photolyase 8 170 9.4E-44 T 26-04-2016 IPR006050 DNA photolyase, N-terminal PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 PRINTS PR00147 DNA photolyase signature 330 346 1.1E-22 T 26-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 PRINTS PR00147 DNA photolyase signature 389 403 1.1E-22 T 26-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 PRINTS PR00147 DNA photolyase signature 350 368 1.1E-22 T 26-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 Gene3D G3DSA:3.40.50.620 6 150 8.6E-43 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 SUPERFAMILY SSF52425 6 190 6.8E-51 T 26-04-2016 IPR006050 DNA photolyase, N-terminal PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 330 342 - T 26-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 Gene3D G3DSA:1.10.579.10 291 473 3.0E-78 T 26-04-2016 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 Gene3D G3DSA:1.25.40.80 151 290 3.5E-41 T 26-04-2016 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 PANTHER PTHR11455:SF18 1 474 1.1E-216 T 26-04-2016 PAM18_RS24305 69b0740a81ec2481cbf86166be27b1f9 481 SUPERFAMILY SSF48173 199 473 5.36E-109 T 26-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 PANTHER PTHR23501 1 487 1.5E-190 T 26-04-2016 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 Gene3D G3DSA:1.20.1250.20 6 190 4.5E-29 T 26-04-2016 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 SUPERFAMILY SSF103473 1 199 2.35E-66 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 SUPERFAMILY SSF103473 463 488 2.35E-66 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 SUPERFAMILY SSF103473 245 415 2.35E-66 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 Gene3D G3DSA:1.20.1250.20 464 489 8.9E-21 T 26-04-2016 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 Gene3D G3DSA:1.20.1250.20 263 416 8.9E-21 T 26-04-2016 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 PANTHER PTHR23501:SF7 1 487 1.5E-190 T 26-04-2016 PAM18_RS18365 25498fde42957f78391e7a2a0cc097e5 513 Pfam PF07690 Major Facilitator Superfamily 13 405 6.3E-52 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 Gene3D G3DSA:1.10.357.10 1 193 4.7E-47 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF13977 Bacterial transcriptional repressor 84 193 4.3E-35 T 26-04-2016 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.1E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 PANTHER PTHR30055 1 197 6.8E-131 T 26-04-2016 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF46689 5 79 1.08E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 110.913 T 26-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.5E-77 T 26-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF48498 81 193 9.24E-24 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS28090 894a4a8ebdea7199ed932a840f262df8 197 PANTHER PTHR30055:SF61 1 197 6.8E-131 T 26-04-2016 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 SUPERFAMILY SSF50331 235 324 7.37E-8 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 SUPERFAMILY SSF52540 3 243 2.18E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 6.5E-121 T 26-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 PANTHER PTHR24220:SF123 4 276 9.2E-143 T 26-04-2016 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 Pfam PF12857 TOBE-like domain 270 321 1.1E-11 T 26-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 Pfam PF00005 ABC transporter 18 164 5.2E-38 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 SMART SM00382 27 214 2.9E-20 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 PANTHER PTHR24220 4 276 9.2E-143 T 26-04-2016 PAM18_RS01400 51811d6172f24c50ea8a31660cd5660a 329 Gene3D G3DSA:3.40.50.300 2 237 3.2E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 2.0E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 SUPERFAMILY SSF161098 24 223 7.46E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 PANTHER PTHR30085:SF4 1 244 4.7E-150 T 26-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 Gene3D G3DSA:1.10.3720.10 23 237 8.4E-48 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 9.2E-18 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS18240 65b894414a949f5326416b0e93b66b29 248 PANTHER PTHR30085 1 244 4.7E-150 T 26-04-2016 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 Gene3D G3DSA:1.10.287.990 20 89 1.7E-30 T 26-04-2016 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 4.9E-33 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PANTHER PTHR11404 1 203 1.8E-106 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF54719 88 201 3.27E-43 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 2.8E-37 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-28 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.9E-28 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.9E-28 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-28 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.9E-28 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 PIRSF PIRSF000349 1 203 6.5E-80 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF46609 1 90 1.31E-37 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS23290 5cfe4531640d7a7710ea4d31c0fc9e82 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 26-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 PANTHER PTHR23513 16 448 2.5E-166 T 26-04-2016 PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 SUPERFAMILY SSF103473 36 418 2.88E-49 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 Pfam PF05977 Transmembrane secretion effector 26 543 1.1E-219 T 26-04-2016 IPR010290 Transmembrane secretion effector PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 Gene3D G3DSA:1.20.1250.20 36 222 4.0E-19 T 26-04-2016 PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 Gene3D G3DSA:1.20.1250.20 246 415 1.4E-16 T 26-04-2016 PAM18_RS07715 3b51b0fb2a9223cdaf3fb89f49fed57e 571 PANTHER PTHR23513:SF7 16 448 2.5E-166 T 26-04-2016 PAM18_RS05280 4656ebffd14aa58a4ac5543ae5a9e2a6 317 PANTHER PTHR30273:SF3 7 317 4.3E-152 T 26-04-2016 PAM18_RS05280 4656ebffd14aa58a4ac5543ae5a9e2a6 317 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 3.3E-13 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS05280 4656ebffd14aa58a4ac5543ae5a9e2a6 317 PIRSF PIRSF018266 4 316 6.0E-95 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS05280 4656ebffd14aa58a4ac5543ae5a9e2a6 317 Pfam PF04773 FecR protein 113 204 1.8E-19 T 26-04-2016 IPR006860 FecR protein PAM18_RS05280 4656ebffd14aa58a4ac5543ae5a9e2a6 317 PANTHER PTHR30273 7 317 4.3E-152 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS26030 c83dee9ff949caf6c91cd03453db1bdc 234 PANTHER PTHR10204 1 230 1.6E-166 T 26-04-2016 PAM18_RS26030 c83dee9ff949caf6c91cd03453db1bdc 234 Pfam PF02525 Flavodoxin-like fold 1 207 2.7E-54 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS26030 c83dee9ff949caf6c91cd03453db1bdc 234 Gene3D G3DSA:3.40.50.360 1 226 1.1E-72 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS26030 c83dee9ff949caf6c91cd03453db1bdc 234 PANTHER PTHR10204:SF46 1 230 1.6E-166 T 26-04-2016 PAM18_RS26030 c83dee9ff949caf6c91cd03453db1bdc 234 SUPERFAMILY SSF52218 1 227 2.44E-69 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS27440 a2b8b89f9f2892253cb23d5ee85253a6 252 PANTHER PTHR30060:SF1 1 245 1.1E-129 T 26-04-2016 PAM18_RS27440 a2b8b89f9f2892253cb23d5ee85253a6 252 Pfam PF03741 Integral membrane protein TerC family 14 203 1.7E-50 T 26-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PAM18_RS27440 a2b8b89f9f2892253cb23d5ee85253a6 252 PANTHER PTHR30060 1 245 1.1E-129 T 26-04-2016 PAM18_RS22565 3f480d2857afb1849dd80c82a45f86bf 140 Pfam PF13511 Domain of unknown function (DUF4124) 8 56 2.2E-14 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS06100 f11d2c57f8c784bdf010c26e164d0942 141 SUPERFAMILY SSF54637 16 133 6.95E-36 T 26-04-2016 IPR029069 HotDog domain PAM18_RS06100 f11d2c57f8c784bdf010c26e164d0942 141 Gene3D G3DSA:3.10.129.10 6 128 2.1E-42 T 26-04-2016 IPR029069 HotDog domain PAM18_RS06100 f11d2c57f8c784bdf010c26e164d0942 141 PANTHER PTHR11049 3 141 2.8E-85 T 26-04-2016 PAM18_RS06100 f11d2c57f8c784bdf010c26e164d0942 141 PANTHER PTHR11049:SF8 3 141 2.8E-85 T 26-04-2016 PAM18_RS06100 f11d2c57f8c784bdf010c26e164d0942 141 Pfam PF03061 Thioesterase superfamily 31 103 4.7E-17 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS05390 56ee0c3dff1fdad7a2861dbe6328a0df 131 Pfam PF08859 DGC domain 13 115 4.1E-31 T 26-04-2016 IPR014958 DGC PAM18_RS05390 56ee0c3dff1fdad7a2861dbe6328a0df 131 PIRSF PIRSF037181 1 130 8.0E-53 T 26-04-2016 IPR014958 DGC PAM18_RS05490 71a51dac723704be94b9a32efd0768a2 160 SUPERFAMILY SSF54427 2 133 9.99E-31 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS05490 71a51dac723704be94b9a32efd0768a2 160 Pfam PF12680 SnoaL-like domain 9 110 1.5E-17 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS05490 71a51dac723704be94b9a32efd0768a2 160 Gene3D G3DSA:3.10.450.50 1 123 7.8E-29 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS03970 83cb6250fba3e6df53947062f91597d1 349 PANTHER PTHR30472 7 349 6.4E-172 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS03970 83cb6250fba3e6df53947062f91597d1 349 PANTHER PTHR30472:SF31 7 349 6.4E-172 T 26-04-2016 PAM18_RS03970 83cb6250fba3e6df53947062f91597d1 349 SUPERFAMILY SSF81345 14 343 9.15E-75 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS03970 83cb6250fba3e6df53947062f91597d1 349 Gene3D G3DSA:1.10.3470.10 14 344 2.6E-90 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS03970 83cb6250fba3e6df53947062f91597d1 349 Pfam PF01032 FecCD transport family 31 343 1.7E-83 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS20370 73eb7f97c65cd71f1475c578c6df03ab 112 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 102 8.4E-26 T 26-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PAM18_RS20370 73eb7f97c65cd71f1475c578c6df03ab 112 PANTHER PTHR34583:SF1 1 112 1.1E-72 T 26-04-2016 PAM18_RS20370 73eb7f97c65cd71f1475c578c6df03ab 112 PANTHER PTHR34583 1 112 1.1E-72 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 PANTHER PTHR30469:SF0 1 381 6.0E-187 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 370 1.6E-73 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 Gene3D G3DSA:2.40.50.100 179 211 5.2E-20 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 Gene3D G3DSA:2.40.50.100 71 104 5.2E-20 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 SUPERFAMILY SSF111369 62 298 1.31E-52 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 PANTHER PTHR30469 1 381 6.0E-187 T 26-04-2016 PAM18_RS18910 1ce8882650a934b66640cbb41962119f 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 291 8.7E-19 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 Gene3D G3DSA:1.20.1290.10 3 145 6.5E-56 T 26-04-2016 IPR029032 AhpD-like PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 SUPERFAMILY SSF69118 6 145 3.27E-49 T 26-04-2016 IPR029032 AhpD-like PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 6.5E-24 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 76 9.7E-17 T 26-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 PANTHER PTHR34846:SF2 11 145 3.5E-14 T 26-04-2016 PAM18_RS01345 5c371130eba8bc943471d8b584150dfe 145 PANTHER PTHR34846 11 145 3.5E-14 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 PANTHER PTHR30126:SF6 1 309 5.6E-214 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF03466 LysR substrate binding domain 89 264 8.0E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 PANTHER PTHR30126 1 309 5.6E-214 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 90 183 4.0E-22 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 184 260 1.6E-27 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:1.10.10.10 1 82 8.2E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF53850 90 321 7.7E-42 T 26-04-2016 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.9E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16885 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF46785 1 112 6.01E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26890 0a4dd163821799c0111b28db6b5e5e11 132 Pfam PF12568 Acetyltransferase (GNAT) domain 2 100 2.1E-31 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS26890 0a4dd163821799c0111b28db6b5e5e11 132 SUPERFAMILY SSF55729 7 125 5.23E-13 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS26890 0a4dd163821799c0111b28db6b5e5e11 132 Gene3D G3DSA:3.40.630.30 12 126 4.0E-13 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 PANTHER PTHR11048:SF20 1 283 1.5E-149 T 26-04-2016 PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 Pfam PF01040 UbiA prenyltransferase family 19 266 3.4E-57 T 26-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 17.448 T 26-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 PANTHER PTHR11048 1 283 1.5E-149 T 26-04-2016 PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 26-04-2016 IPR030470 UbiA prenyltransferase conserved site PAM18_RS18340 663000ea249daa0e8e0b6fa48708ff5b 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 4.8E-88 T 26-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01193 4 134 2.0E-92 T 26-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF51604 143 427 3.14E-129 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-58 T 26-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 26-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Hamap MF_00318 Enolase [eno]. 2 415 44.578 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01192 143 429 1.2E-221 T 26-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PIRSF PIRSF001400 1 429 1.7E-192 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.7E-205 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PANTHER PTHR11902 1 429 1.6E-278 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF54826 3 138 1.69E-56 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 426 1.8E-137 T 26-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 338 352 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 367 384 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 315 326 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.30.390.10 3 126 7.2E-55 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS06635 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.20.20.120 128 427 4.0E-138 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 PANTHER PTHR13847 7 447 6.4E-267 T 26-04-2016 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 PANTHER PTHR13847:SF208 7 447 6.4E-267 T 26-04-2016 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 Pfam PF01266 FAD dependent oxidoreductase 35 396 5.2E-53 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 SUPERFAMILY SSF51905 359 413 2.85E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 SUPERFAMILY SSF51905 34 259 2.85E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 Gene3D G3DSA:3.50.50.60 29 125 1.3E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 Gene3D G3DSA:3.50.50.60 179 258 1.3E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16005 9a59729ac5bf1ea2d7ff263377ce65d2 466 Gene3D G3DSA:3.50.50.60 359 404 1.3E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26440 a116e7fe727122180ca8d6e3e5f14531 123 PANTHER PTHR35303:SF1 1 123 3.4E-82 T 26-04-2016 PAM18_RS26440 a116e7fe727122180ca8d6e3e5f14531 123 Pfam PF06155 Protein of unknown function (DUF971) 7 88 7.0E-24 T 26-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PAM18_RS26440 a116e7fe727122180ca8d6e3e5f14531 123 PANTHER PTHR35303 1 123 3.4E-82 T 26-04-2016 PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 SMART SM00450 209 306 1.3E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 PANTHER PTHR30353:SF6 1 311 2.4E-207 T 26-04-2016 PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 SUPERFAMILY SSF52821 192 308 3.8E-20 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 Pfam PF09335 SNARE associated Golgi protein 29 155 5.2E-14 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 Gene3D G3DSA:3.40.250.10 201 307 4.9E-16 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 Pfam PF00581 Rhodanese-like domain 209 302 1.1E-8 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS19545 c09abf35cb0ad3e3321bf16f992eae49 311 PANTHER PTHR30353 1 311 2.4E-207 T 26-04-2016 IPR032818 DedA family PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.40.50.1820 1822 2109 2.8E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF00501 AMP-binding enzyme 457 847 5.1E-77 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF52777 21 192 7.11E-10 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF53335 1067 1152 2.66E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF53335 917 1029 2.66E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096 1208 1283 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096 440 915 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096 318 382 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:1.10.1200.10 1262 1323 1.3E-22 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.40.50.980 603 760 2.6E-30 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 477 872 7.6E-103 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096:SF247 1208 1283 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096:SF247 440 915 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 PANTHER PTHR24096:SF247 318 382 2.5E-242 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF05050 Methyltransferase FkbM domain 950 1147 1.9E-13 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 ProSitePatterns PS00455 Putative AMP-binding domain signature. 593 604 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.40.50.150 1067 1165 1.7E-27 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.40.50.150 938 1032 1.7E-27 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF53474 1874 2111 4.13E-41 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF56801 1192 1269 7.2E-124 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF56801 414 906 7.2E-124 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SMART SM00824 Thioesterase 1889 2111 1.3E-4 T 26-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:2.30.38.10 761 841 2.0E-19 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SMART SM00823 Phosphopantetheine attachment site 1792 1843 0.11 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SMART SM00823 Phosphopantetheine attachment site 1257 1325 0.0078 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF52777 1550 1779 1.09E-39 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF00550 Phosphopantetheine attachment site 1794 1855 2.4E-5 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF00550 Phosphopantetheine attachment site 1259 1321 2.3E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF47336 1792 1854 3.04E-6 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.30.300.30 1197 1261 4.6E-33 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.30.300.30 843 904 4.6E-33 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF52777 1355 1561 1.09E-37 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF47336 1250 1321 2.88E-16 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1815 1830 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF00975 Thioesterase domain 1887 2107 1.5E-32 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 SUPERFAMILY SSF52777 201 418 6.56E-9 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 947 1122 4.3E-28 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Gene3D G3DSA:3.40.50.980 449 602 1.5E-32 T 26-04-2016 PAM18_RS14075 b0da883ac764df810274f9bf0834a2a3 2125 Pfam PF00668 Condensation domain 1359 1656 7.9E-44 T 26-04-2016 IPR001242 Condensation domain PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 Gene3D G3DSA:2.30.110.10 11 190 4.0E-58 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 SMART SM00903 19 174 2.5E-15 T 26-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 PANTHER PTHR33798 1 201 6.4E-107 T 26-04-2016 PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 SUPERFAMILY SSF50475 2 198 1.46E-42 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 Pfam PF01613 Flavin reductase like domain 22 165 4.8E-18 T 26-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PAM18_RS17440 54f21cfbc0539312f49ace7b1b700d31 202 PANTHER PTHR33798:SF1 1 201 6.4E-107 T 26-04-2016 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Gene3D G3DSA:3.90.600.10 330 422 1.3E-35 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 26-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 SMART SM01209 102 295 1.9E-140 T 26-04-2016 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 295 2.1E-82 T 26-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.1E-179 T 26-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Gene3D G3DSA:3.30.470.20 190 327 7.2E-61 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 SMART SM01210 329 422 7.3E-55 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 SUPERFAMILY SSF52440 1 102 1.18E-34 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 43.431 T 26-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 SUPERFAMILY SSF56059 103 319 5.13E-64 T 26-04-2016 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Gene3D G3DSA:3.30.1490.20 120 189 9.4E-34 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 SUPERFAMILY SSF51246 328 423 1.94E-33 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 6.8E-30 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Gene3D G3DSA:3.40.50.20 2 94 9.9E-37 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 2.9E-33 T 26-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS25420 145b1556049cb4b0ed6ff8774a3dd83e 429 PANTHER PTHR10520 1 425 8.8E-286 T 26-04-2016 PAM18_RS18410 106cfaec7969c6f80029b25f3a08d723 257 PANTHER PTHR11907 1 252 4.6E-119 T 26-04-2016 PAM18_RS18410 106cfaec7969c6f80029b25f3a08d723 257 PANTHER PTHR11907:SF10 1 252 4.6E-119 T 26-04-2016 PAM18_RS18410 106cfaec7969c6f80029b25f3a08d723 257 Pfam PF13230 Glutamine amidotransferases class-II 1 254 6.8E-107 T 26-04-2016 IPR026869 Putative glutamine amidotransferase type 2 PAM18_RS18410 106cfaec7969c6f80029b25f3a08d723 257 SUPERFAMILY SSF56235 2 251 8.93E-49 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS18410 106cfaec7969c6f80029b25f3a08d723 257 Gene3D G3DSA:3.60.20.10 1 251 6.1E-63 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 5.6E-159 T 26-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 PIRSF PIRSF000151 1 421 2.9E-182 T 26-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Pfam PF00171 Aldehyde dehydrogenase family 14 283 4.2E-14 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Pfam PF00171 Aldehyde dehydrogenase family 311 377 9.8E-6 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Gene3D G3DSA:3.40.309.10 229 378 1.2E-41 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Gene3D G3DSA:3.40.605.10 379 420 1.1E-106 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Gene3D G3DSA:3.40.605.10 4 227 1.1E-106 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 PANTHER PTHR11063:SF8 1 420 1.0E-187 T 26-04-2016 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 PANTHER PTHR11063 1 420 1.0E-187 T 26-04-2016 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 26-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 SUPERFAMILY SSF53720 8 420 6.02E-122 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS04745 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 42.798 T 26-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Pfam PF03484 tRNA synthetase B5 domain 404 471 2.6E-17 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 1.2E-258 T 26-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 PANTHER PTHR10947 2 791 0.0 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.30.56.20 402 475 9.6E-24 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SUPERFAMILY SSF55681 467 683 4.77E-53 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 7.3E-31 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SUPERFAMILY SSF50249 39 190 2.08E-49 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.30.930.10 496 687 5.1E-65 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SUPERFAMILY SSF54991 692 791 2.09E-32 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.30.56.10 1 38 2.9E-22 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.30.56.10 154 183 2.9E-22 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Pfam PF03483 B3/4 domain 211 383 1.8E-70 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SMART SM00873 211 384 2.1E-95 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 PANTHER PTHR10947:SF0 2 791 0.0 T 26-04-2016 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SMART SM00896 698 791 1.9E-46 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SUPERFAMILY SSF46955 403 475 8.33E-18 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.50.40.10 197 392 5.6E-82 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SMART SM00874 402 471 1.8E-27 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 46.947 T 26-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.2E-24 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:2.40.50.140 40 153 6.3E-46 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 SUPERFAMILY SSF56037 195 394 1.8E-74 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAM18_RS11485 74a8c373afb03c6dc0cf109ccda5e8e7 792 Gene3D G3DSA:3.30.70.380 700 791 1.8E-32 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 Gene3D G3DSA:1.10.10.10 11 106 2.0E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 Pfam PF12840 Helix-turn-helix domain 14 86 2.1E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 SMART SM00418 15 106 9.8E-12 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 SUPERFAMILY SSF46785 7 105 4.75E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 PANTHER PTHR33154 12 106 1.6E-24 T 26-04-2016 PAM18_RS22710 8bb9577b1c058c7b1de0a1c8e0019a2d 108 PANTHER PTHR33154:SF6 12 106 1.6E-24 T 26-04-2016 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PANTHER PTHR11739:SF12 11 375 1.2E-170 T 26-04-2016 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 Gene3D G3DSA:1.10.230.10 238 322 6.1E-30 T 26-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 26-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 Gene3D G3DSA:1.10.580.10 17 237 1.5E-78 T 26-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PANTHER PTHR11739 11 375 1.2E-170 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 308 324 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 198 226 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 176 191 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 328 342 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 126 139 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PRINTS PR00143 Citrate synthase signature 251 271 7.5E-41 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 4.5E-120 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 SUPERFAMILY SSF48256 10 375 3.01E-128 T 26-04-2016 IPR002020 Citrate synthase GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 2.2E-155 T 26-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 PAM18_RS21660 fa6870b8677116753a305164fb034d74 375 PIRSF PIRSF001369 3 375 1.4E-119 T 26-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 Gene3D G3DSA:3.90.550.10 8 281 1.6E-88 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 PANTHER PTHR12526 161 299 1.4E-199 T 26-04-2016 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 PANTHER PTHR12526 362 479 1.4E-199 T 26-04-2016 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 Pfam PF00483 Nucleotidyl transferase 9 296 2.8E-59 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 Gene3D G3DSA:2.60.120.10 367 482 1.9E-42 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 SUPERFAMILY SSF51182 191 480 3.09E-79 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 SUPERFAMILY SSF53448 8 292 3.07E-67 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 7 479 3.2E-173 T 26-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 PANTHER PTHR12526:SF357 161 299 1.4E-199 T 26-04-2016 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 PANTHER PTHR12526:SF357 362 479 1.4E-199 T 26-04-2016 PAM18_RS14425 9fe3ebfdbf963babbf695906caa3630d 488 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 1.8E-63 T 26-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 SUPERFAMILY SSF51215 36 187 3.79E-32 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 SUPERFAMILY SSF46689 203 246 1.16E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 Pfam PF12833 Helix-turn-helix domain 220 299 1.1E-15 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.7E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.7E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 SUPERFAMILY SSF46689 251 301 1.93E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 Gene3D G3DSA:1.10.10.60 205 248 8.6E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 Pfam PF02311 AraC-like ligand binding domain 47 184 3.7E-28 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 Gene3D G3DSA:1.10.10.60 250 300 2.4E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 Gene3D G3DSA:2.60.120.280 33 188 5.3E-31 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 PANTHER PTHR11019 52 305 1.3E-39 T 26-04-2016 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 SMART SM00342 214 297 8.7E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07285 eae5c6231d0ec3dcfd003eef83d9c24e 307 PANTHER PTHR11019:SF50 52 305 1.3E-39 T 26-04-2016 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 Pfam PF12833 Helix-turn-helix domain 252 329 8.0E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 PANTHER PTHR11019 7 330 4.4E-105 T 26-04-2016 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 PANTHER PTHR11019:SF52 7 330 4.4E-105 T 26-04-2016 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 SUPERFAMILY SSF46689 281 330 1.43E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 SMART SM00342 245 328 1.7E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 2.2E-48 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 Gene3D G3DSA:1.10.10.60 281 330 4.9E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.1E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS19680 0eda2b1763a91bf1579b93b903a8368d 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.1E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09700 761a900ce21399455b61731ba85d8baf 362 Gene3D G3DSA:3.40.50.1820 57 255 2.2E-17 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09700 761a900ce21399455b61731ba85d8baf 362 SUPERFAMILY SSF53474 28 256 8.17E-22 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09700 761a900ce21399455b61731ba85d8baf 362 Pfam PF12740 Chlorophyllase enzyme 64 192 9.9E-14 T 26-04-2016 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164|UniPathway: UPA00674 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PRINTS PR01171 Bacterial lipocalin signature 170 180 2.1E-10 T 26-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PRINTS PR01171 Bacterial lipocalin signature 143 154 2.1E-10 T 26-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.1E-10 T 26-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.1E-10 T 26-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PIRSF PIRSF036893 4 189 1.7E-55 T 26-04-2016 IPR022271 Lipocalin, ApoD type PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 Pfam PF08212 Lipocalin-like domain 34 179 2.0E-60 T 26-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 SUPERFAMILY SSF50814 18 183 2.03E-45 T 26-04-2016 IPR011038 Calycin-like PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 PANTHER PTHR10612 21 178 1.4E-44 T 26-04-2016 PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 Gene3D G3DSA:2.40.128.20 6 178 7.0E-53 T 26-04-2016 IPR012674 Calycin PAM18_RS26695 8b42ab465ccde8b55f8e1960dfa610d4 189 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 26-04-2016 IPR022272 Lipocalin family conserved site PAM18_RS02470 6031880cf40b8c57af39ba0cedca4ac1 106 PANTHER PTHR35462:SF1 2 106 8.8E-61 T 26-04-2016 PAM18_RS02470 6031880cf40b8c57af39ba0cedca4ac1 106 PIRSF PIRSF034456 1 106 1.7E-53 T 26-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 PAM18_RS02470 6031880cf40b8c57af39ba0cedca4ac1 106 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 23 101 1.0E-6 T 26-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein PAM18_RS02470 6031880cf40b8c57af39ba0cedca4ac1 106 PANTHER PTHR35462 2 106 8.8E-61 T 26-04-2016 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 ProSitePatterns PS00356 LacI-type HTH domain signature. 37 55 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF46689 2 76 2.87E-20 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 PANTHER PTHR30514:SF1 1 293 5.8E-101 T 26-04-2016 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:1.10.10.10 2 77 4.0E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:3.40.50.10490 97 263 3.8E-32 T 26-04-2016 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF53697 84 278 2.43E-37 T 26-04-2016 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 76 1.5E-23 T 26-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 PANTHER PTHR30514 1 293 5.8E-101 T 26-04-2016 PAM18_RS28415 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01380 SIS domain 125 252 2.5E-16 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS17165 0411a17e62df32878b095aefb6ec9be4 288 SUPERFAMILY SSF140591 68 263 6.67E-55 T 26-04-2016 PAM18_RS17165 0411a17e62df32878b095aefb6ec9be4 288 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 30 276 1.9E-74 T 26-04-2016 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 PAM18_RS17165 0411a17e62df32878b095aefb6ec9be4 288 Pfam PF07201 HrpJ-like domain 54 217 1.2E-38 T 26-04-2016 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 PANTHER PTHR13847 1 424 1.7E-262 T 26-04-2016 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 PANTHER PTHR13847:SF210 1 424 1.7E-262 T 26-04-2016 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 2.9E-54 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 SUPERFAMILY SSF51905 345 413 1.6E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 SUPERFAMILY SSF51905 30 253 1.6E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 Gene3D G3DSA:3.50.50.60 17 120 5.2E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 Gene3D G3DSA:3.50.50.60 345 393 5.2E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11230 b666014f94ff497fc859c18cc29e1f14 427 Gene3D G3DSA:3.50.50.60 173 252 5.2E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SUPERFAMILY SSF55073 336 492 1.57E-48 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Pfam PF00563 EAL domain 507 742 8.7E-76 T 26-04-2016 IPR001633 EAL domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SUPERFAMILY SSF55785 211 318 1.93E-29 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Pfam PF08447 PAS fold 104 192 1.4E-21 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Gene3D G3DSA:3.30.450.20 202 314 4.5E-30 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 PANTHER PTHR10799 191 336 1.2E-101 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 PANTHER PTHR10799 364 601 1.2E-101 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00052 501 747 8.1E-121 T 26-04-2016 IPR001633 EAL domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Gene3D G3DSA:3.30.450.20 59 201 5.0E-31 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00086 156 198 8.7E-10 T 26-04-2016 IPR001610 PAC motif PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00086 278 320 3.1E-5 T 26-04-2016 IPR001610 PAC motif PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SUPERFAMILY SSF141868 506 749 3.66E-88 T 26-04-2016 IPR001633 EAL domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00091 206 272 3.4E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00091 81 149 6.1E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 209 327 3.3E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 197 1.3E-11 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SUPERFAMILY SSF55785 87 199 3.32E-21 T 26-04-2016 IPR000014 PAS domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 489 1.9E-40 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Pfam PF00989 PAS fold 209 316 1.4E-15 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 SMART SM00267 320 491 4.0E-61 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Gene3D G3DSA:3.20.20.450 504 748 1.3E-98 T 26-04-2016 IPR001633 EAL domain PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Gene3D G3DSA:3.30.70.270 332 496 1.9E-54 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 PANTHER PTHR10799:SF710 191 336 1.2E-101 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 PANTHER PTHR10799:SF710 364 601 1.2E-101 T 26-04-2016 PAM18_RS01425 03cd8f3c7fa6348af6625ecc90acd28a 760 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 486 4.9E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS09785 1f2549aabae0ba2729555dede68e015d 158 Gene3D G3DSA:1.10.260.40 5 58 1.6E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS09785 1f2549aabae0ba2729555dede68e015d 158 Pfam PF13560 Helix-turn-helix domain 11 58 9.2E-8 T 26-04-2016 PAM18_RS09785 1f2549aabae0ba2729555dede68e015d 158 SUPERFAMILY SSF47413 9 61 4.02E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS09785 1f2549aabae0ba2729555dede68e015d 158 SMART SM00530 13 68 0.0036 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF53850 92 293 3.98E-27 T 26-04-2016 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:1.10.10.10 7 87 2.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 PANTHER PTHR30126 5 307 1.1E-177 T 26-04-2016 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF03466 LysR substrate binding domain 92 290 1.1E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:3.40.190.10 180 256 1.5E-10 T 26-04-2016 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:3.40.190.10 88 179 1.5E-6 T 26-04-2016 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 PANTHER PTHR30126:SF19 5 307 1.1E-177 T 26-04-2016 PAM18_RS08955 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF46785 5 87 1.03E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 Gene3D G3DSA:1.10.10.60 22 73 1.6E-20 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 Gene3D G3DSA:1.10.357.10 74 205 1.3E-37 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 41 72 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 8.2E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 8.2E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 5.6E-16 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 SUPERFAMILY SSF46689 20 100 1.55E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 SUPERFAMILY SSF48498 96 204 4.36E-14 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 PANTHER PTHR30055 13 205 1.6E-91 T 26-04-2016 PAM18_RS10660 588e984f8b733fc3dd2843d4164a616a 207 PANTHER PTHR30055:SF56 13 205 1.6E-91 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF55785 75 175 5.76E-6 T 26-04-2016 IPR000014 PAS domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00091 345 411 6.1E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF55874 552 722 3.14E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 497 559 1.5E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF55781 171 337 2.4E-15 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 342 463 1.3E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:3.30.565.10 548 724 6.5E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00448 742 850 1.8E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Pfam PF08448 PAS fold 74 171 1.5E-7 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Pfam PF08448 PAS fold 351 458 1.4E-11 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:3.30.450.20 342 456 2.4E-23 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423 343 471 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423 492 858 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423 61 184 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423:SF438 343 471 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423:SF438 492 858 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PANTHER PTHR24423:SF438 61 184 5.7E-253 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:3.40.50.2300 741 856 1.4E-28 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00086 126 169 26.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00086 414 456 3.2E-7 T 26-04-2016 IPR001610 PAC motif PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 1.5E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 1.5E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 719 1.5E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 1.5E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF55785 334 454 2.62E-22 T 26-04-2016 IPR000014 PAS domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Pfam PF00072 Response regulator receiver domain 744 850 7.1E-17 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00387 602 722 1.7E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF52172 741 855 7.97E-28 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:1.10.287.130 491 547 1.4E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:3.30.450.20 64 171 2.0E-10 T 26-04-2016 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 604 720 3.7E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SMART SM00388 496 561 4.8E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 SUPERFAMILY SSF47384 490 558 4.32E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19375 3215352d15ceb6f9dc635bf522f8a18d 858 Gene3D G3DSA:3.30.450.40 172 341 1.3E-11 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 Gene3D G3DSA:3.40.50.1270 175 371 4.3E-82 T 26-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 26-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 Pfam PF00162 Phosphoglycerate kinase 6 373 5.4E-139 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 Gene3D G3DSA:3.40.50.1260 5 174 7.2E-63 T 26-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 SUPERFAMILY SSF53748 4 383 2.59E-144 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PIRSF PIRSF000724 1 387 3.8E-132 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PANTHER PTHR11406 1 386 1.6E-200 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.967 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS02795 193e3ac28e2cda951fddc81f32dce19d 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.2E-80 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 SMART SM00052 408 648 5.8E-12 T 26-04-2016 IPR001633 EAL domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 390 4.7E-27 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 PANTHER PTHR33121:SF10 406 645 4.8E-30 T 26-04-2016 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 SMART SM00267 225 398 3.3E-31 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 SUPERFAMILY SSF141868 414 647 3.14E-46 T 26-04-2016 IPR001633 EAL domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 2.4E-41 T 26-04-2016 IPR032244 LapD/MoxY, periplasmic domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 389 8.7E-19 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 SUPERFAMILY SSF55073 241 391 6.83E-26 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Gene3D G3DSA:3.30.70.270 238 393 1.6E-29 T 26-04-2016 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 PANTHER PTHR33121 406 645 4.8E-30 T 26-04-2016 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 SMART SM00304 171 223 8.9E-7 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Pfam PF00672 HAMP domain 152 219 1.3E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Gene3D G3DSA:3.20.20.450 412 646 1.1E-42 T 26-04-2016 IPR001633 EAL domain PAM18_RS18920 036158475386e1523b171e0c529ff6b9 650 Pfam PF00563 EAL domain 416 643 5.4E-49 T 26-04-2016 IPR001633 EAL domain PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:1.10.10.10 6 66 6.1E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 8.9E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 8.9E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PANTHER PTHR11751 9 72 4.8E-39 T 26-04-2016 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PANTHER PTHR11751 119 142 4.8E-39 T 26-04-2016 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF46785 5 73 5.54E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 Pfam PF07702 UTRA domain 90 227 4.8E-36 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 3.0E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF64288 57 232 1.43E-44 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 SMART SM00345 12 69 1.8E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PANTHER PTHR11751:SF333 9 72 4.8E-39 T 26-04-2016 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 PANTHER PTHR11751:SF333 119 142 4.8E-39 T 26-04-2016 PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:3.40.1410.10 67 233 7.2E-43 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS11090 391d2b014a1181bc977ccd04845ad314 239 SMART SM00866 90 229 1.3E-33 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 Pfam PF00355 Rieske [2Fe-2S] domain 37 121 1.1E-18 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 80 103 - T 26-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 157 410 6.4E-17 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 SUPERFAMILY SSF55961 155 413 1.33E-49 T 26-04-2016 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 22 47 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 52 67 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 73 93 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 5.5E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 Gene3D G3DSA:2.102.10.10 21 145 5.6E-22 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PANTHER PTHR21266:SF30 13 216 2.2E-87 T 26-04-2016 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 SUPERFAMILY SSF50022 8 150 2.88E-42 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 Gene3D G3DSA:3.90.380.10 146 415 5.0E-69 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS15185 2964de1e1831d201c0bb874d79e036e2 424 PANTHER PTHR21266 13 216 2.2E-87 T 26-04-2016 PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 9 256 40.16 T 26-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 PANTHER PTHR36112 1 261 5.6E-143 T 26-04-2016 PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 Gene3D G3DSA:3.40.50.150 65 256 3.7E-77 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 SUPERFAMILY SSF53335 14 256 6.68E-75 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 Pfam PF04445 Putative SAM-dependent methyltransferase 33 254 8.8E-93 T 26-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 PAM18_RS06410 b13620a6bd4ece89f2058d6abb843781 261 PANTHER PTHR36112:SF1 1 261 5.6E-143 T 26-04-2016 PAM18_RS06790 5d89a4d81974d60d7bdd153735a4d8f7 129 SUPERFAMILY SSF46894 15 79 3.74E-13 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS06790 5d89a4d81974d60d7bdd153735a4d8f7 129 Gene3D G3DSA:1.10.10.10 17 78 2.7E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06790 5d89a4d81974d60d7bdd153735a4d8f7 129 Pfam PF00196 Bacterial regulatory proteins, luxR family 18 70 3.4E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06790 5d89a4d81974d60d7bdd153735a4d8f7 129 SMART SM00421 15 72 2.7E-6 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS08655 b960d21614f1dce344a2b29ad5c98b2f 196 PANTHER PTHR33452 3 121 6.7E-105 T 26-04-2016 PAM18_RS08655 b960d21614f1dce344a2b29ad5c98b2f 196 PANTHER PTHR33452 160 196 6.7E-105 T 26-04-2016 PAM18_RS08655 b960d21614f1dce344a2b29ad5c98b2f 196 Pfam PF07681 DoxX 23 108 1.1E-22 T 26-04-2016 IPR032808 DoxX family PAM18_RS08655 b960d21614f1dce344a2b29ad5c98b2f 196 PANTHER PTHR33452:SF5 3 121 6.7E-105 T 26-04-2016 PAM18_RS08655 b960d21614f1dce344a2b29ad5c98b2f 196 PANTHER PTHR33452:SF5 160 196 6.7E-105 T 26-04-2016 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 201 246 1.97E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 PANTHER PTHR11019:SF77 21 301 1.7E-88 T 26-04-2016 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:1.10.10.60 254 299 2.8E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 SMART SM00342 215 297 3.8E-27 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12852 Cupin 11 182 3.1E-30 T 26-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12833 Helix-turn-helix domain 221 298 2.2E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 PANTHER PTHR11019 21 301 1.7E-88 T 26-04-2016 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.0E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.0E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 251 299 1.97E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13930 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:1.10.10.60 207 253 2.1E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 Pfam PF00106 short chain dehydrogenase 9 197 3.2E-41 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PANTHER PTHR24322:SF639 156 187 4.7E-47 T 26-04-2016 PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PANTHER PTHR24322:SF639 12 140 4.7E-47 T 26-04-2016 PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.9E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.9E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.9E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.9E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PANTHER PTHR24322 156 187 4.7E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PANTHER PTHR24322 12 140 4.7E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PIRSF PIRSF000126 1 263 5.4E-72 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 SUPERFAMILY SSF51735 5 229 1.08E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.9E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.9E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 Gene3D G3DSA:3.40.50.720 9 223 3.5E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25305 5ce7f62898b578880bda85ec535f9c82 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0083 T 26-04-2016 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 SMART SM00382 387 578 1.1E-22 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:3.40.50.300 362 597 6.0E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF52540 351 602 2.66E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00664 ABC transporter transmembrane region 42 301 1.2E-14 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 PANTHER PTHR24221:SF203 3 606 0.0 T 26-04-2016 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 PANTHER PTHR24221 3 606 0.0 T 26-04-2016 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00005 ABC transporter 379 532 2.0E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:1.20.1560.10 32 335 8.6E-34 T 26-04-2016 PAM18_RS08940 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF90123 31 343 2.88E-48 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 Gene3D G3DSA:1.10.1740.10 5 88 9.2E-7 T 26-04-2016 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 Pfam PF04542 Sigma-70 region 2 17 73 2.2E-4 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 SUPERFAMILY SSF88946 2 72 7.06E-9 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 Gene3D G3DSA:1.10.10.10 105 167 7.3E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 Pfam PF08281 Sigma-70, region 4 109 161 1.2E-13 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 159 5.5E-18 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 SUPERFAMILY SSF88659 92 170 1.61E-11 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 PANTHER PTHR30173:SF30 1 167 2.3E-77 T 26-04-2016 PAM18_RS22280 d75cc267031b0d99454994de0d85c50d 181 PANTHER PTHR30173 1 167 2.3E-77 T 26-04-2016 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF00199 Catalase 8 390 3.9E-187 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 SMART SM01060 8 393 2.5E-283 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 SUPERFAMILY SSF56634 3 481 3.79E-211 T 26-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF06628 Catalase-related immune-responsive 418 477 1.2E-20 T 26-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 26-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 105 122 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 124 142 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 21 44 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 289 316 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 321 347 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 84 102 2.4E-71 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PIRSF PIRSF038928 1 482 1.3E-221 T 26-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 26-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 Gene3D G3DSA:2.40.180.10 3 357 2.2E-175 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS03560 07dd5d23b964a2d7151e58d18875ad23 482 PANTHER PTHR11465 3 480 1.5E-295 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Gene3D G3DSA:1.20.1600.10 349 463 1.8E-88 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Gene3D G3DSA:1.20.1600.10 138 311 1.8E-88 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Gene3D G3DSA:1.20.1600.10 50 87 1.8E-88 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 SUPERFAMILY SSF56954 4 464 3.53E-90 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Pfam PF02321 Outer membrane efflux protein 61 249 2.7E-20 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Pfam PF02321 Outer membrane efflux protein 282 460 5.1E-20 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 462 4.7E-91 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Gene3D G3DSA:2.20.200.10 109 137 3.5E-7 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 Gene3D G3DSA:2.20.200.10 312 345 3.5E-7 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 PANTHER PTHR30203 1 481 2.6E-236 T 26-04-2016 PAM18_RS07540 64a62085175fe89cd476378d98dfd0ed 491 PANTHER PTHR30203:SF13 1 481 2.6E-236 T 26-04-2016 PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 44 352 1.1E-133 T 26-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 PANTHER PTHR30482:SF4 1 95 2.5E-201 T 26-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 PANTHER PTHR30482:SF4 117 359 2.5E-201 T 26-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 PANTHER PTHR30482 1 95 2.5E-201 T 26-04-2016 PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 PANTHER PTHR30482 117 359 2.5E-201 T 26-04-2016 PAM18_RS25445 82a0a3a82b5a2f31cd241979216ac6b7 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 341 1.5E-41 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS14985 e28e119f5eb8eac92c62f07714644e02 375 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 223 366 1.5E-23 T 26-04-2016 IPR019587 Polyketide cyclase/dehydrase PAM18_RS14985 e28e119f5eb8eac92c62f07714644e02 375 SUPERFAMILY SSF55961 223 368 1.62E-18 T 26-04-2016 PAM18_RS14985 e28e119f5eb8eac92c62f07714644e02 375 Gene3D G3DSA:3.30.530.20 223 366 1.3E-5 T 26-04-2016 IPR023393 START-like domain PAM18_RS14985 e28e119f5eb8eac92c62f07714644e02 375 Pfam PF04116 Fatty acid hydroxylase superfamily 57 210 1.4E-10 T 26-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.5E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.5E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.20.120.530 96 238 6.3E-26 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF48008 96 237 2.62E-26 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PANTHER PTHR11751 93 115 6.8E-46 T 26-04-2016 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PANTHER PTHR11751 12 77 6.8E-46 T 26-04-2016 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00345 15 74 4.9E-25 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PANTHER PTHR11751:SF355 93 115 6.8E-46 T 26-04-2016 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 PANTHER PTHR11751:SF355 12 77 6.8E-46 T 26-04-2016 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00895 99 230 2.6E-21 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF46785 6 76 1.04E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF07729 FCD domain 99 229 6.0E-27 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.6E-22 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS24975 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.10.10.10 7 76 2.6E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 PANTHER PTHR30006:SF6 12 326 7.4E-115 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 PIRSF PIRSF002825 12 334 1.1E-82 T 26-04-2016 IPR026045 Ferric binding protein PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 268 322 3.5E-33 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 11 126 3.5E-33 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 PANTHER PTHR30006 12 326 7.4E-115 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 Pfam PF13343 Bacterial extracellular solute-binding protein 82 313 1.1E-27 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 130 267 2.5E-52 T 26-04-2016 PAM18_RS24520 89e6394f85bed0c70c6631416d5d5bfc 335 SUPERFAMILY SSF53850 27 323 1.34E-72 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 7.6E-58 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 302 387 3.2E-15 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.1E-24 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.7E-286 T 26-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.240 401 478 2.1E-30 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.30.10 206 302 3.4E-26 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.40.50.300 3 205 1.0E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00679 Elongation factor G C-terminus 397 477 1.5E-21 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.3E-10 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF50447 151 299 1.79E-31 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.50.250 483 577 1.6E-37 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 398 512 1.82E-25 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PANTHER PTHR23115 3 602 1.6E-302 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PANTHER PTHR23115:SF14 3 602 1.6E-302 T 26-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF52540 3 219 3.85E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.870 303 400 2.8E-38 T 26-04-2016 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.143548E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.143548E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.143548E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.143548E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.143548E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS26745 b02d05907a991cc2e7dab4889effe0b5 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 14 477 5.7E-238 T 26-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 32 142 4.8E-38 T 26-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:1.10.1060.10 15 157 4.9E-44 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 464 4.5E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.50.50.60 245 405 1.3E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF46548 15 165 9.94E-39 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF51971 153 406 2.0E-70 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.40.50.720 158 244 8.4E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.40.50.720 406 475 8.4E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PANTHER PTHR11938 33 475 6.4E-291 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PANTHER PTHR11938:SF93 33 475 6.4E-291 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 221 231 7.9E-36 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 156 178 7.9E-36 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 7.9E-36 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 179 192 7.9E-36 T 26-04-2016 PAM18_RS26340 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 331 344 7.9E-36 T 26-04-2016 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Gene3D G3DSA:2.40.30.10 549 589 2.2E-11 T 26-04-2016 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Gene3D G3DSA:2.40.30.10 651 716 2.2E-11 T 26-04-2016 PAM18_RS23515 02105450830067427afd80bc8133af87 850 SUPERFAMILY SSF63380 539 709 1.67E-24 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Gene3D G3DSA:3.40.50.360 382 530 3.6E-38 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 682 691 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 579 589 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 786 802 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 654 661 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 718 737 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 809 817 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 742 751 2.3E-12 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PANTHER PTHR19384 344 850 1.7E-106 T 26-04-2016 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Pfam PF00258 Flavodoxin 393 522 6.2E-25 T 26-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Gene3D G3DSA:3.40.50.80 717 849 5.7E-38 T 26-04-2016 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Pfam PF00175 Oxidoreductase NAD-binding domain 719 823 5.8E-12 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 Pfam PF03929 PepSY-associated TM region 6 366 8.0E-59 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00369 Flavodoxin signature 471 481 5.4E-6 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00369 Flavodoxin signature 392 405 5.4E-6 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 PRINTS PR00369 Flavodoxin signature 440 451 5.4E-6 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS23515 02105450830067427afd80bc8133af87 850 SUPERFAMILY SSF52218 388 531 8.6E-38 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS23515 02105450830067427afd80bc8133af87 850 SUPERFAMILY SSF52343 707 850 3.93E-36 T 26-04-2016 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 Pfam PF00534 Glycosyl transferases group 1 191 349 1.3E-27 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 PANTHER PTHR12526 58 371 1.3E-46 T 26-04-2016 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 PANTHER PTHR12526:SF373 58 371 1.3E-46 T 26-04-2016 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 Gene3D G3DSA:3.40.50.2000 189 349 2.5E-22 T 26-04-2016 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 SUPERFAMILY SSF53756 25 372 3.3E-67 T 26-04-2016 PAM18_RS09320 5b5e3b40f85d9f1f2f5d1af723f36cf3 376 Pfam PF13477 Glycosyl transferase 4-like 5 154 1.1E-22 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS23380 270580b789722b01220fc646a97333d6 128 Gene3D G3DSA:1.20.1290.10 6 123 1.2E-39 T 26-04-2016 IPR029032 AhpD-like PAM18_RS23380 270580b789722b01220fc646a97333d6 128 PANTHER PTHR33570:SF2 8 127 2.3E-59 T 26-04-2016 PAM18_RS23380 270580b789722b01220fc646a97333d6 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 1.9E-26 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS23380 270580b789722b01220fc646a97333d6 128 SUPERFAMILY SSF69118 5 119 2.09E-39 T 26-04-2016 IPR029032 AhpD-like PAM18_RS23380 270580b789722b01220fc646a97333d6 128 PANTHER PTHR33570 8 127 2.3E-59 T 26-04-2016 PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 PIRSF PIRSF036407 1 344 3.4E-113 T 26-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 1.3E-19 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 PANTHER PTHR10256 1 335 2.4E-159 T 26-04-2016 PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 343 6.4E-33 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 Gene3D G3DSA:3.30.1330.10 38 158 1.1E-30 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 Gene3D G3DSA:3.90.650.10 172 343 3.8E-17 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 311 3.4E-134 T 26-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 SUPERFAMILY SSF56042 163 339 3.59E-50 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 SUPERFAMILY SSF55326 6 158 1.7E-38 T 26-04-2016 PAM18_RS17455 1e4f24254ce16f88d0a55cc62d5ca431 344 Hamap MF_00625 Selenide, water dikinase [selD]. 4 344 44.911 T 26-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 35 131 3.53E-9 T 26-04-2016 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 PANTHER PTHR22911 3 286 1.4E-72 T 26-04-2016 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 PANTHER PTHR22911:SF27 3 286 1.4E-72 T 26-04-2016 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 5.5E-90 T 26-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 3 128 1.0E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 139 277 2.7E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS07670 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 176 282 1.7E-9 T 26-04-2016 PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 Pfam PF00753 Metallo-beta-lactamase superfamily 42 257 1.9E-26 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 Gene3D G3DSA:3.60.15.10 4 271 6.3E-43 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 PANTHER PTHR23200:SF41 3 286 4.0E-119 T 26-04-2016 PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 SMART SM00849 43 257 1.8E-22 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 SUPERFAMILY SSF56281 3 270 1.97E-40 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS03770 cfc00172bf3b937a3d2489a1bd67b5ee 288 PANTHER PTHR23200 3 286 4.0E-119 T 26-04-2016 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 PANTHER PTHR22939:SF78 204 450 2.4E-90 T 26-04-2016 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 SMART SM00228 211 280 3.2E-8 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 SMART SM00228 114 186 8.4E-6 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 SUPERFAMILY SSF50156 208 290 1.97E-16 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 450 4.8E-124 T 26-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 Gene3D G3DSA:2.30.42.10 206 293 5.5E-17 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 Pfam PF02163 Peptidase family M50 11 437 1.3E-83 T 26-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 Pfam PF13180 PDZ domain 227 289 6.7E-10 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 SUPERFAMILY SSF50156 87 181 9.2E-15 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 Gene3D G3DSA:2.30.42.10 95 192 1.4E-16 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS06565 18d12e302dfb80e48d6ae26d7c1ad71a 450 PANTHER PTHR22939 204 450 2.4E-90 T 26-04-2016 PAM18_RS15850 d2c932155b068fe21d9038a617ab1ed3 226 Pfam PF03412 Peptidase C39 family 47 178 6.2E-21 T 26-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PAM18_RS15850 d2c932155b068fe21d9038a617ab1ed3 226 Gene3D G3DSA:3.90.70.10 56 180 1.5E-11 T 26-04-2016 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 SUPERFAMILY SSF81606 7 241 2.75E-60 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 PANTHER PTHR13832 1 241 1.6E-40 T 26-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 SMART SM00331 13 242 3.1E-27 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 PANTHER PTHR13832:SF278 1 241 1.6E-40 T 26-04-2016 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 SMART SM00332 4 240 9.7E-29 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 Pfam PF13672 Protein phosphatase 2C 18 202 3.8E-15 T 26-04-2016 PAM18_RS17310 193f1ef1a21c341bcfa0f6313ea233ba 242 Gene3D G3DSA:3.60.40.10 8 241 1.6E-61 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Gene3D G3DSA:3.40.50.720 1 201 8.2E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 PIRSF PIRSF000124 1 442 2.1E-143 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Gene3D G3DSA:3.40.50.720 235 447 1.5E-71 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.2E-62 T 26-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.0E-36 T 26-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 PANTHER PTHR11374:SF18 1 447 8.6E-261 T 26-04-2016 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 PIRSF PIRSF500134 1 445 4.5E-178 T 26-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 SUPERFAMILY SSF51735 1 195 9.86E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 SMART SM00984 320 427 3.6E-46 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 423 1.3E-132 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 PANTHER PTHR11374 1 447 8.6E-261 T 26-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 SUPERFAMILY SSF52413 312 437 2.62E-36 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 SUPERFAMILY SSF48179 204 301 1.05E-31 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 426 9.1E-29 T 26-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 PAM18_RS15495 f5a0b79b23a9820b6c1f6449bca6fc0e 453 Gene3D G3DSA:1.20.5.100 204 231 1.0E-16 T 26-04-2016 PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 PANTHER PTHR11260:SF325 1 203 1.7E-118 T 26-04-2016 PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 SUPERFAMILY SSF52833 1 95 3.53E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 PANTHER PTHR11260 1 203 1.7E-118 T 26-04-2016 PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 SUPERFAMILY SSF47616 69 200 7.48E-8 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 Gene3D G3DSA:3.40.30.10 1 95 7.8E-19 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS05550 7f4e7ea3f17e4f070d3cfb624a1b47d2 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 3.0E-20 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:3.30.43.10 2 95 6.9E-28 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 8.1E-66 T 26-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 Pfam PF01565 FAD binding domain 41 179 2.2E-37 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:1.10.45.10 422 461 1.5E-13 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 PANTHER PTHR11748:SF76 1 464 2.8E-240 T 26-04-2016 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 PANTHER PTHR11748 1 464 2.8E-240 T 26-04-2016 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 SUPERFAMILY SSF56176 4 217 1.26E-65 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 SUPERFAMILY SSF55103 222 463 1.54E-60 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS01590 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:3.30.465.10 96 217 1.7E-38 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348 163 245 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348 264 309 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348 6 134 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 Gene3D G3DSA:3.20.20.410 2 292 9.3E-89 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348:SF7 163 245 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348:SF7 264 309 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 PANTHER PTHR30348:SF7 6 134 1.6E-156 T 26-04-2016 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 Pfam PF01904 Protein of unknown function DUF72 24 288 6.2E-67 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 SUPERFAMILY SSF117396 6 135 3.01E-79 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS14795 a7f28d05845712beca1f411698211cce 312 SUPERFAMILY SSF117396 163 291 3.01E-79 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 SUPERFAMILY SSF69279 10 184 7.94E-57 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 2.5E-202 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 PANTHER PTHR32305 1 663 0.0 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 511 5.6E-122 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 8.6E-78 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 PANTHER PTHR32305:SF11 1 663 0.0 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 Gene3D G3DSA:3.55.50.10 95 189 1.2E-36 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 SUPERFAMILY SSF69255 371 459 4.97E-34 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 Gene3D G3DSA:2.40.50.230 378 459 4.1E-40 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 SUPERFAMILY SSF69349 449 631 1.65E-40 T 26-04-2016 PAM18_RS08590 690b4a51ca236cfaea37f24485733663 688 SUPERFAMILY SSF69279 191 371 8.33E-42 T 26-04-2016 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 8.2E-98 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 4.5E-92 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 PANTHER PTHR30304 1 351 2.8E-125 T 26-04-2016 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 Gene3D G3DSA:3.20.20.70 1 335 1.7E-109 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 SUPERFAMILY SSF51569 3 328 7.77E-107 T 26-04-2016 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 PIRSF PIRSF001359 1 329 1.1E-83 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PAM18_RS02810 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.1E-217 T 26-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 PANTHER PTHR30055:SF73 4 172 3.8E-47 T 26-04-2016 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.4E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.4E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 Gene3D G3DSA:1.10.357.10 3 209 8.1E-43 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF48498 82 209 2.0E-39 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF46689 4 74 3.28E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.0E-15 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10040 926d1f4405dc0193cea5c601961b432d 233 PANTHER PTHR30055 4 172 3.8E-47 T 26-04-2016 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 PANTHER PTHR21708:SF24 2 315 1.7E-71 T 26-04-2016 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 PANTHER PTHR21708 2 315 1.7E-71 T 26-04-2016 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 157 6.4E-38 T 26-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 188 310 9.2E-26 T 26-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 Gene3D G3DSA:3.40.50.720 4 183 1.8E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 SUPERFAMILY SSF48179 188 311 5.1E-28 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 SUPERFAMILY SSF51735 7 162 3.47E-13 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 Gene3D G3DSA:1.10.1040.10 188 312 4.5E-28 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS16895 1c6150e58a284cd68e89bee37d2f41f0 315 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 313 1.5E-85 T 26-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS09015 9539e6e3a5c5d5c9b40e153467cdfc05 312 PANTHER PTHR36698:SF2 2 312 1.1E-129 T 26-04-2016 PAM18_RS09015 9539e6e3a5c5d5c9b40e153467cdfc05 312 Pfam PF02470 MlaD protein 39 116 4.8E-11 T 26-04-2016 IPR003399 Mce/MlaD PAM18_RS09015 9539e6e3a5c5d5c9b40e153467cdfc05 312 SUPERFAMILY SSF58104 159 295 5.75E-5 T 26-04-2016 PAM18_RS09015 9539e6e3a5c5d5c9b40e153467cdfc05 312 PANTHER PTHR36698 2 312 1.1E-129 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 PANTHER PTHR12216:SF3 9 555 0.0 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 26-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 26-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 SUPERFAMILY SSF111326 8 555 3.79E-264 T 26-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 PIRSF PIRSF001423 3 559 1.0E-297 T 26-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 51.041 T 26-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 PANTHER PTHR12216 9 555 0.0 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.50.10730 142 349 4.7E-97 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.1770.10 8 141 3.8E-164 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.1770.10 360 555 3.8E-164 T 26-04-2016 PAM18_RS26660 394d8212089590c79caf150cb2475e0a 559 Pfam PF01175 Urocanase 12 547 1.2E-263 T 26-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 Pfam PF00227 Proteasome subunit 2 171 5.8E-21 T 26-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 173 41.314 T 26-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 SUPERFAMILY SSF56235 2 173 1.87E-55 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 PIRSF PIRSF039093 1 176 3.4E-84 T 26-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 173 4.6E-84 T 26-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 PANTHER PTHR32194 2 174 1.2E-122 T 26-04-2016 PAM18_RS26430 552271922f69bbeac47858b4d9079e14 177 Gene3D G3DSA:3.60.20.10 2 174 1.2E-81 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:1.10.730.10 628 815 1.8E-66 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:3.40.50.620 606 627 1.4E-142 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:3.40.50.620 361 568 1.4E-142 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:3.40.50.620 3 190 1.4E-142 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 2.5E-216 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Pfam PF08264 Anticodon-binding domain of tRNA 671 823 1.2E-43 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 947 1.5E-19 T 26-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF52374 606 638 2.5E-137 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF52374 1 189 2.5E-137 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF52374 361 568 2.5E-137 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF50677 188 362 2.35E-59 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946 605 859 0.0 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946 879 943 0.0 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946 1 567 0.0 T 26-04-2016 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:1.10.287.380 877 942 1.1E-8 T 26-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 948 16.171 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF47323 639 898 1.7E-70 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 Gene3D G3DSA:3.90.740.10 191 356 1.5E-47 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 1.1E-35 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 1.1E-35 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.1E-35 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 1.1E-35 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 1.1E-35 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 930 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 SUPERFAMILY SSF46589 883 947 9.94E-18 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946:SF5 605 859 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946:SF5 879 943 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS05600 04d42b5eae8bfbf6ff76a0e21d33ce42 950 PANTHER PTHR11946:SF5 1 567 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 SUPERFAMILY SSF53213 285 359 5.49E-5 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 Pfam PF13379 NMT1-like family 38 279 5.8E-44 T 26-04-2016 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 Gene3D G3DSA:3.40.190.10 134 259 2.4E-7 T 26-04-2016 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 SUPERFAMILY SSF53850 42 276 8.54E-35 T 26-04-2016 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 PANTHER PTHR30024:SF16 1 280 9.4E-172 T 26-04-2016 PAM18_RS13950 af77637df312c178fe39d59e289140bf 399 PANTHER PTHR30024 1 280 9.4E-172 T 26-04-2016 PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 1.6E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PANTHER PTHR24322 47 175 1.8E-72 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PANTHER PTHR24322 191 223 1.8E-72 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PANTHER PTHR24322:SF105 47 175 1.8E-72 T 26-04-2016 PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PANTHER PTHR24322:SF105 191 223 1.8E-72 T 26-04-2016 PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 Gene3D G3DSA:3.40.50.720 39 284 4.4E-88 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 43 228 0.0071 T 26-04-2016 PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 9.7E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 9.7E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 9.7E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 6.1E-66 T 26-04-2016 PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 SUPERFAMILY SSF51735 41 284 2.1E-86 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14875 71795c07c96c6df75f5327870909fe77 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS20925 94b9197786cebf118b44e0c7724f6dfd 108 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 6 90 4.7E-27 T 26-04-2016 IPR009778 Modulator of Rho-dependent transcription termination PAM18_RS20925 94b9197786cebf118b44e0c7724f6dfd 108 SUPERFAMILY SSF101744 1 90 3.71E-20 T 26-04-2016 IPR023534 Rof/RNase P-like PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 Gene3D G3DSA:3.40.1190.20 2 305 3.9E-100 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PANTHER PTHR10584:SF166 1 304 1.6E-100 T 26-04-2016 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PRINTS PR00990 Ribokinase signature 219 230 4.7E-36 T 26-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PRINTS PR00990 Ribokinase signature 7 28 4.7E-36 T 26-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PRINTS PR00990 Ribokinase signature 34 53 4.7E-36 T 26-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PRINTS PR00990 Ribokinase signature 175 190 4.7E-36 T 26-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PRINTS PR00990 Ribokinase signature 106 119 4.7E-36 T 26-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 PANTHER PTHR10584 1 304 1.6E-100 T 26-04-2016 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 Pfam PF00294 pfkB family carbohydrate kinase 3 296 1.0E-74 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 301 9.6E-120 T 26-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 PAM18_RS15865 bc618e5fb0719655a3e916a30d3d13ab 308 SUPERFAMILY SSF53613 3 303 1.18E-89 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.7E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 SUPERFAMILY SSF53850 88 294 1.61E-47 T 26-04-2016 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 PANTHER PTHR30537 1 297 7.9E-122 T 26-04-2016 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 Pfam PF03466 LysR substrate binding domain 88 292 4.2E-48 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 Gene3D G3DSA:1.10.10.10 4 88 2.6E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 PANTHER PTHR30537:SF5 1 297 7.9E-122 T 26-04-2016 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 Gene3D G3DSA:3.40.190.10 178 261 8.3E-26 T 26-04-2016 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 Gene3D G3DSA:3.40.190.10 92 177 1.3E-23 T 26-04-2016 PAM18_RS12845 4e9c7e8c4512c613e0272018785963a6 301 SUPERFAMILY SSF46785 4 111 2.4E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 Gene3D G3DSA:1.10.10.60 208 254 8.3E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 5.2E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 5.2E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 Gene3D G3DSA:1.10.10.60 151 207 6.5E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 PANTHER PTHR11019 23 260 5.8E-115 T 26-04-2016 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 Pfam PF02311 AraC-like ligand binding domain 26 92 8.4E-7 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 SMART SM00342 171 253 5.2E-24 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 SUPERFAMILY SSF51182 5 180 3.26E-18 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 Gene3D G3DSA:2.60.120.10 21 89 2.1E-13 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 PANTHER PTHR11019:SF99 23 260 5.8E-115 T 26-04-2016 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 Pfam PF12833 Helix-turn-helix domain 177 254 1.1E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS17670 10bfe365431308ce8370e0d619a0441a 260 SUPERFAMILY SSF46689 207 256 2.11E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 195 2.8E-52 T 26-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 Gene3D G3DSA:3.40.50.300 3 206 4.0E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 30.132 T 26-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 Pfam PF02223 Thymidylate kinase 8 195 3.7E-48 T 26-04-2016 PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 SUPERFAMILY SSF52540 3 207 1.65E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10265 afa623817ec950b60b55ce359572eff8 210 PANTHER PTHR10344 3 210 9.3E-69 T 26-04-2016 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 SUPERFAMILY SSF51556 3 258 1.45E-79 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 Gene3D G3DSA:3.20.20.140 1 258 1.3E-81 T 26-04-2016 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 Pfam PF01026 TatD related DNase 4 256 2.1E-66 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 PIRSF PIRSF005902 1 259 3.4E-70 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS07325 c93ae1a6db61a01946d996340d62cd3d 259 PANTHER PTHR10060 1 259 1.2E-88 T 26-04-2016 IPR001130 TatD family GO:0016788 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 SUPERFAMILY SSF47203 289 474 7.89E-40 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Gene3D G3DSA:1.10.540.10 34 157 2.5E-16 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 SUPERFAMILY SSF56645 36 281 4.58E-51 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 451 1.5E-17 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Gene3D G3DSA:1.20.140.10 274 459 5.5E-46 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 PANTHER PTHR10909 1 374 2.8E-290 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 PANTHER PTHR10909 391 477 2.8E-290 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 8 34 4.5E-8 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.1E-14 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Gene3D G3DSA:2.40.110.10 160 273 5.2E-24 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 PANTHER PTHR10909:SF269 1 374 2.8E-290 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 PANTHER PTHR10909:SF269 391 477 2.8E-290 T 26-04-2016 PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 595 8.2E-33 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS26265 8c8b440aac3ee04cb2fc436ad0f9b0e5 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 156 3.0E-10 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 Pfam PF00196 Bacterial regulatory proteins, luxR family 204 258 1.9E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 SMART SM00421 203 260 1.2E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 Gene3D G3DSA:1.10.10.10 204 262 6.8E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 PANTHER PTHR26402:SF572 206 264 3.1E-16 T 26-04-2016 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 SUPERFAMILY SSF46894 200 262 2.28E-15 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 220 236 4.8E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 248 4.8E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 220 4.8E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25165 c28fa10501773f484910072959df6f4b 272 PANTHER PTHR26402 206 264 3.1E-16 T 26-04-2016 PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 251 2.3E-25 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 258 5.6E-70 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 PANTHER PTHR22748:SF9 3 265 5.1E-178 T 26-04-2016 PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 257 2.8E-70 T 26-04-2016 PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 30 39 - T 26-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 SUPERFAMILY SSF56219 4 258 4.19E-79 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 Gene3D G3DSA:3.60.10.10 3 259 7.2E-80 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS03910 280daa8a23348cbc3cb51a7832b264ec 266 PANTHER PTHR22748 3 265 5.1E-178 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PANTHER PTHR30487:SF0 59 288 2.9E-119 T 26-04-2016 PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PANTHER PTHR30487:SF0 2 38 2.9E-119 T 26-04-2016 PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 1.5E-26 T 26-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 1.5E-26 T 26-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 1.5E-26 T 26-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 1.5E-26 T 26-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PANTHER PTHR30487 59 288 2.9E-119 T 26-04-2016 PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 PANTHER PTHR30487 2 38 2.9E-119 T 26-04-2016 PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 126 6.7E-33 T 26-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS23600 6db7849a6ef3b2fae8086de213ef029f 290 Pfam PF01478 Type IV leader peptidase family 137 245 1.8E-24 T 26-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 PANTHER PTHR30173:SF1 1 193 2.8E-57 T 26-04-2016 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88946 1 108 1.38E-32 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 5.7E-31 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88659 123 187 7.85E-18 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF04542 Sigma-70 region 2 25 92 1.1E-17 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.1740.10 2 112 1.6E-37 T 26-04-2016 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 190 6.9E-99 T 26-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF08281 Sigma-70, region 4 132 181 2.9E-18 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.10.10 123 188 2.3E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 PANTHER PTHR30173 1 193 2.8E-57 T 26-04-2016 PAM18_RS21830 86dda65e985ac48ceba67694921bb7c1 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 26-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 Pfam PF00296 Luciferase-like monooxygenase 1 324 6.7E-94 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 PANTHER PTHR30011:SF1 1 376 4.4E-211 T 26-04-2016 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 SUPERFAMILY SSF51679 1 349 4.58E-103 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 Gene3D G3DSA:3.20.20.30 285 349 3.6E-108 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 Gene3D G3DSA:3.20.20.30 1 251 3.6E-108 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 PANTHER PTHR30011 1 376 4.4E-211 T 26-04-2016 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 1.1E-193 T 26-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PAM18_RS13810 f9ac66e40d01e6fced391587831a9192 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 379 72.07 T 26-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 5.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 5.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 5.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 5.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 5.0E-12 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.1780.10 1 147 1.6E-41 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.8.60 776 853 8.9E-30 T 26-04-2016 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 198 343 2.1E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 597 765 4.0E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PANTHER PTHR11638 1 853 0.0 T 26-04-2016 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SMART SM01086 764 853 1.4E-36 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 PANTHER PTHR11638:SF18 1 853 0.0 T 26-04-2016 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 1.8E-55 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 546 852 1.67E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 159 545 2.51E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.8.60 344 428 1.0E-37 T 26-04-2016 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 26-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 550 775 6.3E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 160 342 2.8E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 842 2.9E-25 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-12 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.2E-9 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS23685 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF81923 4 155 1.96E-38 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 PAM18_RS20410 84fac98e0b220772ede9e9a089a33525 293 PANTHER PTHR30128 64 286 4.5E-51 T 26-04-2016 PAM18_RS20410 84fac98e0b220772ede9e9a089a33525 293 Pfam PF00691 OmpA family 195 274 1.3E-13 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20410 84fac98e0b220772ede9e9a089a33525 293 Gene3D G3DSA:3.30.1330.60 160 279 1.3E-24 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20410 84fac98e0b220772ede9e9a089a33525 293 PANTHER PTHR30128:SF11 64 286 4.5E-51 T 26-04-2016 PAM18_RS20410 84fac98e0b220772ede9e9a089a33525 293 SUPERFAMILY SSF103088 168 280 6.28E-26 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 Gene3D G3DSA:2.40.50.100 213 246 4.5E-11 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 Gene3D G3DSA:2.40.50.100 49 82 4.5E-11 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 Pfam PF13533 Biotin-lipoyl like 50 96 2.5E-13 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 SUPERFAMILY SSF111369 186 284 2.35E-6 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 SUPERFAMILY SSF111369 43 123 3.4E-9 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 Pfam PF13437 HlyD family secretion protein 216 319 2.4E-13 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 PANTHER PTHR30438 1 357 3.4E-137 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 PANTHER PTHR30438:SF1 1 357 3.4E-137 T 26-04-2016 PAM18_RS27350 42ee25905ab4a7d6ed26d28226e1e96e 357 SUPERFAMILY SSF111369 117 174 1.96E-6 T 26-04-2016 PAM18_RS13065 22e885bd87c36e9d6da8485e406439d0 205 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 34 96 1.3E-6 T 26-04-2016 IPR018756 Domain of unknown function DUF2314 PAM18_RS13065 22e885bd87c36e9d6da8485e406439d0 205 PANTHER PTHR38743 1 204 1.5E-116 T 26-04-2016 PAM18_RS13065 22e885bd87c36e9d6da8485e406439d0 205 Pfam PF09951 Protein of unknown function (DUF2185) 115 198 3.2E-31 T 26-04-2016 IPR018689 Domain of unknown function DUF2185 PAM18_RS13065 22e885bd87c36e9d6da8485e406439d0 205 PANTHER PTHR38743:SF2 1 204 1.5E-116 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 Gene3D G3DSA:3.40.190.10 197 272 1.8E-10 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PANTHER PTHR30222 4 349 9.0E-104 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 Gene3D G3DSA:3.40.190.10 273 316 1.2E-48 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 Gene3D G3DSA:3.40.190.10 19 126 1.2E-48 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 Pfam PF13416 Bacterial extracellular solute-binding protein 36 310 6.1E-28 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 SUPERFAMILY SSF53850 20 348 3.23E-78 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PANTHER PTHR30222:SF5 4 349 9.0E-104 T 26-04-2016 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 147 161 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 170 189 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 296 322 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 207 226 1.1E-38 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS01475 70f1ad2c0da8d91864761584534ed532 353 PIRSF PIRSF019574 4 352 1.3E-97 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 PANTHER PTHR24423 76 132 4.3E-66 T 26-04-2016 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 PANTHER PTHR24423 185 460 4.3E-66 T 26-04-2016 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Gene3D G3DSA:3.30.565.10 319 459 9.4E-31 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 SUPERFAMILY SSF55874 298 458 2.1E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 459 4.7E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 SMART SM00387 357 460 1.6E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Pfam PF08521 Two-component sensor kinase N-terminal 19 167 8.8E-42 T 26-04-2016 IPR013727 Two-component sensor kinase, N-terminal PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 2.3E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 SUPERFAMILY SSF47384 227 309 3.34E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 SMART SM00388 244 309 2.3E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 3.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 3.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 3.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Gene3D G3DSA:1.10.287.130 236 305 1.4E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS21860 d66d8e21b37bed45346f5669a89fd1a0 460 Pfam PF00672 HAMP domain 177 239 1.4E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 Gene3D G3DSA:3.30.1300.10 181 282 8.8E-30 T 26-04-2016 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 PANTHER PTHR21299:SF1 1 283 8.2E-136 T 26-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.0E-103 T 26-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 5.1E-7 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 Gene3D G3DSA:3.40.50.620 1 174 4.6E-77 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.3E-102 T 26-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 41.551 T 26-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 PANTHER PTHR21299 1 283 8.2E-136 T 26-04-2016 PAM18_RS24770 467cb8657a70c188993693702fe0d5fe 283 SUPERFAMILY SSF52374 1 281 3.94E-107 T 26-04-2016 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 259 35.403 T 26-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 SMART SM00900 146 247 4.5E-31 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 255 5.5E-93 T 26-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 PANTHER PTHR37838 1 260 1.1E-104 T 26-04-2016 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 Pfam PF04205 FMN-binding domain 146 244 4.6E-13 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 PIRSF PIRSF009437 1 261 5.9E-105 T 26-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 PAM18_RS10085 9186e890bc66112c3a1b94b1c1405b35 261 PANTHER PTHR37838:SF1 1 260 1.1E-104 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 SUPERFAMILY SSF53850 25 248 3.49E-37 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 PANTHER PTHR38834 1 248 3.5E-126 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 Gene3D G3DSA:3.40.190.10 110 206 1.7E-7 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 Gene3D G3DSA:3.40.190.10 210 248 1.1E-10 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 Gene3D G3DSA:3.40.190.10 26 109 1.1E-10 T 26-04-2016 PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 248 1.9E-20 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26860 6bf374275123eaebdae6ac616fd95792 248 PANTHER PTHR38834:SF1 1 248 3.5E-126 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 SUPERFAMILY SSF46785 2 86 7.48E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:3.40.190.10 268 293 2.6E-23 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:3.40.190.10 88 168 2.6E-23 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:3.40.190.10 169 264 2.5E-28 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 PANTHER PTHR30118 4 292 1.2E-125 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 PANTHER PTHR30118:SF8 4 292 1.2E-125 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 5.2E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Pfam PF03466 LysR substrate binding domain 93 292 9.0E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 SUPERFAMILY SSF53850 88 291 7.45E-39 T 26-04-2016 PAM18_RS25655 4b393f058881d56cd6e9fde115c9819f 298 Gene3D G3DSA:1.10.10.10 2 85 1.9E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 281 344 1.5E-14 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 280 348 2.7E-27 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.844 T 26-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 432 492 1.38E-15 T 26-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:2.40.50.140 131 200 4.5E-24 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 PANTHER PTHR22648:SF0 1 450 3.4E-178 T 26-04-2016 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 357 418 2.2E-17 T 26-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF50249 134 201 3.82E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF00575 S1 RNA binding domain 135 197 7.4E-8 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 358 422 1.0E-22 T 26-04-2016 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 431 492 4.0E-22 T 26-04-2016 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 202 280 1.63E-27 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 201 279 5.8E-32 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SMART SM00316 135 202 4.7E-12 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF13184 NusA-like KH domain 232 299 5.5E-26 T 26-04-2016 IPR025249 KH domain, NusA-like GO:0003723 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 5.4E-123 T 26-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 PANTHER PTHR22648 1 450 3.4E-178 T 26-04-2016 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF69705 1 128 7.72E-39 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.4E-21 T 26-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 1.1E-21 T 26-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.1480.10 1 126 5.4E-44 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF08529 NusA N-terminal domain 4 125 2.9E-38 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PAM18_RS24845 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 1.2E-9 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 Gene3D G3DSA:3.40.630.10 183 352 1.2E-44 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 Gene3D G3DSA:3.40.630.10 7 81 1.2E-44 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 PANTHER PTHR32481:SF0 1 357 5.5E-112 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 Gene3D G3DSA:2.40.30.40 82 171 5.6E-13 T 26-04-2016 IPR023367 Peptidase M42, domain 2 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 PANTHER PTHR32481 1 357 5.5E-112 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 Pfam PF05343 M42 glutamyl aminopeptidase 62 343 7.7E-39 T 26-04-2016 IPR008007 Peptidase M42 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 PIRSF PIRSF001123 2 357 3.7E-36 T 26-04-2016 IPR008007 Peptidase M42 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 SUPERFAMILY SSF101821 78 191 2.29E-11 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 SUPERFAMILY SSF53187 183 352 4.0E-39 T 26-04-2016 PAM18_RS14720 f15756f63eeebc95f7f59d4152c2c35b 358 SUPERFAMILY SSF53187 7 87 4.0E-39 T 26-04-2016 PAM18_RS20125 366dd8c4bf3c51c2b94fb42127b4dad7 478 PANTHER PTHR30288 3 474 3.9E-90 T 26-04-2016 PAM18_RS20125 366dd8c4bf3c51c2b94fb42127b4dad7 478 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 107 1.3E-20 T 26-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 PAM18_RS20125 366dd8c4bf3c51c2b94fb42127b4dad7 478 Pfam PF07196 Flagellin hook IN motif 127 186 7.6E-13 T 26-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 PAM18_RS20125 366dd8c4bf3c51c2b94fb42127b4dad7 478 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 234 459 5.7E-62 T 26-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 PAM18_RS20125 366dd8c4bf3c51c2b94fb42127b4dad7 478 PANTHER PTHR30288:SF0 3 474 3.9E-90 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PANTHER PTHR32063 1 1041 0.0 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1430 570 670 7.1E-29 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82714 185 274 2.49E-20 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82714 721 806 5.36E-20 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1430 38 139 8.4E-30 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.2090.10 184 277 1.1E-24 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PANTHER PTHR32063:SF10 1 1041 0.0 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82866 298 499 1.05E-49 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 148 184 4.24E-21 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 276 332 4.24E-21 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82866 804 1026 4.71E-47 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:1.10.3850.10 281 500 1.3E-61 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:1.10.3850.10 814 1025 6.5E-58 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 9.0E-100 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 38 129 2.09E-23 T 26-04-2016 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 26-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.2090.10 721 806 1.3E-22 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS23980 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 567 670 4.03E-24 T 26-04-2016 PAM18_RS20475 b1c96d35d0700a1b277736b2bde5935c 136 SMART SM00769 10 129 8.1E-37 T 26-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 PAM18_RS20475 b1c96d35d0700a1b277736b2bde5935c 136 SUPERFAMILY SSF117070 3 128 1.83E-30 T 26-04-2016 PAM18_RS20475 b1c96d35d0700a1b277736b2bde5935c 136 Gene3D G3DSA:2.60.40.10 9 122 1.2E-17 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS20475 b1c96d35d0700a1b277736b2bde5935c 136 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 4 128 7.0E-4 T 26-04-2016 PAM18_RS20475 b1c96d35d0700a1b277736b2bde5935c 136 Pfam PF03168 Late embryogenesis abundant protein 31 125 8.1E-22 T 26-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 Gene3D G3DSA:1.10.10.10 18 101 8.6E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 PANTHER PTHR30346:SF0 17 274 9.8E-77 T 26-04-2016 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 PANTHER PTHR30346 17 274 9.8E-77 T 26-04-2016 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 Pfam PF03466 LysR substrate binding domain 102 313 6.6E-23 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 SUPERFAMILY SSF46785 10 113 9.53E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 SUPERFAMILY SSF53850 102 299 3.08E-16 T 26-04-2016 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 8.4E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 8.4E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 8.4E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 Gene3D G3DSA:3.40.190.10 105 202 2.6E-5 T 26-04-2016 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 1.5E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15220 1c64a4c843bc8073c670f82f67c5c9c7 316 Gene3D G3DSA:3.40.190.10 203 275 2.9E-8 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 PIRSF PIRSF002741 1 606 3.7E-98 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 517 2.5E-68 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 Gene3D G3DSA:3.90.76.10 64 228 2.5E-33 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 SUPERFAMILY SSF53850 48 603 3.26E-115 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 PANTHER PTHR30290:SF2 1 390 4.8E-224 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 PANTHER PTHR30290:SF2 412 606 4.8E-224 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 PANTHER PTHR30290 1 390 4.8E-224 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 PANTHER PTHR30290 412 606 4.8E-224 T 26-04-2016 PAM18_RS16560 165d41e9c6f90c3ea20d2a5534db607e 609 Gene3D G3DSA:3.10.105.10 321 573 5.4E-45 T 26-04-2016 PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 Gene3D G3DSA:3.10.580.10 1 120 3.3E-29 T 26-04-2016 PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 PANTHER PTHR11911 1 118 1.4E-25 T 26-04-2016 PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 Pfam PF00571 CBS domain 3 53 1.1E-10 T 26-04-2016 IPR000644 CBS domain PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 Pfam PF00571 CBS domain 68 118 5.5E-8 T 26-04-2016 IPR000644 CBS domain PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 SMART SM00116 74 122 0.025 T 26-04-2016 IPR000644 CBS domain PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 SMART SM00116 10 57 0.0019 T 26-04-2016 IPR000644 CBS domain PAM18_RS14785 859cc833ff43f06be81dd62d84c4aa1f 138 SUPERFAMILY SSF54631 1 117 8.09E-30 T 26-04-2016 PAM18_RS04590 71616612c41b1236bb81599ed795b5e3 244 Pfam PF12698 ABC-2 family transporter protein 58 214 3.2E-10 T 26-04-2016 PAM18_RS04590 71616612c41b1236bb81599ed795b5e3 244 PANTHER PTHR30294:SF5 1 240 6.9E-118 T 26-04-2016 PAM18_RS04590 71616612c41b1236bb81599ed795b5e3 244 PANTHER PTHR30294 1 240 6.9E-118 T 26-04-2016 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 115 136 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 137 158 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 159 176 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 4.1E-25 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PANTHER PTHR39322:SF2 2 201 1.4E-175 T 26-04-2016 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 Pfam PF00765 Autoinducer synthase 13 179 1.7E-20 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 51 - T 26-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 SUPERFAMILY SSF55729 1 193 2.75E-31 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 PANTHER PTHR39322 2 201 1.4E-175 T 26-04-2016 PAM18_RS07660 07ab6d9a348c41d361fb0ab6e3038aaf 201 Gene3D G3DSA:3.40.630.30 1 198 2.4E-57 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 PANTHER PTHR30437:SF5 6 132 1.5E-66 T 26-04-2016 PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 6.9E-20 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 SUPERFAMILY SSF54534 48 125 3.66E-16 T 26-04-2016 PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 PANTHER PTHR30437 6 132 1.5E-66 T 26-04-2016 PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF14760 Rnk N-terminus 4 43 5.0E-15 T 26-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:1.10.286.20 1 43 4.8E-19 T 26-04-2016 PAM18_RS27565 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:3.10.50.30 46 134 3.1E-28 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PIRSF PIRSF000350 2 457 1.0E-78 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PANTHER PTHR22912:SF146 1 457 1.4E-230 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 2.5E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 Gene3D G3DSA:3.50.50.60 8 144 8.6E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 454 8.0E-30 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.1E-63 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 SUPERFAMILY SSF51905 6 336 1.37E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 8.1E-37 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.1E-37 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 8.1E-37 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 8.1E-37 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 8.1E-37 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 Gene3D G3DSA:3.30.390.30 333 463 9.2E-38 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 464 1.1E-143 T 26-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 SUPERFAMILY SSF55424 344 463 7.73E-33 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 Gene3D G3DSA:3.50.50.60 145 332 9.0E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 PANTHER PTHR22912 1 457 1.4E-230 T 26-04-2016 PAM18_RS14335 168c0ded7e919a5fb03d55d5a068084a 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PAM18_RS16830 96411b0a9d950ee66c1270e2c2b61ddd 395 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 266 393 4.5E-27 T 26-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 PAM18_RS16830 96411b0a9d950ee66c1270e2c2b61ddd 395 Pfam PF13511 Domain of unknown function (DUF4124) 144 180 1.7E-5 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 SUPERFAMILY SSF54523 10 140 1.49E-17 T 26-04-2016 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 Pfam PF12019 Type II transport protein GspH 45 153 8.7E-13 T 26-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 PANTHER PTHR30093 1 69 3.7E-28 T 26-04-2016 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 PANTHER PTHR30093:SF5 1 69 3.7E-28 T 26-04-2016 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 Gene3D G3DSA:3.30.700.10 10 54 4.4E-8 T 26-04-2016 PAM18_RS23730 a0b0537939d3acab77007eaa7de134c5 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09915 78cd30d6bfad44c993df279ff032d902 73 PANTHER PTHR37011 2 73 1.6E-38 T 26-04-2016 PAM18_RS09915 78cd30d6bfad44c993df279ff032d902 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 2.2E-21 T 26-04-2016 IPR010305 Protein of unknown function DUF903 PAM18_RS09915 78cd30d6bfad44c993df279ff032d902 73 PANTHER PTHR37011:SF1 2 73 1.6E-38 T 26-04-2016 PAM18_RS09915 78cd30d6bfad44c993df279ff032d902 73 Gene3D G3DSA:2.30.30.100 21 73 1.1E-22 T 26-04-2016 PAM18_RS09915 78cd30d6bfad44c993df279ff032d902 73 SUPERFAMILY SSF50182 22 72 2.29E-16 T 26-04-2016 IPR010920 LSM domain PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 SUPERFAMILY SSF103473 8 420 1.83E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 Gene3D G3DSA:1.20.1250.20 234 423 1.0E-20 T 26-04-2016 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 Gene3D G3DSA:1.20.1250.20 11 214 2.2E-24 T 26-04-2016 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 Pfam PF07690 Major Facilitator Superfamily 16 370 7.3E-27 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 PANTHER PTHR23508:SF14 1 425 0.0 T 26-04-2016 PAM18_RS28610 53a1f71169181c210ce9139daa41b5d9 429 PANTHER PTHR23508 1 425 0.0 T 26-04-2016 PAM18_RS18600 15b1c7794bc37b09d030c943b63aeac8 304 PIRSF PIRSF016502 3 303 3.4E-70 T 26-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 PAM18_RS18600 15b1c7794bc37b09d030c943b63aeac8 304 Pfam PF03253 Urea transporter 11 282 3.7E-50 T 26-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 PAM18_RS18600 15b1c7794bc37b09d030c943b63aeac8 304 Gene3D G3DSA:1.10.3430.10 4 287 1.2E-58 T 26-04-2016 IPR029020 Ammonium/urea transporter PAM18_RS18600 15b1c7794bc37b09d030c943b63aeac8 304 PANTHER PTHR10464 1 303 4.8E-162 T 26-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 PAM18_RS18600 15b1c7794bc37b09d030c943b63aeac8 304 PANTHER PTHR10464:SF7 1 303 4.8E-162 T 26-04-2016 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 Gene3D G3DSA:1.10.10.10 5 89 8.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 Pfam PF03466 LysR substrate binding domain 90 294 2.5E-40 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 PANTHER PTHR30537:SF1 1 294 2.0E-189 T 26-04-2016 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 SUPERFAMILY SSF46785 5 90 7.18E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 PANTHER PTHR30537 1 294 2.0E-189 T 26-04-2016 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 SUPERFAMILY SSF53850 91 296 4.16E-42 T 26-04-2016 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 Gene3D G3DSA:3.40.190.10 164 265 3.1E-24 T 26-04-2016 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14460 83213327b99f7c415c0f8292bdda234f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.1E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25115 6d908fbcf831ab548b967da35a9600ed 155 PANTHER PTHR11715:SF12 1 142 4.9E-50 T 26-04-2016 PAM18_RS25115 6d908fbcf831ab548b967da35a9600ed 155 Pfam PF01597 Glycine cleavage H-protein 16 133 1.1E-23 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS25115 6d908fbcf831ab548b967da35a9600ed 155 PANTHER PTHR11715 1 142 4.9E-50 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS25115 6d908fbcf831ab548b967da35a9600ed 155 SUPERFAMILY SSF51230 10 120 1.1E-22 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS25115 6d908fbcf831ab548b967da35a9600ed 155 Gene3D G3DSA:2.40.50.100 21 136 1.9E-22 T 26-04-2016 PAM18_RS22210 51aa7f2ae6790de3725a21ec50681c88 370 PANTHER PTHR30570 1 370 1.8E-113 T 26-04-2016 PAM18_RS22210 51aa7f2ae6790de3725a21ec50681c88 370 Gene3D G3DSA:3.40.190.10 114 302 1.5E-20 T 26-04-2016 PAM18_RS22210 51aa7f2ae6790de3725a21ec50681c88 370 SUPERFAMILY SSF53850 23 369 2.52E-62 T 26-04-2016 PAM18_RS22210 51aa7f2ae6790de3725a21ec50681c88 370 PANTHER PTHR30570:SF0 1 370 1.8E-113 T 26-04-2016 PAM18_RS22210 51aa7f2ae6790de3725a21ec50681c88 370 Pfam PF12849 PBP superfamily domain 16 316 7.5E-23 T 26-04-2016 IPR024370 PBP domain PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 SUPERFAMILY SSF53098 22 201 3.68E-36 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 PANTHER PTHR30231:SF7 1 207 9.8E-116 T 26-04-2016 PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 PANTHER PTHR30231 1 207 9.8E-116 T 26-04-2016 PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 Gene3D G3DSA:3.30.420.10 26 201 2.0E-38 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 Pfam PF00929 Exonuclease 34 194 6.3E-19 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS08920 60a78f7b45b4e4377345297081f952b6 208 SMART SM00479 31 204 8.8E-26 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS10225 c4385b107294392e57d6b133159bf121 60 PANTHER PTHR35534 1 60 1.2E-29 T 26-04-2016 PAM18_RS10225 c4385b107294392e57d6b133159bf121 60 SUPERFAMILY SSF57829 2 55 9.16E-18 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 PAM18_RS10225 c4385b107294392e57d6b133159bf121 60 Pfam PF01783 Ribosomal L32p protein family 2 56 3.4E-20 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PAM18_RS10225 c4385b107294392e57d6b133159bf121 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.732 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PAM18_RS10225 c4385b107294392e57d6b133159bf121 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.8E-19 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 Pfam PF00672 HAMP domain 279 349 2.2E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 SMART SM00283 367 628 2.1E-99 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 SUPERFAMILY SSF103190 91 184 2.43E-14 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 Pfam PF02743 Cache domain 36 260 2.4E-32 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 2.2E-9 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 2.2E-9 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 PANTHER PTHR32089 11 629 0.0 T 26-04-2016 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 Gene3D G3DSA:1.10.287.950 381 598 1.0E-56 T 26-04-2016 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 SUPERFAMILY SSF58104 320 629 8.11E-76 T 26-04-2016 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 PANTHER PTHR32089:SF39 11 629 0.0 T 26-04-2016 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 SMART SM00304 298 352 5.8E-15 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 SMART SM00304 387 447 18.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 Gene3D G3DSA:3.30.450.20 141 275 1.9E-32 T 26-04-2016 PAM18_RS22480 75cf5902727022e73fbf7c7668fa1a02 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 413 627 7.6E-48 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 SUPERFAMILY SSF53807 41 313 9.81E-68 T 26-04-2016 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 195 313 7.6E-28 T 26-04-2016 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PANTHER PTHR30477:SF15 6 314 1.6E-189 T 26-04-2016 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 Pfam PF01297 Zinc-uptake complex component A periplasmic 48 310 1.3E-53 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 36 194 8.3E-41 T 26-04-2016 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PANTHER PTHR30477 6 314 1.6E-189 T 26-04-2016 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 144 163 4.7E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 67 85 4.7E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 42 63 4.7E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 86 105 4.7E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 202 219 4.7E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 202 223 7.5E-9 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 255 273 7.5E-9 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 73 86 7.5E-9 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 PAM18_RS13555 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 86 103 7.5E-9 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 PANTHER PTHR14226 130 452 6.5E-107 T 26-04-2016 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 PANTHER PTHR14226 21 113 6.5E-107 T 26-04-2016 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 Pfam PF01734 Patatin-like phospholipase 27 219 7.6E-28 T 26-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 Pfam PF07244 Surface antigen variable number repeat 333 399 1.4E-5 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 Gene3D G3DSA:2.40.160.50 587 728 2.4E-4 T 26-04-2016 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 PANTHER PTHR14226:SF37 130 452 6.5E-107 T 26-04-2016 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 PANTHER PTHR14226:SF37 21 113 6.5E-107 T 26-04-2016 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 SUPERFAMILY SSF52151 17 302 2.62E-61 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 Pfam PF01103 Surface antigen 450 728 1.8E-9 T 26-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PAM18_RS08355 846c87aa2875bc7f97b7f60d1380f618 728 Gene3D G3DSA:3.40.1090.10 27 221 4.9E-14 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 PANTHER PTHR10617:SF113 7 401 1.2E-56 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 36 3.0E-5 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 Pfam PF04820 Tryptophan halogenase 114 382 2.9E-17 T 26-04-2016 IPR006905 Tryptophan halogenase PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 PANTHER PTHR10617 7 401 1.2E-56 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 323 4.6E-8 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.6E-8 T 26-04-2016 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 Gene3D G3DSA:3.50.50.60 5 79 1.1E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 Gene3D G3DSA:3.50.50.60 300 343 1.1E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 Gene3D G3DSA:3.50.50.60 116 201 1.1E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 SUPERFAMILY SSF51905 305 401 8.67E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12255 e0e96b634ec47bee27f164c3a7b8adf5 449 SUPERFAMILY SSF51905 5 199 8.67E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08000 dfbfc5b606b453ed39db706bc6ad7d51 328 PANTHER PTHR30273 4 317 1.6E-85 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS08000 dfbfc5b606b453ed39db706bc6ad7d51 328 Pfam PF04773 FecR protein 115 210 3.9E-16 T 26-04-2016 IPR006860 FecR protein PAM18_RS08000 dfbfc5b606b453ed39db706bc6ad7d51 328 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 9.2E-10 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS08000 dfbfc5b606b453ed39db706bc6ad7d51 328 PANTHER PTHR30273:SF2 4 317 1.6E-85 T 26-04-2016 PAM18_RS08000 dfbfc5b606b453ed39db706bc6ad7d51 328 PIRSF PIRSF018266 2 325 7.6E-80 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS04495 cedc4bf9ddb63ab6cd09b6db998591f9 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.2E-72 T 26-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PAM18_RS04495 cedc4bf9ddb63ab6cd09b6db998591f9 154 Pfam PF03477 ATP cone domain 52 136 1.1E-13 T 26-04-2016 IPR005144 ATP-cone domain PAM18_RS04495 cedc4bf9ddb63ab6cd09b6db998591f9 154 PANTHER PTHR30455 2 154 1.5E-73 T 26-04-2016 PAM18_RS04495 cedc4bf9ddb63ab6cd09b6db998591f9 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 90.616 T 26-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PAM18_RS04495 cedc4bf9ddb63ab6cd09b6db998591f9 154 PANTHER PTHR30455:SF2 2 154 1.5E-73 T 26-04-2016 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 SMART SM00138 3 259 6.0E-36 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 Gene3D G3DSA:1.10.155.10 4 62 4.1E-5 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 Gene3D G3DSA:1.25.40.10 329 414 2.1E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 SUPERFAMILY SSF48452 330 415 1.82E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 SUPERFAMILY SSF53335 65 253 1.11E-42 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PANTHER PTHR24422 3 419 7.9E-139 T 26-04-2016 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 Gene3D G3DSA:3.40.50.150 65 252 2.0E-51 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.3E-23 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 2.3E-23 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PRINTS PR00996 Glutamate methyltransferase family signature 199 213 2.3E-23 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PRINTS PR00996 Glutamate methyltransferase family signature 218 241 2.3E-23 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PRINTS PR00996 Glutamate methyltransferase family signature 58 70 2.3E-23 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 PANTHER PTHR24422:SF14 3 419 7.9E-139 T 26-04-2016 PAM18_RS06280 1b35c2244313504ff1d53c3ea1c5adcf 422 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 240 1.1E-35 T 26-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 PANTHER PTHR21057:SF6 1 281 1.0E-216 T 26-04-2016 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 Pfam PF00793 DAHP synthetase I family 9 273 2.2E-80 T 26-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 48.256 T 26-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 Gene3D G3DSA:3.20.20.70 18 278 9.3E-107 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 SUPERFAMILY SSF51569 3 277 1.01E-101 T 26-04-2016 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 1.4E-114 T 26-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS06630 6846301b4aecd2a86a8fbb98a1f823c5 281 PANTHER PTHR21057 1 281 1.0E-216 T 26-04-2016 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 Pfam PF01467 Cytidylyltransferase-like 7 184 6.7E-31 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 Gene3D G3DSA:3.40.50.620 3 212 6.1E-67 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 68 1.5E-9 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 211 31.119 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 210 1.1E-50 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 SUPERFAMILY SSF52374 1 211 3.75E-53 T 26-04-2016 PAM18_RS04750 2369378cd22fdc836ea01a6363ff6484 214 PANTHER PTHR12039 1 211 1.7E-59 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 Gene3D G3DSA:3.40.50.150 11 196 2.6E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 Pfam PF03602 Conserved hypothetical protein 95 18 195 4.0E-59 T 26-04-2016 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PIRSF PIRSF004553 17 198 4.5E-48 T 26-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 196 1.1E-50 T 26-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PANTHER PTHR18895:SF60 17 196 3.5E-41 T 26-04-2016 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 SUPERFAMILY SSF53335 18 195 1.67E-49 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 37 53 9.5E-6 T 26-04-2016 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 140 9.5E-6 T 26-04-2016 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 62 76 9.5E-6 T 26-04-2016 PAM18_RS01870 115225bfe9336b6e35b42c7da41127b9 198 PANTHER PTHR18895 17 196 3.5E-41 T 26-04-2016 PAM18_RS02975 c70cccf9e28718aeeee1bd968c474fad 423 PANTHER PTHR30510 1 420 5.7E-180 T 26-04-2016 PAM18_RS02975 c70cccf9e28718aeeee1bd968c474fad 423 Pfam PF04285 Protein of unknown function (DUF444) 4 419 2.9E-180 T 26-04-2016 IPR006698 Uncharacterised protein family UPF0229 PAM18_RS02975 c70cccf9e28718aeeee1bd968c474fad 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.565 T 26-04-2016 IPR006698 Uncharacterised protein family UPF0229 PAM18_RS04250 2585532a4dc0b4ded879188730a924a8 251 Pfam PF09836 Putative DNA-binding domain 8 93 1.7E-22 T 26-04-2016 IPR018640 Putative DNA-binding domain, bacteria PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 PANTHER PTHR34772:SF1 1 82 3.5E-41 T 26-04-2016 PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 4.1E-30 T 26-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 PANTHER PTHR34772 1 82 3.5E-41 T 26-04-2016 PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.384 T 26-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 Gene3D G3DSA:2.30.30.100 1 73 6.8E-37 T 26-04-2016 PAM18_RS25875 5684a283cd8e9ba9a6076879ff3cbce4 82 SUPERFAMILY SSF50182 7 69 2.31E-24 T 26-04-2016 IPR010920 LSM domain PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 Gene3D G3DSA:3.40.50.2300 1 120 4.7E-33 T 26-04-2016 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 PANTHER PTHR26402 1 219 1.4E-111 T 26-04-2016 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 SMART SM00448 1 112 6.3E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 SUPERFAMILY SSF46894 125 216 2.24E-27 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 Gene3D G3DSA:1.10.10.10 125 218 1.9E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 PANTHER PTHR26402:SF518 1 219 1.4E-111 T 26-04-2016 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 1.1E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 SMART SM00862 145 216 9.3E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS25010 375cb714da64bd57d4587ee763db4569 221 SUPERFAMILY SSF52172 1 118 3.7E-35 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS13665 4d756d06b33931c371e95f2fbc889168 107 PIRSF PIRSF029502 1 98 1.5E-50 T 26-04-2016 IPR016921 Uncharacterised conserved protein UCP029502 PAM18_RS13665 4d756d06b33931c371e95f2fbc889168 107 Gene3D G3DSA:1.10.10.10 6 73 3.4E-9 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13665 4d756d06b33931c371e95f2fbc889168 107 SUPERFAMILY SSF46785 6 74 2.66E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 PANTHER PTHR32322 1 296 6.2E-142 T 26-04-2016 PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 SUPERFAMILY SSF103481 187 290 2.22E-12 T 26-04-2016 PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 SUPERFAMILY SSF103481 44 145 1.96E-11 T 26-04-2016 PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 PANTHER PTHR32322:SF8 1 296 6.2E-142 T 26-04-2016 PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 Pfam PF00892 EamA-like transporter family 15 141 2.2E-16 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS25050 d90141f1dc2bcda5dd5b9f70d88a9522 296 Pfam PF00892 EamA-like transporter family 152 284 4.4E-18 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.3E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.3E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 6.3E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.3E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SUPERFAMILY SSF46785 9 142 2.55E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Gene3D G3DSA:1.10.10.10 4 143 1.1E-38 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Pfam PF12802 MarR family 31 91 1.3E-11 T 26-04-2016 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 26-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PANTHER PTHR33164 4 142 2.6E-37 T 26-04-2016 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PANTHER PTHR33164:SF16 4 142 2.6E-37 T 26-04-2016 PAM18_RS08345 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SMART SM00347 26 127 5.5E-23 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF51735 123 283 7.77E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PANTHER PTHR10025 1 284 3.6E-174 T 26-04-2016 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 7.5E-84 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 6.3E-40 T 26-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF53223 1 122 4.7E-41 T 26-04-2016 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.50.720 141 264 3.6E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.192.10 7 140 1.3E-51 T 26-04-2016 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 26-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.159 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS16670 ae52524c6292f844aebd870057fb6361 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.5E-67 T 26-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423:SF360 241 432 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423:SF360 19 26 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423:SF360 151 195 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 7.6E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Pfam PF00571 CBS domain 76 134 2.2E-6 T 26-04-2016 IPR000644 CBS domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Pfam PF00571 CBS domain 11 57 1.0E-5 T 26-04-2016 IPR000644 CBS domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 SUPERFAMILY SSF55874 268 424 7.33E-46 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 SUPERFAMILY SSF54631 11 136 2.85E-13 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 275 5.2E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Gene3D G3DSA:3.30.565.10 279 426 8.6E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 SMART SM00387 317 425 4.5E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Gene3D G3DSA:1.10.287.130 162 218 7.2E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.5E-22 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.5E-22 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.5E-22 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.5E-22 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 SUPERFAMILY SSF47384 161 196 2.35E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423 241 432 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423 19 26 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 PANTHER PTHR24423 151 195 7.0E-91 T 26-04-2016 PAM18_RS10675 2337fadda22c8ea05369e89b78200c78 433 Gene3D G3DSA:3.10.580.10 15 141 1.4E-16 T 26-04-2016 PAM18_RS07700 8541d9a361557daa6553a515db549709 442 PANTHER PTHR30414 1 419 1.0E-221 T 26-04-2016 PAM18_RS07700 8541d9a361557daa6553a515db549709 442 Pfam PF00924 Mechanosensitive ion channel 146 399 3.4E-44 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS07700 8541d9a361557daa6553a515db549709 442 SUPERFAMILY SSF50182 188 255 1.18E-11 T 26-04-2016 IPR010920 LSM domain PAM18_RS07700 8541d9a361557daa6553a515db549709 442 Gene3D G3DSA:2.30.30.60 205 255 1.6E-9 T 26-04-2016 PAM18_RS07700 8541d9a361557daa6553a515db549709 442 PANTHER PTHR30414:SF0 1 419 1.0E-221 T 26-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 SUPERFAMILY SSF53335 58 334 1.11E-68 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 134 147 - T 26-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 PANTHER PTHR11558:SF26 27 364 2.6E-153 T 26-04-2016 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 PANTHER PTHR11558 27 364 2.6E-153 T 26-04-2016 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 Gene3D G3DSA:2.30.140.10 62 107 8.0E-13 T 26-04-2016 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 58 342 33.21 T 26-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 Gene3D G3DSA:3.40.50.150 110 354 5.1E-70 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25000 6baecf65bee7c45f15e9a33c05b35e1a 375 Pfam PF01564 Spermine/spermidine synthase 65 287 5.4E-52 T 26-04-2016 PAM18_RS12590 6a87e447ec3ae4acafa6f20e4470226f 231 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 11 83 3.2E-7 T 26-04-2016 IPR032753 HicB-like antitoxin PAM18_RS12590 6a87e447ec3ae4acafa6f20e4470226f 231 SUPERFAMILY SSF143100 4 64 3.92E-8 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 PANTHER PTHR30126 3 292 8.1E-138 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 SUPERFAMILY SSF53850 92 294 4.16E-34 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 PANTHER PTHR30126:SF15 3 292 8.1E-138 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 SUPERFAMILY SSF46785 3 108 2.44E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 Gene3D G3DSA:3.40.190.10 94 178 4.9E-20 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 Gene3D G3DSA:3.40.190.10 179 261 1.6E-16 T 26-04-2016 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.8E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 Gene3D G3DSA:1.10.10.10 4 86 1.5E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04045 cc88f8b9731e7a1f458403e189bff422 296 Pfam PF03466 LysR substrate binding domain 92 292 4.1E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS22675 a6b765636c86916a62b72812f1190727 371 PANTHER PTHR22935:SF10 1 370 5.2E-94 T 26-04-2016 PAM18_RS22675 a6b765636c86916a62b72812f1190727 371 PANTHER PTHR22935 1 370 5.2E-94 T 26-04-2016 PAM18_RS22675 a6b765636c86916a62b72812f1190727 371 Pfam PF00144 Beta-lactamase 58 350 4.8E-45 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS22675 a6b765636c86916a62b72812f1190727 371 Gene3D G3DSA:3.40.710.10 58 364 1.3E-45 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS22675 a6b765636c86916a62b72812f1190727 371 SUPERFAMILY SSF56601 11 360 7.85E-78 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 PANTHER PTHR33362:SF1 15 388 2.1E-286 T 26-04-2016 PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 PANTHER PTHR33362:SF1 423 669 2.1E-286 T 26-04-2016 PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 112 592 7.1E-88 T 26-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 16 668 2.9E-227 T 26-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 PANTHER PTHR33362 15 388 2.1E-286 T 26-04-2016 PAM18_RS28955 f0858b6859f3bc7e9b2aae2a01039728 674 PANTHER PTHR33362 423 669 2.1E-286 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 Gene3D G3DSA:2.40.50.100 162 195 8.6E-15 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 Gene3D G3DSA:2.40.50.100 67 101 8.6E-15 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 PANTHER PTHR30469 5 363 1.5E-234 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 PANTHER PTHR30469:SF5 5 363 1.5E-234 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 SUPERFAMILY SSF111369 58 272 1.44E-36 T 26-04-2016 PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 267 6.4E-25 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS03740 52e361faf94ff8e2e3a5723c2716d56e 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 3.6E-75 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 PANTHER PTHR11647:SF69 1 479 0.0 T 26-04-2016 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 Pfam PF01979 Amidohydrolase family 50 436 1.8E-28 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:2.30.40.10 377 460 3.6E-14 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 455 4.6E-176 T 26-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51556 54 383 8.85E-109 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 PANTHER PTHR11647 1 479 0.0 T 26-04-2016 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51338 1 53 9.02E-34 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51338 383 455 9.02E-34 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:2.30.40.10 3 67 4.4E-31 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02230 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:3.20.20.140 68 376 2.4E-121 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.996 T 26-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.40.50.980 79 266 3.8E-43 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.40.50.980 267 429 3.5E-30 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.8E-22 T 26-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:2.30.38.10 440 515 3.0E-6 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.30.300.30 518 633 9.9E-27 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 PANTHER PTHR24095 20 643 0.0 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 PANTHER PTHR24095:SF178 20 643 0.0 T 26-04-2016 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 26-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Pfam PF00501 AMP-binding enzyme 83 522 1.5E-90 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 3.7E-25 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS21210 f925e89b92c5135c43769afc4810874e 651 SUPERFAMILY SSF56801 17 642 1.28E-183 T 26-04-2016 PAM18_RS22500 0fc168584125beccf141aa270fe8de1d 333 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 309 1.7E-40 T 26-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PAM18_RS22500 0fc168584125beccf141aa270fe8de1d 333 PANTHER PTHR37693 1 333 4.3E-102 T 26-04-2016 PAM18_RS22500 0fc168584125beccf141aa270fe8de1d 333 PANTHER PTHR37693:SF1 1 333 4.3E-102 T 26-04-2016 PAM18_RS22500 0fc168584125beccf141aa270fe8de1d 333 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 38 315 2.6E-20 T 26-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PAM18_RS07055 81eb77b4fc5114735ae3ca575dc4b16a 356 PANTHER PTHR31223:SF1 31 307 5.3E-156 T 26-04-2016 PAM18_RS07055 81eb77b4fc5114735ae3ca575dc4b16a 356 Pfam PF03641 Possible lysine decarboxylase 131 263 6.3E-29 T 26-04-2016 IPR031100 LOG family PAM18_RS07055 81eb77b4fc5114735ae3ca575dc4b16a 356 PANTHER PTHR31223 31 307 5.3E-156 T 26-04-2016 PAM18_RS07055 81eb77b4fc5114735ae3ca575dc4b16a 356 SUPERFAMILY SSF102405 68 263 9.31E-47 T 26-04-2016 PAM18_RS07055 81eb77b4fc5114735ae3ca575dc4b16a 356 Gene3D G3DSA:3.40.50.450 63 351 1.2E-69 T 26-04-2016 PAM18_RS11115 bb5f2d0bb445c4b850b470ede09b6401 160 Gene3D G3DSA:3.30.750.24 5 106 4.8E-15 T 26-04-2016 IPR002645 STAS domain PAM18_RS11115 bb5f2d0bb445c4b850b470ede09b6401 160 PIRSF PIRSF029548 1 160 1.7E-106 T 26-04-2016 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type PAM18_RS11115 bb5f2d0bb445c4b850b470ede09b6401 160 Pfam PF01740 STAS domain 7 103 4.1E-6 T 26-04-2016 IPR002645 STAS domain PAM18_RS11115 bb5f2d0bb445c4b850b470ede09b6401 160 SUPERFAMILY SSF52091 6 106 2.75E-14 T 26-04-2016 IPR002645 STAS domain PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 Gene3D G3DSA:1.10.1660.10 26 101 3.6E-18 T 26-04-2016 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 27 38 2.6E-6 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 51 2.6E-6 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 61 81 2.6E-6 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 Pfam PF13411 MerR HTH family regulatory protein 26 93 1.1E-17 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 SUPERFAMILY SSF46955 26 97 3.19E-15 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 SMART SM00422 26 94 1.5E-11 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 PANTHER PTHR30204:SF13 18 203 5.9E-36 T 26-04-2016 PAM18_RS08440 c59c2da0c5c6761ae7b1b0d3c049fabd 270 PANTHER PTHR30204 18 203 5.9E-36 T 26-04-2016 PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 PANTHER PTHR33602 10 148 1.3E-42 T 26-04-2016 PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 Pfam PF02631 RecX family 33 148 4.3E-32 T 26-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 Gene3D G3DSA:1.10.10.10 103 153 1.3E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 PANTHER PTHR33602:SF1 10 148 1.3E-42 T 26-04-2016 PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 Gene3D G3DSA:1.10.10.10 57 102 3.2E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 Gene3D G3DSA:1.10.10.10 12 56 1.5E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07050 9a23dbbf5c8d09507ce58bb4b4c3277c 153 Hamap MF_01114 Regulatory protein RecX [recX]. 6 153 13.77 T 26-04-2016 IPR003783 Regulatory protein RecX GO:0006282 PAM18_RS24640 267d636fad0ac6477c1cffff46b946a0 295 SUPERFAMILY SSF159501 35 280 7.32E-69 T 26-04-2016 PAM18_RS24640 267d636fad0ac6477c1cffff46b946a0 295 PIRSF PIRSF020419 1 293 1.1E-131 T 26-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted PAM18_RS24640 267d636fad0ac6477c1cffff46b946a0 295 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 53 247 2.7E-44 T 26-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 SUPERFAMILY SSF161098 17 204 2.35E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 211 1.6E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 PANTHER PTHR30614:SF14 1 221 2.3E-102 T 26-04-2016 PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 1.6E-26 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 Gene3D G3DSA:1.10.3720.10 15 217 2.8E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS19295 ea51db2b033c99b3794e61319516422e 221 PANTHER PTHR30614 1 221 2.3E-102 T 26-04-2016 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 361 2.9E-115 T 26-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF50331 244 363 3.63E-18 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:3.40.50.300 6 245 2.1E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 PANTHER PTHR24220:SF402 12 361 2.1E-230 T 26-04-2016 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 PANTHER PTHR24220 12 361 2.1E-230 T 26-04-2016 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF00005 ABC transporter 28 169 7.2E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF08402 TOBE domain 286 363 4.1E-17 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF52540 10 249 2.18E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 SMART SM00382 36 219 3.3E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS03055 5e46a81fd242851d4484fe5d8b48d412 369 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 SUPERFAMILY SSF53850 8 261 2.06E-57 T 26-04-2016 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 260 3.4E-48 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 Gene3D G3DSA:3.40.190.10 33 113 2.6E-30 T 26-04-2016 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 Gene3D G3DSA:3.40.190.10 222 260 2.6E-30 T 26-04-2016 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 PANTHER PTHR18966:SF208 26 260 1.8E-98 T 26-04-2016 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 SMART SM00062 36 262 2.1E-44 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 PANTHER PTHR18966 26 260 1.8E-98 T 26-04-2016 PAM18_RS19285 70919ce890f4d0689961d2326772737a 273 Gene3D G3DSA:3.40.190.10 114 221 3.0E-20 T 26-04-2016 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 PANTHER PTHR30231:SF0 1 237 1.9E-115 T 26-04-2016 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 178 1.4E-64 T 26-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 PANTHER PTHR30231 1 237 1.9E-115 T 26-04-2016 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 238 1.1E-88 T 26-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 Gene3D G3DSA:3.30.420.10 1 177 8.5E-64 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 Pfam PF00929 Exonuclease 4 167 7.0E-39 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 SMART SM00479 2 176 1.2E-49 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS16535 0441252c6acfccaa254d1dc117920e11 246 SUPERFAMILY SSF53098 1 177 2.64E-55 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 PANTHER PTHR11839:SF5 11 204 7.3E-106 T 26-04-2016 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 195 7.6E-53 T 26-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 Pfam PF00293 NUDIX domain 52 174 7.8E-15 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 PANTHER PTHR11839 11 204 7.3E-106 T 26-04-2016 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 Gene3D G3DSA:3.90.79.10 11 197 3.3E-59 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS26010 20a57aafdf6f8b60142e022471246ae8 205 SUPERFAMILY SSF55811 9 204 7.72E-50 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS15500 344baf23c0b01b80aaf65a13905fddef 74 SUPERFAMILY SSF141447 1 74 6.15E-31 T 26-04-2016 PAM18_RS15500 344baf23c0b01b80aaf65a13905fddef 74 Pfam PF11462 Protein of unknown function (DUF3203) 1 74 2.8E-34 T 26-04-2016 IPR021564 Protein of unknown function DUF3203 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 PANTHER PTHR32552:SF0 63 813 4.2E-230 T 26-04-2016 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 Gene3D G3DSA:2.40.170.20 239 812 7.9E-75 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 Gene3D G3DSA:2.170.130.10 116 238 2.3E-23 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 Pfam PF00593 TonB dependent receptor 565 808 1.3E-24 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 PANTHER PTHR32552 63 813 4.2E-230 T 26-04-2016 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 794 1.2E-103 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 SMART SM00965 53 104 4.9E-14 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 238 3.1E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS18120 1d078b43c9e27c3c089eec13121e4bfe 813 SUPERFAMILY SSF56935 122 813 2.07E-95 T 26-04-2016 PAM18_RS25230 dab0ce63867cf71c73a428a390aff005 478 PANTHER PTHR33908:SF4 1 478 0.0 T 26-04-2016 PAM18_RS25230 dab0ce63867cf71c73a428a390aff005 478 PANTHER PTHR33908 1 478 0.0 T 26-04-2016 PAM18_RS25230 dab0ce63867cf71c73a428a390aff005 478 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 13 240 4.4E-18 T 26-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 550 583 - T 26-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PANTHER PTHR30332:SF3 47 650 4.8E-304 T 26-04-2016 PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 Pfam PF03958 Bacterial type II/III secretion system short domain 146 205 3.7E-9 T 26-04-2016 IPR005644 NolW-like PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 Pfam PF03958 Bacterial type II/III secretion system short domain 281 360 4.9E-16 T 26-04-2016 IPR005644 NolW-like PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 Pfam PF03958 Bacterial type II/III secretion system short domain 210 276 2.5E-13 T 26-04-2016 IPR005644 NolW-like PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PANTHER PTHR30332 47 650 4.8E-304 T 26-04-2016 PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 569 587 2.6E-41 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 2.6E-41 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 434 458 2.6E-41 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 469 479 2.6E-41 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 PRINTS PR00811 Bacterial general secretion pathway protein D signature 592 606 2.6E-41 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 Pfam PF00263 Bacterial type II and III secretion system protein 438 605 1.3E-53 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS09540 1a438bb575b68e1cb5ccda6f96243946 658 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 55 613 3.8E-163 T 26-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PANTHER PTHR11606 1 445 4.8E-251 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Gene3D G3DSA:3.40.192.10 66 187 1.1E-61 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Gene3D G3DSA:1.10.285.10 4 65 7.0E-27 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Gene3D G3DSA:1.10.285.10 371 445 1.8E-27 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Gene3D G3DSA:3.40.50.720 207 370 4.7E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 SMART SM00839 202 443 1.4E-91 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 443 5.6E-86 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PANTHER PTHR11606:SF4 1 445 4.8E-251 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 SUPERFAMILY SSF53223 4 194 2.69E-75 T 26-04-2016 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PIRSF PIRSF000185 20 445 5.2E-119 T 26-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 3.0E-50 T 26-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 SUPERFAMILY SSF51735 200 444 8.74E-77 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 6.6E-33 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 6.6E-33 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 6.6E-33 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS23925 51b91a917f86e5c821500eb928b671ae 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 6.6E-33 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS05910 1097218081802e36b23b48f715939486 380 PANTHER PTHR10625:SF104 1 16 2.2E-102 T 26-04-2016 PAM18_RS05910 1097218081802e36b23b48f715939486 380 PANTHER PTHR10625:SF104 32 349 2.2E-102 T 26-04-2016 PAM18_RS05910 1097218081802e36b23b48f715939486 380 PANTHER PTHR10625 1 16 2.2E-102 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS05910 1097218081802e36b23b48f715939486 380 PANTHER PTHR10625 32 349 2.2E-102 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS05910 1097218081802e36b23b48f715939486 380 Pfam PF00850 Histone deacetylase domain 42 328 3.3E-77 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS05910 1097218081802e36b23b48f715939486 380 SUPERFAMILY SSF52768 2 355 4.8E-105 T 26-04-2016 PAM18_RS05910 1097218081802e36b23b48f715939486 380 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 8.9E-15 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS05910 1097218081802e36b23b48f715939486 380 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 8.9E-15 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS05910 1097218081802e36b23b48f715939486 380 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 8.9E-15 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS05910 1097218081802e36b23b48f715939486 380 Gene3D G3DSA:3.40.800.20 4 360 6.6E-98 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.30.450.90 81 210 2.2E-50 T 26-04-2016 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 Pfam PF00437 Type II/IV secretion system protein 114 377 2.8E-82 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 3 466 3.7E-216 T 26-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 PANTHER PTHR30258 4 468 2.6E-215 T 26-04-2016 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 SMART SM00382 238 359 7.2E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 PANTHER PTHR30258:SF9 4 468 2.6E-215 T 26-04-2016 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 305 319 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF160246 3 64 8.11E-7 T 26-04-2016 PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.40.50.300 217 467 1.4E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22225 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF52540 94 466 3.17E-101 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 134 277 1.82E-52 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.1700.10 128 282 2.1E-60 T 26-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 7.5E-122 T 26-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 PANTHER PTHR33694:SF1 1 303 5.7E-139 T 26-04-2016 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.8E-109 T 26-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.230.20 3 125 2.8E-47 T 26-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 50.515 T 26-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 3 124 6.98E-43 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS22980 4c5afba7d803b5dbd2d90ff6fdb78903 303 PANTHER PTHR33694 1 303 5.7E-139 T 26-04-2016 PAM18_RS16575 4835d815d401462563788a968ae9118f 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 45 6.3E-6 T 26-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAM18_RS16575 4835d815d401462563788a968ae9118f 339 SUPERFAMILY SSF161098 136 322 4.32E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16575 4835d815d401462563788a968ae9118f 339 Gene3D G3DSA:1.10.3720.10 133 337 1.4E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16575 4835d815d401462563788a968ae9118f 339 PANTHER PTHR30325 1 339 7.2E-210 T 26-04-2016 PAM18_RS16575 4835d815d401462563788a968ae9118f 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 8.0E-28 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 PANTHER PTHR21666 288 468 3.3E-99 T 26-04-2016 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 Pfam PF01464 Transglycosylase SLT domain 310 418 8.7E-16 T 26-04-2016 IPR008258 Transglycosylase SLT domain 1 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 PANTHER PTHR21666:SF206 288 468 3.3E-99 T 26-04-2016 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 SUPERFAMILY SSF53955 285 457 3.38E-31 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 Gene3D G3DSA:3.40.190.10 5 176 3.1E-7 T 26-04-2016 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 Gene3D G3DSA:1.10.530.10 288 458 6.1E-37 T 26-04-2016 PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 271 4.5E-8 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS10760 91c1967aff350390041921b96295ce0c 476 SUPERFAMILY SSF53850 47 284 3.6E-24 T 26-04-2016 PAM18_RS15410 1d0409ad70f0a1247c424825c7c534fa 236 Pfam PF03591 AzlC protein 20 157 2.8E-36 T 26-04-2016 IPR011606 Branched-chain amino acid transport, permease PAM18_RS15410 1d0409ad70f0a1247c424825c7c534fa 236 PANTHER PTHR34979 1 236 5.0E-59 T 26-04-2016 PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 SUPERFAMILY SSF47616 71 194 6.55E-22 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 Gene3D G3DSA:1.20.1050.10 81 194 1.3E-25 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 Gene3D G3DSA:3.40.30.10 1 80 2.0E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 SUPERFAMILY SSF52833 1 83 2.2E-22 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 PANTHER PTHR11260 1 193 8.5E-52 T 26-04-2016 PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 185 1.4E-7 T 26-04-2016 PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 74 6.1E-12 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS09890 d55113ef8590ba90610e7c062a64b541 198 PANTHER PTHR11260:SF285 1 193 8.5E-52 T 26-04-2016 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 Pfam PF00813 FliP family 56 248 4.0E-79 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PANTHER PTHR30587 11 254 9.0E-125 T 26-04-2016 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 93 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 112 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 2.1E-66 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PANTHER PTHR30587:SF0 11 254 9.0E-125 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 56 252 3.3E-88 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 138 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 124 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 52 61 4.3E-24 T 26-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 PAM18_RS18855 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 PANTHER PTHR23501:SF76 1 455 6.2E-202 T 26-04-2016 PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 Pfam PF07690 Major Facilitator Superfamily 5 399 1.6E-53 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 PANTHER PTHR23501 1 455 6.2E-202 T 26-04-2016 PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 Gene3D G3DSA:1.20.1250.20 253 453 5.1E-23 T 26-04-2016 PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 SUPERFAMILY SSF103473 237 452 1.19E-63 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 SUPERFAMILY SSF103473 2 183 1.19E-63 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15330 93555db37fde806e9e638f2e8bf3cd71 461 Gene3D G3DSA:1.20.1250.20 2 184 1.5E-28 T 26-04-2016 PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 Pfam PF00534 Glycosyl transferases group 1 199 302 1.0E-10 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 Pfam PF13439 Glycosyltransferase Family 4 17 183 1.1E-9 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 SUPERFAMILY SSF53756 13 366 8.9E-44 T 26-04-2016 PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 PANTHER PTHR12526:SF374 1 366 6.1E-49 T 26-04-2016 PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 Gene3D G3DSA:3.40.50.2000 201 310 1.8E-10 T 26-04-2016 PAM18_RS14390 ff0985c6b8b2da6760cca8b04c919318 367 PANTHER PTHR12526 1 366 6.1E-49 T 26-04-2016 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 85 105 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 17 45 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 208 234 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 150 173 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 179 201 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 59 82 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 121 147 9.5E-30 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 Pfam PF00520 Ion transport protein 26 236 3.8E-29 T 26-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 SUPERFAMILY SSF81324 24 234 1.71E-51 T 26-04-2016 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 Gene3D G3DSA:1.10.287.70 26 234 2.1E-52 T 26-04-2016 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PANTHER PTHR11537 5 241 8.4E-104 T 26-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 PAM18_RS18605 adb6c61c484b4b96164dff917f5b1edd 283 PANTHER PTHR11537:SF137 5 241 8.4E-104 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 124 144 1.2E-7 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 190 200 1.2E-7 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 8 21 1.2E-7 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 36 48 1.2E-7 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 9 175 7.45E-28 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PANTHER PTHR19375:SF182 290 414 1.3E-137 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PANTHER PTHR19375:SF182 7 240 1.3E-137 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 105 184 6.0E-29 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 9 72 6.0E-29 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PANTHER PTHR19375 290 414 1.3E-137 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 PANTHER PTHR19375 7 240 1.3E-137 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 10 89 4.0E-5 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 299 395 6.6E-10 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 100 230 1.6E-8 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 296 416 4.57E-35 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 374 388 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 179 247 4.57E-35 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 356 396 3.1E-15 T 26-04-2016 PAM18_RS25510 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 185 225 3.1E-15 T 26-04-2016 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 Pfam PF07969 Amidohydrolase family 97 579 1.2E-120 T 26-04-2016 IPR013108 Amidohydrolase 3 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 PANTHER PTHR22642:SF2 49 597 3.1E-177 T 26-04-2016 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 PANTHER PTHR22642 49 597 3.1E-177 T 26-04-2016 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 Gene3D G3DSA:2.30.40.10 45 117 2.2E-17 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 SUPERFAMILY SSF51338 538 584 3.17E-26 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 SUPERFAMILY SSF51338 42 109 3.17E-26 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 Gene3D G3DSA:3.20.20.140 252 529 3.3E-16 T 26-04-2016 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 Gene3D G3DSA:3.20.20.140 118 130 3.3E-16 T 26-04-2016 PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 SUPERFAMILY SSF51556 108 170 7.56E-43 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS11685 ed6255d9e30d6290991d12e482e8f94a 659 SUPERFAMILY SSF51556 250 538 7.56E-43 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS26110 a9b28ffa75ac2dcc6d12d9fb96153074 110 SUPERFAMILY SSF103481 5 106 6.67E-20 T 26-04-2016 PAM18_RS26110 a9b28ffa75ac2dcc6d12d9fb96153074 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-25 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS26110 a9b28ffa75ac2dcc6d12d9fb96153074 110 PANTHER PTHR30561:SF1 1 110 2.7E-52 T 26-04-2016 PAM18_RS26110 a9b28ffa75ac2dcc6d12d9fb96153074 110 PANTHER PTHR30561 1 110 2.7E-52 T 26-04-2016 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 PANTHER PTHR30474:SF2 1 397 2.7E-170 T 26-04-2016 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 19 388 40.121 T 26-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 378 4.4E-129 T 26-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 26-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 Pfam PF01098 Cell cycle protein 25 380 2.8E-103 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PAM18_RS23015 cc9a4ef7e24080549f7553173ddecc6c 399 PANTHER PTHR30474 1 397 2.7E-170 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PAM18_RS10260 ef87cb800404fbede838058a831ae9f6 349 PANTHER PTHR30518 1 340 1.7E-96 T 26-04-2016 PAM18_RS10260 ef87cb800404fbede838058a831ae9f6 349 Gene3D G3DSA:3.30.160.60 302 335 1.5E-18 T 26-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 PAM18_RS10260 ef87cb800404fbede838058a831ae9f6 349 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 329 8.6E-81 T 26-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PAM18_RS10260 ef87cb800404fbede838058a831ae9f6 349 PANTHER PTHR30518:SF2 1 340 1.7E-96 T 26-04-2016 PAM18_RS10260 ef87cb800404fbede838058a831ae9f6 349 Pfam PF02618 YceG-like family 43 327 3.5E-76 T 26-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 PANTHER PTHR26402 2 223 2.2E-145 T 26-04-2016 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 SUPERFAMILY SSF46894 133 224 4.54E-21 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 SMART SM00862 148 224 4.4E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 Gene3D G3DSA:3.40.50.2300 2 120 6.2E-35 T 26-04-2016 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.2E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 Pfam PF00072 Response regulator receiver domain 4 112 3.7E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 PANTHER PTHR26402:SF573 2 223 2.2E-145 T 26-04-2016 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 SMART SM00448 2 112 5.1E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 SUPERFAMILY SSF52172 1 123 6.83E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS02340 fd71bdcf405927820c403377ffb26ac8 229 Gene3D G3DSA:1.10.10.10 133 226 4.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26645 da5796ff05d22e99f3ff68692dacd8a1 467 PANTHER PTHR11785 3 455 8.8E-295 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS26645 da5796ff05d22e99f3ff68692dacd8a1 467 PIRSF PIRSF006060 1 459 6.1E-70 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS26645 da5796ff05d22e99f3ff68692dacd8a1 467 Pfam PF00324 Amino acid permease 15 446 1.5E-102 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS26645 da5796ff05d22e99f3ff68692dacd8a1 467 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS26645 da5796ff05d22e99f3ff68692dacd8a1 467 PANTHER PTHR11785:SF351 3 455 8.8E-295 T 26-04-2016 PAM18_RS08160 69c7227e9cba20c8d1d215b57362ea16 366 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.2E-161 T 26-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PAM18_RS08160 69c7227e9cba20c8d1d215b57362ea16 366 PIRSF PIRSF007313 1 361 6.8E-157 T 26-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 PAM18_RS26735 508723a4d71bb1974cdaca8fd332ede0 194 SUPERFAMILY SSF53335 2 161 6.27E-24 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26735 508723a4d71bb1974cdaca8fd332ede0 194 PANTHER PTHR10108 1 177 5.7E-54 T 26-04-2016 PAM18_RS26735 508723a4d71bb1974cdaca8fd332ede0 194 Pfam PF13649 Methyltransferase domain 32 124 6.7E-11 T 26-04-2016 PAM18_RS26735 508723a4d71bb1974cdaca8fd332ede0 194 PANTHER PTHR10108:SF838 1 177 5.7E-54 T 26-04-2016 PAM18_RS26735 508723a4d71bb1974cdaca8fd332ede0 194 Gene3D G3DSA:3.40.50.150 2 143 2.9E-21 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS27425 9ffceec0d5e0d8a807aa41ebf790b7f8 160 PANTHER PTHR35146 1 152 2.8E-52 T 26-04-2016 PAM18_RS27425 9ffceec0d5e0d8a807aa41ebf790b7f8 160 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 2.3E-42 T 26-04-2016 IPR003791 Protein of unknown function UPF0178 PAM18_RS27425 9ffceec0d5e0d8a807aa41ebf790b7f8 160 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.687 T 26-04-2016 IPR003791 Protein of unknown function UPF0178 PAM18_RS27425 9ffceec0d5e0d8a807aa41ebf790b7f8 160 PANTHER PTHR35146:SF1 1 152 2.8E-52 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309:SF12 411 510 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309:SF12 377 395 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309:SF12 5 318 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 SUPERFAMILY SSF48179 415 498 1.45E-20 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Gene3D G3DSA:3.40.50.720 9 190 7.6E-52 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309 411 510 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309 377 395 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 PANTHER PTHR23309 5 318 2.5E-265 T 26-04-2016 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 5.7E-57 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 SUPERFAMILY SSF48179 188 295 2.21E-33 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 9.4E-32 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 498 2.7E-21 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Gene3D G3DSA:1.10.1040.10 415 493 2.3E-21 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 Gene3D G3DSA:1.10.1040.10 191 287 9.5E-31 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS07180 fe1d5cb4284b2305f18d125d62d76a3d 510 SUPERFAMILY SSF51735 9 188 3.85E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 SUPERFAMILY SSF102114 48 261 2.09E-12 T 26-04-2016 PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 PANTHER PTHR11228 10 312 9.0E-107 T 26-04-2016 PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 Gene3D G3DSA:3.20.20.70 66 253 1.7E-7 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 Pfam PF04055 Radical SAM superfamily 67 245 2.8E-13 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 PANTHER PTHR11228:SF26 10 312 9.0E-107 T 26-04-2016 PAM18_RS00355 b82799cf868a597956b7893df6e9ec44 352 SMART SM00729 63 288 9.4E-4 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS24650 f684596d8c64d3f9fc6a73adfad7bf47 345 PANTHER PTHR30472 5 344 1.5E-150 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS24650 f684596d8c64d3f9fc6a73adfad7bf47 345 Gene3D G3DSA:1.10.3470.10 6 344 7.6E-107 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS24650 f684596d8c64d3f9fc6a73adfad7bf47 345 PANTHER PTHR30472:SF3 5 344 1.5E-150 T 26-04-2016 PAM18_RS24650 f684596d8c64d3f9fc6a73adfad7bf47 345 SUPERFAMILY SSF81345 5 342 2.22E-82 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS24650 f684596d8c64d3f9fc6a73adfad7bf47 345 Pfam PF01032 FecCD transport family 18 342 1.0E-89 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 Pfam PF12801 4Fe-4S binding domain 597 643 1.1E-5 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 Pfam PF12801 4Fe-4S binding domain 496 542 8.5E-15 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 PANTHER PTHR30224:SF4 17 367 0.0 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 PANTHER PTHR30224:SF4 389 703 0.0 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 PANTHER PTHR30224 17 367 0.0 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 PANTHER PTHR30224 389 703 0.0 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 SUPERFAMILY SSF54862 513 529 2.96E-6 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 SUPERFAMILY SSF54862 611 677 2.96E-6 T 26-04-2016 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 SMART SM00900 82 175 1.5E-13 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 Pfam PF04205 FMN-binding domain 85 172 9.3E-7 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS08095 ca595bf47bc2fd1d7edd874c392bb6b6 715 PIRSF PIRSF036354 1 715 0.0 T 26-04-2016 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 SUPERFAMILY SSF52172 1 122 9.11E-34 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:2.40.50.40 141 204 4.3E-11 T 26-04-2016 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF00072 Response regulator receiver domain 3 113 4.3E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00850 148 246 8.0E-25 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 PANTHER PTHR26402:SF579 1 121 2.9E-46 T 26-04-2016 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 PANTHER PTHR26402 1 121 2.9E-46 T 26-04-2016 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:3.40.50.2300 1 121 4.1E-34 T 26-04-2016 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF04397 LytTr DNA-binding domain 149 245 5.0E-21 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 PAM18_RS27500 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00448 1 113 6.8E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 SUPERFAMILY SSF55424 343 464 9.11E-41 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PANTHER PTHR22912 1 459 6.6E-234 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 Gene3D G3DSA:3.30.390.30 335 463 3.5E-48 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.36E-78 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 2.56E-35 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.56E-35 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 2.56E-35 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.56E-35 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 2.56E-35 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PANTHER PTHR22912:SF151 1 459 6.6E-234 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 464 3.8E-158 T 26-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 PIRSF PIRSF000350 1 462 3.4E-91 T 26-04-2016 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 328 4.2E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 Gene3D G3DSA:3.50.50.60 141 334 1.7E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 SUPERFAMILY SSF51905 1 374 9.83E-64 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.0E-39 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS25290 e6642ea9383035f75e74d9bd4bf2ee63 466 Gene3D G3DSA:3.50.50.60 2 140 2.1E-41 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 Gene3D G3DSA:1.10.10.60 218 266 1.1E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 PANTHER PTHR11019:SF68 1 316 7.7E-114 T 26-04-2016 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 SMART SM00342 229 312 4.4E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 Pfam PF12833 Helix-turn-helix domain 235 313 7.3E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 Gene3D G3DSA:3.40.50.880 5 217 6.8E-44 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 PANTHER PTHR11019 1 316 7.7E-114 T 26-04-2016 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF46689 266 315 6.45E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 Pfam PF01965 DJ-1/PfpI family 5 173 7.0E-10 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF46689 212 263 2.51E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 SUPERFAMILY SSF52317 5 194 7.64E-44 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS05865 2626b3788e8d4dc3a959eae522a35835 317 Gene3D G3DSA:1.10.10.60 267 314 1.1E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 SMART SM00347 32 132 5.5E-24 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 Gene3D G3DSA:1.10.10.10 14 143 6.1E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PANTHER PTHR18964:SF141 14 145 5.4E-60 T 26-04-2016 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 6.4E-17 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 6.4E-17 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 6.4E-17 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 6.4E-17 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 Pfam PF01047 MarR family 39 96 1.5E-12 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 SUPERFAMILY SSF46785 14 145 9.73E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 PANTHER PTHR18964 14 145 5.4E-60 T 26-04-2016 PAM18_RS26965 897c9d3633b9f27494c0f24081323bf9 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 26-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site PAM18_RS13365 d9dac896573449b5740342edd24ad7b4 346 PANTHER PTHR10264 119 293 1.1E-22 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS13365 d9dac896573449b5740342edd24ad7b4 346 PANTHER PTHR10264 11 91 1.1E-22 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS13365 d9dac896573449b5740342edd24ad7b4 346 SMART SM00244 38 242 5.3E-4 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS13365 d9dac896573449b5740342edd24ad7b4 346 Pfam PF01145 SPFH domain / Band 7 family 42 259 8.4E-21 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Gene3D G3DSA:3.40.50.2300 782 914 5.5E-37 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SUPERFAMILY SSF55874 461 633 5.37E-49 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Pfam PF07695 7TM diverse intracellular signalling 183 383 5.2E-35 T 26-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 3.0E-18 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 3.0E-18 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 3.0E-18 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 3.0E-18 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SMART SM00387 519 635 8.2E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423:SF548 399 638 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423:SF548 78 103 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423:SF548 773 911 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423 399 638 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423 78 103 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 PANTHER PTHR24423 773 911 2.9E-213 T 26-04-2016 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 472 1.8E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Gene3D G3DSA:1.10.287.130 399 468 6.9E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Gene3D G3DSA:3.30.565.10 473 636 2.3E-50 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SUPERFAMILY SSF47384 395 473 3.73E-20 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Pfam PF07696 7TMR-DISM extracellular 2 36 168 3.0E-32 T 26-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SUPERFAMILY SSF52172 789 913 1.71E-34 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SMART SM00388 407 472 2.6E-23 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 634 3.4E-30 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 Pfam PF00072 Response regulator receiver domain 791 907 7.3E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS07730 0a4a92bb22c47b2577f90a6df6bc01f2 918 SMART SM00448 789 907 3.4E-34 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 170 9.3E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 42 170 2.5E-17 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:3.40.50.1000 4 24 2.1E-32 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:3.40.50.1000 64 194 2.1E-32 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 PANTHER PTHR18901 1 196 1.8E-106 T 26-04-2016 PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 SUPERFAMILY SSF56784 5 195 2.04E-38 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 164 2.9E-9 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS05075 b4e3cdf7dcb74bc003ad80259969a060 198 PANTHER PTHR18901:SF25 1 196 1.8E-106 T 26-04-2016 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 PANTHER PTHR33280:SF3 1 82 3.0E-40 T 26-04-2016 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 SUPERFAMILY SSF143800 1 81 8.63E-22 T 26-04-2016 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-14 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-14 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-14 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 Pfam PF01197 Ribosomal protein L31 1 79 8.5E-25 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 PANTHER PTHR33280 1 82 3.0E-40 T 26-04-2016 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.2E-15 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07125 faf7928de45393bdfbb2d774e79f1151 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.038 T 26-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 311 44.044 T 26-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 Gene3D G3DSA:3.40.800.10 5 310 7.5E-105 T 26-04-2016 IPR023696 Ureohydrolase domain PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 PANTHER PTHR11358 1 311 1.2E-145 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 311 4.0E-129 T 26-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 Pfam PF00491 Arginase family 40 309 9.0E-62 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 PANTHER PTHR11358:SF35 1 311 1.2E-145 T 26-04-2016 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 SUPERFAMILY SSF52768 9 310 3.78E-82 T 26-04-2016 PAM18_RS09210 2ab7cf5cbd87ed33c9b1cef007e28527 311 PIRSF PIRSF036979 16 311 1.1E-27 T 26-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 Gene3D G3DSA:3.10.129.10 2 108 8.4E-21 T 26-04-2016 IPR029069 HotDog domain PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 Gene3D G3DSA:3.10.129.10 125 259 3.0E-10 T 26-04-2016 IPR029069 HotDog domain PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 1 108 1.23E-25 T 26-04-2016 IPR029069 HotDog domain PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 PANTHER PTHR11066 19 259 9.8E-30 T 26-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 123 263 2.4E-27 T 26-04-2016 IPR029069 HotDog domain PAM18_RS10730 c0c672958b9ccf28e91fa3723fcfca0c 265 Pfam PF13622 Thioesterase-like superfamily 20 263 1.8E-52 T 26-04-2016 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 SUPERFAMILY SSF81452 18 207 5.49E-60 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 PANTHER PTHR11403 12 209 2.1E-120 T 26-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 209 5.4E-86 T 26-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 Pfam PF00510 Cytochrome c oxidase subunit III 20 207 8.6E-17 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 Gene3D G3DSA:1.20.120.80 29 207 5.4E-52 T 26-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PAM18_RS18350 f7a0f7666fc6327d47dec39f4c091c38 209 PANTHER PTHR11403:SF2 12 209 2.1E-120 T 26-04-2016 PAM18_RS17070 93b02df6e016edd384c83a8f913b3921 432 Gene3D G3DSA:2.60.200.20 1 59 3.0E-4 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS17070 93b02df6e016edd384c83a8f913b3921 432 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 164 415 1.2E-94 T 26-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain PAM18_RS17070 93b02df6e016edd384c83a8f913b3921 432 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 415 2.1E-79 T 26-04-2016 IPR012843 Type III secretion system YscD/HrpQ PAM18_RS17070 93b02df6e016edd384c83a8f913b3921 432 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 9.5E-20 T 26-04-2016 IPR032030 YscD, cytoplasmic domain PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 SUPERFAMILY SSF52172 5 148 1.71E-28 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 PANTHER PTHR26402 6 159 7.9E-25 T 26-04-2016 PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 Gene3D G3DSA:3.30.70.270 155 311 5.8E-14 T 26-04-2016 PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 SMART SM00267 142 310 2.3E-5 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 Gene3D G3DSA:3.40.50.2300 6 127 4.9E-27 T 26-04-2016 PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 282 4.6E-12 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 SMART SM00448 6 122 1.1E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 SUPERFAMILY SSF55073 158 310 5.57E-12 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS22930 80c806b62a429dbfeb73cd1a88705021 321 Pfam PF00072 Response regulator receiver domain 8 122 1.6E-21 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Gene3D G3DSA:3.40.47.10 145 185 1.9E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Gene3D G3DSA:3.40.47.10 262 376 1.9E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 SUPERFAMILY SSF53901 5 253 6.26E-67 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 PIRSF PIRSF000429 1 379 8.3E-117 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Pfam PF00108 Thiolase, N-terminal domain 6 248 1.1E-59 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 ProSitePatterns PS00737 Thiolases signature 2. 324 340 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 376 7.5E-124 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 PANTHER PTHR18919:SF69 1 379 2.0E-167 T 26-04-2016 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Gene3D G3DSA:3.40.47.10 186 261 9.3E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Gene3D G3DSA:3.40.47.10 5 127 9.3E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 PANTHER PTHR18919 1 379 2.0E-167 T 26-04-2016 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 Pfam PF02803 Thiolase, C-terminal domain 256 376 5.6E-45 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS10380 29a8626041984b508b2ae58dd6f697a3 379 SUPERFAMILY SSF53901 257 376 8.35E-43 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 SUPERFAMILY SSF51905 19 229 3.31E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 Gene3D G3DSA:3.50.50.60 16 185 9.6E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 Gene3D G3DSA:3.50.50.60 385 441 9.6E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PANTHER PTHR23023:SF4 17 223 3.5E-75 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PANTHER PTHR23023:SF4 274 418 3.5E-75 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 23 211 3.1E-27 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 SUPERFAMILY SSF51905 182 418 2.11E-7 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 Gene3D G3DSA:3.50.50.60 186 222 2.7E-4 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-9 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 21 43 2.6E-9 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 2.6E-9 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PANTHER PTHR23023 17 223 3.5E-75 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PANTHER PTHR23023 274 418 3.5E-75 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 3.3E-5 T 26-04-2016 PAM18_RS28185 5dae91db68aeb938447c4751e36046be 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 3.3E-5 T 26-04-2016 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 PANTHER PTHR30443 1 563 0.0 T 26-04-2016 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 Pfam PF08019 Domain of unknown function (DUF1705) 54 203 1.9E-52 T 26-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 SUPERFAMILY SSF53649 234 535 4.36E-23 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 Pfam PF00884 Sulfatase 233 521 8.1E-53 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 Gene3D G3DSA:3.40.720.10 234 525 1.8E-12 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS15750 82c9fbf867a5a260ec5daa1c6c6f2ac0 567 PANTHER PTHR30443:SF0 1 563 0.0 T 26-04-2016 PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.7E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.7E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 SUPERFAMILY SSF51735 4 250 1.9E-72 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 1.2E-55 T 26-04-2016 PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 5.1E-5 T 26-04-2016 PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 Gene3D G3DSA:3.40.50.720 2 250 7.6E-80 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22895 e5396bf928a513de5af6b83f02d5250c 252 PANTHER PTHR24322 10 194 3.5E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.3E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.3E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.357.10 75 216 1.2E-56 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 4.8E-13 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF46689 16 95 6.67E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 PANTHER PTHR30055:SF42 11 216 2.2E-92 T 26-04-2016 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 PANTHER PTHR30055 11 216 2.2E-92 T 26-04-2016 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF48498 92 216 2.19E-43 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF08362 YcdC-like protein, C-terminal region 75 216 1.7E-53 T 26-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PAM18_RS00845 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.10.60 19 74 4.5E-20 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 Gene3D G3DSA:3.10.350.10 174 231 3.1E-5 T 26-04-2016 IPR018392 LysM domain PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 182 254 1.2E-30 T 26-04-2016 IPR020012 Motility protein FimV, N-terminal PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 Gene3D G3DSA:1.25.40.10 869 909 2.9E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 Gene3D G3DSA:1.25.40.10 550 593 2.9E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 Gene3D G3DSA:1.25.40.10 662 675 2.9E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 SMART SM00257 175 230 0.0037 T 26-04-2016 IPR018392 LysM domain PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 875 918 1.9E-21 T 26-04-2016 IPR020011 Motility protein FimV, C-terminal PAM18_RS09490 21e57112887629f07e467828b2913bf4 919 SUPERFAMILY SSF48452 551 607 2.85E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PANTHER PTHR32063:SF13 1 1039 0.0 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:3.30.70.1430 569 671 2.7E-36 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 26-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:1.10.3850.10 816 1027 6.7E-57 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82866 808 1027 1.96E-46 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82693 135 182 2.04E-26 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82693 274 330 2.04E-26 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.3E-113 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:3.30.70.1430 38 140 2.9E-36 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:1.20.1640.10 291 507 1.4E-60 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82714 724 811 7.06E-23 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82693 38 130 1.8E-28 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82866 296 497 1.07E-49 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 PANTHER PTHR32063 1 1039 0.0 T 26-04-2016 PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82714 182 271 1.07E-22 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:3.30.2090.10 181 275 2.0E-26 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 Gene3D G3DSA:3.30.2090.10 723 812 3.0E-26 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS02155 4660f4f5d7d50a038fa70d58c2a1b89c 1046 SUPERFAMILY SSF82693 567 671 1.31E-30 T 26-04-2016 PAM18_RS26165 91cee88dacbc47da6df048029c480800 294 PANTHER PTHR22916 1 220 1.8E-55 T 26-04-2016 PAM18_RS26165 91cee88dacbc47da6df048029c480800 294 Pfam PF00535 Glycosyl transferase family 2 13 180 1.3E-29 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS26165 91cee88dacbc47da6df048029c480800 294 SUPERFAMILY SSF53448 8 225 1.22E-55 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS26165 91cee88dacbc47da6df048029c480800 294 Gene3D G3DSA:3.90.550.10 10 227 3.9E-54 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 Pfam PF00591 Glycosyl transferase family, a/b domain 75 329 2.1E-101 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 64 3.8E-19 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 338 3.5E-121 T 26-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 SUPERFAMILY SSF47648 1 67 2.88E-21 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 Gene3D G3DSA:1.20.970.10 1 66 1.7E-25 T 26-04-2016 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 SUPERFAMILY SSF52418 75 340 2.62E-87 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 38.436 T 26-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 PANTHER PTHR11922:SF5 1 340 3.2E-104 T 26-04-2016 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 PANTHER PTHR11922 1 340 3.2E-104 T 26-04-2016 PAM18_RS03200 9f19632ea3694dd480ad12a85f3001da 349 Gene3D G3DSA:3.40.1030.10 75 340 1.4E-97 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS03750 96cf78088538890e18a7c141bbc2d168 388 SUPERFAMILY SSF50974 7 353 3.66E-50 T 26-04-2016 IPR011045 Nitrous oxide reductase, N-terminal PAM18_RS03750 96cf78088538890e18a7c141bbc2d168 388 PANTHER PTHR30344 3 388 2.0E-130 T 26-04-2016 PAM18_RS03750 96cf78088538890e18a7c141bbc2d168 388 PANTHER PTHR30344:SF1 3 388 2.0E-130 T 26-04-2016 PAM18_RS03750 96cf78088538890e18a7c141bbc2d168 388 Gene3D G3DSA:2.130.10.10 28 385 2.0E-97 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS03750 96cf78088538890e18a7c141bbc2d168 388 Pfam PF10282 Lactonase, 7-bladed beta-propeller 30 384 2.1E-113 T 26-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 PANTHER PTHR22769:SF32 17 199 9.4E-66 T 26-04-2016 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 PANTHER PTHR22769 17 199 9.4E-66 T 26-04-2016 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 11 62 2.2E-13 T 26-04-2016 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 PRINTS PR00502 NUDIX hydrolase family signature 112 127 8.5E-5 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 PRINTS PR00502 NUDIX hydrolase family signature 98 112 8.5E-5 T 26-04-2016 IPR020476 NUDIX hydrolase PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 Pfam PF00293 NUDIX domain 74 184 1.1E-19 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 ProSitePatterns PS00893 Nudix box signature. 103 124 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 Gene3D G3DSA:3.90.79.10 67 199 1.8E-30 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS20715 e97c2e95970e4a21f4cbe571da30fef9 212 SUPERFAMILY SSF55811 67 204 4.33E-32 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 8.6E-113 T 26-04-2016 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 Hamap MF_00443 Thiazole synthase [thiG]. 10 265 42.991 T 26-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 PANTHER PTHR34266 5 265 7.2E-158 T 26-04-2016 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 PANTHER PTHR34266:SF2 5 265 7.2E-158 T 26-04-2016 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 SUPERFAMILY SSF110399 10 251 6.28E-92 T 26-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 PAM18_RS01925 8ce9195bac449c10ce8b77f07b47470e 265 Gene3D G3DSA:3.20.20.70 19 240 2.9E-53 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 PANTHER PTHR11019:SF85 8 254 2.3E-119 T 26-04-2016 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 5.1E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 5.1E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 SUPERFAMILY SSF46689 152 196 9.68E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 PANTHER PTHR11019 8 254 2.3E-119 T 26-04-2016 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 SUPERFAMILY SSF46689 199 249 1.7E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 SMART SM00342 163 246 1.5E-28 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 Gene3D G3DSA:1.10.10.60 151 200 2.4E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 SUPERFAMILY SSF51182 17 130 1.06E-6 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 Pfam PF12833 Helix-turn-helix domain 169 247 1.1E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 Gene3D G3DSA:2.60.120.10 12 70 2.3E-6 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS08980 840601bd7511eee4a915da504fc191f0 254 Gene3D G3DSA:1.10.10.60 201 249 1.1E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 120 275 7.1E-20 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 274 5.0E-32 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 Pfam PF00563 EAL domain 298 533 5.5E-73 T 26-04-2016 IPR001633 EAL domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 Gene3D G3DSA:3.20.20.450 296 543 6.5E-96 T 26-04-2016 IPR001633 EAL domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 SUPERFAMILY SSF141868 298 543 1.18E-87 T 26-04-2016 IPR001633 EAL domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 SMART SM00267 113 282 9.8E-39 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 PANTHER PTHR33121 279 543 2.5E-77 T 26-04-2016 PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 PANTHER PTHR33121:SF13 279 543 2.5E-77 T 26-04-2016 PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 SMART SM00052 292 538 7.1E-110 T 26-04-2016 IPR001633 EAL domain PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 Gene3D G3DSA:3.30.70.270 126 288 1.8E-42 T 26-04-2016 PAM18_RS27670 2b5f3ac96193cb62ec75c46efc310d57 558 SUPERFAMILY SSF55073 129 284 1.65E-36 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 PANTHER PTHR10120 445 481 1.3E-62 T 26-04-2016 PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 Gene3D G3DSA:3.30.2010.10 223 314 1.1E-11 T 26-04-2016 PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 PANTHER PTHR10120:SF19 445 481 1.3E-62 T 26-04-2016 PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 PANTHER PTHR10120:SF19 221 413 1.3E-62 T 26-04-2016 PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 PANTHER PTHR10120 221 413 1.3E-62 T 26-04-2016 PAM18_RS14155 564276e7bfb45a11911235fd58b2c6ce 514 Pfam PF01435 Peptidase family M48 280 459 5.1E-13 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS10435 b045ea49b97b6733988ee15a151036ff 204 PIRSF PIRSF006324 1 203 3.2E-45 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS10435 b045ea49b97b6733988ee15a151036ff 204 PANTHER PTHR30086:SF2 1 204 2.1E-90 T 26-04-2016 PAM18_RS10435 b045ea49b97b6733988ee15a151036ff 204 Pfam PF01810 LysE type translocator 14 200 8.7E-30 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS10435 b045ea49b97b6733988ee15a151036ff 204 PANTHER PTHR30086 1 204 2.1E-90 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS26830 35756c14d6c327878114578c5e491376 428 PANTHER PTHR21666 33 423 3.1E-46 T 26-04-2016 PAM18_RS26830 35756c14d6c327878114578c5e491376 428 Pfam PF01551 Peptidase family M23 327 420 4.0E-25 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS26830 35756c14d6c327878114578c5e491376 428 Gene3D G3DSA:2.70.70.10 297 425 6.2E-36 T 26-04-2016 PAM18_RS26830 35756c14d6c327878114578c5e491376 428 PANTHER PTHR21666:SF108 33 423 3.1E-46 T 26-04-2016 PAM18_RS26830 35756c14d6c327878114578c5e491376 428 SUPERFAMILY SSF51261 239 424 5.62E-47 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS19760 8dee4e4cea82ece7d7ddb46cc7eeb6b5 262 PANTHER PTHR22946 4 261 2.7E-83 T 26-04-2016 PAM18_RS19760 8dee4e4cea82ece7d7ddb46cc7eeb6b5 262 Gene3D G3DSA:3.40.50.1820 20 256 9.5E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19760 8dee4e4cea82ece7d7ddb46cc7eeb6b5 262 Pfam PF01738 Dienelactone hydrolase family 37 258 1.4E-47 T 26-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 PAM18_RS19760 8dee4e4cea82ece7d7ddb46cc7eeb6b5 262 PANTHER PTHR22946:SF0 4 261 2.7E-83 T 26-04-2016 PAM18_RS19760 8dee4e4cea82ece7d7ddb46cc7eeb6b5 262 SUPERFAMILY SSF53474 21 258 1.16E-43 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 26-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 160 186 1.5E-21 T 26-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 1.5E-21 T 26-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-21 T 26-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 202 214 1.5E-21 T 26-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 Pfam PF00459 Inositol monophosphatase family 1 258 1.1E-66 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.40.190.80 153 264 3.7E-40 T 26-04-2016 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.30.540.10 2 152 3.0E-51 T 26-04-2016 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 SUPERFAMILY SSF56655 1 265 1.31E-84 T 26-04-2016 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 26-04-2016 IPR020583 Inositol monophosphatase, metal-binding site PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PANTHER PTHR20854:SF4 1 262 2.1E-99 T 26-04-2016 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PANTHER PTHR20854 1 262 2.1E-99 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS05685 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 2.6E-62 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.0E-161 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.60.20.10 2 257 2.8E-61 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF53271 250 483 1.27E-70 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.286 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 PIRSF PIRSF000485 1 481 7.5E-159 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF13522 Glutamine amidotransferase domain 64 208 5.3E-15 T 26-04-2016 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF00156 Phosphoribosyl transferase domain 276 393 5.3E-9 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF56235 2 257 4.55E-70 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS09525 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.40.50.2020 271 444 8.2E-46 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 SMART SM00267 501 671 1.7E-56 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 Gene3D G3DSA:3.30.70.270 513 670 7.5E-57 T 26-04-2016 PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 PANTHER PTHR10799 544 668 2.4E-25 T 26-04-2016 PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 PANTHER PTHR10799 354 403 2.4E-25 T 26-04-2016 PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 667 1.0E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 670 6.9E-48 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 SUPERFAMILY SSF55073 516 669 2.04E-48 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 PANTHER PTHR10799:SF750 544 668 2.4E-25 T 26-04-2016 PAM18_RS28665 3b44a11f3db57a4359ef986ce3aa26ea 671 PANTHER PTHR10799:SF750 354 403 2.4E-25 T 26-04-2016 PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 PIRSF PIRSF006113 15 135 1.4E-51 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 20 134 1.7E-38 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 PANTHER PTHR12589 8 135 1.9E-55 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 Gene3D G3DSA:3.30.479.10 16 134 1.2E-43 T 26-04-2016 PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 SUPERFAMILY SSF55620 18 134 4.28E-43 T 26-04-2016 PAM18_RS11855 957382efd15ab26caf7c9de55fedc64e 135 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 19 111 3.0E-34 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 Gene3D G3DSA:3.30.360.10 159 312 3.1E-60 T 26-04-2016 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.952 T 26-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 SUPERFAMILY SSF51735 2 172 1.74E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 315 6.1E-17 T 26-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 SMART SM00859 3 142 8.1E-64 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 26-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 SUPERFAMILY SSF55347 150 312 1.09E-51 T 26-04-2016 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 4.6E-38 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 1.8E-132 T 26-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 PANTHER PTHR32338:SF8 1 344 3.2E-185 T 26-04-2016 PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 Gene3D G3DSA:3.40.50.720 1 158 1.6E-65 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03260 5f863bd2a6ba00d2581708d869705f97 344 PANTHER PTHR32338 1 344 3.2E-185 T 26-04-2016 PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 PANTHER PTHR22953 219 382 1.1E-185 T 26-04-2016 PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 PANTHER PTHR22953 1 190 1.1E-185 T 26-04-2016 PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 PANTHER PTHR22953:SF40 219 382 1.1E-185 T 26-04-2016 PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 PANTHER PTHR22953:SF40 1 190 1.1E-185 T 26-04-2016 PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 Gene3D G3DSA:3.60.21.10 136 519 2.3E-34 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 SUPERFAMILY SSF56300 137 517 7.78E-45 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 Pfam PF09423 PhoD-like phosphatase 148 501 2.2E-87 T 26-04-2016 IPR018946 Alkaline phosphatase D-related PAM18_RS05230 9b839762c83b82d03bf154d581b7de38 520 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 42 128 1.2E-17 T 26-04-2016 IPR032093 Phospholipase D, N-terminal PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 SUPERFAMILY SSF69593 262 523 6.93E-32 T 26-04-2016 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PANTHER PTHR12563:SF14 1 130 0.0 T 26-04-2016 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PANTHER PTHR12563:SF14 149 823 0.0 T 26-04-2016 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PIRSF PIRSF500064 4 829 0.0 T 26-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 812 0.0 T 26-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PIRSF PIRSF000437 21 827 0.0 T 26-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 816 31.927 T 26-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 SMART SM00563 304 431 9.4E-27 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 Pfam PF01553 Acyltransferase 292 428 8.3E-20 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PANTHER PTHR12563 1 130 0.0 T 26-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS06445 2c8a70d651208f327b3bedd8454f5486 834 PANTHER PTHR12563 149 823 0.0 T 26-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.1E-39 T 26-04-2016 IPR031309 Ribosomal protein L5, C-terminal PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 PANTHER PTHR11994 1 178 9.7E-97 T 26-04-2016 PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 PIRSF PIRSF002161 1 179 3.3E-64 T 26-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 Gene3D G3DSA:3.30.1440.10 1 179 3.7E-77 T 26-04-2016 IPR022803 Ribosomal protein L5 domain PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 26-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.121 T 26-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 Pfam PF00281 Ribosomal protein L5 24 80 6.1E-29 T 26-04-2016 IPR031310 Ribosomal protein L5, N-terminal PAM18_RS03485 d099d5dc95938583016e3358d4355599 179 SUPERFAMILY SSF55282 3 179 1.22E-77 T 26-04-2016 IPR022803 Ribosomal protein L5 domain PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Gene3D G3DSA:1.25.40.10 118 201 4.7E-11 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Pfam PF14561 Tetratricopeptide repeat 200 289 5.4E-27 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Gene3D G3DSA:3.40.30.10 7 111 3.1E-34 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PANTHER PTHR10438:SF264 7 114 8.3E-37 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PANTHER PTHR10438:SF264 210 231 8.3E-37 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Pfam PF00085 Thioredoxin 9 109 1.7E-27 T 26-04-2016 IPR013766 Thioredoxin domain GO:0045454 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 SUPERFAMILY SSF48452 225 247 6.64E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 SUPERFAMILY SSF48452 125 190 6.64E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 SUPERFAMILY SSF52833 5 113 7.72E-37 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PRINTS PR00421 Thioredoxin family signature 28 36 1.5E-7 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PRINTS PR00421 Thioredoxin family signature 76 87 1.5E-7 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PRINTS PR00421 Thioredoxin family signature 36 45 1.5E-7 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Gene3D G3DSA:1.25.40.10 202 289 1.2E-29 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 Pfam PF14559 Tetratricopeptide repeat 129 195 3.7E-11 T 26-04-2016 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 110 1.7E-30 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PANTHER PTHR10438 7 114 8.3E-37 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS04480 137ef78d654d7e8d2dbc0701bf04a352 289 PANTHER PTHR10438 210 231 8.3E-37 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS22545 8e6819d70f07b4bbb7f832f552a13f74 427 Pfam PF14258 Domain of unknown function (DUF4350) 44 113 3.8E-13 T 26-04-2016 IPR025646 Domain of unknown function DUF4350 PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 Gene3D G3DSA:3.90.260.10 286 589 2.7E-55 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 Pfam PF13559 Domain of unknown function (DUF4129) 581 642 1.5E-10 T 26-04-2016 IPR025403 Domain of unknown function DUF4129 PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 SMART SM00460 396 467 3.2E-20 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 Pfam PF01841 Transglutaminase-like superfamily 349 465 1.5E-23 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 SUPERFAMILY SSF54001 270 600 2.38E-74 T 26-04-2016 PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 PANTHER PTHR33490 1 666 1.0E-180 T 26-04-2016 PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 Pfam PF11992 Domain of unknown function (DUF3488) 9 321 3.6E-108 T 26-04-2016 IPR021878 Protein of unknown function DUF3488 PAM18_RS10720 9e9a249875a9ff65c895daa3b51c9fb6 668 PANTHER PTHR33490:SF4 1 666 1.0E-180 T 26-04-2016 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 SUPERFAMILY SSF52096 27 210 6.84E-76 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 26-04-2016 IPR018215 ClpP, Ser active site PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 Pfam PF00574 Clp protease 29 208 1.2E-88 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 207 8.4E-105 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PANTHER PTHR10381:SF22 3 209 6.0E-145 T 26-04-2016 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 26-04-2016 IPR033135 ClpP, histidine active site PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PANTHER PTHR10381 3 209 6.0E-145 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 43.732 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 Gene3D G3DSA:3.90.226.10 19 209 3.9E-91 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 2.0E-52 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 2.0E-52 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 2.0E-52 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 2.0E-52 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS16615 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 2.0E-52 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 19 213 25.907 T 26-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 21 205 1.6E-35 T 26-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 Gene3D G3DSA:3.10.300.10 16 219 2.0E-42 T 26-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 SUPERFAMILY SSF50486 15 220 2.43E-53 T 26-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 PANTHER PTHR10429:SF0 3 229 9.3E-58 T 26-04-2016 PAM18_RS04730 7ee13ff25ae488880b569ebfee5a825d 239 PANTHER PTHR10429 3 229 9.3E-58 T 26-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 671 8.3E-47 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 Gene3D G3DSA:1.10.287.950 426 641 7.4E-56 T 26-04-2016 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 399 449 78.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 344 396 5.4E-6 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00672 HAMP domain 328 392 4.1E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 PANTHER PTHR32089 249 673 1.3E-139 T 26-04-2016 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 PANTHER PTHR32089:SF34 249 673 1.3E-139 T 26-04-2016 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 SUPERFAMILY SSF58104 364 673 1.44E-74 T 26-04-2016 PAM18_RS23550 eb2ba94225fc699254944b829a0adf15 673 SMART SM00283 411 672 3.7E-72 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 SUPERFAMILY SSF46785 3 139 4.29E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 PANTHER PTHR33164:SF8 6 139 3.9E-58 T 26-04-2016 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 SMART SM00347 29 129 3.2E-18 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 PANTHER PTHR33164 6 139 3.9E-58 T 26-04-2016 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 Pfam PF01047 MarR family 36 93 3.9E-13 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 Gene3D G3DSA:1.10.10.10 5 139 6.7E-40 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.4E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.4E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17650 c6ebff03f360dbf73055614c30636149 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.4E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS24260 0e14fcfb025451b896c89911cac24855 262 Gene3D G3DSA:2.60.40.360 32 156 1.4E-16 T 26-04-2016 IPR008962 PapD-like PAM18_RS24260 0e14fcfb025451b896c89911cac24855 262 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 156 2.5E-17 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS24260 0e14fcfb025451b896c89911cac24855 262 PANTHER PTHR30251:SF4 2 234 8.4E-56 T 26-04-2016 PAM18_RS24260 0e14fcfb025451b896c89911cac24855 262 PANTHER PTHR30251 2 234 8.4E-56 T 26-04-2016 PAM18_RS24260 0e14fcfb025451b896c89911cac24855 262 SUPERFAMILY SSF49354 32 161 2.51E-26 T 26-04-2016 IPR008962 PapD-like PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55658 1 56 4.53E-18 T 26-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.3E-20 T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.3E-23 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.10.430.100 60 148 7.0E-26 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 PANTHER PTHR21368 1 148 8.7E-50 T 26-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55653 60 148 4.45E-24 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.4E-48 T 26-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.40.5.10 1 52 1.4E-23 T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal PAM18_RS25805 445d0d63298a5433fb056e824415a552 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.083 T 26-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27505 09b02508b4446bef68a4bc20fbbd606d 358 Gene3D G3DSA:3.30.565.10 217 298 3.4E-4 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27505 09b02508b4446bef68a4bc20fbbd606d 358 PANTHER PTHR34220:SF3 11 357 7.6E-117 T 26-04-2016 PAM18_RS27505 09b02508b4446bef68a4bc20fbbd606d 358 Pfam PF06580 Histidine kinase 163 241 3.0E-23 T 26-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 PAM18_RS27505 09b02508b4446bef68a4bc20fbbd606d 358 PANTHER PTHR34220 11 357 7.6E-117 T 26-04-2016 PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.5E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.5E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.5E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PANTHER PTHR24322:SF57 145 176 2.7E-48 T 26-04-2016 PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PANTHER PTHR24322:SF57 8 129 2.7E-48 T 26-04-2016 PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 SUPERFAMILY SSF51735 4 236 4.03E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PANTHER PTHR24322 145 176 2.7E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PANTHER PTHR24322 8 129 2.7E-48 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 Gene3D G3DSA:3.40.50.720 3 268 7.2E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.2E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.2E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.2E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS05375 2871f07aaa97883a5e7776060ed94d82 276 Pfam PF00106 short chain dehydrogenase 5 188 2.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF55781 68 199 4.12E-9 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.30.450.40 158 195 6.9E-4 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 420 435 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Pfam PF02954 Bacterial regulatory protein, Fis family 595 636 6.3E-14 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.30.450.20 236 317 1.2E-7 T 26-04-2016 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF55785 235 313 1.44E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:1.10.8.60 507 576 5.8E-14 T 26-04-2016 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 602 619 1.6E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 639 1.6E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:3.40.50.300 344 505 2.2E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 PANTHER PTHR32071:SF5 293 642 1.8E-176 T 26-04-2016 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF46689 542 638 9.86E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Gene3D G3DSA:1.10.10.60 593 635 5.1E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 SMART SM00382 353 496 7.3E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 SUPERFAMILY SSF52540 346 571 2.73E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 Pfam PF00158 Sigma-54 interaction domain 340 498 1.6E-59 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS04675 778304d7eec4c77a2b615ff68f1be435 643 PANTHER PTHR32071 293 642 1.8E-176 T 26-04-2016 PAM18_RS11180 3a6cf4821e7da9a234806afedebbde72 155 Pfam PF01590 GAF domain 16 146 3.1E-7 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS11180 3a6cf4821e7da9a234806afedebbde72 155 Gene3D G3DSA:3.30.450.40 6 142 1.3E-11 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS11180 3a6cf4821e7da9a234806afedebbde72 155 SUPERFAMILY SSF55781 12 146 5.33E-13 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS09325 11875bb13a19d8b1bb10d3fd78b5026c 320 PANTHER PTHR10366:SF329 5 320 5.0E-104 T 26-04-2016 PAM18_RS09325 11875bb13a19d8b1bb10d3fd78b5026c 320 SUPERFAMILY SSF51735 4 319 1.6E-70 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09325 11875bb13a19d8b1bb10d3fd78b5026c 320 Gene3D G3DSA:3.40.50.720 5 313 7.8E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09325 11875bb13a19d8b1bb10d3fd78b5026c 320 PANTHER PTHR10366 5 320 5.0E-104 T 26-04-2016 PAM18_RS09325 11875bb13a19d8b1bb10d3fd78b5026c 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 227 6.2E-35 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 SUPERFAMILY SSF53901 4 334 1.86E-43 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 334 1.1E-25 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 PANTHER PTHR34069 5 342 9.0E-71 T 26-04-2016 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 PANTHER PTHR34069:SF2 5 342 9.0E-71 T 26-04-2016 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 Gene3D G3DSA:3.40.47.10 5 161 3.5E-31 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 Gene3D G3DSA:3.40.47.10 162 190 4.2E-41 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 Gene3D G3DSA:3.40.47.10 222 335 4.2E-41 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20195 c8703c9d10542c52556be76e1dc27a04 346 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 3.8E-7 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS11130 ba606039c40cdd58c3f98067c1d23dfe 197 SUPERFAMILY SSF52499 9 195 1.44E-44 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS11130 ba606039c40cdd58c3f98067c1d23dfe 197 PANTHER PTHR11080 3 196 2.9E-31 T 26-04-2016 PAM18_RS11130 ba606039c40cdd58c3f98067c1d23dfe 197 Gene3D G3DSA:3.40.50.850 9 195 4.1E-45 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS11130 ba606039c40cdd58c3f98067c1d23dfe 197 Pfam PF00857 Isochorismatase family 12 187 9.0E-34 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.2E-37 T 26-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-40 T 26-04-2016 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 SUPERFAMILY SSF47060 3 89 2.68E-34 T 26-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 Gene3D G3DSA:1.10.287.10 3 89 2.2E-37 T 26-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 Pfam PF00312 Ribosomal protein S15 8 88 4.6E-36 T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.97 T 26-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 SMART SM01387 8 88 5.2E-50 T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 PANTHER PTHR23321 1 89 5.7E-45 T 26-04-2016 PAM18_RS24825 31be409f61215d3456c3847c96991c27 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PIRSF PIRSF000303 1 184 3.1E-56 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 Pfam PF00255 Glutathione peroxidase 40 134 1.7E-21 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PANTHER PTHR11592 18 184 1.4E-102 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 49 64 - T 26-04-2016 IPR029759 Glutathione peroxidase active site PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 Gene3D G3DSA:3.40.30.10 33 181 9.4E-45 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PANTHER PTHR11592:SF31 18 184 1.4E-102 T 26-04-2016 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 SUPERFAMILY SSF52833 34 180 2.32E-42 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 47 64 2.9E-9 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 142 151 2.9E-9 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS19140 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 82 98 2.9E-9 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 8.5E-66 T 26-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 26-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 Gene3D G3DSA:3.10.180.10 1 126 2.1E-46 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 3.1E-23 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 PANTHER PTHR10374 1 125 2.9E-61 T 26-04-2016 PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 SUPERFAMILY SSF54593 1 126 2.01E-36 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS07525 1b9335d0850d0d92c3d5c4a3e61a5cf8 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 26-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 PANTHER PTHR11262:SF3 3 104 1.0E-204 T 26-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 PANTHER PTHR11262:SF3 218 447 1.0E-204 T 26-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 SMART SM01086 335 433 3.6E-15 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 42.096 T 26-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 PANTHER PTHR11262 3 104 1.0E-204 T 26-04-2016 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 PANTHER PTHR11262 218 447 1.0E-204 T 26-04-2016 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 137 1.9E-7 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 447 3.5E-210 T 26-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 SUPERFAMILY SSF52540 3 445 2.83E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:1.10.8.10 110 177 3.8E-29 T 26-04-2016 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:1.10.8.10 213 243 3.8E-29 T 26-04-2016 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 SMART SM00382 48 332 2.6E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 7.9E-40 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:1.10.8.60 335 447 1.9E-29 T 26-04-2016 PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:3.40.50.300 3 109 1.2E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26435 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:3.40.50.300 245 331 1.2E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.0E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 3.0E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.0E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 3.0E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PANTHER PTHR10992 9 264 3.3E-65 T 26-04-2016 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 PANTHER PTHR10992:SF771 9 264 3.3E-65 T 26-04-2016 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 Pfam PF00561 alpha/beta hydrolase fold 35 143 5.7E-18 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 Gene3D G3DSA:3.40.50.1820 8 263 1.8E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 15 262 3.2E-81 T 26-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS02430 513f39b5cfc61c8f04180d786a2daf7b 265 SUPERFAMILY SSF53474 8 262 2.46E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PANTHER PTHR22773:SF40 1 492 4.5E-189 T 26-04-2016 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 497 2.8E-176 T 26-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PANTHER PTHR22773 1 492 4.5E-189 T 26-04-2016 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.0E-36 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 2.0E-36 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 2.0E-36 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 2.0E-36 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 2.0E-36 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS11955 ebef48909fe9094a062499c0a360f2cd 509 Pfam PF00361 Proton-conducting membrane transporter 134 433 4.3E-72 T 26-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 Gene3D G3DSA:3.40.50.720 403 490 1.1E-7 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 SUPERFAMILY SSF51735 403 491 1.38E-7 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 PANTHER PTHR32507 1 608 1.3E-194 T 26-04-2016 PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 PANTHER PTHR32507:SF0 1 608 1.3E-194 T 26-04-2016 PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 Pfam PF00999 Sodium/hydrogen exchanger family 14 390 7.5E-37 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS06110 c1c8788bec78c1825240840b158a0b48 611 Pfam PF02254 TrkA-N domain 403 493 1.5E-5 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 PANTHER PTHR23004:SF7 24 200 2.7E-79 T 26-04-2016 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 197 1.4E-57 T 26-04-2016 IPR010323 Protein of unknown function DUF924 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 SUPERFAMILY SSF48452 3 196 9.48E-56 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 PANTHER PTHR23004 24 200 2.7E-79 T 26-04-2016 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.20.58.320 6 89 1.6E-18 T 26-04-2016 PAM18_RS26705 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.25.40.10 91 200 1.7E-34 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS01710 9251c75ec8c0c653be90aac72eead842 251 Pfam PF05742 Transport and Golgi organisation 2 1 234 4.1E-57 T 26-04-2016 IPR008551 Transport and Golgi organisation protein 2 PAM18_RS01710 9251c75ec8c0c653be90aac72eead842 251 PANTHER PTHR17985 2 236 1.6E-79 T 26-04-2016 IPR008551 Transport and Golgi organisation protein 2 PAM18_RS01750 24f8f9cb71c7f66b322995104075a469 383 PANTHER PTHR23344:SF7 51 383 4.3E-124 T 26-04-2016 PAM18_RS01750 24f8f9cb71c7f66b322995104075a469 383 SUPERFAMILY SSF51695 55 380 8.89E-77 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS01750 24f8f9cb71c7f66b322995104075a469 383 PANTHER PTHR23344 51 383 4.3E-124 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS01750 24f8f9cb71c7f66b322995104075a469 383 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 60 374 1.5E-50 T 26-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PAM18_RS01750 24f8f9cb71c7f66b322995104075a469 383 Gene3D G3DSA:3.20.20.190 54 380 6.8E-89 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 2.7E-80 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 SUPERFAMILY SSF69255 371 459 1.18E-32 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 SUPERFAMILY SSF69279 10 185 2.89E-54 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 511 5.9E-117 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 PANTHER PTHR32305 1 641 0.0 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 7.7E-199 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 PANTHER PTHR32305:SF11 1 641 0.0 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 Gene3D G3DSA:3.55.50.10 95 190 6.7E-32 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 SUPERFAMILY SSF69349 449 632 3.53E-40 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 SUPERFAMILY SSF69279 192 371 8.16E-44 T 26-04-2016 PAM18_RS26610 1bb765e6132a8ea5b5fa0917b62ce2b2 790 Gene3D G3DSA:2.40.50.230 378 459 1.9E-38 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 933 9.2E-9 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.30.300.30 1873 1994 8.6E-26 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.30.300.30 847 960 4.7E-36 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.980 444 599 9.3E-47 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.980 1477 1626 8.9E-40 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SMART SM00823 Phosphopantetheine attachment site 1987 2059 3.6E-6 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SMART SM00823 Phosphopantetheine attachment site 956 1024 0.0014 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF56801 413 969 4.45E-157 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF52777 1227 1458 2.56E-35 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1502 1894 9.2E-109 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 473 876 4.8E-135 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF52777 9 167 6.11E-25 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF52777 186 436 2.45E-36 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 ProSitePatterns PS00012 Phosphopantetheine attachment site. 980 995 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF47336 1982 2056 1.7E-17 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF56801 1472 2001 6.02E-130 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:2.30.38.10 765 842 2.7E-29 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:2.30.38.10 1790 1864 2.4E-26 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00668 Condensation domain 1051 1337 6.5E-37 T 26-04-2016 IPR001242 Condensation domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00668 Condensation domain 7 290 2.1E-41 T 26-04-2016 IPR001242 Condensation domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF53474 2056 2341 3.65E-62 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF47336 949 1020 2.49E-17 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 PANTHER PTHR24095:SF209 6 1963 0.0 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00550 Phosphopantetheine attachment site 1992 2055 2.0E-12 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00550 Phosphopantetheine attachment site 958 1020 2.9E-12 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 SUPERFAMILY SSF52777 1045 1238 1.09E-25 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00501 AMP-binding enzyme 1481 1877 1.1E-79 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00501 AMP-binding enzyme 451 852 2.7E-101 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.30.559.10 1088 1215 9.5E-5 T 26-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1617 1628 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 591 602 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.980 600 764 3.7E-47 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.980 1627 1789 4.5E-29 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 PANTHER PTHR24095 6 1963 0.0 T 26-04-2016 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Pfam PF00975 Thioesterase domain 2078 2337 2.4E-32 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:1.10.1200.10 1995 2059 1.2E-21 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:1.10.1200.10 961 1022 1.2E-24 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.1820 2062 2182 1.1E-51 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08415 f98fa73d34b047b8df818aafae2934a7 2352 Gene3D G3DSA:3.40.50.1820 2263 2345 1.1E-51 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02640 7addca5974c608da2ecf629a4b428f4b 85 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 6 74 4.5E-12 T 26-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 PANTHER PTHR10366 4 323 2.6E-192 T 26-04-2016 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.40.50.720 3 183 2.3E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 PANTHER PTHR10366:SF32 4 323 2.6E-192 T 26-04-2016 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 322 53.111 T 26-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.90.25.10 187 322 3.5E-48 T 26-04-2016 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 SUPERFAMILY SSF51735 3 319 9.68E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 319 2.3E-127 T 26-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 PAM18_RS28495 85d010fb479e34b496b58f4759483e47 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 3.7E-122 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Pfam PF03454 MoeA C-terminal region (domain IV) 336 402 1.6E-14 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 172 2.0E-37 T 26-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Gene3D G3DSA:3.90.105.10 147 166 1.0E-21 T 26-04-2016 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Gene3D G3DSA:3.90.105.10 32 54 1.0E-21 T 26-04-2016 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 PANTHER PTHR10192 6 406 2.8E-217 T 26-04-2016 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 SUPERFAMILY SSF53218 182 327 3.01E-38 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Pfam PF00994 Probable molybdopterin binding domain 197 320 6.0E-22 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 SUPERFAMILY SSF63867 332 403 9.94E-13 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Gene3D G3DSA:2.40.340.10 335 403 9.4E-9 T 26-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 SMART SM00852 185 322 1.2E-35 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Gene3D G3DSA:3.40.980.10 167 332 1.5E-57 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 PANTHER PTHR10192:SF17 6 406 2.8E-217 T 26-04-2016 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 SUPERFAMILY SSF63882 11 181 2.09E-51 T 26-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05210 c812fb999c46f91a86c0a5e89b905147 407 Gene3D G3DSA:2.170.190.11 55 146 6.9E-27 T 26-04-2016 PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF04830 Possible hemagglutinin (DUF637) 3021 3100 9.2E-14 T 26-04-2016 IPR006915 Domain of unknown function DUF637, haemagglutinin putative PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF04830 Possible hemagglutinin (DUF637) 2966 3016 3.8E-9 T 26-04-2016 IPR006915 Domain of unknown function DUF637, haemagglutinin putative PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF13332 Haemagluttinin repeat 2696 2837 1.7E-10 T 26-04-2016 IPR025157 Haemagluttinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF13332 Haemagluttinin repeat 2626 2693 1.3E-5 T 26-04-2016 IPR025157 Haemagluttinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 407 460 2.2E-6 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 2158 2185 10.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1343 1432 1.6E-6 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 980 1054 0.003 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1278 1338 2.6E-4 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1557 1618 50.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 471 540 0.018 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 2575 2614 64.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1970 2002 130.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 635 697 0.0045 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 216 292 2.6E-8 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 823 885 3.3E-7 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1133 1201 5.4E-7 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1476 1550 46.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 2485 2531 21.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 296 371 17.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 1669 1736 0.93 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 715 769 0.002 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05594 Haemagluttinin repeat 2041 2095 86.0 T 26-04-2016 IPR008619 Filamentous haemagglutinin repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 PANTHER PTHR32093 1 169 6.4E-81 T 26-04-2016 PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 SUPERFAMILY SSF51126 45 294 3.14E-64 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Gene3D G3DSA:2.160.20.10 39 324 6.0E-95 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1382 1421 2.3E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1905 1942 1.5E-6 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1340 1380 3.4E-9 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1530 1571 8.3E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1465 1505 6.8E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 311 350 0.38 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2511 2547 0.04 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1003 1042 1.1E-9 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1149 1185 2.3E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 895 935 1.9E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1663 1700 0.001 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1045 1084 0.0061 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 812 852 8.2E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1108 1148 3.7E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1088 1126 0.0027 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1190 1220 0.0014 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1413 1443 0.062 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 462 501 0.018 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 853 892 1.1E-5 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 419 460 4.6E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 688 727 3.1E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1423 1464 0.47 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1219 1252 3.3E-5 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1486 1529 0.022 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 585 625 1.0E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1581 1613 0.45 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2044 2083 0.0065 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1867 1903 6.2E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 379 418 2.0E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 874 913 3.0E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 505 540 2.2E-6 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 958 1001 0.021 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1447 1484 9.7E-7 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 729 769 7.4E-8 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 606 644 3.2E-5 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 937 969 1.6 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2492 2531 6.2E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 770 809 4.4E-5 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1516 1550 1.6E-6 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 542 582 2.1E-4 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1066 1106 0.078 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1254 1294 0.0014 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1296 1337 0.021 T 26-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 163 1.1E-17 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 Pfam PF05860 haemagglutination activity domain 33 166 1.7E-33 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS00210 728dc92857bf0dd0ec1e7f17cbecd4b6 3299 SMART SM00912 47 168 1.9E-46 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 PANTHER PTHR32332:SF12 1 80 1.1E-137 T 26-04-2016 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 PANTHER PTHR32332:SF12 110 350 1.1E-137 T 26-04-2016 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 Gene3D G3DSA:3.20.20.70 2 340 3.2E-67 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 Pfam PF03060 Nitronate monooxygenase 5 348 5.6E-81 T 26-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 PANTHER PTHR32332 1 80 1.1E-137 T 26-04-2016 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 PANTHER PTHR32332 110 350 1.1E-137 T 26-04-2016 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 SUPERFAMILY SSF51412 103 349 1.19E-61 T 26-04-2016 PAM18_RS03760 eabf0aa66a10812d05cc295c7e09ce84 351 SUPERFAMILY SSF51412 4 73 1.19E-61 T 26-04-2016 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PANTHER PTHR30035 1 233 1.5E-102 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 Pfam PF04333 MlaA lipoprotein 34 223 3.1E-77 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PANTHER PTHR30035:SF3 1 233 1.5E-102 T 26-04-2016 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PRINTS PR01805 VacJ lipoprotein signature 139 156 4.5E-28 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PRINTS PR01805 VacJ lipoprotein signature 52 68 4.5E-28 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PRINTS PR01805 VacJ lipoprotein signature 35 48 4.5E-28 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS11100 32ca18514bf0a173d37dfe0379732cf8 234 PRINTS PR01805 VacJ lipoprotein signature 103 120 4.5E-28 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 119 7.2E-17 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 PIRSF PIRSF039090 1 130 1.2E-35 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 Pfam PF02561 Flagellar protein FliS 6 119 2.2E-28 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 SUPERFAMILY SSF101116 13 121 2.35E-28 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 PANTHER PTHR34773 1 132 6.9E-26 T 26-04-2016 PAM18_RS20120 6f5666942ffb9cf1e19ff13d7252d8d4 132 Gene3D G3DSA:1.20.120.340 3 125 1.6E-31 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Gene3D G3DSA:3.40.50.261 147 306 1.7E-22 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Pfam PF13549 ATP-grasp domain 493 706 2.4E-61 T 26-04-2016 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Gene3D G3DSA:3.30.470.20 496 536 4.4E-5 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 SUPERFAMILY SSF52210 148 309 6.8E-37 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 SMART SM00881 21 116 7.4E-36 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 PANTHER PTHR33303 17 705 3.7E-262 T 26-04-2016 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Pfam PF13380 CoA binding domain 25 148 1.6E-23 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 SUPERFAMILY SSF52210 315 469 6.28E-21 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 SUPERFAMILY SSF51735 19 145 1.2E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Gene3D G3DSA:3.40.50.720 17 146 5.5E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 PANTHER PTHR33303:SF3 17 705 3.7E-262 T 26-04-2016 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 SUPERFAMILY SSF56059 494 710 4.24E-39 T 26-04-2016 PAM18_RS20570 23c2afdffde548947070ff880ae872dc 715 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 171 308 7.8E-41 T 26-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PAM18_RS03255 c6f57d677f56e4e5a70fb09b7a3c23fc 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 2.3E-56 T 26-04-2016 IPR005265 Uncharacterised protein family UPF0093 PAM18_RS03255 c6f57d677f56e4e5a70fb09b7a3c23fc 141 PANTHER PTHR40255 1 141 5.9E-67 T 26-04-2016 PAM18_RS03255 c6f57d677f56e4e5a70fb09b7a3c23fc 141 PIRSF PIRSF004638 1 141 9.1E-62 T 26-04-2016 IPR005265 Uncharacterised protein family UPF0093 PAM18_RS03255 c6f57d677f56e4e5a70fb09b7a3c23fc 141 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 141 2.4E-49 T 26-04-2016 IPR014351 Conserved hypothetical protein CHP00701 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 PIRSF PIRSF001227 17 842 7.5E-165 T 26-04-2016 IPR014395 Penicillin acylase GO:0016811 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 PANTHER PTHR34218:SF2 1 847 2.1E-300 T 26-04-2016 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:3.60.20.10 265 340 1.6E-90 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:3.60.20.10 429 677 1.6E-90 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:1.10.439.10 40 209 1.7E-50 T 26-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:2.30.120.10 341 401 1.3E-19 T 26-04-2016 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 SUPERFAMILY SSF56235 52 840 3.34E-207 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 Pfam PF01804 Penicillin amidase 56 833 1.3E-197 T 26-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PAM18_RS20490 766decd330e43a801085d84fc009ad29 847 PANTHER PTHR34218 1 847 2.1E-300 T 26-04-2016 PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF102712 121 197 1.83E-5 T 26-04-2016 PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF47781 18 90 1.04E-8 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 26-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 Pfam PF04002 RadC-like JAB domain 104 222 3.8E-43 T 26-04-2016 IPR025657 RadC-like JAB domain PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.4E-74 T 26-04-2016 IPR001405 RadC protein PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 PANTHER PTHR30471 1 224 1.2E-142 T 26-04-2016 PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 Gene3D G3DSA:3.40.140.10 101 224 3.4E-49 T 26-04-2016 PAM18_RS27790 24581ec7a8d0038bb40341c79ac17967 224 PANTHER PTHR30471:SF5 1 224 1.2E-142 T 26-04-2016 PAM18_RS25605 d8c23bf70c5b3958bbc6a9bd706075af 223 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 223 29.094 T 26-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PAM18_RS25605 d8c23bf70c5b3958bbc6a9bd706075af 223 PANTHER PTHR33620 1 223 2.5E-41 T 26-04-2016 PAM18_RS25605 d8c23bf70c5b3958bbc6a9bd706075af 223 PIRSF PIRSF009467 1 223 2.8E-57 T 26-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PAM18_RS25605 d8c23bf70c5b3958bbc6a9bd706075af 223 Pfam PF01730 UreF 35 181 4.3E-35 T 26-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 PAM18_RS25615 b5830a17a0c8d811ac84a3d590682fec 189 PIRSF PIRSF016919 1 167 5.1E-57 T 26-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PAM18_RS25615 b5830a17a0c8d811ac84a3d590682fec 189 Pfam PF04955 HupE / UreJ protein 10 153 1.2E-55 T 26-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 8.5E-42 T 26-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 28.049 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 SUPERFAMILY SSF51230 2 122 8.11E-36 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 Gene3D G3DSA:2.40.50.100 3 122 2.1E-41 T 26-04-2016 PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 PANTHER PTHR11715 2 121 8.9E-54 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS13320 668246e173fcdf56fbeb855b40c642cb 127 Pfam PF01597 Glycine cleavage H-protein 4 122 3.6E-37 T 26-04-2016 IPR002930 Glycine cleavage system H-protein PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:1.10.10.10 4 84 2.7E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF46785 7 113 4.61E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 Pfam PF03466 LysR substrate binding domain 90 286 1.4E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 93 177 3.8E-26 T 26-04-2016 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 PANTHER PTHR30537 1 293 2.1E-112 T 26-04-2016 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 178 250 1.9E-13 T 26-04-2016 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF53850 92 291 5.25E-43 T 26-04-2016 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 PANTHER PTHR30537:SF26 1 293 2.1E-112 T 26-04-2016 PAM18_RS05545 f5da2a4c0998617391541157e069cfaf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 SMART SM00382 30 221 6.0E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 PIRSF PIRSF039137 1 238 2.3E-101 T 26-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 PANTHER PTHR24220:SF515 7 236 2.8E-168 T 26-04-2016 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 PANTHER PTHR24220 7 236 2.8E-168 T 26-04-2016 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 Gene3D G3DSA:3.40.50.300 3 233 4.0E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 Pfam PF00005 ABC transporter 21 165 3.9E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS25690 4fd27d286117689be0e232fdecef9595 238 SUPERFAMILY SSF52540 5 235 5.75E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 328 6.4E-133 T 26-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 24 169 1.4E-49 T 26-04-2016 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 176 297 1.3E-23 T 26-04-2016 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 PANTHER PTHR30368:SF2 7 332 6.3E-172 T 26-04-2016 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 PANTHER PTHR30368 7 332 6.3E-172 T 26-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 8.6E-41 T 26-04-2016 PAM18_RS18620 a8f3a1c2daabeec968d9599383441cca 332 SUPERFAMILY SSF53850 22 329 3.76E-83 T 26-04-2016 PAM18_RS00940 ec5fb8721261da9650a0851bcfd6260e 353 Gene3D G3DSA:3.40.190.10 130 250 5.1E-20 T 26-04-2016 PAM18_RS00940 ec5fb8721261da9650a0851bcfd6260e 353 PANTHER PTHR30024 1 308 4.3E-53 T 26-04-2016 PAM18_RS00940 ec5fb8721261da9650a0851bcfd6260e 353 Pfam PF09084 NMT1/THI5 like 68 260 1.6E-19 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS00940 ec5fb8721261da9650a0851bcfd6260e 353 SUPERFAMILY SSF53850 32 274 2.3E-39 T 26-04-2016 PAM18_RS00940 ec5fb8721261da9650a0851bcfd6260e 353 PANTHER PTHR30024:SF1 1 308 4.3E-53 T 26-04-2016 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 PIRSF PIRSF000429 1 394 5.7E-125 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 SUPERFAMILY SSF53901 271 391 1.37E-40 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 PANTHER PTHR18919 1 394 6.5E-193 T 26-04-2016 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 PANTHER PTHR18919:SF14 1 394 6.5E-193 T 26-04-2016 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Pfam PF00108 Thiolase, N-terminal domain 4 261 3.0E-67 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.1E-133 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 3 125 1.7E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 185 274 1.7E-60 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Pfam PF02803 Thiolase, C-terminal domain 271 391 6.5E-45 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 277 391 2.2E-63 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 Gene3D G3DSA:3.40.47.10 145 184 2.2E-63 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07770 4eaaf2a407b6f0f9bbafe236bf320af7 394 SUPERFAMILY SSF53901 1 265 7.84E-71 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 26-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 56.785 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 SUPERFAMILY SSF51556 128 431 2.17E-202 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 SUPERFAMILY SSF51556 480 566 2.17E-202 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 1.5E-56 T 26-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 6.5E-34 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 6.5E-34 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 6.5E-34 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 6.5E-34 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 26-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Pfam PF01979 Amidohydrolase family 124 450 3.6E-79 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 SUPERFAMILY SSF51338 2 176 4.07E-63 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 2.1E-292 T 26-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Gene3D G3DSA:3.20.20.140 487 564 3.5E-211 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Gene3D G3DSA:3.20.20.140 143 428 3.5E-211 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PANTHER PTHR22642:SF7 23 295 2.3E-260 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PANTHER PTHR22642:SF7 319 500 2.3E-260 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PANTHER PTHR22642 23 295 2.3E-260 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 PANTHER PTHR22642 319 500 2.3E-260 T 26-04-2016 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 Gene3D G3DSA:2.30.40.10 67 142 2.5E-14 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS25485 012a6332c8a3f115e60502a1f5d82d6a 566 SUPERFAMILY SSF51338 417 476 2.01E-6 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 SUPERFAMILY SSF49472 1 117 1.57E-42 T 26-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 PANTHER PTHR10395 1 117 3.5E-48 T 26-04-2016 PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 PRINTS PR00189 Transthyretin signature 3 23 1.1E-7 T 26-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 PRINTS PR00189 Transthyretin signature 95 117 1.1E-7 T 26-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 26-04-2016 IPR023418 Transthyretin, thyroxine binding site PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 Gene3D G3DSA:2.60.40.180 2 117 1.4E-37 T 26-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 26-04-2016 IPR023419 Transthyretin, conserved site PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 PANTHER PTHR10395:SF7 1 117 3.5E-48 T 26-04-2016 PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 3.1E-40 T 26-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 PAM18_RS18495 98d4708e9008f7da263f25bc1d059da5 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.4E-35 T 26-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 SUPERFAMILY SSF46785 4 86 5.3E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 PANTHER PTHR30537 1 294 1.3E-114 T 26-04-2016 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 SUPERFAMILY SSF53850 85 289 7.6E-34 T 26-04-2016 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 PANTHER PTHR30537:SF26 1 294 1.3E-114 T 26-04-2016 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 Gene3D G3DSA:3.40.190.10 95 178 1.8E-29 T 26-04-2016 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 Gene3D G3DSA:3.40.190.10 179 258 6.8E-17 T 26-04-2016 PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 Gene3D G3DSA:1.10.10.10 5 86 5.3E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 Pfam PF03466 LysR substrate binding domain 92 289 2.0E-34 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS04225 fdaf3bd3049fd3950fd8ed36189dd56b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Gene3D G3DSA:1.10.8.60 367 415 1.8E-18 T 26-04-2016 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 PANTHER PTHR32071:SF35 164 516 7.2E-229 T 26-04-2016 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Gene3D G3DSA:3.40.50.300 192 366 8.9E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 SUPERFAMILY SSF46689 464 516 3.32E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 SMART SM00065 22 170 1.5E-9 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Pfam PF02954 Bacterial regulatory protein, Fis family 479 509 4.7E-5 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 SUPERFAMILY SSF52540 193 429 1.25E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Gene3D G3DSA:3.30.450.40 7 175 2.2E-17 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 PANTHER PTHR32071 164 516 7.2E-229 T 26-04-2016 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 SMART SM00382 214 357 1.6E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Gene3D G3DSA:1.10.10.60 416 516 1.3E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Pfam PF01590 GAF domain 25 159 1.5E-9 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 SUPERFAMILY SSF55781 24 172 1.22E-16 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS11860 41b6cf49c5753e622dd31982edfa5cf6 517 Pfam PF00158 Sigma-54 interaction domain 194 360 4.5E-69 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 PANTHER PTHR11699 1 519 5.2E-191 T 26-04-2016 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 Pfam PF00171 Aldehyde dehydrogenase family 35 456 1.2E-46 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 PANTHER PTHR11699:SF10 1 519 5.2E-191 T 26-04-2016 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 Gene3D G3DSA:3.40.309.10 267 454 2.9E-57 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 Gene3D G3DSA:3.40.605.10 7 265 2.8E-47 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS14475 36199d80f4aad47985adf6b151e7a255 527 SUPERFAMILY SSF53720 22 518 6.41E-101 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS00730 2240e41e21c926fe5452d54f831f62e4 179 PANTHER PTHR15364:SF1 1 171 1.2E-100 T 26-04-2016 PAM18_RS00730 2240e41e21c926fe5452d54f831f62e4 179 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 13 154 1.3E-49 T 26-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 PAM18_RS00730 2240e41e21c926fe5452d54f831f62e4 179 SUPERFAMILY SSF52309 11 170 1.53E-46 T 26-04-2016 PAM18_RS00730 2240e41e21c926fe5452d54f831f62e4 179 Gene3D G3DSA:3.40.50.1810 12 154 5.7E-24 T 26-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 PAM18_RS00730 2240e41e21c926fe5452d54f831f62e4 179 PANTHER PTHR15364 1 171 1.2E-100 T 26-04-2016 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.2E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.6E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 SUPERFAMILY SSF46785 5 116 5.99E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 Gene3D G3DSA:1.10.10.10 11 93 5.0E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 SUPERFAMILY SSF53850 96 301 3.58E-36 T 26-04-2016 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 Gene3D G3DSA:3.40.190.10 96 181 2.5E-17 T 26-04-2016 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 Pfam PF03466 LysR substrate binding domain 94 300 7.0E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 Gene3D G3DSA:3.40.190.10 182 267 4.4E-15 T 26-04-2016 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 PANTHER PTHR30126:SF34 7 313 1.2E-207 T 26-04-2016 PAM18_RS01155 b3423078fe83366fff10137868cd0ecd 313 PANTHER PTHR30126 7 313 1.2E-207 T 26-04-2016 PAM18_RS27870 0c066e2e70e9547a7a28a2c737101a64 287 PANTHER PTHR30636 1 287 1.7E-103 T 26-04-2016 PAM18_RS27870 0c066e2e70e9547a7a28a2c737101a64 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.8E-90 T 26-04-2016 IPR005229 Conserved hypothetical protein CHP00255 PAM18_RS27870 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.3E-40 T 26-04-2016 IPR013527 YicC-like, N-terminal PAM18_RS27870 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 26-04-2016 IPR013551 Domain of unknown function DUF1732 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 SUPERFAMILY SSF48452 15 185 2.65E-59 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 Pfam PF06041 Bacterial protein of unknown function (DUF924) 21 186 1.4E-49 T 26-04-2016 IPR010323 Protein of unknown function DUF924 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 Gene3D G3DSA:1.25.40.10 90 188 9.1E-35 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 Gene3D G3DSA:1.20.58.320 17 89 1.0E-26 T 26-04-2016 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 PANTHER PTHR23004 1 189 1.1E-83 T 26-04-2016 PAM18_RS10695 bc73021f80a1558ce592bf3059b84b07 189 PANTHER PTHR23004:SF7 1 189 1.1E-83 T 26-04-2016 PAM18_RS08850 9c92e8fbe408f71485fcfc290bf9bea5 211 PANTHER PTHR11079:SF86 5 210 1.0E-66 T 26-04-2016 PAM18_RS08850 9c92e8fbe408f71485fcfc290bf9bea5 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS08850 9c92e8fbe408f71485fcfc290bf9bea5 211 SUPERFAMILY SSF55120 5 210 8.64E-62 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS08850 9c92e8fbe408f71485fcfc290bf9bea5 211 Pfam PF00849 RNA pseudouridylate synthase 15 161 3.3E-30 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS08850 9c92e8fbe408f71485fcfc290bf9bea5 211 PANTHER PTHR11079 5 210 1.0E-66 T 26-04-2016 PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 Gene3D G3DSA:1.20.1050.10 85 191 2.4E-18 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 193 2.3E-13 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 19 76 2.1E-6 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 SUPERFAMILY SSF47616 85 202 6.26E-20 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 Gene3D G3DSA:3.40.30.10 6 78 1.9E-13 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 PANTHER PTHR11260 1 196 1.5E-53 T 26-04-2016 PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 PANTHER PTHR11260:SF178 1 196 1.5E-53 T 26-04-2016 PAM18_RS18755 882b79a8b707c80cb005f7993e255d5b 228 SUPERFAMILY SSF52833 4 77 7.78E-12 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 SUPERFAMILY SSF103473 7 385 2.35E-54 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 Gene3D G3DSA:1.20.1250.20 15 189 9.7E-25 T 26-04-2016 PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 Gene3D G3DSA:1.20.1250.20 207 383 4.4E-12 T 26-04-2016 PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 PANTHER PTHR23501 1 392 3.0E-254 T 26-04-2016 PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 PANTHER PTHR23501:SF89 1 392 3.0E-254 T 26-04-2016 PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 Pfam PF07690 Major Facilitator Superfamily 18 349 1.6E-32 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS04205 d7fcc085020ef0fde59e14318c486dd8 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.902 T 26-04-2016 IPR023495 Sugar efflux transporter, putative PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 SUPERFAMILY SSF54197 2 132 2.04E-35 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 Pfam PF01230 HIT domain 8 98 2.5E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 Gene3D G3DSA:3.30.428.10 4 133 1.4E-36 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 PANTHER PTHR23089 21 130 1.1E-21 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 PANTHER PTHR23089:SF13 21 130 1.1E-21 T 26-04-2016 PAM18_RS20820 591f0a4861e5197edadb8ba56167d08d 142 PIRSF PIRSF000714 1 136 4.5E-49 T 26-04-2016 IPR026026 Histidine triad hydrolase, Hint-type PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 Pfam PF00743 Flavin-binding monooxygenase-like 14 216 1.6E-12 T 26-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 Gene3D G3DSA:3.50.50.60 5 223 3.1E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 Gene3D G3DSA:3.50.50.60 326 491 2.2E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 PANTHER PTHR23023 11 487 6.4E-273 T 26-04-2016 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 SUPERFAMILY SSF51905 11 237 1.65E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 SUPERFAMILY SSF51905 283 486 2.87E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17985 d03021d059a49093437c3cf4aafd3c57 514 PANTHER PTHR23023:SF132 11 487 6.4E-273 T 26-04-2016 PAM18_RS00195 fff95ed1e230e58aefce34036f943fa9 71 PANTHER PTHR39324 1 71 1.1E-26 T 26-04-2016 PAM18_RS00195 fff95ed1e230e58aefce34036f943fa9 71 SUPERFAMILY SSF89807 6 69 1.44E-27 T 26-04-2016 IPR009923 Dodecin PAM18_RS00195 fff95ed1e230e58aefce34036f943fa9 71 PANTHER PTHR39324:SF1 1 71 1.1E-26 T 26-04-2016 PAM18_RS00195 fff95ed1e230e58aefce34036f943fa9 71 Gene3D G3DSA:3.30.1660.10 4 69 4.3E-35 T 26-04-2016 IPR025543 Dodecin-like PAM18_RS00195 fff95ed1e230e58aefce34036f943fa9 71 Pfam PF07311 Dodecin 6 68 3.4E-31 T 26-04-2016 IPR009923 Dodecin PAM18_RS25140 1edafbaafa40d48d54aa95619256ef0b 240 Gene3D G3DSA:3.60.110.10 3 234 2.7E-45 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS25140 1edafbaafa40d48d54aa95619256ef0b 240 SUPERFAMILY SSF56317 4 234 1.31E-46 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS25140 1edafbaafa40d48d54aa95619256ef0b 240 Pfam PF00795 Carbon-nitrogen hydrolase 4 231 9.8E-24 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS25140 1edafbaafa40d48d54aa95619256ef0b 240 PANTHER PTHR23088 4 234 5.8E-39 T 26-04-2016 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 SUPERFAMILY SSF102114 6 210 8.76E-32 T 26-04-2016 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 Pfam PF04055 Radical SAM superfamily 27 185 2.1E-18 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 SMART SM00729 22 237 7.9E-30 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 PANTHER PTHR11918:SF47 1 210 1.6E-77 T 26-04-2016 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 Gene3D G3DSA:3.20.20.70 23 203 2.2E-24 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS10295 436906dcdf3ef6daffc9e37f99b56ac3 298 PANTHER PTHR11918 1 210 1.6E-77 T 26-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 PANTHER PTHR22935 1 392 3.1E-81 T 26-04-2016 PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 PANTHER PTHR22935:SF64 1 392 3.1E-81 T 26-04-2016 PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 ProSitePatterns PS00336 Beta-lactamase class-C active site. 86 93 - T 26-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 SUPERFAMILY SSF56601 32 387 1.68E-95 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 Pfam PF00144 Beta-lactamase 38 385 2.0E-80 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS04220 667e21bdb7e59cc5749aab1eb1ef6495 397 Gene3D G3DSA:3.40.710.10 33 385 1.4E-82 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 4.0E-27 T 26-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 1.9E-95 T 26-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 PIRSF PIRSF000456 1 258 1.7E-99 T 26-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 PANTHER PTHR23416 1 250 2.9E-129 T 26-04-2016 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 4 32 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:1.20.1180.10 193 258 9.5E-26 T 26-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:2.160.10.10 3 189 1.0E-49 T 26-04-2016 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 32 65 6.2E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 1.5E-8 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 PANTHER PTHR23416:SF8 1 250 2.9E-129 T 26-04-2016 PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 SUPERFAMILY SSF51161 3 258 3.83E-77 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS06590 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 45.218 T 26-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 PAM18_RS09865 1af68ce814bfb8fd0b477a66eef9e44b 109 PANTHER PTHR35893:SF3 2 109 1.5E-47 T 26-04-2016 PAM18_RS09865 1af68ce814bfb8fd0b477a66eef9e44b 109 PANTHER PTHR35893 2 109 1.5E-47 T 26-04-2016 PAM18_RS09865 1af68ce814bfb8fd0b477a66eef9e44b 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 109 8.5E-35 T 26-04-2016 IPR010279 Protein of unknown function DUF883, ElaB PAM18_RS28315 3e34409668980654bbdd982c129a361f 211 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 52 204 5.6E-61 T 26-04-2016 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28315 3e34409668980654bbdd982c129a361f 211 SUPERFAMILY SSF103025 84 209 7.65E-21 T 26-04-2016 PAM18_RS28315 3e34409668980654bbdd982c129a361f 211 Pfam PF04268 Sarcosine oxidase, gamma subunit family 53 204 2.9E-58 T 26-04-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 PAM18_RS28315 3e34409668980654bbdd982c129a361f 211 Gene3D G3DSA:3.30.1360.120 129 210 7.4E-6 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS18105 81321b00a574ad4e8d0315e0b0cfd1eb 168 PANTHER PTHR33204:SF10 1 160 3.9E-84 T 26-04-2016 PAM18_RS18105 81321b00a574ad4e8d0315e0b0cfd1eb 168 Gene3D G3DSA:1.10.10.10 1 111 2.5E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18105 81321b00a574ad4e8d0315e0b0cfd1eb 168 SUPERFAMILY SSF46785 6 143 2.89E-34 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18105 81321b00a574ad4e8d0315e0b0cfd1eb 168 Pfam PF01638 HxlR-like helix-turn-helix 20 105 8.8E-19 T 26-04-2016 IPR002577 Helix-turn-helix, HxlR type PAM18_RS18105 81321b00a574ad4e8d0315e0b0cfd1eb 168 PANTHER PTHR33204 1 160 3.9E-84 T 26-04-2016 PAM18_RS10345 786502bd48e70b6121d5c9e84311649a 233 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 1 226 9.6E-96 T 26-04-2016 IPR012666 Cobalt transporter subunit CbtA, putative PAM18_RS10345 786502bd48e70b6121d5c9e84311649a 233 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 2 224 3.3E-67 T 26-04-2016 IPR012666 Cobalt transporter subunit CbtA, putative PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 SUPERFAMILY SSF141571 36 209 1.81E-39 T 26-04-2016 PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 PANTHER PTHR14136:SF0 36 195 8.1E-34 T 26-04-2016 PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 Pfam PF00805 Pentapeptide repeats (8 copies) 167 206 4.1E-10 T 26-04-2016 IPR001646 Pentapeptide repeat PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 Pfam PF00805 Pentapeptide repeats (8 copies) 127 166 3.3E-8 T 26-04-2016 IPR001646 Pentapeptide repeat PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 Pfam PF00805 Pentapeptide repeats (8 copies) 72 107 3.5E-11 T 26-04-2016 IPR001646 Pentapeptide repeat PAM18_RS15705 29272cb09dc1b824f1299ba5d4cc3220 215 PANTHER PTHR14136 36 195 8.1E-34 T 26-04-2016 PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 Gene3D G3DSA:3.40.50.1820 304 494 2.8E-25 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 Gene3D G3DSA:3.40.50.1820 198 243 2.8E-25 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 Gene3D G3DSA:3.40.50.1820 96 147 2.8E-25 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 PANTHER PTHR10272:SF0 4 541 2.9E-63 T 26-04-2016 PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 PANTHER PTHR10272 4 541 2.9E-63 T 26-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 SUPERFAMILY SSF53474 327 495 2.21E-11 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 SUPERFAMILY SSF53474 100 134 2.21E-11 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 SUPERFAMILY SSF53474 198 241 2.21E-11 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16065 7ede9cc7c6d0bc684be875246c243799 546 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 104 240 6.5E-6 T 26-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 Gene3D G3DSA:3.40.50.1000 210 266 3.1E-28 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 Gene3D G3DSA:3.40.50.1000 30 103 3.1E-28 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 PANTHER PTHR19288:SF3 21 293 6.0E-83 T 26-04-2016 PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 Pfam PF13242 HAD-hyrolase-like 210 269 1.2E-7 T 26-04-2016 PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 Pfam PF13344 Haloacid dehalogenase-like hydrolase 34 120 2.1E-9 T 26-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 24 259 2.9E-109 T 26-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 PANTHER PTHR19288 21 293 6.0E-83 T 26-04-2016 PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 34 259 3.4E-56 T 26-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA PAM18_RS05360 25828f1e48d55e54a0805eeb885b4e29 299 SUPERFAMILY SSF56784 30 268 2.07E-35 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 PANTHER PTHR11831:SF4 1 206 2.1E-95 T 26-04-2016 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.582 T 26-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:1.10.1050.10 1 98 2.8E-43 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 SUPERFAMILY SSF55174 3 206 4.97E-72 T 26-04-2016 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 SMART SM01390 3 95 3.3E-52 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 PANTHER PTHR11831 1 206 2.1E-95 T 26-04-2016 IPR022801 Ribosomal protein S4/S9 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF01479 S4 domain 97 143 1.1E-20 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 SMART SM00363 96 160 1.7E-19 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 26-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:3.10.290.10 99 198 5.6E-34 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 4.2E-31 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 PAM18_RS03545 71795eb63bdb23b8ba831912c0915bac 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-80 T 26-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 PANTHER PTHR10314 4 316 3.2E-90 T 26-04-2016 PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 304 5.8E-63 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 SUPERFAMILY SSF53686 8 312 1.83E-73 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 56 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 Gene3D G3DSA:3.40.50.1100 73 315 5.5E-49 T 26-04-2016 PAM18_RS21395 ea42e9ed152c85159977cd4462573883 320 PANTHER PTHR10314:SF17 4 316 3.2E-90 T 26-04-2016 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 SUPERFAMILY SSF46894 163 236 2.48E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.4E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 Pfam PF03472 Autoinducer binding domain 17 158 1.4E-36 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 PANTHER PTHR26402 41 233 2.0E-12 T 26-04-2016 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 230 8.9E-16 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 PANTHER PTHR26402:SF432 41 233 2.0E-12 T 26-04-2016 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 SUPERFAMILY SSF75516 4 166 1.44E-41 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 Gene3D G3DSA:3.30.450.80 1 178 3.1E-39 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 Gene3D G3DSA:1.10.10.10 179 235 1.4E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16110 ec99ef81dc7a9d4be5fb76c15ff52681 237 SMART SM00421 173 230 4.5E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 Gene3D G3DSA:3.40.718.10 4 327 3.9E-135 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 4.6E-109 T 26-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 PANTHER PTHR30004:SF5 1 328 7.3E-211 T 26-04-2016 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 SUPERFAMILY SSF53659 3 326 8.98E-113 T 26-04-2016 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 PANTHER PTHR30004 1 328 7.3E-211 T 26-04-2016 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 8.9E-128 T 26-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PAM18_RS03005 7fca4b384a646296a0b5752a00ade22a 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 324 36.418 T 26-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PAM18_RS28805 3bc53c85585f1b6a37280f8f166eedf4 127 Pfam PF11743 Protein of unknown function (DUF3301) 2 92 1.1E-33 T 26-04-2016 IPR021732 Protein of unknown function DUF3301 PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.7E-47 T 26-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.215 T 26-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 SUPERFAMILY SSF51283 2 149 1.57E-52 T 26-04-2016 IPR029054 dUTPase-like PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 PANTHER PTHR11241 6 149 2.4E-52 T 26-04-2016 PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 Gene3D G3DSA:2.70.40.10 6 149 2.2E-52 T 26-04-2016 IPR029054 dUTPase-like PAM18_RS27800 75e3538f3cb74b472ef9a4728f71a47a 151 Pfam PF00692 dUTPase 17 149 5.1E-40 T 26-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 432 5.2E-114 T 26-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.9E-21 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00700 Bacterial flagellin C-terminal helical region 352 432 4.4E-7 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244:SF5 345 432 6.3E-85 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244:SF5 237 323 6.3E-85 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244:SF5 1 185 6.3E-85 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Gene3D G3DSA:1.20.1330.10 59 168 3.7E-26 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Gene3D G3DSA:1.20.1330.10 337 384 3.7E-26 T 26-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 SUPERFAMILY SSF64518 1 433 5.49E-82 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244 345 432 6.3E-85 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244 237 323 6.3E-85 T 26-04-2016 PAM18_RS20210 7b5b0bad8c7ebd6e785ba670aafaacc7 433 PANTHER PTHR30244 1 185 6.3E-85 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 4.6E-131 T 26-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 Gene3D G3DSA:3.40.50.720 1 170 2.1E-23 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 SUPERFAMILY SSF51735 1 326 8.68E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 Gene3D G3DSA:3.90.25.10 171 308 5.2E-27 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 PANTHER PTHR10366:SF469 281 328 1.8E-113 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 PANTHER PTHR10366:SF469 2 264 1.8E-113 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 56.913 T 26-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 PANTHER PTHR10366 281 328 1.8E-113 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 PANTHER PTHR10366 2 264 1.8E-113 T 26-04-2016 PAM18_RS08365 d4b0844812de67f38c8b6ff6edc16bbb 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 2.7E-41 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS28545 fe68e248814f4b5e7ea0fb78912db34a 106 Pfam PF09498 Protein of unknown function (DUF2388) 36 105 3.5E-31 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS28545 fe68e248814f4b5e7ea0fb78912db34a 106 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 105 6.0E-40 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS28800 0ada659900d64d8e00c79be49ef066c5 262 PANTHER PTHR30627:SF6 16 236 6.0E-25 T 26-04-2016 PAM18_RS28800 0ada659900d64d8e00c79be49ef066c5 262 PANTHER PTHR30627 16 236 6.0E-25 T 26-04-2016 PAM18_RS28800 0ada659900d64d8e00c79be49ef066c5 262 SUPERFAMILY SSF56601 34 251 3.19E-36 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS28800 0ada659900d64d8e00c79be49ef066c5 262 Pfam PF00905 Penicillin binding protein transpeptidase domain 55 249 7.6E-25 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS28800 0ada659900d64d8e00c79be49ef066c5 262 Gene3D G3DSA:3.40.710.10 26 262 1.3E-78 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.1160.10 20 280 2.2E-60 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF53633 3 283 6.84E-63 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00583 Acetyltransferase (GNAT) family 331 403 6.8E-8 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00696 Amino acid kinase family 25 259 9.8E-19 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 PIRSF PIRSF000423 1 432 9.5E-193 T 26-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 4 432 5.8E-213 T 26-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 432 222.198 T 26-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.630.30 287 428 2.2E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF55729 253 409 1.2E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 PANTHER PTHR30602:SF3 1 432 5.0E-271 T 26-04-2016 PAM18_RS27210 a9324c57adf80ac2d843be9dbee9a77f 432 PANTHER PTHR30602 1 432 5.0E-271 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 SUPERFAMILY SSF143724 156 361 1.0E-61 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 PIRSF PIRSF015589 23 734 7.1E-288 T 26-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Hamap MF_00347 Polyphosphate kinase [ppk]. 50 729 34.739 T 26-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Pfam PF13090 Polyphosphate kinase C-terminal domain 379 725 2.1E-153 T 26-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Gene3D G3DSA:3.30.1840.10 155 348 2.4E-68 T 26-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Pfam PF02503 Polyphosphate kinase middle domain 169 369 1.2E-63 T 26-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Gene3D G3DSA:3.30.870.10 362 547 5.0E-73 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 PANTHER PTHR30218 47 736 0.0 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 SUPERFAMILY SSF56024 362 544 1.54E-56 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 SUPERFAMILY SSF140356 50 154 9.16E-37 T 26-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Gene3D G3DSA:3.30.870.10 548 728 2.0E-76 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 Pfam PF13089 Polyphosphate kinase N-terminal domain 53 158 1.6E-35 T 26-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 PANTHER PTHR30218:SF0 47 736 0.0 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 SUPERFAMILY SSF56024 548 727 1.32E-73 T 26-04-2016 PAM18_RS27400 bb385f7bf4fb31692817e5ed40c489ee 736 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 53 726 4.3E-288 T 26-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 PANTHER PTHR34039:SF1 3 124 5.9E-43 T 26-04-2016 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 Gene3D G3DSA:3.40.1350.10 14 124 8.1E-38 T 26-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 7 118 23.829 T 26-04-2016 IPR003509 Uncharacterised protein family UPF0102 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 PANTHER PTHR34039 3 124 5.9E-43 T 26-04-2016 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 Pfam PF02021 Uncharacterised protein family UPF0102 14 105 6.7E-26 T 26-04-2016 IPR003509 Uncharacterised protein family UPF0102 PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 SUPERFAMILY SSF52980 8 118 1.52E-21 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS23070 8df1ef27b6ec39594877ea700d39e20e 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 124 3.5E-31 T 26-04-2016 IPR003509 Uncharacterised protein family UPF0102 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 360 382 9.6E-10 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 9.6E-10 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 9.6E-10 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 9.6E-10 T 26-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 612 1.0E-229 T 26-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 Pfam PF00361 Proton-conducting membrane transporter 136 427 1.1E-90 T 26-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 1.2E-21 T 26-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PANTHER PTHR22773:SF50 1 570 6.8E-237 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PANTHER PTHR22773 1 570 6.8E-237 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.8E-55 T 26-04-2016 PAM18_RS11960 db15784dd1c3faf4d1c4062fe631a98f 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 1.8E-55 T 26-04-2016 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Pfam PF02785 Biotin carboxylase C-terminal domain 342 449 1.5E-37 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Gene3D G3DSA:2.40.50.100 582 650 2.1E-26 T 26-04-2016 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 PANTHER PTHR18866:SF102 1 654 0.0 T 26-04-2016 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Gene3D G3DSA:3.40.50.20 8 134 1.1E-48 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 2.7E-41 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 SUPERFAMILY SSF51246 337 454 4.55E-40 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 SUPERFAMILY SSF52440 4 119 4.46E-46 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Pfam PF00364 Biotin-requiring enzyme 586 650 1.8E-18 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 2.8E-78 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Gene3D G3DSA:3.30.470.20 211 453 3.3E-102 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 SUPERFAMILY SSF51230 573 650 9.29E-22 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 SUPERFAMILY SSF56059 89 350 3.01E-68 T 26-04-2016 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 Gene3D G3DSA:3.30.1490.20 135 208 1.3E-30 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 PANTHER PTHR18866 1 654 0.0 T 26-04-2016 PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 SMART SM00878 342 449 1.8E-56 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal PAM18_RS15550 4a31f5817d05c7d4610f4877b2a161b3 655 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 607 624 - T 26-04-2016 IPR001882 Biotin-binding site PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 PANTHER PTHR11662 11 415 6.4E-142 T 26-04-2016 PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 SUPERFAMILY SSF103473 7 405 1.57E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 Pfam PF07690 Major Facilitator Superfamily 22 369 1.3E-48 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 Gene3D G3DSA:1.20.1250.20 9 196 4.9E-33 T 26-04-2016 PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 PANTHER PTHR11662:SF286 11 415 6.4E-142 T 26-04-2016 PAM18_RS21580 04a3cec90680fbfa2e93ece3e339c500 415 Gene3D G3DSA:1.20.1250.20 231 402 1.8E-14 T 26-04-2016 PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 Gene3D G3DSA:3.90.1150.10 264 395 6.9E-45 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 PANTHER PTHR11751 18 403 9.9E-272 T 26-04-2016 PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 PANTHER PTHR11751:SF302 18 403 9.9E-272 T 26-04-2016 PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 Pfam PF00155 Aminotransferase class I and II 37 386 4.5E-59 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 SUPERFAMILY SSF53383 10 394 1.75E-106 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS24690 43b108de01b6626ce39691a2be9280fb 404 Gene3D G3DSA:3.40.640.10 50 263 2.6E-61 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Pfam PF16193 AAA C-terminal domain 184 260 9.9E-21 T 26-04-2016 IPR032423 AAA ATPase, C-terminal domain PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 PANTHER PTHR13779 11 440 5.2E-197 T 26-04-2016 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 1.1E-67 T 26-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 PANTHER PTHR13779:SF7 11 440 5.2E-197 T 26-04-2016 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Gene3D G3DSA:1.10.8.60 152 235 4.9E-9 T 26-04-2016 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 SMART SM00382 46 163 4.2E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Gene3D G3DSA:3.40.50.300 10 151 5.4E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Gene3D G3DSA:1.20.272.10 242 340 6.6E-43 T 26-04-2016 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Gene3D G3DSA:1.10.3710.10 341 439 1.6E-35 T 26-04-2016 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 SUPERFAMILY SSF48019 245 427 5.95E-75 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 SUPERFAMILY SSF52540 8 234 2.14E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12130 54e9ed3406079ce6dfdf519113afcd33 441 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 142 1.3E-15 T 26-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 Pfam PF07702 UTRA domain 106 243 1.8E-36 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.0E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.0E-8 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF64288 73 248 2.2E-45 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 SMART SM00345 26 85 1.1E-19 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 PANTHER PTHR11751:SF364 19 109 2.9E-51 T 26-04-2016 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 PANTHER PTHR11751 19 109 2.9E-51 T 26-04-2016 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:1.10.10.10 19 92 1.4E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:3.40.1410.10 103 239 6.3E-54 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF46785 20 89 2.04E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 1.6E-108 T 26-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 SMART SM00866 106 243 2.8E-36 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS26685 a170810abb56561f1c869bcc18108523 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 9.2E-20 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 Gene3D G3DSA:3.40.1130.10 36 197 1.7E-15 T 26-04-2016 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 SMART SM00563 34 157 5.6E-18 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 Pfam PF01553 Acyltransferase 33 154 9.4E-16 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 SUPERFAMILY SSF69593 17 205 1.7E-32 T 26-04-2016 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 PANTHER PTHR10434:SF21 6 200 3.6E-47 T 26-04-2016 PAM18_RS12895 bdb0114b4cf81d070b39cfb93b348e62 209 PANTHER PTHR10434 6 200 3.6E-47 T 26-04-2016 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 SUPERFAMILY SSF69593 15 240 2.09E-36 T 26-04-2016 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 SMART SM00563 76 190 3.8E-31 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 PANTHER PTHR10434 1 242 1.4E-54 T 26-04-2016 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 Gene3D G3DSA:3.40.1130.10 66 248 8.6E-20 T 26-04-2016 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 PANTHER PTHR10434:SF11 1 242 1.4E-54 T 26-04-2016 PAM18_RS00025 4a927c409d65092df4b33a5538c6fd10 257 Pfam PF01553 Acyltransferase 63 187 8.6E-23 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS10510 b7431f9205479dd732227f43e3bcb247 343 Gene3D G3DSA:1.10.3470.10 9 342 6.0E-99 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS10510 b7431f9205479dd732227f43e3bcb247 343 SUPERFAMILY SSF81345 4 342 9.15E-77 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS10510 b7431f9205479dd732227f43e3bcb247 343 PANTHER PTHR30472 4 343 1.4E-155 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS10510 b7431f9205479dd732227f43e3bcb247 343 Pfam PF01032 FecCD transport family 22 341 4.1E-86 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS10510 b7431f9205479dd732227f43e3bcb247 343 PANTHER PTHR30472:SF32 4 343 1.4E-155 T 26-04-2016 PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SUPERFAMILY SSF51126 37 407 1.08E-56 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 288 329 1.6E-5 T 26-04-2016 IPR022441 Parallel beta-helix repeat-2 PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 Pfam PF05048 Periplasmic copper-binding protein (NosD) 144 383 1.1E-68 T 26-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 41 420 1.2E-140 T 26-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 233 255 340.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 211 232 3900.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 189 210 3300.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 137 166 1000.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 115 136 31.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 292 313 400.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 85 113 31.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 167 188 1.5 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00710 315 353 4000.0 T 26-04-2016 IPR006626 Parallel beta-helix repeat PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 Gene3D G3DSA:2.160.20.10 307 351 6.3E-18 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 Gene3D G3DSA:2.160.20.10 47 275 6.3E-18 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00722 38 187 2.5E-24 T 26-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PAM18_RS08085 53c1ff97bed035f526ebd4508aacf59c 428 SMART SM00722 193 367 6.7E-30 T 26-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain PAM18_RS03250 b757aaa09f11dc38795b3305faefaa29 322 SUPERFAMILY SSF51412 6 306 8.97E-59 T 26-04-2016 PAM18_RS03250 b757aaa09f11dc38795b3305faefaa29 322 PANTHER PTHR32332 2 322 6.8E-214 T 26-04-2016 PAM18_RS03250 b757aaa09f11dc38795b3305faefaa29 322 PANTHER PTHR32332:SF21 2 322 6.8E-214 T 26-04-2016 PAM18_RS03250 b757aaa09f11dc38795b3305faefaa29 322 Pfam PF03060 Nitronate monooxygenase 89 303 1.1E-27 T 26-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 PAM18_RS03250 b757aaa09f11dc38795b3305faefaa29 322 Gene3D G3DSA:3.20.20.70 7 299 3.9E-47 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS23850 3d4b6f937e6b2d962f925828b83181a5 162 PANTHER PTHR38596 1 162 6.3E-101 T 26-04-2016 PAM18_RS23850 3d4b6f937e6b2d962f925828b83181a5 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 160 4.5E-74 T 26-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria PAM18_RS23850 3d4b6f937e6b2d962f925828b83181a5 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 124 9.0E-35 T 26-04-2016 IPR005134 Uncharacterised protein family UPF0114 PAM18_RS23850 3d4b6f937e6b2d962f925828b83181a5 162 PANTHER PTHR38596:SF1 1 162 6.3E-101 T 26-04-2016 PAM18_RS23850 3d4b6f937e6b2d962f925828b83181a5 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 92.22 T 26-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 Gene3D G3DSA:1.20.1550.10 4 163 2.4E-44 T 26-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 PANTHER PTHR36570:SF2 1 169 4.7E-79 T 26-04-2016 PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 5.1E-34 T 26-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 168 18.453 T 26-04-2016 IPR022920 Disulphide bond formation protein DsbB PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 PANTHER PTHR36570 1 169 4.7E-79 T 26-04-2016 PAM18_RS02725 dc49b5c9f0ab138154b8018916e9036a 169 SUPERFAMILY SSF158442 13 159 4.05E-33 T 26-04-2016 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 Gene3D G3DSA:3.60.110.10 220 468 2.6E-28 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 PANTHER PTHR38686 1 508 8.5E-104 T 26-04-2016 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 SUPERFAMILY SSF56317 221 484 5.23E-47 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 2.9E-97 T 26-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 Pfam PF00795 Carbon-nitrogen hydrolase 231 467 8.1E-29 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS04855 235c0a6570ebf32f0bea0cb98cd04416 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 489 22.912 T 26-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 SUPERFAMILY SSF47413 46 94 2.48E-5 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 SMART SM00530 26 98 6.9E-5 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 Gene3D G3DSA:1.10.260.40 15 95 5.4E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 PANTHER PTHR35010:SF3 8 287 8.6E-157 T 26-04-2016 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 PANTHER PTHR35010 8 287 8.6E-157 T 26-04-2016 PAM18_RS19270 44ae34dfa4bcff20e05a81bdb9938202 287 Pfam PF13560 Helix-turn-helix domain 22 101 1.1E-14 T 26-04-2016 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PIRSF PIRSF000149 4 345 2.2E-131 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.40.50.720 5 168 2.6E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF51735 7 175 4.38E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 160 6.0E-48 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 2.4E-24 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 154 172 2.4E-24 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 181 197 2.4E-24 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 238 255 2.4E-24 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 2.4E-24 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PANTHER PTHR10836 5 348 1.8E-228 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF55347 160 324 3.27E-56 T 26-04-2016 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.30.360.10 169 325 2.6E-57 T 26-04-2016 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 PANTHER PTHR10836:SF47 5 348 1.8E-228 T 26-04-2016 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 166 322 3.4E-50 T 26-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 SMART SM00846 6 160 3.7E-68 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 PAM18_RS02790 d9a860de488f409a211a52e6e8bdda8b 353 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 7 335 9.9E-187 T 26-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 277 2.5E-106 T 26-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 Gene3D G3DSA:3.30.1400.10 146 283 2.7E-57 T 26-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 PANTHER PTHR38685:SF1 1 289 4.4E-99 T 26-04-2016 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 277 7.0E-70 T 26-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 279 25.715 T 26-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 SUPERFAMILY SSF64383 147 283 2.75E-47 T 26-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 PANTHER PTHR38685 1 289 4.4E-99 T 26-04-2016 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 3.5E-49 T 26-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PAM18_RS18035 fff8a43449bceb4e21918d0450591efe 289 SMART SM00771 147 277 7.5E-71 T 26-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 PAM18_RS15820 9a74df716d422e5ad94e4cc7b5291327 277 Pfam PF02673 Bacitracin resistance protein BacA 9 258 3.7E-80 T 26-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PAM18_RS15820 9a74df716d422e5ad94e4cc7b5291327 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.748 T 26-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PAM18_RS15820 9a74df716d422e5ad94e4cc7b5291327 277 PANTHER PTHR30622:SF3 2 272 6.0E-145 T 26-04-2016 PAM18_RS15820 9a74df716d422e5ad94e4cc7b5291327 277 PANTHER PTHR30622 2 272 6.0E-145 T 26-04-2016 PAM18_RS15820 9a74df716d422e5ad94e4cc7b5291327 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 2.3E-80 T 26-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PAM18_RS17635 1856682f9d2ac7abf0cb2d1bb31b4455 158 Pfam PF12975 Domain of unknown function (DUF3859) 28 157 1.1E-44 T 26-04-2016 IPR024331 Domain of unknown function DUF3859 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF52343 102 256 1.44E-42 T 26-04-2016 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PANTHER PTHR19370:SF98 5 257 1.8E-131 T 26-04-2016 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 6.9E-8 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF63380 3 99 2.33E-27 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 2.4E-9 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.4E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.4E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.4E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.4E-6 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:2.40.30.10 4 97 4.4E-33 T 26-04-2016 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:3.40.50.80 98 257 6.2E-48 T 26-04-2016 PAM18_RS08065 57e65bbd2cd27181b4c81fc4bfd275af 258 PANTHER PTHR19370 5 257 1.8E-131 T 26-04-2016 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 118 210 1.1E-10 T 26-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 SUPERFAMILY SSF55347 110 262 1.14E-28 T 26-04-2016 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 PANTHER PTHR22604 1 326 5.5E-91 T 26-04-2016 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 Gene3D G3DSA:3.30.360.10 124 328 9.5E-41 T 26-04-2016 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 Gene3D G3DSA:3.40.50.720 1 123 1.2E-31 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 SUPERFAMILY SSF51735 1 137 3.75E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 15 106 4.6E-15 T 26-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PAM18_RS01175 bfc8c416df1ba4e39d433a946d323705 333 PANTHER PTHR22604:SF123 1 326 5.5E-91 T 26-04-2016 PAM18_RS27980 d8bd366841f8f47c8af80087383c8a10 178 Pfam PF04345 Chorismate lyase 1 175 3.1E-78 T 26-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PAM18_RS27980 d8bd366841f8f47c8af80087383c8a10 178 Gene3D G3DSA:3.40.1410.10 4 170 7.1E-52 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS27980 d8bd366841f8f47c8af80087383c8a10 178 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 5 172 26.872 T 26-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 PAM18_RS27980 d8bd366841f8f47c8af80087383c8a10 178 SUPERFAMILY SSF64288 8 170 2.59E-48 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS27980 d8bd366841f8f47c8af80087383c8a10 178 PANTHER PTHR38683 1 178 1.2E-68 T 26-04-2016 PAM18_RS11530 c4930216aea210f4c7b0ddbc15ee1fa7 102 Gene3D G3DSA:1.10.10.60 9 92 4.3E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11530 c4930216aea210f4c7b0ddbc15ee1fa7 102 PANTHER PTHR33215:SF4 1 102 1.1E-60 T 26-04-2016 PAM18_RS11530 c4930216aea210f4c7b0ddbc15ee1fa7 102 PANTHER PTHR33215 1 102 1.1E-60 T 26-04-2016 PAM18_RS11530 c4930216aea210f4c7b0ddbc15ee1fa7 102 SUPERFAMILY SSF46689 5 95 6.09E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11530 c4930216aea210f4c7b0ddbc15ee1fa7 102 Pfam PF01527 Transposase 3 76 7.2E-21 T 26-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 Gene3D G3DSA:3.40.190.10 179 260 1.6E-18 T 26-04-2016 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 PANTHER PTHR30537:SF8 1 295 3.2E-124 T 26-04-2016 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 Gene3D G3DSA:1.10.10.10 7 90 3.1E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 SUPERFAMILY SSF46785 8 113 1.02E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 Gene3D G3DSA:3.40.190.10 94 178 1.6E-30 T 26-04-2016 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 PANTHER PTHR30537 1 295 3.2E-124 T 26-04-2016 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.2E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 SUPERFAMILY SSF53850 92 294 4.52E-34 T 26-04-2016 PAM18_RS19670 716495ec26df2053933a91d52e99dc4d 296 Pfam PF03466 LysR substrate binding domain 92 292 1.3E-33 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 PANTHER PTHR30329 125 204 6.3E-196 T 26-04-2016 PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 PANTHER PTHR30329 247 446 6.3E-196 T 26-04-2016 PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 Pfam PF09850 Type VI secretion system protein DotU 67 269 8.8E-69 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 66 275 1.2E-72 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 Pfam PF00691 OmpA family 339 437 1.6E-15 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 SUPERFAMILY SSF103088 328 443 6.15E-29 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 307 443 1.7E-53 T 26-04-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 PANTHER PTHR30329:SF7 125 204 6.3E-196 T 26-04-2016 PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 PANTHER PTHR30329:SF7 247 446 6.3E-196 T 26-04-2016 PAM18_RS00400 a3b5f1cbb03653e428a3b50f5ec37674 449 Gene3D G3DSA:3.30.1330.60 317 443 3.6E-31 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS20480 4b3061eee71e21ae094c15c35a193c08 66 Gene3D G3DSA:3.10.450.50 25 65 2.2E-11 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS20480 4b3061eee71e21ae094c15c35a193c08 66 SUPERFAMILY SSF103642 46 65 2.29E-8 T 26-04-2016 PAM18_RS20480 4b3061eee71e21ae094c15c35a193c08 66 Pfam PF02810 SEC-C motif 48 65 2.4E-11 T 26-04-2016 IPR004027 SEC-C motif PAM18_RS20480 4b3061eee71e21ae094c15c35a193c08 66 PANTHER PTHR33747 1 66 1.6E-18 T 26-04-2016 PAM18_RS05085 5774ab82d0853c9a307b73dae6f3f0cb 290 Gene3D G3DSA:1.10.540.10 6 74 8.1E-10 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS05085 5774ab82d0853c9a307b73dae6f3f0cb 290 SUPERFAMILY SSF56645 4 181 5.36E-14 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 Pfam PF00743 Flavin-binding monooxygenase-like 82 217 9.2E-9 T 26-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 PANTHER PTHR23023:SF30 3 467 2.9E-250 T 26-04-2016 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 Gene3D G3DSA:3.50.50.60 324 460 7.9E-8 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 Gene3D G3DSA:3.50.50.60 2 220 3.9E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 SUPERFAMILY SSF51905 4 386 3.09E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 PANTHER PTHR23023 3 467 2.9E-250 T 26-04-2016 PAM18_RS19550 00aecdc43a498a3abe6c6a1f74b43aba 499 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 3.9E-6 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:1.10.287.130 128 188 8.5E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.450.20 6 109 5.6E-20 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.565.10 196 355 2.0E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55785 6 104 1.54E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00091 5 73 9.8E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PANTHER PTHR24423 6 271 1.1E-165 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PANTHER PTHR24423 287 356 1.1E-165 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00989 PAS fold 8 104 5.3E-6 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 355 6.4E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00387 235 355 2.7E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PANTHER PTHR24423:SF488 6 271 1.1E-165 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PANTHER PTHR24423:SF488 287 356 1.1E-165 T 26-04-2016 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00388 131 196 3.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 1.71E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.71E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.71E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55874 198 353 9.56E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 188 1.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS26780 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF47384 125 193 5.3E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS03890 e37ac202c33b19e04a51cae00e50e661 93 Pfam PF13616 PPIC-type PPIASE domain 8 91 4.1E-21 T 26-04-2016 PAM18_RS03890 e37ac202c33b19e04a51cae00e50e661 93 Gene3D G3DSA:3.10.50.40 3 93 1.8E-33 T 26-04-2016 PAM18_RS03890 e37ac202c33b19e04a51cae00e50e661 93 SUPERFAMILY SSF54534 5 92 1.05E-27 T 26-04-2016 PAM18_RS03890 e37ac202c33b19e04a51cae00e50e661 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 26-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PAM18_RS03890 e37ac202c33b19e04a51cae00e50e661 93 PANTHER PTHR10657 3 93 8.8E-39 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.20.200.10 133 396 9.5E-84 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.40.30 402 457 6.3E-21 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Pfam PF00206 Lyase 12 336 1.5E-88 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 3.4E-5 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 3.4E-5 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 3.4E-5 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.7E-27 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.7E-27 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.7E-27 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.7E-27 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PANTHER PTHR11444 3 455 0.0 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 PANTHER PTHR11444:SF22 3 455 0.0 T 26-04-2016 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 78.574 T 26-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.275.10 3 132 8.5E-50 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 SUPERFAMILY SSF48557 3 454 9.42E-132 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS23300 f7f9519411539de56ac61298c59fa69b 458 Pfam PF10415 Fumarase C C-terminus 402 454 5.3E-20 T 26-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS24230 ee3ccff8782c86da046a3c187c08ebac 185 PANTHER PTHR22573 7 180 1.1E-56 T 26-04-2016 PAM18_RS24230 ee3ccff8782c86da046a3c187c08ebac 185 SUPERFAMILY SSF53271 15 183 2.49E-43 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24230 ee3ccff8782c86da046a3c187c08ebac 185 Gene3D G3DSA:3.40.50.2020 10 183 4.6E-53 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS24230 ee3ccff8782c86da046a3c187c08ebac 185 PANTHER PTHR22573:SF56 7 180 1.1E-56 T 26-04-2016 PAM18_RS24230 ee3ccff8782c86da046a3c187c08ebac 185 Pfam PF00156 Phosphoribosyl transferase domain 18 145 2.1E-24 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Gene3D G3DSA:1.10.10.10 271 351 3.5E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 272 351 4.1E-29 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Gene3D G3DSA:3.40.10.10 11 83 2.3E-29 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 272 350 4.6E-33 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 SUPERFAMILY SSF57884 9 87 5.89E-31 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 PANTHER PTHR10815 160 350 2.4E-74 T 26-04-2016 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Pfam PF12833 Helix-turn-helix domain 110 186 2.6E-15 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 SMART SM00342 103 184 1.5E-6 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 PIRSF PIRSF000409 1 357 1.0E-147 T 26-04-2016 IPR016221 Bifunctional regulatory protein Ada PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 321 327 - T 26-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Gene3D G3DSA:1.10.10.60 140 186 1.0E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 SUPERFAMILY SSF53155 191 274 8.04E-10 T 26-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 SUPERFAMILY SSF46767 271 351 3.53E-29 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 PANTHER PTHR10815:SF5 160 350 2.4E-74 T 26-04-2016 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Pfam PF02805 Metal binding domain of Ada 16 78 3.2E-27 T 26-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 PAM18_RS07150 9108e2eb74426ec4301ea839df7fc396 357 Gene3D G3DSA:1.10.10.60 111 139 1.2E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Gene3D G3DSA:2.40.30.110 278 357 2.6E-27 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 SUPERFAMILY SSF103025 4 276 3.45E-86 T 26-04-2016 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 PANTHER PTHR13847 5 341 1.4E-61 T 26-04-2016 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 261 349 2.4E-19 T 26-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 2.4E-124 T 26-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 PANTHER PTHR13847:SF5 5 341 1.4E-61 T 26-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 SUPERFAMILY SSF101790 269 357 2.13E-25 T 26-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 2.8E-82 T 26-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 43.503 T 26-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 PIRSF PIRSF006487 1 358 1.8E-79 T 26-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Gene3D G3DSA:3.30.70.1400 54 136 7.0E-31 T 26-04-2016 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Gene3D G3DSA:3.30.1360.120 143 230 2.3E-48 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS27265 34101d871cb76f2fbab899fd622ccd44 360 Gene3D G3DSA:3.30.1360.120 4 53 2.3E-48 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.5E-8 T 26-04-2016 IPR024973 ESPR domain PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 87 160 1.1E-24 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 SUPERFAMILY SSF51126 45 339 3.04E-49 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF05860 haemagglutination activity domain 53 164 3.6E-28 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 PANTHER PTHR12338 890 1398 5.2E-292 T 26-04-2016 PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 PANTHER PTHR12338 1 874 5.2E-292 T 26-04-2016 PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF07581 The GLUG motif 1103 1129 0.0024 T 26-04-2016 IPR011493 GLUG PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF07581 The GLUG motif 1046 1069 0.0018 T 26-04-2016 IPR011493 GLUG PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF07581 The GLUG motif 1017 1042 0.0022 T 26-04-2016 IPR011493 GLUG PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Pfam PF07581 The GLUG motif 1191 1216 1.7E-5 T 26-04-2016 IPR011493 GLUG PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 Gene3D G3DSA:2.160.20.10 85 334 4.2E-22 T 26-04-2016 IPR012334 Pectin lyase fold PAM18_RS23665 fdf4da24c8a51a93e0decb5dbe4578eb 1399 SMART SM00912 51 165 4.0E-45 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 SMART SM00670 13 147 4.8E-10 T 26-04-2016 IPR002716 PIN domain PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF88723 12 74 5.3E-17 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF88723 110 161 5.3E-17 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 PANTHER PTHR30473:SF2 206 458 1.5E-208 T 26-04-2016 PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 PANTHER PTHR30473:SF2 12 187 1.5E-208 T 26-04-2016 PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF13638 PIN domain 15 160 3.5E-39 T 26-04-2016 IPR002716 PIN domain PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF52540 208 442 1.64E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF02562 PhoH-like protein 254 450 1.9E-45 T 26-04-2016 IPR003714 PhoH-like protein GO:0005524 PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.1010 14 73 2.3E-13 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.1010 110 163 2.3E-13 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 PANTHER PTHR30473 206 458 1.5E-208 T 26-04-2016 PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 PANTHER PTHR30473 12 187 1.5E-208 T 26-04-2016 PAM18_RS05185 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.300 251 460 1.9E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 Gene3D G3DSA:3.40.309.10 268 445 6.7E-49 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 PANTHER PTHR11699:SF144 14 497 1.1E-281 T 26-04-2016 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 Gene3D G3DSA:3.40.605.10 20 267 2.2E-74 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 PANTHER PTHR11699 14 497 1.1E-281 T 26-04-2016 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 SUPERFAMILY SSF53720 18 484 2.23E-130 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS20515 f61f95a40b3f860f35de4637d96c4e06 497 Pfam PF00171 Aldehyde dehydrogenase family 19 479 4.4E-127 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 Pfam PF00005 ABC transporter 37 178 3.7E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 PANTHER PTHR24220:SF422 18 234 2.0E-153 T 26-04-2016 PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 SMART SM00382 45 226 4.5E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 Gene3D G3DSA:3.40.50.300 15 231 5.4E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 SUPERFAMILY SSF52540 17 230 2.52E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS14045 5ec3aeb9a8b275f4444edcef94ee5b33 282 PANTHER PTHR24220 18 234 2.0E-153 T 26-04-2016 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 7 239 1.5E-66 T 26-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 221 4.2E-47 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 PIRSF PIRSF036427 5 246 1.5E-69 T 26-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 SUPERFAMILY SSF53790 2 240 1.83E-49 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 PANTHER PTHR21091:SF127 1 220 5.9E-88 T 26-04-2016 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 Gene3D G3DSA:3.30.950.10 140 220 8.4E-4 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 PANTHER PTHR21091 1 220 5.9E-88 T 26-04-2016 PAM18_RS10560 0f7c971057528f90f2a4bb54ab3136e9 250 Gene3D G3DSA:3.40.1010.10 6 138 5.4E-33 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 Pfam PF01212 Beta-eliminating lyase 7 297 2.2E-79 T 26-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 Gene3D G3DSA:3.90.1150.10 257 341 1.2E-15 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 Gene3D G3DSA:3.40.640.10 7 250 3.2E-66 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 PANTHER PTHR10289 1 344 1.2E-170 T 26-04-2016 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 SUPERFAMILY SSF53383 7 341 1.9E-102 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 PANTHER PTHR10289:SF8 1 344 1.2E-170 T 26-04-2016 PAM18_RS28285 ec3d34b04bad802d78b32af7efbcf8c1 346 PIRSF PIRSF038940 5 346 4.9E-138 T 26-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 Gene3D G3DSA:3.30.300.30 525 628 1.4E-15 T 26-04-2016 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 2 651 1.0E-275 T 26-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 SUPERFAMILY SSF56801 19 643 3.92E-127 T 26-04-2016 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 PANTHER PTHR24095:SF46 1 648 0.0 T 26-04-2016 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 PANTHER PTHR24095 1 648 0.0 T 26-04-2016 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 Pfam PF00501 AMP-binding enzyme 95 525 8.9E-42 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 Gene3D G3DSA:3.40.50.980 90 274 5.0E-27 T 26-04-2016 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 1.7E-11 T 26-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PAM18_RS15625 42ccc86a12d9ed3cf322e0a4a59e49b5 651 Gene3D G3DSA:3.40.50.980 275 409 5.4E-14 T 26-04-2016 PAM18_RS17500 a896cda34541845d8ccf6c7dcd634f99 564 PANTHER PTHR30607 2 564 0.0 T 26-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PAM18_RS17500 a896cda34541845d8ccf6c7dcd634f99 564 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 7.0E-245 T 26-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PAM18_RS17500 a896cda34541845d8ccf6c7dcd634f99 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 562 6.9E-230 T 26-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PAM18_RS17500 a896cda34541845d8ccf6c7dcd634f99 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 35.466 T 26-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PAM18_RS17500 a896cda34541845d8ccf6c7dcd634f99 564 PIRSF PIRSF001294 1 564 1.8E-243 T 26-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 PAM18_RS05995 367df82fe6933921e0dad04abc7439fe 105 PANTHER PTHR13799:SF18 2 104 5.1E-63 T 26-04-2016 PAM18_RS05995 367df82fe6933921e0dad04abc7439fe 105 SUPERFAMILY SSF102705 2 101 5.1E-23 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS05995 367df82fe6933921e0dad04abc7439fe 105 Gene3D G3DSA:3.30.70.830 1 103 7.5E-44 T 26-04-2016 PAM18_RS05995 367df82fe6933921e0dad04abc7439fe 105 PANTHER PTHR13799 2 104 5.1E-63 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 PANTHER PTHR13707 115 275 1.1E-102 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 PANTHER PTHR13707:SF27 115 275 1.1E-102 T 26-04-2016 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 230 493 1.1E-22 T 26-04-2016 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 554 1.1E-295 T 26-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 Gene3D G3DSA:3.40.1080.10 42 234 3.8E-10 T 26-04-2016 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 554 0.0 T 26-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 PAM18_RS01025 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 42 282 1.19E-35 T 26-04-2016 PAM18_RS28340 36bbc81fd5b5a203ede101292a319d64 81 Pfam PF04226 Transglycosylase associated protein 33 80 3.0E-12 T 26-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 PAM18_RS28340 36bbc81fd5b5a203ede101292a319d64 81 PANTHER PTHR33884 1 81 5.0E-30 T 26-04-2016 PAM18_RS28340 36bbc81fd5b5a203ede101292a319d64 81 PANTHER PTHR33884:SF1 1 81 5.0E-30 T 26-04-2016 PAM18_RS27575 d0cc80400599e90b2cc02f6a2e2b9ff6 46 PIRSF PIRSF037657 1 46 1.2E-25 T 26-04-2016 IPR017254 Lipoprotein, LppL PAM18_RS27575 d0cc80400599e90b2cc02f6a2e2b9ff6 46 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 30 2.8E-9 T 26-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 Gene3D G3DSA:3.90.1150.10 253 373 9.8E-32 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 PANTHER PTHR11601 5 384 2.9E-185 T 26-04-2016 PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 PIRSF PIRSF005572 3 380 1.5E-107 T 26-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 Pfam PF00266 Aminotransferase class-V 7 367 4.4E-72 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 Gene3D G3DSA:3.40.640.10 18 252 2.8E-83 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 SUPERFAMILY SSF53383 6 376 1.03E-96 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS15295 635147d6d91930de2ca3c35f41adbb08 393 PANTHER PTHR11601:SF45 5 384 2.9E-185 T 26-04-2016 PAM18_RS22460 bd29fe643c0ae5487719e8487741e558 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 300 5.6E-64 T 26-04-2016 IPR017592 Pilus assembly, Flp-type CpaB PAM18_RS22460 bd29fe643c0ae5487719e8487741e558 303 Pfam PF08666 SAF domain 57 116 1.2E-7 T 26-04-2016 IPR013974 SAF domain PAM18_RS22460 bd29fe643c0ae5487719e8487741e558 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 120 234 5.7E-30 T 26-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain PAM18_RS22460 bd29fe643c0ae5487719e8487741e558 303 SMART SM00858 56 116 1.6E-8 T 26-04-2016 IPR013974 SAF domain PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 Pfam PF13407 Periplasmic binding protein domain 37 299 9.5E-57 T 26-04-2016 IPR025997 Periplasmic binding protein PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 PANTHER PTHR32196:SF9 9 317 4.8E-105 T 26-04-2016 PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 Gene3D G3DSA:3.40.50.2300 31 160 1.2E-39 T 26-04-2016 PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 SUPERFAMILY SSF53822 24 318 7.38E-78 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 PANTHER PTHR32196 9 317 4.8E-105 T 26-04-2016 PAM18_RS15885 175b8d19e61339568a8b09f037085b5b 319 Gene3D G3DSA:3.40.50.2300 161 305 3.3E-49 T 26-04-2016 PAM18_RS12715 6c48fcc8b4571780d112da8d59878ad9 122 SUPERFAMILY SSF49785 2 122 1.96E-64 T 26-04-2016 IPR008979 Galactose-binding domain-like PAM18_RS12715 6c48fcc8b4571780d112da8d59878ad9 122 Pfam PF07828 PA-IL-like protein 2 122 1.3E-71 T 26-04-2016 IPR012905 PA-IL-like PAM18_RS12715 6c48fcc8b4571780d112da8d59878ad9 122 Gene3D G3DSA:2.60.120.430 2 121 5.1E-59 T 26-04-2016 IPR012905 PA-IL-like PAM18_RS12715 6c48fcc8b4571780d112da8d59878ad9 122 PIRSF PIRSF020485 1 122 3.9E-74 T 26-04-2016 IPR012905 PA-IL-like PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 26-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 PANTHER PTHR38777 1 66 3.9E-26 T 26-04-2016 PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 1.3E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 1.3E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 PANTHER PTHR38777:SF1 1 66 3.9E-26 T 26-04-2016 PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 SUPERFAMILY SSF57716 35 65 3.42E-7 T 26-04-2016 PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 6.2E-17 T 26-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type PAM18_RS03100 7c3409f527b9c1f2ec8bb6c18745363b 66 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 65 1.3E-13 T 26-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 PANTHER PTHR16128 5 327 8.1E-96 T 26-04-2016 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Gene3D G3DSA:3.90.660.10 187 285 3.8E-57 T 26-04-2016 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Gene3D G3DSA:3.90.660.10 44 110 3.8E-57 T 26-04-2016 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Pfam PF01593 Flavin containing amine oxidoreductase 109 324 2.9E-10 T 26-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 68 2.0E-15 T 26-04-2016 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 SUPERFAMILY SSF51905 287 327 6.33E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 SUPERFAMILY SSF51905 2 196 6.33E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Gene3D G3DSA:3.50.50.60 111 186 1.1E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Gene3D G3DSA:3.50.50.60 287 327 1.1E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24290 8f38be811f4cd2db944a6156e450bc54 327 Gene3D G3DSA:3.50.50.60 3 41 1.1E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 Gene3D G3DSA:1.10.101.10 328 394 3.5E-11 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 Pfam PF01471 Putative peptidoglycan binding domain 339 393 5.0E-11 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 Gene3D G3DSA:1.10.530.10 206 321 6.4E-59 T 26-04-2016 PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 Gene3D G3DSA:1.10.530.10 68 125 6.4E-59 T 26-04-2016 PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 Pfam PF13406 Transglycosylase SLT domain 25 316 3.0E-103 T 26-04-2016 IPR031304 Transglycosylase SLT domain 2 PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 PANTHER PTHR30163:SF4 1 398 6.4E-277 T 26-04-2016 PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 SUPERFAMILY SSF53955 10 322 7.5E-98 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 PANTHER PTHR30163 1 398 6.4E-277 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 25 319 3.6E-109 T 26-04-2016 IPR011970 Lytic murein transglycosylase PAM18_RS19735 8cc8e105a75eebb94954f5bef44f365f 398 SUPERFAMILY SSF47090 324 393 3.14E-14 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55174 13 106 5.05E-14 T 26-04-2016 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 116 130 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55120 77 247 2.28E-42 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF01479 S4 domain 15 59 1.9E-9 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.10.290.10 14 71 4.2E-17 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 PANTHER PTHR21600 13 328 7.2E-98 T 26-04-2016 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 SMART SM00363 14 76 1.0E-7 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 PANTHER PTHR21600:SF2 13 328 7.2E-98 T 26-04-2016 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF00849 RNA pseudouridylate synthase 78 209 8.4E-15 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09190 1bbe369818e4a0b600d0da874d4754b2 386 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 82 244 9.6E-54 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.7E-14 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 Pfam PF08362 YcdC-like protein, C-terminal region 65 204 2.5E-54 T 26-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 Gene3D G3DSA:1.10.357.10 66 204 7.1E-51 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 SUPERFAMILY SSF48498 81 204 3.48E-36 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 Gene3D G3DSA:1.10.10.60 9 63 2.0E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 SUPERFAMILY SSF46689 7 73 1.59E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.4E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 PANTHER PTHR30055 1 205 3.5E-117 T 26-04-2016 PAM18_RS02205 890cb96d71ae0e8a56d370c432e62b13 206 PANTHER PTHR30055:SF42 1 205 3.5E-117 T 26-04-2016 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:3.90.700.10 246 351 9.7E-40 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF56425 240 358 8.52E-40 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 PIRSF PIRSF000171 1 580 2.2E-48 T 26-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 6.2E-41 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF46977 454 590 2.35E-49 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:1.20.58.100 450 557 1.8E-40 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 26-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 PANTHER PTHR11632:SF5 3 576 0.0 T 26-04-2016 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:3.50.50.60 4 245 3.5E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:3.50.50.60 353 426 3.5E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Gene3D G3DSA:4.10.80.40 558 590 1.1E-21 T 26-04-2016 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 PANTHER PTHR11632 3 576 0.0 T 26-04-2016 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 2.5E-258 T 26-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 0.0 T 26-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 Pfam PF00890 FAD binding domain 10 407 4.3E-118 T 26-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF51905 6 262 3.97E-74 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17750 3eace1ac6ecd017e4622c2f74d66b2ab 590 SUPERFAMILY SSF51905 361 427 3.97E-74 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 Gene3D G3DSA:1.20.1250.20 195 376 4.8E-25 T 26-04-2016 PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 Gene3D G3DSA:1.20.1250.20 8 182 1.4E-12 T 26-04-2016 PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 SUPERFAMILY SSF103473 8 374 3.4E-43 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 PANTHER PTHR23521:SF2 2 418 2.0E-207 T 26-04-2016 PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 PANTHER PTHR23521 2 418 2.0E-207 T 26-04-2016 PAM18_RS08275 480227922663675ff936f20325d9a6b4 434 Pfam PF07690 Major Facilitator Superfamily 206 377 8.7E-17 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 9.1E-135 T 26-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 26-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 49.99 T 26-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 SUPERFAMILY SSF51726 1 354 4.58E-123 T 26-04-2016 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 7.2E-142 T 26-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 PANTHER PTHR21091 1 352 1.8E-157 T 26-04-2016 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 26-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 Gene3D G3DSA:3.20.20.210 3 353 1.9E-156 T 26-04-2016 PAM18_RS26335 3e28daea28b79a60471604f1061e5020 355 PANTHER PTHR21091:SF2 1 352 1.8E-157 T 26-04-2016 PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 PANTHER PTHR38106:SF1 32 177 2.2E-69 T 26-04-2016 PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 Pfam PF04352 ProQ/FINO family 39 146 3.5E-32 T 26-04-2016 IPR016103 ProQ/FinO domain PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 SUPERFAMILY SSF48657 5 148 3.66E-37 T 26-04-2016 IPR016103 ProQ/FinO domain PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 Gene3D G3DSA:1.10.1710.10 60 139 6.2E-24 T 26-04-2016 IPR016103 ProQ/FinO domain PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 SMART SM00945 36 150 1.2E-43 T 26-04-2016 IPR016103 ProQ/FinO domain PAM18_RS12385 f41f2ee424cd4de48aba6229f1ebca2a 177 PANTHER PTHR38106 32 177 2.2E-69 T 26-04-2016 PAM18_RS14080 8cd38da5bf62f886362c35ae36c60789 180 SUPERFAMILY SSF55826 35 176 1.57E-27 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS14080 8cd38da5bf62f886362c35ae36c60789 180 Pfam PF04073 Aminoacyl-tRNA editing domain 48 166 6.0E-21 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS14080 8cd38da5bf62f886362c35ae36c60789 180 PANTHER PTHR30411 1 178 2.2E-75 T 26-04-2016 PAM18_RS14080 8cd38da5bf62f886362c35ae36c60789 180 Gene3D G3DSA:3.90.960.10 36 178 1.7E-27 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS14080 8cd38da5bf62f886362c35ae36c60789 180 PANTHER PTHR30411:SF1 1 178 2.2E-75 T 26-04-2016 PAM18_RS26120 686012b6a2c5bfbe00e1b94dd399deda 270 SUPERFAMILY SSF51430 10 267 3.4E-48 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS26120 686012b6a2c5bfbe00e1b94dd399deda 270 PANTHER PTHR11732 10 263 1.2E-50 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS26120 686012b6a2c5bfbe00e1b94dd399deda 270 Gene3D G3DSA:3.20.20.100 11 219 2.3E-40 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS26120 686012b6a2c5bfbe00e1b94dd399deda 270 PANTHER PTHR11732:SF14 10 263 1.2E-50 T 26-04-2016 PAM18_RS26120 686012b6a2c5bfbe00e1b94dd399deda 270 Pfam PF00248 Aldo/keto reductase family 22 219 4.5E-31 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS10670 a1f364f02a756a38f507ced69a42393f 55 Pfam PF11446 Protein of unknown function (DUF2897) 1 53 7.8E-26 T 26-04-2016 IPR021550 Protein of unknown function DUF2897 PAM18_RS05920 2ed12d740b6be0019f1f8d2b5d899899 298 Pfam PF13557 Putative MetA-pathway of phenol degradation 69 294 6.7E-29 T 26-04-2016 IPR025737 MetA-pathway of phenol degradation, putative PAM18_RS28995 5544f3ecc030436ec298e720a807ce21 293 Gene3D G3DSA:2.60.120.330 107 259 1.4E-18 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS28995 5544f3ecc030436ec298e720a807ce21 293 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 153 237 4.3E-9 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS28995 5544f3ecc030436ec298e720a807ce21 293 SUPERFAMILY SSF51197 75 264 6.87E-19 T 26-04-2016 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 PANTHER PTHR11926:SF16 1 400 4.6E-32 T 26-04-2016 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 PANTHER PTHR11926 1 400 4.6E-32 T 26-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 Gene3D G3DSA:3.40.50.2000 251 392 3.4E-30 T 26-04-2016 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 SUPERFAMILY SSF53756 1 415 2.07E-83 T 26-04-2016 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 135 8.6E-28 T 26-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 231 397 1.1E-4 T 26-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 PAM18_RS07650 2ac0cb789091c2c048ecd466653ecff4 426 Gene3D G3DSA:3.40.50.2000 1 250 1.5E-52 T 26-04-2016 PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 PANTHER PTHR38038 1 601 3.2E-217 T 26-04-2016 PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 PANTHER PTHR38038:SF1 1 601 3.2E-217 T 26-04-2016 PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 Gene3D G3DSA:3.40.50.2300 524 587 5.7E-57 T 26-04-2016 PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 Gene3D G3DSA:3.40.50.2300 250 359 5.7E-57 T 26-04-2016 PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 SUPERFAMILY SSF53822 447 599 2.75E-82 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 SUPERFAMILY SSF53822 251 419 2.75E-82 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 Pfam PF04348 LppC putative lipoprotein 33 594 8.3E-222 T 26-04-2016 IPR007443 Penicillin-binding protein activator LpoA PAM18_RS23065 d3f7ae8200417fa86b6a2d7addcb159b 604 Gene3D G3DSA:3.40.50.2300 361 523 8.3E-54 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 461 8.1E-19 T 26-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 SUPERFAMILY SSF117143 80 257 6.54E-76 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 SUPERFAMILY SSF117143 300 423 6.54E-76 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 PANTHER PTHR30435 340 462 2.1E-100 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 PANTHER PTHR30435 1 123 2.1E-100 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 PANTHER PTHR30435:SF1 340 462 2.1E-100 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 PANTHER PTHR30435:SF1 1 123 2.1E-100 T 26-04-2016 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 444 3.6E-97 T 26-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 Pfam PF00460 Flagella basal body rod protein 3 33 2.6E-7 T 26-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PAM18_RS20245 5c5f63b1f2dd0daf33dc1a2f195d0881 462 Pfam PF07559 Flagellar basal body protein FlaE 176 343 3.6E-27 T 26-04-2016 IPR011491 Flagellar hook protein FlgE PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 5.6E-76 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 20 229 6.1E-65 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 247 18.347 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PANTHER PTHR30371 4 267 6.2E-121 T 26-04-2016 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 ProSitePatterns PS01218 TatC family signature. 162 181 - T 26-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 9.5E-50 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 9.5E-50 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 9.5E-50 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 9.5E-50 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS26515 d6b625479a4cfadf9713c04df8ab5205 267 PANTHER PTHR30371:SF0 4 267 6.2E-121 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:1.10.10.10 1 87 3.4E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 SUPERFAMILY SSF46785 3 88 4.15E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:3.40.190.10 91 187 7.3E-9 T 26-04-2016 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 Pfam PF03466 LysR substrate binding domain 89 303 2.6E-34 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 PANTHER PTHR30126 1 317 6.0E-158 T 26-04-2016 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 Gene3D G3DSA:3.40.190.10 188 268 9.6E-8 T 26-04-2016 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 PANTHER PTHR30126:SF2 1 317 6.0E-158 T 26-04-2016 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 SUPERFAMILY SSF53850 90 307 2.71E-24 T 26-04-2016 PAM18_RS21560 b9a4e525153d0624e3ed754b29dcd643 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.4E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS06495 1ee856bf134ad7d102a8258e65999fc8 117 PIRSF PIRSF029611 1 117 7.3E-71 T 26-04-2016 IPR016928 Uncharacterised conserved protein UCP029611 PAM18_RS06495 1ee856bf134ad7d102a8258e65999fc8 117 Pfam PF03692 Putative zinc- or iron-chelating domain 20 81 4.2E-10 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PAM18_RS26380 03855a789a63222a2db217c7ac492256 198 PANTHER PTHR40278:SF1 1 195 2.4E-66 T 26-04-2016 PAM18_RS26380 03855a789a63222a2db217c7ac492256 198 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 6.2E-21 T 26-04-2016 IPR007813 Fimbrial assembly PilN PAM18_RS26380 03855a789a63222a2db217c7ac492256 198 PANTHER PTHR40278 1 195 2.4E-66 T 26-04-2016 PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 PANTHER PTHR38780 2 119 1.2E-57 T 26-04-2016 PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 118 9.1E-41 T 26-04-2016 IPR017462 Sulphur relay, TusC/DsrF PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 PANTHER PTHR38780:SF1 2 119 1.2E-57 T 26-04-2016 PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 Gene3D G3DSA:3.40.1260.10 2 118 2.0E-41 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 SUPERFAMILY SSF75169 4 118 2.35E-35 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS12165 a2326bda406bf8705c03adff3a106b82 119 Pfam PF02635 DsrE/DsrF-like family 4 118 5.6E-21 T 26-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein PAM18_RS26845 76af6a1753d0d3d5d8fd9a3ab08369eb 493 Gene3D G3DSA:2.130.10.140 436 454 2.0E-10 T 26-04-2016 PAM18_RS26845 76af6a1753d0d3d5d8fd9a3ab08369eb 493 Gene3D G3DSA:2.130.10.140 357 362 2.0E-10 T 26-04-2016 PAM18_RS26845 76af6a1753d0d3d5d8fd9a3ab08369eb 493 Gene3D G3DSA:2.130.10.140 155 258 2.0E-10 T 26-04-2016 PAM18_RS26845 76af6a1753d0d3d5d8fd9a3ab08369eb 493 SUPERFAMILY SSF110296 145 262 6.8E-10 T 26-04-2016 PAM18_RS26845 76af6a1753d0d3d5d8fd9a3ab08369eb 493 SUPERFAMILY SSF110296 425 476 6.8E-10 T 26-04-2016 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 PANTHER PTHR11922:SF45 41 204 6.5E-112 T 26-04-2016 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 PANTHER PTHR11922:SF45 224 237 6.5E-112 T 26-04-2016 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 Gene3D G3DSA:3.40.50.880 1 208 1.3E-51 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 Pfam PF00117 Glutamine amidotransferase class-I 41 181 2.2E-13 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 PANTHER PTHR11922 41 204 6.5E-112 T 26-04-2016 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 PANTHER PTHR11922 224 237 6.5E-112 T 26-04-2016 PAM18_RS02690 cd92d3cca96153096beeef67b38279cc 238 SUPERFAMILY SSF52317 1 187 5.88E-51 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PANTHER PTHR22778 1 168 1.1E-47 T 26-04-2016 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 100 114 6.78E-16 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 16 26 6.78E-16 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 43 54 6.78E-16 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 30 38 6.78E-16 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 Gene3D G3DSA:3.40.430.10 4 168 2.7E-58 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 Pfam PF00186 Dihydrofolate reductase 5 167 9.4E-55 T 26-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PANTHER PTHR22778:SF16 1 168 1.1E-47 T 26-04-2016 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 SUPERFAMILY SSF53597 4 168 2.11E-55 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 26-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS01765 21b0c7617b286ab416ea7f6d54fecf47 168 PIRSF PIRSF000194 1 168 1.6E-58 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 243 1.3E-24 T 26-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 116 245 3.45E-31 T 26-04-2016 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 Pfam PF03309 Type III pantothenate kinase 2 200 1.4E-45 T 26-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 PANTHER PTHR34265 1 244 1.0E-58 T 26-04-2016 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 1 113 5.05E-27 T 26-04-2016 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 Gene3D G3DSA:3.30.420.40 87 244 1.3E-41 T 26-04-2016 PAM18_RS03325 8424822d41dd1ed21daab6411d35028f 248 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 248 18.567 T 26-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 PAM18_RS03330 f85f04867b9f3cce8a2271c9bd331c62 234 SUPERFAMILY SSF110997 80 148 1.19E-8 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS03330 f85f04867b9f3cce8a2271c9bd331c62 234 Gene3D G3DSA:3.30.70.1070 88 148 2.9E-6 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS03330 f85f04867b9f3cce8a2271c9bd331c62 234 Gene3D G3DSA:3.30.70.1070 157 223 4.5E-6 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS03330 f85f04867b9f3cce8a2271c9bd331c62 234 SUPERFAMILY SSF110997 157 223 6.02E-6 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS03330 f85f04867b9f3cce8a2271c9bd331c62 234 Pfam PF05036 Sporulation related domain 78 148 1.6E-7 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 SUPERFAMILY SSF51905 2 313 9.36E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 Gene3D G3DSA:3.50.50.60 110 308 9.5E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 26-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PANTHER PTHR22912:SF48 1 315 2.6E-166 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 Gene3D G3DSA:3.50.50.60 5 109 2.2E-34 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.74E-77 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PANTHER PTHR22912 1 315 2.6E-166 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.5E-120 T 26-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.5E-38 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.5E-38 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.5E-38 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.5E-38 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.5E-38 T 26-04-2016 PAM18_RS12115 99083a68e91c78d221ecefe8eb6a971b 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 6.9E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 PIRSF PIRSF001394 1 506 2.6E-226 T 26-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 PANTHER PTHR30389 1 507 0.0 T 26-04-2016 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 SUPERFAMILY SSF117457 318 487 1.06E-63 T 26-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 6.8E-102 T 26-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 2.0E-66 T 26-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 Pfam PF05683 Fumarase C-terminus 289 488 8.0E-80 T 26-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 PANTHER PTHR30389:SF1 1 507 0.0 T 26-04-2016 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 5.7E-49 T 26-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PAM18_RS22605 bcdd4131abaf9e236cafd1c3cd08be3d 507 Gene3D G3DSA:3.20.130.10 305 487 7.3E-73 T 26-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 SUPERFAMILY SSF56784 13 172 1.97E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 153 1.7E-6 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 PANTHER PTHR21485 13 169 1.4E-56 T 26-04-2016 PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 PIRSF PIRSF006118 4 179 1.0E-68 T 26-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 17 169 2.1E-50 T 26-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 PAM18_RS23240 25bd437f7852dfec6c59580e37437f7c 179 Gene3D G3DSA:3.40.50.1000 12 174 2.6E-46 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 SUPERFAMILY SSF89550 168 276 3.73E-50 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 SUPERFAMILY SSF89550 1 81 3.73E-50 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 SMART SM00481 3 68 8.1E-18 T 26-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 PANTHER PTHR30007:SF4 1 287 5.3E-98 T 26-04-2016 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 Gene3D G3DSA:3.20.20.140 1 85 3.0E-41 T 26-04-2016 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 Gene3D G3DSA:3.20.20.140 160 272 3.0E-41 T 26-04-2016 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 PANTHER PTHR30007 1 287 5.3E-98 T 26-04-2016 PAM18_RS09080 bbe673360b9c0ffb10fb2f47a99104db 295 Pfam PF02811 PHP domain 4 71 8.4E-10 T 26-04-2016 IPR004013 PHP domain GO:0003824 PAM18_RS07035 7abf20a080e7986101d8950ecee5174b 335 Pfam PF07676 WD40-like Beta Propeller Repeat 91 111 0.014 T 26-04-2016 IPR011659 WD40-like Beta Propeller PAM18_RS07035 7abf20a080e7986101d8950ecee5174b 335 Gene3D G3DSA:2.130.10.10 45 259 9.9E-21 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS07035 7abf20a080e7986101d8950ecee5174b 335 SUPERFAMILY SSF69304 45 313 1.31E-17 T 26-04-2016 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 56 90 5.0E-6 T 26-04-2016 IPR011096 FTP domain PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Pfam PF03413 Peptidase propeptide and YPEB domain 123 192 2.0E-8 T 26-04-2016 IPR025711 PepSY domain PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 5.8E-26 T 26-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 5.8E-26 T 26-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 5.8E-26 T 26-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 5.8E-26 T 26-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 208 345 3.4E-34 T 26-04-2016 IPR013856 Peptidase M4 domain GO:0004222 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 SUPERFAMILY SSF55486 199 494 1.41E-88 T 26-04-2016 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Gene3D G3DSA:1.10.390.10 350 494 1.2E-49 T 26-04-2016 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 PANTHER PTHR33794 6 498 2.7E-141 T 26-04-2016 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 4.5E-37 T 26-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 PAM18_RS06190 435e42b9578de1067aa7acde72e91a4d 498 Gene3D G3DSA:3.10.170.10 200 349 8.1E-50 T 26-04-2016 IPR013856 Peptidase M4 domain GO:0004222 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 SUPERFAMILY SSF46894 132 232 1.11E-28 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 SMART SM00862 155 231 3.4E-26 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 Gene3D G3DSA:1.10.10.10 133 232 1.1E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 Pfam PF00072 Response regulator receiver domain 8 117 3.9E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 PANTHER PTHR26402 6 234 2.3E-144 T 26-04-2016 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.6E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 PANTHER PTHR26402:SF514 6 234 2.3E-144 T 26-04-2016 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 Gene3D G3DSA:3.40.50.2300 3 124 2.9E-36 T 26-04-2016 PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 SUPERFAMILY SSF52172 5 125 7.12E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS19805 614936a2721d82716cf1686b71d9f494 235 SMART SM00448 6 116 4.6E-37 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 PANTHER PTHR11079 9 319 7.5E-145 T 26-04-2016 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 SUPERFAMILY SSF55120 75 314 1.01E-80 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 PANTHER PTHR11079:SF73 9 319 7.5E-145 T 26-04-2016 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 Pfam PF01479 S4 domain 18 63 5.1E-7 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 SUPERFAMILY SSF55174 17 104 8.41E-8 T 26-04-2016 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 Gene3D G3DSA:3.10.290.10 18 63 6.8E-6 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 311 1.4E-95 T 26-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS23695 062662fe265578eecb8a19550d55caa5 320 Pfam PF00849 RNA pseudouridylate synthase 91 241 3.4E-32 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 SUPERFAMILY SSF53649 251 580 8.77E-56 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 PANTHER PTHR10342:SF235 227 566 4.0E-50 T 26-04-2016 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 Gene3D G3DSA:3.40.720.10 256 548 2.3E-38 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 Pfam PF11893 Domain of unknown function (DUF3413) 76 247 1.2E-18 T 26-04-2016 IPR024588 Inner membrane protein YejM, N-terminal PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 Pfam PF00884 Sulfatase 256 534 3.0E-29 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 PANTHER PTHR10342 227 566 4.0E-50 T 26-04-2016 PAM18_RS21005 32fcc42f52c1f30b3b9664fee4b3e3c0 642 PIRSF PIRSF004950 1 625 5.8E-207 T 26-04-2016 IPR012159 Inner membrane protein YejM PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PRINTS PR00969 Pili chaperone signature 162 177 1.7E-26 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PRINTS PR00969 Pili chaperone signature 26 35 1.7E-26 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PRINTS PR00969 Pili chaperone signature 72 93 1.7E-26 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PRINTS PR00969 Pili chaperone signature 123 138 1.7E-26 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PRINTS PR00969 Pili chaperone signature 100 117 1.7E-26 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 Gene3D G3DSA:2.60.40.360 25 141 2.3E-42 T 26-04-2016 IPR008962 PapD-like PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 141 1.4E-40 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PANTHER PTHR30251:SF0 1 237 2.6E-123 T 26-04-2016 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 229 1.1E-16 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 PANTHER PTHR30251 1 237 2.6E-123 T 26-04-2016 PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 Gene3D G3DSA:2.60.40.1070 144 231 4.4E-19 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 SUPERFAMILY SSF49584 135 232 1.83E-16 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS20700 7f60e816272a4521ee3c3429b5dd5b89 237 SUPERFAMILY SSF49354 20 141 7.33E-40 T 26-04-2016 IPR008962 PapD-like PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.30.750.44 60 110 1.2E-10 T 26-04-2016 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 376 8.5E-106 T 26-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF52096 196 370 1.06E-82 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF52096 42 123 1.06E-82 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00228 105 176 1.6E-17 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF50156 97 178 8.87E-20 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 PANTHER PTHR32060 58 394 1.9E-125 T 26-04-2016 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:2.30.42.10 111 186 8.7E-29 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF13180 PDZ domain 105 177 1.4E-11 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF03572 Peptidase family S41 203 368 1.2E-57 T 26-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00245 177 369 1.8E-75 T 26-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.90.226.10 187 371 9.8E-68 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS26835 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.90.226.10 409 430 9.8E-68 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 SUPERFAMILY SSF50182 104 179 6.87E-10 T 26-04-2016 IPR010920 LSM domain PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 Gene3D G3DSA:2.30.30.60 119 177 1.9E-10 T 26-04-2016 PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 PANTHER PTHR30221:SF8 1 180 5.4E-78 T 26-04-2016 PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 Pfam PF00924 Mechanosensitive ion channel 60 181 3.9E-14 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 SUPERFAMILY SSF82861 20 96 5.23E-6 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS27445 2de0cfd838c0982743a8bf339bbda21c 192 PANTHER PTHR30221 1 180 5.4E-78 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 SUPERFAMILY SSF111369 43 195 1.28E-22 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 228 7.7E-35 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 Pfam PF13437 HlyD family secretion protein 155 235 3.3E-10 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 Pfam PF13533 Biotin-lipoyl like 45 90 1.7E-16 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 PANTHER PTHR30367 1 290 3.9E-149 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 PANTHER PTHR30367:SF5 1 290 3.9E-149 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 Gene3D G3DSA:2.40.50.100 46 78 6.8E-18 T 26-04-2016 PAM18_RS05325 1457c7b9f93f707e65713080b12632be 302 Gene3D G3DSA:2.40.50.100 152 185 6.8E-18 T 26-04-2016 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 Gene3D G3DSA:3.40.309.10 240 426 5.3E-53 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 PANTHER PTHR11699:SF15 11 476 7.7E-196 T 26-04-2016 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 PIRSF PIRSF036492 6 476 4.1E-168 T 26-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 Gene3D G3DSA:3.40.605.10 14 239 1.3E-55 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 Pfam PF00171 Aldehyde dehydrogenase family 17 445 3.9E-88 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 SUPERFAMILY SSF53720 13 472 1.19E-119 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS01845 1498ba0a39d0d2d4c278fe1124f9f889 476 PANTHER PTHR11699 11 476 7.7E-196 T 26-04-2016 PAM18_RS23390 49daf7e36a7b7c5a7cfb36b323b38ef4 546 Pfam PF10062 Predicted secreted protein (DUF2300) 410 528 4.3E-44 T 26-04-2016 IPR018748 Domain of unknown function DUF2300, secreted PAM18_RS23390 49daf7e36a7b7c5a7cfb36b323b38ef4 546 Pfam PF10062 Predicted secreted protein (DUF2300) 82 204 8.4E-39 T 26-04-2016 IPR018748 Domain of unknown function DUF2300, secreted PAM18_RS23390 49daf7e36a7b7c5a7cfb36b323b38ef4 546 Pfam PF08486 Stage II sporulation protein 314 371 8.8E-6 T 26-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 487 1.8E-7 T 26-04-2016 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 1.8E-7 T 26-04-2016 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 SUPERFAMILY SSF51905 363 648 3.5E-30 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 PANTHER PTHR22893:SF7 2 427 6.2E-221 T 26-04-2016 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 614 1.4E-10 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Gene3D G3DSA:3.20.20.70 3 375 8.2E-106 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 338 2.8E-56 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Gene3D G3DSA:3.50.50.60 620 648 7.1E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Gene3D G3DSA:3.50.50.60 384 478 7.1E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 Gene3D G3DSA:3.50.50.60 479 618 3.3E-27 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 SUPERFAMILY SSF51395 2 368 3.67E-94 T 26-04-2016 PAM18_RS26090 77c0b81660c3d3ca8265cf155267f46c 648 PANTHER PTHR22893 2 427 6.2E-221 T 26-04-2016 PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Pfam PF00271 Helicase conserved C-terminal domain 424 524 3.9E-6 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Pfam PF08463 EcoEI R protein C-terminal 775 925 1.1E-23 T 26-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Pfam PF04851 Type III restriction enzyme, res subunit 160 312 3.2E-35 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 122 1.7E-9 T 26-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Gene3D G3DSA:3.40.50.300 157 324 1.0E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 PANTHER PTHR30195:SF3 12 924 4.2E-166 T 26-04-2016 PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 SMART SM00487 155 339 7.5E-20 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 SUPERFAMILY SSF52540 172 314 1.38E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 SUPERFAMILY SSF52540 386 528 1.38E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 Gene3D G3DSA:3.40.50.300 400 525 2.3E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11505 7ebffbae003fb490ad3639434ef6e94c 932 PANTHER PTHR30195 12 924 4.2E-166 T 26-04-2016 PAM18_RS14960 8d9009eb3bf22ea0e1db0a47d438a246 170 SUPERFAMILY SSF55729 33 137 8.11E-10 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS14960 8d9009eb3bf22ea0e1db0a47d438a246 170 Gene3D G3DSA:3.40.630.30 33 130 1.9E-7 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 PANTHER PTHR30173 12 165 9.5E-42 T 26-04-2016 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 Pfam PF08281 Sigma-70, region 4 113 165 4.0E-14 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 SUPERFAMILY SSF88659 91 165 3.36E-13 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 PANTHER PTHR30173:SF9 12 165 9.5E-42 T 26-04-2016 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 SUPERFAMILY SSF88946 11 102 3.77E-16 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 Pfam PF04542 Sigma-70 region 2 17 81 7.0E-15 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 Gene3D G3DSA:1.10.1740.10 10 82 2.6E-14 T 26-04-2016 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 162 1.0E-20 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS13240 058532d992decb69e6d57210e8c726c7 172 Gene3D G3DSA:1.10.10.10 110 162 4.8E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 SUPERFAMILY SSF54368 9 112 7.59E-7 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 253 268 - T 26-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 PANTHER PTHR20852:SF7 6 453 5.8E-138 T 26-04-2016 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 SUPERFAMILY SSF55931 119 451 2.75E-104 T 26-04-2016 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 PANTHER PTHR20852 6 453 5.8E-138 T 26-04-2016 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 Pfam PF00120 Glutamine synthetase, catalytic domain 118 450 1.3E-107 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 SMART SM01230 117 372 5.3E-98 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS17840 dba4223b12ce612f428412c5e4e6ea3c 454 Gene3D G3DSA:3.30.590.10 120 439 1.2E-92 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 Gene3D G3DSA:3.30.280.10 1 99 8.7E-50 T 26-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 SUPERFAMILY SSF54111 1 99 2.09E-46 T 26-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 PIRSF PIRSF001223 1 100 3.6E-50 T 26-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.0E-51 T 26-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 PANTHER PTHR33569:SF1 2 99 8.7E-45 T 26-04-2016 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.757 T 26-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 Pfam PF00547 Urease, gamma subunit 1 99 3.3E-47 T 26-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-37 T 26-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25470 bbd98d103d66c54e6bda4ac6e100ed7c 100 PANTHER PTHR33569 2 99 8.7E-45 T 26-04-2016 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 Gene3D G3DSA:1.10.10.10 3 84 5.3E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 Pfam PF03466 LysR substrate binding domain 88 292 2.0E-44 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 Gene3D G3DSA:3.40.190.10 173 261 3.4E-25 T 26-04-2016 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 PANTHER PTHR30537:SF11 1 294 3.4E-191 T 26-04-2016 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 SUPERFAMILY SSF53850 89 294 7.76E-48 T 26-04-2016 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 Gene3D G3DSA:3.40.190.10 86 172 6.1E-8 T 26-04-2016 PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 SUPERFAMILY SSF46785 4 85 4.14E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10700 1c7195444cd1c2082c1e4f47536adbd6 297 PANTHER PTHR30537 1 294 3.4E-191 T 26-04-2016 PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 PIRSF PIRSF006865 1 156 1.7E-65 T 26-04-2016 IPR005658 Proteinase inhibitor I11, ecotin PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 Hamap MF_00706 Ecotin [eco]. 1 156 40.185 T 26-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 PANTHER PTHR35890 1 156 1.4E-92 T 26-04-2016 PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 Pfam PF03974 Ecotin 26 146 5.9E-52 T 26-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 Gene3D G3DSA:4.10.1230.10 100 154 3.6E-28 T 26-04-2016 IPR027438 Ecotin, C-terminal PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 Gene3D G3DSA:2.60.40.550 18 99 6.8E-36 T 26-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 SUPERFAMILY SSF49772 23 154 4.97E-55 T 26-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain PAM18_RS11365 7f8214956c7d178ed4b6c2ed56c68965 156 PANTHER PTHR35890:SF4 1 156 1.4E-92 T 26-04-2016 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 SUPERFAMILY SSF75217 5 249 3.4E-98 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 114.841 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:1.10.1270.20 166 248 6.7E-35 T 26-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:3.40.1280.10 5 165 7.8E-66 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 PANTHER PTHR32125:SF1 1 233 1.8E-116 T 26-04-2016 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 PIRSF PIRSF000386 5 250 1.4E-97 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 1.7E-64 T 26-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 234 7.9E-98 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PAM18_RS06090 d0acd50c847c629539deb0382609f287 252 PANTHER PTHR32125 1 233 1.8E-116 T 26-04-2016 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 Gene3D G3DSA:1.10.10.10 4 85 2.0E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 SUPERFAMILY SSF53850 90 300 2.35E-41 T 26-04-2016 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 PANTHER PTHR30537 1 301 2.6E-190 T 26-04-2016 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 SUPERFAMILY SSF46785 4 112 5.9E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 Gene3D G3DSA:3.40.190.10 92 172 8.3E-26 T 26-04-2016 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 Pfam PF03466 LysR substrate binding domain 90 294 3.1E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 PANTHER PTHR30537:SF17 1 301 2.6E-190 T 26-04-2016 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 8.3E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS03900 8c3bc122de6c882214a6e6f010428f02 307 Gene3D G3DSA:3.40.190.10 173 264 4.3E-16 T 26-04-2016 PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 PANTHER PTHR30041:SF1 5 228 9.5E-146 T 26-04-2016 PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 Pfam PF03358 NADPH-dependent FMN reductase 24 166 8.4E-27 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 20 216 2.8E-121 T 26-04-2016 IPR014063 Arsenate resistance ArsH PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 PANTHER PTHR30041 5 228 9.5E-146 T 26-04-2016 PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 SUPERFAMILY SSF52218 21 217 2.3E-62 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS14185 8b799cda8c79c7c995d639f26e425085 230 Gene3D G3DSA:3.40.50.360 19 220 3.1E-102 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 PANTHER PTHR30505 1 154 1.0E-72 T 26-04-2016 PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 149 8.8E-61 T 26-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 Gene3D G3DSA:3.40.930.10 1 149 4.1E-43 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 SUPERFAMILY SSF55804 1 147 1.29E-41 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 PANTHER PTHR30505:SF6 1 154 1.0E-72 T 26-04-2016 PAM18_RS23270 9c96050bcb591bc4db01df1bf5eb0666 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 147 1.2E-34 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF01706 FliG C-terminal domain 223 329 4.4E-41 T 26-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 12 122 8.24E-24 T 26-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 3.6E-65 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14842 FliG N-terminal domain 9 108 1.5E-33 T 26-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 200 338 2.2E-43 T 26-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 336 2.3E-102 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 13 76 5.6E-16 T 26-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 109 194 9.6E-29 T 26-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PANTHER PTHR30534 1 338 8.1E-116 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 119 330 2.49E-69 T 26-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14841 FliG middle domain 120 193 3.9E-24 T 26-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PANTHER PTHR30534:SF0 1 338 8.1E-116 T 26-04-2016 PAM18_RS20080 088b736bb2473edf83917cc158a2e0b6 338 PIRSF PIRSF003161 5 338 3.5E-118 T 26-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 PIRSF PIRSF000161 1 268 3.9E-88 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 26-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 6.4E-44 T 26-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 266 1.4E-100 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 PANTHER PTHR20836:SF0 3 267 6.1E-100 T 26-04-2016 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 266 36.014 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF51735 1 127 3.23E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF51735 237 267 3.23E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 Gene3D G3DSA:3.40.50.720 2 164 5.7E-57 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF55347 128 237 1.79E-37 T 26-04-2016 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 1.4E-39 T 26-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS24925 f92f02fcc6aba2eb9c5ed8694addf071 268 PANTHER PTHR20836 3 267 6.1E-100 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Pfam PF00593 TonB dependent receptor 709 988 3.4E-30 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Gene3D G3DSA:2.40.170.20 702 989 4.3E-83 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Gene3D G3DSA:2.40.170.20 287 309 4.3E-83 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Gene3D G3DSA:2.40.170.20 345 605 4.3E-83 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 PANTHER PTHR30442 33 892 1.1E-232 T 26-04-2016 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Gene3D G3DSA:2.170.130.10 175 286 8.6E-28 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 Pfam PF07715 TonB-dependent Receptor Plug Domain 178 281 4.3E-17 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 972 989 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 SUPERFAMILY SSF56935 336 605 4.33E-86 T 26-04-2016 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 SUPERFAMILY SSF56935 702 845 4.33E-86 T 26-04-2016 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 SUPERFAMILY SSF56935 877 989 4.33E-86 T 26-04-2016 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 SUPERFAMILY SSF56935 161 308 4.33E-86 T 26-04-2016 PAM18_RS25630 97218ca13db6d4e32e591900cce41b76 989 SMART SM00965 97 148 2.7E-12 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 SUPERFAMILY SSF53901 8 323 1.83E-56 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 185 1.1E-24 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 Gene3D G3DSA:3.40.47.10 159 324 3.0E-49 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 PANTHER PTHR34069 1 329 5.0E-134 T 26-04-2016 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 2.6E-32 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 322 63.647 T 26-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 Gene3D G3DSA:3.40.47.10 3 158 3.8E-48 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 322 4.8E-99 T 26-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS08385 5c9370c1fd23f1ce52bf7198911d4a86 330 PANTHER PTHR34069:SF2 1 329 5.0E-134 T 26-04-2016 PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 SUPERFAMILY SSF56300 150 231 1.82E-24 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 SUPERFAMILY SSF56300 1 107 1.82E-24 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 214 8.2E-10 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 PANTHER PTHR37844 1 247 2.0E-73 T 26-04-2016 PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 Gene3D G3DSA:3.60.21.10 142 236 9.6E-15 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS02755 c4c98711cba1ac49f85b5ac69697cec6 247 Gene3D G3DSA:3.60.21.10 1 66 9.6E-15 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 PANTHER PTHR11695:SF558 18 335 6.7E-141 T 26-04-2016 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 Gene3D G3DSA:3.40.50.720 157 265 3.2E-18 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 PANTHER PTHR11695 18 335 6.7E-141 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.9E-6 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 26-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 SUPERFAMILY SSF50129 9 137 1.48E-33 T 26-04-2016 IPR011032 GroES-like PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 SUPERFAMILY SSF51735 117 287 1.12E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 Gene3D G3DSA:3.90.180.10 18 156 5.6E-36 T 26-04-2016 IPR011032 GroES-like PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 2.5E-177 T 26-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 SMART SM00829 16 334 7.3E-12 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS07305 191d53dad0755775ed02a51c760d4d4c 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 1.7E-24 T 26-04-2016 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 PANTHER PTHR11119 1 455 1.7E-253 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 448 1.3E-121 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 4.0E-128 T 26-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 Pfam PF00860 Permease family 29 420 2.3E-94 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS01775 fc83a4ca9910cbd9e371c34f70303f53 461 PANTHER PTHR11119:SF44 1 455 1.7E-253 T 26-04-2016 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 Gene3D G3DSA:3.90.1150.10 259 360 6.6E-42 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 PANTHER PTHR21152 2 361 1.0E-193 T 26-04-2016 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 6 360 1.8E-166 T 26-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 PANTHER PTHR21152:SF1 2 361 1.0E-193 T 26-04-2016 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 PIRSF PIRSF000525 1 361 6.8E-151 T 26-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 SUPERFAMILY SSF53383 4 359 1.64E-117 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 Pfam PF00266 Aminotransferase class-V 6 349 1.9E-49 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 Gene3D G3DSA:3.40.640.10 19 258 7.0E-109 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS09250 a30c261c0313c31cacf44c22cbc5d88b 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 360 51.871 T 26-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 PAM18_RS18020 4090c02117311a077c68f9b088810091 248 SUPERFAMILY SSF53850 28 247 5.43E-21 T 26-04-2016 PAM18_RS18020 4090c02117311a077c68f9b088810091 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 247 5.0E-11 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS18020 4090c02117311a077c68f9b088810091 248 Gene3D G3DSA:3.40.190.10 210 247 1.3E-5 T 26-04-2016 PAM18_RS18020 4090c02117311a077c68f9b088810091 248 Gene3D G3DSA:3.40.190.10 44 117 1.3E-5 T 26-04-2016 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.3E-27 T 26-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 Hamap MF_00564 Ribonuclease PH [rph]. 2 238 49.641 T 26-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 6.3E-115 T 26-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 Gene3D G3DSA:3.30.230.70 8 238 4.9E-36 T 26-04-2016 IPR027408 PNPase/RNase PH domain PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 5.0E-10 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 PANTHER PTHR11953:SF0 1 239 4.5E-91 T 26-04-2016 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF55666 153 238 7.98E-27 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 PANTHER PTHR11953 1 239 4.5E-91 T 26-04-2016 PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 26-04-2016 IPR018336 Ribonuclease PH, conserved site PAM18_RS27865 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF54211 3 182 6.07E-47 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 Gene3D G3DSA:3.40.50.720 102 159 1.4E-5 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 Pfam PF02625 XdhC and CoxI family 11 71 2.9E-18 T 26-04-2016 IPR003777 XdhC- CoxI PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 PANTHER PTHR30388:SF5 1 278 1.4E-167 T 26-04-2016 PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 PANTHER PTHR30388 1 278 1.4E-167 T 26-04-2016 PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 18 248 2.0E-99 T 26-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 SUPERFAMILY SSF51735 97 188 1.8E-12 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18065 68747c039e96ccc5a4fa27d663a4f8a7 279 Pfam PF13478 XdhC Rossmann domain 106 247 1.1E-37 T 26-04-2016 IPR027051 XdhC Rossmann domain PAM18_RS24320 9ea90818f65d27cb0e1ba2dd6727e5ca 252 Gene3D G3DSA:3.40.50.720 2 248 3.0E-73 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24320 9ea90818f65d27cb0e1ba2dd6727e5ca 252 Pfam PF00899 ThiF family 10 243 1.1E-59 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS24320 9ea90818f65d27cb0e1ba2dd6727e5ca 252 PANTHER PTHR10953 1 247 8.0E-91 T 26-04-2016 PAM18_RS24320 9ea90818f65d27cb0e1ba2dd6727e5ca 252 SUPERFAMILY SSF69572 2 247 7.19E-83 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PAM18_RS24320 9ea90818f65d27cb0e1ba2dd6727e5ca 252 PANTHER PTHR10953:SF158 1 247 8.0E-91 T 26-04-2016 PAM18_RS19560 03994d4a51cd85208d822064037f968c 157 Pfam PF08982 Domain of unknown function (DUF1857) 16 147 2.2E-24 T 26-04-2016 IPR015075 Protein of unknown function DUF1857 PAM18_RS19560 03994d4a51cd85208d822064037f968c 157 SUPERFAMILY SSF55961 1 149 8.79E-43 T 26-04-2016 PAM18_RS19560 03994d4a51cd85208d822064037f968c 157 Gene3D G3DSA:3.30.530.20 1 152 6.1E-51 T 26-04-2016 IPR023393 START-like domain PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 PANTHER PTHR10245 1 210 2.9E-72 T 26-04-2016 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 Pfam PF01381 Helix-turn-helix 36 86 2.9E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 SMART SM00530 33 88 1.7E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 SUPERFAMILY SSF51182 73 207 1.54E-20 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 SUPERFAMILY SSF47413 29 91 9.65E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 Gene3D G3DSA:1.10.260.40 28 91 1.3E-20 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 PANTHER PTHR10245:SF9 1 210 2.9E-72 T 26-04-2016 PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 Pfam PF07883 Cupin domain 143 201 1.1E-10 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS14025 771c17ad02407e6cd438cda711353890 210 Gene3D G3DSA:2.60.120.10 115 207 1.8E-28 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS21305 6f6d2e2a17d5df651f81c5fa8b6e598f 137 SUPERFAMILY SSF75620 8 117 6.28E-13 T 26-04-2016 PAM18_RS21305 6f6d2e2a17d5df651f81c5fa8b6e598f 137 Gene3D G3DSA:3.30.160.200 4 107 1.5E-34 T 26-04-2016 PAM18_RS21305 6f6d2e2a17d5df651f81c5fa8b6e598f 137 Pfam PF00472 RF-1 domain 6 132 1.8E-27 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS21305 6f6d2e2a17d5df651f81c5fa8b6e598f 137 PANTHER PTHR11075 8 137 2.4E-43 T 26-04-2016 PAM18_RS21305 6f6d2e2a17d5df651f81c5fa8b6e598f 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 Pfam PF04773 FecR protein 119 209 5.9E-19 T 26-04-2016 IPR006860 FecR protein PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 PIRSF PIRSF018266 12 327 3.3E-90 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 PANTHER PTHR30273 13 327 1.0E-99 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 Pfam PF16220 Domain of unknown function (DUF4880) 22 63 9.7E-12 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 Pfam PF16344 Domain of unknown function (DUF4974) 226 306 6.7E-8 T 26-04-2016 IPR032508 Protein FecR, C-terminal PAM18_RS18440 3ab38b2acbf9bd09374c8dc955f30500 327 PANTHER PTHR30273:SF2 13 327 1.0E-99 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 SMART SM00354 1 71 7.6E-32 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 SUPERFAMILY SSF47413 1 59 2.38E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.9E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.9E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:1.10.260.40 2 53 2.6E-22 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 SUPERFAMILY SSF53822 61 333 7.4E-90 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.5E-41 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:3.40.50.2300 54 172 2.4E-49 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 PANTHER PTHR30146 1 336 8.6E-147 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 PANTHER PTHR30146:SF30 1 336 8.6E-147 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:3.40.50.2300 173 311 1.3E-52 T 26-04-2016 PAM18_RS15870 40f1b641b669af4b58987739a7fe62d7 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-16 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 SUPERFAMILY SSF111369 50 293 1.83E-65 T 26-04-2016 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 PANTHER PTHR30158 1 372 2.0E-263 T 26-04-2016 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 358 9.7E-79 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 PANTHER PTHR30158:SF9 1 372 2.0E-263 T 26-04-2016 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 286 3.9E-19 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 Gene3D G3DSA:2.40.50.100 170 202 1.4E-20 T 26-04-2016 PAM18_RS07530 9603481ff10388adee801c9e57aa2714 385 Gene3D G3DSA:2.40.50.100 61 95 1.4E-20 T 26-04-2016 PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 Pfam PF00916 Sulfate permease family 27 385 2.9E-71 T 26-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 Gene3D G3DSA:3.30.750.24 426 503 1.0E-12 T 26-04-2016 IPR002645 STAS domain PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 Pfam PF13466 STAS domain 451 503 1.4E-7 T 26-04-2016 IPR002645 STAS domain PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 PANTHER PTHR11814:SF71 1 506 1.3E-207 T 26-04-2016 PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 SUPERFAMILY SSF52091 425 503 1.2E-13 T 26-04-2016 IPR002645 STAS domain PAM18_RS00145 f5a9c14260409bcfa9bf6fb6a06e532b 517 PANTHER PTHR11814 1 506 1.3E-207 T 26-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 SMART SM00052 274 519 2.5E-71 T 26-04-2016 IPR001633 EAL domain PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 Gene3D G3DSA:3.20.20.450 279 527 4.5E-70 T 26-04-2016 IPR001633 EAL domain PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 Pfam PF00563 EAL domain 281 513 5.2E-55 T 26-04-2016 IPR001633 EAL domain PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 SUPERFAMILY SSF141868 281 527 2.48E-66 T 26-04-2016 IPR001633 EAL domain PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 PANTHER PTHR33121:SF16 1 529 1.8E-275 T 26-04-2016 PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 Pfam PF12792 CSS motif domain associated with EAL 46 241 8.5E-34 T 26-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAM18_RS14560 ba26c279fc5efd065a2e18bcf400bd06 531 PANTHER PTHR33121 1 529 1.8E-275 T 26-04-2016 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 1 82 1.12E-22 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PIRSF PIRSF002162 1 177 2.1E-46 T 26-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PANTHER PTHR11655 1 176 3.1E-90 T 26-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 2 82 4.7E-28 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 83 177 4.5E-41 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 26-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.3E-76 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 83 177 3.17E-36 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-34 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-34 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-34 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.095 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 12 82 2.4E-16 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 90 164 7.8E-19 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS03500 498ad56a7234b8f83975d6c9b437e371 177 PANTHER PTHR11655:SF14 1 176 3.1E-90 T 26-04-2016 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 PANTHER PTHR39209 4 237 1.1E-128 T 26-04-2016 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 SMART SM00873 64 216 1.7E-15 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 Gene3D G3DSA:3.50.40.10 64 191 6.6E-9 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 PANTHER PTHR39209:SF2 4 237 1.1E-128 T 26-04-2016 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 SUPERFAMILY SSF56037 54 213 1.41E-26 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAM18_RS03865 6527e4b046ba1fcdfaaa36f119beecd1 239 Pfam PF03483 B3/4 domain 66 195 2.1E-16 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 PIRSF PIRSF038971 3 387 2.7E-146 T 26-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 Pfam PF07969 Amidohydrolase family 179 387 3.0E-7 T 26-04-2016 IPR013108 Amidohydrolase 3 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 SUPERFAMILY SSF51338 353 385 7.44E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 SUPERFAMILY SSF51338 3 54 7.44E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 Gene3D G3DSA:2.30.40.10 6 94 1.5E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 387 2.4E-149 T 26-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 PANTHER PTHR11271:SF43 165 387 4.2E-205 T 26-04-2016 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 PANTHER PTHR11271:SF43 6 147 4.2E-205 T 26-04-2016 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 SUPERFAMILY SSF51556 54 353 8.85E-16 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 PANTHER PTHR11271 165 387 4.2E-205 T 26-04-2016 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 PANTHER PTHR11271 6 147 4.2E-205 T 26-04-2016 PAM18_RS08180 86a8c777e8f49e583210282c7cc5ca06 387 Gene3D G3DSA:3.20.20.140 297 364 1.4E-4 T 26-04-2016 PAM18_RS05905 c33466ef06116e37984eabdd50456781 260 PANTHER PTHR30269 18 260 2.4E-74 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS05905 c33466ef06116e37984eabdd50456781 260 Pfam PF01925 Sulfite exporter TauE/SafE 25 252 2.7E-29 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS05905 c33466ef06116e37984eabdd50456781 260 PANTHER PTHR30269:SF14 18 260 2.4E-74 T 26-04-2016 PAM18_RS19910 5c055f1ca2c8b8153bfe8eba3b0b416f 137 PANTHER PTHR33639:SF1 5 135 2.5E-41 T 26-04-2016 PAM18_RS19910 5c055f1ca2c8b8153bfe8eba3b0b416f 137 PANTHER PTHR33639 5 135 2.5E-41 T 26-04-2016 PAM18_RS19910 5c055f1ca2c8b8153bfe8eba3b0b416f 137 Pfam PF04134 Protein of unknown function, DUF393 14 122 1.3E-20 T 26-04-2016 IPR007263 Protein of unknown function DUF393 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.7E-90 T 26-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 40.365 T 26-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 26-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 Gene3D G3DSA:3.10.310.10 123 264 9.6E-53 T 26-04-2016 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 PANTHER PTHR31689 1 276 9.2E-137 T 26-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 PANTHER PTHR31689:SF0 1 276 9.2E-137 T 26-04-2016 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 Gene3D G3DSA:3.10.310.10 3 122 1.3E-48 T 26-04-2016 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 SUPERFAMILY SSF54506 3 276 3.77E-52 T 26-04-2016 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 Pfam PF01678 Diaminopimelate epimerase 154 269 4.3E-30 T 26-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS27585 15c40745818dbc6a3121094a2d217019 276 Pfam PF01678 Diaminopimelate epimerase 5 125 8.3E-33 T 26-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 Gene3D G3DSA:3.40.50.300 1112 1197 5.6E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 Gene3D G3DSA:3.40.50.300 1 179 3.9E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 SUPERFAMILY SSF52540 1 288 1.85E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 Pfam PF13555 P-loop containing region of AAA domain 26 67 4.4E-7 T 26-04-2016 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114 575 738 1.8E-145 T 26-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114 809 1211 1.8E-145 T 26-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114 2 558 1.8E-145 T 26-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 SUPERFAMILY SSF52540 892 991 1.78E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 SUPERFAMILY SSF52540 1059 1203 1.78E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114:SF2 575 738 1.8E-145 T 26-04-2016 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114:SF2 809 1211 1.8E-145 T 26-04-2016 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 PANTHER PTHR32114:SF2 2 558 1.8E-145 T 26-04-2016 PAM18_RS22345 adc72141df2a6391977e138121cbd76d 1211 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1099 1169 2.0E-12 T 26-04-2016 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 SUPERFAMILY SSF46767 78 158 4.05E-31 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 Gene3D G3DSA:1.10.10.10 77 159 1.9E-34 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 76 2.0E-8 T 26-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 161 36.606 T 26-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 PANTHER PTHR10815 4 158 1.8E-61 T 26-04-2016 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 SUPERFAMILY SSF53155 5 84 2.94E-16 T 26-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 4.9E-35 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 PANTHER PTHR10815:SF5 4 158 1.8E-61 T 26-04-2016 PAM18_RS20690 ca24b024ed0e0052bbf948d1b64e6be6 173 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 158 1.7E-31 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 SUPERFAMILY SSF55920 231 268 2.49E-21 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 SUPERFAMILY SSF55920 7 204 2.49E-21 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 PANTHER PTHR10804:SF92 1 168 2.0E-100 T 26-04-2016 PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 PANTHER PTHR10804 1 168 2.0E-100 T 26-04-2016 PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 Gene3D G3DSA:3.90.230.10 9 268 3.5E-24 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS08435 a02b0854c24c7028e5a5c86858c0339a 291 Pfam PF00557 Metallopeptidase family M24 15 262 6.1E-24 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 Gene3D G3DSA:1.10.10.60 160 218 4.7E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 Gene3D G3DSA:2.60.120.10 23 99 8.4E-14 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 SMART SM00342 182 264 5.4E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 PANTHER PTHR11019 1 265 1.5E-140 T 26-04-2016 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 Gene3D G3DSA:1.10.10.60 219 263 1.2E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 Pfam PF07883 Cupin domain 33 93 1.4E-6 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 SUPERFAMILY SSF46689 218 263 1.39E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 Pfam PF12833 Helix-turn-helix domain 188 264 4.0E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 PANTHER PTHR11019:SF99 1 265 1.5E-140 T 26-04-2016 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 SUPERFAMILY SSF51182 13 219 1.19E-24 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 7.9E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS05620 c3348ccb767ceeb9ee815ab69701a694 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 7.9E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS22285 c919efc3bdbc4ebd1fc18979b837218d 238 Gene3D G3DSA:3.30.1150.10 134 212 1.8E-7 T 26-04-2016 PAM18_RS22285 c919efc3bdbc4ebd1fc18979b837218d 238 PANTHER PTHR30442 1 238 4.6E-80 T 26-04-2016 PAM18_RS22285 c919efc3bdbc4ebd1fc18979b837218d 238 Pfam PF13103 TonB C terminal 136 198 4.8E-5 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS22285 c919efc3bdbc4ebd1fc18979b837218d 238 SUPERFAMILY SSF74653 126 210 3.14E-10 T 26-04-2016 PAM18_RS22285 c919efc3bdbc4ebd1fc18979b837218d 238 SMART SM00965 63 114 1.1E-10 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 PANTHER PTHR21666 182 455 1.3E-79 T 26-04-2016 PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 Pfam PF04225 Opacity-associated protein A LysM-like domain 112 192 5.4E-11 T 26-04-2016 IPR007340 Opacity-associated protein A PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 Gene3D G3DSA:2.70.70.10 290 436 8.2E-47 T 26-04-2016 PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 SUPERFAMILY SSF51261 187 435 2.88E-73 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 Pfam PF01551 Peptidase family M23 338 434 1.3E-32 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS03285 bcd48bf12b52d044a1e5cb2ec5885a96 478 PANTHER PTHR21666:SF221 182 455 1.3E-79 T 26-04-2016 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 Pfam PF12411 Choline sulfatase enzyme C terminal 449 500 1.4E-24 T 26-04-2016 IPR025863 Choline sulfatase enzyme C-terminal domain UniPathway: UPA00290 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 Pfam PF00884 Sulfatase 5 347 1.2E-51 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 Gene3D G3DSA:3.40.720.10 2 368 9.1E-92 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 Gene3D G3DSA:3.30.1120.10 369 426 1.3E-10 T 26-04-2016 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 PANTHER PTHR10342:SF207 5 460 3.4E-137 T 26-04-2016 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 4 501 8.9E-265 T 26-04-2016 IPR017785 Choline-sulfatase UniPathway: UPA00290 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 ProSitePatterns PS00149 Sulfatases signature 2. 94 104 - T 26-04-2016 IPR024607 Sulfatase, conserved site PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 SUPERFAMILY SSF53649 254 478 1.74E-113 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 SUPERFAMILY SSF53649 2 211 1.74E-113 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS00155 be213b3de6179142975bacc68a5d14fd 503 PANTHER PTHR10342 5 460 3.4E-137 T 26-04-2016 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 PANTHER PTHR30469 5 354 3.6E-233 T 26-04-2016 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 264 1.3E-17 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 SUPERFAMILY SSF111369 47 274 8.63E-24 T 26-04-2016 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 351 5.1E-74 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 Gene3D G3DSA:2.40.50.100 62 89 1.9E-13 T 26-04-2016 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 Gene3D G3DSA:2.40.50.100 164 195 1.9E-13 T 26-04-2016 PAM18_RS00795 ee3debc7f5f111db74575a83dcac343f 356 PANTHER PTHR30469:SF14 5 354 3.6E-233 T 26-04-2016 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PANTHER PTHR30330 1 465 5.3E-256 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 431 1.2E-142 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 175 193 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 84 106 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 203 222 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 294 312 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 340 362 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PRINTS PR00175 Sodium/alanine symporter signature 400 420 3.8E-47 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 Pfam PF01235 Sodium:alanine symporter family 50 444 7.3E-146 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 PANTHER PTHR30330:SF1 1 465 5.3E-256 T 26-04-2016 PAM18_RS14325 3182f74dc613b2ccba221d77f6780761 481 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 PIRSF PIRSF002741 22 535 1.6E-118 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 PANTHER PTHR30290 1 535 2.2E-219 T 26-04-2016 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 Gene3D G3DSA:3.10.105.10 292 506 4.1E-67 T 26-04-2016 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 SUPERFAMILY SSF53850 32 534 1.32E-152 T 26-04-2016 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 Gene3D G3DSA:3.90.76.10 40 220 2.7E-50 T 26-04-2016 PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 454 3.3E-102 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS23430 2bfb77a9d5897418650ca7d05ec490a2 537 PANTHER PTHR30290:SF14 1 535 2.2E-219 T 26-04-2016 PAM18_RS28985 754ac21fefe37d893802b1dbbf9e02a0 313 SUPERFAMILY SSF51197 33 283 4.81E-27 T 26-04-2016 PAM18_RS28985 754ac21fefe37d893802b1dbbf9e02a0 313 Gene3D G3DSA:2.60.120.330 85 285 6.1E-28 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS28985 754ac21fefe37d893802b1dbbf9e02a0 313 PANTHER PTHR10209 105 215 5.8E-18 T 26-04-2016 PAM18_RS28985 754ac21fefe37d893802b1dbbf9e02a0 313 PANTHER PTHR10209 235 287 5.8E-18 T 26-04-2016 PAM18_RS28985 754ac21fefe37d893802b1dbbf9e02a0 313 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 158 250 1.5E-7 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 PANTHER PTHR30451:SF7 577 863 0.0 T 26-04-2016 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 PANTHER PTHR30451:SF7 1 558 0.0 T 26-04-2016 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 Pfam PF00577 Outer membrane usher protein 197 771 7.5E-143 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 Pfam PF13953 PapC C-terminal domain 780 843 4.7E-21 T 26-04-2016 IPR025949 PapC-like, C-terminal domain PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 26-04-2016 IPR018030 Fimbrial membrane usher, conserved site PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 Pfam PF13954 PapC N-terminal domain 35 179 3.0E-39 T 26-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 PANTHER PTHR30451 577 863 0.0 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 PANTHER PTHR30451 1 558 0.0 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS14940 0ad3568c234f14020acdc95f0e4cd1be 872 SUPERFAMILY SSF141729 34 157 3.79E-28 T 26-04-2016 PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 PANTHER PTHR12962:SF1 143 227 4.4E-32 T 26-04-2016 PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 Pfam PF00313 'Cold-shock' DNA-binding domain 22 73 3.9E-9 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 Pfam PF06961 Protein of unknown function (DUF1294) 153 207 7.1E-24 T 26-04-2016 IPR010718 Protein of unknown function DUF1294 PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 ProSitePatterns PS00352 'Cold-shock' domain signature. 29 48 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 Gene3D G3DSA:2.40.50.140 17 79 5.7E-18 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 PANTHER PTHR12962 143 227 4.4E-32 T 26-04-2016 PAM18_RS15815 04a4cbfe3ef68b517636ef942c08eaa1 240 SUPERFAMILY SSF50249 10 78 3.67E-13 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12640 a7c5211e8bb4b34d482459b39371d1e2 120 Pfam PF02924 Bacteriophage lambda head decoration protein D 3 102 8.1E-29 T 26-04-2016 IPR004195 Head decoration protein D GO:0019028 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 26-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 144 180 2.1E-28 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 231 266 2.1E-28 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 1.2E-95 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 26-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF46934 3 56 2.35E-16 T 26-04-2016 IPR009060 UBA-like GO:0005515 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:1.10.286.20 186 230 4.0E-13 T 26-04-2016 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Hamap MF_00050 Elongation factor Ts [tsf]. 1 284 72.415 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 PANTHER PTHR11741 1 287 8.6E-122 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Pfam PF00889 Elongation factor TS 73 267 6.3E-59 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 143 284 6.41E-49 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:1.10.8.10 2 55 2.6E-24 T 26-04-2016 PAM18_RS06535 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 56 141 6.21E-14 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 Pfam PF05935 Arylsulfotransferase (ASST) 86 373 1.3E-23 T 26-04-2016 IPR010262 Arylsulfotransferase PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 SUPERFAMILY SSF50998 290 389 3.14E-7 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 SUPERFAMILY SSF50998 34 125 3.14E-7 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 SUPERFAMILY SSF50998 207 257 3.14E-7 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 PANTHER PTHR35340 1 441 1.2E-201 T 26-04-2016 PAM18_RS13910 249aaad05250be24fdddcf071d6ebc63 441 PANTHER PTHR35340:SF3 1 441 1.2E-201 T 26-04-2016 PAM18_RS15525 2c0ea2fae519e7dd46bca4482cb70146 309 SUPERFAMILY SSF50956 11 304 2.75E-46 T 26-04-2016 PAM18_RS15525 2c0ea2fae519e7dd46bca4482cb70146 309 Gene3D G3DSA:2.120.10.30 70 294 2.0E-9 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS15525 2c0ea2fae519e7dd46bca4482cb70146 309 Pfam PF06977 SdiA-regulated 51 302 8.4E-96 T 26-04-2016 IPR009722 SdiA-regulated PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 Gene3D G3DSA:3.40.190.10 90 172 9.0E-17 T 26-04-2016 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.6E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 Gene3D G3DSA:3.40.190.10 173 267 4.1E-31 T 26-04-2016 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 SUPERFAMILY SSF46785 2 112 2.04E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 Gene3D G3DSA:1.10.10.10 2 81 5.8E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.6E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.6E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.6E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 PANTHER PTHR30346:SF13 1 293 3.8E-200 T 26-04-2016 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 Pfam PF03466 LysR substrate binding domain 90 295 1.1E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 SUPERFAMILY SSF53850 91 295 1.38E-40 T 26-04-2016 PAM18_RS02485 4e3e4aa7228088bcd59423d797237f01 305 PANTHER PTHR30346 1 293 3.8E-200 T 26-04-2016 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.0E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.0E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.3E-16 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 Gene3D G3DSA:1.10.357.10 2 193 1.2E-38 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 PANTHER PTHR30328 2 196 3.4E-80 T 26-04-2016 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 PANTHER PTHR30328:SF3 2 196 3.4E-80 T 26-04-2016 PAM18_RS14235 5dfd90304a8517b6ea8cf42de649296b 196 SUPERFAMILY SSF46689 3 86 4.24E-21 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 PANTHER PTHR11019 10 265 4.6E-101 T 26-04-2016 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 SUPERFAMILY SSF51215 22 146 2.35E-16 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 3.0E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 3.0E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 PANTHER PTHR11019:SF139 10 265 4.6E-101 T 26-04-2016 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 SUPERFAMILY SSF46689 166 213 7.17E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 Gene3D G3DSA:1.10.10.60 217 263 5.7E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 SMART SM00342 179 261 8.8E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 Gene3D G3DSA:2.60.120.280 18 147 5.7E-13 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 257 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 Pfam PF12833 Helix-turn-helix domain 185 262 3.5E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 Gene3D G3DSA:1.10.10.60 164 216 6.8E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 SUPERFAMILY SSF46689 216 263 2.91E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27905 efb037a9a666191dc61314d801dd1471 266 Pfam PF02311 AraC-like ligand binding domain 13 142 8.4E-26 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS24210 364020ed9e2860f55618740b57ec402e 137 PANTHER PTHR33990 1 134 6.5E-36 T 26-04-2016 PAM18_RS24210 364020ed9e2860f55618740b57ec402e 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 131 1.5E-11 T 26-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PAM18_RS24210 364020ed9e2860f55618740b57ec402e 137 Gene3D G3DSA:3.10.180.10 8 134 2.2E-42 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS24210 364020ed9e2860f55618740b57ec402e 137 PANTHER PTHR33990:SF1 1 134 6.5E-36 T 26-04-2016 PAM18_RS24210 364020ed9e2860f55618740b57ec402e 137 SUPERFAMILY SSF54593 1 135 9.35E-35 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.6E-140 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 PANTHER PTHR11835 2 360 3.6E-213 T 26-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 SMART SM01329 4 353 1.8E-212 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 Gene3D G3DSA:3.40.718.10 1 358 7.2E-134 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.3E-163 T 26-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 PANTHER PTHR11835:SF35 2 360 3.6E-213 T 26-04-2016 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 26-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 SUPERFAMILY SSF53659 2 359 2.88E-126 T 26-04-2016 PAM18_RS09475 d405ba3087c78f64e14ea213f120c3da 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 53.49 T 26-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 PANTHER PTHR33490:SF5 1 256 2.2E-162 T 26-04-2016 PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 Pfam PF01841 Transglutaminase-like superfamily 111 212 3.8E-22 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 7.2E-20 T 26-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 SMART SM00460 153 215 6.1E-16 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 SUPERFAMILY SSF54001 51 258 9.81E-48 T 26-04-2016 PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 PANTHER PTHR33490 1 256 2.2E-162 T 26-04-2016 PAM18_RS16995 abfe5305a32bb6b2a268644207af9972 266 Gene3D G3DSA:3.90.260.10 105 253 2.5E-12 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS28205 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SUPERFAMILY SSF111126 6 144 2.98E-17 T 26-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain PAM18_RS28205 83c41cbba3fb8e22fe8c772c14b9ca6b 176 Gene3D G3DSA:3.30.1380.20 4 144 1.4E-22 T 26-04-2016 PAM18_RS28205 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SMART SM00989 107 175 3.7E-4 T 26-04-2016 IPR004096 4-vinyl reductase, 4VR PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF54423 27 86 3.92E-21 T 26-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.40.30.10 114 254 3.3E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 PANTHER PTHR35272 1 256 3.8E-177 T 26-04-2016 PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 Pfam PF13098 Thioredoxin-like domain 123 253 5.6E-16 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF52833 96 253 8.25E-38 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.10.450.70 62 87 2.9E-5 T 26-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PAM18_RS13200 0f8f04acaa73c2c26ac8629b80720935 256 PANTHER PTHR35272:SF2 1 256 3.8E-177 T 26-04-2016 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:2.70.210.12 2 156 5.4E-60 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:3.40.50.300 160 342 9.0E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PANTHER PTHR11702:SF3 1 356 5.2E-178 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PANTHER PTHR11702:SF3 373 396 5.2E-178 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 4.8E-145 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.8E-21 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF82051 2 158 2.62E-57 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 26-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PIRSF PIRSF002401 1 378 1.3E-136 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF52540 151 339 7.25E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PANTHER PTHR11702 1 356 5.2E-178 T 26-04-2016 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PANTHER PTHR11702 373 396 5.2E-178 T 26-04-2016 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01018 GTP1/OBG 3 158 4.8E-62 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 PAM18_RS23810 3250e70161daaf149ca278e456bf69e0 406 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.483 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PAM18_RS08685 6468fd850095f5d2d8239b7e83756e40 109 SUPERFAMILY SSF103481 6 106 1.1E-7 T 26-04-2016 PAM18_RS08685 6468fd850095f5d2d8239b7e83756e40 109 PANTHER PTHR36116:SF1 1 109 4.4E-48 T 26-04-2016 PAM18_RS08685 6468fd850095f5d2d8239b7e83756e40 109 PANTHER PTHR36116 1 109 4.4E-48 T 26-04-2016 PAM18_RS08685 6468fd850095f5d2d8239b7e83756e40 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 106 4.4E-27 T 26-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PAM18_RS08685 6468fd850095f5d2d8239b7e83756e40 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 22.637 T 26-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 PAM18_RS06650 9d967f9019d28f375d7fc8f41695c385 82 SUPERFAMILY SSF64307 5 77 3.79E-20 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS06650 9d967f9019d28f375d7fc8f41695c385 82 PANTHER PTHR33279 1 81 6.7E-19 T 26-04-2016 PAM18_RS06650 9d967f9019d28f375d7fc8f41695c385 82 Gene3D G3DSA:3.30.110.40 7 77 1.3E-23 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS06650 9d967f9019d28f375d7fc8f41695c385 82 Pfam PF01206 Sulfurtransferase TusA 11 77 2.8E-18 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 Pfam PF04055 Radical SAM superfamily 56 207 1.1E-13 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 PIRSF PIRSF001619 1 325 4.3E-136 T 26-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 SMART SM00876 226 318 3.6E-48 T 26-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 316 9.7E-21 T 26-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 SUPERFAMILY SSF102114 11 320 1.31E-92 T 26-04-2016 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 Gene3D G3DSA:3.20.20.70 11 320 1.9E-104 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 SMART SM00729 49 261 1.4E-39 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 TIGRFAM TIGR00433 bioB: biotin synthase 21 316 7.9E-125 T 26-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 PANTHER PTHR22976:SF1 1 352 3.2E-193 T 26-04-2016 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 Hamap MF_01694 Biotin synthase [bioB]. 11 319 41.902 T 26-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02530 e3c12ab3cd7cc2ebe8b29cda96aff50f 352 PANTHER PTHR22976 1 352 3.2E-193 T 26-04-2016 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 303 321 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 91 113 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 406 426 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 210 229 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 345 367 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 182 200 9.2E-59 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 Pfam PF01235 Sodium:alanine symporter family 53 448 2.2E-160 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PANTHER PTHR30330:SF1 2 469 1.5E-290 T 26-04-2016 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 2.3E-152 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS06605 25e7bd0908dec60807b7b23ca29e5615 471 PANTHER PTHR30330 2 469 1.5E-290 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 837 0.0 T 26-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Pfam PF04408 Helicase associated domain (HA2) 394 455 4.4E-13 T 26-04-2016 IPR007502 Helicase-associated domain GO:0004386 PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 PIRSF PIRSF005496 1 838 0.0 T 26-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Gene3D G3DSA:3.40.50.300 3 164 5.1E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Pfam PF08482 ATP-dependent helicase C-terminal 694 825 4.1E-52 T 26-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 SUPERFAMILY SSF52540 30 437 3.49E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Pfam PF00270 DEAD/DEAH box helicase 19 165 3.5E-7 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 SMART SM00490 230 334 6.5E-19 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Gene3D G3DSA:3.40.50.300 208 351 7.7E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 SMART SM00487 5 189 2.1E-17 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 PANTHER PTHR18934 3 454 7.1E-173 T 26-04-2016 PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 SMART SM00847 393 496 2.0E-17 T 26-04-2016 IPR007502 Helicase-associated domain GO:0004386 PAM18_RS04975 9ec79b19485727aa2706b0fd4b430a42 838 Pfam PF00271 Helicase conserved C-terminal domain 210 333 2.3E-13 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 Gene3D G3DSA:3.30.870.10 60 254 9.0E-41 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 Pfam PF13091 PLD-like domain 80 231 2.8E-23 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 Pfam PF13091 PLD-like domain 328 466 4.5E-20 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 SUPERFAMILY SSF56024 50 251 2.47E-42 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248 280 402 1.8E-244 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248 1 261 1.8E-244 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248 418 513 1.8E-244 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 SUPERFAMILY SSF56024 284 508 1.26E-31 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 SMART SM00155 417 444 3.8E-5 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 SMART SM00155 172 199 1.0E-4 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 Gene3D G3DSA:3.30.870.10 300 489 1.1E-36 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248:SF12 280 402 1.8E-244 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248:SF12 1 261 1.8E-244 T 26-04-2016 PAM18_RS27745 3cba4d50271880ea62f9e8539337704c 529 PANTHER PTHR21248:SF12 418 513 1.8E-244 T 26-04-2016 PAM18_RS19070 6f96884d6a537accbc9b0dacf203232d 221 SUPERFAMILY SSF53335 46 190 5.87E-27 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19070 6f96884d6a537accbc9b0dacf203232d 221 Pfam PF13578 Methyltransferase domain 84 187 1.6E-14 T 26-04-2016 PAM18_RS19070 6f96884d6a537accbc9b0dacf203232d 221 PANTHER PTHR10509 63 199 7.2E-41 T 26-04-2016 PAM18_RS19070 6f96884d6a537accbc9b0dacf203232d 221 PANTHER PTHR10509:SF10 63 199 7.2E-41 T 26-04-2016 PAM18_RS19070 6f96884d6a537accbc9b0dacf203232d 221 Gene3D G3DSA:3.40.50.150 28 192 1.3E-38 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 6.5E-91 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 39.247 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 26-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 SUPERFAMILY SSF64005 10 233 2.75E-84 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 PANTHER PTHR10291 10 250 1.1E-123 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 Gene3D G3DSA:3.40.1180.10 5 244 2.2E-98 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS06550 80c48b732a673690dbdea546eec447ea 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 4.3E-78 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 PAM18_RS25555 dc28c68c70fa892bcc12b7aed841644e 255 SUPERFAMILY SSF56524 49 254 3.4E-66 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS25555 dc28c68c70fa892bcc12b7aed841644e 255 PANTHER PTHR19372:SF9 11 253 1.3E-143 T 26-04-2016 PAM18_RS25555 dc28c68c70fa892bcc12b7aed841644e 255 PANTHER PTHR19372 11 253 1.3E-143 T 26-04-2016 PAM18_RS25555 dc28c68c70fa892bcc12b7aed841644e 255 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 244 4.1E-35 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS25555 dc28c68c70fa892bcc12b7aed841644e 255 Gene3D G3DSA:3.90.420.10 86 252 6.1E-56 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 SMART SM00382 32 221 2.0E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 SMART SM00382 281 476 4.2E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 SUPERFAMILY SSF52540 271 488 5.13E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 Pfam PF00005 ABC transporter 24 173 3.0E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 Pfam PF00005 ABC transporter 273 428 2.1E-17 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 PANTHER PTHR24220 10 383 3.9E-178 T 26-04-2016 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 Gene3D G3DSA:3.40.50.300 263 490 3.1E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 SUPERFAMILY SSF52540 7 231 3.45E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 PANTHER PTHR24220:SF308 10 383 3.9E-178 T 26-04-2016 PAM18_RS15880 e8892793d3ca4905ab1458c26e8b5176 510 Gene3D G3DSA:3.40.50.300 7 235 4.1E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 Pfam PF00005 ABC transporter 20 160 6.5E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 SUPERFAMILY SSF52540 5 233 1.15E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 PANTHER PTHR24220 6 232 6.4E-73 T 26-04-2016 PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 PANTHER PTHR24220:SF589 6 232 6.4E-73 T 26-04-2016 PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 SMART SM00382 29 211 4.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS07805 34182ce34d56b9a9b49fd43241fa2a1a 249 Gene3D G3DSA:3.40.50.300 2 213 3.5E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15175 722e7ae44800d9b1c254e2bdc553f01a 169 SUPERFAMILY SSF54427 7 160 2.77E-37 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS15175 722e7ae44800d9b1c254e2bdc553f01a 169 PANTHER PTHR41534 5 169 1.1E-101 T 26-04-2016 PAM18_RS15175 722e7ae44800d9b1c254e2bdc553f01a 169 Gene3D G3DSA:3.10.450.50 9 162 4.3E-43 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS15175 722e7ae44800d9b1c254e2bdc553f01a 169 PANTHER PTHR41534:SF2 5 169 1.1E-101 T 26-04-2016 PAM18_RS15175 722e7ae44800d9b1c254e2bdc553f01a 169 Pfam PF00866 Ring hydroxylating beta subunit 23 160 3.8E-39 T 26-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SUPERFAMILY SSF46785 10 206 2.69E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PANTHER PTHR10108:SF820 39 302 1.5E-48 T 26-04-2016 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Gene3D G3DSA:1.10.10.10 7 92 2.0E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SMART SM00418 18 95 6.7E-12 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 9.6E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 9.6E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 9.6E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Pfam PF13489 Methyltransferase domain 153 296 3.6E-18 T 26-04-2016 PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Gene3D G3DSA:3.40.50.150 150 303 1.9E-32 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SUPERFAMILY SSF53335 157 313 1.67E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Pfam PF12840 Helix-turn-helix domain 19 75 1.6E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02770 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PANTHER PTHR10108 39 302 1.5E-48 T 26-04-2016 PAM18_RS03950 be295faa1302faba6a2ee674cc261519 108 SUPERFAMILY SSF110857 1 106 3.92E-21 T 26-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like PAM18_RS03950 be295faa1302faba6a2ee674cc261519 108 Gene3D G3DSA:3.10.490.10 1 107 2.0E-23 T 26-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like PAM18_RS03950 be295faa1302faba6a2ee674cc261519 108 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 106 8.7E-16 T 26-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like PAM18_RS03950 be295faa1302faba6a2ee674cc261519 108 PANTHER PTHR31544 1 104 3.1E-24 T 26-04-2016 PAM18_RS14110 ae233e4745de172b4887f506f82795a5 265 SUPERFAMILY SSF161098 61 241 9.94E-30 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14110 ae233e4745de172b4887f506f82795a5 265 Gene3D G3DSA:1.10.3720.10 58 254 1.4E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14110 ae233e4745de172b4887f506f82795a5 265 PANTHER PTHR30151:SF12 7 258 3.4E-134 T 26-04-2016 PAM18_RS14110 ae233e4745de172b4887f506f82795a5 265 PANTHER PTHR30151 7 258 3.4E-134 T 26-04-2016 PAM18_RS14110 ae233e4745de172b4887f506f82795a5 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 240 5.8E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 Pfam PF12838 4Fe-4S dicluster domain 24 89 6.5E-12 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 Pfam PF02754 Cysteine-rich domain 303 386 9.2E-13 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 Pfam PF02754 Cysteine-rich domain 171 255 3.7E-12 T 26-04-2016 IPR004017 Cysteine-rich domain PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 PANTHER PTHR32479 14 405 2.2E-138 T 26-04-2016 PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 PANTHER PTHR32479:SF2 14 405 2.2E-138 T 26-04-2016 PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 SUPERFAMILY SSF54862 18 124 1.46E-18 T 26-04-2016 PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 Gene3D G3DSA:1.10.1060.10 9 104 1.9E-21 T 26-04-2016 PAM18_RS27960 bdf6eb86a9c522ff7b2ac76ba823dee8 408 PIRSF PIRSF000139 5 408 1.3E-118 T 26-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 SUPERFAMILY SSF46689 3 76 3.44E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 Gene3D G3DSA:1.10.357.10 4 179 6.0E-33 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.1E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.1E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 PANTHER PTHR30055 3 183 5.7E-47 T 26-04-2016 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 SUPERFAMILY SSF48498 76 180 1.09E-14 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 2.3E-15 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09895 0a059a8b01f70f0f46c94f73e172a924 185 PANTHER PTHR30055:SF47 3 183 5.7E-47 T 26-04-2016 PAM18_RS05590 becacaf512ab5628e16e821825997104 324 Gene3D G3DSA:3.40.50.2300 29 158 7.0E-58 T 26-04-2016 PAM18_RS05590 becacaf512ab5628e16e821825997104 324 Pfam PF04392 ABC transporter substrate binding protein 31 322 1.5E-123 T 26-04-2016 IPR007487 ABC transporter, substrate-binding protein PAM18_RS05590 becacaf512ab5628e16e821825997104 324 SUPERFAMILY SSF53822 36 285 1.73E-24 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS05590 becacaf512ab5628e16e821825997104 324 PANTHER PTHR35271 1 324 9.9E-80 T 26-04-2016 PAM18_RS05590 becacaf512ab5628e16e821825997104 324 Gene3D G3DSA:3.40.50.2300 159 288 3.2E-52 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 Gene3D G3DSA:3.10.310.10 195 374 1.3E-81 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 PANTHER PTHR30349 1 380 2.4E-140 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 Gene3D G3DSA:3.10.310.10 2 194 2.0E-87 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 SUPERFAMILY SSF54506 189 393 3.3E-78 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 SUPERFAMILY SSF54506 3 181 3.61E-68 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 PANTHER PTHR30349:SF21 1 380 2.4E-140 T 26-04-2016 PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 Pfam PF04303 PrpF protein 6 391 1.4E-185 T 26-04-2016 IPR007400 PrpF protein PAM18_RS21670 94c3a8bab218df161330f9eff05e525b 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 395 5.9E-238 T 26-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 PANTHER PTHR10804:SF17 1 437 1.5E-168 T 26-04-2016 PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 PANTHER PTHR10804 1 437 1.5E-168 T 26-04-2016 PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF53092 4 176 1.41E-56 T 26-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 1.3E-36 T 26-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 SMART SM01011 4 138 2.6E-69 T 26-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.90.230.10 181 438 1.1E-87 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF00557 Metallopeptidase family M24 184 414 7.5E-65 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF55920 177 437 3.14E-86 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS27310 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.40.350.10 4 180 4.2E-54 T 26-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 Gene3D G3DSA:2.40.290.10 4 150 1.4E-9 T 26-04-2016 IPR016194 SPOC-like, C-terminal domain PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 260 32.198 T 26-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 SMART SM00559 53 181 6.6E-49 T 26-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 PANTHER PTHR41251:SF1 2 293 1.2E-117 T 26-04-2016 PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 PIRSF PIRSF006493 1 292 3.3E-106 T 26-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 SUPERFAMILY SSF100939 2 259 1.2E-51 T 26-04-2016 IPR016194 SPOC-like, C-terminal domain PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 PANTHER PTHR41251 2 293 1.2E-117 T 26-04-2016 PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 193 6.1E-35 T 26-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 PAM18_RS14830 ff71d1aea23edeb645baf88b1c7bc64f 293 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 262 7.4E-104 T 26-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type PAM18_RS22465 7f69b47648c762bc3a3b63bf68391601 72 Pfam PF04964 Flp/Fap pilin component 15 63 6.8E-16 T 26-04-2016 IPR007047 Flp/Fap pilin component PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.40.50.300 57 274 3.3E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.30.230.10 281 453 2.5E-35 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PANTHER PTHR32472 1 453 5.1E-218 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 SMART SM00382 88 241 2.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF52540 66 286 2.01E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 2.0E-199 T 26-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 210 238 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 121 138 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 171 195 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 10 34 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 80 108 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 245 271 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 319 342 2.8E-94 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13541 Subunit ChlI of Mg-chelatase 365 427 5.4E-7 T 26-04-2016 PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF54211 252 266 2.73E-40 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF54211 300 452 2.73E-40 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS24035 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13481 AAA domain 68 219 3.6E-14 T 26-04-2016 PAM18_RS19595 f025f610712fe4a4e9baf75dba3b8a99 177 Gene3D G3DSA:3.90.1720.10 41 167 2.2E-43 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS19595 f025f610712fe4a4e9baf75dba3b8a99 177 SUPERFAMILY SSF54001 36 167 3.09E-40 T 26-04-2016 PAM18_RS19595 f025f610712fe4a4e9baf75dba3b8a99 177 Pfam PF00877 NlpC/P60 family 56 164 6.9E-30 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS19595 f025f610712fe4a4e9baf75dba3b8a99 177 PANTHER PTHR21666 41 167 4.7E-40 T 26-04-2016 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 Gene3D G3DSA:1.20.58.410 1 51 1.6E-8 T 26-04-2016 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 SMART SM00937 20 130 1.2E-53 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 180 196 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 PANTHER PTHR11075:SF6 2 298 3.9E-145 T 26-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 Pfam PF00472 RF-1 domain 164 272 2.8E-40 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 298 5.1E-142 T 26-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 Gene3D G3DSA:3.30.160.20 163 240 2.5E-38 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 SUPERFAMILY SSF75620 2 297 3.53E-123 T 26-04-2016 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 PANTHER PTHR11075 2 298 3.9E-145 T 26-04-2016 PAM18_RS06305 f5fd1f6498222e8df37df0a8999b5a62 300 Pfam PF03462 PCRF domain 2 155 5.4E-46 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 Pfam PF05962 HutD 11 181 3.2E-55 T 26-04-2016 IPR010282 Uncharacterised protein family HutD/Ves PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 PANTHER PTHR37943 2 195 1.6E-76 T 26-04-2016 PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 SUPERFAMILY SSF51182 4 190 7.56E-57 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 Gene3D G3DSA:2.60.120.10 110 195 1.9E-40 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 Gene3D G3DSA:2.60.120.10 11 109 2.0E-38 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS26680 4aa02ab7c19907e5a2deeb448be5841e 196 PANTHER PTHR37943:SF1 2 195 1.6E-76 T 26-04-2016 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 SUPERFAMILY SSF51905 11 152 2.86E-26 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 PANTHER PTHR10632 11 405 4.7E-167 T 26-04-2016 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 PANTHER PTHR10632:SF2 11 405 4.7E-167 T 26-04-2016 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 SUPERFAMILY SSF51905 123 266 2.46E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 Gene3D G3DSA:3.50.50.60 12 124 6.9E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 Gene3D G3DSA:3.50.50.60 267 335 6.9E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13865 7635dca022a263e6ea99ecfb379aa3aa 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 132 1.4E-7 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 SUPERFAMILY SSF81333 3 78 1.15E-18 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 Pfam PF00137 ATP synthase subunit C 10 72 3.0E-9 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 26-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 26-04-2016 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.5E-6 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.5E-6 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.5E-6 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 PAM18_RS29065 7bf68f8f528bc902ec655bdd00814742 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.4E-29 T 26-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 PANTHER PTHR23089 5 144 1.2E-43 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 SUPERFAMILY SSF54197 6 142 1.32E-39 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 Gene3D G3DSA:3.30.428.10 6 116 1.3E-37 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 PRINTS PR00332 Histidine triad family signature 12 28 5.6E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 PRINTS PR00332 Histidine triad family signature 33 51 5.6E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 PRINTS PR00332 Histidine triad family signature 101 111 5.6E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 Pfam PF01230 HIT domain 18 115 4.1E-27 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS08585 2ecc86dc94577ffc865d48d3c2dc42c0 145 PANTHER PTHR23089:SF7 5 144 1.2E-43 T 26-04-2016 PAM18_RS17335 44045227293630c4d748d3116dc79390 397 Pfam PF00498 FHA domain 30 96 7.4E-13 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS17335 44045227293630c4d748d3116dc79390 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 386 4.4E-128 T 26-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein PAM18_RS17335 44045227293630c4d748d3116dc79390 397 Gene3D G3DSA:2.60.200.20 26 108 8.2E-14 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS17335 44045227293630c4d748d3116dc79390 397 SUPERFAMILY SSF49879 19 104 2.9E-16 T 26-04-2016 IPR008984 SMAD/FHA domain GO:0005515 PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 PANTHER PTHR30136 8 267 5.2E-147 T 26-04-2016 PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 SUPERFAMILY SSF55781 82 261 1.96E-39 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 Pfam PF01614 Bacterial transcriptional regulator 134 257 2.4E-16 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 Pfam PF09339 IclR helix-turn-helix domain 18 68 2.5E-13 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 PANTHER PTHR30136:SF8 8 267 5.2E-147 T 26-04-2016 PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 SMART SM00346 16 106 6.8E-20 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 SUPERFAMILY SSF46785 16 90 9.39E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 Gene3D G3DSA:3.30.450.40 88 263 1.4E-45 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS15560 fd511121f9888ba87b59a44cb22a2d8e 267 Gene3D G3DSA:1.10.10.10 14 87 1.1E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14170 11c8d824fc3138e9bb5205edf822bd76 485 Gene3D G3DSA:3.30.2010.10 219 312 1.7E-8 T 26-04-2016 PAM18_RS14170 11c8d824fc3138e9bb5205edf822bd76 485 Pfam PF01435 Peptidase family M48 285 450 1.5E-11 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 PANTHER PTHR30212 12 232 1.2E-76 T 26-04-2016 PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 Pfam PF03475 3-alpha domain 171 213 5.5E-15 T 26-04-2016 IPR005163 3-alpha domain PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 PANTHER PTHR30212:SF2 12 232 1.2E-76 T 26-04-2016 PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 Pfam PF03473 MOSC domain 49 160 3.4E-21 T 26-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 Gene3D G3DSA:2.40.33.20 3 230 3.6E-83 T 26-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PAM18_RS02675 ac870f4f66045c100ebef86596e5a038 233 SUPERFAMILY SSF50800 4 225 2.35E-77 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 212 3.8E-47 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.40.1010.10 2 117 7.2E-43 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.30.950.10 118 234 6.7E-38 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 PANTHER PTHR21091 1 232 4.7E-70 T 26-04-2016 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 26-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 SUPERFAMILY SSF53790 1 235 4.58E-71 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 234 4.0E-94 T 26-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS16760 05564e8f930a92ff73b6c9fd340c8918 245 PANTHER PTHR21091:SF16 1 232 4.7E-70 T 26-04-2016 PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 PANTHER PTHR11019 3 52 7.0E-82 T 26-04-2016 PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 PANTHER PTHR11019 72 225 7.0E-82 T 26-04-2016 PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 SUPERFAMILY SSF52317 1 227 1.71E-68 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 PANTHER PTHR11019:SF97 3 52 7.0E-82 T 26-04-2016 PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 PANTHER PTHR11019:SF97 72 225 7.0E-82 T 26-04-2016 PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 Gene3D G3DSA:3.40.50.880 1 227 1.2E-75 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS11585 732bc10b49dd12b8ae018e4fa4b46fe8 228 Pfam PF01965 DJ-1/PfpI family 28 224 2.0E-14 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS06555 d2d4098df539ee5d43544772f6844f96 271 Pfam PF01148 Cytidylyltransferase family 3 264 2.5E-66 T 26-04-2016 PAM18_RS06555 d2d4098df539ee5d43544772f6844f96 271 PANTHER PTHR13773 1 259 9.0E-67 T 26-04-2016 PAM18_RS06555 d2d4098df539ee5d43544772f6844f96 271 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 26-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1045 1067 2.6E-4 T 26-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 Pfam PF00207 Alpha-2-macroglobulin family 857 944 1.4E-23 T 26-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 SMART SM01359 646 792 1.1E-26 T 26-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 SUPERFAMILY SSF48239 1043 1147 3.88E-14 T 26-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 SMART SM01360 857 947 2.1E-26 T 26-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 PANTHER PTHR11412 859 971 1.5E-58 T 26-04-2016 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 PANTHER PTHR11412 327 623 1.5E-58 T 26-04-2016 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 Gene3D G3DSA:1.50.10.20 1044 1124 4.6E-8 T 26-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 647 792 3.4E-10 T 26-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PAM18_RS23395 21ce293a0e4b94c58f53f805f69ebc6d 1516 Pfam PF01835 MG2 domain 332 428 6.7E-19 T 26-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 PAM18_RS26200 79994cd1c8e88959935f79661a837fe1 252 SUPERFAMILY SSF56112 35 242 9.49E-13 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26200 79994cd1c8e88959935f79661a837fe1 252 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 224 2.3E-70 T 26-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PAM18_RS26200 79994cd1c8e88959935f79661a837fe1 252 PIRSF PIRSF026326 3 246 7.8E-68 T 26-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 Pfam PF05175 Methyltransferase small domain 131 252 7.5E-16 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 SUPERFAMILY SSF53335 82 274 2.99E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 PANTHER PTHR18895:SF64 116 293 6.8E-26 T 26-04-2016 PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 PANTHER PTHR18895 116 293 6.8E-26 T 26-04-2016 PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 Gene3D G3DSA:3.40.50.150 129 256 8.8E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14675 27cef896df15c5a915f4e8a295f31575 316 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 Gene3D G3DSA:1.10.10.10 7 89 5.4E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.9E-14 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 PANTHER PTHR30126 8 312 1.7E-190 T 26-04-2016 PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 SUPERFAMILY SSF53850 100 302 7.78E-26 T 26-04-2016 PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 SUPERFAMILY SSF46785 8 93 1.46E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 Pfam PF03466 LysR substrate binding domain 95 297 2.3E-27 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 PANTHER PTHR30126:SF16 8 312 1.7E-190 T 26-04-2016 PAM18_RS01445 ee3c6e5ea2ff735d6d91b593decc17b1 316 Gene3D G3DSA:3.40.190.10 99 199 1.4E-12 T 26-04-2016 PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 1.8E-12 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 Gene3D G3DSA:3.40.30.10 9 85 1.6E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 SUPERFAMILY SSF52833 5 87 1.14E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 PANTHER PTHR11260:SF144 1 203 8.6E-64 T 26-04-2016 PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 Gene3D G3DSA:1.20.1050.10 90 208 1.5E-41 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 PANTHER PTHR11260 1 203 8.6E-64 T 26-04-2016 PAM18_RS22955 1ac336db0843cfb217dbed25e4747290 211 SUPERFAMILY SSF47616 84 201 2.52E-13 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS07890 c33d5ba4beb8db643a031949eb5038ce 259 PANTHER PTHR10672 1 258 9.9E-113 T 26-04-2016 PAM18_RS07890 c33d5ba4beb8db643a031949eb5038ce 259 SMART SM01007 24 203 4.8E-56 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS07890 c33d5ba4beb8db643a031949eb5038ce 259 Gene3D G3DSA:3.40.225.10 19 228 2.1E-58 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS07890 c33d5ba4beb8db643a031949eb5038ce 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 203 3.8E-43 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS07890 c33d5ba4beb8db643a031949eb5038ce 259 SUPERFAMILY SSF53639 19 220 2.55E-57 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:3.30.565.10 286 430 7.9E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00387 320 432 1.3E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 PANTHER PTHR24423 162 430 9.7E-59 T 26-04-2016 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 5.2E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 278 6.5E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:1.10.287.130 212 277 4.1E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 430 2.7E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF55874 284 431 2.49E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF47384 206 279 5.1E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00672 HAMP domain 150 217 1.6E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00388 222 282 5.6E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS27185 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00304 168 221 1.3E-4 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 SMART SM00387 123 214 5.2E-6 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 Pfam PF07730 Histidine kinase 22 85 5.9E-9 T 26-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 Gene3D G3DSA:3.30.565.10 111 214 8.7E-11 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 PANTHER PTHR24421:SF1 15 214 7.0E-43 T 26-04-2016 PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 126 211 6.1E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 SUPERFAMILY SSF55874 92 212 6.16E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15715 5c5345f5ea11e6df0ff08d81a40fa873 216 PANTHER PTHR24421 15 214 7.0E-43 T 26-04-2016 PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 3.0E-104 T 26-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 3.9E-75 T 26-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 1.6E-90 T 26-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 SUPERFAMILY SSF51182 1 178 8.22E-80 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 PANTHER PTHR21047 1 177 4.6E-79 T 26-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PAM18_RS27005 34b6027f1b23a28c1e1df4695e252968 181 Gene3D G3DSA:2.60.120.10 1 178 1.1E-83 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 455 4.0E-179 T 26-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 PANTHER PTHR32328 5 466 2.0E-213 T 26-04-2016 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 Pfam PF03841 L-seryl-tRNA selenium transferase 79 450 5.3E-170 T 26-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 Gene3D G3DSA:3.40.640.10 134 313 9.2E-30 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 Pfam PF12390 Selenocysteine synthase N terminal 5 42 1.4E-8 T 26-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 SUPERFAMILY SSF53383 74 375 4.96E-43 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 466 239.812 T 26-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 PAM18_RS25175 e4456f85db9de5d9a296c1276a547959 468 PANTHER PTHR32328:SF0 5 466 2.0E-213 T 26-04-2016 PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 Pfam PF13378 Enolase C-terminal domain-like 166 374 1.0E-31 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 SUPERFAMILY SSF54826 1 136 2.92E-26 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 44 133 3.2E-5 T 26-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 PANTHER PTHR13794:SF58 1 374 2.2E-98 T 26-04-2016 PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 Gene3D G3DSA:3.30.390.10 1 120 3.5E-37 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 Gene3D G3DSA:3.20.20.120 121 376 4.5E-49 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 SMART SM00922 162 259 6.2E-13 T 26-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 SUPERFAMILY SSF51604 122 376 7.53E-44 T 26-04-2016 IPR029065 Enolase C-terminal domain-like PAM18_RS04575 2bef22252b2725dbafec5c59b797d718 389 PANTHER PTHR13794 1 374 2.2E-98 T 26-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 Gene3D G3DSA:3.30.1320.10 1 78 1.5E-32 T 26-04-2016 IPR023803 Ribosomal protein S16 domain PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.7E-28 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 PANTHER PTHR12919 1 78 7.8E-40 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 SUPERFAMILY SSF54565 1 78 1.22E-28 T 26-04-2016 IPR023803 Ribosomal protein S16 domain PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 Pfam PF00886 Ribosomal protein S16 8 68 1.8E-24 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06080 6fe16d27711c6026fc134ccce6e6487b 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.896 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:3.40.50.300 151 324 7.1E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:1.10.10.60 374 448 7.5E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Pfam PF00072 Response regulator receiver domain 13 122 7.8E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 SMART SM00448 11 122 4.4E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:1.10.8.60 325 373 8.3E-20 T 26-04-2016 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF46689 397 448 1.79E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 PANTHER PTHR32071 1 459 0.0 T 26-04-2016 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF52172 12 197 1.08E-42 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 SMART SM00382 172 315 1.9E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 SUPERFAMILY SSF52540 152 381 6.84E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Pfam PF00158 Sigma-54 interaction domain 152 318 6.1E-67 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 8.8E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 Gene3D G3DSA:3.40.50.2300 10 134 1.2E-34 T 26-04-2016 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 PANTHER PTHR32071:SF40 1 459 0.0 T 26-04-2016 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 5.8E-5 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS27015 ac14cd080f013b60b76030f28483892f 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 5.8E-5 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS16320 1fb49a334aa4a6f555a158defbaa4122 307 PIRSF PIRSF016660 1 304 2.4E-124 T 26-04-2016 IPR008526 Inner membrane protein YedI PAM18_RS16320 1fb49a334aa4a6f555a158defbaa4122 307 Gene3D G3DSA:1.20.5.510 270 294 1.6E-5 T 26-04-2016 PAM18_RS16320 1fb49a334aa4a6f555a158defbaa4122 307 PANTHER PTHR30503 2 299 1.6E-107 T 26-04-2016 PAM18_RS16320 1fb49a334aa4a6f555a158defbaa4122 307 Pfam PF05661 Protein of unknown function (DUF808) 4 292 5.7E-118 T 26-04-2016 IPR008526 Inner membrane protein YedI PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 SUPERFAMILY SSF53850 90 297 2.17E-47 T 26-04-2016 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:1.10.10.10 2 82 3.7E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:3.40.190.10 180 261 5.3E-9 T 26-04-2016 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 SUPERFAMILY SSF46785 3 113 5.45E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:3.40.190.10 93 179 4.8E-29 T 26-04-2016 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 PANTHER PTHR30537:SF5 1 300 7.0E-124 T 26-04-2016 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.8E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 PANTHER PTHR30537 1 300 7.0E-124 T 26-04-2016 PAM18_RS13390 3276a700633affdb8ef037f42fe01c2e 304 Pfam PF03466 LysR substrate binding domain 91 296 1.4E-47 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PIRSF PIRSF006276 1 144 1.9E-48 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PANTHER PTHR31964 1 141 1.1E-32 T 26-04-2016 PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 Pfam PF00582 Universal stress protein family 3 141 1.3E-33 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 Gene3D G3DSA:3.40.50.620 3 144 6.8E-40 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PANTHER PTHR31964:SF42 1 141 1.1E-32 T 26-04-2016 PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 SUPERFAMILY SSF52402 3 141 1.93E-36 T 26-04-2016 PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 3 21 4.6E-14 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 102 114 4.6E-14 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS09985 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 119 141 4.6E-14 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS13955 f45f6f584c4d70c497c9b34e8b99bfd6 254 PANTHER PTHR30151:SF7 2 251 3.7E-104 T 26-04-2016 PAM18_RS13955 f45f6f584c4d70c497c9b34e8b99bfd6 254 PANTHER PTHR30151 2 251 3.7E-104 T 26-04-2016 PAM18_RS13955 f45f6f584c4d70c497c9b34e8b99bfd6 254 SUPERFAMILY SSF161098 56 239 1.7E-29 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13955 f45f6f584c4d70c497c9b34e8b99bfd6 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 246 5.2E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13955 f45f6f584c4d70c497c9b34e8b99bfd6 254 Gene3D G3DSA:1.10.3720.10 54 248 5.8E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 345.024 T 26-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 PIRSF PIRSF006288 12 892 0.0 T 26-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 SUPERFAMILY SSF81593 205 314 1.41E-12 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Pfam PF01842 ACT domain 816 873 1.5E-7 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 885 0.0 T 26-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 PANTHER PTHR13734 104 698 3.5E-141 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 PANTHER PTHR13734:SF45 104 698 3.5E-141 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Pfam PF01909 Nucleotidyltransferase domain 72 114 1.0E-7 T 26-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Gene3D G3DSA:3.30.70.260 816 870 2.6E-10 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 SUPERFAMILY SSF55021 813 879 6.66E-11 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Gene3D G3DSA:3.30.460.10 62 173 9.2E-17 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Pfam PF01966 HD domain 463 569 2.0E-10 T 26-04-2016 IPR006674 HD domain PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 SUPERFAMILY SSF109604 426 591 1.07E-13 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Gene3D G3DSA:1.10.3210.10 431 620 7.1E-24 T 26-04-2016 IPR006674 HD domain PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 SMART SM00471 457 604 1.7E-9 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 SUPERFAMILY SSF81301 8 181 3.0E-24 T 26-04-2016 PAM18_RS06520 a3996c0f4ed6255b5b73ef0d36b90b05 900 Pfam PF08335 GlnD PII-uridylyltransferase 185 323 5.2E-37 T 26-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 Gene3D G3DSA:1.10.443.10 162 321 6.0E-36 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 PANTHER PTHR30349:SF20 99 321 9.9E-42 T 26-04-2016 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 Gene3D G3DSA:1.10.150.130 62 155 3.9E-5 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 SUPERFAMILY SSF56349 60 320 1.0E-43 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 PANTHER PTHR30349 99 321 9.9E-42 T 26-04-2016 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 Pfam PF00589 Phage integrase family 163 241 2.0E-8 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS22015 fe2e424a1eca50f6b49e9a47154bf395 330 Pfam PF00589 Phage integrase family 271 312 8.4E-11 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 363 6.3E-24 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 1.2E-20 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 PANTHER PTHR11649:SF5 1 453 9.4E-148 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 373 453 4.4E-25 T 26-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Hamap MF_00195 GTPase Der [der]. 2 456 38.055 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.40.50.300 3 169 2.1E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.40.50.300 194 380 3.1E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 453 1.1E-173 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Gene3D G3DSA:3.30.300.20 381 454 2.3E-21 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 PANTHER PTHR11649 1 453 9.4E-148 T 26-04-2016 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 SUPERFAMILY SSF52540 4 168 7.72E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-10 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 4.4E-10 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 PIRSF PIRSF006485 1 461 2.3E-171 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 SUPERFAMILY SSF52540 195 459 4.09E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 SUPERFAMILY SSF52540 137 166 4.09E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Pfam PF01926 50S ribosome-binding GTPase 199 317 2.5E-24 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS05780 437b8899cbaf125cb63f2250795bf699 493 Pfam PF01926 50S ribosome-binding GTPase 5 119 3.8E-28 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Pfam PF00069 Protein kinase domain 160 351 5.2E-18 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Gene3D G3DSA:3.40.50.300 1777 1916 4.9E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 SUPERFAMILY SSF56112 158 360 1.16E-30 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Pfam PF13087 AAA domain 1721 1916 4.4E-22 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Pfam PF13245 Part of AAA domain 958 1014 3.7E-10 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Gene3D G3DSA:3.40.50.300 1629 1671 1.6E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Gene3D G3DSA:3.40.50.300 1711 1752 1.6E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Gene3D G3DSA:3.40.50.300 933 1060 1.6E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Pfam PF13195 Protein of unknown function (DUF4011) 741 831 3.7E-9 T 26-04-2016 IPR025103 Protein of unknown function DUF4011 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 SMART SM00220 129 355 7.9E-9 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 SUPERFAMILY SSF52540 952 1017 4.89E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 SUPERFAMILY SSF52540 1582 1678 4.89E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 SUPERFAMILY SSF52540 1723 1963 4.89E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362:SF160 1852 2044 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362:SF160 101 447 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362:SF160 902 1098 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362 1852 2044 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362 101 447 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 PANTHER PTHR24362 902 1098 1.5E-68 T 26-04-2016 PAM18_RS11545 5735a1461d8197efba42a24e87c7c12a 2098 Gene3D G3DSA:1.10.510.10 203 371 2.1E-25 T 26-04-2016 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 SUPERFAMILY SSF53720 15 483 3.67E-148 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 PANTHER PTHR11699:SF203 1 489 1.3E-298 T 26-04-2016 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 PANTHER PTHR11699 1 489 1.3E-298 T 26-04-2016 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 Pfam PF00171 Aldehyde dehydrogenase family 18 475 7.1E-152 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 Gene3D G3DSA:3.40.605.10 15 271 1.1E-76 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS25640 31a1e51dcb2a25afdf900d7ccbb3ae29 489 Gene3D G3DSA:3.40.309.10 272 454 9.0E-64 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 PANTHER PTHR21011 1 134 1.8E-41 T 26-04-2016 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.0E-34 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 Pfam PF01250 Ribosomal protein S6 3 91 5.2E-27 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 26-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 PANTHER PTHR21011:SF1 1 134 1.8E-41 T 26-04-2016 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 Gene3D G3DSA:3.30.70.60 1 103 9.3E-41 T 26-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 SUPERFAMILY SSF54995 1 102 9.55E-37 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS25820 aad12833c84219f04c4381299e84a50b 139 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.601 T 26-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PAM18_RS00990 25527ddf6c1c6f388c2e050e20567018 102 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 1.5E-35 T 26-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 PAM18_RS00990 25527ddf6c1c6f388c2e050e20567018 102 PANTHER PTHR10160 10 94 1.3E-31 T 26-04-2016 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:1.10.10.10 134 221 2.7E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 SUPERFAMILY SSF52172 3 180 6.83E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00862 146 220 6.7E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 PANTHER PTHR26402 3 221 2.5E-103 T 26-04-2016 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00448 3 114 3.1E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.8E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 PANTHER PTHR26402:SF547 3 221 2.5E-103 T 26-04-2016 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:3.40.50.2300 2 133 6.0E-39 T 26-04-2016 PAM18_RS09695 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00072 Response regulator receiver domain 5 114 3.5E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 PANTHER PTHR10366:SF253 319 661 1.7E-185 T 26-04-2016 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 SUPERFAMILY SSF53328 5 204 1.83E-54 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Gene3D G3DSA:3.40.50.720 315 554 7.7E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 SUPERFAMILY SSF50486 207 300 6.75E-21 T 26-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Gene3D G3DSA:3.10.25.10 206 307 1.1E-18 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Pfam PF00551 Formyl transferase 28 175 5.3E-26 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Pfam PF02911 Formyl transferase, C-terminal domain 204 279 1.6E-15 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Gene3D G3DSA:3.40.50.170 5 201 8.0E-51 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 SUPERFAMILY SSF51735 319 652 8.2E-71 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Pfam PF01370 NAD dependent epimerase/dehydratase family 320 567 9.3E-44 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 3 661 61.312 T 26-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 PANTHER PTHR10366 319 661 1.7E-185 T 26-04-2016 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 PIRSF PIRSF036506 3 661 0.0 T 26-04-2016 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30|UniPathway: UPA00030|UniPathway: UPA00032|UniPathway: UPA00032 PAM18_RS07375 324b4e6c13aff38a6b59b77b01d70cce 662 Gene3D G3DSA:3.90.25.10 571 642 3.1E-42 T 26-04-2016 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 12 636 41.846 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PANTHER PTHR11482 443 601 9.8E-259 T 26-04-2016 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PANTHER PTHR11482 1 373 9.8E-259 T 26-04-2016 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 14 636 3.9E-276 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF50621 459 567 1.81E-6 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 356 565 1.9E-25 T 26-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 282 297 - T 26-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF51419 75 352 1.23E-67 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 107 125 - T 26-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 130 142 2.4E-16 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.4E-16 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.4E-16 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 2.4E-16 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 125 2.4E-16 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 351 3.9E-45 T 26-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PANTHER PTHR11482:SF36 443 601 9.8E-259 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PANTHER PTHR11482:SF36 1 373 9.8E-259 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:2.40.37.10 339 363 1.1E-14 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:2.40.37.10 459 591 1.1E-14 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 153 168 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 179 200 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 75 90 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 99 113 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 493 518 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 203 225 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 330 347 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 468 489 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 546 567 5.1E-69 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 PIRSF PIRSF001336 1 636 4.2E-250 T 26-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 PAM18_RS25340 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:3.20.20.10 77 338 2.0E-58 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 3.9E-116 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 SUPERFAMILY SSF53671 2 300 1.07E-103 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 141 286 3.4E-59 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-29 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-29 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-29 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-29 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-29 T 26-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 5.2E-27 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.2E-27 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.2E-27 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 5.2E-27 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.575 T 26-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PANTHER PTHR11405 1 300 4.0E-141 T 26-04-2016 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 8.1E-50 T 26-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 9.7E-47 T 26-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 PANTHER PTHR11405:SF1 1 300 4.0E-141 T 26-04-2016 PAM18_RS07460 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 2 140 1.3E-52 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF53850 97 302 1.78E-38 T 26-04-2016 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.1E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.1E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.1E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 PANTHER PTHR30346:SF9 5 299 3.1E-203 T 26-04-2016 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 99 183 4.2E-17 T 26-04-2016 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 PANTHER PTHR30346 5 299 3.1E-203 T 26-04-2016 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 184 265 8.1E-15 T 26-04-2016 PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:1.10.10.10 7 93 3.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF46785 5 116 5.69E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 Pfam PF03466 LysR substrate binding domain 95 301 2.2E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13235 07ff96bb647b7b315ea579d461637721 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.0E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 26-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.30.300.30 515 627 3.2E-26 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 SUPERFAMILY SSF56801 11 637 2.09E-185 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF00501 AMP-binding enzyme 83 519 9.7E-89 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.40.50.980 78 263 1.1E-44 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:2.30.38.10 436 512 6.3E-6 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 54.0 T 26-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.40.50.980 264 421 3.7E-29 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 PANTHER PTHR24095 3 642 0.0 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 PANTHER PTHR24095:SF178 3 642 0.0 T 26-04-2016 PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 4.6E-24 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS24785 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 1.1E-21 T 26-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PAM18_RS24175 fc722838f4533248afced06ee678610b 87 Pfam PF09413 Putative prokaryotic signal transducing protein 1 63 1.4E-12 T 26-04-2016 IPR018551 Domain of unknown function DUF2007 PAM18_RS24175 fc722838f4533248afced06ee678610b 87 SUPERFAMILY SSF54913 1 68 2.89E-5 T 26-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 Gene3D G3DSA:3.30.950.10 425 537 2.0E-10 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 Pfam PF11760 Cobalamin synthesis G N-terminal 52 130 6.3E-23 T 26-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 310 556 9.5E-85 T 26-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 Gene3D G3DSA:3.40.1010.10 308 424 6.0E-29 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 PANTHER PTHR21091:SF9 276 476 2.3E-42 T 26-04-2016 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 PANTHER PTHR21091:SF9 40 58 2.3E-42 T 26-04-2016 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 SUPERFAMILY SSF159672 8 212 1.31E-41 T 26-04-2016 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 PANTHER PTHR21091 40 58 2.3E-42 T 26-04-2016 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 309 520 1.5E-32 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 PANTHER PTHR21091 276 476 2.3E-42 T 26-04-2016 PAM18_RS10565 0473e3a2480eed51ac15dc4e2b561ff1 559 SUPERFAMILY SSF53790 307 556 5.1E-53 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 SMART SM00422 11 80 1.8E-22 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 PANTHER PTHR30204:SF19 3 245 2.7E-110 T 26-04-2016 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 Gene3D G3DSA:1.10.1660.10 12 117 4.2E-23 T 26-04-2016 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 PANTHER PTHR30204 3 245 2.7E-110 T 26-04-2016 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 Pfam PF13411 MerR HTH family regulatory protein 12 78 8.3E-18 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS24300 a521e1aeec820e44d08d80d06aba4c70 299 SUPERFAMILY SSF46955 12 109 8.24E-21 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 SUPERFAMILY SSF48008 70 200 2.22E-18 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 Pfam PF07729 FCD domain 74 191 9.9E-15 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 SMART SM00345 7 64 2.7E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 PANTHER PTHR11751:SF362 1 90 1.5E-15 T 26-04-2016 PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 SMART SM00895 74 192 8.5E-7 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 Gene3D G3DSA:1.20.120.530 68 203 1.0E-19 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 SUPERFAMILY SSF46785 2 68 2.38E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 PANTHER PTHR11751 1 90 1.5E-15 T 26-04-2016 PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 62 2.0E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS11140 ad19fdebc9fbc733e0eeffded0709f73 218 Gene3D G3DSA:1.10.10.10 5 65 2.2E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 458 2.3E-55 T 26-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 Gene3D G3DSA:1.10.45.10 419 458 1.4E-10 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 SUPERFAMILY SSF55103 190 459 1.14E-45 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 Pfam PF01565 FAD binding domain 42 175 8.7E-33 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 Gene3D G3DSA:3.30.465.10 94 214 4.9E-31 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 PANTHER PTHR11748:SF76 1 460 2.5E-212 T 26-04-2016 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 Gene3D G3DSA:3.30.43.10 3 93 9.0E-14 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 SUPERFAMILY SSF56176 5 213 1.31E-55 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS19005 b755adb212ddeadaa42bbc49a8397a95 460 PANTHER PTHR11748 1 460 2.5E-212 T 26-04-2016 PAM18_RS21620 0e4223877254566a79a9d482472825c4 146 Gene3D G3DSA:3.10.180.10 9 141 1.3E-23 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21620 0e4223877254566a79a9d482472825c4 146 PANTHER PTHR34109:SF3 2 145 1.6E-81 T 26-04-2016 PAM18_RS21620 0e4223877254566a79a9d482472825c4 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 139 1.4E-6 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS21620 0e4223877254566a79a9d482472825c4 146 SUPERFAMILY SSF54593 15 145 5.24E-23 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21620 0e4223877254566a79a9d482472825c4 146 PANTHER PTHR34109 2 145 1.6E-81 T 26-04-2016 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 Pfam PF01715 IPP transferase 41 297 4.9E-87 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 Gene3D G3DSA:1.10.287.890 213 295 2.0E-34 T 26-04-2016 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 303 5.8E-102 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 314 29.932 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 Gene3D G3DSA:3.40.50.300 5 171 5.2E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 PANTHER PTHR11088 5 310 6.6E-119 T 26-04-2016 PAM18_RS25880 4eaf172dadb91f056d6e9e45dd84cb9e 323 SUPERFAMILY SSF52540 8 152 2.5E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05220 d006d07128f2a0d2e842b13b72ca0628 296 Pfam PF01136 Peptidase family U32 83 264 1.3E-11 T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS05220 d006d07128f2a0d2e842b13b72ca0628 296 PANTHER PTHR30217:SF8 1 282 3.5E-95 T 26-04-2016 PAM18_RS05220 d006d07128f2a0d2e842b13b72ca0628 296 PANTHER PTHR30217 1 282 3.5E-95 T 26-04-2016 PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 SUPERFAMILY SSF51735 27 278 3.66E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 PANTHER PTHR24320 8 314 1.1E-90 T 26-04-2016 PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 Pfam PF00106 short chain dehydrogenase 30 224 1.8E-22 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 1.1E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 1.1E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.1E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05945 ca874887b62873b8fa4ccbf199931deb 320 Gene3D G3DSA:3.40.50.720 27 263 2.7E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.2E-120 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 SUPERFAMILY SSF53901 3 274 1.87E-65 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 PIRSF PIRSF000429 1 401 3.6E-121 T 26-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.3E-42 T 26-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 26-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Pfam PF00108 Thiolase, N-terminal domain 5 265 1.8E-60 T 26-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 26-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 SUPERFAMILY SSF53901 276 399 1.43E-41 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 PANTHER PTHR18919 1 401 1.1E-221 T 26-04-2016 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 26-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Gene3D G3DSA:3.40.47.10 151 198 3.8E-55 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Gene3D G3DSA:3.40.47.10 282 399 3.8E-55 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 PANTHER PTHR18919:SF91 1 401 1.1E-221 T 26-04-2016 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Gene3D G3DSA:3.40.47.10 3 124 2.8E-58 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07185 f8ffc85af5c088a18ddc528b1a6792f4 401 Gene3D G3DSA:3.40.47.10 199 281 2.8E-58 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 148 4.6E-55 T 26-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 Gene3D G3DSA:3.30.700.10 19 90 1.3E-12 T 26-04-2016 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.1E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 PANTHER PTHR30093:SF9 14 148 7.6E-62 T 26-04-2016 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 3.1E-16 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 3.1E-16 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 PANTHER PTHR30093 14 148 7.6E-62 T 26-04-2016 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 SUPERFAMILY SSF54523 45 147 2.09E-34 T 26-04-2016 PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 14 38 2.8E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22250 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF08334 Type II secretion system (T2SS), protein G 41 147 3.9E-40 T 26-04-2016 IPR013545 Type II secretion system protein G PAM18_RS05800 b06bd4fdd0f7cd188b2b9187a5f81780 316 PANTHER PTHR11732:SF132 1 313 3.6E-211 T 26-04-2016 PAM18_RS05800 b06bd4fdd0f7cd188b2b9187a5f81780 316 PANTHER PTHR11732 1 313 3.6E-211 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS05800 b06bd4fdd0f7cd188b2b9187a5f81780 316 Pfam PF00248 Aldo/keto reductase family 16 313 4.3E-69 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS05800 b06bd4fdd0f7cd188b2b9187a5f81780 316 SUPERFAMILY SSF51430 1 313 2.62E-95 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS05800 b06bd4fdd0f7cd188b2b9187a5f81780 316 Gene3D G3DSA:3.20.20.100 1 313 1.2E-95 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 Gene3D G3DSA:1.10.287.1040 4 75 5.4E-28 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 PANTHER PTHR34137 1 80 9.5E-24 T 26-04-2016 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 16.08 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 7.4E-22 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 SUPERFAMILY SSF116842 3 68 4.18E-21 T 26-04-2016 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 Pfam PF02609 Exonuclease VII small subunit 9 60 4.2E-20 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 PIRSF PIRSF006488 1 80 1.4E-22 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS04570 0a030669a35e46e003bf4ac3b8c9380a 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 2.0E-11 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PAM18_RS17715 465afdbc04a92fa4b8d6c007c775132f 437 Pfam PF05525 Branched-chain amino acid transport protein 8 427 5.8E-161 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS17715 465afdbc04a92fa4b8d6c007c775132f 437 PANTHER PTHR30588:SF0 1 437 1.2E-219 T 26-04-2016 PAM18_RS17715 465afdbc04a92fa4b8d6c007c775132f 437 PANTHER PTHR30588 1 437 1.2E-219 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS17715 465afdbc04a92fa4b8d6c007c775132f 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 4.9E-165 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 152 675 2.5E-108 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 SUPERFAMILY SSF54665 7 147 8.5E-33 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 435 567 2.8E-25 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 171 276 3.7E-32 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 SMART SM01008 22 136 2.3E-35 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 SUPERFAMILY SSF56003 136 733 1.28E-158 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 124 170 2.5E-6 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 278 312 2.5E-6 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 PANTHER PTHR11908 9 733 0.0 T 26-04-2016 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.90.1170.50 8 123 1.6E-30 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 PANTHER PTHR11908:SF71 9 733 0.0 T 26-04-2016 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 135 1.4E-16 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 592 732 8.1E-55 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS15925 e30cd3e160204ea347e293fe8477e66e 734 Gene3D G3DSA:3.30.365.10 351 434 8.1E-55 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 Gene3D G3DSA:1.10.10.60 251 299 3.5E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PANTHER PTHR11019 128 302 2.2E-155 T 26-04-2016 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PANTHER PTHR11019 30 110 2.2E-155 T 26-04-2016 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF51182 27 81 9.49E-8 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF46689 249 298 7.62E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 Gene3D G3DSA:1.10.10.60 195 250 9.2E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 Pfam PF12833 Helix-turn-helix domain 219 298 1.3E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PANTHER PTHR11019:SF132 128 302 2.2E-155 T 26-04-2016 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PANTHER PTHR11019:SF132 30 110 2.2E-155 T 26-04-2016 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 SMART SM00342 213 296 5.6E-31 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 SUPERFAMILY SSF46689 196 245 9.43E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 Gene3D G3DSA:2.60.120.280 33 179 1.9E-10 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS02850 0177f42c8772bda414a74df806b64f50 303 Pfam PF02311 AraC-like ligand binding domain 17 173 3.6E-37 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 30.989 T 26-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 PANTHER PTHR10204:SF37 1 195 1.4E-100 T 26-04-2016 PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 PANTHER PTHR10204 1 195 1.4E-100 T 26-04-2016 PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Pfam PF02525 Flavodoxin-like fold 1 196 4.8E-47 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 SUPERFAMILY SSF52218 1 199 5.53E-54 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS15805 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Gene3D G3DSA:3.40.50.360 1 196 4.9E-62 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 PANTHER PTHR10108 209 244 4.5E-102 T 26-04-2016 PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 PANTHER PTHR10108 25 178 4.5E-102 T 26-04-2016 PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 Gene3D G3DSA:3.40.50.150 39 160 7.3E-24 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 Gene3D G3DSA:3.40.50.150 207 244 7.3E-24 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 SUPERFAMILY SSF53335 31 248 5.89E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 PANTHER PTHR10108:SF868 209 244 4.5E-102 T 26-04-2016 PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 PANTHER PTHR10108:SF868 25 178 4.5E-102 T 26-04-2016 PAM18_RS13285 54c6950a737ab91b3d5dcd382349b3ad 283 Pfam PF13649 Methyltransferase domain 55 151 3.6E-11 T 26-04-2016 PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 Pfam PF00106 short chain dehydrogenase 5 194 7.9E-35 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 Gene3D G3DSA:3.40.50.720 3 220 6.0E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PANTHER PTHR24322 9 137 1.5E-56 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PANTHER PTHR24322 153 185 1.5E-56 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 SUPERFAMILY SSF51735 4 228 3.51E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PANTHER PTHR24322:SF360 9 137 1.5E-56 T 26-04-2016 PAM18_RS00595 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PANTHER PTHR24322:SF360 153 185 1.5E-56 T 26-04-2016 PAM18_RS17240 4946816ba9149f85a011cc6e84ad9e68 181 SUPERFAMILY SSF51182 1 179 4.86E-42 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS17240 4946816ba9149f85a011cc6e84ad9e68 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 39.744 T 26-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 PAM18_RS17240 4946816ba9149f85a011cc6e84ad9e68 181 Gene3D G3DSA:2.60.120.10 4 177 2.2E-57 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS17240 4946816ba9149f85a011cc6e84ad9e68 181 Pfam PF03079 ARD/ARD' family 6 165 8.2E-36 T 26-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 PAM18_RS17240 4946816ba9149f85a011cc6e84ad9e68 181 PANTHER PTHR23418 29 181 1.1E-37 T 26-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 SMART SM00829 10 324 6.9E-58 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 Gene3D G3DSA:3.90.180.10 1 144 1.6E-47 T 26-04-2016 IPR011032 GroES-like PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 PANTHER PTHR11695:SF28 15 325 1.7E-128 T 26-04-2016 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 Gene3D G3DSA:3.40.50.720 145 262 3.7E-28 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 6.6E-144 T 26-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.1E-9 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 Pfam PF13602 Zinc-binding dehydrogenase 184 324 4.4E-26 T 26-04-2016 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 PANTHER PTHR11695 15 325 1.7E-128 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 SUPERFAMILY SSF51735 111 288 1.27E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS19895 fa6bf21dc554bba3b7555faf8de0075f 328 SUPERFAMILY SSF50129 1 140 6.7E-39 T 26-04-2016 IPR011032 GroES-like PAM18_RS01795 abae769a25213d5531f66c93c6fd0fa3 292 SUPERFAMILY SSF109604 13 281 3.32E-65 T 26-04-2016 PAM18_RS01795 abae769a25213d5531f66c93c6fd0fa3 292 Pfam PF08668 HDOD domain 20 213 2.2E-54 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS01795 abae769a25213d5531f66c93c6fd0fa3 292 PANTHER PTHR33525:SF3 2 261 3.7E-58 T 26-04-2016 PAM18_RS01795 abae769a25213d5531f66c93c6fd0fa3 292 PANTHER PTHR33525 2 261 3.7E-58 T 26-04-2016 PAM18_RS01795 abae769a25213d5531f66c93c6fd0fa3 292 Gene3D G3DSA:1.10.3150.10 4 280 8.5E-76 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 PIRSF PIRSF002122 2 156 2.1E-59 T 26-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 26-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 PANTHER PTHR11205 1 156 1.3E-88 T 26-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 8.4E-68 T 26-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.331 T 26-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 SUPERFAMILY SSF47973 6 149 7.72E-60 T 26-04-2016 IPR023798 Ribosomal protein S7 domain PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 Gene3D G3DSA:1.10.455.10 8 156 1.7E-65 T 26-04-2016 IPR023798 Ribosomal protein S7 domain PAM18_RS03405 9b9df0300477dc738c38223795cda693 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.7E-67 T 26-04-2016 IPR023798 Ribosomal protein S7 domain PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 PANTHER PTHR11699 1 495 4.2E-246 T 26-04-2016 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 SUPERFAMILY SSF53720 13 493 8.64E-171 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 Gene3D G3DSA:3.40.605.10 16 279 1.7E-98 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 Pfam PF00171 Aldehyde dehydrogenase family 32 491 1.5E-174 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 Gene3D G3DSA:3.40.309.10 280 466 4.6E-70 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS04415 7adfa19ed473c5cd84ac41b4d5b5de0a 495 PANTHER PTHR11699:SF46 1 495 4.2E-246 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 146 795 7.0E-110 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 Pfam PF00593 TonB dependent receptor 552 793 2.3E-37 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 778 795 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 PANTHER PTHR32552:SF6 60 120 0.0 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 PANTHER PTHR32552:SF6 136 795 0.0 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 SUPERFAMILY SSF56935 112 795 4.58E-126 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 PANTHER PTHR32552 60 120 0.0 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 PANTHER PTHR32552 136 795 0.0 T 26-04-2016 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 242 3.3E-16 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 Gene3D G3DSA:2.40.170.20 269 795 5.4E-147 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 Gene3D G3DSA:2.170.130.10 110 251 1.6E-30 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 Pfam PF07660 Secretin and TonB N terminus short domain 58 106 1.7E-7 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS00765 7d11e83543c0ec817d4a62304109bfeb 795 SMART SM00965 56 107 1.4E-10 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS04305 33151c02a44e932a74d3c3e20c1c5d54 177 Gene3D G3DSA:2.60.120.10 31 174 2.4E-49 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS04305 33151c02a44e932a74d3c3e20c1c5d54 177 SUPERFAMILY SSF51182 36 159 1.39E-22 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS04305 33151c02a44e932a74d3c3e20c1c5d54 177 Pfam PF07883 Cupin domain 75 131 4.1E-7 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 Pfam PF00892 EamA-like transporter family 153 285 9.6E-26 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 Pfam PF00892 EamA-like transporter family 9 139 1.5E-26 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 SUPERFAMILY SSF103481 42 142 6.41E-18 T 26-04-2016 PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 PANTHER PTHR12715 1 293 2.2E-89 T 26-04-2016 PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 PANTHER PTHR12715:SF11 1 293 2.2E-89 T 26-04-2016 PAM18_RS20345 a7c5b58ff80e67625684daade06fead7 301 SUPERFAMILY SSF103481 190 291 3.01E-15 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 181 5.7E-14 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 SUPERFAMILY SSF56935 56 790 3.41E-117 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552:SF33 672 790 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552:SF33 492 655 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552:SF33 1 476 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 773 790 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552 672 790 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552 492 655 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 PANTHER PTHR32552 1 476 0.0 T 26-04-2016 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 Gene3D G3DSA:2.170.130.10 54 190 1.1E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS00970 f76e03acbff92cbdb94f5f70a5d0a9da 790 Gene3D G3DSA:2.40.170.20 191 790 1.8E-86 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:3.30.460.10 37 187 1.2E-49 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81891 186 421 1.29E-50 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 PANTHER PTHR13734 5 278 1.1E-126 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 446 2.8E-44 T 26-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 457 2.9E-184 T 26-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81301 29 185 2.4E-39 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 13 459 38.005 T 26-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 215 277 8.5E-21 T 26-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:1.10.3090.10 188 421 1.6E-52 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 PANTHER PTHR13734:SF47 5 278 1.1E-126 T 26-04-2016 PAM18_RS24755 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF01743 Poly A polymerase head domain 56 188 7.3E-38 T 26-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 2.0E-27 T 26-04-2016 PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 SUPERFAMILY SSF81301 1 111 1.8E-40 T 26-04-2016 PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.1E-38 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 26.278 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 Gene3D G3DSA:3.30.460.10 2 107 5.4E-40 T 26-04-2016 PAM18_RS04755 1cbeda8330dfe7533a512b881be45cd1 118 PANTHER PTHR21043 1 107 8.8E-46 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.561 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 3.3E-157 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PANTHER PTHR22855 1 314 5.2E-129 T 26-04-2016 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.1E-64 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 Gene3D G3DSA:3.90.226.10 58 271 1.9E-47 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PANTHER PTHR22855:SF42 1 314 5.2E-129 T 26-04-2016 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 SUPERFAMILY SSF52096 5 314 5.16E-104 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS06615 ee1388be81814629b6ab38d8772162ca 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.2E-47 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 PANTHER PTHR30329 1 264 1.3E-91 T 26-04-2016 PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 SUPERFAMILY SSF103088 127 240 1.7E-30 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 7.2E-22 T 26-04-2016 IPR025713 Motility protein B, N-terminal domain PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 Gene3D G3DSA:3.30.1330.60 116 240 2.5E-30 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF00691 OmpA family 145 234 2.7E-17 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS18780 15704a0f5adf481eb987eb14fe23d700 296 PANTHER PTHR30329:SF4 1 264 1.3E-91 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 SUPERFAMILY SSF52317 1 192 1.93E-54 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.3E-37 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.3E-87 T 26-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.0E-5 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.0E-5 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 Gene3D G3DSA:3.40.50.880 2 191 1.1E-67 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PANTHER PTHR11922:SF7 1 199 3.0E-97 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-13 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.4E-13 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.4E-13 T 26-04-2016 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 Pfam PF00117 Glutamine amidotransferase class-I 4 191 2.4E-55 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS03195 776bc65d8186776bac8b12ef520a2bb9 201 PANTHER PTHR11922 1 199 3.0E-97 T 26-04-2016 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 SUPERFAMILY SSF51430 8 263 1.31E-78 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PANTHER PTHR11732 1 263 3.5E-120 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 Pfam PF00248 Aldo/keto reductase family 15 260 5.2E-54 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PRINTS PR00069 Aldo-keto reductase signature 39 63 3.6E-17 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PRINTS PR00069 Aldo-keto reductase signature 125 142 3.6E-17 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PRINTS PR00069 Aldo-keto reductase signature 95 113 3.6E-17 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.6E-17 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 Gene3D G3DSA:3.20.20.100 3 262 1.8E-78 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PANTHER PTHR11732:SF98 1 263 3.5E-120 T 26-04-2016 PAM18_RS21615 31d0ee82d45671854bc84924afc60e79 273 PIRSF PIRSF000097 1 261 6.0E-37 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS18965 b0581fee97fbeeff6177a8fa3e2cfb7d 203 SMART SM01144 2 187 1.1E-65 T 26-04-2016 IPR005636 DTW PAM18_RS18965 b0581fee97fbeeff6177a8fa3e2cfb7d 203 Pfam PF03942 DTW domain 5 182 1.4E-48 T 26-04-2016 IPR005636 DTW PAM18_RS18965 b0581fee97fbeeff6177a8fa3e2cfb7d 203 PANTHER PTHR21392 3 195 1.0E-62 T 26-04-2016 PAM18_RS18680 344b4fb50eafe68b05b12efef516797d 155 Pfam PF03918 Cytochrome C biogenesis protein 9 151 1.7E-56 T 26-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family PAM18_RS18680 344b4fb50eafe68b05b12efef516797d 155 PANTHER PTHR30009 22 154 2.2E-42 T 26-04-2016 PAM18_RS18680 344b4fb50eafe68b05b12efef516797d 155 PANTHER PTHR30009:SF6 22 154 2.2E-42 T 26-04-2016 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.3E-219 T 26-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:3.40.50.300 132 418 2.0E-108 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:1.10.720.10 1 47 3.1E-20 T 26-04-2016 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 3.4E-32 T 26-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 4.7E-24 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 PANTHER PTHR15184:SF34 47 402 5.3E-197 T 26-04-2016 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.1E-15 T 26-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00357 52 118 8.8E-20 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF50249 49 125 1.77E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.582 T 26-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF52540 90 371 3.24E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF68912 1 46 3.92E-11 T 26-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:2.40.50.140 49 117 2.6E-36 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 PANTHER PTHR15184 47 402 5.3E-197 T 26-04-2016 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00959 5 47 9.0E-16 T 26-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PAM18_RS27385 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00382 170 355 6.3E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 Gene3D G3DSA:1.20.58.220 327 426 9.2E-14 T 26-04-2016 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 PANTHER PTHR10010 1 450 5.3E-43 T 26-04-2016 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF02690 Na+/Pi-cotransporter 158 280 1.4E-9 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.7E-35 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.8E-106 T 26-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 SUPERFAMILY SSF109755 320 532 3.66E-35 T 26-04-2016 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 521 4.0E-116 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 Pfam PF01895 PhoU domain 340 422 8.9E-12 T 26-04-2016 IPR026022 PhoU domain PAM18_RS28595 89fb52c9fe86eff00d43cb1a6554156d 582 PANTHER PTHR10010:SF26 1 450 5.3E-43 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 8.9E-65 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PANTHER PTHR30222 8 365 2.9E-221 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PANTHER PTHR30222:SF11 8 365 2.9E-221 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 Pfam PF13416 Bacterial extracellular solute-binding protein 41 330 1.7E-33 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 Gene3D G3DSA:3.40.190.10 40 135 9.8E-14 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 PIRSF PIRSF019574 1 365 1.4E-131 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 SUPERFAMILY SSF53850 28 364 3.73E-97 T 26-04-2016 PAM18_RS11625 7d808ea9c8d16d3e9c98f904752fdccd 365 Gene3D G3DSA:3.40.190.10 136 313 3.7E-69 T 26-04-2016 PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 Gene3D G3DSA:1.10.10.10 146 192 2.7E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 PIRSF PIRSF036382 2 196 2.0E-51 T 26-04-2016 IPR008327 Signal transduction response regulator, antiterminator PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 Gene3D G3DSA:3.40.50.2300 1 127 4.0E-44 T 26-04-2016 PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 SUPERFAMILY SSF52172 5 190 9.6E-45 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 SMART SM01012 135 190 1.2E-14 T 26-04-2016 IPR005561 ANTAR domain GO:0003723 PAM18_RS08235 cc3d91b77f06754fbf47c565ba9ba540 196 Pfam PF03861 ANTAR domain 137 190 9.1E-14 T 26-04-2016 IPR005561 ANTAR domain GO:0003723 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 SUPERFAMILY SSF53067 138 312 1.04E-44 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 PIRSF PIRSF001267 2 501 8.4E-200 T 26-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 SUPERFAMILY SSF109604 314 500 7.43E-50 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 PANTHER PTHR30005 3 501 3.5E-228 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 SUPERFAMILY SSF53067 12 134 1.07E-34 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 PANTHER PTHR30005:SF4 3 501 3.5E-228 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 307 3.2E-102 T 26-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 Gene3D G3DSA:3.30.420.40 7 132 9.2E-44 T 26-04-2016 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 Pfam PF02541 Ppx/GppA phosphatase family 32 310 5.9E-77 T 26-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 PAM18_RS27395 5a2a63acf1b7f277dc4868d4f6dc0868 501 Gene3D G3DSA:3.30.420.150 133 312 2.1E-53 T 26-04-2016 PAM18_RS22095 5938a04f0137b0fa205d46a233d75c56 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 2.5E-20 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS22095 5938a04f0137b0fa205d46a233d75c56 131 SUPERFAMILY SSF54593 1 127 1.75E-34 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS22095 5938a04f0137b0fa205d46a233d75c56 131 Gene3D G3DSA:3.10.180.10 1 130 3.0E-41 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS22095 5938a04f0137b0fa205d46a233d75c56 131 PANTHER PTHR10374 1 125 5.0E-48 T 26-04-2016 PAM18_RS22095 5938a04f0137b0fa205d46a233d75c56 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 1.1E-53 T 26-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 PAM18_RS18550 6d1ebce0ddf712a99bcdc4b07c437724 455 Pfam PF00860 Permease family 22 400 1.0E-99 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS18550 6d1ebce0ddf712a99bcdc4b07c437724 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 432 2.1E-113 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS18550 6d1ebce0ddf712a99bcdc4b07c437724 455 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 349 369 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS18550 6d1ebce0ddf712a99bcdc4b07c437724 455 PANTHER PTHR11119 14 441 5.7E-114 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS18550 6d1ebce0ddf712a99bcdc4b07c437724 455 TIGRFAM TIGR03173 pbuX: xanthine permease 26 434 1.1E-160 T 26-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 Pfam PF00795 Carbon-nitrogen hydrolase 3 254 5.1E-50 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 26-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 Gene3D G3DSA:3.60.110.10 1 270 3.9E-78 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 PANTHER PTHR23088:SF27 1 270 2.0E-107 T 26-04-2016 PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 SUPERFAMILY SSF56317 1 268 1.96E-75 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS23325 fd53f800e4ce23fe4329f92fe01c8f9b 282 PANTHER PTHR23088 1 270 2.0E-107 T 26-04-2016 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF07650 KH domain 38 111 4.1E-22 T 26-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.300.20 17 107 7.1E-35 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54821 108 206 9.94E-43 T 26-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 SMART SM00322 60 125 3.0E-9 T 26-04-2016 IPR004087 K Homology domain GO:0003676 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 40.232 T 26-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 PANTHER PTHR11760:SF19 2 222 5.0E-148 T 26-04-2016 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54814 2 106 7.85E-39 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.1140.32 108 207 3.2E-49 T 26-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 PANTHER PTHR11760 2 222 5.0E-148 T 26-04-2016 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-99 T 26-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.8E-42 T 26-04-2016 PAM18_RS03455 397f374ffa27cc6b634f1a88a3a5d2aa 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 26-04-2016 IPR018280 Ribosomal protein S3, conserved site PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PANTHER PTHR30065 1 262 1.3E-147 T 26-04-2016 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.8E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.8E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.8E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.8E-27 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 256 1.4E-88 T 26-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 PANTHER PTHR30065:SF2 1 262 1.3E-147 T 26-04-2016 PAM18_RS17200 658361b4b52bca5af5f4aaf9fa0fdd15 262 Pfam PF01311 Bacterial export proteins, family 1 11 244 7.6E-52 T 26-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PAM18_RS08425 4e7ad28a6a65d12df634d2d52a373ddb 295 PIRSF PIRSF007580 1 293 8.2E-120 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS08425 4e7ad28a6a65d12df634d2d52a373ddb 295 PANTHER PTHR39456:SF1 1 295 1.9E-200 T 26-04-2016 PAM18_RS08425 4e7ad28a6a65d12df634d2d52a373ddb 295 PANTHER PTHR39456 1 295 1.9E-200 T 26-04-2016 PAM18_RS08425 4e7ad28a6a65d12df634d2d52a373ddb 295 Pfam PF10118 Predicted metal-dependent hydrolase 10 273 2.3E-72 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 PANTHER PTHR32071:SF18 1 449 3.0E-202 T 26-04-2016 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 SUPERFAMILY SSF52172 9 192 3.27E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Gene3D G3DSA:3.40.50.2300 10 140 4.2E-33 T 26-04-2016 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Gene3D G3DSA:3.40.50.300 149 319 1.5E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Gene3D G3DSA:1.10.8.60 320 391 2.1E-27 T 26-04-2016 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Pfam PF00072 Response regulator receiver domain 11 119 4.0E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 SUPERFAMILY SSF46689 360 449 1.31E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 SUPERFAMILY SSF52540 150 388 1.23E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Gene3D G3DSA:1.10.10.60 392 449 1.1E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 SMART SM00382 167 318 4.6E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 SMART SM00448 9 120 2.4E-34 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Pfam PF00158 Sigma-54 interaction domain 149 313 5.0E-63 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 Pfam PF02954 Bacterial regulatory protein, Fis family 407 447 1.1E-9 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS28645 0f2591e24d6b1fe4e970175bc1886388 449 PANTHER PTHR32071 1 449 3.0E-202 T 26-04-2016 PAM18_RS10765 1ef84922c660fd95a85b2b6f8cf53cc6 144 Pfam PF07681 DoxX 16 103 1.8E-20 T 26-04-2016 IPR032808 DoxX family PAM18_RS10765 1ef84922c660fd95a85b2b6f8cf53cc6 144 PANTHER PTHR33452:SF1 1 144 6.5E-45 T 26-04-2016 PAM18_RS10765 1ef84922c660fd95a85b2b6f8cf53cc6 144 PANTHER PTHR33452 1 144 6.5E-45 T 26-04-2016 PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 233 274 - T 26-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 Pfam PF00561 alpha/beta hydrolase fold 60 308 2.2E-17 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 Gene3D G3DSA:3.40.50.1820 43 326 6.9E-32 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 PIRSF PIRSF005211 1 332 1.9E-112 T 26-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 PANTHER PTHR10794 3 327 4.0E-80 T 26-04-2016 PAM18_RS01860 77f4d1c08f3b27a1993b304e54d02a36 332 SUPERFAMILY SSF53474 25 310 2.88E-44 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04880 8e048150e10378ba929df78e280fbb3d 110 Pfam PF08850 Domain of unknown function (DUF1820) 8 103 1.6E-43 T 26-04-2016 IPR014949 Protein of unknown function DUF1820 PAM18_RS04880 8e048150e10378ba929df78e280fbb3d 110 PIRSF PIRSF028538 2 109 7.6E-53 T 26-04-2016 IPR014949 Protein of unknown function DUF1820 PAM18_RS04935 0f9fdb35e7fd09ddccfa8cbc66776caa 361 PANTHER PTHR15032:SF4 5 350 2.7E-128 T 26-04-2016 PAM18_RS04935 0f9fdb35e7fd09ddccfa8cbc66776caa 361 Pfam PF12706 Beta-lactamase superfamily domain 102 300 4.6E-42 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS04935 0f9fdb35e7fd09ddccfa8cbc66776caa 361 SUPERFAMILY SSF56281 84 306 7.31E-32 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS04935 0f9fdb35e7fd09ddccfa8cbc66776caa 361 Gene3D G3DSA:3.60.15.10 52 343 7.7E-75 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS04935 0f9fdb35e7fd09ddccfa8cbc66776caa 361 PANTHER PTHR15032 5 350 2.7E-128 T 26-04-2016 PAM18_RS13210 32d6ddd4b5a122d6c3c909eefd3f4fc7 303 Pfam PF13557 Putative MetA-pathway of phenol degradation 55 299 4.1E-57 T 26-04-2016 IPR025737 MetA-pathway of phenol degradation, putative PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 PANTHER PTHR22855:SF21 1 239 6.2E-92 T 26-04-2016 PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 Gene3D G3DSA:3.90.226.10 15 228 1.5E-34 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 Pfam PF01039 Carboxyl transferase domain 18 235 1.8E-14 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 PANTHER PTHR22855 1 239 6.2E-92 T 26-04-2016 PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 SUPERFAMILY SSF52096 4 236 8.71E-37 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS01040 001cebb64f2c2e0a7b3b1b4066861275 287 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 11 281 3.2E-117 T 26-04-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 PANTHER PTHR11935:SF110 6 283 2.1E-192 T 26-04-2016 PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 SMART SM00849 15 205 7.6E-24 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 Gene3D G3DSA:3.60.15.10 8 251 7.8E-55 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 PANTHER PTHR11935 6 283 2.1E-192 T 26-04-2016 PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 SUPERFAMILY SSF56281 8 253 5.42E-51 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10505 572caa0b758c13bcb5ccfbd196db3f2d 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 4.1E-21 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 SUPERFAMILY SSF46785 3 134 1.09E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 PANTHER PTHR33164 5 135 8.2E-34 T 26-04-2016 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 Gene3D G3DSA:1.10.10.10 4 134 8.0E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 Pfam PF12802 MarR family 30 86 6.5E-11 T 26-04-2016 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 SMART SM00347 24 123 1.4E-11 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 PANTHER PTHR33164:SF1 5 135 8.2E-34 T 26-04-2016 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.12E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.12E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS19150 76d6b780e6525ce6f63a00fb524ab814 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.12E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 PANTHER PTHR12418:SF33 1 138 6.0E-52 T 26-04-2016 PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 Gene3D G3DSA:3.10.129.10 2 139 2.0E-47 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 9.0E-36 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 Pfam PF03061 Thioesterase superfamily 51 126 2.3E-14 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 SUPERFAMILY SSF54637 13 139 8.13E-31 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17575 36f2ef9c51fda26a287427823f8395d3 145 PANTHER PTHR12418 1 138 6.0E-52 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100920 384 539 3.66E-60 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.30.30 53 108 9.4E-28 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 187 382 2.07E-69 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.888 T 26-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Pfam PF00012 Hsp70 protein 4 603 3.6E-264 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.0E-81 T 26-04-2016 IPR013126 Heat shock protein 70 family PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.2E-290 T 26-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PANTHER PTHR19375:SF173 2 637 0.0 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100934 507 603 1.01E-23 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:2.60.34.10 390 531 1.9E-70 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.90.640.10 230 315 3.0E-30 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 319 346 5.9E-34 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 196 229 5.9E-34 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:1.20.1270.10 532 603 5.5E-27 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 119 195 8.0E-65 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 4 52 8.0E-65 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 4 183 8.85E-66 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 PANTHER PTHR19375 2 637 0.0 T 26-04-2016 PAM18_RS24935 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 347 389 2.7E-4 T 26-04-2016 PAM18_RS28555 831931960bb06962fbb78c054d79aaae 139 Gene3D G3DSA:3.90.1590.10 2 132 8.9E-39 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS28555 831931960bb06962fbb78c054d79aaae 139 PANTHER PTHR33337:SF4 4 133 1.0E-57 T 26-04-2016 PAM18_RS28555 831931960bb06962fbb78c054d79aaae 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 6.0E-19 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS28555 831931960bb06962fbb78c054d79aaae 139 PANTHER PTHR33337 4 133 1.0E-57 T 26-04-2016 PAM18_RS28555 831931960bb06962fbb78c054d79aaae 139 SUPERFAMILY SSF51316 1 130 1.03E-41 T 26-04-2016 IPR011057 Mss4-like PAM18_RS18090 a70e5465c4e6fc266b6e1b85ec0f8238 87 Pfam PF01527 Transposase 2 70 1.4E-22 T 26-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PAM18_RS18090 a70e5465c4e6fc266b6e1b85ec0f8238 87 PANTHER PTHR33609 1 87 2.0E-44 T 26-04-2016 PAM18_RS18090 a70e5465c4e6fc266b6e1b85ec0f8238 87 Gene3D G3DSA:1.10.10.60 6 82 3.3E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS18090 a70e5465c4e6fc266b6e1b85ec0f8238 87 SUPERFAMILY SSF46689 2 68 7.7E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 PANTHER PTHR13903:SF4 1 308 8.0E-170 T 26-04-2016 PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 PIRSF PIRSF006232 19 300 4.0E-81 T 26-04-2016 IPR012093 Pirin PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 SUPERFAMILY SSF51182 25 297 5.44E-70 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 PANTHER PTHR13903 1 308 8.0E-170 T 26-04-2016 IPR012093 Pirin PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 Gene3D G3DSA:2.60.120.10 27 263 1.6E-61 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 Pfam PF05726 Pirin C-terminal cupin domain 191 288 3.3E-23 T 26-04-2016 IPR008778 Pirin, C-terminal domain PAM18_RS19565 c1c1817dc612b22a1d22826bca3c5ecf 315 Pfam PF02678 Pirin 40 139 1.7E-30 T 26-04-2016 IPR003829 Pirin, N-terminal domain PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 PANTHER PTHR33121:SF13 25 284 5.9E-53 T 26-04-2016 PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 Gene3D G3DSA:3.20.20.450 25 263 2.2E-37 T 26-04-2016 IPR001633 EAL domain PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 PANTHER PTHR33121 25 284 5.9E-53 T 26-04-2016 PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 SMART SM00052 22 264 1.2E-12 T 26-04-2016 IPR001633 EAL domain PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 Pfam PF00563 EAL domain 28 259 5.5E-41 T 26-04-2016 IPR001633 EAL domain PAM18_RS14925 d84eac60f1192b73e0ea3c4a0b0e9a59 285 SUPERFAMILY SSF141868 29 264 1.16E-38 T 26-04-2016 IPR001633 EAL domain PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 PANTHER PTHR34597 59 545 3.1E-75 T 26-04-2016 PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 Pfam PF08479 POTRA domain, ShlB-type 61 134 1.2E-22 T 26-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 Gene3D G3DSA:2.40.160.50 169 542 1.4E-60 T 26-04-2016 PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 PANTHER PTHR34597:SF1 59 545 3.1E-75 T 26-04-2016 PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 Pfam PF01103 Surface antigen 225 530 4.3E-6 T 26-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PAM18_RS23660 632973ecd4b638f2df7635768d997f0f 545 Gene3D G3DSA:3.10.20.310 54 134 2.4E-15 T 26-04-2016 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 TIGRFAM TIGR00673 cynS: cyanase 4 156 8.3E-60 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PIRSF PIRSF001263 3 156 3.9E-64 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 78.039 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 Pfam PF02560 Cyanate lyase C-terminal domain 88 154 1.1E-31 T 26-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 Gene3D G3DSA:3.30.1160.10 89 156 1.4E-35 T 26-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 SUPERFAMILY SSF47413 2 85 5.63E-20 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 SUPERFAMILY SSF55234 88 155 2.09E-28 T 26-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 91 105 5.7E-35 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 141 151 5.7E-35 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 22 37 5.7E-35 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 109 125 5.7E-35 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 42 59 5.7E-35 T 26-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 SMART SM01116 83 156 1.7E-45 T 26-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PANTHER PTHR34186:SF2 1 156 1.5E-71 T 26-04-2016 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 PANTHER PTHR34186 1 156 1.5E-71 T 26-04-2016 PAM18_RS15345 bc98e82c418935418ecc451efaae2985 156 Gene3D G3DSA:1.10.260.40 1 86 1.4E-29 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 Pfam PF14579 Helix-hairpin-helix motif 767 855 1.2E-21 T 26-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 Pfam PF02811 PHP domain 6 121 3.2E-18 T 26-04-2016 IPR004013 PHP domain GO:0003824 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 Gene3D G3DSA:3.20.20.140 5 193 4.6E-11 T 26-04-2016 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 968 6.1E-172 T 26-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 PANTHER PTHR32294 1 1013 0.0 T 26-04-2016 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 SUPERFAMILY SSF89550 4 185 1.57E-10 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 4 1024 14.01 T 26-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 PANTHER PTHR32294:SF4 1 1013 0.0 T 26-04-2016 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 268 691 7.5E-148 T 26-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS22310 df7ec7a80dbd50c5c8ff4ae6cb6d84f4 1024 SMART SM00481 5 72 2.8E-10 T 26-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 SUPERFAMILY SSF51055 438 481 5.1E-14 T 26-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 PANTHER PTHR11177:SF45 8 388 3.3E-141 T 26-04-2016 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 SMART SM00060 343 417 3.6E-6 T 26-04-2016 IPR003961 Fibronectin type III GO:0005515 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 Gene3D G3DSA:2.10.10.20 438 481 4.7E-19 T 26-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 Gene3D G3DSA:2.60.40.10 342 421 8.6E-14 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 Gene3D G3DSA:3.20.20.80 26 324 3.4E-57 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 SMART SM00495 436 482 2.7E-4 T 26-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 Pfam PF00704 Glycosyl hydrolases family 18 29 311 2.6E-26 T 26-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 ProSitePatterns PS01095 Chitinases family 18 active site. 135 143 - T 26-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 SUPERFAMILY SSF51445 25 321 7.0E-47 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 SUPERFAMILY SSF49265 342 427 5.91E-11 T 26-04-2016 IPR003961 Fibronectin type III GO:0005515 PAM18_RS14085 04543def341b7b470a4d0b5fad2a4fe7 483 PANTHER PTHR11177 8 388 3.3E-141 T 26-04-2016 PAM18_RS10940 17e8844812d8c4de75793de330b794ea 291 Pfam PF01435 Peptidase family M48 77 288 1.7E-37 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS10940 17e8844812d8c4de75793de330b794ea 291 Gene3D G3DSA:3.30.2010.10 72 159 1.6E-30 T 26-04-2016 PAM18_RS10940 17e8844812d8c4de75793de330b794ea 291 PANTHER PTHR10120:SF19 1 291 4.0E-99 T 26-04-2016 PAM18_RS10940 17e8844812d8c4de75793de330b794ea 291 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.075 T 26-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 PAM18_RS10940 17e8844812d8c4de75793de330b794ea 291 PANTHER PTHR10120 1 291 4.0E-99 T 26-04-2016 PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 Gene3D G3DSA:3.40.50.150 6 186 6.3E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 8.8E-92 T 26-04-2016 IPR010743 Methionine biosynthesis MetW PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 194 8.6E-91 T 26-04-2016 IPR010743 Methionine biosynthesis MetW PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 PANTHER PTHR10108 1 166 9.2E-86 T 26-04-2016 PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 SUPERFAMILY SSF53335 3 192 7.86E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01965 d0ac014d0a4b0140b2de5cbd2c8406da 206 PANTHER PTHR10108:SF831 1 166 9.2E-86 T 26-04-2016 PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 SMART SM00852 15 159 9.0E-28 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 7.6E-84 T 26-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 SUPERFAMILY SSF53218 8 169 9.03E-45 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 Pfam PF00994 Probable molybdopterin binding domain 15 156 7.5E-31 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 Gene3D G3DSA:3.40.980.10 7 168 2.3E-45 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 PIRSF PIRSF006443 1 167 2.3E-59 T 26-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 2.1E-31 T 26-04-2016 IPR001453 MoaB/Mog domain PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 PANTHER PTHR10192:SF18 5 185 1.5E-106 T 26-04-2016 PAM18_RS05205 ea70ca8343109d60acf0c55614fb0dac 185 PANTHER PTHR10192 5 185 1.5E-106 T 26-04-2016 PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 SUPERFAMILY SSF103473 7 379 1.57E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 196 378 4.4E-28 T 26-04-2016 PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 6 184 1.7E-20 T 26-04-2016 PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 Pfam PF12832 MFS_1 like family 7 361 3.1E-85 T 26-04-2016 IPR024989 Major facilitator superfamily associated domain PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 PANTHER PTHR23522 1 382 6.3E-134 T 26-04-2016 PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 PANTHER PTHR23522:SF3 1 382 6.3E-134 T 26-04-2016 PAM18_RS17250 840f5fa5c384e1f8ce5f1827acfeda8b 383 PIRSF PIRSF004925 2 382 9.7E-108 T 26-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 PANTHER PTHR10277 2 305 4.9E-158 T 26-04-2016 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 SUPERFAMILY SSF51569 2 277 1.03E-67 T 26-04-2016 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 SUPERFAMILY SSF51182 400 442 6.77E-5 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 Pfam PF00682 HMGL-like 2 259 2.6E-59 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 Gene3D G3DSA:3.20.20.70 2 305 8.7E-78 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 PANTHER PTHR10277:SF45 2 305 4.9E-158 T 26-04-2016 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 189 202 - T 26-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 PAM18_RS19505 1b20e1d9fdeb8115229050ed0afcb073 455 Gene3D G3DSA:2.60.120.10 400 443 4.9E-4 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PANTHER PTHR30070 2 222 2.7E-65 T 26-04-2016 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PIRSF PIRSF002764 1 222 4.5E-81 T 26-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 Pfam PF03379 CcmB protein 6 219 9.3E-84 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PANTHER PTHR30070:SF1 2 222 2.7E-65 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.5E-86 T 26-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18710 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.9E-70 T 26-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 SUPERFAMILY SSF103473 13 427 8.11E-57 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 Gene3D G3DSA:1.20.1250.20 242 433 1.7E-28 T 26-04-2016 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 Gene3D G3DSA:1.20.1250.20 18 216 4.4E-41 T 26-04-2016 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 PIRSF PIRSF002808 2 441 5.6E-78 T 26-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 PANTHER PTHR11662 2 432 1.9E-160 T 26-04-2016 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 PANTHER PTHR11662:SF141 2 432 1.9E-160 T 26-04-2016 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 Pfam PF07690 Major Facilitator Superfamily 287 425 1.2E-9 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS17825 95bff31e3ef01024e124574f1afc5191 453 Pfam PF07690 Major Facilitator Superfamily 29 274 6.9E-31 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 PANTHER PTHR11712:SF272 179 555 2.2E-49 T 26-04-2016 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 154 380 8.3E-30 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Gene3D G3DSA:3.40.47.10 389 541 4.2E-22 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 184 371 1.6E-12 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 344 546 2.99E-30 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 PANTHER PTHR11712 179 555 2.2E-49 T 26-04-2016 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SMART SM00825 Beta-ketoacyl synthase 5 549 0.0015 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Gene3D G3DSA:3.40.47.10 187 383 4.3E-23 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS27055 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 382 496 8.8E-11 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS00525 e6817e76dac9400d559da917ba70fecd 523 PANTHER PTHR11814 9 492 1.1E-217 T 26-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PAM18_RS00525 e6817e76dac9400d559da917ba70fecd 523 PANTHER PTHR11814:SF123 9 492 1.1E-217 T 26-04-2016 PAM18_RS00525 e6817e76dac9400d559da917ba70fecd 523 Pfam PF00916 Sulfate permease family 16 386 5.7E-63 T 26-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 PANTHER PTHR18895:SF70 72 320 1.8E-105 T 26-04-2016 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 331 41.221 T 26-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 PANTHER PTHR18895 72 320 1.8E-105 T 26-04-2016 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 Gene3D G3DSA:3.40.50.150 162 309 3.1E-21 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 SUPERFAMILY SSF53335 93 306 2.74E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 260 266 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 Pfam PF05175 Methyltransferase small domain 161 327 2.5E-54 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PAM18_RS24130 0c2e8a019cd0062d3b0385b8ca9c4e6d 332 Pfam PF08468 Methyltransferase small domain N-terminal 5 153 8.6E-40 T 26-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 PIRSF PIRSF037208 1 235 2.0E-94 T 26-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 1.4E-40 T 26-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 PANTHER PTHR21367 12 232 4.0E-85 T 26-04-2016 IPR030700 Arginine-tRNA-protein transferase PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 235 45.054 T 26-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 SUPERFAMILY SSF55729 78 233 1.34E-25 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12105 473a65bc27a24a9dc0545ae437558593 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 7.5E-19 T 26-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 Pfam PF03109 ABC1 family 114 233 1.7E-36 T 26-04-2016 IPR004147 UbiB domain PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 PANTHER PTHR10566:SF79 6 445 1.4E-271 T 26-04-2016 PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 Gene3D G3DSA:3.90.1200.10 252 298 2.2E-5 T 26-04-2016 PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 SUPERFAMILY SSF56112 97 160 1.86E-47 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 SUPERFAMILY SSF56112 195 438 1.86E-47 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 PANTHER PTHR10566 6 445 1.4E-271 T 26-04-2016 PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 533 54.219 T 26-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 PAM18_RS26490 d671422f9ab5d8423cd8f0ff25039ee2 533 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 447 1.6E-177 T 26-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PANTHER PTHR13789 415 449 3.3E-100 T 26-04-2016 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PANTHER PTHR13789 1 169 3.3E-100 T 26-04-2016 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Gene3D G3DSA:3.40.50.720 1 151 1.4E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Gene3D G3DSA:3.40.50.720 232 375 6.9E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 SUPERFAMILY SSF116726 361 436 1.83E-9 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-30 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-30 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-30 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-30 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-30 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Pfam PF02080 TrkA-C domain 156 221 2.5E-12 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Pfam PF02080 TrkA-C domain 389 450 1.5E-12 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 SUPERFAMILY SSF51735 1 150 9.86E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 SUPERFAMILY SSF51735 231 375 1.84E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Gene3D G3DSA:3.30.70.1450 389 435 1.6E-5 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Gene3D G3DSA:3.30.70.1450 161 223 3.2E-5 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Pfam PF02254 TrkA-N domain 234 349 2.6E-23 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 Pfam PF02254 TrkA-N domain 3 105 1.3E-26 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 SUPERFAMILY SSF116726 135 221 1.15E-11 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PANTHER PTHR13789:SF225 415 449 3.3E-100 T 26-04-2016 PAM18_RS00080 6a8e414e673ae77a47eb723d7d53e105 457 PANTHER PTHR13789:SF225 1 169 3.3E-100 T 26-04-2016 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.0E-132 T 26-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 SUPERFAMILY SSF55729 1 337 1.85E-120 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:3.40.630.30 2 80 6.3E-5 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 338 7.1E-165 T 26-04-2016 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:2.40.40.20 274 338 4.2E-32 T 26-04-2016 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 8.7E-127 T 26-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 PANTHER PTHR30420:SF3 1 338 5.1E-289 T 26-04-2016 PAM18_RS21165 02e0b09d7dc26721f386b9129f22df9b 338 PANTHER PTHR30420 1 338 5.1E-289 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 Gene3D G3DSA:3.40.50.2000 1 148 1.7E-52 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 PANTHER PTHR30160:SF7 1 337 8.2E-106 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 SUPERFAMILY SSF53756 1 338 2.41E-101 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 PANTHER PTHR30160 1 337 8.2E-106 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 Gene3D G3DSA:3.40.50.2000 163 338 1.6E-56 T 26-04-2016 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 337 3.3E-162 T 26-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 PAM18_RS26225 57663cefa3f998a8d5735d5d26989416 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 318 5.5E-91 T 26-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 Pfam PF01192 RNA polymerase Rpb6 8 59 3.8E-17 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 PANTHER PTHR34476 2 87 5.1E-26 T 26-04-2016 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.792 T 26-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 SMART SM01409 8 61 4.8E-17 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 SUPERFAMILY SSF63562 1 77 2.79E-25 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 8.0E-23 T 26-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS27880 2f7b9e0750b55a019522f844daf10501 88 Gene3D G3DSA:3.90.940.10 1 68 1.5E-17 T 26-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 Pfam PF00448 SRP54-type protein, GTPase domain 247 446 3.3E-77 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 SMART SM00962 246 447 6.2E-122 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 175 446 1.1E-109 T 26-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 Gene3D G3DSA:3.40.50.300 243 446 1.4E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 420 433 - T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 SMART SM00382 245 392 2.0E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 PANTHER PTHR11564:SF16 140 452 7.8E-145 T 26-04-2016 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 SUPERFAMILY SSF47364 145 225 1.05E-20 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 Pfam PF02881 SRP54-type protein, helical bundle domain 162 227 4.2E-13 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 SUPERFAMILY SSF52540 244 446 6.76E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 SMART SM00963 150 231 2.5E-24 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 Gene3D G3DSA:1.20.120.140 137 227 2.4E-30 T 26-04-2016 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 PANTHER PTHR11564 140 452 7.8E-145 T 26-04-2016 PAM18_RS01885 2b603d9e069ea8702ba7248e86b16de9 452 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 174 447 62.412 T 26-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PAM18_RS09590 145edafa0c5a8b0c1efa22c436a19207 174 Gene3D G3DSA:3.30.1360.100 100 171 1.1E-18 T 26-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain PAM18_RS09590 145edafa0c5a8b0c1efa22c436a19207 174 PIRSF PIRSF006291 15 174 7.2E-27 T 26-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 PAM18_RS09590 145edafa0c5a8b0c1efa22c436a19207 174 SUPERFAMILY SSF103054 99 171 5.1E-15 T 26-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain PAM18_RS09590 145edafa0c5a8b0c1efa22c436a19207 174 Pfam PF04612 Type II secretion system (T2SS), protein M 18 171 1.6E-44 T 26-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 PAM18_RS13750 9b57879d782582e0bbe52770a0680f9e 141 Pfam PF04965 Gene 25-like lysozyme 26 115 3.1E-17 T 26-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PAM18_RS13750 9b57879d782582e0bbe52770a0680f9e 141 SUPERFAMILY SSF160719 27 126 1.44E-13 T 26-04-2016 PAM18_RS13750 9b57879d782582e0bbe52770a0680f9e 141 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 125 8.4E-26 T 26-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein PAM18_RS13750 9b57879d782582e0bbe52770a0680f9e 141 Gene3D G3DSA:3.10.450.40 28 117 3.3E-9 T 26-04-2016 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 SUPERFAMILY SSF161098 23 274 2.09E-53 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 Gene3D G3DSA:1.10.3720.10 25 281 4.5E-51 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 280 1.7E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 PANTHER PTHR30406 15 286 1.1E-160 T 26-04-2016 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 279 4.7E-122 T 26-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 PANTHER PTHR30406:SF1 15 286 1.1E-160 T 26-04-2016 PAM18_RS01405 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 276 4.5E-97 T 26-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 PIRSF PIRSF000167 3 459 3.3E-168 T 26-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF06969 HemN C-terminal domain 369 435 4.9E-12 T 26-04-2016 IPR010723 HemN, C-terminal PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 460 3.1E-173 T 26-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 Gene3D G3DSA:3.80.30.20 54 287 3.2E-30 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 SMART SM00729 53 276 4.8E-51 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF04055 Radical SAM superfamily 58 232 3.4E-18 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 SUPERFAMILY SSF102114 5 448 1.27E-134 T 26-04-2016 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 PANTHER PTHR13932:SF6 1 455 4.4E-251 T 26-04-2016 PAM18_RS17945 47b85eb241fea8b0c719959ccf04bd57 460 PANTHER PTHR13932 1 455 4.4E-251 T 26-04-2016 PAM18_RS07620 c3e16885e697edc4c77725cbb7b85e5e 408 Gene3D G3DSA:1.10.530.10 222 336 8.3E-6 T 26-04-2016 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Gene3D G3DSA:3.50.50.60 135 205 6.7E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Gene3D G3DSA:3.50.50.60 305 363 6.7E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Gene3D G3DSA:3.50.50.60 3 77 6.7E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Pfam PF01266 FAD dependent oxidoreductase 5 343 3.2E-58 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Gene3D G3DSA:3.30.9.10 81 134 1.6E-14 T 26-04-2016 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 Gene3D G3DSA:3.30.9.10 206 304 1.6E-14 T 26-04-2016 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 SUPERFAMILY SSF54373 204 304 4.58E-12 T 26-04-2016 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 SUPERFAMILY SSF51905 4 208 1.55E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 SUPERFAMILY SSF51905 305 363 1.55E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 PANTHER PTHR13847:SF189 3 363 3.0E-126 T 26-04-2016 PAM18_RS19240 8a1926767e776cb3c3af92aecbd622ed 371 PANTHER PTHR13847 3 363 3.0E-126 T 26-04-2016 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 PANTHER PTHR21666 461 639 4.9E-47 T 26-04-2016 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 Gene3D G3DSA:1.25.20.10 26 384 4.0E-106 T 26-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 SUPERFAMILY SSF48435 26 475 5.36E-129 T 26-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 Gene3D G3DSA:1.10.1240.20 405 470 6.6E-17 T 26-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 SUPERFAMILY SSF53955 478 636 2.97E-45 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 470 5.2E-17 T 26-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 Gene3D G3DSA:1.10.530.10 473 633 1.5E-49 T 26-04-2016 PAM18_RS09970 1403b095f38b1436bb375c0509c5b39b 642 Pfam PF01464 Transglycosylase SLT domain 485 596 9.1E-28 T 26-04-2016 IPR008258 Transglycosylase SLT domain 1 PAM18_RS13225 825be1d95b2ae7a4689783881dac2fe6 232 PANTHER PTHR11820:SF7 24 231 7.7E-86 T 26-04-2016 PAM18_RS13225 825be1d95b2ae7a4689783881dac2fe6 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 2.1E-51 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS13225 825be1d95b2ae7a4689783881dac2fe6 232 PANTHER PTHR11820 24 231 7.7E-86 T 26-04-2016 PAM18_RS13225 825be1d95b2ae7a4689783881dac2fe6 232 Gene3D G3DSA:3.90.850.10 22 232 6.5E-77 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS13225 825be1d95b2ae7a4689783881dac2fe6 232 SUPERFAMILY SSF56529 21 232 2.49E-67 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 PANTHER PTHR12029 3 244 6.1E-81 T 26-04-2016 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 SMART SM00967 6 81 6.3E-20 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF55315 2 77 2.0E-18 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.30.1330.30 2 77 1.5E-23 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 8.3E-19 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF00588 SpoU rRNA Methylase family 98 238 2.4E-40 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF75217 70 245 5.3E-49 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.40.1280.10 94 245 3.1E-55 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 4.6E-82 T 26-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 PAM18_RS25825 32f0d17dda4859c69ae6254654c6abab 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.204 T 26-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 73.13 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 PIRSF PIRSF001399 1 147 3.8E-63 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 Gene3D G3DSA:3.40.50.9100 2 144 1.6E-66 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 PANTHER PTHR21272 1 148 2.9E-92 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 Pfam PF01220 Dehydroquinase class II 5 140 8.5E-60 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 142 6.6E-62 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 26-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-61 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS01215 3099c1f9f66af573283a2fa2e540345a 148 SUPERFAMILY SSF52304 4 145 1.27E-62 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS27025 03d4bc80449dda9f9db34e748759f23d 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 2.6E-22 T 26-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PAM18_RS27025 03d4bc80449dda9f9db34e748759f23d 210 PANTHER PTHR35011:SF1 66 205 2.1E-87 T 26-04-2016 PAM18_RS27025 03d4bc80449dda9f9db34e748759f23d 210 PANTHER PTHR35011:SF1 1 38 2.1E-87 T 26-04-2016 PAM18_RS27025 03d4bc80449dda9f9db34e748759f23d 210 PANTHER PTHR35011 66 205 2.1E-87 T 26-04-2016 PAM18_RS27025 03d4bc80449dda9f9db34e748759f23d 210 PANTHER PTHR35011 1 38 2.1E-87 T 26-04-2016 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PANTHER PTHR30046:SF2 1 244 1.3E-149 T 26-04-2016 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 Pfam PF01514 Secretory protein of YscJ/FliF family 12 190 2.4E-26 T 26-04-2016 IPR006182 Secretory protein YscJ/FliF PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 100 115 6.8E-30 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 28 38 6.8E-30 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 120 133 6.8E-30 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 169 181 6.8E-30 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 80 93 6.8E-30 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 PANTHER PTHR30046 1 244 1.3E-149 T 26-04-2016 PAM18_RS17040 17f3c58f19c23a6885278a8a9af194f8 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 10 195 6.0E-73 T 26-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 SUPERFAMILY SSF103491 15 419 1.44E-128 T 26-04-2016 IPR023201 SecY subunit domain PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 7.8E-130 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 Pfam PF00344 SecY translocase 75 412 6.4E-116 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 26-04-2016 IPR030659 SecY conserved site PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 5.51E-90 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PIRSF PIRSF004557 8 436 3.1E-119 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 Gene3D G3DSA:1.10.3370.10 15 432 6.2E-161 T 26-04-2016 IPR023201 SecY subunit domain PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PANTHER PTHR10906 16 442 2.5E-224 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 PANTHER PTHR10906:SF2 16 442 2.5E-224 T 26-04-2016 PAM18_RS03525 23900d192c3f73be4d006010650338a6 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 29.003 T 26-04-2016 IPR026593 Protein translocase subunit SecY PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 8.1E-35 T 26-04-2016 IPR001602 Uncharacterised protein family UPF0047 PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 139 1.5E-38 T 26-04-2016 IPR001602 Uncharacterised protein family UPF0047 PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 Gene3D G3DSA:2.60.120.460 1 139 4.1E-52 T 26-04-2016 IPR001602 Uncharacterised protein family UPF0047 PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 PANTHER PTHR30615 1 141 4.3E-70 T 26-04-2016 PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 SUPERFAMILY SSF111038 1 139 8.5E-45 T 26-04-2016 IPR001602 Uncharacterised protein family UPF0047 PAM18_RS27625 68b45b96820f77202bbf69e4653f95fb 141 PIRSF PIRSF004681 1 139 7.0E-43 T 26-04-2016 IPR001602 Uncharacterised protein family UPF0047 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 PANTHER PTHR34182 3 125 8.4E-34 T 26-04-2016 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 7.0E-41 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 7.0E-41 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 7.0E-41 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 7.0E-41 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 74 1.2E-24 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS24865 9a944d568df604d032fc4a74b40c55b1 129 Pfam PF03840 Preprotein translocase SecG subunit 5 74 5.9E-20 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PAM18_RS14410 6a6d4d0729204c42e719a3f2c654085a 662 PANTHER PTHR32309:SF13 7 589 1.5E-118 T 26-04-2016 PAM18_RS14410 6a6d4d0729204c42e719a3f2c654085a 662 Pfam PF13807 G-rich domain on putative tyrosine kinase 403 479 1.6E-6 T 26-04-2016 IPR032807 Tyrosine kinase, G-rich domain PAM18_RS14410 6a6d4d0729204c42e719a3f2c654085a 662 Pfam PF02706 Chain length determinant protein 9 190 2.5E-8 T 26-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PAM18_RS14410 6a6d4d0729204c42e719a3f2c654085a 662 PANTHER PTHR32309 7 589 1.5E-118 T 26-04-2016 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 SUPERFAMILY SSF57802 1 53 1.26E-22 T 26-04-2016 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 PIRSF PIRSF000071 1 55 7.3E-26 T 26-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 26-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 Gene3D G3DSA:2.20.28.10 1 54 1.0E-27 T 26-04-2016 IPR004039 Rubredoxin-type fold PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 33 49 4.3E-9 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 3 19 4.3E-9 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS27945 4d3c99bfef1d234c961d169f8a0ea9a8 55 Pfam PF00301 Rubredoxin 3 49 4.0E-23 T 26-04-2016 IPR024935 Rubredoxin domain GO:0005506 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 PANTHER PTHR24222 11 557 1.3E-301 T 26-04-2016 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 Pfam PF00664 ABC transporter transmembrane region 28 283 7.5E-14 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 556 2.5E-231 T 26-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 Gene3D G3DSA:1.20.1560.10 12 318 6.7E-42 T 26-04-2016 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 SUPERFAMILY SSF52540 324 557 8.88E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 SUPERFAMILY SSF90123 8 324 3.14E-45 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 PANTHER PTHR24222:SF0 11 557 1.3E-301 T 26-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 Gene3D G3DSA:3.40.50.300 331 558 6.2E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 Pfam PF00005 ABC transporter 349 496 8.7E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08015 8449813904f4e4c12f71f99b4ea5af17 596 SMART SM00382 358 543 2.0E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS17285 15f016a84706a87f90eb0783d3d83d02 185 PANTHER PTHR35562:SF2 1 185 1.4E-85 T 26-04-2016 PAM18_RS17285 15f016a84706a87f90eb0783d3d83d02 185 SMART SM00463 92 176 1.0E-8 T 26-04-2016 IPR002625 Smr domain PAM18_RS17285 15f016a84706a87f90eb0783d3d83d02 185 Pfam PF01713 Smr domain 95 176 2.0E-21 T 26-04-2016 IPR002625 Smr domain PAM18_RS17285 15f016a84706a87f90eb0783d3d83d02 185 PANTHER PTHR35562 1 185 1.4E-85 T 26-04-2016 PAM18_RS17285 15f016a84706a87f90eb0783d3d83d02 185 SUPERFAMILY SSF160443 94 176 1.7E-15 T 26-04-2016 IPR002625 Smr domain PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Pfam PF02321 Outer membrane efflux protein 296 472 1.3E-18 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Pfam PF02321 Outer membrane efflux protein 73 263 6.1E-23 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 SUPERFAMILY SSF56954 64 478 3.01E-97 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 SUPERFAMILY SSF56954 9 39 3.01E-97 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 474 8.1E-126 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Gene3D G3DSA:2.20.200.10 324 359 7.0E-18 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Gene3D G3DSA:2.20.200.10 110 150 7.0E-18 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Gene3D G3DSA:1.20.1600.10 151 323 1.9E-90 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Gene3D G3DSA:1.20.1600.10 361 475 1.9E-90 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 Gene3D G3DSA:1.20.1600.10 59 99 1.9E-90 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 PANTHER PTHR30203 1 491 5.2E-225 T 26-04-2016 PAM18_RS26970 7a3145defaa101429eed0f7d9ed150dc 492 PANTHER PTHR30203:SF6 1 491 5.2E-225 T 26-04-2016 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 1.8E-110 T 26-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 PANTHER PTHR30578 3 403 1.3E-255 T 26-04-2016 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.626 T 26-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 PIRSF PIRSF016055 1 403 2.0E-204 T 26-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 PANTHER PTHR30578:SF1 3 403 1.3E-255 T 26-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10080 093caa195848d9a6f5173344849079dc 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 1.0E-197 T 26-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 314 8.1E-23 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 SMART SM00382 31 230 3.1E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 SUPERFAMILY SSF52540 3 251 3.99E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.2E-16 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 PANTHER PTHR24220 5 323 2.6E-212 T 26-04-2016 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 Gene3D G3DSA:3.40.50.300 3 258 1.1E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF00005 ABC transporter 23 180 8.3E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23475 ec05d4e6936aae96725f4ec385df6fea 324 PANTHER PTHR24220:SF576 5 323 2.6E-212 T 26-04-2016 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 8 725 4.9E-273 T 26-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 Pfam PF04185 Phosphoesterase family 51 436 3.4E-125 T 26-04-2016 IPR007312 Phosphoesterase GO:0016788 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 PANTHER PTHR31956:SF6 6 594 0.0 T 26-04-2016 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 PANTHER PTHR31956 6 594 0.0 T 26-04-2016 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 Pfam PF05506 Domain of unknown function (DUF756) 629 712 9.7E-19 T 26-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS21430 0edb189f94fbfd3256ae9d9a2dc3302d 730 Pfam PF05506 Domain of unknown function (DUF756) 512 619 5.8E-14 T 26-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 Gene3D G3DSA:3.20.20.70 4 291 2.6E-91 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 PANTHER PTHR10277 2 296 1.0E-178 T 26-04-2016 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 SUPERFAMILY SSF51569 1 289 5.49E-73 T 26-04-2016 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 PANTHER PTHR10277:SF40 2 296 1.0E-178 T 26-04-2016 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 Pfam PF00682 HMGL-like 6 278 1.7E-53 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PAM18_RS15555 a097d21f1311c4379d8d36dfaf40c6eb 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 26-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 350 7.1E-83 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 Pfam PF14310 Fibronectin type III-like domain 685 753 7.5E-22 T 26-04-2016 IPR026891 Fibronectin type III-like domain PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 165 181 2.9E-22 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 119 138 2.9E-22 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 2.9E-22 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 116 2.9E-22 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 272 290 2.9E-22 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 394 647 1.2E-59 T 26-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 SUPERFAMILY SSF52279 494 650 5.23E-60 T 26-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 SUPERFAMILY SSF52279 394 463 5.23E-60 T 26-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PANTHER PTHR30620:SF5 486 764 0.0 T 26-04-2016 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PANTHER PTHR30620:SF5 1 470 0.0 T 26-04-2016 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PANTHER PTHR30620 486 764 0.0 T 26-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 PANTHER PTHR30620 1 470 0.0 T 26-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 Gene3D G3DSA:3.20.20.300 33 365 2.3E-101 T 26-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 272 289 - T 26-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 SMART SM01217 684 753 1.8E-30 T 26-04-2016 IPR026891 Fibronectin type III-like domain PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 Gene3D G3DSA:3.40.50.1700 382 650 3.6E-80 T 26-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PAM18_RS17025 4b80233227391594a1be0467e7db78f8 764 SUPERFAMILY SSF51445 32 392 1.68E-98 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 PANTHER PTHR30011 1 378 3.4E-221 T 26-04-2016 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 71.118 T 26-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 Gene3D G3DSA:3.20.20.30 3 253 4.4E-102 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 Gene3D G3DSA:3.20.20.30 287 350 4.4E-102 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 7.5E-85 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 PANTHER PTHR30011:SF1 1 378 3.4E-221 T 26-04-2016 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 4.6E-192 T 26-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 PAM18_RS07820 a773e670abe051054bee1690f59ce8d3 382 SUPERFAMILY SSF51679 3 349 1.06E-96 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 Gene3D G3DSA:2.60.260.20 1 70 7.4E-14 T 26-04-2016 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 SUPERFAMILY SSF69737 73 139 7.98E-22 T 26-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 Gene3D G3DSA:3.30.70.790 73 144 1.8E-33 T 26-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 66 5.3E-21 T 26-04-2016 IPR004029 UreE urease accessory, N-terminal PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 150 3.6E-28 T 26-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 SMART SM00988 1 66 2.9E-24 T 26-04-2016 IPR004029 UreE urease accessory, N-terminal PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 SUPERFAMILY SSF69287 1 71 1.23E-16 T 26-04-2016 IPR004029 UreE urease accessory, N-terminal PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 24.207 T 26-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PAM18_RS25600 8e1703156a0c8c2e1327bcfa813ef313 167 PIRSF PIRSF036402 1 151 4.6E-52 T 26-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 PAM18_RS23555 ecb9976e8d23c0e144bb945372684306 278 PANTHER PTHR38684 2 277 3.9E-98 T 26-04-2016 PAM18_RS05540 135430772ea03bf043700d3ca196c144 180 Gene3D G3DSA:3.40.50.850 2 176 5.3E-53 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05540 135430772ea03bf043700d3ca196c144 180 SUPERFAMILY SSF52499 2 178 3.14E-46 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05540 135430772ea03bf043700d3ca196c144 180 PANTHER PTHR14119 2 176 1.1E-63 T 26-04-2016 PAM18_RS05540 135430772ea03bf043700d3ca196c144 180 Pfam PF00857 Isochorismatase family 8 156 6.8E-26 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 SUPERFAMILY SSF56112 18 225 1.8E-22 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 PANTHER PTHR10593 5 274 1.6E-143 T 26-04-2016 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 Gene3D G3DSA:3.30.200.20 17 125 5.9E-14 T 26-04-2016 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 SMART SM00090 2 234 5.3E-16 T 26-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 Gene3D G3DSA:1.10.510.10 139 225 2.9E-19 T 26-04-2016 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 26-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 Pfam PF01163 RIO1 family 31 222 1.2E-47 T 26-04-2016 PAM18_RS25035 354119ae61cd8ce77c3840c3d418c39b 297 PANTHER PTHR10593:SF19 5 274 1.6E-143 T 26-04-2016 PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.3E-65 T 26-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 PANTHER PTHR36837 1 560 0.0 T 26-04-2016 PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 Gene3D G3DSA:3.40.50.1820 159 531 3.6E-56 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 PANTHER PTHR36837:SF2 1 560 0.0 T 26-04-2016 PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 560 0.0 T 26-04-2016 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PAM18_RS26455 8dca035436750d5ebd57cf7bc2ebdf52 560 SUPERFAMILY SSF53474 201 492 6.01E-32 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF52172 11 143 4.55E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00448 12 125 3.8E-34 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 Gene3D G3DSA:3.40.50.2300 11 156 2.3E-41 T 26-04-2016 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.0E-21 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 Gene3D G3DSA:1.10.10.10 157 218 1.9E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 PANTHER PTHR26402:SF555 12 217 1.7E-133 T 26-04-2016 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF46894 146 218 1.84E-22 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00072 Response regulator receiver domain 15 126 7.9E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 PANTHER PTHR26402 12 217 1.7E-133 T 26-04-2016 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00421 156 213 8.2E-28 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.1E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.1E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05395 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.1E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 SUPERFAMILY SSF50891 95 223 1.33E-40 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 Gene3D G3DSA:3.30.1360.40 7 85 1.0E-11 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 SMART SM00796 6 207 3.0E-84 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 SUPERFAMILY SSF160467 7 97 1.03E-12 T 26-04-2016 PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 PANTHER PTHR34698 1 237 3.2E-100 T 26-04-2016 PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 Gene3D G3DSA:2.40.100.10 95 227 2.0E-45 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 PANTHER PTHR34698:SF2 1 237 3.2E-100 T 26-04-2016 PAM18_RS15045 ed980dcf7d2cea485d3039a9eb25edd7 237 Pfam PF02682 Allophanate hydrolase subunit 1 7 205 2.5E-60 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 Pfam PF08402 TOBE domain 276 356 7.7E-16 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 PANTHER PTHR24220:SF532 3 253 3.5E-185 T 26-04-2016 PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 SMART SM00382 26 209 6.2E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 32 352 1.9E-117 T 26-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 Pfam PF00005 ABC transporter 17 159 7.4E-37 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 PANTHER PTHR24220 3 253 3.5E-185 T 26-04-2016 PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 SUPERFAMILY SSF52540 1 239 4.82E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 SUPERFAMILY SSF50331 235 356 1.81E-17 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 Gene3D G3DSA:3.40.50.300 1 232 3.8E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07095 d9f0244e86515e0ba89b18e2f3c1c788 359 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 Gene3D G3DSA:1.10.1240.20 6 93 1.3E-47 T 26-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 Gene3D G3DSA:1.20.910.10 104 326 3.6E-60 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 1 93 6.2E-51 T 26-04-2016 IPR029474 Haem-oxygenase-associated, N-terminal helices PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 SMART SM01236 174 276 3.7E-21 T 26-04-2016 PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 SUPERFAMILY SSF48613 107 321 5.72E-25 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS07555 aa36c6781f69877ab73fe1e86b68288e 328 Pfam PF14518 Iron-containing redox enzyme 159 276 6.5E-14 T 26-04-2016 IPR028201 PqqC-like protein PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF00589 Phage integrase family 113 283 5.0E-52 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 3.2E-19 T 26-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 SUPERFAMILY SSF56349 8 288 2.21E-59 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 PANTHER PTHR30349:SF5 1 297 5.1E-124 T 26-04-2016 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 297 1.8E-119 T 26-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.443.10 113 289 8.1E-59 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 298 31.326 T 26-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 PANTHER PTHR30349 1 297 5.1E-124 T 26-04-2016 PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.150.130 7 100 1.3E-28 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal PAM18_RS06115 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 65.88 T 26-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 SMART SM00342 245 327 9.2E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 Gene3D G3DSA:1.10.10.10 231 295 6.1E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 PANTHER PTHR11019:SF52 230 335 1.3E-31 T 26-04-2016 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 SUPERFAMILY SSF46689 280 329 2.11E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 41 198 3.8E-15 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 Pfam PF12833 Helix-turn-helix domain 251 328 3.1E-18 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 PANTHER PTHR11019 230 335 1.3E-31 T 26-04-2016 PAM18_RS12350 e1b690c0ad3ab50f52300ce40bcaf9a4 342 Gene3D G3DSA:1.10.10.60 296 330 1.8E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 227 3.5E-17 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 SUPERFAMILY SSF111369 41 184 2.09E-21 T 26-04-2016 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 Gene3D G3DSA:2.40.50.100 151 184 4.8E-18 T 26-04-2016 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 Gene3D G3DSA:2.40.50.100 46 78 4.8E-18 T 26-04-2016 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 PANTHER PTHR30367 1 291 1.1E-95 T 26-04-2016 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 PANTHER PTHR30367:SF5 1 291 1.1E-95 T 26-04-2016 PAM18_RS19435 5fe74f8e95e1769be4a12dfe7e900ca4 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 213 7.9E-34 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 Pfam PF00782 Dual specificity phosphatase, catalytic domain 359 430 1.7E-8 T 26-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 SUPERFAMILY SSF52799 296 429 4.49E-19 T 26-04-2016 IPR029021 Protein-tyrosine phosphatase-like PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 Gene3D G3DSA:3.90.190.10 288 434 6.5E-19 T 26-04-2016 IPR029021 Protein-tyrosine phosphatase-like PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 PANTHER PTHR10159 290 431 6.8E-41 T 26-04-2016 IPR024950 Dual specificity phosphatase PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 PANTHER PTHR10159 253 274 6.8E-41 T 26-04-2016 IPR024950 Dual specificity phosphatase PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 PANTHER PTHR10159:SF370 290 431 6.8E-41 T 26-04-2016 PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 PANTHER PTHR10159:SF370 253 274 6.8E-41 T 26-04-2016 PAM18_RS12885 30721f750124d7f0e90f66ac9e21b397 449 SMART SM00195 302 435 3.7E-6 T 26-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 6.0E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 6.0E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 6.0E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 6.0E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PANTHER PTHR18901 1 253 2.2E-82 T 26-04-2016 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 2.0E-35 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 227 5.5E-68 T 26-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 Gene3D G3DSA:3.40.50.1000 10 29 2.3E-44 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 Gene3D G3DSA:3.40.50.1000 88 211 2.3E-44 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 SUPERFAMILY SSF56784 13 226 1.06E-59 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 Gene3D G3DSA:1.10.150.240 30 87 7.6E-25 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 194 7.4E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 197 2.2E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 230 37.939 T 26-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 PAM18_RS03080 2e305303c2a1be34a60be601e9426456 272 PANTHER PTHR18901:SF14 1 253 2.2E-82 T 26-04-2016 PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 PANTHER PTHR23416:SF55 1 206 1.0E-86 T 26-04-2016 PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 SUPERFAMILY SSF51161 42 206 6.1E-32 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 Gene3D G3DSA:1.10.3130.10 30 80 3.1E-9 T 26-04-2016 PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 PANTHER PTHR23416 1 206 1.0E-86 T 26-04-2016 PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 Gene3D G3DSA:2.160.10.10 105 215 2.5E-24 T 26-04-2016 PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 150 4.6E-5 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS15075 d7afae91ba82f343714a8b0a8a291535 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 3.3E-9 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 364 493 2.9E-32 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 31 142 2.1E-8 T 26-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 SUPERFAMILY SSF55904 359 502 4.84E-23 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 SUPERFAMILY SSF53383 241 356 1.19E-12 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 Gene3D G3DSA:3.90.1150.10 221 380 8.9E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 262 336 1.0E-15 T 26-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 PAM18_RS18215 5e95ca10a2b69577e497fd23068a4310 521 Gene3D G3DSA:3.90.100.10 381 502 6.7E-21 T 26-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 5.6E-37 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 5.6E-37 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 5.6E-37 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 5.6E-37 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PANTHER PTHR36918 1 163 4.0E-89 T 26-04-2016 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 Gene3D G3DSA:3.10.420.10 11 154 1.1E-56 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 PANTHER PTHR36918:SF1 1 163 4.0E-89 T 26-04-2016 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 Pfam PF02556 Preprotein translocase subunit SecB 11 150 2.3E-54 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 33.454 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 147 1.6E-54 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS26800 3267b9739b18c5a9b84a12c3c68e887c 163 SUPERFAMILY SSF54611 8 148 7.19E-53 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 1.5E-23 T 26-04-2016 IPR024478 4HB MCP domain PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 Gene3D G3DSA:1.10.287.950 293 511 3.1E-59 T 26-04-2016 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 SUPERFAMILY SSF58104 232 540 1.18E-76 T 26-04-2016 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 SMART SM00304 265 317 29.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 SMART SM00304 212 264 2.1E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 539 9.5E-51 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 7.3E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 7.3E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 7.3E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 7.3E-24 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PANTHER PTHR32089 133 541 9.8E-141 T 26-04-2016 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 SMART SM00283 279 540 6.3E-80 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 Pfam PF00672 HAMP domain 193 261 3.1E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS17625 117c6b377cedb400487a41c8115a0082 541 PANTHER PTHR32089:SF64 133 541 9.8E-141 T 26-04-2016 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 PANTHER PTHR24064:SF234 10 438 5.4E-208 T 26-04-2016 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 Pfam PF07690 Major Facilitator Superfamily 35 405 1.3E-43 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 SUPERFAMILY SSF103473 14 437 8.76E-79 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 13 412 5.0E-152 T 26-04-2016 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 PANTHER PTHR24064 10 438 5.4E-208 T 26-04-2016 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 Gene3D G3DSA:1.20.1250.20 23 209 3.4E-38 T 26-04-2016 PAM18_RS01165 7c98cdb54f5c17112a52f9ab58db17ba 448 Gene3D G3DSA:1.20.1250.20 264 419 3.9E-24 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Gene3D G3DSA:3.30.420.40 87 201 7.8E-9 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 SUPERFAMILY SSF53067 5 192 5.83E-65 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 169.52 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PANTHER PTHR21060:SF15 2 394 1.7E-247 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Gene3D G3DSA:3.30.420.40 202 392 4.0E-67 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 170 183 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 319 335 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 200 221 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 374 386 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 297 310 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PRINTS PR00471 Acetate kinase family signature 6 17 6.4E-43 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 26-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PIRSF PIRSF000722 2 394 3.8E-131 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 TIGRFAM TIGR00016 ackA: acetate kinase 3 392 5.2E-133 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 Pfam PF00871 Acetokinase family 6 386 4.0E-133 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 SUPERFAMILY SSF53067 153 393 1.11E-82 T 26-04-2016 PAM18_RS21470 35ab8e1725d3fcd7aa1fa4b3eb442af8 394 PANTHER PTHR21060 2 394 1.7E-247 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 220 1.9E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 PANTHER PTHR30614:SF1 1 221 6.0E-137 T 26-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 PANTHER PTHR30614 1 221 6.0E-137 T 26-04-2016 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 114 4.0E-25 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 SUPERFAMILY SSF161098 11 205 2.09E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18245 9edcd64a8758d0371981273610630b4a 221 Gene3D G3DSA:1.10.3720.10 10 219 5.1E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 Pfam PF02613 Nitrate reductase delta subunit 39 161 6.2E-12 T 26-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 PANTHER PTHR30598:SF1 7 219 9.8E-79 T 26-04-2016 PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 PANTHER PTHR30598 7 219 9.8E-79 T 26-04-2016 PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 Gene3D G3DSA:1.10.3480.10 2 128 1.1E-7 T 26-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 13 164 2.1E-35 T 26-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 PAM18_RS05425 9b6a6d035f741195277fd29bd15caf20 246 SUPERFAMILY SSF89155 6 166 2.88E-30 T 26-04-2016 IPR020945 DMSO/Nitrate reductase chaperone PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 3.0E-120 T 26-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 26-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF56059 3 384 1.77E-108 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.50.30.10 373 467 6.5E-35 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF51621 461 786 1.05E-99 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PANTHER PTHR22931 2 266 0.0 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PANTHER PTHR22931 282 786 0.0 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 1.4E-62 T 26-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF52009 347 464 5.36E-34 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.20.20.60 481 785 3.3E-105 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.30.470.20 196 356 7.8E-61 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PANTHER PTHR22931:SF7 2 266 0.0 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PANTHER PTHR22931:SF7 282 786 0.0 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 6.1E-26 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 786 0.0 T 26-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 26-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 7.8E-6 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 7.8E-6 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 7.8E-6 T 26-04-2016 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 PIRSF PIRSF000854 1 791 0.0 T 26-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 PAM18_RS16800 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.30.1490.20 3 192 2.8E-68 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS04985 399f01d85b483436b763a6be0cbb7a13 244 SUPERFAMILY SSF53850 32 238 5.43E-23 T 26-04-2016 PAM18_RS04985 399f01d85b483436b763a6be0cbb7a13 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 238 7.0E-6 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS04985 399f01d85b483436b763a6be0cbb7a13 244 Gene3D G3DSA:3.40.190.10 30 98 3.7E-6 T 26-04-2016 PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 34.652 T 26-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 SUPERFAMILY SSF52540 7 223 1.12E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 Gene3D G3DSA:3.40.50.300 6 223 1.2E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 Pfam PF02224 Cytidylate kinase 9 223 5.6E-77 T 26-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 220 6.4E-82 T 26-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 PAM18_RS09270 a99d31932c41b9129231357bbcd70d8f 229 PANTHER PTHR21299 5 229 1.1E-80 T 26-04-2016 PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 Gene3D G3DSA:3.40.50.720 6 254 3.8E-76 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 201 0.0053 T 26-04-2016 PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.9E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PANTHER PTHR24322 14 149 5.4E-51 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PANTHER PTHR24322 166 198 5.4E-51 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 SUPERFAMILY SSF51735 9 253 3.08E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 251 8.4E-60 T 26-04-2016 PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28855 5a462220a81381fb4c029488aae1e211 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.2E-13 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS06265 5af37780558662abb53561c0e387913a 539 PANTHER PTHR23508:SF7 15 341 1.2E-247 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 PANTHER PTHR23508:SF7 440 539 1.2E-247 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 Gene3D G3DSA:1.20.1250.20 21 222 2.0E-22 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 Gene3D G3DSA:1.20.1250.20 438 535 3.6E-22 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 Gene3D G3DSA:1.20.1250.20 251 339 3.6E-22 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 SUPERFAMILY SSF103473 442 535 1.92E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS06265 5af37780558662abb53561c0e387913a 539 SUPERFAMILY SSF103473 19 340 1.92E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS06265 5af37780558662abb53561c0e387913a 539 Pfam PF00083 Sugar (and other) transporter 25 236 9.3E-29 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 PANTHER PTHR23508 15 341 1.2E-247 T 26-04-2016 PAM18_RS06265 5af37780558662abb53561c0e387913a 539 PANTHER PTHR23508 440 539 1.2E-247 T 26-04-2016 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 Gene3D G3DSA:2.30.330.10 240 322 1.3E-9 T 26-04-2016 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PIRSF PIRSF002888 3 323 1.5E-91 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF103039 55 230 1.28E-19 T 26-04-2016 IPR028976 CheC-like domain PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF103039 6 15 1.28E-19 T 26-04-2016 IPR028976 CheC-like domain PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.4E-21 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.4E-21 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.4E-21 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 3.4E-21 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PANTHER PTHR30034 4 323 1.4E-152 T 26-04-2016 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 319 2.3E-109 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF02154 Flagellar motor switch protein FliM 38 229 4.2E-75 T 26-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 1.1E-16 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF101801 247 322 3.14E-14 T 26-04-2016 IPR001543 Surface presentation of antigen (SpoA) PAM18_RS18870 cd00c6d6044b70d67ce0592151621b7f 323 PANTHER PTHR30034:SF0 4 323 1.4E-152 T 26-04-2016 PAM18_RS08280 99f8c2891a41945fc19cbcf4f838babe 203 Gene3D G3DSA:3.90.550.10 24 184 3.7E-13 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS08280 99f8c2891a41945fc19cbcf4f838babe 203 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 8 193 1.9E-40 T 26-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated PAM18_RS08280 99f8c2891a41945fc19cbcf4f838babe 203 PANTHER PTHR36529 1 199 7.5E-54 T 26-04-2016 PAM18_RS08280 99f8c2891a41945fc19cbcf4f838babe 203 SUPERFAMILY SSF53448 16 199 1.13E-26 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS08280 99f8c2891a41945fc19cbcf4f838babe 203 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 45 159 3.2E-29 T 26-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:3.40.190.10 186 242 9.5E-5 T 26-04-2016 PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF03466 LysR substrate binding domain 91 285 3.2E-36 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF46785 1 111 8.77E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:3.40.190.10 91 185 4.2E-19 T 26-04-2016 PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 PANTHER PTHR30126:SF12 1 299 1.3E-145 T 26-04-2016 PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-14 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:1.10.10.10 1 85 5.6E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 PANTHER PTHR30126 1 299 1.3E-145 T 26-04-2016 PAM18_RS06255 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF53850 91 288 5.12E-37 T 26-04-2016 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 Gene3D G3DSA:1.10.760.10 124 224 3.2E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 PANTHER PTHR31632 362 595 7.1E-35 T 26-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 PANTHER PTHR31632:SF4 362 595 7.1E-35 T 26-04-2016 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 SUPERFAMILY SSF46626 119 223 4.01E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 130 213 2.2E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27430 38bb3a57a8bac9bd31d4027e9e90261c 633 Pfam PF03239 Iron permease FTR1 family 375 577 9.9E-16 T 26-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 85 105 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 106 126 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.2E-42 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PANTHER PTHR30295 1 154 4.7E-99 T 26-04-2016 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.1E-48 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 Gene3D G3DSA:1.20.1260.10 1 154 3.6E-56 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 Pfam PF00210 Ferritin-like domain 8 144 5.3E-38 T 26-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 SUPERFAMILY SSF47240 1 154 1.74E-46 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PIRSF PIRSF002560 1 154 2.4E-63 T 26-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 PAM18_RS03565 1bd2083a5bf30f99273964692f7c5415 154 PANTHER PTHR30295:SF9 1 154 4.7E-99 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 PANTHER PTHR30069 15 908 1.8E-275 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Pfam PF07660 Secretin and TonB N terminus short domain 66 113 4.1E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 PANTHER PTHR30069:SF7 15 908 1.8E-275 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Pfam PF00593 TonB dependent receptor 662 981 6.3E-32 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 SMART SM00965 64 114 8.3E-12 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Gene3D G3DSA:2.40.170.20 805 983 2.4E-72 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Gene3D G3DSA:2.40.170.20 272 331 2.4E-72 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Gene3D G3DSA:2.40.170.20 372 771 2.4E-72 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 268 8.9E-23 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 SUPERFAMILY SSF56935 137 333 1.65E-94 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 SUPERFAMILY SSF56935 396 525 1.65E-94 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 SUPERFAMILY SSF56935 809 983 1.65E-94 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 SUPERFAMILY SSF56935 559 769 1.65E-94 T 26-04-2016 PAM18_RS15320 ec61cac36c8218f5e23d3aa114867292 985 Gene3D G3DSA:2.170.130.10 129 271 1.3E-36 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS04640 ed07901e7f2a93a4bdc026897b00aff0 527 SUPERFAMILY SSF56112 283 489 1.66E-10 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS04640 ed07901e7f2a93a4bdc026897b00aff0 527 Gene3D G3DSA:1.10.510.10 326 479 2.9E-4 T 26-04-2016 PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 PANTHER PTHR12110 1 258 1.3E-105 T 26-04-2016 PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 Gene3D G3DSA:3.20.20.150 1 259 7.9E-95 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 217 1.0E-35 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 PANTHER PTHR12110:SF3 1 258 1.3E-105 T 26-04-2016 PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 SUPERFAMILY SSF51658 1 258 4.84E-86 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS02785 eb4cd66b8b61c8866fe78ad31a6a8959 265 PIRSF PIRSF006241 1 262 1.7E-95 T 26-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PAM18_RS27250 a2f6744c59b397f77c6ed6e71cab90fe 109 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 100 5.9E-34 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS27250 a2f6744c59b397f77c6ed6e71cab90fe 109 Pfam PF09498 Protein of unknown function (DUF2388) 31 100 1.9E-32 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS23400 ec64883e1c2dccfd7ad4455f88aa7242 216 Gene3D G3DSA:3.90.1720.10 55 174 3.2E-7 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS23400 ec64883e1c2dccfd7ad4455f88aa7242 216 Pfam PF06672 Protein of unknown function (DUF1175) 25 214 2.0E-77 T 26-04-2016 IPR009558 Protein of unknown function DUF1175 PAM18_RS17055 988e1490f8c4a04bd74ba9d2ca304236 115 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 115 8.0E-57 T 26-04-2016 IPR013348 Type III secretion system YscG GO:0009405 PAM18_RS17055 988e1490f8c4a04bd74ba9d2ca304236 115 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 114 2.0E-42 T 26-04-2016 IPR013348 Type III secretion system YscG GO:0009405 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 2.0E-80 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF48179 162 270 1.87E-35 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 6.2E-38 T 26-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 PANTHER PTHR11645 1 273 8.2E-116 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 PANTHER PTHR11645:SF0 1 273 8.2E-116 T 26-04-2016 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 27.612 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 PIRSF PIRSF000193 3 270 2.7E-83 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:3.40.50.720 3 159 4.2E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.2E-23 T 26-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:1.10.3730.10 162 267 4.8E-39 T 26-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 PAM18_RS01990 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF51735 5 160 8.86E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:2.40.10.10 115 212 2.1E-6 T 26-04-2016 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:2.40.10.10 213 331 2.3E-14 T 26-04-2016 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 Gene3D G3DSA:3.40.570.10 382 603 3.3E-40 T 26-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 SUPERFAMILY SSF54060 386 601 2.41E-45 T 26-04-2016 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 SMART SM00477 397 604 1.2E-14 T 26-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 SMART SM00892 396 604 4.5E-57 T 26-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 134 151 9.4E-11 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 282 298 9.4E-11 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 PRINTS PR00839 V8 serine protease family signature 300 312 9.4E-11 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 SUPERFAMILY SSF50494 107 330 1.01E-24 T 26-04-2016 IPR009003 Peptidase S1, PA clan PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 Pfam PF01223 DNA/RNA non-specific endonuclease 390 603 3.9E-51 T 26-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 Pfam PF13365 Trypsin-like peptidase domain 134 308 3.6E-17 T 26-04-2016 PAM18_RS18310 3f5d2e99b95507b37fbb49a6a069119f 642 PANTHER PTHR13966 380 640 3.8E-43 T 26-04-2016 PAM18_RS03050 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 308 1.4E-43 T 26-04-2016 PAM18_RS03050 b0e42e9ec29f0151a7ef2d2153b28b9f 344 PANTHER PTHR30222:SF2 5 344 3.4E-173 T 26-04-2016 PAM18_RS03050 b0e42e9ec29f0151a7ef2d2153b28b9f 344 PANTHER PTHR30222 5 344 3.4E-173 T 26-04-2016 PAM18_RS03050 b0e42e9ec29f0151a7ef2d2153b28b9f 344 SUPERFAMILY SSF53850 25 341 7.76E-65 T 26-04-2016 PAM18_RS03050 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Gene3D G3DSA:3.40.190.10 126 285 8.3E-33 T 26-04-2016 PAM18_RS05135 b286f54d9611c128e9b36384236c1e65 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.1E-103 T 26-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PAM18_RS05135 b286f54d9611c128e9b36384236c1e65 335 PIRSF PIRSF000267 2 335 2.6E-96 T 26-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PAM18_RS05135 b286f54d9611c128e9b36384236c1e65 335 PANTHER PTHR30365:SF4 1 335 1.7E-198 T 26-04-2016 PAM18_RS05135 b286f54d9611c128e9b36384236c1e65 335 PANTHER PTHR30365 1 335 1.7E-198 T 26-04-2016 PAM18_RS05135 b286f54d9611c128e9b36384236c1e65 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 1.6E-48 T 26-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 SUPERFAMILY SSF51905 11 266 3.66E-16 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 Gene3D G3DSA:3.50.50.60 274 353 4.9E-6 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 Gene3D G3DSA:3.50.50.60 213 241 4.9E-6 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 Gene3D G3DSA:3.50.50.60 95 212 1.8E-9 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 PANTHER PTHR23024 57 167 1.5E-41 T 26-04-2016 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 SUPERFAMILY SSF51905 207 245 3.02E-5 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 SUPERFAMILY SSF51905 286 391 3.02E-5 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 357 7.2E-121 T 26-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 PANTHER PTHR23024:SF214 57 167 1.5E-41 T 26-04-2016 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 9.2E-5 T 26-04-2016 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 9.2E-5 T 26-04-2016 PAM18_RS13655 50f035532bbec99d446875dc8ebeff80 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 209 227 9.2E-5 T 26-04-2016 PAM18_RS29130 e062a788c27d06d56d2408671c397d2a 230 PANTHER PTHR23514 1 225 1.3E-51 T 26-04-2016 PAM18_RS29130 e062a788c27d06d56d2408671c397d2a 230 SUPERFAMILY SSF103473 8 220 2.22E-26 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS29130 e062a788c27d06d56d2408671c397d2a 230 Gene3D G3DSA:1.20.1250.20 47 217 5.5E-18 T 26-04-2016 PAM18_RS29130 e062a788c27d06d56d2408671c397d2a 230 Pfam PF07690 Major Facilitator Superfamily 70 217 1.5E-12 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS29130 e062a788c27d06d56d2408671c397d2a 230 PANTHER PTHR23514:SF13 1 225 1.3E-51 T 26-04-2016 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 Pfam PF03466 LysR substrate binding domain 92 301 4.0E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 3.1E-13 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 Gene3D G3DSA:3.40.190.10 182 264 7.1E-22 T 26-04-2016 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 PANTHER PTHR30126 8 315 1.7E-145 T 26-04-2016 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 PANTHER PTHR30126:SF12 8 315 1.7E-145 T 26-04-2016 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 SUPERFAMILY SSF46785 10 115 8.05E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 Gene3D G3DSA:1.10.10.10 11 87 2.0E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 SUPERFAMILY SSF53850 93 302 7.24E-37 T 26-04-2016 PAM18_RS10850 1644805831acaaef9a1903ccf35df300 318 Gene3D G3DSA:3.40.190.10 96 181 1.2E-18 T 26-04-2016 PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 Pfam PF12805 FUSC-like inner membrane protein yccS 70 354 3.9E-115 T 26-04-2016 IPR032692 Integral membrane protein YccS, N-terminal PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 PANTHER PTHR30509 5 686 0.0 T 26-04-2016 PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 Pfam PF13515 Fusaric acid resistance protein-like 413 529 2.0E-21 T 26-04-2016 PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 717 0.0 T 26-04-2016 IPR010020 Integral membrane protein, YccS/YhfK PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 PANTHER PTHR30509:SF8 5 686 0.0 T 26-04-2016 PAM18_RS02290 1f81e621d08579911047ff9a5b9ecb98 733 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 715 4.7E-235 T 26-04-2016 IPR010019 Integral membrane protein, YccS PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 26-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 PANTHER PTHR30446:SF0 1 198 1.5E-111 T 26-04-2016 PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.1E-72 T 26-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 Pfam PF13662 Toprim domain 81 170 1.0E-23 T 26-04-2016 IPR006171 Toprim domain PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 Pfam PF02132 RecR protein 41 78 2.2E-16 T 26-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 101.113 T 26-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 SUPERFAMILY SSF111304 3 197 4.45E-70 T 26-04-2016 IPR023627 Recombination protein RecR PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 SMART SM00493 80 164 1.5E-14 T 26-04-2016 IPR006171 Toprim domain PAM18_RS18005 13cb6d4b99de632e187177daff6ff097 198 PANTHER PTHR30446 1 198 1.5E-111 T 26-04-2016 PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SUPERFAMILY SSF52821 3 101 5.37E-28 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Pfam PF00581 Rhodanese-like domain 10 97 2.0E-16 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 PANTHER PTHR12231 2 98 3.0E-12 T 26-04-2016 PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Gene3D G3DSA:3.40.250.10 4 98 3.1E-27 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 3 106 29.846 T 26-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PAM18_RS02985 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SMART SM00450 8 102 2.5E-20 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS01180 34679d82426ea6b4bcfb577b50de0eb5 271 Gene3D G3DSA:3.20.20.150 6 270 2.2E-38 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS01180 34679d82426ea6b4bcfb577b50de0eb5 271 PANTHER PTHR12110 1 271 3.8E-118 T 26-04-2016 PAM18_RS01180 34679d82426ea6b4bcfb577b50de0eb5 271 PANTHER PTHR12110:SF26 1 271 3.8E-118 T 26-04-2016 PAM18_RS01180 34679d82426ea6b4bcfb577b50de0eb5 271 SUPERFAMILY SSF51658 5 270 2.02E-61 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS01180 34679d82426ea6b4bcfb577b50de0eb5 271 Pfam PF01261 Xylose isomerase-like TIM barrel 22 221 6.0E-16 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 SUPERFAMILY SSF56322 66 390 1.07E-66 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Pfam PF00425 chorismate binding enzyme 122 381 5.3E-47 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PANTHER PTHR11236 93 471 3.6E-274 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 4.6E-25 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Gene3D G3DSA:3.60.120.10 91 392 1.9E-60 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Gene3D G3DSA:3.40.50.880 436 619 1.4E-26 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PANTHER PTHR11236:SF2 93 471 3.6E-274 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 26-04-2016 PAM18_RS16085 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 SUPERFAMILY SSF56322 66 390 1.07E-66 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Pfam PF00425 chorismate binding enzyme 122 381 5.3E-47 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PANTHER PTHR11236 93 471 3.6E-274 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 4.6E-25 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Gene3D G3DSA:3.60.120.10 91 392 1.9E-60 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 Gene3D G3DSA:3.40.50.880 436 619 1.4E-26 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PANTHER PTHR11236:SF2 93 471 3.6E-274 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 26-04-2016 PAM18_RS03700 b1c7a3ebe3d5ad7cd399dee68de47cb7 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 26-04-2016 PAM18_RS10360 ed14201578d5e80c6ec08da5794ead08 1248 Pfam PF02514 CobN/Magnesium Chelatase 138 1231 0.0 T 26-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 PAM18_RS10360 ed14201578d5e80c6ec08da5794ead08 1248 PANTHER PTHR23304:SF96 26 1248 0.0 T 26-04-2016 PAM18_RS10360 ed14201578d5e80c6ec08da5794ead08 1248 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1246 0.0 T 26-04-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 PAM18_RS10360 ed14201578d5e80c6ec08da5794ead08 1248 PANTHER PTHR23304 26 1248 0.0 T 26-04-2016 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF53850 95 282 3.26E-26 T 26-04-2016 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 Pfam PF03466 LysR substrate binding domain 96 282 1.7E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:1.10.10.10 7 91 4.0E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF46785 7 116 1.68E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 191 238 9.0E-6 T 26-04-2016 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 95 190 3.4E-17 T 26-04-2016 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 PANTHER PTHR30579:SF6 2 283 2.8E-192 T 26-04-2016 PAM18_RS10860 0ca92ff476d439de2557d13290146450 284 PANTHER PTHR30579 2 283 2.8E-192 T 26-04-2016 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 6.2E-19 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 PANTHER PTHR26402 1 238 4.3E-106 T 26-04-2016 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 SUPERFAMILY SSF52172 1 180 8.09E-32 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 Gene3D G3DSA:1.10.10.10 135 232 1.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 SMART SM00448 1 119 1.3E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 Pfam PF00072 Response regulator receiver domain 3 119 7.3E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 Gene3D G3DSA:3.40.50.2300 1 134 5.2E-32 T 26-04-2016 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 SMART SM00862 155 231 1.3E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS04620 a7bb8974a8556c8be1d4c715258bdd61 238 PANTHER PTHR26402:SF405 1 238 4.3E-106 T 26-04-2016 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 Gene3D G3DSA:2.40.50.140 5 68 2.0E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 PANTHER PTHR11544 1 69 1.2E-33 T 26-04-2016 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 SMART SM00357 6 69 3.6E-27 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 PIRSF PIRSF002599 1 69 1.5E-22 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.5E-27 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 SUPERFAMILY SSF50249 2 68 6.0E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 PRINTS PR00050 Cold shock protein signature 7 22 1.9E-16 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.9E-16 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.9E-16 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS12710 929224a5fb664d7a6e3b61e7b524d11f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF01381 Helix-turn-helix 8 59 1.4E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF51182 46 182 4.01E-27 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF07883 Cupin domain 108 175 1.1E-19 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 SMART SM00530 6 61 4.3E-14 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF47413 3 67 1.27E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 PANTHER PTHR10245 1 182 3.3E-113 T 26-04-2016 PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:2.60.120.10 73 180 3.4E-20 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 PANTHER PTHR10245:SF42 1 182 3.3E-113 T 26-04-2016 PAM18_RS27700 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:1.10.260.40 2 68 7.0E-22 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 486 2.0E-12 T 26-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PANTHER PTHR11985 12 500 2.7E-194 T 26-04-2016 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 2.3E-29 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 Pfam PF01266 FAD dependent oxidoreductase 16 369 2.4E-46 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 PANTHER PTHR11985:SF1 12 500 2.7E-194 T 26-04-2016 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 Gene3D G3DSA:3.50.50.60 15 266 7.8E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07210 49915b4b960784e19cc28647f04eaf7a 512 SUPERFAMILY SSF51905 15 306 7.93E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 PANTHER PTHR33516:SF2 1 204 4.3E-102 T 26-04-2016 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.413 T 26-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF01726 LexA DNA binding domain 1 65 1.8E-31 T 26-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:2.10.109.10 82 204 4.7E-44 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 1.89E-12 T 26-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 1.89E-12 T 26-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 1.89E-12 T 26-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF46785 3 70 1.7E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF00717 Peptidase S24-like 120 186 1.2E-14 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:1.10.10.10 1 69 1.4E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.5E-75 T 26-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF51306 82 203 6.8E-36 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS10035 f2ebaeb68fa7576cf01473b7f957f178 204 PANTHER PTHR33516 1 204 4.3E-102 T 26-04-2016 PAM18_RS16440 a12b767c3a1d27a9c1b3d2381a9c8910 145 SUPERFAMILY SSF54637 1 142 8.71E-29 T 26-04-2016 IPR029069 HotDog domain PAM18_RS16440 a12b767c3a1d27a9c1b3d2381a9c8910 145 Gene3D G3DSA:3.10.129.10 7 144 4.7E-56 T 26-04-2016 IPR029069 HotDog domain PAM18_RS16440 a12b767c3a1d27a9c1b3d2381a9c8910 145 Pfam PF14539 Domain of unknown function (DUF4442) 14 142 7.2E-52 T 26-04-2016 IPR027961 Protein of unknown function DUF4442 PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.9E-28 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 8.4E-28 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 8.5E-154 T 26-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-35 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.2E-35 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.2E-35 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-35 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PANTHER PTHR30012:SF6 2 405 2.4E-263 T 26-04-2016 PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 PANTHER PTHR30012 2 405 2.4E-263 T 26-04-2016 PAM18_RS09555 7225cd22d4f4d5036189328937d53be5 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 26-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.562 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.880 286 539 2.0E-98 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 Pfam PF06418 CTP synthase N-terminus 3 265 7.9E-125 T 26-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 5.5E-253 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52540 1 267 1.52E-121 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 Pfam PF00117 Glutamine amidotransferase class-I 300 533 2.8E-59 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 PANTHER PTHR11550 1 538 0.0 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52317 287 538 2.22E-88 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS06625 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.300 1 280 2.9E-132 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PANTHER PTHR24322 157 188 1.1E-55 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PANTHER PTHR24322 12 141 1.1E-55 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 Gene3D G3DSA:3.40.50.720 2 251 3.3E-88 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PANTHER PTHR24322:SF242 157 188 1.1E-55 T 26-04-2016 PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PANTHER PTHR24322:SF242 12 141 1.1E-55 T 26-04-2016 PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 SUPERFAMILY SSF51735 2 252 1.5E-83 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 5.6E-73 T 26-04-2016 PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17415 c6cce16c1f6a8729cb4306ac6e11e1a1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 SUPERFAMILY SSF49503 160 279 1.16E-18 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 Gene3D G3DSA:2.60.40.420 33 156 8.3E-32 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 SUPERFAMILY SSF49503 36 158 4.68E-35 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 ProSitePatterns PS00079 Multicopper oxidases signature 1. 435 455 - T 26-04-2016 IPR033138 Multicopper oxidases, conserved site PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 PANTHER PTHR11709:SF33 54 459 8.1E-104 T 26-04-2016 PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 SUPERFAMILY SSF49503 322 457 8.35E-32 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 ProSitePatterns PS00080 Multicopper oxidases signature 2. 440 451 - T 26-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 Pfam PF07731 Multicopper oxidase 358 458 6.4E-25 T 26-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 PANTHER PTHR11709 54 459 8.1E-104 T 26-04-2016 PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 Gene3D G3DSA:2.60.40.420 334 458 1.2E-31 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 Gene3D G3DSA:2.60.40.420 157 278 4.2E-15 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS05965 1d248387c1ad8079ef1722d234755c73 463 Pfam PF07732 Multicopper oxidase 57 159 1.8E-34 T 26-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 PAM18_RS06135 56d40540e8400639eb07783e38390492 336 Pfam PF12740 Chlorophyllase enzyme 88 218 9.1E-9 T 26-04-2016 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164|UniPathway: UPA00674 PAM18_RS06135 56d40540e8400639eb07783e38390492 336 Gene3D G3DSA:3.40.50.1820 88 310 3.0E-18 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS06135 56d40540e8400639eb07783e38390492 336 SUPERFAMILY SSF53474 89 306 9.61E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 Pfam PF00106 short chain dehydrogenase 4 188 1.3E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-21 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.2E-21 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-21 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.2E-21 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.2E-21 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PANTHER PTHR24322:SF57 147 179 4.1E-43 T 26-04-2016 PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PANTHER PTHR24322:SF57 8 131 4.1E-43 T 26-04-2016 PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 Gene3D G3DSA:3.40.50.720 3 232 1.2E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PANTHER PTHR24322 147 179 4.1E-43 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PANTHER PTHR24322 8 131 4.1E-43 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 SUPERFAMILY SSF51735 2 232 3.73E-54 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 178 0.0032 T 26-04-2016 PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.2E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS18295 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 PANTHER PTHR30328:SF8 6 192 8.8E-43 T 26-04-2016 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.3E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 SUPERFAMILY SSF46689 5 86 2.99E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 Gene3D G3DSA:1.10.357.10 4 195 2.8E-33 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.0E-18 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19125 39e94bee67fc9f05bd0e530b721dc1d4 197 PANTHER PTHR30328 6 192 8.8E-43 T 26-04-2016 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 Gene3D G3DSA:3.30.200.20 44 123 4.0E-20 T 26-04-2016 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 PANTHER PTHR24362:SF160 46 323 1.9E-56 T 26-04-2016 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 Pfam PF00069 Protein kinase domain 51 280 7.6E-38 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 179 191 - T 26-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 Gene3D G3DSA:1.10.510.10 124 307 2.5E-40 T 26-04-2016 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 57 86 - T 26-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 SUPERFAMILY SSF56112 39 307 1.84E-59 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 SMART SM00220 51 323 1.5E-42 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PAM18_RS17305 a8debb741a45605958b9eceafcba6ac3 329 PANTHER PTHR24362 46 323 1.9E-56 T 26-04-2016 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 PANTHER PTHR23133:SF7 1 176 6.3E-119 T 26-04-2016 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 Gene3D G3DSA:3.40.50.1000 1 176 7.3E-54 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 PANTHER PTHR23133 1 176 6.3E-119 T 26-04-2016 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 SUPERFAMILY SSF56784 2 177 3.39E-46 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 147 1.8E-43 T 26-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 Pfam PF13242 HAD-hyrolase-like 101 170 7.5E-12 T 26-04-2016 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 PIRSF PIRSF004682 1 174 1.8E-53 T 26-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 PAM18_RS00030 68343af7874fd45b80547b0262af8705 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 148 4.8E-35 T 26-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 PANTHER PTHR30126:SF16 6 291 6.1E-172 T 26-04-2016 PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 SUPERFAMILY SSF46785 7 91 6.73E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 SUPERFAMILY SSF53850 93 294 4.5E-35 T 26-04-2016 PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 PANTHER PTHR30126 6 291 6.1E-172 T 26-04-2016 PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 Gene3D G3DSA:1.10.10.10 6 84 3.4E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.6E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 Pfam PF03466 LysR substrate binding domain 92 294 2.4E-37 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS18975 1b518ceed133faba4e1c599ba39991b8 297 Gene3D G3DSA:3.40.190.10 92 216 3.4E-18 T 26-04-2016 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 PANTHER PTHR11695 21 331 6.5E-108 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 SUPERFAMILY SSF51735 120 296 2.66E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 PANTHER PTHR11695:SF528 21 331 6.5E-108 T 26-04-2016 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 Pfam PF16884 N-terminal domain of oxidoreductase 4 108 3.1E-22 T 26-04-2016 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 Gene3D G3DSA:3.90.180.10 2 136 9.2E-37 T 26-04-2016 IPR011032 GroES-like PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 Pfam PF00107 Zinc-binding dehydrogenase 154 287 6.0E-20 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 Gene3D G3DSA:3.40.50.720 137 298 6.4E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 SMART SM00829 14 328 1.3E-5 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS05960 e3a116c9371fccb7080884c556cfa96e 331 SUPERFAMILY SSF50129 2 136 2.36E-26 T 26-04-2016 IPR011032 GroES-like PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Gene3D G3DSA:3.40.50.970 348 524 3.1E-49 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 SUPERFAMILY SSF52518 4 170 2.72E-38 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 SUPERFAMILY SSF52467 185 341 6.78E-62 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 PANTHER PTHR18968 3 527 8.6E-263 T 26-04-2016 PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 325 2.9E-17 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Gene3D G3DSA:3.40.50.970 3 169 9.5E-43 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Gene3D G3DSA:3.40.50.1220 185 337 3.6E-44 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 1.1E-41 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 SUPERFAMILY SSF52518 351 525 7.76E-48 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 PANTHER PTHR18968:SF133 3 527 8.6E-263 T 26-04-2016 PAM18_RS25650 5c8215f80feeeca2593f6f6079ae2cee 528 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 521 6.1E-29 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS22115 1e5b87fe5d081c69d21abdddb8e61700 212 PANTHER PTHR23416:SF61 52 212 5.7E-83 T 26-04-2016 PAM18_RS22115 1e5b87fe5d081c69d21abdddb8e61700 212 SUPERFAMILY SSF51161 17 207 5.68E-46 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS22115 1e5b87fe5d081c69d21abdddb8e61700 212 PANTHER PTHR23416 52 212 5.7E-83 T 26-04-2016 PAM18_RS22115 1e5b87fe5d081c69d21abdddb8e61700 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 145 2.4E-7 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS22115 1e5b87fe5d081c69d21abdddb8e61700 212 Gene3D G3DSA:2.160.10.10 21 208 1.4E-47 T 26-04-2016 PAM18_RS01235 c0d6c5481cb24099de3640e5dd9397ce 148 SUPERFAMILY SSF55729 5 145 9.22E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS01235 c0d6c5481cb24099de3640e5dd9397ce 148 Gene3D G3DSA:3.40.630.30 2 134 8.6E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS01235 c0d6c5481cb24099de3640e5dd9397ce 148 PANTHER PTHR23091 1 135 1.7E-33 T 26-04-2016 PAM18_RS01235 c0d6c5481cb24099de3640e5dd9397ce 148 Pfam PF13508 Acetyltransferase (GNAT) domain 52 126 5.1E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS01235 c0d6c5481cb24099de3640e5dd9397ce 148 PANTHER PTHR23091:SF264 1 135 1.7E-33 T 26-04-2016 PAM18_RS15035 5c6c54536641677d91345604830070a5 409 Pfam PF03573 outer membrane porin, OprD family 26 407 1.5E-143 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS15035 5c6c54536641677d91345604830070a5 409 PANTHER PTHR34596 1 409 9.9E-170 T 26-04-2016 PAM18_RS15035 5c6c54536641677d91345604830070a5 409 Gene3D G3DSA:2.40.160.10 30 409 7.2E-143 T 26-04-2016 IPR023614 Porin domain PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:3.40.50.10490 158 235 1.9E-64 T 26-04-2016 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:3.40.50.10490 23 99 1.9E-64 T 26-04-2016 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 SUPERFAMILY SSF52313 6 231 4.45E-96 T 26-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 Pfam PF00318 Ribosomal protein S2 9 224 6.9E-95 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:1.10.287.610 100 152 2.6E-26 T 26-04-2016 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 9.0E-106 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 26-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-37 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 PANTHER PTHR12534 1 245 4.5E-121 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 26-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS06530 861a105354ee3f8f00326bcc74513910 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.671 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 PAM18_RS12160 f59b35d24b7c6bd272aebefa379b2494 101 Gene3D G3DSA:3.40.1260.10 4 97 1.3E-20 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS12160 f59b35d24b7c6bd272aebefa379b2494 101 PANTHER PTHR37526 4 100 1.5E-33 T 26-04-2016 PAM18_RS12160 f59b35d24b7c6bd272aebefa379b2494 101 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 5 100 5.1E-29 T 26-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PAM18_RS12160 f59b35d24b7c6bd272aebefa379b2494 101 Pfam PF04077 DsrH like protein 10 97 2.2E-23 T 26-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 PAM18_RS12160 f59b35d24b7c6bd272aebefa379b2494 101 SUPERFAMILY SSF75169 4 100 1.77E-24 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 SUPERFAMILY SSF46785 2 109 1.82E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 Gene3D G3DSA:3.40.190.10 88 177 1.0E-20 T 26-04-2016 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 Gene3D G3DSA:1.10.10.10 2 84 2.9E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 PANTHER PTHR30126:SF31 1 283 2.3E-121 T 26-04-2016 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 PANTHER PTHR30126 1 283 2.3E-121 T 26-04-2016 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 Gene3D G3DSA:3.40.190.10 178 256 3.9E-12 T 26-04-2016 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 SUPERFAMILY SSF53850 86 285 1.15E-40 T 26-04-2016 PAM18_RS19015 ff3087f577a7ea4ba9c2f5b64620e7f4 290 Pfam PF03466 LysR substrate binding domain 85 283 3.6E-44 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS18655 be9c2d35030a0006c3e7a8c15fe841c6 366 SUPERFAMILY SSF56266 1 362 1.2E-115 T 26-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS18655 be9c2d35030a0006c3e7a8c15fe841c6 366 PANTHER PTHR36512 1 360 3.8E-205 T 26-04-2016 PAM18_RS18655 be9c2d35030a0006c3e7a8c15fe841c6 366 Pfam PF03576 Peptidase family S58 19 344 2.3E-109 T 26-04-2016 IPR005321 Peptidase S58, DmpA PAM18_RS18655 be9c2d35030a0006c3e7a8c15fe841c6 366 Gene3D G3DSA:3.60.70.12 1 361 8.8E-130 T 26-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS18655 be9c2d35030a0006c3e7a8c15fe841c6 366 PANTHER PTHR36512:SF1 1 360 3.8E-205 T 26-04-2016 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 SUPERFAMILY SSF51215 22 153 6.54E-22 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 Gene3D G3DSA:1.10.10.60 227 274 7.7E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 SUPERFAMILY SSF46689 225 274 4.3E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 Gene3D G3DSA:1.10.10.60 175 226 1.2E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 SMART SM00342 189 272 2.9E-28 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 PANTHER PTHR11019:SF94 1 274 2.3E-162 T 26-04-2016 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 6.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 Pfam PF12833 Helix-turn-helix domain 195 274 5.4E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 Pfam PF02311 AraC-like ligand binding domain 12 150 4.5E-27 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 SUPERFAMILY SSF46689 176 223 4.39E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 PANTHER PTHR11019 1 274 2.3E-162 T 26-04-2016 PAM18_RS17570 381b24995115cfce440107af087c8fb2 274 Gene3D G3DSA:2.60.120.280 21 151 6.4E-16 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS24240 1033571216109fce47f5ef175da4b66c 427 PANTHER PTHR11119 8 427 1.5E-180 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS24240 1033571216109fce47f5ef175da4b66c 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS24240 1033571216109fce47f5ef175da4b66c 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 407 9.2E-111 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS24240 1033571216109fce47f5ef175da4b66c 427 Pfam PF00860 Permease family 12 378 1.1E-92 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS24240 1033571216109fce47f5ef175da4b66c 427 PANTHER PTHR11119:SF49 8 427 1.5E-180 T 26-04-2016 PAM18_RS21420 291c95402062db9542cdb56b9b5a55c1 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 225 3.1E-36 T 26-04-2016 PAM18_RS21420 291c95402062db9542cdb56b9b5a55c1 246 PANTHER PTHR37468 1 243 3.4E-99 T 26-04-2016 PAM18_RS21420 291c95402062db9542cdb56b9b5a55c1 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 3 243 27.598 T 26-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 PAM18_RS17150 77ced11d063478108acfda81e330f45b 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 2.0E-58 T 26-04-2016 IPR012672 Type III secretion system YscX PAM18_RS17150 77ced11d063478108acfda81e330f45b 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 4.5E-54 T 26-04-2016 IPR012672 Type III secretion system YscX PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 Gene3D G3DSA:3.40.190.10 88 182 1.1E-15 T 26-04-2016 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 SUPERFAMILY SSF53850 91 297 6.98E-32 T 26-04-2016 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 PANTHER PTHR30419 1 297 7.2E-159 T 26-04-2016 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 PANTHER PTHR30419:SF7 1 297 7.2E-159 T 26-04-2016 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 Gene3D G3DSA:3.40.190.10 183 259 5.3E-8 T 26-04-2016 PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 Pfam PF03466 LysR substrate binding domain 89 296 6.1E-32 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 Gene3D G3DSA:1.10.10.10 1 86 1.8E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 SUPERFAMILY SSF46785 1 86 1.26E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00965 03c12d72b0d803b556e990742e32c774 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.5E-22 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 211 7.2E-27 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 SUPERFAMILY SSF161098 117 302 7.85E-46 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 PANTHER PTHR30614 3 320 1.2E-148 T 26-04-2016 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 PANTHER PTHR30614:SF0 3 320 1.2E-148 T 26-04-2016 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 Gene3D G3DSA:1.10.3720.10 115 316 3.0E-51 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26540 3a8404d75836b0c609fd317a4130d84d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 316 2.8E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 SUPERFAMILY SSF51556 69 372 8.81E-101 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 PANTHER PTHR11271 24 431 8.5E-158 T 26-04-2016 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 Gene3D G3DSA:2.30.40.10 357 426 4.0E-7 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 PANTHER PTHR11271:SF6 24 431 8.5E-158 T 26-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 Pfam PF01979 Amidohydrolase family 67 426 2.6E-64 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 Gene3D G3DSA:2.30.40.10 27 74 5.2E-4 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 26 425 1.3E-181 T 26-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 Gene3D G3DSA:3.20.20.140 75 356 2.6E-112 T 26-04-2016 PAM18_RS00680 05db69a048c0cc92e16b15b04ee27649 432 SUPERFAMILY SSF51338 23 85 1.68E-7 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 PANTHER PTHR23513:SF9 4 403 1.8E-151 T 26-04-2016 PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 Gene3D G3DSA:1.20.1250.20 10 194 7.0E-17 T 26-04-2016 PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 Gene3D G3DSA:1.20.1250.20 228 395 1.1E-10 T 26-04-2016 PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 Pfam PF05977 Transmembrane secretion effector 9 389 3.9E-35 T 26-04-2016 IPR010290 Transmembrane secretion effector PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 SUPERFAMILY SSF103473 5 399 1.12E-37 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS24105 ced2aa7246fb5de7e686405b9ebe9464 403 PANTHER PTHR23513 4 403 1.8E-151 T 26-04-2016 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 486 3.6E-48 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 PANTHER PTHR32089:SF34 113 490 6.3E-138 T 26-04-2016 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 PANTHER PTHR32089 113 490 6.3E-138 T 26-04-2016 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 SUPERFAMILY SSF58104 181 490 1.31E-77 T 26-04-2016 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 Pfam PF00672 HAMP domain 142 206 5.7E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 SMART SM00283 228 489 6.3E-72 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 SMART SM00304 160 213 6.4E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS10750 cc30bf092283a4d6f9e6712af0eb602a 490 Gene3D G3DSA:1.10.287.950 243 458 2.4E-56 T 26-04-2016 PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 37 278 2.0E-116 T 26-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 Gene3D G3DSA:3.40.50.300 36 275 4.5E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 PANTHER PTHR24220:SF366 39 278 1.2E-146 T 26-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 256 277 1.3E-8 T 26-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 PANTHER PTHR24220 39 278 1.2E-146 T 26-04-2016 PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 SUPERFAMILY SSF52540 37 276 1.57E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25450 b2accdbacae17718e7044e454c835476 278 Pfam PF00005 ABC transporter 53 208 2.5E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 PANTHER PTHR30024:SF3 1 312 1.0E-166 T 26-04-2016 PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 Pfam PF09084 NMT1/THI5 like 66 242 5.9E-17 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 SMART SM00062 28 241 0.0017 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 SUPERFAMILY SSF53850 33 256 8.65E-43 T 26-04-2016 PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 309 1.6E-65 T 26-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 PANTHER PTHR30024 1 312 1.0E-166 T 26-04-2016 PAM18_RS12205 15acffe4cdb39a1b10578c0daacc2b95 314 Gene3D G3DSA:3.40.190.10 106 196 4.8E-23 T 26-04-2016 PAM18_RS17695 39351695d39c61148c6c807ea33a5a32 148 PANTHER PTHR12418:SF18 7 143 5.4E-69 T 26-04-2016 PAM18_RS17695 39351695d39c61148c6c807ea33a5a32 148 PANTHER PTHR12418 7 143 5.4E-69 T 26-04-2016 PAM18_RS17695 39351695d39c61148c6c807ea33a5a32 148 Pfam PF03061 Thioesterase superfamily 62 134 1.4E-12 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS17695 39351695d39c61148c6c807ea33a5a32 148 Gene3D G3DSA:3.10.129.10 22 145 5.2E-20 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17695 39351695d39c61148c6c807ea33a5a32 148 SUPERFAMILY SSF54637 12 145 3.46E-23 T 26-04-2016 IPR029069 HotDog domain PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Gene3D G3DSA:3.30.1360.40 236 334 3.8E-38 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 4.4E-153 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 SUPERFAMILY SSF56719 30 523 1.24E-184 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Gene3D G3DSA:1.10.268.10 364 497 7.1E-48 T 26-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 689 732 3.2E-8 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 586 1.1E-8 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.3E-8 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 837 883 2.2E-12 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 737 781 1.5E-13 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 788 833 2.1E-12 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169:SF48 686 853 0.0 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169:SF48 451 642 0.0 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169:SF48 3 418 0.0 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 SMART SM00434 11 500 0.0 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 887 29.709 T 26-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 SUPERFAMILY SSF101904 683 898 1.7E-99 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 SUPERFAMILY SSF101904 534 639 1.7E-99 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Gene3D G3DSA:3.90.199.10 34 216 3.3E-85 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 638 6.2E-299 T 26-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Gene3D G3DSA:2.120.10.90 533 651 2.3E-130 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 Gene3D G3DSA:2.120.10.90 689 883 2.3E-130 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169 686 853 0.0 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169 451 642 0.0 T 26-04-2016 PAM18_RS09245 2bb1088e656ae3a603b0621c26f7f9bc 923 PANTHER PTHR10169 3 418 0.0 T 26-04-2016 PAM18_RS10865 686ec80c2d335815e4757bd5f2cef76a 77 Pfam PF06568 Domain of unknown function (DUF1127) 26 61 3.5E-12 T 26-04-2016 IPR009506 Protein of unknown function DUF1127 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 SUPERFAMILY SSF64288 63 243 2.04E-47 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 SMART SM00866 96 236 5.1E-33 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 SUPERFAMILY SSF46785 7 79 2.19E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PANTHER PTHR11751 125 148 5.4E-27 T 26-04-2016 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PANTHER PTHR11751 10 78 5.4E-27 T 26-04-2016 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 Gene3D G3DSA:3.40.1410.10 72 243 8.4E-50 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.5E-19 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 SMART SM00345 16 75 5.5E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.68E-10 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.68E-10 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 Pfam PF07702 UTRA domain 97 236 7.8E-37 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 Gene3D G3DSA:1.10.10.10 8 71 8.5E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PANTHER PTHR11751:SF381 125 148 5.4E-27 T 26-04-2016 PAM18_RS14090 1460251549d9744fca245ff5c8082a4f 249 PANTHER PTHR11751:SF381 10 78 5.4E-27 T 26-04-2016 PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 Gene3D G3DSA:1.10.12.10 204 261 3.5E-24 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 Gene3D G3DSA:3.90.226.10 5 201 2.1E-71 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 260 1.2E-72 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 PANTHER PTHR11941:SF54 9 258 1.1E-106 T 26-04-2016 PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 PANTHER PTHR11941 9 258 1.1E-106 T 26-04-2016 PAM18_RS17520 7239f640d3fdda9da8916fd65b0f0774 261 SUPERFAMILY SSF52096 7 260 2.18E-88 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 73 92 0.72 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 108 127 0.017 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF46929 156 200 1.2E-10 T 26-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.8.10 155 200 8.3E-21 T 26-04-2016 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF50249 2 63 5.71E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF47781 66 137 2.54E-22 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Pfam PF01330 RuvA N terminal domain 2 62 1.5E-22 T 26-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 PANTHER PTHR33796 2 201 8.2E-83 T 26-04-2016 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 31.777 T 26-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 199 3.2E-61 T 26-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.9E-18 T 26-04-2016 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:2.40.50.140 2 65 1.2E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Pfam PF07499 RuvA, C-terminal domain 157 200 1.2E-15 T 26-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PAM18_RS20785 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.150.20 68 140 3.2E-30 T 26-04-2016 PAM18_RS23375 dc045a57cfdc0d492ddade18f48f7ee6 125 SUPERFAMILY SSF50685 30 121 1.88E-13 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS23375 dc045a57cfdc0d492ddade18f48f7ee6 125 Pfam PF03330 Lytic transglycolase 33 121 1.6E-28 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS23375 dc045a57cfdc0d492ddade18f48f7ee6 125 PANTHER PTHR34183 29 125 1.4E-51 T 26-04-2016 PAM18_RS23375 dc045a57cfdc0d492ddade18f48f7ee6 125 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 34 124 4.7E-43 T 26-04-2016 IPR012997 Rare lipoprotein A PAM18_RS23375 dc045a57cfdc0d492ddade18f48f7ee6 125 Gene3D G3DSA:2.40.40.10 69 122 2.7E-5 T 26-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 9.7E-5 T 26-04-2016 PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 Pfam PF00106 short chain dehydrogenase 7 201 2.7E-51 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 SUPERFAMILY SSF51735 1 277 1.29E-70 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PANTHER PTHR24322 11 139 7.3E-64 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PANTHER PTHR24322 155 189 7.3E-64 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 Gene3D G3DSA:3.40.50.720 6 251 6.7E-71 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PANTHER PTHR24322:SF365 11 139 7.3E-64 T 26-04-2016 PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PANTHER PTHR24322:SF365 155 189 7.3E-64 T 26-04-2016 PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS17990 22352c6eff9b6e43abc3aefc4e76f9ea 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 772 4.8E-27 T 26-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 1.8E-7 T 26-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 1.8E-7 T 26-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 1.4E-14 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 538 2.7E-15 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 7.3E-14 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 3.1E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 111 306 7.8E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 26-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.30.413.10 633 769 3.3E-34 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PANTHER PTHR22912:SF1 1 415 5.1E-170 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.9E-20 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 8.9E-20 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 8.9E-20 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-20 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 8.9E-20 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.8E-13 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.8E-13 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.8E-13 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 4.8E-13 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF56014 634 800 3.27E-50 T 26-04-2016 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 2 110 2.1E-27 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PIRSF PIRSF037149 1 815 0.0 T 26-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF55124 522 642 4.91E-25 T 26-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 798 1.1E-286 T 26-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF51905 2 306 7.07E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS16745 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PANTHER PTHR22912 1 415 5.1E-170 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.8E-6 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.8E-6 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PANTHER PTHR11632:SF6 1 572 2.4E-256 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 Pfam PF00890 FAD binding domain 9 378 6.5E-37 T 26-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 SUPERFAMILY SSF46977 425 552 3.14E-37 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PANTHER PTHR11632 1 572 2.4E-256 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.7E-10 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.7E-10 T 26-04-2016 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 Gene3D G3DSA:3.50.50.60 3 277 3.6E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 Gene3D G3DSA:3.50.50.60 356 414 3.6E-69 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 541 4.7E-13 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 SUPERFAMILY SSF51905 4 260 3.71E-62 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 SUPERFAMILY SSF51905 356 407 3.71E-62 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 Gene3D G3DSA:1.20.58.100 415 522 4.0E-37 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS14095 68c3a7e00f2f277555ca7b9d7c0bd960 574 PIRSF PIRSF000171 1 561 9.0E-234 T 26-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 PANTHER PTHR11260:SF289 1 209 2.2E-75 T 26-04-2016 PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 82 1.1E-17 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 Gene3D G3DSA:1.20.1050.10 92 210 1.1E-43 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 Gene3D G3DSA:3.40.30.10 1 91 1.3E-31 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 209 3.9E-89 T 26-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 PANTHER PTHR11260 1 209 2.2E-75 T 26-04-2016 PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 SUPERFAMILY SSF52833 1 92 6.87E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 188 1.9E-6 T 26-04-2016 PAM18_RS15575 ee8a9fd1f7dace16e64eb2c31b9aed4a 212 SUPERFAMILY SSF47616 84 210 3.76E-29 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF55186 63 240 2.62E-64 T 26-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.930.10 241 529 1.2E-123 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 3.6E-52 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 3.6E-52 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 3.6E-52 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 3.6E-52 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 3.6E-52 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PANTHER PTHR11451:SF31 1 640 0.0 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 PANTHER PTHR11451 1 640 0.0 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF03129 Anticodon binding domain 540 628 3.6E-19 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 8.3E-224 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 7.6E-46 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 3.2E-14 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF55681 242 525 2.11E-101 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF52954 528 632 3.93E-30 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.980.10 187 223 2.0E-40 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.980.10 65 129 2.0E-40 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.54.20 130 186 1.0E-18 T 26-04-2016 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF81271 3 61 7.52E-15 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 SMART SM00863 169 218 2.1E-20 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.194 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.40.50.800 530 634 1.1E-31 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF02824 TGS domain 4 61 5.2E-10 T 26-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 PAM18_RS11460 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.10.20.30 1 64 9.8E-22 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Gene3D G3DSA:1.10.287.950 467 683 8.3E-58 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 SMART SM00283 452 713 1.7E-81 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Gene3D G3DSA:3.30.450.20 170 240 1.4E-9 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Gene3D G3DSA:3.30.450.20 104 137 1.4E-9 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 SMART SM00304 383 437 1.1E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 PANTHER PTHR32089:SF34 24 714 0.0 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 SUPERFAMILY SSF58104 405 713 2.88E-82 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Pfam PF00672 HAMP domain 365 433 1.3E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 520 712 3.0E-50 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 PANTHER PTHR32089 24 714 0.0 T 26-04-2016 PAM18_RS11920 29abd09e4b1928e3d42794b90da766ed 714 Pfam PF02743 Cache domain 90 333 6.1E-17 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 PANTHER PTHR30367 5 285 1.6E-170 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 PANTHER PTHR30367:SF3 5 285 1.6E-170 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13533 Biotin-lipoyl like 43 88 1.5E-15 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13437 HlyD family secretion protein 153 237 1.9E-12 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 SUPERFAMILY SSF111369 42 222 1.03E-17 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 235 2.7E-31 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.50.100 43 76 1.9E-15 T 26-04-2016 PAM18_RS08540 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.50.100 150 185 1.9E-15 T 26-04-2016 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 Pfam PF01551 Peptidase family M23 286 366 2.9E-11 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 Gene3D G3DSA:2.70.70.10 227 368 1.8E-16 T 26-04-2016 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 SUPERFAMILY SSF51261 226 365 2.09E-17 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PANTHER PTHR21666 61 368 1.1E-37 T 26-04-2016 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 293 311 1.6E-57 T 26-04-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 244 265 1.6E-57 T 26-04-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 266 284 1.6E-57 T 26-04-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 372 395 1.6E-57 T 26-04-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 345 365 1.6E-57 T 26-04-2016 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 PAM18_RS16245 c9811d7779c669f7eefd0f5f564a8b7d 418 PANTHER PTHR21666:SF108 61 368 1.1E-37 T 26-04-2016 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 7 457 3.7E-176 T 26-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 SUPERFAMILY SSF55604 494 567 1.31E-8 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 SUPERFAMILY SSF55604 385 459 3.4E-16 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 Gene3D G3DSA:3.30.1360.60 383 460 2.7E-22 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 398 415 - T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 PANTHER PTHR30009 6 471 1.8E-228 T 26-04-2016 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 Pfam PF02378 Phosphotransferase system, EIIC 14 303 2.7E-72 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 Pfam PF00367 phosphotransferase system, EIIB 389 418 7.6E-9 T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 Pfam PF00367 phosphotransferase system, EIIB 496 527 1.1E-4 T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 PANTHER PTHR30009:SF4 6 471 1.8E-228 T 26-04-2016 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 444 1.2E-14 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PAM18_RS06000 1118fa974bb9825e875f84ff9ab2aa13 570 Gene3D G3DSA:3.30.1360.60 494 568 1.9E-12 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 Pfam PF01553 Acyltransferase 61 181 7.3E-21 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 PANTHER PTHR10434:SF8 1 191 9.0E-91 T 26-04-2016 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 PANTHER PTHR10434:SF8 208 245 9.0E-91 T 26-04-2016 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 SUPERFAMILY SSF69593 46 227 1.96E-25 T 26-04-2016 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 Gene3D G3DSA:3.40.1130.10 71 182 2.2E-8 T 26-04-2016 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 SMART SM00563 72 183 2.1E-28 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 PANTHER PTHR10434 1 191 9.0E-91 T 26-04-2016 PAM18_RS22695 91a5b80612eedb13db4348d9f4deef0d 258 PANTHER PTHR10434 208 245 9.0E-91 T 26-04-2016 PAM18_RS02040 a3694ff9795a41c914356700453ce477 170 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 1 168 28.031 T 26-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PAM18_RS02040 a3694ff9795a41c914356700453ce477 170 Gene3D G3DSA:3.40.50.2020 8 152 6.2E-37 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS02040 a3694ff9795a41c914356700453ce477 170 PANTHER PTHR11608 1 170 3.2E-82 T 26-04-2016 PAM18_RS02040 a3694ff9795a41c914356700453ce477 170 SUPERFAMILY SSF53271 8 155 7.53E-35 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS02040 a3694ff9795a41c914356700453ce477 170 Pfam PF00156 Phosphoribosyl transferase domain 20 136 1.1E-16 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 Pfam PF01926 50S ribosome-binding GTPase 8 152 1.0E-15 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 PANTHER PTHR11649 7 79 8.6E-15 T 26-04-2016 PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 PANTHER PTHR11649 116 152 8.6E-15 T 26-04-2016 PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 Pfam PF11981 Domain of unknown function (DUF3482) 165 450 1.1E-110 T 26-04-2016 IPR021871 Protein of unknown function DUF3482 PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 Gene3D G3DSA:3.40.50.300 109 169 2.2E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 Gene3D G3DSA:3.40.50.300 4 76 2.2E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01735 5140a24f02f68b5ab0df450e5c38799d 459 SUPERFAMILY SSF52540 4 168 7.46E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 PANTHER PTHR11941 3 253 7.2E-135 T 26-04-2016 PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 246 9.0E-41 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 PANTHER PTHR11941:SF21 3 253 7.2E-135 T 26-04-2016 PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 SUPERFAMILY SSF52096 3 252 1.53E-68 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS07910 2261e3df34201f6109a9f5968da033bc 256 Gene3D G3DSA:3.90.226.10 3 246 7.6E-69 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS13845 ce0757eba2c4f4279724be3986ad28cc 264 Gene3D G3DSA:3.40.190.10 26 153 3.7E-44 T 26-04-2016 PAM18_RS13845 ce0757eba2c4f4279724be3986ad28cc 264 PANTHER PTHR30429:SF1 7 264 8.7E-123 T 26-04-2016 PAM18_RS13845 ce0757eba2c4f4279724be3986ad28cc 264 PANTHER PTHR30429 7 264 8.7E-123 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS13845 ce0757eba2c4f4279724be3986ad28cc 264 Pfam PF03180 NLPA lipoprotein 26 263 1.4E-74 T 26-04-2016 IPR004872 Lipoprotein NlpA family PAM18_RS13845 ce0757eba2c4f4279724be3986ad28cc 264 SUPERFAMILY SSF53850 26 263 1.9E-64 T 26-04-2016 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 1.7E-210 T 26-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 PANTHER PTHR11699:SF188 3 483 0.0 T 26-04-2016 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 Pfam PF00171 Aldehyde dehydrogenase family 15 477 5.3E-140 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.605.10 4 259 1.2E-90 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.309.10 260 442 1.1E-63 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 PANTHER PTHR11699 3 483 0.0 T 26-04-2016 PAM18_RS00660 279fd18557dcb2de7c978a27209ef2bf 497 SUPERFAMILY SSF53720 3 483 3.67E-149 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 SUPERFAMILY SSF56112 5 306 1.09E-67 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 Gene3D G3DSA:3.30.200.20 1 102 1.7E-35 T 26-04-2016 PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 Gene3D G3DSA:3.90.1200.10 106 308 7.9E-59 T 26-04-2016 PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 PANTHER PTHR21064 12 292 2.0E-56 T 26-04-2016 PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 303 1.0E-85 T 26-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 Pfam PF01636 Phosphotransferase enzyme family 28 254 8.8E-37 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase PAM18_RS28705 12f2fdd7821177358715af932b83da0b 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 146.652 T 26-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 SUPERFAMILY SSF52540 12 203 1.53E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 PANTHER PTHR30069 10 203 3.2E-63 T 26-04-2016 PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 203 5.8E-59 T 26-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 26 1.6E-9 T 26-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 Gene3D G3DSA:3.40.50.300 7 203 6.6E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 203 1.3E-68 T 26-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS19215 5ceec8146b243e5dbbbd6b02170d9dd4 203 PIRSF PIRSF015617 6 203 3.5E-71 T 26-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 SMART SM00342 173 255 6.5E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 SUPERFAMILY SSF51182 16 182 3.11E-13 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 Pfam PF02311 AraC-like ligand binding domain 19 143 2.6E-18 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 PANTHER PTHR11019 2 259 1.4E-118 T 26-04-2016 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:1.10.10.60 211 253 1.0E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 SUPERFAMILY SSF46689 210 255 1.51E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 Pfam PF12833 Helix-turn-helix domain 181 256 8.4E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:2.60.120.10 28 85 1.7E-8 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:1.10.10.60 152 210 2.1E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS20045 7535d6219181a938e6320b36af334ae2 259 PANTHER PTHR11019:SF99 2 259 1.4E-118 T 26-04-2016 PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 Gene3D G3DSA:2.60.120.10 7 231 6.3E-71 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 PIRSF PIRSF006232 1 231 2.6E-56 T 26-04-2016 IPR012093 Pirin PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 Pfam PF02678 Pirin 12 118 2.4E-37 T 26-04-2016 IPR003829 Pirin, N-terminal domain PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 PANTHER PTHR13903:SF7 1 231 3.1E-118 T 26-04-2016 PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 SUPERFAMILY SSF51182 1 231 1.1E-74 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19540 8d2eebd93e12cbdb8cb807ce009b242a 232 PANTHER PTHR13903 1 231 3.1E-118 T 26-04-2016 IPR012093 Pirin PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 202 372 7.9E-13 T 26-04-2016 PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 13 181 2.0E-15 T 26-04-2016 PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 SUPERFAMILY SSF103473 11 381 3.4E-39 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 Pfam PF07690 Major Facilitator Superfamily 14 318 4.6E-18 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 PANTHER PTHR23514:SF13 1 381 1.7E-147 T 26-04-2016 PAM18_RS07485 670a8f342c47841e89fce46e222d406d 383 PANTHER PTHR23514 1 381 1.7E-147 T 26-04-2016 PAM18_RS09720 d99edd25046ccee780237a81fc736dbb 164 Pfam PF14316 Domain of unknown function (DUF4381) 6 162 5.4E-42 T 26-04-2016 IPR025489 Protein of unknown function (DUF4381 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 SUPERFAMILY SSF53850 11 259 1.34E-52 T 26-04-2016 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 4.4E-40 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 18 149 7.7E-34 T 26-04-2016 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 150 200 4.8E-6 T 26-04-2016 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 PANTHER PTHR18966 28 262 3.8E-136 T 26-04-2016 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 PANTHER PTHR18966:SF243 28 262 3.8E-136 T 26-04-2016 PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 SMART SM00062 38 261 2.0E-56 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS07665 55e303d8a190492b44af291bf6405af2 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS27315 9499d903aa76bf393c017881a7c69f12 184 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 172 3.0E-30 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS27315 9499d903aa76bf393c017881a7c69f12 184 PANTHER PTHR37528 1 184 1.7E-41 T 26-04-2016 PAM18_RS27315 9499d903aa76bf393c017881a7c69f12 184 SUPERFAMILY SSF101327 7 171 2.09E-40 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS27315 9499d903aa76bf393c017881a7c69f12 184 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 4 182 31.486 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS28510 ca422c2b78e3ac6f80c4060e395a9f0d 433 Gene3D G3DSA:3.40.50.2000 225 396 2.3E-7 T 26-04-2016 PAM18_RS28510 ca422c2b78e3ac6f80c4060e395a9f0d 433 SUPERFAMILY SSF53756 82 161 3.09E-19 T 26-04-2016 PAM18_RS28510 ca422c2b78e3ac6f80c4060e395a9f0d 433 SUPERFAMILY SSF53756 197 420 3.09E-19 T 26-04-2016 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 272 1.8E-55 T 26-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PANTHER PTHR11482 3 386 3.4E-132 T 26-04-2016 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:3.20.20.10 35 255 5.5E-65 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 384 5.4E-17 T 26-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF50621 245 386 1.51E-30 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 26-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 26-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PANTHER PTHR11482:SF6 3 386 3.4E-132 T 26-04-2016 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF51419 25 273 4.86E-66 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 3.8E-18 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 3.8E-18 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 3.8E-18 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 3.8E-18 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 26 50 1.1E-18 T 26-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 1.1E-18 T 26-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 1.1E-18 T 26-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 1.1E-18 T 26-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.1E-18 T 26-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 PAM18_RS23545 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:2.40.37.10 256 386 7.7E-28 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PANTHER PTHR10804 1 257 6.7E-179 T 26-04-2016 PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PANTHER PTHR10804:SF75 1 257 6.7E-179 T 26-04-2016 PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-23 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 2.9E-23 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 2.9E-23 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 2.9E-23 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Pfam PF00557 Metallopeptidase family M24 12 241 1.9E-59 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 SUPERFAMILY SSF55920 4 254 1.44E-95 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Gene3D G3DSA:3.90.230.10 4 255 2.3E-105 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.7E-105 T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS06525 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 44.358 T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Pfam PF09129 Cholesterol oxidase, substrate-binding 277 597 7.3E-159 T 26-04-2016 IPR015213 Cholesterol oxidase, substrate-binding PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Gene3D G3DSA:3.30.465.10 151 272 9.9E-35 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Gene3D G3DSA:1.10.45.10 549 597 6.6E-24 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Pfam PF01565 FAD binding domain 92 211 1.9E-12 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Gene3D G3DSA:3.40.462.10 275 547 1.2E-137 T 26-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 SUPERFAMILY SSF56176 62 271 4.63E-35 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 SUPERFAMILY SSF55103 277 597 1.18E-159 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 Gene3D G3DSA:3.30.43.10 71 144 1.5E-27 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 PANTHER PTHR11748 66 236 1.0E-17 T 26-04-2016 PAM18_RS04070 2cf673b1c246fb98f42131dafe5ad94e 597 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 54 4.1E-5 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:3.90.550.10 1 244 7.5E-70 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 43.326 T 26-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.5E-203 T 26-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 SUPERFAMILY SSF51161 252 439 2.45E-49 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:2.160.10.10 321 449 1.2E-34 T 26-04-2016 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 PANTHER PTHR22572 4 446 1.0E-226 T 26-04-2016 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:2.160.10.10 245 320 2.3E-16 T 26-04-2016 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 SUPERFAMILY SSF53448 1 249 1.07E-63 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 PANTHER PTHR22572:SF115 4 446 1.0E-226 T 26-04-2016 PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF12804 MobA-like NTP transferase domain 6 121 1.8E-24 T 26-04-2016 IPR025877 MobA-like NTP transferase PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.5E-5 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS29030 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 296 1.2E-7 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 Gene3D G3DSA:3.40.50.720 1 246 1.2E-86 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.6E-46 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PANTHER PTHR24322:SF635 10 138 9.9E-73 T 26-04-2016 PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PANTHER PTHR24322:SF635 154 186 9.9E-73 T 26-04-2016 PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.6E-63 T 26-04-2016 PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PANTHER PTHR24322 10 138 9.9E-73 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PANTHER PTHR24322 154 186 9.9E-73 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 SUPERFAMILY SSF51735 4 246 6.59E-83 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.3E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.3E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.3E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.3E-5 T 26-04-2016 PAM18_RS10240 f8e6c68d25d7da7825ad10287e89cc1d 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.1E-100 T 26-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 Gene3D G3DSA:3.30.160.20 213 290 1.1E-36 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 SUPERFAMILY SSF75620 12 355 6.28E-135 T 26-04-2016 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 Gene3D G3DSA:1.20.58.410 8 94 3.7E-19 T 26-04-2016 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 PANTHER PTHR11075 1 358 1.4E-177 T 26-04-2016 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.6E-167 T 26-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 SMART SM00937 65 180 1.4E-67 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.015 T 26-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 Pfam PF03462 PCRF domain 13 205 6.0E-73 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 PANTHER PTHR11075:SF9 1 358 1.4E-177 T 26-04-2016 PAM18_RS24330 9dd36d82ec73896d8306d91384ba7485 360 Pfam PF00472 RF-1 domain 215 323 3.2E-43 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS18725 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 SUPERFAMILY SSF160544 10 86 2.88E-19 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS18725 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 PANTHER PTHR30531 1 96 7.9E-37 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18725 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 81 2.2E-16 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS18725 bc699f3fd82aa3a5f55ae0b9ea4e3187 111 Gene3D G3DSA:3.40.1690.10 11 86 9.1E-22 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.8E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 Gene3D G3DSA:1.10.10.10 8 93 2.5E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.5E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 SUPERFAMILY SSF46785 8 93 1.31E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 PANTHER PTHR30126 8 294 1.6E-176 T 26-04-2016 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 SUPERFAMILY SSF53850 98 295 3.15E-31 T 26-04-2016 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 PANTHER PTHR30126:SF16 8 294 1.6E-176 T 26-04-2016 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 Gene3D G3DSA:3.40.190.10 98 203 1.7E-16 T 26-04-2016 PAM18_RS19855 148258c1f5c870125fac64ae87a91714 300 Pfam PF03466 LysR substrate binding domain 96 294 4.9E-34 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS17355 ea248e8708aeb6c83254da065f581c9f 335 PANTHER PTHR35564 2 325 2.3E-164 T 26-04-2016 PAM18_RS17355 ea248e8708aeb6c83254da065f581c9f 335 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 20 320 1.1E-88 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS17355 ea248e8708aeb6c83254da065f581c9f 335 PANTHER PTHR35564:SF3 2 325 2.3E-164 T 26-04-2016 PAM18_RS17355 ea248e8708aeb6c83254da065f581c9f 335 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 9.3E-98 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 251 1.3E-94 T 26-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 PANTHER PTHR18966 27 251 1.3E-68 T 26-04-2016 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 SMART SM00062 25 254 2.1E-81 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 SUPERFAMILY SSF53850 1 255 3.03E-70 T 26-04-2016 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 Gene3D G3DSA:3.40.190.10 23 111 4.4E-47 T 26-04-2016 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 Gene3D G3DSA:3.40.190.10 213 255 4.4E-47 T 26-04-2016 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 252 3.2E-66 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 PANTHER PTHR18966:SF152 27 251 1.3E-68 T 26-04-2016 PAM18_RS21205 83a71b07e1fbdcbed0f7e382b1b06eee 259 Gene3D G3DSA:3.40.190.10 113 211 1.2E-26 T 26-04-2016 PAM18_RS01515 6b6dd5587c9b1db5a1b9025358cb30fa 303 PANTHER PTHR30193 1 303 3.2E-142 T 26-04-2016 PAM18_RS01515 6b6dd5587c9b1db5a1b9025358cb30fa 303 Gene3D G3DSA:1.10.3720.10 13 293 1.6E-54 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01515 6b6dd5587c9b1db5a1b9025358cb30fa 303 PANTHER PTHR30193:SF5 1 303 3.2E-142 T 26-04-2016 PAM18_RS01515 6b6dd5587c9b1db5a1b9025358cb30fa 303 SUPERFAMILY SSF161098 15 293 6.41E-56 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01515 6b6dd5587c9b1db5a1b9025358cb30fa 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 289 7.8E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 Gene3D G3DSA:3.30.565.10 278 424 3.7E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 PANTHER PTHR24423 149 424 5.7E-81 T 26-04-2016 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00387 318 428 2.5E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 2.0E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF55874 263 424 2.75E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 PANTHER PTHR24423:SF564 149 424 5.7E-81 T 26-04-2016 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF158472 158 206 3.4E-6 T 26-04-2016 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF00672 HAMP domain 138 203 1.3E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SUPERFAMILY SSF47384 191 274 4.51E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 1.6E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00304 155 207 6.9E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 Gene3D G3DSA:1.10.287.130 198 269 2.1E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 SMART SM00388 208 273 2.6E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS16630 210966b9eec25f59cb14f8f75f7b9373 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.1E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 620 989 2.6E-120 T 26-04-2016 IPR010080 Thioester reductase-like domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:3.30.300.30 390 516 2.6E-33 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Pfam PF00501 AMP-binding enzyme 10 395 3.3E-80 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:3.40.50.720 620 944 7.0E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 482 9.5E-12 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 419 8.6E-111 T 26-04-2016 IPR010071 Amino acid adenylation domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Pfam PF07993 Male sterility protein 623 866 9.0E-50 T 26-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:3.40.50.980 169 309 3.7E-31 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 PANTHER PTHR24095:SF137 5 991 9.5E-235 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 PANTHER PTHR24095 5 991 9.5E-235 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 SUPERFAMILY SSF47336 510 576 6.02E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 SUPERFAMILY SSF51735 614 915 1.0E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 SUPERFAMILY SSF51735 944 963 1.0E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 SUPERFAMILY SSF56801 6 522 4.19E-137 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 534 549 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:1.10.1200.10 517 581 4.2E-19 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:3.40.50.980 5 168 3.7E-40 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Gene3D G3DSA:2.30.38.10 310 385 1.9E-20 T 26-04-2016 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 SMART SM00823 Phosphopantetheine attachment site 510 579 0.0015 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS04390 72b0787048433e74fb64b8a1ef6a813b 991 Pfam PF00550 Phosphopantetheine attachment site 516 573 1.3E-9 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 PANTHER PTHR11751 44 373 4.2E-81 T 26-04-2016 PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 Gene3D G3DSA:3.40.640.10 57 241 1.7E-34 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 PANTHER PTHR11751:SF347 44 373 4.2E-81 T 26-04-2016 PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 Gene3D G3DSA:3.90.1150.10 242 363 1.4E-27 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 SUPERFAMILY SSF53383 42 363 1.55E-62 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS12925 29c99ed3a19b0c41929054b0fb964db6 374 Pfam PF00155 Aminotransferase class I and II 60 358 3.9E-38 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 TIGRFAM TIGR00749 glk: glucokinase 14 320 7.3E-76 T 26-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 PANTHER PTHR30514:SF0 7 330 5.6E-100 T 26-04-2016 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 SUPERFAMILY SSF53067 14 327 1.65E-52 T 26-04-2016 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 Hamap MF_00524 Glucokinase [glk]. 10 326 37.148 T 26-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 Pfam PF02685 Glucokinase 14 325 8.1E-106 T 26-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 Gene3D G3DSA:3.40.367.20 109 309 8.8E-62 T 26-04-2016 PAM18_RS09120 4c0eeba137e6ccc8ca005953ffc0f2af 331 PANTHER PTHR30514 7 330 5.6E-100 T 26-04-2016 PAM18_RS25930 9a0f21a7acd6868912f2e8beb9047c09 503 Gene3D G3DSA:1.10.3150.10 15 237 3.8E-12 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS25930 9a0f21a7acd6868912f2e8beb9047c09 503 SUPERFAMILY SSF109604 235 246 1.44E-18 T 26-04-2016 PAM18_RS25930 9a0f21a7acd6868912f2e8beb9047c09 503 SUPERFAMILY SSF109604 13 206 1.44E-18 T 26-04-2016 PAM18_RS25930 9a0f21a7acd6868912f2e8beb9047c09 503 Pfam PF08668 HDOD domain 17 200 3.6E-13 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS25310 571e0428d021f2c6731edbb05e75cb0f 205 PANTHER PTHR20855:SF3 3 205 2.6E-61 T 26-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 PAM18_RS25310 571e0428d021f2c6731edbb05e75cb0f 205 Pfam PF03006 Haemolysin-III related 2 197 4.9E-45 T 26-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PAM18_RS25310 571e0428d021f2c6731edbb05e75cb0f 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 1.7E-63 T 26-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 PAM18_RS25310 571e0428d021f2c6731edbb05e75cb0f 205 PANTHER PTHR20855 3 205 2.6E-61 T 26-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 Pfam PF01207 Dihydrouridine synthase (Dus) 18 311 4.2E-83 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 Gene3D G3DSA:3.20.20.70 12 258 4.0E-75 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 PANTHER PTHR11082:SF29 12 329 2.5E-150 T 26-04-2016 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 SUPERFAMILY SSF51395 15 325 9.89E-73 T 26-04-2016 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 14 329 3.9E-139 T 26-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 PANTHER PTHR11082 12 329 2.5E-150 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 PIRSF PIRSF006621 5 330 5.6E-75 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 10 331 50.859 T 26-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 PAM18_RS11125 a620127baebaa8a0b43be2d8246fdfb2 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 26-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 263 339 1.5E-21 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PANTHER PTHR33446:SF1 40 340 6.6E-132 T 26-04-2016 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PANTHER PTHR33446 40 340 6.6E-132 T 26-04-2016 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PRINTS PR01374 Gram-negative bacterial tonB protein signature 170 180 1.9E-30 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PRINTS PR01374 Gram-negative bacterial tonB protein signature 278 296 1.9E-30 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PRINTS PR01374 Gram-negative bacterial tonB protein signature 297 314 1.9E-30 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 PRINTS PR01374 Gram-negative bacterial tonB protein signature 257 278 1.9E-30 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 Gene3D G3DSA:3.30.1150.10 227 326 1.1E-11 T 26-04-2016 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 SUPERFAMILY SSF74653 256 337 1.31E-24 T 26-04-2016 PAM18_RS28890 3f4ebed0ff27bd8b4ffa051291cb3cef 343 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 262 338 4.1E-21 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 Gene3D G3DSA:3.10.105.10 290 502 2.1E-63 T 26-04-2016 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 PIRSF PIRSF002741 13 529 7.4E-105 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 PANTHER PTHR30290 1 531 9.6E-205 T 26-04-2016 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 PANTHER PTHR30290:SF14 1 531 9.6E-205 T 26-04-2016 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 449 2.5E-97 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 Gene3D G3DSA:3.90.76.10 37 216 2.6E-46 T 26-04-2016 PAM18_RS23435 dacf7c5776946dede9549d5eee8ff240 532 SUPERFAMILY SSF53850 27 531 1.45E-146 T 26-04-2016 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PANTHER PTHR11236:SF9 1 489 1.6E-243 T 26-04-2016 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 Pfam PF00425 chorismate binding enzyme 223 476 5.7E-97 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PANTHER PTHR11236 1 489 1.6E-243 T 26-04-2016 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 Gene3D G3DSA:3.60.120.10 13 490 9.2E-176 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 8.7E-169 T 26-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.15E-25 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.15E-25 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.15E-25 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.15E-25 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 168 1.0E-32 T 26-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS03085 417b2f634988b3cf37580962c9ae7be7 492 SUPERFAMILY SSF56322 14 485 1.15E-158 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 267 1.0E-27 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 Gene3D G3DSA:1.10.3720.10 85 268 3.4E-35 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 PANTHER PTHR30177 6 279 2.1E-119 T 26-04-2016 PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 SUPERFAMILY SSF161098 87 271 5.89E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 5 271 3.2E-126 T 26-04-2016 IPR017784 ABC transporter, choline, permease protein PAM18_RS28105 86aad7dca18f127a73b10c502bbf68fd 279 PANTHER PTHR30177:SF2 6 279 2.1E-119 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 Gene3D G3DSA:3.30.20.10 109 146 5.6E-10 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 Gene3D G3DSA:1.10.530.10 35 54 1.4E-5 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 Gene3D G3DSA:1.10.530.10 147 188 1.4E-5 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 PANTHER PTHR34408 21 60 1.8E-35 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 PANTHER PTHR34408 86 203 1.8E-35 T 26-04-2016 PAM18_RS12600 514e6efefe3516e169bd097f73c55323 205 SUPERFAMILY SSF53955 8 202 1.91E-42 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Pfam PF09334 tRNA synthetases class I (M) 7 395 9.3E-154 T 26-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 SUPERFAMILY SSF50249 570 676 2.03E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 545 39.326 T 26-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 2.2E-24 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PANTHER PTHR11946 1 632 4.1E-240 T 26-04-2016 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Gene3D G3DSA:2.20.28.20 144 175 4.5E-18 T 26-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Pfam PF01588 Putative tRNA binding domain 581 674 4.3E-20 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 SUPERFAMILY SSF52374 4 140 2.32E-98 T 26-04-2016 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 SUPERFAMILY SSF52374 175 386 2.32E-98 T 26-04-2016 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 535 5.6E-174 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 1.9E-40 T 26-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 SUPERFAMILY SSF57770 141 175 5.36E-12 T 26-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Gene3D G3DSA:3.40.50.620 5 143 1.3E-83 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Gene3D G3DSA:3.40.50.620 182 378 1.3E-83 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Gene3D G3DSA:2.40.50.140 567 677 3.7E-36 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 PANTHER PTHR11946:SF86 1 632 4.1E-240 T 26-04-2016 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 Gene3D G3DSA:1.10.730.10 379 534 2.3E-41 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS07630 b8c159df28bebe258b8a96fb04a6871d 677 SUPERFAMILY SSF47323 389 547 8.97E-43 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 PANTHER PTHR10696 42 337 9.4E-166 T 26-04-2016 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 SUPERFAMILY SSF51197 23 336 1.51E-81 T 26-04-2016 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 PANTHER PTHR10696:SF27 42 337 9.4E-166 T 26-04-2016 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 334 1.6E-49 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 Gene3D G3DSA:3.60.130.10 218 338 3.9E-69 T 26-04-2016 PAM18_RS14065 119f4c25277e3b5fbc9b0366d9e9cecd 362 Gene3D G3DSA:3.60.130.10 35 186 3.9E-69 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 560 583 1.1E-6 T 26-04-2016 IPR010609 Gp5, C-terminal PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 46 486 1.6E-128 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 20 504 8.2E-179 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 SUPERFAMILY SSF69279 188 347 9.86E-36 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 SUPERFAMILY SSF69279 20 183 3.74E-48 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 Gene3D G3DSA:2.40.50.230 352 434 6.0E-40 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 Gene3D G3DSA:3.55.50.10 96 188 4.4E-38 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 SUPERFAMILY SSF69349 424 640 2.51E-45 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 PANTHER PTHR32305:SF7 19 652 1.5E-234 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 SUPERFAMILY SSF69255 347 434 2.22E-33 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 Pfam PF05954 Phage late control gene D protein (GPD) 30 322 1.4E-84 T 26-04-2016 PAM18_RS13720 74b78539e5861119991b0e4d9ba7dec6 668 PANTHER PTHR32305 19 652 1.5E-234 T 26-04-2016 PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 SUPERFAMILY SSF69118 5 111 1.13E-29 T 26-04-2016 IPR029032 AhpD-like PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 PANTHER PTHR33930:SF2 1 112 3.2E-38 T 26-04-2016 PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 Gene3D G3DSA:1.20.1290.10 1 111 1.5E-34 T 26-04-2016 IPR029032 AhpD-like PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 90 1.5E-19 T 26-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 PANTHER PTHR33930 1 112 3.2E-38 T 26-04-2016 PAM18_RS02855 f43ca2954e415b463fda48c735d09799 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.4E-19 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PANTHER PTHR22893:SF25 1 433 2.1E-199 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 Gene3D G3DSA:3.20.20.70 2 374 1.1E-107 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 1.9E-5 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 412 1.9E-5 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 1.1E-62 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 609 623 3.9E-7 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 667 3.9E-7 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 414 3.9E-7 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 643 1.7E-10 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 SUPERFAMILY SSF51905 380 683 5.83E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 Gene3D G3DSA:3.50.50.60 478 633 1.2E-30 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 Gene3D G3DSA:3.50.50.60 375 464 1.7E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 PANTHER PTHR22893 1 433 2.1E-199 T 26-04-2016 PAM18_RS28210 5dadc8624938596b6aab60cf4f740a37 686 SUPERFAMILY SSF51395 4 370 5.64E-98 T 26-04-2016 PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 Pfam PF03772 Competence protein 201 463 1.1E-53 T 26-04-2016 IPR004477 ComEC/Rec2-related protein PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 222 400 3.4E-21 T 26-04-2016 IPR004477 ComEC/Rec2-related protein PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 PANTHER PTHR30619 1 737 1.2E-212 T 26-04-2016 PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 Pfam PF00753 Metallo-beta-lactamase superfamily 501 668 3.4E-18 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 122 716 3.5E-87 T 26-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 PANTHER PTHR30619:SF2 1 737 1.2E-212 T 26-04-2016 PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 Gene3D G3DSA:3.60.15.10 494 708 7.8E-28 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 Pfam PF13567 Domain of unknown function (DUF4131) 9 168 5.8E-23 T 26-04-2016 IPR025405 Domain of unknown function DUF4131 PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 SUPERFAMILY SSF56281 496 721 4.19E-41 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10155 001effd239778acceed91eb856b9fbb4 741 SMART SM00849 504 687 9.3E-10 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 SUPERFAMILY SSF117143 78 207 7.59E-16 T 26-04-2016 PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF00460 Flagella basal body rod protein 5 35 5.0E-6 T 26-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.9E-31 T 26-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 PANTHER PTHR30435:SF18 1 249 2.1E-112 T 26-04-2016 PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 PANTHER PTHR30435 1 249 2.1E-112 T 26-04-2016 PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 226 2.5E-53 T 26-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 PAM18_RS20240 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 239 4.2E-18 T 26-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 Gene3D G3DSA:3.30.470.20 140 359 2.2E-71 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 SUPERFAMILY SSF52440 2 94 2.45E-22 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 Pfam PF02222 ATP-grasp domain 106 272 9.6E-58 T 26-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 PANTHER PTHR11609 1 354 4.0E-158 T 26-04-2016 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 348 5.0E-109 T 26-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 Gene3D G3DSA:3.40.50.20 2 97 2.7E-27 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.405 T 26-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 SUPERFAMILY SSF51246 297 356 2.35E-13 T 26-04-2016 IPR011054 Rudiment single hybrid motif PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 Gene3D G3DSA:3.30.1490.20 98 139 1.3E-6 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 PANTHER PTHR11609:SF8 1 354 4.0E-158 T 26-04-2016 PAM18_RS28345 ca3fb61235cd8e3a79260a410519767a 360 SUPERFAMILY SSF56059 97 292 2.65E-56 T 26-04-2016 PAM18_RS15305 727d19f5f85c914d0d3a6bc7fff2179e 336 PANTHER PTHR30325 1 336 1.1E-202 T 26-04-2016 PAM18_RS15305 727d19f5f85c914d0d3a6bc7fff2179e 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 335 2.7E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS15305 727d19f5f85c914d0d3a6bc7fff2179e 336 SUPERFAMILY SSF161098 133 319 1.44E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS15305 727d19f5f85c914d0d3a6bc7fff2179e 336 Gene3D G3DSA:1.10.3720.10 129 334 4.6E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 Gene3D G3DSA:2.40.170.20 191 720 4.4E-135 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 PANTHER PTHR32552 1 720 2.4E-216 T 26-04-2016 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 174 1.2E-11 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 Pfam PF00593 TonB dependent receptor 478 717 3.6E-32 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 Gene3D G3DSA:2.170.130.10 59 182 9.0E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 720 1.8E-176 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 SUPERFAMILY SSF56935 43 720 6.64E-130 T 26-04-2016 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 PANTHER PTHR32552:SF10 1 720 2.4E-216 T 26-04-2016 PAM18_RS03665 c490aa6b48bc8e269e35482fd8ff52ae 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 PANTHER PTHR26402 3 212 1.0E-68 T 26-04-2016 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 Gene3D G3DSA:3.40.50.2300 2 155 8.9E-29 T 26-04-2016 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 SUPERFAMILY SSF46894 143 212 1.05E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 SMART SM00448 3 119 2.0E-16 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 SMART SM00421 150 207 2.4E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.8E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.8E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.8E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 SUPERFAMILY SSF52172 1 127 2.56E-25 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 2.0E-13 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 PANTHER PTHR26402:SF458 3 212 1.0E-68 T 26-04-2016 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 Pfam PF00072 Response regulator receiver domain 5 120 4.3E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 Gene3D G3DSA:1.10.10.10 156 212 2.9E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS06240 c0130f6230485be7250744c3770e5ed4 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22735 5a26a56179be21107ea821788695ead6 75 Pfam PF04023 FeoA domain 2 65 2.6E-11 T 26-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PAM18_RS22735 5a26a56179be21107ea821788695ead6 75 PANTHER PTHR33238 1 75 2.2E-23 T 26-04-2016 PAM18_RS22735 5a26a56179be21107ea821788695ead6 75 SUPERFAMILY SSF50037 3 71 2.98E-17 T 26-04-2016 IPR008988 Transcriptional repressor, C-terminal PAM18_RS22735 5a26a56179be21107ea821788695ead6 75 SMART SM00899 1 73 5.1E-12 T 26-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 910 0.0 T 26-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670 8 393 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670 435 669 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670 685 730 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670 769 910 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Gene3D G3DSA:3.30.499.10 438 594 4.5E-63 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Gene3D G3DSA:3.30.499.10 369 393 4.5E-63 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 SUPERFAMILY SSF53732 5 645 4.05E-227 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 ProSitePatterns PS01244 Aconitase family signature 2. 512 525 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 372 386 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 450 461 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 170 178 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 146 159 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 293 306 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 217 232 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 279 292 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 512 525 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PRINTS PR00415 Aconitase family signature 203 216 7.7E-42 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Pfam PF00330 Aconitase family (aconitate hydratase) 75 581 2.4E-184 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670:SF1 8 393 0.0 T 26-04-2016 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670:SF1 435 669 0.0 T 26-04-2016 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670:SF1 685 730 0.0 T 26-04-2016 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 PANTHER PTHR11670:SF1 769 910 0.0 T 26-04-2016 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Gene3D G3DSA:3.40.1060.10 250 367 1.4E-35 T 26-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 SUPERFAMILY SSF52016 649 909 1.1E-90 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Gene3D G3DSA:3.20.19.10 655 909 2.4E-83 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Gene3D G3DSA:3.30.499.10 26 249 7.1E-79 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 Pfam PF00694 Aconitase C-terminal domain 710 837 9.8E-50 T 26-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS17860 964d627e054e29855550e20ce3d9b3f5 910 ProSitePatterns PS00450 Aconitase family signature 1. 446 462 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 78 132 4.3E-15 T 26-04-2016 IPR020603 MraZ domain PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 1.9E-16 T 26-04-2016 IPR020603 MraZ domain PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 132 5.0E-63 T 26-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 136 8.4E-45 T 26-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 SUPERFAMILY SSF89447 2 136 8.27E-44 T 26-04-2016 PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 54.967 T 26-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PAM18_RS23055 9f0652c37da236107089333afda01a3f 151 PANTHER PTHR34701 2 151 9.2E-62 T 26-04-2016 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 PANTHER PTHR30204 1 132 5.4E-23 T 26-04-2016 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 PANTHER PTHR30204:SF1 1 132 5.4E-23 T 26-04-2016 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 SUPERFAMILY SSF46955 5 121 2.49E-24 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 Gene3D G3DSA:1.10.1660.10 4 58 1.4E-20 T 26-04-2016 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 SMART SM00422 5 72 2.4E-17 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 Gene3D G3DSA:1.10.1660.10 59 122 7.5E-17 T 26-04-2016 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 Pfam PF13411 MerR HTH family regulatory protein 5 70 4.3E-16 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS15530 352ebdd38253781d834369952ed91d04 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 Pfam PF00106 short chain dehydrogenase 3 185 1.7E-42 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 166 0.0014 T 26-04-2016 PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 SUPERFAMILY SSF51735 3 247 6.18E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.6E-19 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.6E-19 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.6E-19 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.6E-19 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.6E-19 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PANTHER PTHR24322:SF330 145 177 1.1E-40 T 26-04-2016 PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PANTHER PTHR24322:SF330 6 129 1.1E-40 T 26-04-2016 PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 8.2E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 8.2E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 8.2E-6 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PANTHER PTHR24322 145 177 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 PANTHER PTHR24322 6 129 1.1E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS15105 9409fba3799929e13985a1ecdc563b6a 251 Gene3D G3DSA:3.40.50.720 4 246 1.4E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24075 94e5362339339766533704167383560f 374 PANTHER PTHR18895 81 374 7.4E-148 T 26-04-2016 PAM18_RS24075 94e5362339339766533704167383560f 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS24075 94e5362339339766533704167383560f 374 SUPERFAMILY SSF53335 199 356 2.48E-23 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24075 94e5362339339766533704167383560f 374 PIRSF PIRSF037565 1 374 1.1E-142 T 26-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS24075 94e5362339339766533704167383560f 374 PANTHER PTHR18895:SF6 81 374 7.4E-148 T 26-04-2016 PAM18_RS24075 94e5362339339766533704167383560f 374 Pfam PF05175 Methyltransferase small domain 201 371 9.3E-51 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PAM18_RS24075 94e5362339339766533704167383560f 374 SUPERFAMILY SSF53335 43 161 8.94E-5 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24075 94e5362339339766533704167383560f 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 45.699 T 26-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS24075 94e5362339339766533704167383560f 374 Gene3D G3DSA:3.40.50.150 230 349 1.3E-18 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 SUPERFAMILY SSF47616 81 211 8.1E-27 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 PANTHER PTHR11260:SF289 1 210 3.1E-85 T 26-04-2016 PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 Gene3D G3DSA:1.20.1050.10 89 210 5.4E-45 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 1.7E-13 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 PANTHER PTHR11260 1 210 3.1E-85 T 26-04-2016 PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 SUPERFAMILY SSF52833 1 90 1.17E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 1.3E-87 T 26-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 PAM18_RS13215 68968c322e52fb57cc246f8aaa12c7a5 214 Gene3D G3DSA:3.40.30.10 1 88 1.0E-26 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 SMART SM00388 233 299 9.6E-19 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 Gene3D G3DSA:3.30.565.10 287 444 1.6E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 SUPERFAMILY SSF47384 216 300 1.96E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 SMART SM00387 342 453 2.1E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 Pfam PF00672 HAMP domain 160 229 2.2E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PANTHER PTHR24423 173 444 6.3E-84 T 26-04-2016 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PANTHER PTHR24423 45 118 6.3E-84 T 26-04-2016 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 SUPERFAMILY SSF55874 288 445 6.02E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 1.34E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 1.34E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 1.34E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 Gene3D G3DSA:1.10.287.130 225 286 2.9E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 449 2.5E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 299 2.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PANTHER PTHR24423:SF354 173 444 6.3E-84 T 26-04-2016 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 PANTHER PTHR24423:SF354 45 118 6.3E-84 T 26-04-2016 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 1 449 2.4E-178 T 26-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 PAM18_RS18895 cbb1ad78bfca716e58166ced22b81da3 471 SMART SM00304 179 232 2.2E-6 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.30.70.270 379 540 1.2E-50 T 26-04-2016 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00267 366 537 2.6E-55 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF55073 382 539 5.49E-48 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 PANTHER PTHR10799:SF710 266 538 1.1E-34 T 26-04-2016 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 PANTHER PTHR10799 266 538 1.1E-34 T 26-04-2016 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 2.1E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 136 243 8.4E-6 T 26-04-2016 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 249 373 3.7E-27 T 26-04-2016 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 533 3.2E-41 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00448 250 363 2.8E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00072 Response regulator receiver domain 252 363 1.2E-21 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 134 243 3.22E-5 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS25360 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 246 378 7.26E-30 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS17365 aa67ba0526521bd7f841e7dcfdaf206f 135 Pfam PF04965 Gene 25-like lysozyme 26 113 1.5E-15 T 26-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PAM18_RS17365 aa67ba0526521bd7f841e7dcfdaf206f 135 Gene3D G3DSA:3.10.450.40 23 123 2.7E-12 T 26-04-2016 PAM18_RS17365 aa67ba0526521bd7f841e7dcfdaf206f 135 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 134 2.1E-38 T 26-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein PAM18_RS17365 aa67ba0526521bd7f841e7dcfdaf206f 135 SUPERFAMILY SSF160719 24 128 4.45E-19 T 26-04-2016 PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 PANTHER PTHR10859 5 316 1.3E-143 T 26-04-2016 PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 1 327 63.692 T 26-04-2016 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53|UniPathway: UPA00030|UniPathway: UPA00036 PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 PANTHER PTHR10859:SF49 5 316 1.3E-143 T 26-04-2016 PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 Pfam PF00535 Glycosyl transferase family 2 10 172 3.7E-32 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 Gene3D G3DSA:3.90.550.10 8 143 1.4E-26 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS07380 578fface42d1c6eb19ca207c8ccf718e 339 SUPERFAMILY SSF53448 8 255 1.39E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS11645 77caa54ae61f5f9bb92c5f143ff1d134 281 Gene3D G3DSA:3.40.50.300 9 200 1.9E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11645 77caa54ae61f5f9bb92c5f143ff1d134 281 SMART SM00382 25 183 7.9E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS11645 77caa54ae61f5f9bb92c5f143ff1d134 281 SUPERFAMILY SSF52540 8 249 2.29E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11645 77caa54ae61f5f9bb92c5f143ff1d134 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 1.5E-13 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS11645 77caa54ae61f5f9bb92c5f143ff1d134 281 PANTHER PTHR22908 1 235 3.9E-79 T 26-04-2016 PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 Gene3D G3DSA:3.40.50.300 115 336 2.6E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 PANTHER PTHR24031:SF261 107 500 8.5E-173 T 26-04-2016 PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 118 500 53.172 T 26-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 Gene3D G3DSA:3.40.50.300 337 491 7.2E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 Pfam PF00271 Helicase conserved C-terminal domain 353 462 2.8E-29 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 PANTHER PTHR24031 107 500 8.5E-173 T 26-04-2016 PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 SMART SM00487 138 345 4.8E-52 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 274 282 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 SMART SM00490 381 462 2.0E-32 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 Pfam PF00270 DEAD/DEAH box helicase 143 318 4.0E-48 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS05465 0fa2a287a8d98c46a9546439ac2e7e3e 507 SUPERFAMILY SSF52540 194 478 1.84E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 Pfam PF00672 HAMP domain 195 264 3.4E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 2.5E-11 T 26-04-2016 IPR024478 4HB MCP domain PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 4.1E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 4.1E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 4.1E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 4.1E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 SMART SM00283 269 544 9.4E-66 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 Gene3D G3DSA:1.10.287.950 300 514 1.8E-57 T 26-04-2016 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 SMART SM00304 214 268 4.8E-11 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PANTHER PTHR32089:SF34 163 168 1.2E-131 T 26-04-2016 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PANTHER PTHR32089:SF34 188 545 1.2E-131 T 26-04-2016 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PANTHER PTHR32089 163 168 1.2E-131 T 26-04-2016 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 PANTHER PTHR32089 188 545 1.2E-131 T 26-04-2016 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 543 2.6E-48 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS10480 d02d1db9135e602a97b7b8e47e51f4df 545 SUPERFAMILY SSF58104 236 545 6.67E-77 T 26-04-2016 PAM18_RS01270 db50f31f88af3049f6adfc9ea13866da 233 PANTHER PTHR37314:SF1 7 233 3.5E-97 T 26-04-2016 PAM18_RS01270 db50f31f88af3049f6adfc9ea13866da 233 Pfam PF06912 Protein of unknown function (DUF1275) 29 217 2.0E-32 T 26-04-2016 IPR010699 Protein of unknown function DUF1275 PAM18_RS01270 db50f31f88af3049f6adfc9ea13866da 233 PANTHER PTHR37314 7 233 3.5E-97 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Gene3D G3DSA:1.20.1600.10 356 470 2.7E-104 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Gene3D G3DSA:1.20.1600.10 53 90 2.7E-104 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Gene3D G3DSA:1.20.1600.10 145 318 2.7E-104 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 PANTHER PTHR30203:SF3 5 479 1.2E-223 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 SUPERFAMILY SSF56954 55 472 4.05E-113 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 SUPERFAMILY SSF56954 4 29 4.05E-113 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 469 2.2E-119 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Gene3D G3DSA:2.20.200.10 100 144 1.2E-23 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Gene3D G3DSA:2.20.200.10 319 354 1.2E-23 T 26-04-2016 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Pfam PF02321 Outer membrane efflux protein 64 257 1.6E-26 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 Pfam PF02321 Outer membrane efflux protein 286 467 8.9E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS10905 1b7501a5dc052e119678ccaeb3892f3e 479 PANTHER PTHR30203 5 479 1.2E-223 T 26-04-2016 PAM18_RS05200 c2e87b80dbc7175007bb15be503aeea5 150 Gene3D G3DSA:3.90.1170.40 2 148 1.8E-53 T 26-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05200 c2e87b80dbc7175007bb15be503aeea5 150 SUPERFAMILY SSF54690 3 148 5.1E-51 T 26-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05200 c2e87b80dbc7175007bb15be503aeea5 150 Pfam PF02391 MoaE protein 6 119 8.2E-35 T 26-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS05200 c2e87b80dbc7175007bb15be503aeea5 150 PANTHER PTHR23404 25 150 5.2E-39 T 26-04-2016 PAM18_RS05200 c2e87b80dbc7175007bb15be503aeea5 150 PANTHER PTHR23404:SF2 25 150 5.2E-39 T 26-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PANTHER PTHR39322 3 203 7.4E-99 T 26-04-2016 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PANTHER PTHR39322:SF1 3 203 7.4E-99 T 26-04-2016 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 Gene3D G3DSA:3.40.630.30 7 190 2.6E-58 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 Pfam PF00765 Autoinducer synthase 14 187 1.1E-29 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 SUPERFAMILY SSF55729 4 193 8.48E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PRINTS PR01549 Autoinducer synthesis protein signature 20 39 6.4E-16 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PRINTS PR01549 Autoinducer synthesis protein signature 99 111 6.4E-16 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PRINTS PR01549 Autoinducer synthesis protein signature 144 165 6.4E-16 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 PRINTS PR01549 Autoinducer synthesis protein signature 66 84 6.4E-16 T 26-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS18925 8c95e3ee97c2b8971c460c752bc358a8 203 ProSitePatterns PS00949 Autoinducer synthase family signature. 24 49 - T 26-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF47203 243 401 3.87E-44 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 393 1.9E-32 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.10.540.10 1 130 1.8E-38 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:2.40.110.10 131 234 6.2E-40 T 26-04-2016 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 PANTHER PTHR10909 1 396 1.8E-242 T 26-04-2016 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.20.140.10 235 399 1.2E-46 T 26-04-2016 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 PANTHER PTHR10909:SF282 1 396 1.8E-242 T 26-04-2016 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 6.5E-18 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 233 5.8E-20 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS12825 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF56645 1 258 1.44E-72 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 306 50.153 T 26-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 PIRSF PIRSF026649 1 306 6.0E-106 T 26-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 306 1.2E-134 T 26-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 PANTHER PTHR30606 1 312 6.9E-187 T 26-04-2016 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 297 1.6E-87 T 26-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PAM18_RS08870 fa7582f9d08f8fb6a05dea9f5bed2e8d 312 PANTHER PTHR30606:SF5 1 312 6.9E-187 T 26-04-2016 PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 SUPERFAMILY SSF52540 4 337 3.43E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 Gene3D G3DSA:3.40.50.300 102 344 5.1E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 PANTHER PTHR30486 1 375 4.5E-189 T 26-04-2016 PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 PANTHER PTHR30486:SF3 1 375 4.5E-189 T 26-04-2016 PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 1.8E-135 T 26-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 PAM18_RS02005 95200c2e7a68344b67e480be156cb6a5 382 Pfam PF00437 Type II/IV secretion system protein 113 268 3.2E-35 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 PANTHER PTHR13326 23 341 2.4E-65 T 26-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 340 6.7E-18 T 26-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 23 172 7.7E-38 T 26-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 SUPERFAMILY SSF55120 13 342 1.14E-94 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 9 345 26.918 T 26-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS06680 b8cceced6410fa4b5e16c92be5e93717 355 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 81 94 - T 26-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS12305 e0c3425185fe69e70a0a7621fe6ffd53 377 Pfam PF12698 ABC-2 family transporter protein 33 366 3.6E-46 T 26-04-2016 PAM18_RS12305 e0c3425185fe69e70a0a7621fe6ffd53 377 PANTHER PTHR30294 5 345 4.6E-80 T 26-04-2016 PAM18_RS12305 e0c3425185fe69e70a0a7621fe6ffd53 377 PANTHER PTHR30294:SF17 5 345 4.6E-80 T 26-04-2016 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 110 127 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 28 50 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 130 153 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 154 172 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 75 96 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 173 194 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 198 221 1.7E-60 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 SMART SM00244 21 178 4.5E-63 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PANTHER PTHR10264 8 243 3.0E-106 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 Pfam PF01145 SPFH domain / Band 7 family 26 194 2.3E-34 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 SUPERFAMILY SSF117892 52 185 3.53E-43 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS02280 19f0947abcb7652be0159e6833b18290 264 PANTHER PTHR10264:SF60 8 243 3.0E-106 T 26-04-2016 PAM18_RS00410 710fe50abf3aad8fdb61c248f1fae595 154 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 143 3.1E-44 T 26-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN PAM18_RS00410 710fe50abf3aad8fdb61c248f1fae595 154 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 1.1E-49 T 26-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN PAM18_RS00410 710fe50abf3aad8fdb61c248f1fae595 154 PANTHER PTHR37625:SF2 1 151 3.7E-70 T 26-04-2016 PAM18_RS00410 710fe50abf3aad8fdb61c248f1fae595 154 PANTHER PTHR37625 1 151 3.7E-70 T 26-04-2016 PAM18_RS20945 12a666862a73977bcabcef862a8ae05b 307 PANTHER PTHR12366:SF25 13 244 1.3E-115 T 26-04-2016 PAM18_RS20945 12a666862a73977bcabcef862a8ae05b 307 PANTHER PTHR12366 13 244 1.3E-115 T 26-04-2016 PAM18_RS20945 12a666862a73977bcabcef862a8ae05b 307 Gene3D G3DSA:2.60.120.330 125 223 1.8E-16 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS20945 12a666862a73977bcabcef862a8ae05b 307 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 1.0E-46 T 26-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PAM18_RS20945 12a666862a73977bcabcef862a8ae05b 307 SUPERFAMILY SSF51197 100 222 2.75E-17 T 26-04-2016 PAM18_RS02270 5b0db52fdde49e54b64615127a9b3cb1 540 PANTHER PTHR11101:SF61 56 539 0.0 T 26-04-2016 PAM18_RS02270 5b0db52fdde49e54b64615127a9b3cb1 540 Pfam PF01384 Phosphate transporter family 254 529 8.3E-45 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS02270 5b0db52fdde49e54b64615127a9b3cb1 540 Pfam PF01384 Phosphate transporter family 84 236 5.2E-35 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS02270 5b0db52fdde49e54b64615127a9b3cb1 540 PANTHER PTHR11101 56 539 0.0 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS15050 4a0e50dc8f8d10456bafd35730462088 313 PANTHER PTHR18866:SF74 158 271 3.2E-45 T 26-04-2016 PAM18_RS15050 4a0e50dc8f8d10456bafd35730462088 313 PANTHER PTHR18866 158 271 3.2E-45 T 26-04-2016 PAM18_RS15050 4a0e50dc8f8d10456bafd35730462088 313 Pfam PF02626 Allophanate hydrolase subunit 2 31 292 2.5E-73 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS15050 4a0e50dc8f8d10456bafd35730462088 313 SUPERFAMILY SSF50891 200 294 6.07E-6 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS15050 4a0e50dc8f8d10456bafd35730462088 313 SMART SM00797 30 311 4.3E-117 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 PANTHER PTHR18804:SF11 1 50 1.2E-21 T 26-04-2016 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 PANTHER PTHR18804 1 50 1.2E-21 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.3E-7 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 SUPERFAMILY SSF57840 1 41 3.92E-13 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 Pfam PF00444 Ribosomal protein L36 1 41 1.2E-15 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS07130 eae65437ed93f03f672c12b3ab00c495 50 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.637 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.996 T 26-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF54736 51 122 2.62E-24 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.3E-45 T 26-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 95 2.0E-13 T 26-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:3.30.1390.10 52 122 1.9E-32 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.7E-29 T 26-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.5E-17 T 26-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:1.20.5.710 2 51 3.1E-22 T 26-04-2016 PAM18_RS03385 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF48300 4 58 2.22E-15 T 26-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 179 397 1.6E-46 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 PANTHER PTHR30404:SF1 6 437 6.0E-118 T 26-04-2016 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF01476 LysM domain 426 468 1.5E-10 T 26-04-2016 IPR018392 LysM domain PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF53187 324 401 1.26E-54 T 26-04-2016 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF53187 177 273 1.26E-54 T 26-04-2016 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 SMART SM00257 425 468 5.7E-12 T 26-04-2016 IPR018392 LysM domain PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 PANTHER PTHR30404 6 437 6.0E-118 T 26-04-2016 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Gene3D G3DSA:3.10.350.10 425 469 2.6E-15 T 26-04-2016 IPR018392 LysM domain PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF11741 AMIN domain 34 133 6.8E-23 T 26-04-2016 IPR021731 AMIN domain PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Gene3D G3DSA:3.40.630.40 325 401 4.9E-59 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 Gene3D G3DSA:3.40.630.40 177 274 4.9E-59 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 SMART SM00646 239 397 1.8E-71 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS25890 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF54106 425 468 4.32E-10 T 26-04-2016 IPR018392 LysM domain PAM18_RS24605 01e6aa4c18d2f1629f88369a5120b671 109 PANTHER PTHR39586 3 109 4.0E-42 T 26-04-2016 PAM18_RS24605 01e6aa4c18d2f1629f88369a5120b671 109 Pfam PF04287 tRNA pseudouridine synthase C 8 104 3.7E-33 T 26-04-2016 IPR023376 YqcC-like domain PAM18_RS24605 01e6aa4c18d2f1629f88369a5120b671 109 SUPERFAMILY SSF158452 7 106 4.84E-34 T 26-04-2016 IPR023376 YqcC-like domain PAM18_RS24605 01e6aa4c18d2f1629f88369a5120b671 109 PIRSF PIRSF006257 2 108 8.5E-40 T 26-04-2016 IPR007384 Protein of unknown function UCP006257 PAM18_RS24605 01e6aa4c18d2f1629f88369a5120b671 109 Gene3D G3DSA:1.20.1440.40 8 105 2.7E-33 T 26-04-2016 IPR023376 YqcC-like domain PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 599 3.2E-19 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Gene3D G3DSA:1.10.1040.10 501 600 3.8E-16 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 1.9E-59 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 PANTHER PTHR23309 5 714 0.0 T 26-04-2016 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 SUPERFAMILY SSF48179 622 714 3.4E-18 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 PANTHER PTHR23309:SF19 5 714 0.0 T 26-04-2016 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 SUPERFAMILY SSF51735 316 497 1.55E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 SUPERFAMILY SSF52096 3 297 4.98E-61 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 SUPERFAMILY SSF48179 498 640 1.7E-21 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 203 1.3E-31 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Gene3D G3DSA:3.40.50.720 307 500 4.6E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Gene3D G3DSA:1.10.1040.10 636 714 8.2E-12 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS16970 e218a152f782fe6af67132f73141f804 714 Gene3D G3DSA:3.90.226.10 2 204 8.5E-54 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 243 7.5E-59 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 PANTHER PTHR23417:SF14 17 243 1.5E-79 T 26-04-2016 PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 Pfam PF02390 Putative methyltransferase 69 238 4.9E-55 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 Gene3D G3DSA:3.40.50.150 64 199 5.5E-13 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 243 29.803 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 PANTHER PTHR23417 17 243 1.5E-79 T 26-04-2016 PAM18_RS01930 dc02cd8b658f0a2163eead4c07cc1383 244 SUPERFAMILY SSF53335 22 242 9.36E-41 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26500 fe6b4748ea4c43b9e966898fc0f13814 111 PANTHER PTHR21256 3 109 4.8E-45 T 26-04-2016 PAM18_RS26500 fe6b4748ea4c43b9e966898fc0f13814 111 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 4.1E-29 T 26-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PAM18_RS26500 fe6b4748ea4c43b9e966898fc0f13814 111 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 95 1.6E-17 T 26-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PAM18_RS26500 fe6b4748ea4c43b9e966898fc0f13814 111 SUPERFAMILY SSF101386 3 96 6.32E-25 T 26-04-2016 PAM18_RS26500 fe6b4748ea4c43b9e966898fc0f13814 111 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 21.011 T 26-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 PANTHER PTHR24064:SF234 3 431 1.0E-195 T 26-04-2016 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 Pfam PF07690 Major Facilitator Superfamily 29 396 1.4E-50 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 SUPERFAMILY SSF103473 10 433 1.05E-78 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 Gene3D G3DSA:1.20.1250.20 18 202 7.6E-37 T 26-04-2016 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 Gene3D G3DSA:1.20.1250.20 253 431 4.4E-28 T 26-04-2016 PAM18_RS15580 b1c0b62f8db310672706ac1f1914512f 450 PANTHER PTHR24064 3 431 1.0E-195 T 26-04-2016 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 6.48E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 6.48E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 PANTHER PTHR11751:SF353 108 481 3.5E-151 T 26-04-2016 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 Gene3D G3DSA:1.10.10.10 17 85 3.3E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 SMART SM00345 24 83 5.4E-13 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 Pfam PF00155 Aminotransferase class I and II 149 417 6.3E-16 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 SUPERFAMILY SSF46785 15 92 2.4E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 Gene3D G3DSA:3.40.640.10 147 365 2.0E-60 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 SUPERFAMILY SSF53383 119 480 2.56E-86 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 Gene3D G3DSA:3.10.180.10 399 471 6.9E-4 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.7E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28375 65aad15bfd490203ea873b848bf1384d 491 PANTHER PTHR11751 108 481 3.5E-151 T 26-04-2016 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 SMART SM00342 177 259 7.2E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 SUPERFAMILY SSF51215 21 138 9.81E-15 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 167 206 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 Gene3D G3DSA:2.60.120.280 20 144 1.0E-9 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 PANTHER PTHR11019 12 263 3.1E-75 T 26-04-2016 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 Gene3D G3DSA:1.10.10.60 215 261 7.8E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 SUPERFAMILY SSF46689 213 261 4.48E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 Pfam PF12833 Helix-turn-helix domain 183 260 8.1E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 SUPERFAMILY SSF46689 161 211 8.51E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 Pfam PF02311 AraC-like ligand binding domain 12 140 5.4E-21 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 PANTHER PTHR11019:SF105 12 263 3.1E-75 T 26-04-2016 PAM18_RS02105 2eae560dde6da3ec9e43e89c34691ff6 264 Gene3D G3DSA:1.10.10.60 157 214 6.1E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 Gene3D G3DSA:3.90.550.10 1 270 3.9E-94 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 2.0E-76 T 26-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 Gene3D G3DSA:2.60.120.10 357 471 1.8E-47 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 468 3.2E-233 T 26-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 PANTHER PTHR12526 151 288 3.4E-111 T 26-04-2016 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 PANTHER PTHR12526 351 471 3.4E-111 T 26-04-2016 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 SUPERFAMILY SSF51182 184 469 4.67E-88 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 SUPERFAMILY SSF53448 1 281 8.56E-69 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 PANTHER PTHR12526:SF387 151 288 3.4E-111 T 26-04-2016 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 PANTHER PTHR12526:SF387 351 471 3.4E-111 T 26-04-2016 PAM18_RS07390 88a3326f25027043d59e8cb7c28f413c 481 Pfam PF00483 Nucleotidyl transferase 3 286 5.8E-77 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS04040 87f714d9f9794f235d8ec76ceb73a7e4 203 Pfam PF01810 LysE type translocator 14 195 7.4E-17 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS04040 87f714d9f9794f235d8ec76ceb73a7e4 203 PANTHER PTHR30086:SF12 1 202 1.4E-38 T 26-04-2016 PAM18_RS04040 87f714d9f9794f235d8ec76ceb73a7e4 203 PANTHER PTHR30086 1 202 1.4E-38 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS03715 877d7450b24ff61c5aa40704a412f33e 162 SUPERFAMILY SSF54427 19 148 1.43E-24 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS03715 877d7450b24ff61c5aa40704a412f33e 162 Gene3D G3DSA:3.10.450.50 9 160 5.8E-50 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS03715 877d7450b24ff61c5aa40704a412f33e 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 14 162 3.0E-85 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS03715 877d7450b24ff61c5aa40704a412f33e 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 1.3E-89 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Gene3D G3DSA:3.50.50.60 192 320 4.0E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Gene3D G3DSA:3.50.50.60 472 535 4.0E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Gene3D G3DSA:3.50.50.60 2 129 4.0E-117 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 64.937 T 26-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF51905 1 295 1.23E-88 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF51905 478 537 1.23E-88 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Pfam PF05199 GMC oxidoreductase 395 529 2.2E-41 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 2.8E-281 T 26-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF54373 297 479 3.24E-64 T 26-04-2016 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 Pfam PF00732 GMC oxidoreductase 5 302 1.1E-95 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 PANTHER PTHR11552 1 555 4.9E-260 T 26-04-2016 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 PANTHER PTHR11552:SF135 1 555 4.9E-260 T 26-04-2016 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 PIRSF PIRSF000137 1 540 5.1E-136 T 26-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS28080 b9e94aa14de7fe593c4fb92d96d502c6 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 264 372 8.0E-12 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908 638 678 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908 117 189 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908 247 610 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908 762 942 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 SUPERFAMILY SSF56003 797 942 1.27E-122 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 SUPERFAMILY SSF56003 638 742 1.27E-122 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 SUPERFAMILY SSF56003 264 610 1.27E-122 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 452 552 2.8E-57 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 808 942 2.8E-57 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 265 602 1.1E-52 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 708 881 3.1E-16 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908:SF71 638 678 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908:SF71 117 189 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908:SF71 247 610 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 PANTHER PTHR11908:SF71 762 942 2.2E-239 T 26-04-2016 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 791 807 6.4E-21 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 553 717 6.4E-21 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 Gene3D G3DSA:3.30.365.10 375 451 5.7E-7 T 26-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 PAM18_RS24100 6482fdbf023cd2156662486d08debd1f 943 SUPERFAMILY SSF54665 52 174 4.53E-12 T 26-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAM18_RS27825 a005462231fc494d6b37ced60d5d8882 425 SUPERFAMILY SSF51419 57 294 1.57E-19 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS27825 a005462231fc494d6b37ced60d5d8882 425 Pfam PF01168 Alanine racemase, N-terminal domain 56 294 6.8E-25 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS27825 a005462231fc494d6b37ced60d5d8882 425 Gene3D G3DSA:3.20.20.10 114 218 3.1E-8 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 Gene3D G3DSA:3.40.50.1980 27 129 4.5E-25 T 26-04-2016 PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 Gene3D G3DSA:3.40.50.1980 130 269 3.9E-21 T 26-04-2016 PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 SUPERFAMILY SSF53807 27 286 9.03E-49 T 26-04-2016 PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 PANTHER PTHR30535 25 290 1.7E-101 T 26-04-2016 PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 PANTHER PTHR30535:SF4 25 290 1.7E-101 T 26-04-2016 PAM18_RS24655 4487bb50557cfacb535fdb61225c74d6 297 Pfam PF01497 Periplasmic binding protein 31 263 2.4E-31 T 26-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 Gene3D G3DSA:1.10.1740.10 3 77 1.7E-17 T 26-04-2016 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 162 1.8E-26 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 Gene3D G3DSA:1.10.10.10 102 165 7.8E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 PANTHER PTHR30173:SF30 3 167 5.1E-82 T 26-04-2016 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 Pfam PF08281 Sigma-70, region 4 108 158 1.8E-18 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 PANTHER PTHR30173 3 167 5.1E-82 T 26-04-2016 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 Pfam PF04542 Sigma-70 region 2 9 76 2.5E-13 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 SUPERFAMILY SSF88946 5 81 4.71E-17 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07995 769b01a8bb29e874401a2ba6f3b6f358 167 SUPERFAMILY SSF88659 91 165 3.71E-15 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07395 d8271356d198452abffaeb37b2936a6c 216 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 13 216 3.0E-113 T 26-04-2016 PAM18_RS07395 d8271356d198452abffaeb37b2936a6c 216 Pfam PF11182 Alginate O-acetyl transferase AlgF 17 194 8.6E-86 T 26-04-2016 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 Gene3D G3DSA:3.40.50.720 2 113 2.9E-27 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 SUPERFAMILY SSF52283 1 133 6.24E-28 T 26-04-2016 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 26-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 PANTHER PTHR10996 1 326 1.3E-144 T 26-04-2016 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 2.8E-27 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 Gene3D G3DSA:3.40.50.720 114 289 8.0E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 SUPERFAMILY SSF51735 99 287 2.75E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 1.4E-62 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS14270 f010833146a561fed9c45b7f118e654d 328 PANTHER PTHR10996:SF118 1 326 1.3E-144 T 26-04-2016 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PANTHER PTHR30126 2 291 9.3E-126 T 26-04-2016 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF03466 LysR substrate binding domain 89 291 2.3E-29 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:3.40.190.10 194 257 1.4E-6 T 26-04-2016 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:1.10.10.10 2 79 3.1E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF46785 5 84 1.68E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PANTHER PTHR30126:SF29 2 291 9.3E-126 T 26-04-2016 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF53850 91 292 2.17E-29 T 26-04-2016 PAM18_RS10690 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:3.40.190.10 80 193 6.5E-11 T 26-04-2016 PAM18_RS11330 6254d8eb5766cc47d494be25ee825e84 114 Pfam PF05899 Protein of unknown function (DUF861) 40 111 3.6E-27 T 26-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS11330 6254d8eb5766cc47d494be25ee825e84 114 PANTHER PTHR33271 39 114 2.5E-26 T 26-04-2016 PAM18_RS11330 6254d8eb5766cc47d494be25ee825e84 114 Gene3D G3DSA:2.60.120.10 21 113 6.3E-34 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS11330 6254d8eb5766cc47d494be25ee825e84 114 SUPERFAMILY SSF51182 16 113 1.69E-20 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS13535 65b6a089b781620f7631edd8854482dd 236 Gene3D G3DSA:3.40.50.1820 150 207 3.2E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13535 65b6a089b781620f7631edd8854482dd 236 Gene3D G3DSA:3.40.50.1820 2 95 3.2E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13535 65b6a089b781620f7631edd8854482dd 236 PANTHER PTHR11487 1 226 7.6E-83 T 26-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 PAM18_RS13535 65b6a089b781620f7631edd8854482dd 236 Pfam PF00975 Thioesterase domain 3 213 5.5E-34 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS13535 65b6a089b781620f7631edd8854482dd 236 SUPERFAMILY SSF53474 2 214 9.99E-39 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 SUPERFAMILY SSF51445 4 177 1.06E-132 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 SUPERFAMILY SSF51445 242 483 1.06E-132 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 SUPERFAMILY SSF51445 520 818 1.06E-132 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357:SF166 723 923 2.4E-166 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357:SF166 252 415 2.4E-166 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357:SF166 17 125 2.4E-166 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 SMART SM00642 12 506 2.2E-6 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 4 918 2.6E-283 T 26-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.30.1590.10 97 180 5.6E-43 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.30.1590.10 246 284 5.6E-43 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.20.20.80 727 849 1.9E-70 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.20.20.80 4 96 1.9E-70 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.20.20.80 300 381 1.9E-70 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:3.20.20.80 570 610 1.9E-70 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:1.10.10.470 612 719 1.3E-27 T 26-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Pfam PF00128 Alpha amylase, catalytic domain 25 107 8.3E-15 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 Gene3D G3DSA:1.10.150.200 403 478 7.4E-6 T 26-04-2016 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357 723 923 2.4E-166 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357 252 415 2.4E-166 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14770 c5efca712c63b5507f2c1f79a82f37b8 926 PANTHER PTHR10357 17 125 2.4E-166 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS26005 ee669fde557f18882398dcc6574f7208 152 PANTHER PTHR38774 2 152 5.3E-58 T 26-04-2016 PAM18_RS26005 ee669fde557f18882398dcc6574f7208 152 PANTHER PTHR38774:SF1 2 152 5.3E-58 T 26-04-2016 PAM18_RS26005 ee669fde557f18882398dcc6574f7208 152 Pfam PF06853 Protein of unknown function (DUF1249) 27 145 8.8E-44 T 26-04-2016 IPR009659 Protein of unknown function DUF1249 PAM18_RS09705 cedf2e5eb1a9707e8ced2c7a0dd8ccf4 543 PANTHER PTHR40940:SF1 1 543 3.2E-130 T 26-04-2016 PAM18_RS09705 cedf2e5eb1a9707e8ced2c7a0dd8ccf4 543 PANTHER PTHR40940 1 543 3.2E-130 T 26-04-2016 PAM18_RS09705 cedf2e5eb1a9707e8ced2c7a0dd8ccf4 543 Pfam PF13584 Oxygen tolerance 13 460 5.3E-110 T 26-04-2016 IPR025738 Aerotolerance-related protein BatD PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 Pfam PF00464 Serine hydroxymethyltransferase 10 386 1.0E-180 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 26-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 PANTHER PTHR11680:SF9 1 416 0.0 T 26-04-2016 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 PIRSF PIRSF000412 1 415 2.1E-167 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 SUPERFAMILY SSF53383 7 416 2.3E-181 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 PANTHER PTHR11680 1 416 0.0 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 Gene3D G3DSA:3.90.1150.10 285 416 2.3E-53 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 Gene3D G3DSA:3.40.640.10 37 284 1.5E-107 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS28295 6c59b5edd22c1a03cc487e3c9cec1c06 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.066 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS14595 93e398994b6f19512f981670015b9c40 104 SUPERFAMILY SSF54292 18 100 7.47E-24 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS14595 93e398994b6f19512f981670015b9c40 104 Gene3D G3DSA:3.10.20.30 18 86 1.6E-8 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS14595 93e398994b6f19512f981670015b9c40 104 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 95 1.7E-22 T 26-04-2016 PAM18_RS14100 ff862c18051adda60fa3be6b22538987 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS14100 ff862c18051adda60fa3be6b22538987 81 Gene3D G3DSA:3.30.70.20 16 75 1.0E-15 T 26-04-2016 PAM18_RS14100 ff862c18051adda60fa3be6b22538987 81 SUPERFAMILY SSF54862 9 74 1.47E-14 T 26-04-2016 PAM18_RS14100 ff862c18051adda60fa3be6b22538987 81 Pfam PF13187 4Fe-4S dicluster domain 28 71 1.8E-8 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS18570 5ded08586bdaee2e91ea148b9112841f 143 Pfam PF03928 Haem-degrading 4 133 9.4E-27 T 26-04-2016 IPR005624 Haem-degrading PAM18_RS18570 5ded08586bdaee2e91ea148b9112841f 143 PANTHER PTHR34309 1 143 3.2E-88 T 26-04-2016 PAM18_RS18570 5ded08586bdaee2e91ea148b9112841f 143 SUPERFAMILY SSF143744 2 136 2.35E-34 T 26-04-2016 PAM18_RS18570 5ded08586bdaee2e91ea148b9112841f 143 PANTHER PTHR34309:SF3 1 143 3.2E-88 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 144 161 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 301 317 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 109 129 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 76 92 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 390 405 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 1.7E-41 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 Gene3D G3DSA:3.40.630.10 4 86 3.9E-120 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 Gene3D G3DSA:3.40.630.10 223 424 3.9E-120 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 PANTHER PTHR28570 1 425 1.1E-199 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 SUPERFAMILY SSF53187 214 423 3.48E-107 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 SUPERFAMILY SSF53187 4 87 3.48E-107 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 12 423 3.9E-138 T 26-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 Gene3D G3DSA:2.30.250.10 87 220 3.5E-45 T 26-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 SUPERFAMILY SSF101821 88 213 1.19E-32 T 26-04-2016 PAM18_RS08845 368ac16c74378a96dfdc252dda54ea26 429 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 425 60.391 T 26-04-2016 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 SUPERFAMILY SSF51905 1 304 1.13E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 Gene3D G3DSA:3.50.50.60 154 304 2.1E-8 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 1.5E-15 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.5E-15 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.5E-15 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-15 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 2.3E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PANTHER PTHR22912 1 320 6.1E-102 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PIRSF PIRSF037495 1 416 4.1E-104 T 26-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 2.2E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.2E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 2.2E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.2E-10 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 PANTHER PTHR22912:SF141 1 320 6.1E-102 T 26-04-2016 PAM18_RS19250 d47eeecf93beecebd7959edc73e931b5 417 Gene3D G3DSA:3.40.50.720 3 153 1.3E-23 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27325 4ef7f8687759cdb74cd5394ee2b986fc 104 PANTHER PTHR34981:SF1 3 104 2.8E-28 T 26-04-2016 PAM18_RS27325 4ef7f8687759cdb74cd5394ee2b986fc 104 PANTHER PTHR34981 3 104 2.8E-28 T 26-04-2016 PAM18_RS27325 4ef7f8687759cdb74cd5394ee2b986fc 104 SUPERFAMILY SSF102829 7 96 3.14E-25 T 26-04-2016 IPR007838 Cell division protein ZapA-like PAM18_RS27325 4ef7f8687759cdb74cd5394ee2b986fc 104 Pfam PF05164 Cell division protein ZapA 8 90 3.1E-23 T 26-04-2016 IPR007838 Cell division protein ZapA-like PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 SUPERFAMILY SSF55620 7 120 2.48E-30 T 26-04-2016 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 Pfam PF02152 Dihydroneopterin aldolase 11 119 1.7E-25 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 SMART SM00905 11 121 1.1E-32 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 PANTHER PTHR20941:SF6 1 119 6.7E-69 T 26-04-2016 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 Gene3D G3DSA:3.30.1130.10 7 119 7.2E-36 T 26-04-2016 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 PANTHER PTHR20941 1 119 6.7E-69 T 26-04-2016 PAM18_RS07850 d243245aec86c699a165b8d264972dab 123 TIGRFAM TIGR00526 folB_dom: FolB domain 8 119 1.5E-31 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS25235 f418b7f78cbb7054c1351b997fadd156 324 PANTHER PTHR10859 1 318 2.0E-150 T 26-04-2016 PAM18_RS25235 f418b7f78cbb7054c1351b997fadd156 324 SUPERFAMILY SSF53448 17 275 8.81E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS25235 f418b7f78cbb7054c1351b997fadd156 324 Gene3D G3DSA:3.90.550.10 16 137 1.9E-22 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS25235 f418b7f78cbb7054c1351b997fadd156 324 Pfam PF00535 Glycosyl transferase family 2 18 179 1.2E-27 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS25235 f418b7f78cbb7054c1351b997fadd156 324 PANTHER PTHR10859:SF86 1 318 2.0E-150 T 26-04-2016 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 Gene3D G3DSA:3.40.50.1820 35 305 1.6E-66 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PANTHER PTHR10992 1 306 2.7E-62 T 26-04-2016 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00412 Epoxide hydrolase signature 88 103 2.9E-8 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00412 Epoxide hydrolase signature 281 303 2.9E-8 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00412 Epoxide hydrolase signature 147 160 2.9E-8 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 SUPERFAMILY SSF53474 37 304 7.12E-64 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 1.2E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 250 264 1.2E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 1.2E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 103 1.2E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10330 6930004b96da1c89a301b644e62aadda 315 Pfam PF12697 Alpha/beta hydrolase family 65 298 2.1E-26 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Pfam PF04359 Protein of unknown function (DUF493) 10 93 2.2E-27 T 26-04-2016 IPR007454 Uncharacterised protein family UPF0250 PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 PANTHER PTHR38036:SF1 2 93 1.9E-40 T 26-04-2016 PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 PANTHER PTHR38036 2 93 1.9E-40 T 26-04-2016 PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 93 25.298 T 26-04-2016 IPR007454 Uncharacterised protein family UPF0250 PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Gene3D G3DSA:3.30.70.1460 8 93 1.7E-27 T 26-04-2016 IPR027471 YbeD-like domain PAM18_RS04790 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 SUPERFAMILY SSF117991 7 93 4.32E-25 T 26-04-2016 IPR027471 YbeD-like domain PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 PANTHER PTHR24567 1 211 4.9E-135 T 26-04-2016 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00100 3 126 2.5E-27 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 26-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00027 Cyclic nucleotide-binding domain 22 114 4.8E-22 T 26-04-2016 IPR000595 Cyclic nucleotide-binding domain PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF46785 143 211 6.0E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:2.60.120.10 12 141 1.8E-38 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 PANTHER PTHR24567:SF27 1 211 4.9E-135 T 26-04-2016 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 31 47 - T 26-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 93 - T 26-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00419 164 212 6.6E-15 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00325 Bacterial regulatory proteins, crp family 170 200 2.9E-14 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF51206 12 141 1.22E-34 T 26-04-2016 IPR018490 Cyclic nucleotide-binding-like PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 3.3E-9 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 3.3E-9 T 26-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PAM18_RS03210 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:1.10.10.10 143 211 7.2E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PANTHER PTHR11717:SF7 1 147 5.0E-60 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 Gene3D G3DSA:3.40.50.270 1 147 1.8E-50 T 26-04-2016 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 147 2.6E-40 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 SMART SM00226 1 149 7.1E-47 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PANTHER PTHR11717 1 147 5.0E-60 T 26-04-2016 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 SUPERFAMILY SSF52788 1 147 2.09E-47 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 5.4E-23 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 5.4E-23 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 5.4E-23 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PAM18_RS10185 a597c9f80fb3d4503e23c0d1ddf5f915 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 5.4E-23 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF00924 Mechanosensitive ion channel 67 262 1.5E-49 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:2.30.30.60 124 173 1.3E-19 T 26-04-2016 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 PANTHER PTHR30221:SF7 1 278 8.0E-102 T 26-04-2016 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF50182 109 174 5.89E-18 T 26-04-2016 IPR010920 LSM domain PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 PANTHER PTHR30221 1 278 8.0E-102 T 26-04-2016 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82861 25 107 1.57E-16 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 138 172 - T 26-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:3.30.70.100 177 260 7.7E-23 T 26-04-2016 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82689 177 272 2.35E-26 T 26-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PAM18_RS22920 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF05552 Conserved TM helix 15 59 7.6E-8 T 26-04-2016 IPR008910 Conserved TM helix PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 SUPERFAMILY SSF50249 10 73 1.88E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 PANTHER PTHR33991 3 233 3.9E-53 T 26-04-2016 PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 Hamap MF_00201 DNA repair protein RecO [recO]. 3 228 19.615 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 145 9.7E-19 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 SUPERFAMILY SSF57863 84 142 1.7E-8 T 26-04-2016 PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 Gene3D G3DSA:2.40.50.140 11 72 4.3E-5 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 Pfam PF11967 Recombination protein O N terminal 7 73 2.8E-15 T 26-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal PAM18_RS21780 116013059469cdde61ce6cf83c8f2fb9 233 Pfam PF02565 Recombination protein O C terminal 80 222 9.3E-23 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 PANTHER PTHR22602 4 287 5.0E-59 T 26-04-2016 PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 SUPERFAMILY SSF103025 4 225 1.49E-53 T 26-04-2016 PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 171 235 7.3E-26 T 26-04-2016 IPR017703 YgfZ/GcvT conserved site PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 PANTHER PTHR22602:SF0 4 287 5.0E-59 T 26-04-2016 PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 Gene3D G3DSA:3.30.70.1400 14 98 5.6E-28 T 26-04-2016 PAM18_RS21850 c0040b433cd3374c0f213bc40b680518 314 SUPERFAMILY SSF101790 228 307 1.11E-14 T 26-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAM18_RS17115 105e2871f62bcf1874e9dedccba56e66 390 Pfam PF04888 Secretion system effector C (SseC) like family 112 385 4.2E-52 T 26-04-2016 IPR006972 Secretion system effector C, SseC-like GO:0009405 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 SUPERFAMILY SSF55174 5 49 1.44E-10 T 26-04-2016 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 PANTHER PTHR21600 1 236 7.9E-163 T 26-04-2016 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 SMART SM00363 5 65 3.4E-5 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 PANTHER PTHR21600:SF21 1 236 7.9E-163 T 26-04-2016 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 Pfam PF01479 S4 domain 6 45 1.0E-6 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 SUPERFAMILY SSF55120 65 235 1.13E-20 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS20040 02c919327c40d8f87863905698de5317 236 Gene3D G3DSA:3.10.290.10 3 66 9.0E-19 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PANTHER PTHR10055:SF11 1 337 1.5E-224 T 26-04-2016 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 Pfam PF00579 tRNA synthetases class I (W and Y) 3 241 1.2E-49 T 26-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 334 37.095 T 26-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PANTHER PTHR10055 1 337 1.5E-224 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 SUPERFAMILY SSF160113 356 398 2.49E-6 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 333 4.2E-93 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.4E-17 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-17 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.4E-17 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.4E-17 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 Gene3D G3DSA:3.40.50.620 3 213 2.1E-71 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 Gene3D G3DSA:1.10.240.10 214 300 7.1E-24 T 26-04-2016 PAM18_RS23145 072b32bda59b9d8df4d5ca05caa89dcd 448 SUPERFAMILY SSF52374 4 333 3.05E-75 T 26-04-2016 PAM18_RS04375 73edcfdd8f4d4a0ead241b03ace4c510 381 SUPERFAMILY SSF49401 242 380 2.39E-17 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS04375 73edcfdd8f4d4a0ead241b03ace4c510 381 Pfam PF00419 Fimbrial protein 241 380 1.3E-7 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS04375 73edcfdd8f4d4a0ead241b03ace4c510 381 PANTHER PTHR33420 250 381 4.1E-12 T 26-04-2016 PAM18_RS04375 73edcfdd8f4d4a0ead241b03ace4c510 381 Gene3D G3DSA:2.60.40.1090 243 380 4.5E-16 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Pfam PF02597 ThiS family 3 66 3.8E-17 T 26-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Gene3D G3DSA:3.10.20.30 1 66 3.9E-30 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 PANTHER PTHR34472 1 66 1.9E-28 T 26-04-2016 PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 SUPERFAMILY SSF54285 2 65 5.5E-20 T 26-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 PANTHER PTHR34472:SF1 1 66 1.9E-28 T 26-04-2016 PAM18_RS01920 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.2E-24 T 26-04-2016 IPR010035 ThiS, thiamine-biosynthesis PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 312 7.0E-110 T 26-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 SUPERFAMILY SSF51556 2 312 1.7E-84 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 Hamap MF_01962 Adenine deaminase. 4 316 86.708 T 26-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 PANTHER PTHR11409:SF41 1 312 6.9E-174 T 26-04-2016 PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 PANTHER PTHR11409 1 312 6.9E-174 T 26-04-2016 PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 Pfam PF00962 Adenosine/AMP deaminase 8 310 2.1E-72 T 26-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 PAM18_RS00750 974a1c1b44d5fb72e9a1f9e2fe58b495 316 Gene3D G3DSA:3.20.20.140 4 313 2.9E-99 T 26-04-2016 PAM18_RS18180 fd330fc23689aa249103a2bc6bbdb695 137 PANTHER PTHR33990 1 135 4.5E-56 T 26-04-2016 PAM18_RS18180 fd330fc23689aa249103a2bc6bbdb695 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 131 1.6E-10 T 26-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PAM18_RS18180 fd330fc23689aa249103a2bc6bbdb695 137 Gene3D G3DSA:3.10.180.10 7 135 2.6E-48 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS18180 fd330fc23689aa249103a2bc6bbdb695 137 SUPERFAMILY SSF54593 1 134 2.6E-38 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS18180 fd330fc23689aa249103a2bc6bbdb695 137 PANTHER PTHR33990:SF1 1 135 4.5E-56 T 26-04-2016 PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 Pfam PF13439 Glycosyltransferase Family 4 14 165 6.4E-15 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 Gene3D G3DSA:3.40.50.2000 174 303 2.5E-17 T 26-04-2016 PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 PANTHER PTHR12526:SF363 1 324 2.9E-66 T 26-04-2016 PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 SUPERFAMILY SSF53756 1 327 6.63E-64 T 26-04-2016 PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 Pfam PF13692 Glycosyl transferases group 1 180 292 7.9E-18 T 26-04-2016 PAM18_RS08990 d548aa8e9291155e55c9eea4c85e000c 351 PANTHER PTHR12526 1 324 2.9E-66 T 26-04-2016 PAM18_RS27910 4731f17cda6cfa0a2f8cef4521922801 283 PANTHER PTHR10366 4 279 1.0E-41 T 26-04-2016 PAM18_RS27910 4731f17cda6cfa0a2f8cef4521922801 283 SUPERFAMILY SSF51735 1 279 8.32E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27910 4731f17cda6cfa0a2f8cef4521922801 283 PANTHER PTHR10366:SF430 4 279 1.0E-41 T 26-04-2016 PAM18_RS27910 4731f17cda6cfa0a2f8cef4521922801 283 Gene3D G3DSA:3.40.50.720 2 231 7.0E-21 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27910 4731f17cda6cfa0a2f8cef4521922801 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 164 1.5E-7 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SUPERFAMILY SSF47384 685 757 4.51E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Gene3D G3DSA:1.10.287.130 688 756 3.9E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00388 690 760 1.6E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PANTHER PTHR24423 111 916 4.4E-275 T 26-04-2016 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00091 433 502 3.4 T 26-04-2016 IPR000014 PAS domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00091 561 627 8.8E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00387 802 916 1.2E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SUPERFAMILY SSF55785 546 671 2.79E-18 T 26-04-2016 IPR000014 PAS domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Gene3D G3DSA:3.30.450.20 550 671 3.3E-18 T 26-04-2016 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PANTHER PTHR24423:SF485 111 916 4.4E-275 T 26-04-2016 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 557 682 1.7E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SUPERFAMILY SSF55874 751 916 6.02E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SUPERFAMILY SSF55785 418 547 5.59E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 874 9.8E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 895 9.8E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 860 9.8E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 PRINTS PR00344 Bacterial sensor protein C-terminal signature 900 913 9.8E-16 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Gene3D G3DSA:3.30.450.20 301 416 2.5E-8 T 26-04-2016 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Gene3D G3DSA:3.30.565.10 758 916 1.1E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 803 915 8.2E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Pfam PF08447 PAS fold 460 541 1.0E-8 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Pfam PF08448 PAS fold 567 676 1.1E-8 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00086 507 549 5.6 T 26-04-2016 IPR001610 PAC motif PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00086 381 421 21.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 SMART SM00086 633 675 490.0 T 26-04-2016 IPR001610 PAC motif PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Gene3D G3DSA:3.30.450.20 417 549 8.0E-19 T 26-04-2016 PAM18_RS22400 7bd2aac777f886caa4153ee327f67552 923 Pfam PF00512 His Kinase A (phospho-acceptor) domain 690 756 1.2E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 Pfam PF10102 Domain of unknown function (DUF2341) 71 154 7.2E-22 T 26-04-2016 IPR018765 Domain of unknown function DUF2341 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 Gene3D G3DSA:2.60.120.200 141 341 6.8E-16 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 PANTHER PTHR30625 133 615 0.0 T 26-04-2016 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 PANTHER PTHR30625:SF3 133 615 0.0 T 26-04-2016 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 Pfam PF01618 MotA/TolQ/ExbB proton channel family 468 581 1.8E-27 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 197 341 9.4E-14 T 26-04-2016 PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 SMART SM00560 201 344 0.0064 T 26-04-2016 IPR006558 LamG-like jellyroll fold PAM18_RS22190 254de69afa769cd5d22921c8dd4f2f00 615 SUPERFAMILY SSF49899 135 344 3.91E-23 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 SMART SM00155 216 243 1.7E-4 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 SMART SM00155 390 417 3.1E-6 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 PANTHER PTHR21248:SF9 16 477 1.1E-246 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 PANTHER PTHR21248 16 477 1.1E-246 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Pfam PF13396 Phospholipase_D-nuclease N-terminal 17 58 5.9E-5 T 26-04-2016 IPR027379 Cardiolipin synthase N-terminal PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Hamap MF_00190 Cardiolipin synthase A [clsA]. 1 477 45.123 T 26-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 477 2.0E-110 T 26-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 SUPERFAMILY SSF56024 268 456 4.71E-47 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Gene3D G3DSA:3.30.870.10 317 474 2.1E-38 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Gene3D G3DSA:3.30.870.10 109 311 7.0E-46 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 SUPERFAMILY SSF56024 100 306 1.29E-50 T 26-04-2016 PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Pfam PF13091 PLD-like domain 136 276 2.6E-7 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS28190 37c4c767924973dbd8e18de1a8b5a053 477 Pfam PF13091 PLD-like domain 318 443 6.1E-27 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS11695 12810856ac6476724e98067c8b59c573 93 TIGRFAM TIGR03510 XapX: XapX domain 4 48 4.5E-19 T 26-04-2016 IPR020017 XapX domain PAM18_RS11695 12810856ac6476724e98067c8b59c573 93 Pfam PF07235 Protein of unknown function (DUF1427) 2 83 2.4E-36 T 26-04-2016 IPR009872 Protein of unknown function DUF1427 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 Pfam PF02561 Flagellar protein FliS 8 124 9.2E-38 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 PANTHER PTHR34773 1 124 1.5E-40 T 26-04-2016 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 PIRSF PIRSF039090 1 126 1.2E-43 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 SUPERFAMILY SSF101116 8 124 6.28E-39 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 Gene3D G3DSA:1.20.120.340 7 125 3.4E-40 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS20115 cd8d587771b50fe735eefcc014aa9560 126 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 2.0E-27 T 26-04-2016 IPR003713 Flagellar protein FliS GO:0044780 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 SUPERFAMILY SSF47233 100 231 3.01E-51 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PANTHER PTHR10339:SF23 284 398 6.4E-38 T 26-04-2016 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PANTHER PTHR10339 284 398 6.4E-38 T 26-04-2016 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 Gene3D G3DSA:1.20.120.260 99 231 5.9E-52 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 Gene3D G3DSA:3.90.176.10 264 401 1.2E-20 T 26-04-2016 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 215 232 1.0E-27 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 23 36 1.0E-27 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 181 199 1.0E-27 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 132 149 1.0E-27 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 39 56 1.0E-27 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 Pfam PF03496 ADP-ribosyltransferase exoenzyme 246 432 1.2E-30 T 26-04-2016 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 SUPERFAMILY SSF56399 230 427 6.17E-33 T 26-04-2016 PAM18_RS00230 1909400225d841ce22f63b358544a75e 457 Pfam PF03545 Yersinia virulence determinant (YopE) 132 201 2.7E-33 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 Gene3D G3DSA:1.10.10.60 2 60 1.1E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.0E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.0E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 PANTHER PTHR30328 1 186 7.5E-63 T 26-04-2016 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 SUPERFAMILY SSF48498 80 180 3.61E-21 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 SUPERFAMILY SSF46689 1 72 1.49E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 Gene3D G3DSA:1.10.357.10 61 180 3.0E-33 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 PANTHER PTHR30328:SF18 1 186 7.5E-63 T 26-04-2016 PAM18_RS25300 09128be4b532e280d8754f975a8c115c 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.0E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS00665 52686d1e87b65186fb45bbd7babd221e 95 SUPERFAMILY SSF51182 4 91 5.2E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS00665 52686d1e87b65186fb45bbd7babd221e 95 Pfam PF07883 Cupin domain 23 90 7.7E-8 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS00665 52686d1e87b65186fb45bbd7babd221e 95 Gene3D G3DSA:2.60.120.10 7 91 1.5E-12 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 Gene3D G3DSA:3.40.190.10 90 178 6.3E-24 T 26-04-2016 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 Pfam PF03466 LysR substrate binding domain 88 292 8.2E-42 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 SUPERFAMILY SSF46785 2 87 2.18E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 Gene3D G3DSA:1.10.10.10 3 85 7.3E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 PANTHER PTHR30346:SF6 1 292 1.1E-109 T 26-04-2016 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 SUPERFAMILY SSF53850 88 295 3.49E-37 T 26-04-2016 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 PANTHER PTHR30346 1 292 1.1E-109 T 26-04-2016 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.7E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 Gene3D G3DSA:3.40.190.10 179 268 2.6E-27 T 26-04-2016 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27280 7b34a17d0c9199ffeefb9bb35eaa1272 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19845 7f7da39d2d59a546b471fe1bb2f3fccf 496 Pfam PF13520 Amino acid permease 27 463 9.6E-41 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19845 7f7da39d2d59a546b471fe1bb2f3fccf 496 PIRSF PIRSF006060 9 487 3.5E-54 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19845 7f7da39d2d59a546b471fe1bb2f3fccf 496 PANTHER PTHR11785 4 483 9.7E-80 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS19845 7f7da39d2d59a546b471fe1bb2f3fccf 496 PANTHER PTHR11785:SF342 4 483 9.7E-80 T 26-04-2016 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 Gene3D G3DSA:1.10.10.10 4 83 3.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 PANTHER PTHR30126:SF15 3 309 1.6E-146 T 26-04-2016 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 Gene3D G3DSA:3.40.190.10 181 263 7.6E-13 T 26-04-2016 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 Gene3D G3DSA:3.40.190.10 93 180 5.7E-21 T 26-04-2016 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 SUPERFAMILY SSF53850 90 298 1.72E-40 T 26-04-2016 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 SUPERFAMILY SSF46785 4 87 1.41E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 Pfam PF03466 LysR substrate binding domain 90 295 4.1E-40 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15810 ae18a263e6cf70d97f979f1dce9169dd 311 PANTHER PTHR30126 3 309 1.6E-146 T 26-04-2016 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 Gene3D G3DSA:3.30.465.10 106 211 1.9E-25 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 Pfam PF01565 FAD binding domain 58 183 1.3E-22 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 SUPERFAMILY SSF56176 37 211 8.88E-41 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 Pfam PF04030 D-arabinono-1,4-lactone oxidase 208 458 3.6E-68 T 26-04-2016 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 PANTHER PTHR13878:SF5 36 457 1.4E-113 T 26-04-2016 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 41 462 1.0E-140 T 26-04-2016 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 PANTHER PTHR13878 36 457 1.4E-113 T 26-04-2016 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 PIRSF PIRSF000136 32 463 7.3E-90 T 26-04-2016 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 PAM18_RS27830 49ef42172ec172ebbb1ff2f52fdbbf52 464 Gene3D G3DSA:3.30.43.10 40 105 6.5E-15 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS22840 11f0a0eeeff2d6662967efbb317f4dcc 227 Pfam PF13649 Methyltransferase domain 56 151 2.2E-13 T 26-04-2016 PAM18_RS22840 11f0a0eeeff2d6662967efbb317f4dcc 227 Gene3D G3DSA:3.40.50.150 13 208 4.6E-23 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS22840 11f0a0eeeff2d6662967efbb317f4dcc 227 PANTHER PTHR10108 8 223 1.2E-74 T 26-04-2016 PAM18_RS22840 11f0a0eeeff2d6662967efbb317f4dcc 227 SUPERFAMILY SSF53335 11 224 1.31E-27 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS22840 11f0a0eeeff2d6662967efbb317f4dcc 227 PANTHER PTHR10108:SF855 8 223 1.2E-74 T 26-04-2016 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 PANTHER PTHR33154 5 100 8.4E-26 T 26-04-2016 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 SUPERFAMILY SSF46785 3 83 1.85E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 3.5E-13 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 SMART SM00418 6 84 2.3E-30 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.7E-22 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.7E-22 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 5.7E-22 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.7E-22 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS14200 10bc5979fc5b23f2f33f04ee890ef805 116 Gene3D G3DSA:1.10.10.10 4 84 6.9E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 SUPERFAMILY SSF55326 1 138 2.09E-34 T 26-04-2016 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 PIRSF PIRSF005303 1 317 5.2E-78 T 26-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 SUPERFAMILY SSF56042 143 303 6.49E-35 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 PANTHER PTHR30270:SF0 1 322 5.2E-120 T 26-04-2016 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 Gene3D G3DSA:3.30.1330.10 1 141 1.6E-45 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 PANTHER PTHR30270 1 322 5.2E-120 T 26-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 297 4.5E-6 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 314 29.918 T 26-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 Gene3D G3DSA:3.90.650.10 145 317 6.1E-42 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 5.2E-95 T 26-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 PAM18_RS04525 60fa0e75c27e79f153459edd8908c743 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.1E-24 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 SUPERFAMILY SSF52540 22 202 4.23E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 PANTHER PTHR11649 13 213 4.3E-55 T 26-04-2016 PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 26.989 T 26-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 198 5.6E-69 T 26-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 Pfam PF01926 50S ribosome-binding GTPase 33 150 3.6E-17 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 PAM18_RS28690 00ccd95a8ab3be873e1dbfe22cd170fa 215 Gene3D G3DSA:3.40.50.300 15 202 3.0E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 SUPERFAMILY SSF46689 10 78 1.6E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 SUPERFAMILY SSF48498 91 177 7.71E-6 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 PANTHER PTHR30055 4 171 2.2E-28 T 26-04-2016 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 5.2E-12 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 PANTHER PTHR30055:SF92 4 171 2.2E-28 T 26-04-2016 PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS04910 da89cdf3069b65fcf663e4f8f01c1397 215 Gene3D G3DSA:1.10.357.10 8 209 7.5E-30 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 Pfam PF00733 Asparagine synthase 257 626 1.1E-118 T 26-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 1.1E-137 T 26-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 SUPERFAMILY SSF56235 1 222 3.17E-61 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 Gene3D G3DSA:3.40.50.620 233 393 1.6E-92 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 Gene3D G3DSA:3.40.50.620 476 625 1.6E-92 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 SUPERFAMILY SSF52402 245 397 2.99E-89 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 SUPERFAMILY SSF52402 481 621 2.99E-89 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 Gene3D G3DSA:3.60.20.10 1 232 3.8E-64 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 PIRSF PIRSF001589 1 627 1.7E-156 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 Pfam PF13537 Glutamine amidotransferase domain 51 173 3.8E-42 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 PANTHER PTHR11772:SF10 472 626 8.5E-180 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 PANTHER PTHR11772:SF10 2 399 8.5E-180 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 PANTHER PTHR11772 472 626 8.5E-180 T 26-04-2016 PAM18_RS09310 1e0dbbc24b08abb7a87b762c91b01ab1 627 PANTHER PTHR11772 2 399 8.5E-180 T 26-04-2016 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 2.4E-254 T 26-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.229 T 26-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF52540 75 346 6.71E-92 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 PANTHER PTHR15184:SF44 1 458 0.0 T 26-04-2016 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 SMART SM00382 140 325 1.2E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.5E-20 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:3.40.50.300 74 341 4.2E-109 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 1.8E-63 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:2.40.10.170 2 72 3.4E-28 T 26-04-2016 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF47917 343 457 1.28E-53 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF50615 2 72 1.39E-23 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 PANTHER PTHR15184 1 458 0.0 T 26-04-2016 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:1.10.1140.10 343 458 1.6E-56 T 26-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS29040 1dfc8527acf239598835e56fdf7ee8b4 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 PAM18_RS01625 9cb9d2906fe5bf39ad806852b0976090 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 259 2.5E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01625 9cb9d2906fe5bf39ad806852b0976090 262 SUPERFAMILY SSF161098 6 260 1.83E-57 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01625 9cb9d2906fe5bf39ad806852b0976090 262 PANTHER PTHR30222 13 262 1.8E-166 T 26-04-2016 PAM18_RS01625 9cb9d2906fe5bf39ad806852b0976090 262 Gene3D G3DSA:1.10.3720.10 16 261 2.8E-60 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01625 9cb9d2906fe5bf39ad806852b0976090 262 PANTHER PTHR30222:SF7 13 262 1.8E-166 T 26-04-2016 PAM18_RS06795 2dce231ff2710a05938cca1ff5cb311e 288 Pfam PF02195 ParB-like nuclease domain 43 89 6.6E-6 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS06795 2dce231ff2710a05938cca1ff5cb311e 288 SUPERFAMILY SSF109709 128 207 1.57E-13 T 26-04-2016 PAM18_RS06795 2dce231ff2710a05938cca1ff5cb311e 288 Gene3D G3DSA:3.90.1530.10 44 91 8.0E-6 T 26-04-2016 PAM18_RS06795 2dce231ff2710a05938cca1ff5cb311e 288 SUPERFAMILY SSF110849 44 113 2.79E-6 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 SMART SM00450 11 126 4.9E-17 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 SMART SM00450 149 267 5.0E-22 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 Pfam PF00581 Rhodanese-like domain 151 263 1.6E-16 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 Pfam PF00581 Rhodanese-like domain 13 122 1.3E-13 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 PANTHER PTHR11364:SF0 11 271 6.7E-70 T 26-04-2016 PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 PANTHER PTHR11364 11 271 6.7E-70 T 26-04-2016 PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 26-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 Gene3D G3DSA:3.40.250.10 8 135 6.9E-33 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 ProSitePatterns PS00683 Rhodanese C-terminal signature. 251 261 - T 26-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 SUPERFAMILY SSF52821 145 270 2.62E-29 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 SUPERFAMILY SSF52821 3 132 2.1E-31 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS25935 62a55a8ea15bef9153641305b15215f4 271 Gene3D G3DSA:3.40.250.10 149 270 6.4E-33 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS14505 270df9adf902060daf5e1fb4dd6418c2 319 Pfam PF04909 Amidohydrolase 10 300 9.5E-40 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS14505 270df9adf902060daf5e1fb4dd6418c2 319 PANTHER PTHR21240 5 310 1.3E-138 T 26-04-2016 PAM18_RS14505 270df9adf902060daf5e1fb4dd6418c2 319 PANTHER PTHR21240:SF9 5 310 1.3E-138 T 26-04-2016 PAM18_RS14505 270df9adf902060daf5e1fb4dd6418c2 319 SUPERFAMILY SSF51556 8 300 3.57E-46 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS14505 270df9adf902060daf5e1fb4dd6418c2 319 Gene3D G3DSA:3.20.20.140 6 300 1.6E-56 T 26-04-2016 PAM18_RS12190 d24551fa3b7258a6b3f8afe0d4fed805 201 Gene3D G3DSA:1.20.5.440 1 45 6.9E-16 T 26-04-2016 PAM18_RS12190 d24551fa3b7258a6b3f8afe0d4fed805 201 Pfam PF05995 Cysteine dioxygenase type I 45 160 6.0E-8 T 26-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 PAM18_RS12190 d24551fa3b7258a6b3f8afe0d4fed805 201 PANTHER PTHR12918 4 201 7.9E-42 T 26-04-2016 PAM18_RS12190 d24551fa3b7258a6b3f8afe0d4fed805 201 SUPERFAMILY SSF51182 9 196 4.69E-55 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS12190 d24551fa3b7258a6b3f8afe0d4fed805 201 Gene3D G3DSA:2.60.120.10 46 185 1.3E-40 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS05840 08fb7efa57598dacfe86be9acb9a73e1 282 PANTHER PTHR21666 104 277 3.9E-42 T 26-04-2016 PAM18_RS05840 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.60.40.1590 26 123 6.0E-39 T 26-04-2016 PAM18_RS05840 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.70.70.10 130 278 9.3E-45 T 26-04-2016 PAM18_RS05840 08fb7efa57598dacfe86be9acb9a73e1 282 SUPERFAMILY SSF51261 85 277 2.62E-49 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS05840 08fb7efa57598dacfe86be9acb9a73e1 282 Pfam PF01551 Peptidase family M23 179 273 8.9E-29 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 Pfam PF00775 Dioxygenase 105 291 2.9E-67 T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 Pfam PF04444 Catechol dioxygenase N terminus 27 95 1.0E-22 T 26-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 PANTHER PTHR33711 1 310 3.7E-157 T 26-04-2016 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 SUPERFAMILY SSF49482 4 293 1.06E-95 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 PANTHER PTHR33711:SF4 1 310 3.7E-157 T 26-04-2016 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 Gene3D G3DSA:2.60.130.10 2 308 1.8E-106 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS13050 983776a287c1cd64098bba6c08a341ba 310 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 290 4.1E-141 T 26-04-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 4.5E-24 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 3.1E-52 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PANTHER PTHR11451:SF3 397 571 6.2E-161 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PANTHER PTHR11451:SF3 4 244 6.2E-161 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Gene3D G3DSA:3.40.50.800 471 570 2.1E-27 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-19 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-19 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-19 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-19 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 SUPERFAMILY SSF55681 405 476 4.06E-108 T 26-04-2016 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 SUPERFAMILY SSF55681 10 237 4.06E-108 T 26-04-2016 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 7.6E-255 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Gene3D G3DSA:3.90.960.10 253 386 4.4E-28 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 SUPERFAMILY SSF55826 218 388 4.71E-29 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PANTHER PTHR11451 397 571 6.2E-161 T 26-04-2016 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PANTHER PTHR11451 4 244 6.2E-161 T 26-04-2016 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Pfam PF03129 Anticodon binding domain 473 567 2.7E-16 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 SUPERFAMILY SSF52954 461 570 2.78E-28 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.628 T 26-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 PIRSF PIRSF001535 1 571 1.8E-271 T 26-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Gene3D G3DSA:3.30.930.10 387 470 6.0E-108 T 26-04-2016 PAM18_RS20835 9dfbf71645689805005d6030225b2a41 571 Gene3D G3DSA:3.30.930.10 10 234 6.0E-108 T 26-04-2016 PAM18_RS24810 81075996d791d34250ee46b1137f5ce9 65 PIRSF PIRSF039008 1 65 3.5E-32 T 26-04-2016 IPR026042 Stress response protein YjbJ PAM18_RS24810 81075996d791d34250ee46b1137f5ce9 65 Gene3D G3DSA:1.10.1470.10 1 64 1.5E-28 T 26-04-2016 IPR008462 CsbD-like PAM18_RS24810 81075996d791d34250ee46b1137f5ce9 65 PANTHER PTHR34977 1 65 4.8E-17 T 26-04-2016 PAM18_RS24810 81075996d791d34250ee46b1137f5ce9 65 Pfam PF05532 CsbD-like 4 55 4.0E-20 T 26-04-2016 IPR008462 CsbD-like PAM18_RS24810 81075996d791d34250ee46b1137f5ce9 65 SUPERFAMILY SSF69047 1 64 3.79E-25 T 26-04-2016 IPR008462 CsbD-like PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 Gene3D G3DSA:3.40.190.10 181 266 2.1E-22 T 26-04-2016 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 SUPERFAMILY SSF46785 8 115 1.36E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 SUPERFAMILY SSF53850 92 300 1.35E-37 T 26-04-2016 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 Gene3D G3DSA:3.40.190.10 95 180 5.9E-18 T 26-04-2016 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.79E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.79E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.79E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 Gene3D G3DSA:1.10.10.10 7 88 7.4E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 PANTHER PTHR30537 1 298 4.3E-110 T 26-04-2016 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 Pfam PF03466 LysR substrate binding domain 91 298 5.0E-36 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.2E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18305 80d3fea31544f873dd68427c1474fd90 302 PANTHER PTHR30537:SF5 1 298 4.3E-110 T 26-04-2016 PAM18_RS08150 1f63197adac2f74fda13b375d42059b2 152 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 11 151 5.1E-54 T 26-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PAM18_RS08150 1f63197adac2f74fda13b375d42059b2 152 Pfam PF06754 Phosphonate metabolism protein PhnG 12 150 1.9E-55 T 26-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 PAM18_RS25215 57d12964cd130070f6c9c17de2de2677 149 PANTHER PTHR34821 1 148 1.4E-51 T 26-04-2016 PAM18_RS25215 57d12964cd130070f6c9c17de2de2677 149 PANTHER PTHR34821:SF2 1 148 1.4E-51 T 26-04-2016 PAM18_RS25215 57d12964cd130070f6c9c17de2de2677 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 8 144 1.1E-40 T 26-04-2016 IPR006750 Putative inner membrane exporter, YdcZ PAM18_RS05115 225b9d440f4f5dbb46f376332a8c602c 653 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 43 488 9.1E-156 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS05115 225b9d440f4f5dbb46f376332a8c602c 653 PANTHER PTHR30047:SF6 1 653 0.0 T 26-04-2016 PAM18_RS05115 225b9d440f4f5dbb46f376332a8c602c 653 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 5 490 1.0E-180 T 26-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 PAM18_RS05115 225b9d440f4f5dbb46f376332a8c602c 653 ProSitePatterns PS01303 BCCT family of transporters signature. 306 315 - T 26-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS05115 225b9d440f4f5dbb46f376332a8c602c 653 PANTHER PTHR30047 1 653 0.0 T 26-04-2016 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 7.0E-6 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 7.0E-6 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 SUPERFAMILY SSF52540 132 371 5.33E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Gene3D G3DSA:1.10.8.60 303 356 3.5E-23 T 26-04-2016 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 1.5E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Pfam PF00158 Sigma-54 interaction domain 135 296 8.1E-67 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Gene3D G3DSA:3.40.50.300 138 302 2.3E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Gene3D G3DSA:1.10.10.60 357 375 6.6E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Gene3D G3DSA:1.10.10.60 407 459 6.6E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Gene3D G3DSA:3.40.50.2300 3 137 2.9E-35 T 26-04-2016 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 SUPERFAMILY SSF46689 343 458 1.34E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 Pfam PF00072 Response regulator receiver domain 5 114 2.4E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 PANTHER PTHR32071 1 473 3.7E-290 T 26-04-2016 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 PANTHER PTHR32071:SF21 1 473 3.7E-290 T 26-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 SMART SM00448 3 114 1.3E-33 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 SMART SM00382 150 293 7.7E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS20095 61764447fcb8518e97622ddd97c4ce3e 473 SUPERFAMILY SSF52172 4 174 2.85E-41 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 129 27.977 T 26-04-2016 IPR023006 Uncharacterised protein family UPF0225 PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 Gene3D G3DSA:3.10.450.50 3 153 1.9E-51 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 SUPERFAMILY SSF103642 133 155 3.6E-7 T 26-04-2016 PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 Pfam PF02810 SEC-C motif 136 154 4.2E-7 T 26-04-2016 IPR004027 SEC-C motif PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 SUPERFAMILY SSF54427 25 130 5.38E-33 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS20455 58c71d76a9fce1b576e5f07fc934f6f7 157 PANTHER PTHR33747 10 154 1.9E-25 T 26-04-2016 PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 PANTHER PTHR30543:SF8 1 186 2.2E-113 T 26-04-2016 PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 Gene3D G3DSA:3.40.50.360 2 173 4.1E-32 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 4.7E-79 T 26-04-2016 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 SUPERFAMILY SSF52218 1 176 4.35E-34 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 Pfam PF03358 NADPH-dependent FMN reductase 6 150 5.8E-30 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PAM18_RS13805 44a5b11ac20873ad8efa803be349c6ee 186 PANTHER PTHR30543 1 186 2.2E-113 T 26-04-2016 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 13 222 39.398 T 26-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 13 218 1.3E-69 T 26-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 18 217 2.9E-65 T 26-04-2016 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 SUPERFAMILY SSF53335 14 218 3.31E-43 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 143 158 - T 26-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 PANTHER PTHR11579 7 218 2.5E-89 T 26-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 PAM18_RS06690 acae582e0df1fa97691a3e050747853e 222 Gene3D G3DSA:3.40.50.150 27 218 1.4E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 PANTHER PTHR11601 1 374 4.1E-154 T 26-04-2016 PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 Gene3D G3DSA:3.90.1150.10 269 373 5.7E-16 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 Gene3D G3DSA:3.40.640.10 26 268 4.2E-59 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 Pfam PF00266 Aminotransferase class-V 16 348 2.8E-52 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 SUPERFAMILY SSF53383 7 374 7.98E-81 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS10285 ecedde3d1024357d12fc3cab3b29c258 377 PANTHER PTHR11601:SF31 1 374 4.1E-154 T 26-04-2016 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 Gene3D G3DSA:1.10.10.60 231 277 7.2E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 Gene3D G3DSA:3.40.50.880 10 230 1.0E-37 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF52317 10 207 1.03E-36 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 Pfam PF12833 Helix-turn-helix domain 248 326 1.7E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 PANTHER PTHR11019:SF61 121 332 1.9E-67 T 26-04-2016 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 PANTHER PTHR11019 121 332 1.9E-67 T 26-04-2016 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF46689 277 328 2.37E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 Gene3D G3DSA:1.10.10.60 278 328 6.8E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 SUPERFAMILY SSF46689 224 275 8.78E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 SMART SM00342 241 324 2.5E-24 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS23130 9e9361042c1c4cf37593f3dad9eb9510 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 320 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 8.8E-52 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 PANTHER PTHR10996 15 318 1.4E-108 T 26-04-2016 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 Gene3D G3DSA:3.40.50.720 17 115 2.4E-28 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 26-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 SUPERFAMILY SSF52283 17 141 9.64E-29 T 26-04-2016 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 PANTHER PTHR10996:SF91 15 318 1.4E-108 T 26-04-2016 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 SUPERFAMILY SSF51735 106 291 3.95E-52 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 320 1.7E-25 T 26-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 PAM18_RS24125 ec04cbed73ae1d9833ae6e4d6c53d8e4 323 Gene3D G3DSA:3.40.50.720 116 291 1.4E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 PANTHER PTHR24220:SF481 24 315 2.6E-199 T 26-04-2016 PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF52540 22 260 4.91E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF50331 255 381 1.25E-15 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 PANTHER PTHR24220 24 315 2.6E-199 T 26-04-2016 PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 Pfam PF00005 ABC transporter 39 180 9.3E-38 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 382 8.1E-129 T 26-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 Gene3D G3DSA:3.40.50.300 15 255 2.3E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 SMART SM00382 47 230 1.2E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS01510 64375893897fefd4c7a79411f630f6a8 384 Pfam PF08402 TOBE domain 300 382 1.4E-16 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 Pfam PF00005 ABC transporter 345 493 5.0E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 SUPERFAMILY SSF52540 321 563 7.83E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 Gene3D G3DSA:3.40.50.300 332 565 3.6E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 PANTHER PTHR24221:SF138 5 567 5.6E-131 T 26-04-2016 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 PANTHER PTHR24221 5 567 5.6E-131 T 26-04-2016 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 SMART SM00382 354 545 1.6E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 Gene3D G3DSA:1.20.1560.10 5 318 6.9E-31 T 26-04-2016 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 SUPERFAMILY SSF90123 5 318 2.35E-35 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS03655 69a90484a0b7aba9cd54152813ee2847 570 Pfam PF00664 ABC transporter transmembrane region 53 182 4.1E-9 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 SUPERFAMILY SSF55931 8 369 2.65E-86 T 26-04-2016 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 377 74.211 T 26-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 11 295 2.7E-115 T 26-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 12 290 1.1E-88 T 26-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 PANTHER PTHR36510 1 375 3.4E-175 T 26-04-2016 PAM18_RS14665 2781b0e33d6e9ce419bba785b4899a50 377 PANTHER PTHR36510:SF1 1 375 3.4E-175 T 26-04-2016 PAM18_RS06460 a5d415a016962dd5ff9ca6e78f2c4a22 615 Pfam PF09822 ABC-type uncharacterized transport system 33 300 4.9E-69 T 26-04-2016 IPR019196 ABC-type uncharacterised transport system PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 PANTHER PTHR30011:SF21 2 355 2.1E-215 T 26-04-2016 PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 Gene3D G3DSA:3.20.20.30 3 355 1.0E-105 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 Pfam PF00296 Luciferase-like monooxygenase 9 328 3.4E-78 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 1.6E-193 T 26-04-2016 IPR024014 Dimethyl sulphone monooxygenase SfnG PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 PANTHER PTHR30011 2 355 2.1E-215 T 26-04-2016 PAM18_RS05010 c2f3fb7b4c7bb88d2148c24877fc460c 364 SUPERFAMILY SSF51679 5 355 1.14E-94 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 322 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 PANTHER PTHR11019:SF54 36 333 2.1E-88 T 26-04-2016 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 Pfam PF12833 Helix-turn-helix domain 249 328 3.0E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 Gene3D G3DSA:1.10.10.60 279 328 4.9E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 Pfam PF14525 AraC-binding-like domain 23 204 5.3E-35 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 SMART SM00342 241 326 5.0E-18 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 SUPERFAMILY SSF46689 225 275 1.21E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 Gene3D G3DSA:1.10.10.60 223 278 6.3E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13030 120af671f5c0775c26609ca9e20b4287 333 PANTHER PTHR11019 36 333 2.1E-88 T 26-04-2016 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Pfam PF00297 Ribosomal protein L3 44 182 3.2E-16 T 26-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 26-04-2016 IPR019926 Ribosomal protein L3, conserved site PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 40.239 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:2.40.30.10 4 33 1.7E-8 T 26-04-2016 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:2.40.30.10 158 207 1.7E-8 T 26-04-2016 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 SUPERFAMILY SSF50447 1 208 1.24E-81 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 1.6E-92 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:4.10.960.10 78 157 2.8E-33 T 26-04-2016 PAM18_RS03425 c5c86202de5c0ef2ca46c2a2421e4f3d 211 PANTHER PTHR11229 1 208 1.5E-118 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 3.2E-47 T 26-04-2016 IPR010016 KipI family PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 SUPERFAMILY SSF160467 3 96 2.35E-16 T 26-04-2016 PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 PANTHER PTHR34698 2 224 2.9E-96 T 26-04-2016 PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 Pfam PF02682 Allophanate hydrolase subunit 1 3 202 1.9E-66 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 Gene3D G3DSA:2.40.100.10 91 221 2.7E-45 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 SMART SM00796 2 202 2.3E-92 T 26-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 PANTHER PTHR34698:SF2 2 224 2.9E-96 T 26-04-2016 PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 SUPERFAMILY SSF50891 91 218 1.78E-41 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS23500 51d43b84893a4ad8029e3db212d71402 225 Gene3D G3DSA:3.30.1360.40 3 77 4.0E-15 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.1740.10 9 82 5.6E-14 T 26-04-2016 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88659 105 164 1.26E-12 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF08281 Sigma-70, region 4 111 163 3.8E-14 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88946 10 100 5.89E-15 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 PANTHER PTHR30173 11 163 5.2E-45 T 26-04-2016 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 162 1.3E-19 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF04542 Sigma-70 region 2 15 80 1.9E-15 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 PANTHER PTHR30173:SF9 11 163 5.2E-45 T 26-04-2016 PAM18_RS05285 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.10.10 109 162 5.7E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 Pfam PF00107 Zinc-binding dehydrogenase 197 265 2.3E-9 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 395 6.9E-229 T 26-04-2016 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 PANTHER PTHR11695 15 397 3.6E-203 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 SUPERFAMILY SSF50129 4 187 2.6E-64 T 26-04-2016 IPR011032 GroES-like PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 1.7E-26 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 Gene3D G3DSA:3.40.50.720 189 312 9.0E-28 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 SUPERFAMILY SSF51735 162 356 1.49E-66 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 PANTHER PTHR11695:SF586 15 397 3.6E-203 T 26-04-2016 PAM18_RS28325 c7f9863475490f33f9b117bbffa7a3b0 399 Gene3D G3DSA:3.90.180.10 5 188 5.1E-47 T 26-04-2016 IPR011032 GroES-like PAM18_RS12630 52e377b59e73388732b159c8a7e27a9e 491 Pfam PF05136 Phage portal protein, lambda family 27 373 2.5E-108 T 26-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 PAM18_RS12630 52e377b59e73388732b159c8a7e27a9e 491 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 25 476 1.4E-101 T 26-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 PAM18_RS27710 ecde048ef575456761d4e00ccc47b439 117 PANTHER PTHR11803 11 117 1.3E-37 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS27710 ecde048ef575456761d4e00ccc47b439 117 SUPERFAMILY SSF55298 9 117 5.97E-33 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS27710 ecde048ef575456761d4e00ccc47b439 117 Gene3D G3DSA:3.30.1330.40 11 116 3.1E-28 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS27710 ecde048ef575456761d4e00ccc47b439 117 Pfam PF01042 Endoribonuclease L-PSP 9 115 8.0E-25 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 1.2E-45 T 26-04-2016 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 Gene3D G3DSA:3.40.190.10 213 249 4.9E-11 T 26-04-2016 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 Gene3D G3DSA:3.40.190.10 8 111 4.9E-11 T 26-04-2016 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 Gene3D G3DSA:3.40.190.10 112 211 4.9E-37 T 26-04-2016 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 SUPERFAMILY SSF53850 25 250 2.84E-64 T 26-04-2016 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 PIRSF PIRSF004846 1 251 5.3E-54 T 26-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 3.9E-78 T 26-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 PAM18_RS16290 ce004169b9a3d8c6eb959e4b702b20ed 251 PANTHER PTHR30632 5 250 2.6E-47 T 26-04-2016 PAM18_RS16910 8c33c45ffcdf2dcf9b4c19818311994f 94 Pfam PF14542 GCN5-related N-acetyl-transferase 15 88 1.0E-22 T 26-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase PAM18_RS16910 8c33c45ffcdf2dcf9b4c19818311994f 94 Gene3D G3DSA:3.40.630.30 2 90 1.1E-31 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS16910 8c33c45ffcdf2dcf9b4c19818311994f 94 PANTHER PTHR31435 1 87 2.8E-42 T 26-04-2016 PAM18_RS16910 8c33c45ffcdf2dcf9b4c19818311994f 94 SUPERFAMILY SSF55729 7 91 3.77E-23 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS16910 8c33c45ffcdf2dcf9b4c19818311994f 94 PANTHER PTHR31435:SF3 1 87 2.8E-42 T 26-04-2016 PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 2.4E-69 T 26-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Pfam PF03358 NADPH-dependent FMN reductase 1 143 3.7E-31 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 SUPERFAMILY SSF52218 1 168 3.26E-29 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Gene3D G3DSA:3.40.50.360 3 172 4.5E-29 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 PANTHER PTHR30543:SF1 1 192 3.5E-48 T 26-04-2016 PAM18_RS07810 fc8884c9c2517fa6ac7db9bbe4d0a233 197 PANTHER PTHR30543 1 192 3.5E-48 T 26-04-2016 PAM18_RS24250 97cb3fb8c48fa3bc954aed888e760ed7 171 PANTHER PTHR37089 1 171 5.8E-96 T 26-04-2016 PAM18_RS24250 97cb3fb8c48fa3bc954aed888e760ed7 171 Pfam PF05229 Spore Coat Protein U domain 24 168 2.8E-35 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24250 97cb3fb8c48fa3bc954aed888e760ed7 171 PANTHER PTHR37089:SF4 1 171 5.8E-96 T 26-04-2016 PAM18_RS24250 97cb3fb8c48fa3bc954aed888e760ed7 171 SMART SM00972 113 168 1.4E-20 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 PANTHER PTHR12532 1 241 4.6E-117 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.6E-102 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 SUPERFAMILY SSF75625 3 246 3.79E-96 T 26-04-2016 IPR029072 YebC-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.70.980 135 205 1.2E-27 T 26-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:1.10.10.200 1 79 4.3E-35 T 26-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Pfam PF01709 Transcriptional regulator 5 237 4.5E-92 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.288 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.1270.10 212 247 1.1E-42 T 26-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PAM18_RS20795 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.1270.10 84 134 1.1E-42 T 26-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 Gene3D G3DSA:3.40.50.300 17 268 3.4E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 PIRSF PIRSF037116 7 271 2.4E-144 T 26-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 PANTHER PTHR24220 21 271 2.8E-141 T 26-04-2016 PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 18 269 2.2E-117 T 26-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 SUPERFAMILY SSF52540 16 267 7.33E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 SMART SM00382 44 242 2.3E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 PANTHER PTHR24220:SF554 21 271 2.8E-141 T 26-04-2016 PAM18_RS08170 4410b03a1b0c58ebe74983d7e8e7e0fe 271 Pfam PF00005 ABC transporter 36 192 2.4E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS16950 a71136095dead36f9e59dc4e57215bba 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 3.7E-12 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS16950 a71136095dead36f9e59dc4e57215bba 123 Gene3D G3DSA:3.40.30.10 50 121 3.6E-22 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS16950 a71136095dead36f9e59dc4e57215bba 123 SUPERFAMILY SSF52833 43 121 5.46E-19 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SUPERFAMILY SSF52540 6 225 1.73E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 PANTHER PTHR24220 8 226 4.5E-123 T 26-04-2016 PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SMART SM00382 35 223 1.8E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Gene3D G3DSA:3.40.50.300 4 226 2.8E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 PANTHER PTHR24220:SF111 8 226 4.5E-123 T 26-04-2016 PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Pfam PF00005 ABC transporter 26 174 8.4E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 3.4E-98 T 26-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 PAM18_RS10140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 Gene3D G3DSA:1.10.3890.10 5 204 1.7E-76 T 26-04-2016 IPR007451 Uncharacterised protein family UPF0274 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 PANTHER PTHR38100 1 206 6.0E-96 T 26-04-2016 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 SUPERFAMILY SSF101322 4 205 2.09E-73 T 26-04-2016 IPR007451 Uncharacterised protein family UPF0274 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 196 2.0E-93 T 26-04-2016 IPR007451 Uncharacterised protein family UPF0274 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 PANTHER PTHR38100:SF1 1 206 6.0E-96 T 26-04-2016 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 Pfam PF04356 Protein of unknown function (DUF489) 7 197 2.0E-70 T 26-04-2016 IPR007451 Uncharacterised protein family UPF0274 PAM18_RS12060 a9ffdc98ca470e2c315f42d12471ac5b 206 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 33.94 T 26-04-2016 IPR007451 Uncharacterised protein family UPF0274 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 PANTHER PTHR30042:SF2 1 178 3.3E-84 T 26-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 Pfam PF02669 K+-transporting ATPase, c chain 6 178 2.9E-61 T 26-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 178 1.9E-56 T 26-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 PIRSF PIRSF001296 1 183 7.9E-64 T 26-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 181 32.691 T 26-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 PAM18_RS17490 b280982ca5bf0207b0f1be3eca729053 183 PANTHER PTHR30042 1 178 3.3E-84 T 26-04-2016 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 SUPERFAMILY SSF56645 1 227 6.94E-58 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 115 1.8E-19 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 PANTHER PTHR10909 1 375 6.9E-101 T 26-04-2016 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Gene3D G3DSA:1.20.140.10 217 375 4.6E-50 T 26-04-2016 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 PANTHER PTHR10909:SF305 1 375 6.9E-101 T 26-04-2016 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.5E-20 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 SUPERFAMILY SSF47203 225 375 3.22E-42 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Gene3D G3DSA:1.10.540.10 1 116 9.1E-24 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 5.9E-38 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS12275 5f42e48a2369a5385f9e79878fb8ca91 377 Gene3D G3DSA:2.40.110.10 120 216 5.4E-29 T 26-04-2016 PAM18_RS28525 1ec71e2eb35485184a554051ab1e78ec 278 Pfam PF08241 Methyltransferase domain 64 158 1.5E-17 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS28525 1ec71e2eb35485184a554051ab1e78ec 278 PANTHER PTHR10108:SF855 40 259 3.2E-76 T 26-04-2016 PAM18_RS28525 1ec71e2eb35485184a554051ab1e78ec 278 PANTHER PTHR10108 40 259 3.2E-76 T 26-04-2016 PAM18_RS28525 1ec71e2eb35485184a554051ab1e78ec 278 Gene3D G3DSA:3.40.50.150 50 276 5.5E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28525 1ec71e2eb35485184a554051ab1e78ec 278 SUPERFAMILY SSF53335 49 229 4.56E-34 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 2.4E-62 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PANTHER PTHR11958 1 405 1.4E-263 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 SUPERFAMILY SSF118215 17 399 1.31E-95 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 Gene3D G3DSA:1.10.3860.10 12 405 8.8E-83 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PANTHER PTHR11958:SF68 1 405 1.4E-263 T 26-04-2016 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.597 T 26-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 43 68 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS15395 49804fa82422b0a0548f89882519fd5a 409 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 8.8E-18 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:1.10.10.10 6 85 2.9E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 SUPERFAMILY SSF46785 7 111 1.04E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 PANTHER PTHR30126:SF26 1 309 1.7E-155 T 26-04-2016 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 PANTHER PTHR30126 1 309 1.7E-155 T 26-04-2016 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Pfam PF03466 LysR substrate binding domain 88 295 9.5E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:3.40.190.10 179 262 2.5E-18 T 26-04-2016 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.3E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 SUPERFAMILY SSF53850 90 298 4.16E-40 T 26-04-2016 PAM18_RS21265 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:3.40.190.10 92 178 4.1E-15 T 26-04-2016 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 215 2.9E-111 T 26-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 Pfam PF13394 4Fe-4S single cluster domain 26 107 1.1E-10 T 26-04-2016 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 SUPERFAMILY SSF102114 27 106 1.12E-14 T 26-04-2016 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 PANTHER PTHR11228:SF6 1 209 1.3E-74 T 26-04-2016 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 Gene3D G3DSA:3.20.20.70 31 105 5.6E-14 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 212 35.977 T 26-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 PANTHER PTHR11228 1 209 1.3E-74 T 26-04-2016 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 Pfam PF04055 Radical SAM superfamily 28 163 1.7E-15 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS20740 0c90616d46490e30159ae587bb496446 215 PIRSF PIRSF000370 3 215 1.9E-67 T 26-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Gene3D G3DSA:3.40.190.10 170 266 1.6E-24 T 26-04-2016 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Pfam PF03466 LysR substrate binding domain 104 295 8.9E-16 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Gene3D G3DSA:1.10.10.10 1 83 5.2E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 SUPERFAMILY SSF46785 2 83 1.36E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Gene3D G3DSA:3.40.190.10 271 300 2.8E-22 T 26-04-2016 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Gene3D G3DSA:3.40.190.10 93 169 2.8E-22 T 26-04-2016 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 SUPERFAMILY SSF53850 93 295 1.01E-31 T 26-04-2016 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-14 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 PANTHER PTHR30118:SF5 1 305 9.8E-191 T 26-04-2016 PAM18_RS10920 4a4a902115ed608500fc2c9a3a83e41d 310 PANTHER PTHR30118 1 305 9.8E-191 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 PANTHER PTHR23501:SF1 1 476 8.2E-293 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 SUPERFAMILY SSF103473 4 197 2.22E-62 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 SUPERFAMILY SSF103473 249 467 2.22E-62 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1250.20 17 193 2.7E-28 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1250.20 264 474 5.7E-17 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 PANTHER PTHR23501 1 476 8.2E-293 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 Pfam PF07690 Major Facilitator Superfamily 20 410 2.2E-48 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 417 4.4E-78 T 26-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.5E-5 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.5E-5 T 26-04-2016 PAM18_RS02315 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.5E-5 T 26-04-2016 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 PANTHER PTHR30328 9 213 6.1E-46 T 26-04-2016 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 Gene3D G3DSA:1.10.357.10 11 203 1.1E-40 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 SUPERFAMILY SSF48498 86 200 9.79E-19 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 Pfam PF13977 Bacterial transcriptional repressor 89 200 1.1E-25 T 26-04-2016 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 PANTHER PTHR30328:SF11 9 213 6.1E-46 T 26-04-2016 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 SUPERFAMILY SSF46689 8 85 1.35E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS26080 69938d237a53a9b816b834124145ad12 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 8.2E-13 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS02475 aa9d1e8d34824e50f79a5b354bde79cd 241 SUPERFAMILY SSF53271 57 238 3.8E-32 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS02475 aa9d1e8d34824e50f79a5b354bde79cd 241 PANTHER PTHR11907:SF9 3 240 1.0E-67 T 26-04-2016 PAM18_RS02475 aa9d1e8d34824e50f79a5b354bde79cd 241 Pfam PF00156 Phosphoribosyl transferase domain 145 238 1.2E-8 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS02475 aa9d1e8d34824e50f79a5b354bde79cd 241 Gene3D G3DSA:3.40.50.2020 60 239 1.1E-32 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS02475 aa9d1e8d34824e50f79a5b354bde79cd 241 PANTHER PTHR11907 3 240 1.0E-67 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 PANTHER PTHR30222 2 363 1.6E-184 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 PANTHER PTHR30222:SF2 2 363 1.6E-184 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 Gene3D G3DSA:3.40.190.10 60 157 3.1E-7 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 Gene3D G3DSA:3.40.190.10 158 303 1.2E-31 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 SUPERFAMILY SSF53850 44 360 2.93E-59 T 26-04-2016 PAM18_RS26085 b63289237b1c6f44abe27962d3fa329b 363 Pfam PF13416 Bacterial extracellular solute-binding protein 63 327 6.0E-41 T 26-04-2016 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 PIRSF PIRSF006755 1 226 1.9E-76 T 26-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 Gene3D G3DSA:3.40.50.300 1 219 2.9E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 SUPERFAMILY SSF52540 1 214 6.02E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 218 29.0 T 26-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 Pfam PF13500 AAA domain 3 211 1.4E-35 T 26-04-2016 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 1.8E-44 T 26-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 PANTHER PTHR21343:SF13 1 224 1.3E-112 T 26-04-2016 PAM18_RS02550 7bbfbc897cd1250ff324e04bf0133c62 228 PANTHER PTHR21343 1 224 1.3E-112 T 26-04-2016 PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 PANTHER PTHR10657:SF15 46 259 1.0E-36 T 26-04-2016 PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 Pfam PF00639 PPIC-type PPIASE domain 122 214 6.1E-21 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 Gene3D G3DSA:3.10.50.40 114 239 3.5E-26 T 26-04-2016 PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 SUPERFAMILY SSF109998 19 142 1.65E-5 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 SUPERFAMILY SSF54534 109 215 1.18E-21 T 26-04-2016 PAM18_RS05435 2b83179929a0568abbf4d65c1627ea38 272 PANTHER PTHR10657 46 259 1.0E-36 T 26-04-2016 PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 PANTHER PTHR17490:SF8 8 180 4.5E-100 T 26-04-2016 PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 Pfam PF01300 Telomere recombination 13 184 1.1E-42 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 SUPERFAMILY SSF55821 7 184 1.46E-52 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 183 38.39 T 26-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 Gene3D G3DSA:3.90.870.10 8 184 4.3E-54 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS00110 5385aa3ffa196a7f316a6852f6814a19 185 PANTHER PTHR17490 8 180 4.5E-100 T 26-04-2016 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 PANTHER PTHR26402:SF506 2 212 1.3E-100 T 26-04-2016 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.5E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.5E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.5E-5 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 PANTHER PTHR26402 2 212 1.3E-100 T 26-04-2016 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 Gene3D G3DSA:1.10.10.10 121 211 3.1E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 SMART SM00448 2 115 6.8E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 SMART SM00421 147 204 4.4E-18 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 Gene3D G3DSA:3.40.50.2300 2 120 1.8E-35 T 26-04-2016 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 SUPERFAMILY SSF46894 132 211 2.07E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 SUPERFAMILY SSF52172 2 132 9.53E-34 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS12360 aa1d3827711d5574adbed81e6d432cc7 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 1.4E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 SUPERFAMILY SSF53474 5 189 3.71E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 Gene3D G3DSA:3.40.50.1820 131 187 1.2E-19 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 Gene3D G3DSA:3.40.50.1820 5 99 1.2E-19 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 PANTHER PTHR35602:SF3 2 195 3.9E-112 T 26-04-2016 PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 190 1.7E-70 T 26-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PAM18_RS25995 d3fecd019bfff7b7bca41dc3acb6c3b3 206 PANTHER PTHR35602 2 195 3.9E-112 T 26-04-2016 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 364 388 - T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 Pfam PF01019 Gamma-glutamyltranspeptidase 45 550 1.7E-174 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 547 1.2E-154 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PANTHER PTHR11686 30 551 1.9E-204 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 SUPERFAMILY SSF56235 26 553 2.7E-171 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PANTHER PTHR11686:SF9 30 551 1.9E-204 T 26-04-2016 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 470 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 444 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS18255 7331fd0ff4ad6400b43cb882d60cd4d2 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 1.3E-72 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00250 b6207c8750a56bfebf0d7e63b9d7dab5 127 PANTHER PTHR10245 1 106 9.8E-12 T 26-04-2016 PAM18_RS00250 b6207c8750a56bfebf0d7e63b9d7dab5 127 Gene3D G3DSA:1.10.260.40 1 70 2.1E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS00250 b6207c8750a56bfebf0d7e63b9d7dab5 127 Pfam PF01381 Helix-turn-helix 9 61 3.0E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS00250 b6207c8750a56bfebf0d7e63b9d7dab5 127 SUPERFAMILY SSF47413 1 65 1.75E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS00250 b6207c8750a56bfebf0d7e63b9d7dab5 127 SMART SM00530 6 61 3.3E-10 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 Gene3D G3DSA:3.50.50.60 5 183 2.6E-44 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 Gene3D G3DSA:3.50.50.60 289 365 2.6E-44 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 SUPERFAMILY SSF54373 185 293 2.43E-31 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PANTHER PTHR13789:SF186 3 372 5.7E-99 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PANTHER PTHR13789 3 372 5.7E-99 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 Pfam PF01494 FAD binding domain 6 176 3.1E-13 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 Pfam PF01494 FAD binding domain 299 362 1.3E-9 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 SUPERFAMILY SSF51905 289 366 9.5E-66 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 SUPERFAMILY SSF51905 5 178 9.5E-66 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.5E-21 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 3.5E-21 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.5E-21 T 26-04-2016 PAM18_RS03685 40fbc921ffeae939eedd26431aab3cf7 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 3.5E-21 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 PANTHER PTHR10909:SF154 390 478 2.3E-266 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 PANTHER PTHR10909:SF154 1 373 2.3E-266 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.5E-11 T 26-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF56645 38 277 7.33E-60 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:2.40.110.10 161 267 1.5E-27 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 2.7E-12 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.20.140.10 268 465 1.1E-46 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 PANTHER PTHR10909 390 478 2.3E-266 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 PANTHER PTHR10909 1 373 2.3E-266 T 26-04-2016 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 5.0E-18 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF47203 287 475 9.83E-48 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 8.0E-20 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 2.5E-35 T 26-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain PAM18_RS02560 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.10.540.10 36 159 1.2E-18 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 PANTHER PTHR11019:SF138 9 247 2.7E-114 T 26-04-2016 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 Pfam PF02311 AraC-like ligand binding domain 12 114 1.0E-9 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 Pfam PF12833 Helix-turn-helix domain 173 248 2.2E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 5.0E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 5.0E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 SUPERFAMILY SSF51182 6 181 4.96E-22 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 244 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 PANTHER PTHR11019 9 247 2.7E-114 T 26-04-2016 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 Gene3D G3DSA:2.60.120.10 7 84 1.1E-12 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 Gene3D G3DSA:1.10.10.60 145 202 3.1E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 SMART SM00342 166 248 4.0E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 SUPERFAMILY SSF46689 203 248 1.66E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19415 71e9eb5b0f4a5fc0faf8de3a10b62164 260 Gene3D G3DSA:1.10.10.60 203 247 1.1E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25540 cc39f179e79e99194ded8a36283a4eb2 689 PANTHER PTHR30441 1 689 7.0E-177 T 26-04-2016 PAM18_RS25540 cc39f179e79e99194ded8a36283a4eb2 689 Pfam PF05170 AsmA family 1 575 2.1E-182 T 26-04-2016 IPR007844 AsmA PAM18_RS25540 cc39f179e79e99194ded8a36283a4eb2 689 PANTHER PTHR30441:SF2 1 689 7.0E-177 T 26-04-2016 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Gene3D G3DSA:3.30.559.10 188 421 3.6E-80 T 26-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Pfam PF00364 Biotin-requiring enzyme 5 76 6.4E-19 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 421 2.6E-78 T 26-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 SUPERFAMILY SSF52777 187 422 3.25E-78 T 26-04-2016 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 SUPERFAMILY SSF51230 3 92 2.09E-25 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 PANTHER PTHR23151 1 423 5.0E-248 T 26-04-2016 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Gene3D G3DSA:4.10.320.10 128 174 2.2E-17 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Pfam PF02817 e3 binding domain 134 168 1.8E-11 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 Gene3D G3DSA:2.40.50.100 3 93 1.6E-24 T 26-04-2016 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 26-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 PANTHER PTHR23151:SF62 1 423 5.0E-248 T 26-04-2016 PAM18_RS14340 08605095efe5570e0b636f32bf8b38fa 423 SUPERFAMILY SSF47005 128 173 3.79E-11 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS04710 a690ae567a36999cb3001342b6b0d79e 120 PANTHER PTHR33931:SF2 1 120 1.5E-42 T 26-04-2016 PAM18_RS04710 a690ae567a36999cb3001342b6b0d79e 120 Pfam PF03788 LrgA family 13 106 1.1E-20 T 26-04-2016 IPR005538 LrgA/CidA family GO:0016021 PAM18_RS04710 a690ae567a36999cb3001342b6b0d79e 120 PANTHER PTHR33931 1 120 1.5E-42 T 26-04-2016 PAM18_RS16010 e19254abe2c9a32976220e9ec8106a7c 115 SUPERFAMILY SSF51182 29 113 8.19E-16 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS16010 e19254abe2c9a32976220e9ec8106a7c 115 Pfam PF05899 Protein of unknown function (DUF861) 41 111 9.2E-27 T 26-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS16010 e19254abe2c9a32976220e9ec8106a7c 115 Gene3D G3DSA:2.60.120.10 31 115 2.4E-26 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS16010 e19254abe2c9a32976220e9ec8106a7c 115 PANTHER PTHR33271 34 113 8.1E-28 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 PANTHER PTHR11014 4 412 1.3E-186 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 PIRSF PIRSF037238 29 410 1.2E-102 T 26-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 Gene3D G3DSA:3.40.630.10 31 212 3.7E-51 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 Gene3D G3DSA:3.40.630.10 321 410 3.7E-51 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 SUPERFAMILY SSF55031 212 323 2.88E-21 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 Pfam PF01546 Peptidase family M20/M25/M40 107 407 2.8E-31 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 Pfam PF07687 Peptidase dimerisation domain 209 309 8.9E-20 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 PANTHER PTHR11014:SF64 4 412 1.3E-186 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 Gene3D G3DSA:3.30.70.360 213 316 3.1E-26 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 SUPERFAMILY SSF53187 332 409 9.43E-50 T 26-04-2016 PAM18_RS11175 3bbe8a1194768db6406fe38237bfe61f 412 SUPERFAMILY SSF53187 31 220 9.43E-50 T 26-04-2016 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 PANTHER PTHR11908 1 134 2.8E-27 T 26-04-2016 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 Gene3D G3DSA:3.10.20.30 2 73 1.4E-26 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 Gene3D G3DSA:1.10.150.120 74 153 3.9E-29 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 SUPERFAMILY SSF47741 83 152 6.28E-29 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 59 5.5E-7 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 Pfam PF01799 [2Fe-2S] binding domain 72 144 5.5E-25 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 PANTHER PTHR11908:SF66 1 134 2.8E-27 T 26-04-2016 PAM18_RS13690 f71e2e452636b9a70316f80f5d18ca3e 156 SUPERFAMILY SSF54292 2 76 1.19E-25 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 Gene3D G3DSA:1.20.59.10 2 90 1.9E-14 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 SUPERFAMILY SSF48600 1 94 5.36E-25 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 PIRSF PIRSF029775 1 101 1.5E-40 T 26-04-2016 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00025 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 SMART SM00830 14 93 4.0E-23 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 10 90 1.6E-39 T 26-04-2016 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00025 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 PANTHER PTHR38041 1 101 9.1E-27 T 26-04-2016 PAM18_RS03620 7bad598d98e2fb987bbd59da9d08a04a 101 Pfam PF01817 Chorismate mutase type II 14 90 3.3E-14 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS10340 45fb9a2d540453c104b5579c92f2cb68 142 SUPERFAMILY SSF159664 4 134 2.22E-35 T 26-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PAM18_RS10340 45fb9a2d540453c104b5579c92f2cb68 142 PANTHER PTHR37477 1 142 1.2E-50 T 26-04-2016 PAM18_RS10340 45fb9a2d540453c104b5579c92f2cb68 142 Pfam PF01890 Cobalamin synthesis G C-terminus 9 133 3.1E-27 T 26-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PAM18_RS10340 45fb9a2d540453c104b5579c92f2cb68 142 PANTHER PTHR37477:SF1 1 142 1.2E-50 T 26-04-2016 PAM18_RS10340 45fb9a2d540453c104b5579c92f2cb68 142 Gene3D G3DSA:3.30.420.180 6 134 4.2E-32 T 26-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 PANTHER PTHR32322:SF8 1 298 2.8E-124 T 26-04-2016 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 PANTHER PTHR32322 1 298 2.8E-124 T 26-04-2016 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 Pfam PF00892 EamA-like transporter family 150 285 1.1E-14 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 Pfam PF00892 EamA-like transporter family 5 134 1.9E-11 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 SUPERFAMILY SSF103481 35 137 3.47E-13 T 26-04-2016 PAM18_RS05295 ac499d51e4590e2b24aee5effaadb9dd 300 SUPERFAMILY SSF103481 184 288 3.92E-11 T 26-04-2016 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Gene3D G3DSA:3.30.465.10 497 569 1.3E-8 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 PANTHER PTHR32507 1 576 6.5E-299 T 26-04-2016 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 SMART SM01091 492 571 1.3E-12 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Pfam PF03471 Transporter associated domain 495 569 1.6E-10 T 26-04-2016 IPR005170 Transporter-associated domain PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 PANTHER PTHR32507:SF7 1 576 6.5E-299 T 26-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.2E-56 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 SUPERFAMILY SSF116726 411 483 3.53E-11 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Gene3D G3DSA:3.30.70.1450 420 483 7.2E-7 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 574 51.571 T 26-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 SUPERFAMILY SSF56176 497 569 3.54E-8 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS26270 909f25304f31d6d4a4b5551c445217d2 580 Pfam PF02080 TrkA-C domain 418 483 2.2E-11 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 Pfam PF01048 Phosphorylase superfamily 276 460 2.0E-16 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 Hamap MF_01932 AMP nucleosidase [amn]. 8 491 60.609 T 26-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 PANTHER PTHR21234 256 491 1.5E-121 T 26-04-2016 IPR018017 Nucleoside phosphorylase PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 PANTHER PTHR21234 186 231 1.5E-121 T 26-04-2016 IPR018017 Nucleoside phosphorylase PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 PANTHER PTHR21234:SF11 256 491 1.5E-121 T 26-04-2016 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 PANTHER PTHR21234:SF11 186 231 1.5E-121 T 26-04-2016 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 17 171 5.9E-50 T 26-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 SUPERFAMILY SSF53167 14 491 1.31E-143 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 Gene3D G3DSA:3.40.50.1580 180 472 7.6E-106 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 Gene3D G3DSA:3.30.1730.10 12 175 1.6E-54 T 26-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PAM18_RS04925 e2fd6cb49cc87b81d835b46a398a70ef 491 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 16 491 2.1E-251 T 26-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Hamap MF_00361 NAD kinase [nadK]. 5 287 34.006 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 PANTHER PTHR20275 2 291 4.8E-107 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Gene3D G3DSA:2.60.200.30 153 261 3.4E-44 T 26-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Pfam PF01513 ATP-NAD kinase 7 271 1.1E-68 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 SUPERFAMILY SSF111331 6 289 9.94E-90 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PAM18_RS09640 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Gene3D G3DSA:3.40.50.10330 3 152 3.8E-39 T 26-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS24720 6b4e98327eb99553c4bbd656ca75c4a4 235 PANTHER PTHR30545:SF2 1 235 6.7E-86 T 26-04-2016 PAM18_RS24720 6b4e98327eb99553c4bbd656ca75c4a4 235 Pfam PF03749 Sugar fermentation stimulation protein 13 226 1.3E-72 T 26-04-2016 IPR005224 Sugar fermentation stimulation protein PAM18_RS24720 6b4e98327eb99553c4bbd656ca75c4a4 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 56.604 T 26-04-2016 IPR005224 Sugar fermentation stimulation protein PAM18_RS24720 6b4e98327eb99553c4bbd656ca75c4a4 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 233 3.6E-64 T 26-04-2016 IPR005224 Sugar fermentation stimulation protein PAM18_RS24720 6b4e98327eb99553c4bbd656ca75c4a4 235 PANTHER PTHR30545 1 235 6.7E-86 T 26-04-2016 PAM18_RS08285 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Pfam PF07317 Flagellar regulator YcgR 31 135 4.2E-25 T 26-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal PAM18_RS08285 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Pfam PF07238 PilZ domain 138 249 1.5E-8 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS08285 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Gene3D G3DSA:2.40.10.220 139 260 3.0E-38 T 26-04-2016 PAM18_RS08285 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Gene3D G3DSA:2.30.110.10 28 138 1.9E-46 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF51905 4 318 3.65E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PANTHER PTHR22912:SF93 4 459 6.1E-273 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 1.2E-62 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.30.390.30 343 456 5.1E-31 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-30 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-30 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.9E-30 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-30 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-30 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-50 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 7.9E-29 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PIRSF PIRSF000350 2 459 5.3E-68 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 73.11 T 26-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.50.50.60 5 143 4.1E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 PANTHER PTHR22912 4 459 6.1E-273 T 26-04-2016 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.50.50.60 144 333 1.0E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10115 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF55424 343 461 5.84E-29 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 PAM18_RS20760 92e4152e19941d64ee100eccd1f537aa 347 SUPERFAMILY SSF74653 229 344 2.26E-25 T 26-04-2016 PAM18_RS20760 92e4152e19941d64ee100eccd1f537aa 347 Pfam PF13103 TonB C terminal 258 322 1.8E-11 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS20760 92e4152e19941d64ee100eccd1f537aa 347 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 266 342 2.4E-14 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS20760 92e4152e19941d64ee100eccd1f537aa 347 Gene3D G3DSA:3.30.1150.10 226 345 6.8E-37 T 26-04-2016 PAM18_RS20760 92e4152e19941d64ee100eccd1f537aa 347 TIGRFAM TIGR02794 tolA_full: protein TolA 15 342 2.2E-61 T 26-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 PAM18_RS02100 8f61a7fd7b01e8730c6b24fb840443bd 168 Pfam PF01584 CheW-like domain 26 158 3.9E-10 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02100 8f61a7fd7b01e8730c6b24fb840443bd 168 SUPERFAMILY SSF50341 20 158 2.88E-9 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02100 8f61a7fd7b01e8730c6b24fb840443bd 168 SMART SM00260 21 159 3.1E-15 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS03875 92b241633193616aec9859ee96c40350 431 PANTHER PTHR34596 2 431 1.9E-171 T 26-04-2016 PAM18_RS03875 92b241633193616aec9859ee96c40350 431 Gene3D G3DSA:2.40.160.10 36 431 1.9E-139 T 26-04-2016 IPR023614 Porin domain PAM18_RS03875 92b241633193616aec9859ee96c40350 431 Pfam PF03573 outer membrane porin, OprD family 32 429 2.5E-142 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 Gene3D G3DSA:1.10.10.10 202 259 4.9E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 202 255 1.0E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 SUPERFAMILY SSF46894 191 259 9.52E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 SMART SM00421 200 257 2.5E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PANTHER PTHR26402 29 157 3.1E-32 T 26-04-2016 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PANTHER PTHR26402 184 262 3.1E-32 T 26-04-2016 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 233 4.9E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 245 4.9E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 217 4.9E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PANTHER PTHR26402:SF572 29 157 3.1E-32 T 26-04-2016 PAM18_RS18665 6681bc2423d10d9ebc4a040936b732fd 268 PANTHER PTHR26402:SF572 184 262 3.1E-32 T 26-04-2016 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 SUPERFAMILY SSF56655 9 268 7.33E-73 T 26-04-2016 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 254 1.8E-85 T 26-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 26-04-2016 IPR020583 Inositol monophosphatase, metal-binding site PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 Gene3D G3DSA:3.40.190.80 155 255 6.3E-39 T 26-04-2016 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 Pfam PF00459 Inositol monophosphatase family 10 244 9.6E-48 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PANTHER PTHR20854:SF5 1 268 4.2E-81 T 26-04-2016 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.6E-10 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.6E-10 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.6E-10 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.6E-10 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 Gene3D G3DSA:3.30.540.10 10 154 9.1E-42 T 26-04-2016 PAM18_RS27060 ba69ccf3d932b5a1456748ead564153d 273 PANTHER PTHR20854 1 268 4.2E-81 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 9.6E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.6E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 309 325 9.6E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 264 291 9.6E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 SMART SM00998 397 476 3.2E-16 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 Pfam PF10397 Adenylosuccinate lyase C-terminus 400 475 8.2E-12 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 Gene3D G3DSA:1.20.200.10 138 474 1.2E-84 T 26-04-2016 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PANTHER PTHR11444:SF26 17 479 0.0 T 26-04-2016 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 ProSitePatterns PS00163 Fumarate lyases signature. 309 318 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.5E-9 T 26-04-2016 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 264 288 1.5E-9 T 26-04-2016 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 309 325 1.5E-9 T 26-04-2016 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 SUPERFAMILY SSF48557 43 480 1.16E-104 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 Pfam PF00206 Lyase 54 328 5.4E-42 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 Gene3D G3DSA:1.10.275.10 38 137 4.1E-29 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS07565 28d33c86214d5ede5d095db1edf01a97 483 PANTHER PTHR11444 17 479 0.0 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28195 2a3f12c524d6363472282d902c22bfee 156 PANTHER PTHR31757 1 156 6.9E-94 T 26-04-2016 PAM18_RS28195 2a3f12c524d6363472282d902c22bfee 156 Pfam PF07080 Protein of unknown function (DUF1348) 5 146 6.1E-75 T 26-04-2016 IPR009783 Protein of unknown function DUF1348 PAM18_RS28195 2a3f12c524d6363472282d902c22bfee 156 Gene3D G3DSA:3.10.450.50 12 154 5.7E-76 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS28195 2a3f12c524d6363472282d902c22bfee 156 SUPERFAMILY SSF54427 4 156 2.12E-80 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS28195 2a3f12c524d6363472282d902c22bfee 156 PANTHER PTHR31757:SF0 1 156 6.9E-94 T 26-04-2016 PAM18_RS24145 45ae755b6635e1b61bd52b64597972b5 147 Pfam PF07366 SnoaL-like polyketide cyclase 15 134 1.6E-13 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS24145 45ae755b6635e1b61bd52b64597972b5 147 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 7 135 8.4E-43 T 26-04-2016 IPR011721 Conserved hypothetical protein CHP02096 PAM18_RS24145 45ae755b6635e1b61bd52b64597972b5 147 Gene3D G3DSA:3.10.450.50 5 138 7.4E-17 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS24145 45ae755b6635e1b61bd52b64597972b5 147 SUPERFAMILY SSF54427 3 141 8.77E-25 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Gene3D G3DSA:1.10.340.30 22 122 4.5E-44 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 5.8E-110 T 26-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 26-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Pfam PF14815 NUDIX domain 237 343 3.5E-21 T 26-04-2016 IPR029119 MutY, C-terminal PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.8E-8 T 26-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 SMART SM00478 39 190 8.4E-50 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 SUPERFAMILY SSF55811 220 345 4.57E-24 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Gene3D G3DSA:1.10.1670.10 123 224 1.7E-37 T 26-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 1.1E-20 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 Gene3D G3DSA:3.90.79.10 232 348 1.5E-20 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 PANTHER PTHR10359 9 347 1.6E-103 T 26-04-2016 PAM18_RS26910 f4669cebab64497f7cd471f448b1953f 355 SUPERFAMILY SSF48150 4 224 9.11E-75 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 PAM18_RS21215 dd14c1ec0e5eca95739c3c84147fd918 427 PANTHER PTHR33362:SF6 1 426 3.2E-252 T 26-04-2016 PAM18_RS21215 dd14c1ec0e5eca95739c3c84147fd918 427 PANTHER PTHR33362 1 426 3.2E-252 T 26-04-2016 PAM18_RS21215 dd14c1ec0e5eca95739c3c84147fd918 427 PIRSF PIRSF006066 1 427 1.6E-155 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS21215 dd14c1ec0e5eca95739c3c84147fd918 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 3.7E-123 T 26-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PAM18_RS21215 dd14c1ec0e5eca95739c3c84147fd918 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 4.5E-148 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 1.2E-101 T 26-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.9E-25 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 PANTHER PTHR26402 1 222 4.8E-100 T 26-04-2016 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:1.10.10.10 124 222 2.3E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00862 145 220 6.0E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF46894 124 221 2.04E-28 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 PANTHER PTHR26402:SF578 1 222 4.8E-100 T 26-04-2016 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:3.40.50.2300 1 121 2.1E-37 T 26-04-2016 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00448 1 111 8.1E-40 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12970 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF52172 1 121 6.12E-38 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938 1 31 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938 134 143 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938 170 322 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938:SF8 1 31 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938:SF8 134 143 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 PANTHER PTHR11938:SF8 170 322 2.6E-136 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:1.10.3650.10 359 434 1.4E-30 T 26-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 SUPERFAMILY SSF54862 1 487 2.62E-177 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 4.6E-30 T 26-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.3E-38 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 5 57 4.7E-11 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 196 235 1.4E-25 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 0.0 T 26-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 174 195 1.2E-11 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 125 126 1.2E-11 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 236 358 2.2E-76 T 26-04-2016 PAM18_RS05420 f071c5a60e211200e2db0065583438d4 513 Gene3D G3DSA:3.30.70.20 436 465 2.2E-76 T 26-04-2016 PAM18_RS21220 e530113ea2d480ac2ac97a106acec421 212 PANTHER PTHR35011 66 205 1.9E-86 T 26-04-2016 PAM18_RS21220 e530113ea2d480ac2ac97a106acec421 212 PANTHER PTHR35011 1 38 1.9E-86 T 26-04-2016 PAM18_RS21220 e530113ea2d480ac2ac97a106acec421 212 PANTHER PTHR35011:SF1 66 205 1.9E-86 T 26-04-2016 PAM18_RS21220 e530113ea2d480ac2ac97a106acec421 212 PANTHER PTHR35011:SF1 1 38 1.9E-86 T 26-04-2016 PAM18_RS21220 e530113ea2d480ac2ac97a106acec421 212 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 3.9E-20 T 26-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 SUPERFAMILY SSF161098 265 520 2.49E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 306 531 4.3E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 PANTHER PTHR30425:SF7 178 536 1.5E-268 T 26-04-2016 PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 PANTHER PTHR30425 178 536 1.5E-268 T 26-04-2016 PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 Gene3D G3DSA:1.10.3720.10 265 534 6.8E-53 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28030 e2d146788731e6b03b6f250a861318c6 538 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 270 530 1.9E-74 T 26-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 Pfam PF00202 Aminotransferase class-III 21 440 3.1E-107 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 PANTHER PTHR11986:SF80 1 442 0.0 T 26-04-2016 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 Gene3D G3DSA:3.40.640.10 66 343 1.1E-84 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 Gene3D G3DSA:3.90.1150.10 345 442 1.7E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 Gene3D G3DSA:3.90.1150.10 8 64 1.7E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 SUPERFAMILY SSF53383 3 441 6.83E-118 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS27760 95dea582272e39b3fbb33057dba6bbad 444 PANTHER PTHR11986 1 442 0.0 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS10895 11c737ae185a64a15d81e26817e44b74 256 PANTHER PTHR30096 1 255 1.4E-104 T 26-04-2016 PAM18_RS10895 11c737ae185a64a15d81e26817e44b74 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 255 5.1E-49 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS10895 11c737ae185a64a15d81e26817e44b74 256 PIRSF PIRSF006157 1 256 7.7E-92 T 26-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 PAM18_RS10895 11c737ae185a64a15d81e26817e44b74 256 Gene3D G3DSA:3.40.830.10 2 256 6.3E-97 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS10895 11c737ae185a64a15d81e26817e44b74 256 SUPERFAMILY SSF53213 1 256 3.4E-93 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:2.150.10.10 2116 2275 5.7E-4 T 26-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:4.10.1080.10 247 248 3.5E-4 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:4.10.1080.10 195 203 3.5E-4 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:4.10.1080.10 280 293 3.5E-4 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:4.10.1080.10 452 462 3.5E-4 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 Gene3D G3DSA:4.10.1080.10 357 378 3.5E-4 T 26-04-2016 IPR028974 TSP type-3 repeat GO:0005509 PAM18_RS16230 c4e1ff4f1c2c12b3d239b29c1a5f24c9 2308 SUPERFAMILY SSF51120 2111 2299 8.24E-11 T 26-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal PAM18_RS03270 d9873da26acb9bcf821edef773bb474a 137 Pfam PF04519 Polymer-forming cytoskeletal 19 116 6.1E-25 T 26-04-2016 IPR007607 Protein of unknown function DUF583 PAM18_RS03270 d9873da26acb9bcf821edef773bb474a 137 PANTHER PTHR35024 1 137 2.7E-42 T 26-04-2016 PAM18_RS08155 a07d0058369d53f73c8a04c4fd4f03fa 209 SUPERFAMILY SSF159709 26 202 6.02E-54 T 26-04-2016 PAM18_RS08155 a07d0058369d53f73c8a04c4fd4f03fa 209 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 18 201 7.0E-58 T 26-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PAM18_RS08155 a07d0058369d53f73c8a04c4fd4f03fa 209 PIRSF PIRSF020680 10 207 3.2E-63 T 26-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PAM18_RS08155 a07d0058369d53f73c8a04c4fd4f03fa 209 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 20 200 1.9E-52 T 26-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 Pfam PF01081 KDPG and KHG aldolase 11 206 4.3E-79 T 26-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 PANTHER PTHR30246 2 220 4.2E-130 T 26-04-2016 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 213 3.8E-86 T 26-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 131 144 - T 26-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 SUPERFAMILY SSF51569 10 213 4.4E-67 T 26-04-2016 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 43 52 - T 26-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 PANTHER PTHR30246:SF0 2 220 4.2E-130 T 26-04-2016 PAM18_RS09180 94f7b5d58ba5c4b15673c7cc51947fd0 220 Gene3D G3DSA:3.20.20.70 6 217 1.8E-73 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 2.7E-13 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 Pfam PF13377 Periplasmic binding protein-like domain 182 343 1.4E-29 T 26-04-2016 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 Gene3D G3DSA:3.40.50.2300 65 188 4.5E-33 T 26-04-2016 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 Gene3D G3DSA:1.10.260.40 14 64 1.8E-20 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 PANTHER PTHR30146 15 343 2.1E-168 T 26-04-2016 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 Gene3D G3DSA:3.40.50.2300 189 324 4.8E-37 T 26-04-2016 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 SUPERFAMILY SSF47413 15 73 5.06E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 PANTHER PTHR30146:SF2 15 343 2.1E-168 T 26-04-2016 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 SMART SM00354 15 85 2.1E-21 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS13990 44128bc565504ce2d9e47edbf6104302 343 SUPERFAMILY SSF53822 72 327 1.16E-52 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 SUPERFAMILY SSF88713 570 787 1.75E-6 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 147 166 1.8E-6 T 26-04-2016 IPR016062 Hypothetical protein TM1410-related PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 90 109 1.8E-6 T 26-04-2016 IPR016062 Hypothetical protein TM1410-related PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 275 287 1.8E-6 T 26-04-2016 IPR016062 Hypothetical protein TM1410-related PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 253 263 1.8E-6 T 26-04-2016 IPR016062 Hypothetical protein TM1410-related PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 SUPERFAMILY SSF51445 52 305 8.84E-36 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PIRSF PIRSF029570 5 948 0.0 T 26-04-2016 IPR016925 Uncharacterised conserved protein UCP029570 PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 Pfam PF03537 Glycoside-hydrolase family GH114 71 292 9.5E-17 T 26-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain PAM18_RS09745 d132dfa5de0e9a39e4cb924702dbd357 948 PANTHER PTHR35882 1 805 1.2E-126 T 26-04-2016 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 PANTHER PTHR30537:SF5 1 309 2.9E-119 T 26-04-2016 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 Gene3D G3DSA:1.10.10.10 10 89 3.2E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 PANTHER PTHR30537 1 309 2.9E-119 T 26-04-2016 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 Pfam PF03466 LysR substrate binding domain 93 298 2.4E-46 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 8.3E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 SUPERFAMILY SSF53850 94 300 4.34E-46 T 26-04-2016 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 SUPERFAMILY SSF46785 12 117 8.17E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 Gene3D G3DSA:3.40.190.10 97 181 4.1E-25 T 26-04-2016 PAM18_RS11780 6888d7bc4d144390b7afb28df86ba1f5 309 Gene3D G3DSA:3.40.190.10 182 265 1.0E-24 T 26-04-2016 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 SUPERFAMILY SSF53474 40 311 9.59E-64 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 8.4E-15 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 8.4E-15 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 257 271 8.4E-15 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 8.4E-15 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PANTHER PTHR10992 40 313 5.6E-81 T 26-04-2016 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Pfam PF00561 alpha/beta hydrolase fold 61 297 9.7E-21 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PANTHER PTHR10992:SF818 40 313 5.6E-81 T 26-04-2016 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Gene3D G3DSA:3.40.50.1820 40 311 1.5E-67 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 255 271 2.2E-5 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 67 85 2.2E-5 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 288 310 2.2E-5 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 131 144 2.2E-5 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS21505 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 145 158 2.2E-5 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 PANTHER PTHR10799:SF774 482 604 6.0E-37 T 26-04-2016 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 PANTHER PTHR10799:SF774 320 398 6.0E-37 T 26-04-2016 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 Pfam PF07696 7TMR-DISM extracellular 2 38 172 1.4E-25 T 26-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 SUPERFAMILY SSF55073 454 609 3.22E-50 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 SMART SM00267 438 610 3.5E-64 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 604 6.7E-49 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 Pfam PF07695 7TM diverse intracellular signalling 184 387 7.1E-38 T 26-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 609 1.4E-48 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 PANTHER PTHR10799 482 604 6.0E-37 T 26-04-2016 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 PANTHER PTHR10799 320 398 6.0E-37 T 26-04-2016 PAM18_RS25790 5720a041696a25ab8636cf1317d046e6 633 Gene3D G3DSA:3.30.70.270 450 613 6.3E-58 T 26-04-2016 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 Gene3D G3DSA:3.30.1540.10 227 311 2.2E-25 T 26-04-2016 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 Pfam PF02515 CoA-transferase family III 10 376 5.1E-111 T 26-04-2016 IPR003673 CoA-transferase family III GO:0003824 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 PANTHER PTHR24023:SF593 46 224 2.3E-22 T 26-04-2016 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 PANTHER PTHR24023:SF593 250 348 2.3E-22 T 26-04-2016 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 Gene3D G3DSA:3.40.50.10540 6 221 7.4E-99 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 Gene3D G3DSA:3.40.50.10540 312 400 7.4E-99 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 SUPERFAMILY SSF89796 8 400 3.14E-124 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 PANTHER PTHR24023 46 224 2.3E-22 T 26-04-2016 PAM18_RS21235 22eec8feaed3187c74d1522980d5fc2a 400 PANTHER PTHR24023 250 348 2.3E-22 T 26-04-2016 PAM18_RS00545 9da076514e60de6fc56a96ebe0bfbe9a 184 PANTHER PTHR21320 9 182 4.7E-47 T 26-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PAM18_RS00545 9da076514e60de6fc56a96ebe0bfbe9a 184 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 171 1.9E-49 T 26-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PAM18_RS00545 9da076514e60de6fc56a96ebe0bfbe9a 184 SUPERFAMILY SSF110111 54 174 1.12E-46 T 26-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PAM18_RS00545 9da076514e60de6fc56a96ebe0bfbe9a 184 Gene3D G3DSA:2.60.370.10 55 177 1.7E-47 T 26-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain PAM18_RS00545 9da076514e60de6fc56a96ebe0bfbe9a 184 PIRSF PIRSF005413 1 182 5.2E-64 T 26-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 SMART SM00882 8 217 9.4E-41 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 Gene3D G3DSA:3.40.810.20 2 244 6.7E-92 T 26-04-2016 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 Pfam PF01144 Coenzyme A transferase 8 217 1.5E-48 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 PANTHER PTHR13707:SF35 1 237 5.9E-118 T 26-04-2016 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 SUPERFAMILY SSF100950 2 245 3.87E-72 T 26-04-2016 PAM18_RS01125 6694f8a07393a2dfb213778d0ad4267e 260 PANTHER PTHR13707 1 237 5.9E-118 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Pfam PF02082 Transcriptional regulator 4 85 3.5E-24 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 SUPERFAMILY SSF46785 5 146 3.37E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 26-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 PANTHER PTHR33221:SF6 4 165 1.7E-80 T 26-04-2016 PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 6.2E-30 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Gene3D G3DSA:1.10.10.10 5 148 9.0E-38 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11720 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 PANTHER PTHR33221 4 165 1.7E-80 T 26-04-2016 PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 300 8.0E-7 T 26-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 PANTHER PTHR22835:SF222 7 301 3.6E-100 T 26-04-2016 PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 SUPERFAMILY SSF52266 71 304 2.51E-10 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 SUPERFAMILY SSF52266 31 43 2.51E-10 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 Gene3D G3DSA:3.40.50.1110 26 305 2.3E-51 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS25750 bc50be6b6d7b21244b2e521f6b5d7843 307 PANTHER PTHR22835 7 301 3.6E-100 T 26-04-2016 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 SUPERFAMILY SSF55961 171 451 1.81E-56 T 26-04-2016 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 Gene3D G3DSA:3.90.380.10 158 450 1.5E-69 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PANTHER PTHR21266:SF30 1 394 1.8E-129 T 26-04-2016 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 26-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PANTHER PTHR21266 1 394 1.8E-129 T 26-04-2016 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 394 1.3E-9 T 26-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 1.4E-22 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 SUPERFAMILY SSF50022 21 165 3.01E-47 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 Gene3D G3DSA:2.102.10.10 51 157 1.7E-36 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 194 216 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 151 177 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 9.4E-33 T 26-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 PAM18_RS13025 25d2804551b2ad0b41e2649afa37f534 464 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 15 452 7.2E-297 T 26-04-2016 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079|UniPathway: UPA01016 PAM18_RS28615 ddc0d6cf061cbe5a7c712c05b0a63178 346 PIRSF PIRSF029727 1 346 1.2E-181 T 26-04-2016 IPR016937 Uncharacterised conserved protein UCP029727 PAM18_RS28615 ddc0d6cf061cbe5a7c712c05b0a63178 346 Pfam PF11141 Protein of unknown function (DUF2914) 279 344 2.5E-24 T 26-04-2016 IPR022606 Protein of unknown function DUF2914 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 PANTHER PTHR26402 54 258 2.8E-53 T 26-04-2016 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 SMART SM00421 199 256 2.7E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 SUPERFAMILY SSF46894 189 257 2.01E-19 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 2.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 2.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 2.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 PANTHER PTHR26402:SF572 54 258 2.8E-53 T 26-04-2016 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 253 8.6E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS12335 9e420925a057c6cd914c13a380a44a76 268 Gene3D G3DSA:1.10.10.10 200 257 8.0E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF46565 6 77 6.02E-17 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 PANTHER PTHR14021:SF15 6 173 7.6E-50 T 26-04-2016 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.20.1280.20 86 173 1.3E-25 T 26-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 164 7.0E-16 T 26-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 PANTHER PTHR14021 6 173 7.6E-50 T 26-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 17 171 6.9E-30 T 26-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 SMART SM00271 4 69 1.1E-7 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.10.287.110 6 75 1.9E-21 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 172 22.047 T 26-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF47144 84 173 3.92E-23 T 26-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 PAM18_RS05720 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF00226 DnaJ domain 19 73 5.3E-7 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 SUPERFAMILY SSF46785 16 83 2.38E-9 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 Pfam PF07729 FCD domain 89 210 7.3E-17 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 71 2.6E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 Gene3D G3DSA:1.10.10.10 17 80 2.2E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 SMART SM00895 89 212 5.5E-16 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 Gene3D G3DSA:1.20.120.530 82 217 3.5E-26 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS00615 112e05e5c76ec004afc939c5f044f09b 244 SUPERFAMILY SSF48008 87 217 1.7E-21 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS23250 470b791a202dc896224abba07a009687 175 Pfam PF03968 OstA-like protein 35 145 3.6E-26 T 26-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal PAM18_RS23250 470b791a202dc896224abba07a009687 175 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 171 1.9E-46 T 26-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PAM18_RS23250 470b791a202dc896224abba07a009687 175 PANTHER PTHR36504 1 175 1.0E-50 T 26-04-2016 PAM18_RS23250 470b791a202dc896224abba07a009687 175 Gene3D G3DSA:2.60.450.10 25 160 1.5E-33 T 26-04-2016 PAM18_RS23250 470b791a202dc896224abba07a009687 175 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 171 23.831 T 26-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 PAM18_RS17175 3cdd405d4aeeab7d97c73e73e71e4078 158 Pfam PF07321 Type III secretion protein YscO 3 151 7.8E-46 T 26-04-2016 IPR009929 Type III secretion sytem,YscO PAM18_RS16400 ff0527da9ee724df5b95d8a66bce047d 165 PANTHER PTHR31423 1 163 8.0E-103 T 26-04-2016 PAM18_RS16400 ff0527da9ee724df5b95d8a66bce047d 165 SUPERFAMILY SSF55826 5 163 4.84E-40 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS16400 ff0527da9ee724df5b95d8a66bce047d 165 PANTHER PTHR31423:SF4 1 163 8.0E-103 T 26-04-2016 PAM18_RS16400 ff0527da9ee724df5b95d8a66bce047d 165 Gene3D G3DSA:3.90.960.10 3 163 1.1E-52 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS16400 ff0527da9ee724df5b95d8a66bce047d 165 Pfam PF04073 Aminoacyl-tRNA editing domain 26 152 4.7E-26 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS22420 797a9f724f59b1bf481c5fa5194762ab 557 Pfam PF09977 Putative Tad-like Flp pilus-assembly 55 157 2.6E-8 T 26-04-2016 IPR018705 Domain of unknown function DUF2134, membrane PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 Gene3D G3DSA:3.40.50.2300 3 109 3.7E-29 T 26-04-2016 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 Pfam PF01339 CheB methylesterase 187 363 2.7E-57 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 SUPERFAMILY SSF52172 3 109 3.27E-28 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 39.46 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 Gene3D G3DSA:3.40.50.180 180 368 7.1E-73 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 PIRSF PIRSF000876 1 368 1.1E-130 T 26-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 Pfam PF00072 Response regulator receiver domain 5 109 6.6E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 SMART SM00448 3 122 2.2E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS18790 a669f3eacd8fb10c02df40ac4fb15b2a 368 SUPERFAMILY SSF52738 182 367 3.79E-64 T 26-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Pfam PF00005 ABC transporter 20 161 3.8E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Pfam PF08402 TOBE domain 281 355 9.1E-11 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Gene3D G3DSA:2.40.50.100 239 285 1.6E-16 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Gene3D G3DSA:2.40.50.100 349 362 1.6E-16 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Gene3D G3DSA:3.40.50.300 4 234 2.1E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 SUPERFAMILY SSF52540 4 240 4.62E-84 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 SUPERFAMILY SSF50331 236 362 1.72E-27 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 PANTHER PTHR24220:SF319 322 356 1.8E-196 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 PANTHER PTHR24220:SF319 5 240 1.8E-196 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 SMART SM00382 28 211 1.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 PANTHER PTHR24220 322 356 1.8E-196 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 PANTHER PTHR24220 5 240 1.8E-196 T 26-04-2016 PAM18_RS13885 d187ef121aa1a725bfe3df14a4a7592f 370 Gene3D G3DSA:2.40.50.140 286 348 6.5E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 Gene3D G3DSA:3.10.580.10 1 119 1.2E-29 T 26-04-2016 PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 Pfam PF00571 CBS domain 67 118 1.6E-6 T 26-04-2016 IPR000644 CBS domain PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 Pfam PF00571 CBS domain 3 53 2.6E-12 T 26-04-2016 IPR000644 CBS domain PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 PANTHER PTHR11911 1 118 1.5E-23 T 26-04-2016 PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 SMART SM00116 74 122 3.7E-4 T 26-04-2016 IPR000644 CBS domain PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 SMART SM00116 10 57 4.1E-8 T 26-04-2016 IPR000644 CBS domain PAM18_RS14605 5b658feb8204efed23c8c8bddbb5b6e7 137 SUPERFAMILY SSF54631 1 119 9.1E-31 T 26-04-2016 PAM18_RS03940 913304ad1be19c29be68fdd200775fda 152 PANTHER PTHR10545 2 151 5.2E-69 T 26-04-2016 PAM18_RS03940 913304ad1be19c29be68fdd200775fda 152 SUPERFAMILY SSF55729 9 137 7.81E-32 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS03940 913304ad1be19c29be68fdd200775fda 152 Pfam PF00583 Acetyltransferase (GNAT) family 68 137 2.5E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS03940 913304ad1be19c29be68fdd200775fda 152 PANTHER PTHR10545:SF39 2 151 5.2E-69 T 26-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 PAM18_RS03940 913304ad1be19c29be68fdd200775fda 152 Gene3D G3DSA:3.40.630.30 7 150 1.3E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF64397 4 234 7.72E-70 T 26-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.90.1280.10 227 286 2.8E-23 T 26-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 Pfam PF01430 Hsp33 protein 5 276 6.8E-83 T 26-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.55.30.10 2 173 3.6E-61 T 26-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 PIRSF PIRSF005261 1 287 4.3E-77 T 26-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 287 32.132 T 26-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 PANTHER PTHR30111 1 291 2.5E-72 T 26-04-2016 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 PANTHER PTHR30111:SF1 1 291 2.5E-72 T 26-04-2016 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF118352 226 285 2.09E-18 T 26-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 PAM18_RS27155 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:1.10.287.480 181 226 1.1E-19 T 26-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain PAM18_RS13765 d2d6d094b126aaecc3ea215749e2db76 181 PIRSF PIRSF028301 1 175 5.0E-65 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS13765 d2d6d094b126aaecc3ea215749e2db76 181 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 4.7E-54 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS13765 d2d6d094b126aaecc3ea215749e2db76 181 PANTHER PTHR35850:SF1 1 175 5.6E-95 T 26-04-2016 PAM18_RS13765 d2d6d094b126aaecc3ea215749e2db76 181 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 163 1.4E-58 T 26-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PAM18_RS13765 d2d6d094b126aaecc3ea215749e2db76 181 PANTHER PTHR35850 1 175 5.6E-95 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 SUPERFAMILY SSF51126 63 336 1.38E-43 T 26-04-2016 IPR011050 Pectin lyase fold/virulence factor PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338:SF6 465 1633 0.0 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338:SF6 309 446 0.0 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338:SF6 1 282 0.0 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 Pfam PF05860 haemagglutination activity domain 42 152 1.8E-22 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 74 149 5.3E-19 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 SMART SM00912 40 152 1.2E-35 T 26-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338 465 1633 0.0 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338 309 446 0.0 T 26-04-2016 PAM18_RS24120 18774e71acb8dd5653b7ef2d250b3690 1752 PANTHER PTHR12338 1 282 0.0 T 26-04-2016 PAM18_RS10775 3fe869f054f67a13fbb5438028739590 311 Pfam PF00561 alpha/beta hydrolase fold 35 280 2.4E-25 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10775 3fe869f054f67a13fbb5438028739590 311 PANTHER PTHR11440 28 144 2.9E-20 T 26-04-2016 PAM18_RS10775 3fe869f054f67a13fbb5438028739590 311 SUPERFAMILY SSF53474 29 307 2.7E-54 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10775 3fe869f054f67a13fbb5438028739590 311 Gene3D G3DSA:3.40.50.1820 27 309 1.3E-56 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 493 1.3E-155 T 26-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 261 423 1.0E-18 T 26-04-2016 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 472 496 1.0E-18 T 26-04-2016 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 PANTHER PTHR23501:SF52 3 501 5.7E-278 T 26-04-2016 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 8 199 3.01E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 471 496 3.01E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 251 422 3.01E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 PANTHER PTHR23501 3 501 5.7E-278 T 26-04-2016 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 16 193 1.7E-30 T 26-04-2016 PAM18_RS26980 16a071c4edc24c44346f2669ba432b27 509 Pfam PF07690 Major Facilitator Superfamily 19 413 4.8E-52 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Pfam PF08281 Sigma-70, region 4 109 160 2.9E-7 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 SUPERFAMILY SSF88659 99 162 5.98E-10 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 PANTHER PTHR30173 2 378 7.2E-219 T 26-04-2016 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 163 7.1E-13 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Pfam PF04542 Sigma-70 region 2 8 75 6.1E-10 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 SUPERFAMILY SSF88946 5 90 1.37E-12 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Gene3D G3DSA:1.10.1740.10 5 97 7.9E-12 T 26-04-2016 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Gene3D G3DSA:1.25.40.10 357 395 1.7E-4 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Gene3D G3DSA:1.25.40.10 225 255 1.7E-4 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 PANTHER PTHR30173:SF7 2 378 7.2E-219 T 26-04-2016 PAM18_RS18190 59293cbd3befcda6fb72eb420247fad2 407 Gene3D G3DSA:1.10.10.10 101 163 5.2E-12 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00475 54e697c2550471b9854c335bedfdf642 430 Pfam PF05488 PAAR motif 80 151 1.7E-12 T 26-04-2016 IPR008727 PAAR motif PAM18_RS00475 54e697c2550471b9854c335bedfdf642 430 Pfam PF15538 Bacterial toxin 46 266 422 2.9E-97 T 26-04-2016 IPR028238 Bacterial toxin 46 PAM18_RS13245 c898f96fbb932aef7a4d06271ecae17d 332 Pfam PF16220 Domain of unknown function (DUF4880) 18 60 8.4E-14 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS13245 c898f96fbb932aef7a4d06271ecae17d 332 PANTHER PTHR30273 10 330 6.3E-147 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS13245 c898f96fbb932aef7a4d06271ecae17d 332 Pfam PF04773 FecR protein 121 217 3.2E-18 T 26-04-2016 IPR006860 FecR protein PAM18_RS13245 c898f96fbb932aef7a4d06271ecae17d 332 PANTHER PTHR30273:SF3 10 330 6.3E-147 T 26-04-2016 PAM18_RS13245 c898f96fbb932aef7a4d06271ecae17d 332 PIRSF PIRSF018266 8 332 3.9E-93 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 SUPERFAMILY SSF53850 91 301 8.38E-30 T 26-04-2016 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 Gene3D G3DSA:3.40.190.10 89 183 7.3E-18 T 26-04-2016 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 SUPERFAMILY SSF46785 2 112 3.13E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 Gene3D G3DSA:1.10.10.10 3 87 3.8E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 PANTHER PTHR30126:SF32 1 301 4.9E-166 T 26-04-2016 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 PANTHER PTHR30126 1 301 4.9E-166 T 26-04-2016 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 Gene3D G3DSA:3.40.190.10 184 259 4.2E-7 T 26-04-2016 PAM18_RS21950 da8b8f154c9a14f03f817787f6acd35d 304 Pfam PF03466 LysR substrate binding domain 89 297 1.1E-32 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 Gene3D G3DSA:3.30.1330.60 147 258 2.5E-38 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PANTHER PTHR30128 142 268 1.2E-44 T 26-04-2016 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 203 219 6.3E-12 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 158 180 6.3E-12 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 188 203 6.3E-12 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 220 1.1E-5 T 26-04-2016 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 221 240 1.1E-5 T 26-04-2016 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 241 261 1.1E-5 T 26-04-2016 PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 SUPERFAMILY SSF103088 149 258 4.32E-36 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF00691 OmpA family 157 252 5.2E-23 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS10580 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF14346 Domain of unknown function (DUF4398) 15 115 5.0E-20 T 26-04-2016 IPR025511 Domain of unknown function DUF4398 PAM18_RS05770 b226f0f686dc96dcc0caf2039a39a4e8 214 SUPERFAMILY SSF48452 99 196 8.79E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05770 b226f0f686dc96dcc0caf2039a39a4e8 214 Pfam PF09976 Tetratricopeptide repeat-like domain 14 210 1.2E-61 T 26-04-2016 IPR018704 Tetratricopeptide repeat-like domain PAM18_RS05770 b226f0f686dc96dcc0caf2039a39a4e8 214 Gene3D G3DSA:1.25.40.10 101 195 4.3E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05770 b226f0f686dc96dcc0caf2039a39a4e8 214 PANTHER PTHR38035 2 211 4.8E-92 T 26-04-2016 PAM18_RS05770 b226f0f686dc96dcc0caf2039a39a4e8 214 PIRSF PIRSF006170 2 214 8.1E-69 T 26-04-2016 IPR026039 Uncharacterised protein family UPF0070 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 PANTHER PTHR30203:SF3 1 498 2.4E-108 T 26-04-2016 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 Pfam PF02321 Outer membrane efflux protein 80 285 5.5E-24 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 Pfam PF02321 Outer membrane efflux protein 319 497 2.2E-21 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 PANTHER PTHR30203 1 498 2.4E-108 T 26-04-2016 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 498 5.2E-97 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 Gene3D G3DSA:1.20.1600.10 70 498 2.1E-100 T 26-04-2016 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 SUPERFAMILY SSF56954 71 498 4.45E-100 T 26-04-2016 PAM18_RS12315 5fedb3d500a4a203c7176cb81555e82f 498 SUPERFAMILY SSF56954 15 43 4.45E-100 T 26-04-2016 PAM18_RS01680 94d1a3f574dc2749f964d5b4b543279d 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 154 1.1E-59 T 26-04-2016 IPR018729 Protein of unknown function DUF2269, transmembrane PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 PANTHER PTHR22769:SF5 3 124 1.4E-58 T 26-04-2016 PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 SUPERFAMILY SSF55811 9 132 9.21E-21 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 Gene3D G3DSA:3.90.79.10 9 123 5.8E-19 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 PANTHER PTHR22769 3 124 1.4E-58 T 26-04-2016 PAM18_RS07690 fe7302cb7a818e1f5d3d617edb389d34 152 Pfam PF00293 NUDIX domain 10 119 1.7E-12 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 26-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 433 1.4E-196 T 26-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 234 1.3E-51 T 26-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 SMART SM00928 346 391 2.8E-21 T 26-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 3.2E-24 T 26-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 359 370 - T 26-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF140490 343 436 1.23E-29 T 26-04-2016 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 PANTHER PTHR11780 20 433 5.7E-213 T 26-04-2016 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF142984 258 341 8.89E-19 T 26-04-2016 PAM18_RS11990 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF142019 26 253 4.84E-86 T 26-04-2016 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 184 212 - T 26-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 379 4.1E-109 T 26-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 SUPERFAMILY SSF56796 5 390 4.19E-104 T 26-04-2016 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 PANTHER PTHR11496:SF75 1 393 9.0E-204 T 26-04-2016 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 PANTHER PTHR11496 1 393 9.0E-204 T 26-04-2016 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 Gene3D G3DSA:3.40.50.1970 7 195 4.5E-44 T 26-04-2016 PAM18_RS19850 181d09fd2e44cc51cb6682e6b941bcf2 393 Gene3D G3DSA:1.20.1090.10 196 388 1.1E-51 T 26-04-2016 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 PANTHER PTHR10916 1 63 6.7E-28 T 26-04-2016 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.3E-21 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 Gene3D G3DSA:1.10.287.310 1 60 3.7E-27 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 Pfam PF00831 Ribosomal L29 protein 4 59 2.5E-23 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.891 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 SUPERFAMILY SSF46561 1 61 1.44E-21 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03465 3cab79791998fd7a72b4a131eb8f6227 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 26-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 Pfam PF17152 Periplasmic sensor domain 45 145 5.5E-34 T 26-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 405 7.8E-47 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 PANTHER PTHR10799:SF774 214 408 1.8E-55 T 26-04-2016 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 SMART SM00304 183 236 9.6E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 408 1.1E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 SUPERFAMILY SSF55073 254 408 1.02E-44 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 Pfam PF00672 HAMP domain 164 232 1.1E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 SMART SM00267 238 411 2.0E-56 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 PANTHER PTHR10799 214 408 1.8E-55 T 26-04-2016 PAM18_RS19980 ea6b28db2708915219563f8ba5799f4b 435 Gene3D G3DSA:3.30.70.270 250 410 2.1E-54 T 26-04-2016 PAM18_RS14420 1ff14e327832b41c63166ea709279c98 303 SUPERFAMILY SSF53448 4 219 1.88E-36 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS14420 1ff14e327832b41c63166ea709279c98 303 Gene3D G3DSA:3.90.550.10 4 232 1.0E-26 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS14420 1ff14e327832b41c63166ea709279c98 303 PANTHER PTHR22916 1 302 1.6E-139 T 26-04-2016 PAM18_RS14420 1ff14e327832b41c63166ea709279c98 303 PANTHER PTHR22916:SF22 1 302 1.6E-139 T 26-04-2016 PAM18_RS14420 1ff14e327832b41c63166ea709279c98 303 Pfam PF13641 Glycosyltransferase like family 2 2 210 3.0E-14 T 26-04-2016 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00072 Response regulator receiver domain 11 125 2.4E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 Gene3D G3DSA:1.10.10.10 153 204 2.9E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00421 146 203 1.3E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 PANTHER PTHR26402 8 206 8.1E-31 T 26-04-2016 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF46894 141 204 3.74E-15 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00448 8 125 2.3E-5 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 3.4E-14 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF52172 10 137 3.95E-13 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 Gene3D G3DSA:3.40.50.2300 11 152 1.3E-14 T 26-04-2016 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.5E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.5E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10585 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.5E-7 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 PIRSF PIRSF005962 3 389 9.3E-126 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 PANTHER PTHR11014:SF63 10 388 8.3E-153 T 26-04-2016 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 PANTHER PTHR11014 10 388 8.3E-153 T 26-04-2016 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 376 9.7E-108 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 SUPERFAMILY SSF55031 186 293 3.53E-29 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 Pfam PF01546 Peptidase family M20/M25/M40 75 385 6.6E-35 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 Pfam PF07687 Peptidase dimerisation domain 187 280 2.4E-8 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 SUPERFAMILY SSF53187 6 199 4.4E-90 T 26-04-2016 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 SUPERFAMILY SSF53187 300 388 4.4E-90 T 26-04-2016 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 Gene3D G3DSA:3.30.70.360 183 299 1.2E-37 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 Gene3D G3DSA:3.40.630.10 5 180 1.3E-102 T 26-04-2016 PAM18_RS10470 1ff473ffba05651418d92b7a67091077 389 Gene3D G3DSA:3.40.630.10 300 388 1.3E-102 T 26-04-2016 PAM18_RS24020 32d330268378b897713161652821c056 688 PANTHER PTHR30252 9 688 0.0 T 26-04-2016 PAM18_RS24020 32d330268378b897713161652821c056 688 PANTHER PTHR30252:SF3 9 688 0.0 T 26-04-2016 PAM18_RS24020 32d330268378b897713161652821c056 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 1.4E-35 T 26-04-2016 IPR025299 CstA, C-terminal domain PAM18_RS24020 32d330268378b897713161652821c056 688 Pfam PF02554 Carbon starvation protein CstA 35 411 9.3E-169 T 26-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 113 2.2E-25 T 26-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 279 8.3E-95 T 26-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 SUPERFAMILY SSF51690 116 280 1.77E-60 T 26-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 Gene3D G3DSA:3.20.20.70 136 269 2.1E-61 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 SUPERFAMILY SSF54675 12 114 7.06E-32 T 26-04-2016 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 279 1.3E-56 T 26-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 Gene3D G3DSA:3.90.1170.20 10 135 7.0E-50 T 26-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 PIRSF PIRSF006250 7 282 9.6E-110 T 26-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PAM18_RS23570 66ebe48c40fe004bc6896e592b2da911 282 PANTHER PTHR32179 1 280 8.8E-127 T 26-04-2016 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 SMART SM00304 390 450 18.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 SMART SM00304 301 355 7.7E-16 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 Pfam PF02743 Cache domain 37 263 4.2E-35 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 PANTHER PTHR32089:SF39 11 632 0.0 T 26-04-2016 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 SUPERFAMILY SSF58104 323 632 3.27E-76 T 26-04-2016 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 416 630 3.8E-47 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 SUPERFAMILY SSF103190 93 184 8.89E-9 T 26-04-2016 IPR029151 Periplasmic sensor domain-like PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 Gene3D G3DSA:3.30.450.20 143 278 3.5E-27 T 26-04-2016 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 Pfam PF00672 HAMP domain 282 351 3.2E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 Gene3D G3DSA:1.10.287.950 384 601 7.6E-57 T 26-04-2016 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 SMART SM00283 370 631 2.1E-96 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22470 10ebd0fcad4a8a2b6ac8335fcc2c1009 632 PANTHER PTHR32089 11 632 0.0 T 26-04-2016 PAM18_RS28225 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 Gene3D G3DSA:3.40.50.620 25 255 1.8E-26 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS28225 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 SUPERFAMILY SSF52402 24 217 1.19E-25 T 26-04-2016 PAM18_RS28225 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 SMART SM00893 12 190 1.0E-5 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS28225 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 Pfam PF01012 Electron transfer flavoprotein domain 27 185 1.3E-17 T 26-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 PAM18_RS28225 fb0bbd4c8eb2ce9ad98d1164fc4a8421 257 PANTHER PTHR21294 27 167 5.3E-26 T 26-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 PANTHER PTHR24220 3 240 6.5E-132 T 26-04-2016 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 Gene3D G3DSA:3.40.50.300 1 237 6.0E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 SMART SM00382 26 213 1.0E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 PANTHER PTHR24220:SF327 3 240 6.5E-132 T 26-04-2016 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 Pfam PF00005 ABC transporter 18 165 7.6E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 PIRSF PIRSF039085 1 240 1.2E-103 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS19305 125b4d700210f9f843635753706d1b4e 240 SUPERFAMILY SSF52540 1 234 6.21E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 122 1.2E-17 T 26-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 26-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 SUPERFAMILY SSF50475 13 214 2.16E-52 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 26 214 6.3E-45 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Gene3D G3DSA:2.30.110.10 21 214 1.6E-58 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 179 214 1.2E-9 T 26-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 PIRSF PIRSF000190 2 214 8.5E-61 T 26-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS16075 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 PANTHER PTHR10851 1 214 1.2E-74 T 26-04-2016 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 Pfam PF03466 LysR substrate binding domain 92 292 1.1E-40 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 PANTHER PTHR30537:SF15 1 297 3.4E-179 T 26-04-2016 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 SUPERFAMILY SSF46785 4 81 6.56E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 PANTHER PTHR30537 1 297 3.4E-179 T 26-04-2016 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 SUPERFAMILY SSF53850 94 295 3.8E-39 T 26-04-2016 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.1E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:1.10.10.10 2 82 3.1E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.9E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:3.40.190.10 178 260 4.5E-36 T 26-04-2016 PAM18_RS02260 47bf9a947eae5e36e9634e18c9de28ff 302 Gene3D G3DSA:3.40.190.10 95 177 1.7E-29 T 26-04-2016 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PIRSF PIRSF000166 2 302 5.1E-128 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 56.337 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 30 46 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 89 113 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 261 287 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 47 68 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 161 190 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 233 260 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 124 146 5.1E-88 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 26-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 1.4E-132 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 PANTHER PTHR10755 3 302 1.8E-190 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 SUPERFAMILY SSF102886 4 301 1.1E-139 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS00120 d226d3587c5bbc473501a64bcbf10269 305 Gene3D G3DSA:3.40.1500.10 5 301 3.6E-136 T 26-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 PANTHER PTHR30544 1 331 1.1E-107 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 Gene3D G3DSA:3.20.20.70 100 315 8.4E-12 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 PANTHER PTHR30544:SF5 1 331 1.1E-107 T 26-04-2016 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 Pfam PF04055 Radical SAM superfamily 102 261 9.4E-11 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 PIRSF PIRSF006004 1 345 9.5E-97 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS16410 1bdfe1d43e6588f2d110d15c43125552 346 SUPERFAMILY SSF102114 100 303 4.58E-12 T 26-04-2016 PAM18_RS16720 6b6387173952bd44bfd0c66355225e67 402 Gene3D G3DSA:3.40.190.10 145 244 2.7E-7 T 26-04-2016 PAM18_RS16720 6b6387173952bd44bfd0c66355225e67 402 PANTHER PTHR30024:SF7 1 392 3.9E-189 T 26-04-2016 PAM18_RS16720 6b6387173952bd44bfd0c66355225e67 402 SUPERFAMILY SSF53850 22 257 1.42E-25 T 26-04-2016 PAM18_RS16720 6b6387173952bd44bfd0c66355225e67 402 Pfam PF13379 NMT1-like family 16 267 2.6E-90 T 26-04-2016 PAM18_RS16720 6b6387173952bd44bfd0c66355225e67 402 PANTHER PTHR30024 1 392 3.9E-189 T 26-04-2016 PAM18_RS27320 ef675eef0df125669f771524fb3fa6d6 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 69 1.4E-32 T 26-04-2016 IPR012662 Conserved hypothetical protein CHP02449 PAM18_RS27320 ef675eef0df125669f771524fb3fa6d6 69 Gene3D G3DSA:1.20.5.10 10 32 3.4E-4 T 26-04-2016 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 SUPERFAMILY SSF52317 6 208 2.64E-45 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 SMART SM00342 244 327 5.7E-29 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 Pfam PF12833 Helix-turn-helix domain 250 329 3.9E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 Gene3D G3DSA:3.40.50.880 7 232 4.7E-55 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 Gene3D G3DSA:1.10.10.60 233 280 4.4E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 PANTHER PTHR11019:SF58 78 330 4.8E-95 T 26-04-2016 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 Pfam PF01965 DJ-1/PfpI family 7 188 4.0E-21 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 Gene3D G3DSA:1.10.10.60 281 328 1.3E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 SUPERFAMILY SSF46689 280 330 3.94E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 PANTHER PTHR11019 78 330 4.8E-95 T 26-04-2016 PAM18_RS16355 1f15dc9014f1d143650304b5b5a6c895 334 SUPERFAMILY SSF46689 228 277 1.36E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03215 4edaac4f027dfded1d5b16dcaf0d68d1 140 SUPERFAMILY SSF82784 1 137 1.83E-41 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS03215 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:2.20.25.10 1 34 3.6E-17 T 26-04-2016 PAM18_RS03215 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:3.30.300.20 39 137 1.2E-42 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS03215 4edaac4f027dfded1d5b16dcaf0d68d1 140 Pfam PF02566 OsmC-like protein 34 132 2.7E-19 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS03215 4edaac4f027dfded1d5b16dcaf0d68d1 140 PANTHER PTHR34352 1 140 1.1E-52 T 26-04-2016 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 Gene3D G3DSA:3.40.140.10 2 132 2.9E-44 T 26-04-2016 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 Pfam PF14437 MafB19-like deaminase 2 111 1.7E-21 T 26-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 SUPERFAMILY SSF53927 2 127 2.85E-40 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 PANTHER PTHR11079 127 138 5.2E-28 T 26-04-2016 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 PANTHER PTHR11079 3 110 5.2E-28 T 26-04-2016 PAM18_RS13090 be8557dbe94e09cbf7e1a671bbeeb431 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PAM18_RS23310 e21e40ab0a14b6908f92076920fb4d75 449 SUPERFAMILY SSF111283 15 449 6.15E-128 T 26-04-2016 PAM18_RS23310 e21e40ab0a14b6908f92076920fb4d75 449 PANTHER PTHR30624:SF1 8 449 4.3E-189 T 26-04-2016 PAM18_RS23310 e21e40ab0a14b6908f92076920fb4d75 449 PANTHER PTHR30624 8 449 4.3E-189 T 26-04-2016 PAM18_RS23310 e21e40ab0a14b6908f92076920fb4d75 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 1.4E-54 T 26-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS06600 baa13a0f23ecbed0395fefe145f1a22a 201 Gene3D G3DSA:3.30.420.10 13 153 7.2E-51 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS06600 baa13a0f23ecbed0395fefe145f1a22a 201 PANTHER PTHR10954 11 197 8.7E-86 T 26-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 PAM18_RS06600 baa13a0f23ecbed0395fefe145f1a22a 201 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 192 39.404 T 26-04-2016 IPR022898 Ribonuclease HII GO:0004523 PAM18_RS06600 baa13a0f23ecbed0395fefe145f1a22a 201 SUPERFAMILY SSF53098 13 197 1.27E-71 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS06600 baa13a0f23ecbed0395fefe145f1a22a 201 Pfam PF01351 Ribonuclease HII 15 191 1.9E-42 T 26-04-2016 IPR024567 Ribonuclease HII/HIII domain PAM18_RS10165 d0585b42beea8db0c7c5b16edf4b406b 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 138 1.5E-26 T 26-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PAM18_RS10165 d0585b42beea8db0c7c5b16edf4b406b 146 PANTHER PTHR30558 1 141 1.6E-84 T 26-04-2016 PAM18_RS10165 d0585b42beea8db0c7c5b16edf4b406b 146 PANTHER PTHR30558:SF5 1 141 1.6E-84 T 26-04-2016 PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 Gene3D G3DSA:3.40.50.920 206 326 1.6E-42 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 SUPERFAMILY SSF52518 11 195 5.89E-62 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 Pfam PF02780 Transketolase, C-terminal domain 205 322 3.5E-35 T 26-04-2016 IPR033248 Transketolase, C-terminal domain PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 Pfam PF02779 Transketolase, pyrimidine binding domain 12 186 4.4E-48 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 SMART SM00861 11 186 7.6E-60 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 Gene3D G3DSA:3.40.50.970 9 201 1.2E-72 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 SUPERFAMILY SSF52922 197 331 2.22E-37 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 PANTHER PTHR11624:SF21 1 332 6.0E-135 T 26-04-2016 PAM18_RS07960 969dbc0d205380cccb93359b6a8e8ad0 333 PANTHER PTHR11624 1 332 6.0E-135 T 26-04-2016 IPR033247 Transketolase family PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 7.4E-80 T 26-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 PIRSF PIRSF001492 1 514 2.6E-204 T 26-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Pfam PF01676 Metalloenzyme superfamily 6 501 1.9E-79 T 26-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Gene3D G3DSA:3.40.720.10 6 79 5.3E-87 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Gene3D G3DSA:3.40.720.10 316 512 5.3E-87 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 PANTHER PTHR31637 1 515 1.8E-288 T 26-04-2016 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 51.313 T 26-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 SUPERFAMILY SSF64158 79 311 1.7E-83 T 26-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 Gene3D G3DSA:3.40.1450.10 80 312 8.1E-95 T 26-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 PANTHER PTHR31637:SF0 1 515 1.8E-288 T 26-04-2016 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 3.3E-245 T 26-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 SUPERFAMILY SSF53649 5 79 2.36E-77 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS26815 e3ea57d3d695db92196407a6b8b17922 515 SUPERFAMILY SSF53649 312 512 2.36E-77 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS03720 1910c5adf2103a19d7389ffe7dd2f941 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 17 162 2.0E-83 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS03720 1910c5adf2103a19d7389ffe7dd2f941 162 Pfam PF03284 Phenazine biosynthesis protein A/B 14 162 1.5E-85 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS03720 1910c5adf2103a19d7389ffe7dd2f941 162 SUPERFAMILY SSF54427 20 149 6.18E-25 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS03720 1910c5adf2103a19d7389ffe7dd2f941 162 Gene3D G3DSA:3.10.450.50 2 160 3.0E-50 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 PANTHER PTHR30041 1 116 5.8E-61 T 26-04-2016 PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 Pfam PF03960 ArsC family 9 115 3.6E-19 T 26-04-2016 IPR006660 Arsenate reductase-like PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 SUPERFAMILY SSF52833 5 116 3.94E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 Gene3D G3DSA:3.40.30.10 1 116 4.5E-48 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 7.3E-45 T 26-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 PAM18_RS20870 4636bed2f34f4d4e787449df047ecbdf 117 PANTHER PTHR30041:SF4 1 116 5.8E-61 T 26-04-2016 PAM18_RS18080 41256d2135b69de30d1d1ba0acc12517 577 PANTHER PTHR39559 1 577 2.2E-258 T 26-04-2016 PAM18_RS18080 41256d2135b69de30d1d1ba0acc12517 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 10 569 3.0E-239 T 26-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PAM18_RS18080 41256d2135b69de30d1d1ba0acc12517 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 2 573 44.52 T 26-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PAM18_RS18080 41256d2135b69de30d1d1ba0acc12517 577 PIRSF PIRSF000719 1 577 4.4E-299 T 26-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PAM18_RS18080 41256d2135b69de30d1d1ba0acc12517 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 10 566 0.0 T 26-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 PAM18_RS12595 ee0d5c073ebde41f1f5d5e9253370ad6 111 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 3 103 4.0E-26 T 26-04-2016 IPR006481 Bacteriophage lambda, GpS, holin PAM18_RS12595 ee0d5c073ebde41f1f5d5e9253370ad6 111 Pfam PF05106 Phage holin family (Lysis protein S) 5 100 9.0E-31 T 26-04-2016 IPR006481 Bacteriophage lambda, GpS, holin PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 Pfam PF01025 GrpE 13 173 1.5E-51 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 152 171 2.8E-25 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 42 58 2.8E-25 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 125 140 2.8E-25 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 70 85 2.8E-25 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF58014 20 115 1.16E-26 T 26-04-2016 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF51064 118 174 4.97E-19 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:2.30.22.10 118 175 1.6E-26 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 ProSitePatterns PS01071 grpE protein signature. 128 171 - T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:3.90.20.20 19 115 1.0E-30 T 26-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 Hamap MF_01151 Protein GrpE [grpE]. 3 173 20.578 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS24940 2d844661287b9f98def46a9d20975916 186 PANTHER PTHR21237 1 176 1.0E-63 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 PANTHER PTHR39329 2 462 0.0 T 26-04-2016 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:3.20.20.70 143 450 1.8E-165 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:2.30.170.30 3 55 1.7E-25 T 26-04-2016 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 Gene3D G3DSA:1.10.220.70 56 142 2.2E-39 T 26-04-2016 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 PANTHER PTHR39329:SF1 2 462 0.0 T 26-04-2016 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 442 2.0E-220 T 26-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PAM18_RS04660 14c9598ccbcb0e0be0884f1d7c863305 464 PIRSF PIRSF018788 2 461 2.1E-241 T 26-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 Pfam PF01632 Ribosomal protein L35 2 60 3.0E-23 T 26-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 26-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 SUPERFAMILY SSF143034 2 61 6.67E-20 T 26-04-2016 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 4.6E-20 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.6E-20 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 4.6E-20 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.841 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 PANTHER PTHR33343 1 61 3.0E-23 T 26-04-2016 PAM18_RS11470 9b683c4717ddf2f13ced5e382f6c7249 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 1.0E-23 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Pfam PF00501 AMP-binding enzyme 18 404 1.1E-71 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Gene3D G3DSA:3.30.300.30 403 505 1.8E-18 T 26-04-2016 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 493 8.3E-8 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 SUPERFAMILY SSF56801 14 505 1.07E-111 T 26-04-2016 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 PANTHER PTHR24095 43 503 1.3E-97 T 26-04-2016 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Gene3D G3DSA:3.40.50.980 168 318 8.8E-26 T 26-04-2016 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Gene3D G3DSA:2.30.38.10 323 397 2.3E-20 T 26-04-2016 PAM18_RS20685 abfea31a144571f2de66aac3974cfc3e 517 Gene3D G3DSA:3.40.50.980 18 167 9.2E-24 T 26-04-2016 PAM18_RS20505 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF09722 Protein of unknown function (DUF2384) 71 120 4.9E-14 T 26-04-2016 IPR024467 Domain of unknown function DUF2384 PAM18_RS20505 a8f1ddf5bd7532ad59a4022dac55ca30 122 Gene3D G3DSA:1.10.260.40 16 50 4.6E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS20505 a8f1ddf5bd7532ad59a4022dac55ca30 122 SUPERFAMILY SSF47413 15 56 5.9E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS20505 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF01381 Helix-turn-helix 21 48 1.1E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 PANTHER PTHR11986 1 460 2.4E-299 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 PANTHER PTHR11986:SF74 1 460 2.4E-299 T 26-04-2016 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 Gene3D G3DSA:3.90.1150.10 22 93 1.5E-18 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 Gene3D G3DSA:3.90.1150.10 349 454 1.5E-18 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 Pfam PF00202 Aminotransferase class-III 51 431 3.2E-41 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 Gene3D G3DSA:3.40.640.10 95 345 2.3E-47 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS28850 ba396b17710e514630754b54793922c1 464 SUPERFAMILY SSF53383 45 455 2.53E-83 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 PANTHER PTHR10491:SF4 1 299 6.0E-96 T 26-04-2016 PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 PANTHER PTHR10491 1 299 6.0E-96 T 26-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 Gene3D G3DSA:3.40.50.720 2 169 1.6E-29 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 SUPERFAMILY SSF51735 1 296 2.34E-95 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 Pfam PF04321 RmlD substrate binding domain 3 296 4.0E-111 T 26-04-2016 IPR029903 RmlD-like substrate binding domain PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 295 3.7E-115 T 26-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 Gene3D G3DSA:3.90.25.10 222 286 7.2E-29 T 26-04-2016 PAM18_RS26995 00c53337013cefda72f714ab4f197058 302 Gene3D G3DSA:3.90.25.10 170 181 7.2E-29 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 Gene3D G3DSA:3.40.1130.10 94 242 2.3E-5 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 Pfam PF01553 Acyltransferase 90 210 2.7E-8 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 PANTHER PTHR30068:SF3 344 384 8.5E-225 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 PANTHER PTHR30068:SF3 1 327 8.5E-225 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 PANTHER PTHR30068 344 384 8.5E-225 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 PANTHER PTHR30068 1 327 8.5E-225 T 26-04-2016 PAM18_RS24185 293c81901f44f7c1ff916f0f708e5f34 386 SUPERFAMILY SSF69593 89 239 3.92E-6 T 26-04-2016 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 276 1.1E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF47384 194 277 1.82E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:3.30.565.10 287 424 4.1E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 424 5.4E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00388 211 277 6.7E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.0E-7 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:1.10.287.130 204 273 1.2E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF00672 HAMP domain 137 207 1.2E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00387 321 426 3.7E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 PANTHER PTHR24423 190 423 3.6E-58 T 26-04-2016 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 PANTHER PTHR24423 87 112 3.6E-58 T 26-04-2016 PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF55874 287 423 6.29E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS22845 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00304 156 210 5.6E-6 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 SUPERFAMILY SSF54637 5 141 1.9E-38 T 26-04-2016 IPR029069 HotDog domain PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 PRINTS PR01483 Fatty acid synthase signature 48 69 3.0E-5 T 26-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 PRINTS PR01483 Fatty acid synthase signature 26 48 3.0E-5 T 26-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 Gene3D G3DSA:3.10.129.10 9 139 1.7E-44 T 26-04-2016 IPR029069 HotDog domain PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 Pfam PF01575 MaoC like domain 16 113 3.7E-25 T 26-04-2016 IPR002539 MaoC-like domain PAM18_RS08550 17d00121ec8060824f02e5beb05c784a 156 PANTHER PTHR13078 3 156 1.1E-51 T 26-04-2016 PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 SMART SM00382 30 213 4.1E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 Gene3D G3DSA:3.40.50.300 2 226 1.8E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 SUPERFAMILY SSF52540 4 234 8.88E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 PANTHER PTHR24220:SF305 6 302 4.4E-176 T 26-04-2016 PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 PANTHER PTHR24220 6 302 4.4E-176 T 26-04-2016 PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS11040 bfa4f84708627c67d646502368d49664 310 Pfam PF00005 ABC transporter 21 165 8.2E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS25620 2a308a9aae1498703d5d03b09f0f9bad 340 Pfam PF16220 Domain of unknown function (DUF4880) 33 74 5.3E-12 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS25620 2a308a9aae1498703d5d03b09f0f9bad 340 PIRSF PIRSF018266 21 340 5.2E-97 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS25620 2a308a9aae1498703d5d03b09f0f9bad 340 PANTHER PTHR30273:SF3 24 340 7.0E-136 T 26-04-2016 PAM18_RS25620 2a308a9aae1498703d5d03b09f0f9bad 340 Pfam PF04773 FecR protein 131 226 3.2E-21 T 26-04-2016 IPR006860 FecR protein PAM18_RS25620 2a308a9aae1498703d5d03b09f0f9bad 340 PANTHER PTHR30273 24 340 7.0E-136 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 SUPERFAMILY SSF52172 1 178 3.7E-44 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 PANTHER PTHR32071:SF28 1 445 0.0 T 26-04-2016 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Gene3D G3DSA:3.40.50.2300 3 128 9.5E-36 T 26-04-2016 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Pfam PF02954 Bacterial regulatory protein, Fis family 402 442 2.3E-16 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Pfam PF00158 Sigma-54 interaction domain 135 301 5.4E-67 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Gene3D G3DSA:1.10.8.60 308 379 2.4E-25 T 26-04-2016 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 SMART SM00448 4 115 7.0E-35 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 PANTHER PTHR32071 1 445 0.0 T 26-04-2016 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Gene3D G3DSA:1.10.10.60 385 445 1.3E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Pfam PF00072 Response regulator receiver domain 7 115 2.3E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 1.5E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 1.5E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 Gene3D G3DSA:3.40.50.300 133 307 4.7E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 SUPERFAMILY SSF52540 135 377 1.15E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 SMART SM00382 155 298 8.5E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23715 575787dbdd90a9d620cab95cac969cce 445 SUPERFAMILY SSF46689 349 445 3.99E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 SMART SM00849 14 250 2.1E-25 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 397 459 2.0E-16 T 26-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 SUPERFAMILY SSF56281 3 467 2.44E-130 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 PANTHER PTHR11203 3 467 3.7E-141 T 26-04-2016 PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 Gene3D G3DSA:3.60.15.10 4 102 9.3E-52 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 Gene3D G3DSA:3.60.15.10 138 268 9.3E-52 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 Pfam PF00753 Metallo-beta-lactamase superfamily 13 227 6.5E-12 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 SMART SM01027 255 383 2.6E-56 T 26-04-2016 IPR022712 Beta-Casp domain PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 PANTHER PTHR11203:SF11 3 467 3.7E-141 T 26-04-2016 PAM18_RS07060 4fe4801c879a8539b4df9c5b735f8c0a 467 Pfam PF10996 Beta-Casp domain 255 383 5.0E-26 T 26-04-2016 IPR022712 Beta-Casp domain PAM18_RS10840 719665013b69b87d293241437d573b8a 142 PANTHER PTHR33797:SF2 1 142 6.1E-78 T 26-04-2016 PAM18_RS10840 719665013b69b87d293241437d573b8a 142 PANTHER PTHR33797 1 142 6.1E-78 T 26-04-2016 PAM18_RS10840 719665013b69b87d293241437d573b8a 142 Pfam PF02566 OsmC-like protein 44 138 5.5E-17 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS10840 719665013b69b87d293241437d573b8a 142 Gene3D G3DSA:3.30.300.20 48 140 1.7E-37 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS10840 719665013b69b87d293241437d573b8a 142 Gene3D G3DSA:2.20.25.10 1 46 7.4E-24 T 26-04-2016 PAM18_RS10840 719665013b69b87d293241437d573b8a 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 3.9E-57 T 26-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 PAM18_RS10840 719665013b69b87d293241437d573b8a 142 SUPERFAMILY SSF82784 1 140 2.09E-47 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS13835 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Gene3D G3DSA:1.10.3720.10 6 215 2.4E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13835 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 SUPERFAMILY SSF161098 7 200 5.23E-46 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13835 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 217 9.3E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13835 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 PANTHER PTHR30450:SF1 1 217 3.9E-113 T 26-04-2016 PAM18_RS13835 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 PANTHER PTHR30450 1 217 3.9E-113 T 26-04-2016 PAM18_RS02720 998679d9cf9b71f06feddcb534caeb48 202 SUPERFAMILY SSF140478 26 182 8.76E-54 T 26-04-2016 IPR023353 LemA-like domain PAM18_RS02720 998679d9cf9b71f06feddcb534caeb48 202 Gene3D G3DSA:1.20.1440.20 14 195 2.3E-63 T 26-04-2016 IPR023353 LemA-like domain PAM18_RS02720 998679d9cf9b71f06feddcb534caeb48 202 PANTHER PTHR34478:SF2 1 198 2.7E-102 T 26-04-2016 PAM18_RS02720 998679d9cf9b71f06feddcb534caeb48 202 PANTHER PTHR34478 1 198 2.7E-102 T 26-04-2016 PAM18_RS02720 998679d9cf9b71f06feddcb534caeb48 202 Pfam PF04011 LemA family 12 195 2.7E-64 T 26-04-2016 IPR007156 LemA PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 1.3E-121 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PANTHER PTHR10422 11 530 0.0 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 529 8.4E-212 T 26-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 477 2.9E-151 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 Gene3D G3DSA:1.20.210.10 15 529 7.6E-216 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 PANTHER PTHR10422:SF27 11 530 0.0 T 26-04-2016 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 SUPERFAMILY SSF81442 23 529 6.54E-193 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS00540 cc5bee05f25a00c94538a6354be68929 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 PANTHER PTHR38444:SF1 1 72 6.3E-44 T 26-04-2016 PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 PANTHER PTHR38444 1 72 6.3E-44 T 26-04-2016 PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 Gene3D G3DSA:3.90.820.10 11 69 3.2E-32 T 26-04-2016 PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 Pfam PF03621 MbtH-like protein 1 53 4.4E-25 T 26-04-2016 IPR005153 MbtH-like protein PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 SUPERFAMILY SSF160582 1 69 2.48E-30 T 26-04-2016 PAM18_RS13530 34c910016801ae359358637fc4f4c359 72 SMART SM00923 3 53 6.0E-27 T 26-04-2016 IPR005153 MbtH-like protein PAM18_RS16095 bf8985cd7a06c0a69b400732b41c62f5 405 Pfam PF01474 Class-II DAHP synthetase family 160 383 5.9E-78 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS16095 bf8985cd7a06c0a69b400732b41c62f5 405 SUPERFAMILY SSF51569 4 389 1.54E-143 T 26-04-2016 PAM18_RS16095 bf8985cd7a06c0a69b400732b41c62f5 405 PANTHER PTHR21337 9 399 6.7E-196 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS03710 bf8985cd7a06c0a69b400732b41c62f5 405 Pfam PF01474 Class-II DAHP synthetase family 160 383 5.9E-78 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS03710 bf8985cd7a06c0a69b400732b41c62f5 405 SUPERFAMILY SSF51569 4 389 1.54E-143 T 26-04-2016 PAM18_RS03710 bf8985cd7a06c0a69b400732b41c62f5 405 PANTHER PTHR21337 9 399 6.7E-196 T 26-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 Pfam PF07152 YaeQ protein 1 171 6.0E-62 T 26-04-2016 IPR009822 YaeQ PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 PANTHER PTHR38784 1 179 1.3E-95 T 26-04-2016 PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 SUPERFAMILY SSF52980 2 177 2.95E-62 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 Gene3D G3DSA:3.10.640.10 1 177 8.5E-67 T 26-04-2016 PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 PANTHER PTHR38784:SF1 1 179 1.3E-95 T 26-04-2016 PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 SMART SM01322 1 174 1.0E-93 T 26-04-2016 IPR009822 YaeQ PAM18_RS06180 3802ccb3d77506d1b6d5cb7034cd69ea 179 PIRSF PIRSF011484 1 178 7.5E-52 T 26-04-2016 IPR009822 YaeQ PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 Gene3D G3DSA:3.30.43.10 15 109 1.8E-24 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 3.0E-73 T 26-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 Gene3D G3DSA:3.30.465.10 111 231 5.6E-32 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 5.1E-172 T 26-04-2016 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 SUPERFAMILY SSF56176 19 231 7.01E-65 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 Gene3D G3DSA:1.10.45.10 432 471 4.8E-10 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 PANTHER PTHR11748:SF78 1 485 4.6E-216 T 26-04-2016 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 SUPERFAMILY SSF55103 204 473 9.16E-78 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 Pfam PF01565 FAD binding domain 56 194 7.0E-36 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS27970 5bb6ed76a110d799b81e32c3a547049f 499 PANTHER PTHR11748 1 485 4.6E-216 T 26-04-2016 PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 SUPERFAMILY SSF53474 5 275 7.03E-26 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 Pfam PF12697 Alpha/beta hydrolase family 41 263 7.7E-10 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 PANTHER PTHR11614:SF82 5 274 4.4E-117 T 26-04-2016 PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 Gene3D G3DSA:3.40.50.1820 3 239 1.4E-19 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 PANTHER PTHR11614 5 274 4.4E-117 T 26-04-2016 PAM18_RS19120 35593789bf3b60ae0c4ebf85d57364ca 279 PIRSF PIRSF037442 1 279 1.9E-76 T 26-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 SUPERFAMILY SSF47005 112 153 7.85E-10 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Pfam PF00364 Biotin-requiring enzyme 3 73 1.5E-19 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 PANTHER PTHR23151:SF65 1 369 3.2E-234 T 26-04-2016 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 163 369 4.7E-47 T 26-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Gene3D G3DSA:4.10.320.10 114 154 1.9E-15 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 PANTHER PTHR23151 1 369 3.2E-234 T 26-04-2016 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 SUPERFAMILY SSF52777 155 368 5.78E-55 T 26-04-2016 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 SUPERFAMILY SSF51230 2 84 1.44E-24 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Gene3D G3DSA:2.40.50.100 2 84 9.9E-24 T 26-04-2016 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Pfam PF02817 e3 binding domain 114 149 2.7E-13 T 26-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 PAM18_RS07965 85ceed80389cdeb380bfea88d5903535 370 Gene3D G3DSA:3.30.559.10 156 369 1.0E-49 T 26-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain PAM18_RS22835 65efca9e60a356743a07dd8250594ef3 234 SUPERFAMILY SSF56112 18 187 7.29E-10 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS22835 65efca9e60a356743a07dd8250594ef3 234 PIRSF PIRSF026326 1 234 5.5E-110 T 26-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA PAM18_RS22835 65efca9e60a356743a07dd8250594ef3 234 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 18 221 4.9E-74 T 26-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 Gene3D G3DSA:3.40.1410.10 68 236 2.4E-42 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PANTHER PTHR11751 120 143 2.6E-40 T 26-04-2016 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PANTHER PTHR11751 12 73 2.6E-40 T 26-04-2016 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 SUPERFAMILY SSF64288 59 235 1.11E-41 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 Gene3D G3DSA:1.10.10.10 10 67 7.8E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.1E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.1E-9 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 Pfam PF07702 UTRA domain 92 230 3.3E-37 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 5.8E-19 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 SMART SM00345 12 71 5.1E-19 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 SUPERFAMILY SSF46785 10 81 8.35E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PANTHER PTHR11751:SF333 120 143 2.6E-40 T 26-04-2016 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 PANTHER PTHR11751:SF333 12 73 2.6E-40 T 26-04-2016 PAM18_RS19870 9de7f9d3f2653db875f02c759c0bd47b 238 SMART SM00866 92 231 2.2E-30 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Gene3D G3DSA:3.40.50.10260 11 239 6.4E-62 T 26-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 497 21.164 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 SUPERFAMILY SSF64153 12 249 3.79E-59 T 26-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 SUPERFAMILY SSF53613 232 493 8.02E-73 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Gene3D G3DSA:3.40.1190.20 240 494 8.7E-85 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 14 213 22.674 T 26-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 211 2.7E-41 T 26-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 PIRSF PIRSF017184 10 496 8.3E-128 T 26-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 PANTHER PTHR12592 1 500 1.6E-139 T 26-04-2016 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Pfam PF01256 Carbohydrate kinase 250 485 2.6E-59 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 492 2.3E-65 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 PANTHER PTHR12592:SF0 1 500 1.6E-139 T 26-04-2016 PAM18_RS25900 b6e811a37e96e66aac4b2bd6c6badbbb 500 Pfam PF03853 YjeF-related protein N-terminus 34 192 1.3E-39 T 26-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 Pfam PF04358 DsrC like protein 7 111 4.1E-36 T 26-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 PANTHER PTHR37010 1 111 2.4E-56 T 26-04-2016 PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 6.7E-43 T 26-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 PANTHER PTHR37010:SF1 1 111 2.4E-56 T 26-04-2016 PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 PIRSF PIRSF006223 4 111 1.3E-32 T 26-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 Gene3D G3DSA:3.30.1420.10 1 40 1.6E-12 T 26-04-2016 PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 Gene3D G3DSA:1.10.10.370 41 111 7.3E-28 T 26-04-2016 PAM18_RS12155 af2c11aed6c8217619f25a7cb4963c71 111 SUPERFAMILY SSF69721 2 111 1.1E-34 T 26-04-2016 IPR025526 DsrC-like domain PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 PANTHER PTHR11091 2 334 1.1E-97 T 26-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:1.10.1530.10 3 72 1.9E-18 T 26-04-2016 PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 PANTHER PTHR11091:SF0 2 334 1.1E-97 T 26-04-2016 PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 Pfam PF02615 Malate/L-lactate dehydrogenase 5 329 3.8E-101 T 26-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 SUPERFAMILY SSF89733 2 333 3.4E-101 T 26-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS19325 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:3.30.1370.60 73 274 1.2E-78 T 26-04-2016 PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 Pfam PF08238 Sel1 repeat 59 93 4.5E-5 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 Pfam PF08238 Sel1 repeat 48 57 89.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 Pfam PF08238 Sel1 repeat 166 196 7.7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 PANTHER PTHR11102 42 220 2.3E-39 T 26-04-2016 PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 Gene3D G3DSA:1.25.40.10 41 208 4.4E-32 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 SUPERFAMILY SSF81901 22 142 6.67E-19 T 26-04-2016 PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 SMART SM00671 58 95 0.0041 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 SMART SM00671 165 197 5.2 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 SMART SM00671 132 164 120.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS26600 c2af67347dd7e70b3dfcd2cf0698478c 273 SUPERFAMILY SSF81901 117 208 1.31E-12 T 26-04-2016 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 9.2E-15 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.2E-15 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 9.2E-15 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 PANTHER PTHR22573 2 444 3.1E-174 T 26-04-2016 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Gene3D G3DSA:3.40.120.10 175 249 2.9E-27 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 1.9E-30 T 26-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 26-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Gene3D G3DSA:3.40.120.10 3 152 3.6E-44 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 SUPERFAMILY SSF53738 257 363 1.18E-29 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 SUPERFAMILY SSF53738 2 180 9.81E-47 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 8.8E-44 T 26-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 SUPERFAMILY SSF53738 155 256 2.43E-31 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Gene3D G3DSA:3.30.310.50 368 444 4.6E-18 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 8.0E-193 T 26-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 46.762 T 26-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 1.9E-19 T 26-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 439 1.9E-11 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 Gene3D G3DSA:3.40.120.10 250 365 4.5E-31 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 SUPERFAMILY SSF55957 357 444 1.7E-20 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PAM18_RS24875 1654615152f2555fc6d7cf11d4b41498 445 PANTHER PTHR22573:SF15 2 444 3.1E-174 T 26-04-2016 PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 Gene3D G3DSA:2.40.50.100 46 79 3.8E-16 T 26-04-2016 PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 Gene3D G3DSA:2.40.50.100 182 215 3.8E-16 T 26-04-2016 PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 260 4.5E-14 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 PANTHER PTHR30367 11 319 2.1E-168 T 26-04-2016 PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 SUPERFAMILY SSF111369 45 233 1.96E-17 T 26-04-2016 PAM18_RS13405 8a7b15c9ac8978070a3104bdcc9e0720 334 PANTHER PTHR30367:SF5 11 319 2.1E-168 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Pfam PF07085 DRTGG domain 223 335 2.8E-31 T 26-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Gene3D G3DSA:3.40.50.10750 512 671 1.5E-63 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Pfam PF01515 Phosphate acetyl/butaryl transferase 380 695 6.2E-118 T 26-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 395 695 2.2E-125 T 26-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 PANTHER PTHR23406 167 701 4.9E-54 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 SUPERFAMILY SSF75138 220 343 3.92E-25 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Gene3D G3DSA:3.40.50.300 1 215 9.2E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Pfam PF13500 AAA domain 2 219 3.4E-33 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 PANTHER PTHR23406:SF3 167 701 4.9E-54 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 PIRSF PIRSF006107 1 703 0.0 T 26-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 Gene3D G3DSA:3.40.1390.20 216 355 8.6E-30 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 SUPERFAMILY SSF53659 381 698 1.27E-88 T 26-04-2016 PAM18_RS21475 70ac5c68293dd26f41dd2d453e084ecf 704 SUPERFAMILY SSF52540 1 229 1.13E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 Pfam PF01476 LysM domain 69 109 1.9E-11 T 26-04-2016 IPR018392 LysM domain PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 Gene3D G3DSA:2.70.70.10 173 295 1.8E-38 T 26-04-2016 PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 PANTHER PTHR21666 173 297 1.6E-41 T 26-04-2016 PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 SMART SM00257 68 112 1.9E-11 T 26-04-2016 IPR018392 LysM domain PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 Gene3D G3DSA:3.10.350.10 68 109 2.7E-13 T 26-04-2016 IPR018392 LysM domain PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 SUPERFAMILY SSF51261 68 294 8.89E-53 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS06695 1c5739dcc0f8cf27074984e8386df662 297 Pfam PF01551 Peptidase family M23 197 290 2.9E-30 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 PANTHER PTHR10108 2 231 3.3E-151 T 26-04-2016 PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 Pfam PF13489 Methyltransferase domain 47 199 3.5E-27 T 26-04-2016 PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 PANTHER PTHR10108:SF910 2 231 3.3E-151 T 26-04-2016 PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 38.774 T 26-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 SUPERFAMILY SSF53335 12 226 9.76E-52 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 Gene3D G3DSA:3.40.50.150 19 218 4.8E-49 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09230 e610ab7299ec35d3d3fba79385b3fbca 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 2.1E-87 T 26-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 PAM18_RS08010 c4a090a3e276c9090f045ca7addcd625 205 PIRSF PIRSF019876 1 205 3.9E-93 T 26-04-2016 IPR010495 Haem-binding HasA PAM18_RS08010 c4a090a3e276c9090f045ca7addcd625 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 2.6E-77 T 26-04-2016 IPR010495 Haem-binding HasA PAM18_RS08010 c4a090a3e276c9090f045ca7addcd625 205 SUPERFAMILY SSF54621 2 176 1.19E-63 T 26-04-2016 IPR010495 Haem-binding HasA PAM18_RS08010 c4a090a3e276c9090f045ca7addcd625 205 Gene3D G3DSA:3.30.1500.10 1 182 3.9E-72 T 26-04-2016 IPR010495 Haem-binding HasA PAM18_RS27955 a1aca302b5f933199199a3ca0f30be5b 133 PANTHER PTHR34309:SF4 1 133 9.1E-72 T 26-04-2016 PAM18_RS27955 a1aca302b5f933199199a3ca0f30be5b 133 SUPERFAMILY SSF143744 2 131 2.75E-34 T 26-04-2016 PAM18_RS27955 a1aca302b5f933199199a3ca0f30be5b 133 PANTHER PTHR34309 1 133 9.1E-72 T 26-04-2016 PAM18_RS27955 a1aca302b5f933199199a3ca0f30be5b 133 Pfam PF03928 Haem-degrading 10 129 1.7E-29 T 26-04-2016 IPR005624 Haem-degrading PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 SUPERFAMILY SSF55846 10 174 2.22E-43 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 Gene3D G3DSA:3.40.80.10 3 177 5.3E-54 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 PANTHER PTHR30417 1 254 4.9E-175 T 26-04-2016 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 SMART SM00644 7 158 1.3E-46 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 3.7E-18 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 PANTHER PTHR30417:SF5 1 254 4.9E-175 T 26-04-2016 PAM18_RS21600 e61fd8a885d5d624e2ad907d81b82a0f 255 SUPERFAMILY SSF47090 182 253 2.98E-18 T 26-04-2016 IPR002477 Peptidoglycan binding-like PAM18_RS28715 690b92ce7547899a69377e233782619f 714 SUPERFAMILY SSF51998 282 440 4.27E-177 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 SUPERFAMILY SSF51998 15 219 4.27E-177 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 SUPERFAMILY SSF51998 508 690 4.27E-177 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PANTHER PTHR11573:SF3 486 658 3.1E-224 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PANTHER PTHR11573:SF3 18 464 3.1E-224 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 Gene3D G3DSA:3.20.70.20 508 556 4.4E-118 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 Gene3D G3DSA:3.20.70.20 282 440 4.4E-118 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 Gene3D G3DSA:3.20.70.20 11 219 4.4E-118 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 Gene3D G3DSA:3.20.70.20 609 651 4.4E-118 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PANTHER PTHR11573 486 658 3.1E-224 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PANTHER PTHR11573 18 464 3.1E-224 T 26-04-2016 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 23 658 1.9E-182 T 26-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 102 650 5.4E-141 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 354 377 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 392 414 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 177 196 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 535 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 316 327 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28715 690b92ce7547899a69377e233782619f 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 2.2E-18 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 488 82.591 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 188 2.8E-54 T 26-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PANTHER PTHR23429 1 486 4.4E-213 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 SUPERFAMILY SSF55347 178 487 2.19E-116 T 26-04-2016 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.5E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 6.5E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 6.5E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 6.5E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 6.5E-49 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 26-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 486 3.6E-119 T 26-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 Gene3D G3DSA:3.30.360.10 188 486 1.6E-125 T 26-04-2016 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 486 1.7E-174 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 Gene3D G3DSA:3.40.50.720 8 187 4.6E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 SUPERFAMILY SSF51735 5 191 4.13E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PIRSF PIRSF000110 2 488 9.9E-173 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 PAM18_RS28420 459cd2194bcb458f08caf1f71e3e0814 488 PANTHER PTHR23429:SF0 1 486 4.4E-213 T 26-04-2016 PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 PIRSF PIRSF016184 3 278 2.0E-61 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 Gene3D G3DSA:3.10.310.10 127 267 1.2E-38 T 26-04-2016 PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 256 2.5E-50 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 Pfam PF02567 Phenazine biosynthesis-like protein 10 256 7.9E-50 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 Gene3D G3DSA:3.10.310.10 4 123 6.5E-40 T 26-04-2016 PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 PANTHER PTHR13774 5 276 1.1E-115 T 26-04-2016 PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 SUPERFAMILY SSF54506 4 276 9.42E-68 T 26-04-2016 PAM18_RS18115 e7fec053bd72258698ba2416c8565264 278 PANTHER PTHR13774:SF18 5 276 1.1E-115 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 Gene3D G3DSA:1.20.200.10 107 373 2.2E-89 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PANTHER PTHR11444 1 458 1.1E-234 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PANTHER PTHR11444:SF21 1 458 1.1E-234 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 Pfam PF00206 Lyase 15 304 9.8E-67 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 3.7E-12 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.7E-12 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 3.7E-12 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 3.7E-12 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 SMART SM00998 367 446 5.4E-29 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 Gene3D G3DSA:1.10.40.30 374 446 2.7E-30 T 26-04-2016 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 Gene3D G3DSA:1.10.275.10 13 106 1.8E-33 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 8.8E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 8.8E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 8.8E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 8.8E-25 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 SUPERFAMILY SSF48557 9 449 4.87E-125 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 445 8.8E-20 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 PAM18_RS01140 8061a0ab28410f1d85b577a2e1898940 459 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 9 352 5.8E-141 T 26-04-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.920 227 344 2.1E-43 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02779 Transketolase, pyrimidine binding domain 16 191 2.7E-44 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52518 16 231 8.57E-67 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02780 Transketolase, C-terminal domain 224 340 2.4E-35 T 26-04-2016 IPR033248 Transketolase, C-terminal domain PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.970 15 225 3.1E-83 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 PANTHER PTHR11624:SF55 1 350 1.3E-270 T 26-04-2016 PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52922 218 348 2.88E-41 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 SMART SM00861 17 192 9.1E-68 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS14345 5278680366a40c25a809e2a698f14b4e 350 PANTHER PTHR11624 1 350 1.3E-270 T 26-04-2016 IPR033247 Transketolase family PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 1.7E-43 T 26-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 SUPERFAMILY SSF69055 300 393 1.7E-30 T 26-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 389 9.3E-158 T 26-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 PANTHER PTHR30525 1 396 2.7E-224 T 26-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 SUPERFAMILY SSF51735 4 153 9.97E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Gene3D G3DSA:1.10.1740.10 311 393 4.0E-30 T 26-04-2016 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 SUPERFAMILY SSF55347 129 272 1.8E-61 T 26-04-2016 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Gene3D G3DSA:3.40.50.720 2 153 3.2E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 7.8E-38 T 26-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 PIRSF PIRSF006205 4 396 1.3E-148 T 26-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 46.959 T 26-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06560 c59dcb149784e9b68dec1a7a9e07b570 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 9.8E-43 T 26-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS01615 4f135165b5b8132044a7209502a87a2d 464 PANTHER PTHR11785:SF346 4 456 2.1E-292 T 26-04-2016 PAM18_RS01615 4f135165b5b8132044a7209502a87a2d 464 Pfam PF00324 Amino acid permease 37 431 2.6E-35 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS01615 4f135165b5b8132044a7209502a87a2d 464 PANTHER PTHR11785 4 456 2.1E-292 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS01615 4f135165b5b8132044a7209502a87a2d 464 PIRSF PIRSF006060 17 453 8.0E-64 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS01595 7ecf07cddf9b19006018c4eefa038d4c 221 SUPERFAMILY SSF56529 12 220 1.26E-65 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS01595 7ecf07cddf9b19006018c4eefa038d4c 221 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 20 220 5.5E-54 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS01595 7ecf07cddf9b19006018c4eefa038d4c 221 PANTHER PTHR11820 12 212 2.4E-80 T 26-04-2016 PAM18_RS01595 7ecf07cddf9b19006018c4eefa038d4c 221 Gene3D G3DSA:3.90.850.10 13 220 3.7E-71 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 SUPERFAMILY SSF53850 29 345 1.18E-67 T 26-04-2016 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 Pfam PF13416 Bacterial extracellular solute-binding protein 49 303 2.2E-46 T 26-04-2016 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 Gene3D G3DSA:3.40.190.10 28 144 6.5E-9 T 26-04-2016 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 PANTHER PTHR30222 10 348 4.6E-177 T 26-04-2016 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 PANTHER PTHR30222:SF2 10 348 4.6E-177 T 26-04-2016 PAM18_RS03060 4c16dca0eb8049a6071fbf4ac8108c9e 348 Gene3D G3DSA:3.40.190.10 145 288 6.2E-34 T 26-04-2016 PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 Gene3D G3DSA:3.40.470.10 7 228 3.4E-103 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 41.576 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 SUPERFAMILY SSF52141 9 228 1.74E-95 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 220 4.2E-84 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 SMART SM00987 56 216 1.2E-38 T 26-04-2016 PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 Pfam PF03167 Uracil DNA glycosylase superfamily 60 215 6.0E-25 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 SMART SM00986 56 216 1.2E-38 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 26-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 PAM18_RS21895 76152303a2129beeac0abc2bb3748ffa 231 PANTHER PTHR11264 10 230 6.6E-140 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 PAM18_RS21755 e0ed1cd9daa73737e8fa12e477065a7e 250 PANTHER PTHR35936 1 249 6.5E-83 T 26-04-2016 PAM18_RS21755 e0ed1cd9daa73737e8fa12e477065a7e 250 PANTHER PTHR35936:SF3 1 249 6.5E-83 T 26-04-2016 PAM18_RS21755 e0ed1cd9daa73737e8fa12e477065a7e 250 SUPERFAMILY SSF53850 21 245 5.65E-20 T 26-04-2016 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 486 1.9E-254 T 26-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 SUPERFAMILY SSF53720 3 456 2.23E-124 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 Gene3D G3DSA:3.40.309.10 258 444 3.0E-44 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 Gene3D G3DSA:3.40.605.10 4 257 2.5E-73 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 PANTHER PTHR11699 1 462 0.0 T 26-04-2016 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 487 58.8 T 26-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 Pfam PF00171 Aldehyde dehydrogenase family 10 461 1.9E-124 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS21155 59464eb1bbbb4ae7983b382f9a404bc0 487 PANTHER PTHR11699:SF197 1 462 0.0 T 26-04-2016 PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PANTHER PTHR10625 26 75 3.8E-104 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PANTHER PTHR10625 99 336 3.8E-104 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 SUPERFAMILY SSF52768 3 341 1.39E-85 T 26-04-2016 PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 1.3E-12 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 1.3E-12 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 1.3E-12 T 26-04-2016 IPR000286 Histone deacetylase superfamily PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PANTHER PTHR10625:SF121 26 75 3.8E-104 T 26-04-2016 PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 PANTHER PTHR10625:SF121 99 336 3.8E-104 T 26-04-2016 PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 Pfam PF00850 Histone deacetylase domain 28 336 5.0E-61 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS01610 dfa14dfde1e0c12841c38bb2072fb891 344 Gene3D G3DSA:3.40.800.20 4 339 1.6E-71 T 26-04-2016 IPR023801 Histone deacetylase domain PAM18_RS12430 9ce38a4764219eb8adfd336d7f19ab0b 382 PANTHER PTHR38674 1 381 1.3E-147 T 26-04-2016 PAM18_RS12430 9ce38a4764219eb8adfd336d7f19ab0b 382 Pfam PF00487 Fatty acid desaturase 114 329 1.3E-27 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS12430 9ce38a4764219eb8adfd336d7f19ab0b 382 PANTHER PTHR38674:SF1 1 381 1.3E-147 T 26-04-2016 PAM18_RS22215 fefa55c94e7b5222452c8b6b0fbab961 368 PANTHER PTHR30570 1 368 1.7E-108 T 26-04-2016 PAM18_RS22215 fefa55c94e7b5222452c8b6b0fbab961 368 SUPERFAMILY SSF53850 24 366 1.28E-70 T 26-04-2016 PAM18_RS22215 fefa55c94e7b5222452c8b6b0fbab961 368 Gene3D G3DSA:3.40.190.10 114 300 1.1E-30 T 26-04-2016 PAM18_RS22215 fefa55c94e7b5222452c8b6b0fbab961 368 Pfam PF12849 PBP superfamily domain 21 313 8.3E-31 T 26-04-2016 IPR024370 PBP domain PAM18_RS22215 fefa55c94e7b5222452c8b6b0fbab961 368 PANTHER PTHR30570:SF0 1 368 1.7E-108 T 26-04-2016 PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02779 Transketolase, pyrimidine binding domain 4 189 5.5E-56 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.920 207 330 8.6E-46 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52518 3 213 6.87E-64 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.970 3 205 3.0E-81 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52922 198 333 6.02E-42 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 PANTHER PTHR11624 3 336 2.1E-180 T 26-04-2016 IPR033247 Transketolase family PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02780 Transketolase, C-terminal domain 203 325 6.9E-44 T 26-04-2016 IPR033248 Transketolase, C-terminal domain PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 PANTHER PTHR11624:SF77 3 336 2.1E-180 T 26-04-2016 PAM18_RS04015 7650e036f9f5caf0eb2cc32f3f388a5c 339 SMART SM00861 5 189 1.5E-58 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS16945 1e8b3b51ab262dda3307873085636689 240 PANTHER PTHR11922:SF34 1 198 4.0E-40 T 26-04-2016 PAM18_RS16945 1e8b3b51ab262dda3307873085636689 240 Pfam PF00117 Glutamine amidotransferase class-I 92 191 3.2E-10 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS16945 1e8b3b51ab262dda3307873085636689 240 SUPERFAMILY SSF52317 3 228 1.3E-39 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16945 1e8b3b51ab262dda3307873085636689 240 Gene3D G3DSA:3.40.50.880 18 216 2.9E-41 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS16945 1e8b3b51ab262dda3307873085636689 240 PANTHER PTHR11922 1 198 4.0E-40 T 26-04-2016 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 PANTHER PTHR11695 15 319 2.7E-101 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 PANTHER PTHR11695:SF558 15 319 2.7E-101 T 26-04-2016 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 Gene3D G3DSA:3.90.180.10 1 143 1.3E-36 T 26-04-2016 IPR011032 GroES-like PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 Pfam PF00107 Zinc-binding dehydrogenase 151 261 1.0E-13 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 Gene3D G3DSA:3.40.50.720 144 259 7.7E-21 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 71 7.9E-5 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 SUPERFAMILY SSF51735 113 286 2.07E-27 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 SMART SM00829 10 317 2.4E-13 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS21335 a20cbd383a88887a0f7e526cb5700cae 319 SUPERFAMILY SSF50129 1 134 2.89E-33 T 26-04-2016 IPR011032 GroES-like PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 4.9E-149 T 26-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 Gene3D G3DSA:3.60.20.10 1 224 1.1E-70 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 PIRSF PIRSF001589 1 609 8.8E-142 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 Pfam PF13537 Glutamine amidotransferase domain 48 167 1.2E-45 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 Gene3D G3DSA:3.40.50.620 456 574 1.2E-74 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 Gene3D G3DSA:3.40.50.620 225 398 1.2E-74 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 Pfam PF00733 Asparagine synthase 243 576 9.7E-96 T 26-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 SUPERFAMILY SSF52402 233 394 4.71E-69 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 SUPERFAMILY SSF52402 452 574 4.71E-69 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 PANTHER PTHR11772:SF7 438 573 2.5E-250 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 PANTHER PTHR11772:SF7 2 396 2.5E-250 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 SUPERFAMILY SSF56235 1 224 1.54E-62 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 PANTHER PTHR11772 438 573 2.5E-250 T 26-04-2016 PAM18_RS15180 ba79a3e7e0066f3b794e8bff0a16c001 610 PANTHER PTHR11772 2 396 2.5E-250 T 26-04-2016 PAM18_RS00455 7fa439856f827fb42edfd906d73a1b12 348 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 319 1.1E-107 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS00455 7fa439856f827fb42edfd906d73a1b12 348 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 22 319 9.7E-111 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS00455 7fa439856f827fb42edfd906d73a1b12 348 PANTHER PTHR35564:SF2 4 348 1.0E-184 T 26-04-2016 PAM18_RS00455 7fa439856f827fb42edfd906d73a1b12 348 PANTHER PTHR35564 4 348 1.0E-184 T 26-04-2016 PAM18_RS16870 9acc0f9567e4d0e4da55c0833a7a9dfb 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 203 4.2E-125 T 26-04-2016 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 PAM18_RS16870 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.40.50.1000 132 178 1.3E-5 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS16870 9acc0f9567e4d0e4da55c0833a7a9dfb 205 SUPERFAMILY SSF56784 2 191 1.15E-44 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS16870 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.90.1470.10 13 128 5.1E-46 T 26-04-2016 PAM18_RS16870 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 160 7.6E-10 T 26-04-2016 PAM18_RS05015 37b93541ce5bf7add333a58ee8ed5b43 193 SUPERFAMILY SSF52499 10 191 1.7E-51 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05015 37b93541ce5bf7add333a58ee8ed5b43 193 Pfam PF00857 Isochorismatase family 14 185 5.5E-35 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05015 37b93541ce5bf7add333a58ee8ed5b43 193 PANTHER PTHR11080 12 191 2.6E-73 T 26-04-2016 PAM18_RS05015 37b93541ce5bf7add333a58ee8ed5b43 193 PANTHER PTHR11080:SF16 12 191 2.6E-73 T 26-04-2016 PAM18_RS05015 37b93541ce5bf7add333a58ee8ed5b43 193 Gene3D G3DSA:3.40.50.850 9 191 5.0E-53 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS02995 d8f99861a3429e5a4e910672b8d4c49b 126 Pfam PF04379 Protein of unknown function (DUF525) 18 102 5.8E-36 T 26-04-2016 IPR007474 ApaG domain PAM18_RS02995 d8f99861a3429e5a4e910672b8d4c49b 126 SUPERFAMILY SSF110069 4 126 3.01E-50 T 26-04-2016 IPR007474 ApaG domain PAM18_RS02995 d8f99861a3429e5a4e910672b8d4c49b 126 Gene3D G3DSA:2.60.40.1470 3 125 7.8E-48 T 26-04-2016 IPR007474 ApaG domain PAM18_RS02995 d8f99861a3429e5a4e910672b8d4c49b 126 PANTHER PTHR14289 1 123 1.2E-59 T 26-04-2016 PAM18_RS02995 d8f99861a3429e5a4e910672b8d4c49b 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 34.651 T 26-04-2016 IPR023065 Uncharacterised protein family ApaG PAM18_RS16210 eb3a71431d192e9156c89172a030c43d 192 Pfam PF13023 HD domain 16 170 8.6E-41 T 26-04-2016 IPR006674 HD domain PAM18_RS16210 eb3a71431d192e9156c89172a030c43d 192 SUPERFAMILY SSF109604 7 179 3.93E-38 T 26-04-2016 PAM18_RS16210 eb3a71431d192e9156c89172a030c43d 192 Gene3D G3DSA:1.10.3210.10 7 177 8.0E-41 T 26-04-2016 IPR006674 HD domain PAM18_RS16210 eb3a71431d192e9156c89172a030c43d 192 PANTHER PTHR11845 6 190 3.2E-47 T 26-04-2016 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 Gene3D G3DSA:3.30.70.250 126 197 3.9E-29 T 26-04-2016 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 311 2.8E-35 T 26-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 Pfam PF00698 Acyl transferase domain 7 276 2.3E-41 T 26-04-2016 IPR014043 Acyl transferase PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF55048 129 198 3.01E-17 T 26-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 PIRSF PIRSF000446 2 311 5.4E-114 T 26-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 290 1.8E-111 T 26-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 PANTHER PTHR10982 4 302 1.4E-141 T 26-04-2016 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 Gene3D G3DSA:3.40.366.10 198 294 3.2E-69 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 Gene3D G3DSA:3.40.366.10 4 123 3.2E-69 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF52151 199 299 6.28E-73 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS10235 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF52151 5 129 6.28E-73 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS26475 9a074bb9ba9a8da69edd38438975a1d2 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 2.0E-36 T 26-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PAM18_RS26475 9a074bb9ba9a8da69edd38438975a1d2 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 5.9E-35 T 26-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 Gene3D G3DSA:3.40.190.10 97 195 1.5E-17 T 26-04-2016 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 Pfam PF03466 LysR substrate binding domain 101 288 1.6E-28 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 3.7E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 Gene3D G3DSA:1.10.10.10 12 94 4.3E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 PANTHER PTHR30579:SF0 7 300 1.1E-124 T 26-04-2016 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 SUPERFAMILY SSF46785 6 119 1.74E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 Gene3D G3DSA:3.40.190.10 196 246 1.7E-9 T 26-04-2016 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 PANTHER PTHR30579 7 300 1.1E-124 T 26-04-2016 PAM18_RS19875 a343ccaba3fb008e6622d8829d2149ec 300 SUPERFAMILY SSF53850 101 291 6.52E-27 T 26-04-2016 PAM18_RS14645 8d34101e8c18357f7d5f8f1e1ee04cab 294 SUPERFAMILY SSF47240 1 286 5.8E-86 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS14645 8d34101e8c18357f7d5f8f1e1ee04cab 294 Gene3D G3DSA:1.20.1260.10 1 199 3.2E-77 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS14645 8d34101e8c18357f7d5f8f1e1ee04cab 294 Pfam PF05067 Manganese containing catalase 1 293 4.6E-115 T 26-04-2016 IPR007760 Manganese catalase PAM18_RS14645 8d34101e8c18357f7d5f8f1e1ee04cab 294 PANTHER PTHR30565 2 277 3.3E-171 T 26-04-2016 PAM18_RS14645 8d34101e8c18357f7d5f8f1e1ee04cab 294 PANTHER PTHR30565:SF3 2 277 3.3E-171 T 26-04-2016 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Gene3D G3DSA:3.40.50.970 5 178 1.2E-62 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 PANTHER PTHR18968 1 545 0.0 T 26-04-2016 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 SUPERFAMILY SSF52467 160 356 3.97E-38 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 537 3.4E-42 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 SUPERFAMILY SSF52518 369 547 1.32E-56 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Gene3D G3DSA:3.40.50.970 370 547 9.4E-59 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Gene3D G3DSA:3.40.50.1220 188 337 3.9E-36 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 170 8.9E-55 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 SUPERFAMILY SSF52518 7 182 2.45E-55 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 PANTHER PTHR18968:SF120 1 545 0.0 T 26-04-2016 PAM18_RS15430 5027e98d538130bc748e5b548347e36c 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 332 1.3E-28 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PAM18_RS13465 a8859af4f39e353148b5599666832d98 434 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 47 415 8.1E-134 T 26-04-2016 IPR013397 CRISPR-associated protein Csy1 PAM18_RS13465 a8859af4f39e353148b5599666832d98 434 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 46 422 6.7E-116 T 26-04-2016 IPR013397 CRISPR-associated protein Csy1 PAM18_RS25770 b88ce0cdb0633ec292059f968e9df6fe 283 SUPERFAMILY SSF82861 29 112 1.12E-15 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS25770 b88ce0cdb0633ec292059f968e9df6fe 283 PANTHER PTHR30221:SF3 1 134 4.1E-82 T 26-04-2016 PAM18_RS25770 b88ce0cdb0633ec292059f968e9df6fe 283 Pfam PF00924 Mechanosensitive ion channel 74 134 1.4E-6 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS25770 b88ce0cdb0633ec292059f968e9df6fe 283 PANTHER PTHR30221 1 134 4.1E-82 T 26-04-2016 PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.8E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.8E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.8E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.8E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 SUPERFAMILY SSF51735 5 258 3.29E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.1E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.1E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 Pfam PF00106 short chain dehydrogenase 5 190 3.4E-49 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 Gene3D G3DSA:3.40.50.720 5 226 1.4E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 176 0.0092 T 26-04-2016 PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PANTHER PTHR24322 7 134 3.6E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS08675 fef2379fe989a36c1d6e63983bd99d02 270 PANTHER PTHR24322 150 182 3.6E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS16925 2755af2505e318438ee9ca2f5c92e0a1 168 PANTHER PTHR12521 1 165 2.6E-43 T 26-04-2016 PAM18_RS16925 2755af2505e318438ee9ca2f5c92e0a1 168 SUPERFAMILY SSF52949 1 155 3.36E-32 T 26-04-2016 PAM18_RS16925 2755af2505e318438ee9ca2f5c92e0a1 168 Pfam PF01661 Macro domain 28 137 3.9E-6 T 26-04-2016 IPR002589 Macro domain PAM18_RS16925 2755af2505e318438ee9ca2f5c92e0a1 168 SMART SM00506 1 140 3.2E-5 T 26-04-2016 IPR002589 Macro domain PAM18_RS20320 c610b1ffb03a7349b0fcf293d51abc98 132 PANTHER PTHR36849 1 117 3.0E-58 T 26-04-2016 PAM18_RS20320 c610b1ffb03a7349b0fcf293d51abc98 132 PANTHER PTHR36849:SF1 1 117 3.0E-58 T 26-04-2016 PAM18_RS20320 c610b1ffb03a7349b0fcf293d51abc98 132 Pfam PF04343 Protein of unknown function, DUF488 4 111 7.1E-30 T 26-04-2016 IPR007438 Protein of unknown function DUF488 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 PANTHER PTHR21621:SF0 1 288 1.8E-130 T 26-04-2016 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 SUPERFAMILY SSF56059 98 288 9.43E-50 T 26-04-2016 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 8.0E-87 T 26-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.1490.20 103 173 6.3E-7 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.391 T 26-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 PANTHER PTHR21621 1 288 1.8E-130 T 26-04-2016 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.40.50.20 8 102 1.2E-17 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.470.20 174 276 3.0E-35 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS27175 76b6eb5280add0950e381fc6160ab8df 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 9.6E-69 T 26-04-2016 IPR013651 ATP-grasp fold, RimK-type PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 PANTHER PTHR39569 2 454 3.2E-153 T 26-04-2016 PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 PANTHER PTHR39569:SF1 2 454 3.2E-153 T 26-04-2016 PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 SMART SM01118 2 207 1.4E-32 T 26-04-2016 IPR023577 CYTH domain PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 Pfam PF01928 CYTH domain 3 201 5.3E-38 T 26-04-2016 IPR023577 CYTH domain PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 SUPERFAMILY SSF55154 1 211 1.96E-40 T 26-04-2016 IPR033469 CYTH-like domain PAM18_RS27235 bcdc1229be6a994b223ef0042bbbb5ff 454 Gene3D G3DSA:2.40.320.10 1 213 1.6E-32 T 26-04-2016 IPR023577 CYTH domain PAM18_RS18885 06eaa8e12853c0913c1ecfbd58f78c69 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 7 179 8.6E-44 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS18885 06eaa8e12853c0913c1ecfbd58f78c69 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 181 2.7E-32 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS18885 06eaa8e12853c0913c1ecfbd58f78c69 195 SUPERFAMILY SSF101327 9 181 2.48E-19 T 26-04-2016 IPR011978 Uncharacterised protein family UPF0149 PAM18_RS13985 5174a07e7468b83eaac064c22f7bc159 173 Pfam PF13671 AAA domain 9 139 2.2E-10 T 26-04-2016 PAM18_RS13985 5174a07e7468b83eaac064c22f7bc159 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 168 1.5E-65 T 26-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 PAM18_RS13985 5174a07e7468b83eaac064c22f7bc159 173 PANTHER PTHR11603 1 157 2.9E-69 T 26-04-2016 PAM18_RS13985 5174a07e7468b83eaac064c22f7bc159 173 SUPERFAMILY SSF52540 7 167 1.75E-25 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13985 5174a07e7468b83eaac064c22f7bc159 173 Gene3D G3DSA:3.40.50.300 6 166 4.1E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11950 b180eee267a422bd6af96f5ecc0a8a76 486 Pfam PF00361 Proton-conducting membrane transporter 122 419 1.6E-80 T 26-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PAM18_RS11950 b180eee267a422bd6af96f5ecc0a8a76 486 PANTHER PTHR22773 1 480 9.3E-184 T 26-04-2016 PAM18_RS11950 b180eee267a422bd6af96f5ecc0a8a76 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 474 17.864 T 26-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PAM18_RS11950 b180eee267a422bd6af96f5ecc0a8a76 486 PANTHER PTHR22773:SF41 1 480 9.3E-184 T 26-04-2016 PAM18_RS11950 b180eee267a422bd6af96f5ecc0a8a76 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 473 1.5E-128 T 26-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 Gene3D G3DSA:1.10.10.60 269 312 1.1E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 Gene3D G3DSA:1.10.10.60 215 268 2.1E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 SUPERFAMILY SSF46689 268 313 2.11E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 PANTHER PTHR11019:SF54 27 313 3.4E-69 T 26-04-2016 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 Pfam PF12833 Helix-turn-helix domain 238 312 1.4E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 SUPERFAMILY SSF46689 218 266 7.62E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 SMART SM00342 232 313 6.6E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS14180 35773d6670bf002245cf4146899f1d29 314 PANTHER PTHR11019 27 313 3.4E-69 T 26-04-2016 PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 Gene3D G3DSA:2.40.50.100 222 258 1.8E-8 T 26-04-2016 PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 Gene3D G3DSA:2.40.50.100 63 98 1.8E-8 T 26-04-2016 PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 PANTHER PTHR30386:SF3 50 361 2.1E-81 T 26-04-2016 PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 314 1.0E-11 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 PANTHER PTHR30386 50 361 2.1E-81 T 26-04-2016 PAM18_RS23940 b03c4cc00f75308b3af4c8fb5264beca 425 SUPERFAMILY SSF111369 56 124 1.96E-7 T 26-04-2016 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 Pfam PF02416 mttA/Hcf106 family 4 49 4.2E-8 T 26-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 76 2.8E-24 T 26-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 PANTHER PTHR33162:SF4 1 134 3.5E-33 T 26-04-2016 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 PANTHER PTHR33162 1 134 3.5E-33 T 26-04-2016 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 116 16.967 T 26-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.7E-19 T 26-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.7E-19 T 26-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PAM18_RS26510 031afb42dd71c80ae7419acb5ac73615 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.7E-19 T 26-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 PAM18_RS00445 077f7e6f91d94517e98280022aad4d18 169 PANTHER PTHR38595 2 169 5.4E-89 T 26-04-2016 PAM18_RS00445 077f7e6f91d94517e98280022aad4d18 169 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 161 1.3E-27 T 26-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein PAM18_RS00445 077f7e6f91d94517e98280022aad4d18 169 Pfam PF04965 Gene 25-like lysozyme 39 141 6.4E-22 T 26-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD PAM18_RS00445 077f7e6f91d94517e98280022aad4d18 169 SUPERFAMILY SSF160719 39 152 1.44E-9 T 26-04-2016 PAM18_RS00445 077f7e6f91d94517e98280022aad4d18 169 PANTHER PTHR38595:SF2 2 169 5.4E-89 T 26-04-2016 PAM18_RS02735 d486da688892f67fbae13c101a785bc8 128 Pfam PF01124 MAPEG family 3 127 7.6E-22 T 26-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PAM18_RS02735 d486da688892f67fbae13c101a785bc8 128 PANTHER PTHR35371:SF1 1 128 9.4E-35 T 26-04-2016 PAM18_RS02735 d486da688892f67fbae13c101a785bc8 128 SUPERFAMILY SSF161084 2 125 9.03E-23 T 26-04-2016 PAM18_RS02735 d486da688892f67fbae13c101a785bc8 128 Gene3D G3DSA:1.20.120.550 2 125 4.0E-16 T 26-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PAM18_RS02735 d486da688892f67fbae13c101a785bc8 128 PANTHER PTHR35371 1 128 9.4E-35 T 26-04-2016 PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 SUPERFAMILY SSF55073 216 366 4.47E-46 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 SMART SM00267 200 369 8.3E-59 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 365 2.8E-43 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 PANTHER PTHR10799:SF710 87 365 4.9E-26 T 26-04-2016 PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 PANTHER PTHR10799 87 365 4.9E-26 T 26-04-2016 PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 Gene3D G3DSA:3.30.70.270 213 367 1.8E-50 T 26-04-2016 PAM18_RS22600 93e684bb18d92e58269098e4265cec47 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 367 5.5E-42 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 PANTHER PTHR24220:SF347 5 254 5.2E-180 T 26-04-2016 PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 SUPERFAMILY SSF52540 4 248 1.89E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 Gene3D G3DSA:3.40.50.300 4 249 8.0E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 Pfam PF00005 ABC transporter 19 178 5.2E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 SMART SM00382 28 225 3.2E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 PIRSF PIRSF039085 1 254 1.3E-116 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS21185 bee4633a6800a4b8c341bd954915e949 254 PANTHER PTHR24220 5 254 5.2E-180 T 26-04-2016 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 PANTHER PTHR30173 3 194 3.1E-96 T 26-04-2016 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 Pfam PF08281 Sigma-70, region 4 132 184 4.5E-11 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 Pfam PF04542 Sigma-70 region 2 32 98 3.2E-16 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 Gene3D G3DSA:1.10.10.10 131 191 1.1E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 PANTHER PTHR30173:SF29 3 194 3.1E-96 T 26-04-2016 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 8.6E-28 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 SUPERFAMILY SSF88659 115 190 1.07E-14 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 Gene3D G3DSA:1.10.1740.10 12 117 4.5E-31 T 26-04-2016 PAM18_RS10600 372e7dcb9e84ef998026c71323dff460 194 SUPERFAMILY SSF88946 13 115 1.28E-28 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16915 5ad5b85f83d629be6dbc933f6c199194 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 226 2.1E-32 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS16915 5ad5b85f83d629be6dbc933f6c199194 229 Gene3D G3DSA:3.90.226.10 2 224 1.7E-37 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16915 5ad5b85f83d629be6dbc933f6c199194 229 SUPERFAMILY SSF52096 3 224 2.39E-45 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16915 5ad5b85f83d629be6dbc933f6c199194 229 PANTHER PTHR11941 1 228 1.9E-155 T 26-04-2016 PAM18_RS16915 5ad5b85f83d629be6dbc933f6c199194 229 PANTHER PTHR11941:SF50 1 228 1.9E-155 T 26-04-2016 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 Pfam PF01180 Dihydroorotate dehydrogenase 44 335 2.5E-86 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 26-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 Gene3D G3DSA:3.20.20.70 1 338 2.5E-125 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 338 4.3E-131 T 26-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 51.402 T 26-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 SUPERFAMILY SSF51395 1 336 3.3E-106 T 26-04-2016 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 PIRSF PIRSF000164 16 342 5.9E-94 T 26-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 PAM18_RS09815 fab8da6b653b1737b6e0786dc18446b8 342 PANTHER PTHR11938 1 330 6.6E-101 T 26-04-2016 PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 Pfam PF12146 Serine aminopeptidase, S33 27 118 4.0E-12 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 PANTHER PTHR11614 14 274 2.2E-39 T 26-04-2016 PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 PIRSF PIRSF037442 2 287 1.3E-95 T 26-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 SUPERFAMILY SSF53474 3 265 1.53E-26 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 Gene3D G3DSA:3.40.50.1820 9 262 2.2E-27 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16445 df2b1c59e2710edb1f28e2c7de102d45 291 PANTHER PTHR11614:SF82 14 274 2.2E-39 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 9 197 4.12E-63 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 198 378 6.68E-52 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 298 352 2.2E-36 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 210 234 2.2E-36 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 SMART SM00842 10 196 7.4E-107 T 26-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 417 31.729 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 11 193 2.7E-11 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 207 374 4.2E-26 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 157 209 1.3E-27 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 5 83 1.3E-27 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.90.640.10 235 297 1.0E-19 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.1490.110 100 156 1.3E-16 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 PIRSF PIRSF003101 1 417 1.9E-161 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 PANTHER PTHR32432 1 414 1.5E-173 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 7.8E-159 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 PANTHER PTHR32432:SF4 1 414 1.5E-173 T 26-04-2016 PAM18_RS22990 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.6E-32 T 26-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 14 198 2.6E-67 T 26-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 SMART SM00900 105 197 1.4E-36 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 6 199 27.966 T 26-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 Pfam PF04205 FMN-binding domain 105 194 1.6E-17 T 26-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 PANTHER PTHR36118 5 204 2.5E-77 T 26-04-2016 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 PIRSF PIRSF006091 1 210 5.2E-75 T 26-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 PAM18_RS07590 8f715af309c4507f620776a45dc0cb45 214 PANTHER PTHR36118:SF1 5 204 2.5E-77 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 9.7E-66 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 PANTHER PTHR18966 22 246 2.2E-87 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 SUPERFAMILY SSF53850 5 249 2.1E-73 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 SMART SM00062 26 248 8.0E-64 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 114 207 8.6E-23 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 PANTHER PTHR18966:SF152 22 246 2.2E-87 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 208 249 5.7E-47 T 26-04-2016 PAM18_RS26945 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 24 112 5.7E-47 T 26-04-2016 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 SUPERFAMILY SSF46894 135 236 7.94E-24 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 Gene3D G3DSA:3.40.50.2300 6 126 2.3E-40 T 26-04-2016 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 Gene3D G3DSA:1.10.10.10 135 236 5.8E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04270 2536bf73404578115174c73e1916167c 246 PANTHER PTHR26402 5 240 1.4E-97 T 26-04-2016 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 SMART SM00448 5 117 4.2E-41 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 PANTHER PTHR26402:SF528 5 240 1.4E-97 T 26-04-2016 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 SMART SM00862 159 235 2.7E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 SUPERFAMILY SSF52172 6 133 4.41E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04270 2536bf73404578115174c73e1916167c 246 Pfam PF00072 Response regulator receiver domain 7 118 2.8E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS04270 2536bf73404578115174c73e1916167c 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 1.5E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS06395 2953aa57f4ccda3f7068d480836b5a55 288 Pfam PF01904 Protein of unknown function DUF72 23 261 3.6E-52 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS06395 2953aa57f4ccda3f7068d480836b5a55 288 PANTHER PTHR30348:SF3 7 283 2.4E-86 T 26-04-2016 PAM18_RS06395 2953aa57f4ccda3f7068d480836b5a55 288 Gene3D G3DSA:3.20.20.410 5 274 1.8E-69 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS06395 2953aa57f4ccda3f7068d480836b5a55 288 PANTHER PTHR30348 7 283 2.4E-86 T 26-04-2016 PAM18_RS06395 2953aa57f4ccda3f7068d480836b5a55 288 SUPERFAMILY SSF117396 5 265 1.7E-69 T 26-04-2016 IPR002763 Protein of unknown function DUF72 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 7.4E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.6E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 9.6E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 9.6E-9 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 Gene3D G3DSA:3.30.565.10 313 440 3.9E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PANTHER PTHR24423 30 61 2.7E-111 T 26-04-2016 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PANTHER PTHR24423 171 440 2.7E-111 T 26-04-2016 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PANTHER PTHR24423:SF543 30 61 2.7E-111 T 26-04-2016 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 PANTHER PTHR24423:SF543 171 440 2.7E-111 T 26-04-2016 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 Pfam PF00672 HAMP domain 159 222 4.7E-7 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 SUPERFAMILY SSF47384 212 280 4.71E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 SUPERFAMILY SSF55874 296 436 3.8E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11910 e7c96a998327fcd4dc9cddaaab3b9a73 445 SMART SM00387 332 438 6.6E-25 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 Gene3D G3DSA:3.30.160.160 4 49 8.4E-21 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 Gene3D G3DSA:3.30.160.160 55 99 4.1E-19 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 SUPERFAMILY SSF160113 1 54 1.24E-16 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 SUPERFAMILY SSF160113 54 107 1.96E-15 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 107 1.9E-19 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 Pfam PF07411 Domain of unknown function (DUF1508) 10 53 1.4E-18 T 26-04-2016 IPR010879 Domain of unknown function DUF1508 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 PANTHER PTHR40606 2 110 2.9E-67 T 26-04-2016 PAM18_RS01655 d67371e06fd524b651f5d3e09640fe2c 110 PANTHER PTHR40606:SF1 2 110 2.9E-67 T 26-04-2016 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 Pfam PF01592 NifU-like N terminal domain 2 125 5.2E-58 T 26-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 PANTHER PTHR10093:SF3 1 128 1.6E-101 T 26-04-2016 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 Gene3D G3DSA:3.90.1010.10 2 125 4.0E-56 T 26-04-2016 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 PANTHER PTHR10093 1 128 1.6E-101 T 26-04-2016 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.5E-69 T 26-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 PAM18_RS05710 a8afbd032277a9587e7dfab3f481d1bd 128 SUPERFAMILY SSF82649 1 125 3.66E-49 T 26-04-2016 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 608 7.8E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 PIRSF PIRSF003167 17 622 3.2E-198 T 26-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 Gene3D G3DSA:3.30.565.10 500 607 2.2E-9 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 Pfam PF07730 Histidine kinase 411 476 9.3E-18 T 26-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 Pfam PF00672 HAMP domain 174 240 1.0E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 SMART SM00387 517 611 1.8E-9 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 SUPERFAMILY SSF158472 193 242 1.06E-9 T 26-04-2016 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 PANTHER PTHR24421:SF12 362 622 4.3E-138 T 26-04-2016 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 62 85 7.8E-7 T 26-04-2016 IPR029095 NarX-like, N-terminal PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 PANTHER PTHR24421 362 622 4.3E-138 T 26-04-2016 PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 SUPERFAMILY SSF55874 508 608 7.2E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS05400 6de03abeb5d23c5f3965fb16c75d5fe5 622 SMART SM00304 192 244 6.2E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 Gene3D G3DSA:2.140.10.10 20 616 2.3E-145 T 26-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 34 586 1.3E-237 T 26-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 Pfam PF01011 PQQ enzyme repeat 532 568 1.4E-10 T 26-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SUPERFAMILY SSF50998 46 609 2.22E-148 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 282 303 - T 26-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 Pfam PF13360 PQQ-like domain 82 339 1.3E-16 T 26-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 51 79 - T 26-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303 431 623 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303 51 237 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303 262 392 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303:SF2 431 623 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303:SF2 51 237 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 PANTHER PTHR32303:SF2 262 392 2.3E-143 T 26-04-2016 PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 452 517 540.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 147 178 1.4E-5 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 192 235 200.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 527 558 6.8E-7 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 97 129 8.2E-8 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS15700 99800e6e1ceb09790ddaea93449603c9 623 SMART SM00564 368 397 760.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS23510 17df708a0f8e2dc5a9cea504b36e0f3b 299 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 2.5E-48 T 26-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 PAM18_RS23510 17df708a0f8e2dc5a9cea504b36e0f3b 299 Gene3D G3DSA:2.60.120.330 121 222 2.4E-19 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS23510 17df708a0f8e2dc5a9cea504b36e0f3b 299 PANTHER PTHR12366:SF25 1 243 6.3E-179 T 26-04-2016 PAM18_RS23510 17df708a0f8e2dc5a9cea504b36e0f3b 299 SUPERFAMILY SSF51197 98 239 2.75E-19 T 26-04-2016 PAM18_RS23510 17df708a0f8e2dc5a9cea504b36e0f3b 299 PANTHER PTHR12366 1 243 6.3E-179 T 26-04-2016 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88659 92 164 1.61E-13 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 160 4.8E-21 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.1740.10 12 103 1.1E-8 T 26-04-2016 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.10.10 108 160 6.5E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88946 12 98 1.26E-10 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 PANTHER PTHR30173:SF9 12 169 2.1E-36 T 26-04-2016 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 PANTHER PTHR30173 12 169 2.1E-36 T 26-04-2016 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 Pfam PF04542 Sigma-70 region 2 15 80 2.4E-11 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS15135 11e8403b93256486966480a2bf8d087d 169 Pfam PF04545 Sigma-70, region 4 116 163 6.6E-13 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS20495 bfab18e9d7907a868c2664c1d391cab4 491 Pfam PF02646 RmuC family 174 470 3.9E-107 T 26-04-2016 IPR003798 DNA recombination RmuC PAM18_RS20495 bfab18e9d7907a868c2664c1d391cab4 491 PANTHER PTHR30563 19 491 1.1E-137 T 26-04-2016 PAM18_RS22030 4c37fb8a69231fdff38d63e619116a84 116 Pfam PF10734 Protein of unknown function (DUF2523) 30 109 6.2E-10 T 26-04-2016 IPR019670 Protein of unkown function DUF2523 PAM18_RS24400 4c37fb8a69231fdff38d63e619116a84 116 Pfam PF10734 Protein of unknown function (DUF2523) 30 109 6.2E-10 T 26-04-2016 IPR019670 Protein of unkown function DUF2523 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.3E-171 T 26-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 PANTHER PTHR30108:SF1 1 488 7.9E-271 T 26-04-2016 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:3.40.1670.10 337 453 1.3E-55 T 26-04-2016 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF143968 323 487 2.35E-66 T 26-04-2016 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.0E-173 T 26-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF50475 3 322 3.92E-126 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 PANTHER PTHR30108 1 488 7.9E-271 T 26-04-2016 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:1.20.5.570 455 487 1.1E-16 T 26-04-2016 PAM18_RS27375 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.005 T 26-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 SUPERFAMILY SSF74653 107 114 8.5E-20 T 26-04-2016 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 SUPERFAMILY SSF74653 185 292 8.5E-20 T 26-04-2016 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 PANTHER PTHR33446 1 278 4.2E-79 T 26-04-2016 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 Gene3D G3DSA:3.30.1150.10 186 292 1.0E-22 T 26-04-2016 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 211 288 2.9E-16 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 213 289 2.5E-14 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS02055 da2cad032aa8c2331dd4bc7f56d6337a 297 PANTHER PTHR33446:SF2 1 278 4.2E-79 T 26-04-2016 PAM18_RS15780 6c3af658e6503c1f01e3b44f031ff245 123 SUPERFAMILY SSF55331 2 122 6.5E-30 T 26-04-2016 IPR014347 Tautomerase/MIF superfamily PAM18_RS15780 6c3af658e6503c1f01e3b44f031ff245 123 Gene3D G3DSA:3.30.429.10 1 122 4.7E-37 T 26-04-2016 PAM18_RS15780 6c3af658e6503c1f01e3b44f031ff245 123 PANTHER PTHR37950 2 123 9.7E-43 T 26-04-2016 PAM18_RS15780 6c3af658e6503c1f01e3b44f031ff245 123 PANTHER PTHR37950:SF1 2 123 9.7E-43 T 26-04-2016 PAM18_RS15780 6c3af658e6503c1f01e3b44f031ff245 123 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 117 2.1E-5 T 26-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 PANTHER PTHR10992:SF726 1 166 1.2E-176 T 26-04-2016 PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 PANTHER PTHR10992:SF726 184 317 1.2E-176 T 26-04-2016 PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 Gene3D G3DSA:3.40.50.1820 30 315 5.9E-61 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 SUPERFAMILY SSF53474 31 317 1.43E-63 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 PANTHER PTHR10992 1 166 1.2E-176 T 26-04-2016 PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 PANTHER PTHR10992 184 317 1.2E-176 T 26-04-2016 PAM18_RS10410 d2256eeddb7659532d0b2ca8b25a1dce 319 Pfam PF12697 Alpha/beta hydrolase family 57 302 2.4E-18 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 SUPERFAMILY SSF52540 152 346 2.25E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 2 948 69.203 T 26-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799 874 948 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799 781 822 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799 388 676 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799 163 351 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Pfam PF00176 SNF2 family N-terminal domain 173 358 2.4E-14 T 26-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 SMART SM00487 149 346 5.0E-19 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Gene3D G3DSA:3.40.50.300 155 343 1.1E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 SUPERFAMILY SSF52540 463 630 2.92E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 SUPERFAMILY SSF52540 270 334 2.92E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Gene3D G3DSA:3.40.50.300 466 612 2.4E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Pfam PF12137 RNA polymerase recycling family C-terminal 588 946 2.6E-139 T 26-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 SMART SM00490 500 584 1.2E-15 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799:SF610 874 948 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799:SF610 781 822 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799:SF610 388 676 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 PANTHER PTHR10799:SF610 163 351 0.0 T 26-04-2016 PAM18_RS08510 caf8e7762853d7e23d16c5accffa8a95 948 Pfam PF00271 Helicase conserved C-terminal domain 475 584 4.5E-13 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 364 8.6E-185 T 26-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 SUPERFAMILY SSF55909 5 364 4.46E-147 T 26-04-2016 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 PANTHER PTHR31377 7 368 9.7E-201 T 26-04-2016 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 Gene3D G3DSA:3.75.10.10 5 364 4.2E-158 T 26-04-2016 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 363 1.3E-129 T 26-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 PANTHER PTHR31377:SF2 7 368 9.7E-201 T 26-04-2016 PAM18_RS01460 199c0be3358c9b219da7b720fc8033e8 368 Hamap MF_01841 Agmatine deiminase [aguA]. 6 364 63.145 T 26-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 PANTHER PTHR30055 2 203 1.7E-71 T 26-04-2016 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 PANTHER PTHR30055:SF30 2 203 1.7E-71 T 26-04-2016 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 Gene3D G3DSA:1.10.357.10 4 170 2.0E-27 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 3.2E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 Pfam PF13972 Bacterial transcriptional repressor 60 203 2.5E-46 T 26-04-2016 IPR025722 Bacterial transcriptional repressor TetR PAM18_RS01850 73c3fc670ed040a57ace31b147910e8c 215 SUPERFAMILY SSF46689 7 68 2.19E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 PANTHER PTHR30177 1 283 4.6E-124 T 26-04-2016 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 Gene3D G3DSA:3.40.190.10 26 110 5.9E-40 T 26-04-2016 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 Gene3D G3DSA:3.40.190.10 232 294 5.9E-40 T 26-04-2016 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 305 2.4E-127 T 26-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 SUPERFAMILY SSF53850 22 295 2.35E-81 T 26-04-2016 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 PANTHER PTHR30177:SF0 1 283 4.6E-124 T 26-04-2016 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 279 9.9E-56 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS00150 c50013b63e15e575a212e94b263814c3 307 Gene3D G3DSA:3.40.190.100 115 231 8.9E-23 T 26-04-2016 PAM18_RS15260 0aadb3afb70d854487515ba6a2e6e397 574 Pfam PF16861 Carbamoyltransferase C-terminus 390 559 1.8E-53 T 26-04-2016 IPR031730 Carbamoyltransferase, C-terminal PAM18_RS15260 0aadb3afb70d854487515ba6a2e6e397 574 PANTHER PTHR34847 1 574 9.4E-124 T 26-04-2016 PAM18_RS15260 0aadb3afb70d854487515ba6a2e6e397 574 SUPERFAMILY SSF53067 131 340 7.99E-15 T 26-04-2016 PAM18_RS15260 0aadb3afb70d854487515ba6a2e6e397 574 SUPERFAMILY SSF53067 13 78 7.99E-15 T 26-04-2016 PAM18_RS15260 0aadb3afb70d854487515ba6a2e6e397 574 Pfam PF02543 Carbamoyltransferase N-terminus 4 337 9.6E-51 T 26-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SMART SM00091 433 500 1.5E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 2.9E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 760 2.9E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 741 2.9E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Gene3D G3DSA:1.10.287.130 538 604 1.5E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Pfam PF05226 CHASE2 domain 35 323 1.7E-54 T 26-04-2016 IPR007890 CHASE2 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PANTHER PTHR24423 431 766 5.2E-78 T 26-04-2016 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PANTHER PTHR24423 1 16 5.2E-78 T 26-04-2016 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Gene3D G3DSA:3.30.450.20 429 499 1.3E-6 T 26-04-2016 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Pfam PF08448 PAS fold 439 540 2.6E-6 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 654 761 7.5E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SMART SM01080 43 326 9.8E-88 T 26-04-2016 IPR007890 CHASE2 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SUPERFAMILY SSF47384 537 608 8.24E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PANTHER PTHR24423:SF394 431 766 5.2E-78 T 26-04-2016 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PANTHER PTHR24423:SF394 1 16 5.2E-78 T 26-04-2016 PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 Gene3D G3DSA:3.30.565.10 615 761 4.0E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 PIRSF PIRSF037347 2 766 1.0E-190 T 26-04-2016 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SMART SM00387 653 763 1.1E-30 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SUPERFAMILY SSF55785 418 535 2.86E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS04600 640dfc6b5db184af4bb112da3825a27d 766 SUPERFAMILY SSF55874 603 762 4.85E-39 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.3E-13 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.3E-13 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.3E-13 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 260 8.8E-89 T 26-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 PANTHER PTHR21581:SF8 1 299 8.7E-181 T 26-04-2016 PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 SUPERFAMILY SSF56601 8 276 2.88E-60 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 Gene3D G3DSA:3.40.710.10 10 276 3.6E-66 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21300 0350184aaaad2dc4f42f93c3ffa2af56 310 PANTHER PTHR21581 1 299 8.7E-181 T 26-04-2016 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 Gene3D G3DSA:1.20.1600.10 18 427 2.0E-61 T 26-04-2016 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 PANTHER PTHR30026:SF3 1 450 4.1E-127 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 PANTHER PTHR30026 1 450 4.1E-127 T 26-04-2016 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 SUPERFAMILY SSF56954 22 437 4.97E-79 T 26-04-2016 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 437 2.8E-113 T 26-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 Pfam PF02321 Outer membrane efflux protein 24 212 2.6E-19 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS08025 7e058423833029e32c29524e5eb71fa4 451 Pfam PF02321 Outer membrane efflux protein 239 423 3.0E-28 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 3.3E-77 T 26-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 Gene3D G3DSA:3.20.20.70 1 240 2.3E-87 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 SUPERFAMILY SSF51366 1 239 2.28E-75 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 PANTHER PTHR21235:SF15 1 242 4.0E-107 T 26-04-2016 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.569 T 26-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 Pfam PF00977 Histidine biosynthesis protein 3 231 1.3E-77 T 26-04-2016 IPR006062 Histidine biosynthesis GO:0000105 PAM18_RS26870 502654a1531a733cfcde290c6b20c601 245 PANTHER PTHR21235 1 242 4.0E-107 T 26-04-2016 PAM18_RS10325 3536b627110c00a26d72cebc04b77b8f 398 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.776 T 26-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS10325 3536b627110c00a26d72cebc04b77b8f 398 PANTHER PTHR37480 2 398 1.7E-258 T 26-04-2016 PAM18_RS10325 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.5E-37 T 26-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS10325 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.8E-108 T 26-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS10325 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.8E-29 T 26-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 Pfam PF02675 S-adenosylmethionine decarboxylase 36 170 1.2E-31 T 26-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 SUPERFAMILY SSF56276 113 174 4.71E-25 T 26-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 SUPERFAMILY SSF56276 44 85 4.71E-25 T 26-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 4 262 2.7E-147 T 26-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 Gene3D G3DSA:3.60.90.10 34 187 8.6E-48 T 26-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 PANTHER PTHR33866:SF1 16 85 1.4E-163 T 26-04-2016 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 PANTHER PTHR33866 113 264 1.4E-163 T 26-04-2016 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 PANTHER PTHR33866 16 85 1.4E-163 T 26-04-2016 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 168.207 T 26-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 PIRSF PIRSF001356 1 264 5.6E-150 T 26-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS03220 3f160cfc4b96b8c8251ee0b41a820d8e 264 PANTHER PTHR33866:SF1 113 264 1.4E-163 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PIRSF PIRSF019574 1 367 2.2E-117 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 Pfam PF13416 Bacterial extracellular solute-binding protein 45 319 4.4E-27 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 149 315 5.4E-63 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PANTHER PTHR30222:SF11 1 366 2.0E-221 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 SUPERFAMILY SSF53850 29 366 9.32E-90 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PANTHER PTHR30222 1 366 2.0E-221 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 30 148 6.2E-22 T 26-04-2016 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS12330 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 1.2E-51 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS10400 b363fb13500ccc6918177a21afd0a6e8 193 PANTHER PTHR30529:SF5 1 192 3.0E-58 T 26-04-2016 PAM18_RS10400 b363fb13500ccc6918177a21afd0a6e8 193 SUPERFAMILY SSF81342 5 190 4.63E-22 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS10400 b363fb13500ccc6918177a21afd0a6e8 193 PANTHER PTHR30529 1 192 3.0E-58 T 26-04-2016 PAM18_RS10400 b363fb13500ccc6918177a21afd0a6e8 193 Pfam PF01292 Prokaryotic cytochrome b561 7 188 4.6E-25 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.20 96 167 1.1E-19 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF00023 Ankyrin repeat 114 145 3.6E-4 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 SUPERFAMILY SSF48403 23 167 3.59E-37 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 PANTHER PTHR24188:SF32 24 167 1.9E-49 T 26-04-2016 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 PANTHER PTHR24188 24 167 1.9E-49 T 26-04-2016 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF12796 Ankyrin repeats (3 copies) 24 108 1.3E-11 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.20 10 95 4.7E-22 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 81 110 0.52 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 48 77 3.3E-4 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS08620 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 114 143 0.021 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 PANTHER PTHR11552:SF92 7 530 4.7E-174 T 26-04-2016 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Pfam PF05199 GMC oxidoreductase 385 518 2.1E-21 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 PANTHER PTHR11552 7 530 4.7E-174 T 26-04-2016 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Pfam PF00732 GMC oxidoreductase 32 296 1.6E-49 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 SUPERFAMILY SSF51905 465 528 2.45E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 SUPERFAMILY SSF51905 16 295 2.45E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Gene3D G3DSA:3.50.50.60 399 412 3.2E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Gene3D G3DSA:3.50.50.60 29 148 3.2E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Gene3D G3DSA:3.50.50.60 193 297 3.2E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01835 d9491a1b41614cee8c21f9e0aaf2cd15 531 Gene3D G3DSA:3.50.50.60 459 527 3.2E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 SUPERFAMILY SSF53474 46 218 1.03E-29 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 SUPERFAMILY SSF53474 263 296 1.03E-29 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 Gene3D G3DSA:3.40.50.1820 11 320 3.1E-52 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 PANTHER PTHR10655:SF33 8 222 6.5E-65 T 26-04-2016 PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 Pfam PF10503 Esterase PHB depolymerase 55 181 1.1E-15 T 26-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 PAM18_RS02750 de1d151a6a422825c4f52568d6f3e8a9 322 PANTHER PTHR10655 8 222 6.5E-65 T 26-04-2016 PAM18_RS05515 4d850dd100758ff740a19cef2b1d7e43 250 Pfam PF01988 VIT family 32 242 1.8E-57 T 26-04-2016 IPR008217 Ccc1 family PAM18_RS05515 4d850dd100758ff740a19cef2b1d7e43 250 PANTHER PTHR31851 32 245 2.0E-59 T 26-04-2016 PAM18_RS00065 e5b6df45971b0fd34e6e7357ceb394f6 217 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 202 5.9E-56 T 26-04-2016 IPR003744 Protein of unknown function DUF165 PAM18_RS00065 e5b6df45971b0fd34e6e7357ceb394f6 217 PANTHER PTHR34300 1 216 5.2E-125 T 26-04-2016 PAM18_RS00065 e5b6df45971b0fd34e6e7357ceb394f6 217 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.2E-35 T 26-04-2016 IPR003744 Protein of unknown function DUF165 PAM18_RS00065 e5b6df45971b0fd34e6e7357ceb394f6 217 PANTHER PTHR34300:SF1 1 216 5.2E-125 T 26-04-2016 PAM18_RS28385 351be57844a7201dfde571ae83426905 224 Pfam PF13302 Acetyltransferase (GNAT) domain 46 165 1.8E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS28385 351be57844a7201dfde571ae83426905 224 SUPERFAMILY SSF55729 15 189 3.74E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS28385 351be57844a7201dfde571ae83426905 224 PANTHER PTHR13256 6 212 3.0E-87 T 26-04-2016 PAM18_RS28385 351be57844a7201dfde571ae83426905 224 PANTHER PTHR13256:SF22 6 212 3.0E-87 T 26-04-2016 PAM18_RS28385 351be57844a7201dfde571ae83426905 224 Gene3D G3DSA:3.40.630.30 6 205 8.2E-58 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 PANTHER PTHR10204:SF16 1 213 5.1E-124 T 26-04-2016 PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 Gene3D G3DSA:3.40.50.360 1 199 3.0E-69 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 PANTHER PTHR10204 1 213 5.1E-124 T 26-04-2016 PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 SUPERFAMILY SSF52218 1 199 3.67E-58 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 Pfam PF02525 Flavodoxin-like fold 3 198 2.8E-49 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS08965 a277d51826afe704fc823b42547c885d 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.655 T 26-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 PAM18_RS11970 50059b43a6a948912fea92a729cf202f 166 PANTHER PTHR33269 1 166 2.9E-90 T 26-04-2016 PAM18_RS11970 50059b43a6a948912fea92a729cf202f 166 PANTHER PTHR33269:SF2 1 166 2.9E-90 T 26-04-2016 PAM18_RS11970 50059b43a6a948912fea92a729cf202f 166 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 159 4.2E-33 T 26-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 SUPERFAMILY SSF47203 241 396 3.54E-37 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 Gene3D G3DSA:1.10.540.10 2 126 9.7E-9 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 Gene3D G3DSA:1.20.140.10 243 396 4.6E-51 T 26-04-2016 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 SUPERFAMILY SSF56645 8 254 4.19E-47 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 Gene3D G3DSA:2.40.110.10 130 235 7.3E-38 T 26-04-2016 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.9E-23 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 394 7.2E-41 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 PANTHER PTHR10909 10 54 4.1E-88 T 26-04-2016 PAM18_RS26130 e73f71a5c91a66251620cf72d113e00b 402 PANTHER PTHR10909 73 402 4.1E-88 T 26-04-2016 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 SUPERFAMILY SSF46894 251 321 3.16E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 279 1.7E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 307 1.7E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 279 295 1.7E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 SMART SM00421 262 319 6.3E-16 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 Gene3D G3DSA:1.10.10.10 258 320 3.1E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05925 3c7bf98f54850f73a932b500a4114898 325 Pfam PF00196 Bacterial regulatory proteins, luxR family 264 318 5.8E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF53732 379 858 4.71E-148 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.20.19.10 162 360 1.2E-90 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF11791 Aconitate B N-terminal domain 4 156 4.0E-67 T 26-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 PANTHER PTHR11670:SF39 305 861 0.0 T 26-04-2016 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 857 0.0 T 26-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.40.1060.10 523 685 3.0E-85 T 26-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 687 867 3.3E-53 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 PANTHER PTHR11670 305 861 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF74778 2 160 1.06E-68 T 26-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF00330 Aconitase family (aconitate hydratase) 475 821 2.8E-40 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 405 522 4.8E-64 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF52016 161 372 3.57E-70 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 PIRSF PIRSF036687 1 862 0.0 T 26-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PAM18_RS16715 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.3E-95 T 26-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 198 4.0E-13 T 26-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.8E-12 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.8E-12 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.6E-18 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 Gene3D G3DSA:1.10.357.10 60 201 4.9E-18 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 Gene3D G3DSA:1.10.10.60 1 59 1.0E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF48498 83 202 7.56E-12 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF46689 1 65 7.98E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 PANTHER PTHR30055 1 206 1.2E-59 T 26-04-2016 PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAM18_RS07270 2a4404b3476d6b758615ab8b9c7cfbe0 212 PANTHER PTHR30055:SF66 1 206 1.2E-59 T 26-04-2016 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 SUPERFAMILY SSF52540 325 560 1.68E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 PANTHER PTHR24222:SF22 1 559 4.9E-215 T 26-04-2016 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 Gene3D G3DSA:3.40.50.300 330 553 2.5E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 Gene3D G3DSA:1.20.1560.10 21 317 4.9E-14 T 26-04-2016 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 PANTHER PTHR24222 1 559 4.9E-215 T 26-04-2016 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 SUPERFAMILY SSF90123 16 318 6.93E-26 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 Pfam PF00005 ABC transporter 344 493 8.6E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS03660 80f47b09dd9eb135b4371e5b234a3f1c 574 SMART SM00382 353 537 2.5E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS02610 cee956fe6fec56d09849cca8568badc2 392 SUPERFAMILY SSF51004 26 390 3.53E-75 T 26-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAM18_RS02610 cee956fe6fec56d09849cca8568badc2 392 Gene3D G3DSA:2.140.10.20 131 383 2.9E-42 T 26-04-2016 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain PAM18_RS02610 cee956fe6fec56d09849cca8568badc2 392 PANTHER PTHR13833 65 245 5.8E-17 T 26-04-2016 PAM18_RS02610 cee956fe6fec56d09849cca8568badc2 392 Gene3D G3DSA:2.130.10.10 36 130 5.6E-4 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS02610 cee956fe6fec56d09849cca8568badc2 392 Pfam PF02239 Cytochrome D1 heme domain 25 386 2.8E-147 T 26-04-2016 PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 111 1.1E-30 T 26-04-2016 IPR006504 Transcriptional regulator Spx/MgsR PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 PANTHER PTHR30041:SF3 1 114 4.5E-45 T 26-04-2016 PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 Gene3D G3DSA:3.40.30.10 4 114 3.9E-44 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 SUPERFAMILY SSF52833 3 114 3.42E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 PANTHER PTHR30041 1 114 4.5E-45 T 26-04-2016 PAM18_RS06490 b910869a8ca3406bf885b7fa240ce4a2 115 Pfam PF03960 ArsC family 6 112 9.1E-19 T 26-04-2016 IPR006660 Arsenate reductase-like PAM18_RS10570 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Gene3D G3DSA:3.40.190.10 14 152 3.1E-12 T 26-04-2016 PAM18_RS10570 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SMART SM00062 31 262 0.0084 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS10570 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 248 7.6E-17 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS10570 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SUPERFAMILY SSF53850 34 252 1.18E-30 T 26-04-2016 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 PIRSF PIRSF001456 3 359 7.2E-140 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 PANTHER PTHR21085 2 359 1.6E-213 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 37.167 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 SUPERFAMILY SSF103263 4 354 2.49E-148 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 2.6E-140 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 Gene3D G3DSA:3.60.150.10 9 352 6.7E-157 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 Pfam PF01264 Chorismate synthase 10 344 1.9E-139 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS17255 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 PANTHER PTHR30352:SF4 6 223 6.1E-61 T 26-04-2016 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 Gene3D G3DSA:3.20.20.70 22 223 2.0E-19 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 7 194 1.4E-72 T 26-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 Pfam PF04055 Radical SAM superfamily 27 157 2.9E-14 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 PANTHER PTHR30352 6 223 6.1E-61 T 26-04-2016 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 SUPERFAMILY SSF102114 18 196 4.32E-20 T 26-04-2016 PAM18_RS16000 ffddfdd415e5fc6e53e75411749c221e 232 Pfam PF13353 4Fe-4S single cluster domain 19 95 6.0E-9 T 26-04-2016 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 Pfam PF01967 MoaC family 13 147 8.3E-56 T 26-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 155 35.449 T 26-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 149 6.4E-70 T 26-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 SUPERFAMILY SSF55040 9 152 3.79E-60 T 26-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 Gene3D G3DSA:3.30.70.640 2 155 1.2E-68 T 26-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 PAM18_RS05190 5b6267eb0e023d157e67737999c14635 160 PANTHER PTHR22960 2 155 6.9E-101 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 SUPERFAMILY SSF52402 390 490 1.14E-17 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 SUPERFAMILY SSF52402 211 340 1.14E-17 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Pfam PF13537 Glutamine amidotransferase domain 97 145 1.7E-13 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 SUPERFAMILY SSF56235 1 193 9.44E-28 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 PANTHER PTHR11772:SF11 2 344 4.2E-107 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 PANTHER PTHR11772:SF11 376 428 4.2E-107 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Gene3D G3DSA:3.60.20.10 97 193 8.4E-21 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Gene3D G3DSA:3.60.20.10 1 74 1.2E-8 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 PANTHER PTHR11772 2 344 4.2E-107 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 PANTHER PTHR11772 376 428 4.2E-107 T 26-04-2016 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Pfam PF00733 Asparagine synthase 214 525 2.7E-45 T 26-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Gene3D G3DSA:3.40.50.620 210 346 1.4E-17 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS19520 5566c1b6fa704fe3ee89040a0057bd76 532 Gene3D G3DSA:3.40.50.620 397 487 1.4E-17 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS22440 888a961a2c25e7494b46a3a467b26ed6 294 PANTHER PTHR35007:SF1 15 292 9.0E-94 T 26-04-2016 PAM18_RS22440 888a961a2c25e7494b46a3a467b26ed6 294 PANTHER PTHR35007 15 292 9.0E-94 T 26-04-2016 PAM18_RS22440 888a961a2c25e7494b46a3a467b26ed6 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 253 4.6E-16 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Gene3D G3DSA:3.40.50.300 2 253 6.7E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 PANTHER PTHR24220:SF574 7 402 4.3E-189 T 26-04-2016 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 SUPERFAMILY SSF52540 4 254 2.13E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Gene3D G3DSA:3.40.50.300 268 518 1.1E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 SMART SM00382 30 228 2.0E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 SMART SM00382 303 494 1.5E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Pfam PF00005 ABC transporter 295 445 5.0E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Pfam PF00005 ABC transporter 22 178 6.5E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 255 2.1E-4 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 496 527 1.8E-6 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 SUPERFAMILY SSF52540 270 516 6.71E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 PANTHER PTHR24220 7 402 4.3E-189 T 26-04-2016 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS15300 7cd1faa6cac3ba533152f2eee9cd3d73 536 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 PIRSF PIRSF000524 1 370 7.5E-62 T 26-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 PANTHER PTHR21152:SF21 1 368 3.2E-126 T 26-04-2016 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 Gene3D G3DSA:3.40.640.10 33 254 7.7E-48 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 9 362 6.8E-168 T 26-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 PANTHER PTHR21152 1 368 3.2E-126 T 26-04-2016 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 364 2.6E-184 T 26-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 207.87 T 26-04-2016 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 SUPERFAMILY SSF53383 8 367 6.53E-84 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 Pfam PF00266 Aminotransferase class-V 37 304 1.3E-19 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS18395 30030b6fac1cbb03c58f9cda83016c5c 371 Gene3D G3DSA:3.90.1150.10 255 361 3.6E-41 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 SUPERFAMILY SSF46626 21 103 2.07E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 Gene3D G3DSA:1.10.760.10 140 210 9.5E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 Pfam PF00034 Cytochrome c 141 210 8.0E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 PANTHER PTHR33751:SF2 1 217 5.6E-151 T 26-04-2016 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 29 102 4.0E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 PANTHER PTHR33751 1 217 5.6E-151 T 26-04-2016 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 SUPERFAMILY SSF46626 125 210 7.78E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 PIRSF PIRSF000005 1 212 2.2E-65 T 26-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PAM18_RS13170 9b771dde1347cc730e297c48c4730f7c 217 Gene3D G3DSA:1.10.760.10 24 139 5.9E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 PANTHER PTHR32071:SF15 17 356 3.0E-151 T 26-04-2016 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 Gene3D G3DSA:3.40.50.300 21 192 7.6E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 PANTHER PTHR32071 17 356 3.0E-151 T 26-04-2016 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 SUPERFAMILY SSF52540 22 262 6.33E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 Gene3D G3DSA:1.10.10.60 281 345 5.3E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 Gene3D G3DSA:1.10.8.60 193 264 5.7E-22 T 26-04-2016 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 SMART SM00382 41 184 8.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 SUPERFAMILY SSF46689 234 344 2.2E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13795 922a018aceaa643aea8146b803b2c6cb 361 Pfam PF00158 Sigma-54 interaction domain 22 188 4.5E-68 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 PANTHER PTHR11260 6 205 6.2E-96 T 26-04-2016 PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 SUPERFAMILY SSF52833 5 108 2.88E-14 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 SUPERFAMILY SSF47616 77 205 2.09E-17 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 Gene3D G3DSA:1.20.1050.10 96 204 7.9E-10 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 86 6.1E-18 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 Gene3D G3DSA:3.40.30.10 5 95 1.4E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 193 3.7E-6 T 26-04-2016 PAM18_RS02365 d2d139ae7bd5166456b0eb8b1b2349b4 206 PANTHER PTHR11260:SF256 6 205 6.2E-96 T 26-04-2016 PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 Gene3D G3DSA:3.40.50.300 212 371 8.9E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 PANTHER PTHR24031 1 374 1.7E-168 T 26-04-2016 PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 Gene3D G3DSA:3.40.50.300 1 211 4.9E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 SMART SM00487 20 222 2.2E-62 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.5E-48 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 SMART SM00490 258 339 8.0E-30 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 PANTHER PTHR24031:SF261 1 374 1.7E-168 T 26-04-2016 PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 SUPERFAMILY SSF52540 74 359 1.53E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05030 663d45088a4d414da0d4940c9677a64b 449 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.5E-27 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 PANTHER PTHR13932:SF7 10 384 2.9E-215 T 26-04-2016 PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 PANTHER PTHR13932 10 384 2.9E-215 T 26-04-2016 PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 Pfam PF06969 HemN C-terminal domain 310 372 4.9E-13 T 26-04-2016 IPR010723 HemN, C-terminal PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 SMART SM00729 11 227 4.3E-57 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 Gene3D G3DSA:3.80.30.20 13 244 2.5E-33 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 13 346 3.4E-118 T 26-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 SUPERFAMILY SSF102114 10 383 2.35E-107 T 26-04-2016 PAM18_RS01950 00828f3823bb0a53ea6ceb210aea8f11 384 Pfam PF04055 Radical SAM superfamily 16 182 4.9E-20 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 SUPERFAMILY SSF52518 347 526 2.4E-67 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Gene3D G3DSA:3.40.50.970 326 531 7.2E-78 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Gene3D G3DSA:3.40.50.920 538 664 8.4E-48 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 SUPERFAMILY SSF52518 5 320 1.23E-121 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 8.2E-16 T 26-04-2016 IPR033248 Transketolase, C-terminal domain PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 525 1.2E-45 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 SUPERFAMILY SSF52922 533 664 1.83E-42 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 333 9.6E-166 T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 26-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 SMART SM00861 354 525 6.3E-70 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 PANTHER PTHR11624:SF1 1 309 0.0 T 26-04-2016 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 PANTHER PTHR11624:SF1 328 664 0.0 T 26-04-2016 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 Gene3D G3DSA:3.40.50.970 5 321 2.2E-133 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 26-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 PANTHER PTHR11624 1 309 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS02775 997c8134e30983f8da2ff3a371d74bc3 665 PANTHER PTHR11624 328 664 0.0 T 26-04-2016 IPR033247 Transketolase family PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Gene3D G3DSA:3.90.78.10 240 338 2.2E-41 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Gene3D G3DSA:3.30.43.10 9 72 1.1E-23 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Pfam PF01565 FAD binding domain 24 156 4.5E-26 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 87.857 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 335 3.4E-71 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 SUPERFAMILY SSF56194 212 338 2.88E-46 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 PANTHER PTHR21071 3 338 3.9E-171 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 SUPERFAMILY SSF56176 10 197 4.44E-47 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Gene3D G3DSA:3.30.465.10 82 239 5.3E-53 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 PANTHER PTHR21071:SF6 3 338 3.9E-171 T 26-04-2016 PAM18_RS10190 6beb82cc2e511740f2aa349a5ac6a44a 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 216 338 7.3E-33 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS09515 971a602e306189c5ec6cdabf45cd9318 219 SUPERFAMILY SSF110997 143 215 2.09E-18 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS09515 971a602e306189c5ec6cdabf45cd9318 219 Gene3D G3DSA:3.30.70.1070 139 216 2.6E-23 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS09515 971a602e306189c5ec6cdabf45cd9318 219 Pfam PF05036 Sporulation related domain 143 213 1.3E-17 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS09515 971a602e306189c5ec6cdabf45cd9318 219 PANTHER PTHR38687 5 219 1.3E-70 T 26-04-2016 PAM18_RS09515 971a602e306189c5ec6cdabf45cd9318 219 PANTHER PTHR38687:SF1 5 219 1.3E-70 T 26-04-2016 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 PANTHER PTHR30061:SF3 5 434 6.0E-165 T 26-04-2016 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 SUPERFAMILY SSF53850 25 408 5.69E-73 T 26-04-2016 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 153 342 7.4E-47 T 26-04-2016 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 PANTHER PTHR30061 5 434 6.0E-165 T 26-04-2016 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 Pfam PF01547 Bacterial extracellular solute-binding protein 46 327 3.3E-47 T 26-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 PAM18_RS13900 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 24 152 1.3E-17 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3410.10 245 351 3.3E-35 T 26-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3210.10 149 244 3.2E-65 T 26-04-2016 IPR006674 HD domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3210.10 1 112 3.2E-65 T 26-04-2016 IPR006674 HD domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 SUPERFAMILY SSF109604 21 187 2.93E-64 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 SUPERFAMILY SSF109604 224 434 2.93E-64 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 PANTHER PTHR11373:SF29 1 132 4.1E-85 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 PANTHER PTHR11373:SF29 148 185 4.1E-85 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 PANTHER PTHR11373 1 132 4.1E-85 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 PANTHER PTHR11373 148 185 4.1E-85 T 26-04-2016 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Pfam PF01966 HD domain 61 125 8.9E-9 T 26-04-2016 IPR006674 HD domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.7E-98 T 26-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 SMART SM00471 57 255 7.6E-10 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3550.10 352 440 3.1E-34 T 26-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3550.10 113 146 3.1E-34 T 26-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PAM18_RS09850 26e9713ec4adde923c798dd755da30f3 443 Hamap MF_01213 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 440 52.737 T 26-04-2016 IPR023024 Deoxyguanosinetriphosphate triphosphohydrolase, type 3 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 6.4E-11 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 284 292 6.4E-11 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 6.4E-11 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 134 6.4E-11 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 6.4E-11 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 Gene3D G3DSA:3.10.20.30 2 78 3.8E-16 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 Gene3D G3DSA:3.40.50.80 191 317 6.3E-29 T 26-04-2016 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 SUPERFAMILY SSF63380 92 186 8.9E-14 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 Pfam PF00175 Oxidoreductase NAD-binding domain 197 296 1.7E-11 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PANTHER PTHR19370 31 316 1.7E-88 T 26-04-2016 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 SUPERFAMILY SSF52343 192 317 3.93E-29 T 26-04-2016 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 68 2.8E-7 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 PANTHER PTHR19370:SF68 31 316 1.7E-88 T 26-04-2016 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 SUPERFAMILY SSF54292 3 79 5.12E-16 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS27370 f394c6fe8f116dcfaad510ec4ac36164 322 Gene3D G3DSA:2.40.30.10 92 186 8.7E-17 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 Pfam PF07722 Peptidase C26 5 223 1.1E-76 T 26-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 SUPERFAMILY SSF52317 4 246 2.66E-39 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922:SF18 156 246 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922:SF18 26 69 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922:SF18 85 140 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922 156 246 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922 26 69 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 PANTHER PTHR11922 85 140 3.1E-59 T 26-04-2016 PAM18_RS01485 dd2f9049112470e8bfcef9f99da85788 250 Gene3D G3DSA:3.40.50.880 5 247 2.1E-49 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 Gene3D G3DSA:3.30.700.10 1 60 1.5E-5 T 26-04-2016 PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 PANTHER PTHR30093 1 128 2.3E-66 T 26-04-2016 PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 Pfam PF08334 Type II secretion system (T2SS), protein G 17 126 1.1E-44 T 26-04-2016 IPR013545 Type II secretion system protein G PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 PANTHER PTHR30093:SF9 1 128 2.3E-66 T 26-04-2016 PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 1 127 1.0E-60 T 26-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 PAM18_RS09560 3384b4a59ccea288caccc91505a956a6 128 SUPERFAMILY SSF54523 21 127 3.51E-40 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 3.7E-17 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 186 217 4.6E-35 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 26 153 4.6E-35 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.30.300.30 458 558 3.9E-30 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 SUPERFAMILY SSF56801 18 557 3.01E-149 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 PANTHER PTHR24096 25 161 2.2E-178 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 PANTHER PTHR24096 177 554 2.2E-178 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 218 379 4.5E-41 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:2.30.38.10 380 452 2.3E-28 T 26-04-2016 PAM18_RS08565 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF00501 AMP-binding enzyme 31 461 1.5E-107 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS28135 14db7758e0e66ac100f6b2e6b471b531 355 PANTHER PTHR30106:SF2 13 349 2.3E-138 T 26-04-2016 PAM18_RS28135 14db7758e0e66ac100f6b2e6b471b531 355 PANTHER PTHR30106 13 349 2.3E-138 T 26-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PAM18_RS28135 14db7758e0e66ac100f6b2e6b471b531 355 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 19 350 2.0E-115 T 26-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 PAM18_RS28135 14db7758e0e66ac100f6b2e6b471b531 355 Pfam PF03601 Conserved hypothetical protein 698 21 335 1.0E-115 T 26-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.0E-10 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 Gene3D G3DSA:1.10.10.10 5 77 6.2E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 Gene3D G3DSA:3.40.190.10 169 254 6.1E-10 T 26-04-2016 PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 SUPERFAMILY SSF46785 3 78 7.07E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 SUPERFAMILY SSF53850 140 296 1.16E-18 T 26-04-2016 PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 PANTHER PTHR30579:SF2 1 306 8.6E-117 T 26-04-2016 PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 Pfam PF03466 LysR substrate binding domain 139 292 5.8E-14 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS20650 0288135a3e93da525cc296a15f943ca3 332 PANTHER PTHR30579 1 306 8.6E-117 T 26-04-2016 PAM18_RS17875 743120926fdaad621cad5b298a609696 210 SUPERFAMILY SSF53474 4 182 7.82E-27 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17875 743120926fdaad621cad5b298a609696 210 PANTHER PTHR13136 3 207 3.4E-84 T 26-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein PAM18_RS17875 743120926fdaad621cad5b298a609696 210 Pfam PF12697 Alpha/beta hydrolase family 16 115 6.0E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS17875 743120926fdaad621cad5b298a609696 210 PANTHER PTHR13136:SF4 3 207 3.4E-84 T 26-04-2016 PAM18_RS17875 743120926fdaad621cad5b298a609696 210 Gene3D G3DSA:3.40.50.1820 14 205 5.5E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19470 6907a788bf9bb5e0ba3527720620c042 259 PANTHER PTHR10204 1 221 4.8E-151 T 26-04-2016 PAM18_RS19470 6907a788bf9bb5e0ba3527720620c042 259 PANTHER PTHR10204:SF46 1 221 4.8E-151 T 26-04-2016 PAM18_RS19470 6907a788bf9bb5e0ba3527720620c042 259 Pfam PF02525 Flavodoxin-like fold 1 214 4.9E-57 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS19470 6907a788bf9bb5e0ba3527720620c042 259 SUPERFAMILY SSF52218 1 257 8.76E-72 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS19470 6907a788bf9bb5e0ba3527720620c042 259 Gene3D G3DSA:3.40.50.360 1 234 3.9E-71 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 579 627 - T 26-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 635 61.246 T 26-04-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 42 0.0011 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 SUPERFAMILY SSF50974 60 504 3.01E-133 T 26-04-2016 IPR011045 Nitrous oxide reductase, N-terminal PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 PANTHER PTHR22888 527 634 5.6E-56 T 26-04-2016 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 15 634 0.0 T 26-04-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 PANTHER PTHR22888:SF3 527 634 5.6E-56 T 26-04-2016 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 SUPERFAMILY SSF49503 507 634 1.92E-35 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 Gene3D G3DSA:2.130.10.10 104 516 2.9E-175 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 Gene3D G3DSA:2.60.40.420 527 633 3.2E-48 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS08090 a6ce4b522df60b40a13d259fd0137b13 636 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 576 627 1.0E-4 T 26-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 PAM18_RS20645 90a6d83c3ea9c739564b513fee210330 352 Pfam PF02445 Quinolinate synthetase A protein 34 339 7.4E-104 T 26-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PAM18_RS20645 90a6d83c3ea9c739564b513fee210330 352 PANTHER PTHR30573 7 351 9.6E-159 T 26-04-2016 PAM18_RS20645 90a6d83c3ea9c739564b513fee210330 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 341 5.5E-111 T 26-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PAM18_RS20645 90a6d83c3ea9c739564b513fee210330 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 70.748 T 26-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PAM18_RS20645 90a6d83c3ea9c739564b513fee210330 352 SUPERFAMILY SSF142754 31 340 1.29E-109 T 26-04-2016 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 SUPERFAMILY SSF56519 54 221 1.83E-44 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 Gene3D G3DSA:3.90.1310.10 129 228 1.7E-28 T 26-04-2016 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 207 1.4E-17 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 Gene3D G3DSA:3.40.710.10 229 553 1.4E-87 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 PANTHER PTHR30627 1 569 2.4E-226 T 26-04-2016 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 SUPERFAMILY SSF56601 174 561 8.54E-92 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 PANTHER PTHR30627:SF1 1 569 2.4E-226 T 26-04-2016 PAM18_RS23040 d8b043b32f68e128b57490b817a9f3ec 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 546 3.9E-84 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 PANTHER PTHR21600:SF23 129 187 3.4E-89 T 26-04-2016 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 Pfam PF00849 RNA pseudouridylate synthase 11 155 4.9E-16 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 SUPERFAMILY SSF55120 11 184 2.56E-44 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 PANTHER PTHR21600 8 112 3.4E-89 T 26-04-2016 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 PANTHER PTHR21600 129 187 3.4E-89 T 26-04-2016 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 184 4.4E-59 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 PANTHER PTHR21600:SF23 8 112 3.4E-89 T 26-04-2016 PAM18_RS04940 8f6d47d06d031b22c6f834db18ef880e 189 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 46 60 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:1.20.1050.10 87 202 7.8E-34 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.8E-15 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF47616 80 201 1.81E-31 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 195 1.9E-7 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:3.40.30.10 2 86 1.6E-26 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF52833 1 85 9.49E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 PANTHER PTHR11260 1 204 2.1E-86 T 26-04-2016 PAM18_RS11035 3da66da9afd078b74ab996f33d91ce2f 206 PANTHER PTHR11260:SF157 1 204 2.1E-86 T 26-04-2016 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 SUPERFAMILY SSF52540 54 189 1.97E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 PANTHER PTHR13779:SF28 27 189 1.1E-96 T 26-04-2016 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 PANTHER PTHR13779:SF28 216 289 1.1E-96 T 26-04-2016 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 Pfam PF05673 Protein of unknown function (DUF815) 34 289 3.3E-104 T 26-04-2016 IPR008533 Domain of unknown function DUF815 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 PANTHER PTHR13779 216 289 1.1E-96 T 26-04-2016 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 PANTHER PTHR13779 27 189 1.1E-96 T 26-04-2016 PAM18_RS10975 3d58b4fbe22aaf9bbd7df9aa9500278b 296 Gene3D G3DSA:3.40.50.300 60 222 1.6E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS11735 c040930cab55704341e44ed8c1810ae4 304 Pfam PF00756 Putative esterase 62 212 1.5E-12 T 26-04-2016 IPR000801 Putative esterase PAM18_RS11735 c040930cab55704341e44ed8c1810ae4 304 SUPERFAMILY SSF53474 39 293 2.76E-53 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11735 c040930cab55704341e44ed8c1810ae4 304 PANTHER PTHR40841 1 304 4.4E-134 T 26-04-2016 PAM18_RS11735 c040930cab55704341e44ed8c1810ae4 304 Gene3D G3DSA:3.40.50.1820 50 294 6.2E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11735 c040930cab55704341e44ed8c1810ae4 304 PANTHER PTHR40841:SF2 1 304 4.4E-134 T 26-04-2016 PAM18_RS08070 6ea14401f55c799d9eb0c0e29603f874 178 Pfam PF05573 NosL 19 163 4.9E-51 T 26-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL PAM18_RS08070 6ea14401f55c799d9eb0c0e29603f874 178 PANTHER PTHR41247 6 177 4.3E-55 T 26-04-2016 PAM18_RS08070 6ea14401f55c799d9eb0c0e29603f874 178 SUPERFAMILY SSF160387 66 172 4.18E-32 T 26-04-2016 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 SUPERFAMILY SSF103473 10 397 2.09E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 Gene3D G3DSA:1.20.1250.20 16 198 4.4E-34 T 26-04-2016 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 Gene3D G3DSA:1.20.1250.20 217 395 2.4E-9 T 26-04-2016 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 PANTHER PTHR23502:SF39 14 397 9.8E-176 T 26-04-2016 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 Pfam PF07690 Major Facilitator Superfamily 25 351 2.2E-40 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 PANTHER PTHR23502 14 397 9.8E-176 T 26-04-2016 PAM18_RS04090 66e1210131dab05d62a945e76666c137 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 392 2.2E-93 T 26-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 Pfam PF04452 RNA methyltransferase 19 234 9.3E-42 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 232 1.4E-21 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 Gene3D G3DSA:3.40.1280.10 2 234 6.2E-55 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 PIRSF PIRSF015601 2 235 3.7E-46 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 SUPERFAMILY SSF75217 72 234 6.28E-35 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 PANTHER PTHR30027 9 234 2.9E-45 T 26-04-2016 PAM18_RS26520 1c487ba5084526922d05365b66a4759c 235 PANTHER PTHR30027:SF3 9 234 2.9E-45 T 26-04-2016 PAM18_RS13710 f4ae11b6a5cea2db882d34675be3fa09 131 Pfam PF14107 Domain of unknown function (DUF4280) 6 125 2.5E-27 T 26-04-2016 IPR025460 Protein of unknown function DUF4280 PAM18_RS03175 6daddb1586f71ec3cbf0acf70f5d7671 1217 Pfam PF13550 Putative phage tail protein 339 505 2.7E-25 T 26-04-2016 IPR032876 Tip attachment protein J PAM18_RS03175 6daddb1586f71ec3cbf0acf70f5d7671 1217 PANTHER PTHR36251:SF2 1 1105 0.0 T 26-04-2016 PAM18_RS03175 6daddb1586f71ec3cbf0acf70f5d7671 1217 Pfam PF09327 Domain of unknown function (DUF1983) 1066 1144 1.6E-22 T 26-04-2016 IPR015406 Domain of unknown function DUF1983 PAM18_RS03175 6daddb1586f71ec3cbf0acf70f5d7671 1217 PANTHER PTHR36251 1 1105 0.0 T 26-04-2016 PAM18_RS03175 6daddb1586f71ec3cbf0acf70f5d7671 1217 SUPERFAMILY SSF49265 619 722 1.15E-5 T 26-04-2016 IPR003961 Fibronectin type III GO:0005515 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 Pfam PF00203 Ribosomal protein S19 3 83 8.2E-36 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 PANTHER PTHR11880 2 91 3.4E-52 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 Gene3D G3DSA:3.30.860.10 2 90 1.9E-39 T 26-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 8.3E-44 T 26-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-22 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-22 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-22 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 26-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 SUPERFAMILY SSF54570 3 84 1.11E-34 T 26-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 PIRSF PIRSF002144 1 91 3.9E-31 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03445 2469a8e8ac64f8ae89c6400722106914 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 PAM18_RS18890 5488e12f1dd778535d8ab646900c4647 135 PANTHER PTHR35813:SF1 2 134 1.6E-49 T 26-04-2016 PAM18_RS18890 5488e12f1dd778535d8ab646900c4647 135 Pfam PF04304 Protein of unknown function (DUF454) 15 129 6.3E-41 T 26-04-2016 IPR007401 Protein of unknown function DUF454 PAM18_RS18890 5488e12f1dd778535d8ab646900c4647 135 PANTHER PTHR35813 2 134 1.6E-49 T 26-04-2016 PAM18_RS18890 5488e12f1dd778535d8ab646900c4647 135 PIRSF PIRSF016789 14 134 4.1E-37 T 26-04-2016 IPR007401 Protein of unknown function DUF454 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 1.1E-5 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 330 345 1.1E-5 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 Gene3D G3DSA:2.40.50.100 211 244 3.2E-20 T 26-04-2016 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 Gene3D G3DSA:2.40.50.100 50 80 3.2E-20 T 26-04-2016 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 SUPERFAMILY SSF111369 50 128 4.97E-11 T 26-04-2016 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 Pfam PF00529 HlyD membrane-fusion protein of T1SS 89 342 1.0E-7 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 SUPERFAMILY SSF111369 183 305 4.71E-13 T 26-04-2016 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 290 6.5E-19 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 PANTHER PTHR30386:SF7 11 342 2.0E-139 T 26-04-2016 PAM18_RS10910 0ab300626c6896450c39229260b501d3 354 PANTHER PTHR30386 11 342 2.0E-139 T 26-04-2016 PAM18_RS06655 ab3cf052025d76220ab82962bb45249a 408 PANTHER PTHR30574 1 346 1.3E-224 T 26-04-2016 PAM18_RS06655 ab3cf052025d76220ab82962bb45249a 408 PANTHER PTHR30574:SF6 1 346 1.3E-224 T 26-04-2016 PAM18_RS06655 ab3cf052025d76220ab82962bb45249a 408 Pfam PF04143 Sulphur transport 7 162 8.5E-26 T 26-04-2016 IPR007272 Sulphur transport domain PAM18_RS06655 ab3cf052025d76220ab82962bb45249a 408 Pfam PF04143 Sulphur transport 239 393 1.2E-20 T 26-04-2016 IPR007272 Sulphur transport domain PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:3.40.190.10 284 295 1.8E-25 T 26-04-2016 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:3.40.190.10 90 179 1.8E-25 T 26-04-2016 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Pfam PF03466 LysR substrate binding domain 94 296 1.9E-28 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:1.10.10.10 3 84 7.8E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 SUPERFAMILY SSF53850 90 296 2.33E-39 T 26-04-2016 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.5E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.3E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 SUPERFAMILY SSF46785 4 84 1.57E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 Gene3D G3DSA:3.40.190.10 180 267 1.9E-28 T 26-04-2016 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PANTHER PTHR30118:SF4 1 302 4.7E-138 T 26-04-2016 PAM18_RS27135 0c4c62c1ffc1a0fb1b0c71b63eff8282 302 PANTHER PTHR30118 1 302 4.7E-138 T 26-04-2016 PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 SUPERFAMILY SSF56317 1 270 1.57E-67 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 Pfam PF00795 Carbon-nitrogen hydrolase 5 252 6.7E-43 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 PANTHER PTHR23088 1 270 1.5E-95 T 26-04-2016 PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 PANTHER PTHR23088:SF11 1 270 1.5E-95 T 26-04-2016 PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 144 164 - T 26-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site PAM18_RS15235 e3cc93b3f0432f9e879de2210989a8ac 270 Gene3D G3DSA:3.60.110.10 2 270 2.7E-72 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 Gene3D G3DSA:3.30.70.260 85 169 3.9E-24 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 PANTHER PTHR34875 1 169 5.1E-110 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 Gene3D G3DSA:3.30.70.260 1 68 2.7E-20 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 PIRSF PIRSF028103 1 171 4.2E-56 T 26-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 Pfam PF13740 ACT domain 3 65 6.4E-13 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 PANTHER PTHR34875:SF1 1 169 5.1E-110 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 Pfam PF01842 ACT domain 96 125 5.1E-7 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 SUPERFAMILY SSF55021 1 67 4.2E-14 T 26-04-2016 PAM18_RS02450 60705d0f06021c9201519d2ceb20e2c2 171 SUPERFAMILY SSF55021 87 168 1.47E-17 T 26-04-2016 PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 PANTHER PTHR10799 396 522 2.1E-35 T 26-04-2016 PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 359 522 3.1E-52 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 519 2.4E-47 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 SUPERFAMILY SSF55073 366 522 6.28E-49 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 SMART SM00267 350 523 2.5E-63 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 Gene3D G3DSA:3.30.70.270 363 522 2.4E-54 T 26-04-2016 PAM18_RS10735 a8819ca4c70e7b1f925063f55f3bf96e 525 PANTHER PTHR10799:SF750 396 522 2.1E-35 T 26-04-2016 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 Gene3D G3DSA:3.40.190.10 90 175 7.1E-22 T 26-04-2016 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 Gene3D G3DSA:1.10.10.10 1 84 8.4E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 SUPERFAMILY SSF46785 1 84 1.18E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 Pfam PF03466 LysR substrate binding domain 91 289 4.6E-43 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 SUPERFAMILY SSF53850 91 290 3.86E-41 T 26-04-2016 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 PANTHER PTHR30419 1 306 2.5E-125 T 26-04-2016 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.8E-22 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 Gene3D G3DSA:3.40.190.10 176 266 2.0E-21 T 26-04-2016 PAM18_RS15620 162594c6474fa0e7d8a81cbfb6e48a76 306 PANTHER PTHR30419:SF3 1 306 2.5E-125 T 26-04-2016 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 PANTHER PTHR18895:SF66 1 303 4.6E-164 T 26-04-2016 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 6 287 5.9E-131 T 26-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:1.10.8.10 8 99 1.2E-10 T 26-04-2016 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:3.40.50.150 101 285 9.2E-53 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 SUPERFAMILY SSF53335 9 286 6.2E-55 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 PANTHER PTHR18895 1 303 4.6E-164 T 26-04-2016 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 293 52.859 T 26-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Pfam PF05175 Methyltransferase small domain 122 208 9.5E-16 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 PIRSF PIRSF037167 1 300 6.6E-140 T 26-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 PAM18_RS17270 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 286 4.4E-80 T 26-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 Pfam PF03466 LysR substrate binding domain 88 294 3.7E-43 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 SUPERFAMILY SSF46785 2 112 3.03E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 PANTHER PTHR30537 1 295 1.6E-170 T 26-04-2016 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 PANTHER PTHR30537:SF21 1 295 1.6E-170 T 26-04-2016 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 SUPERFAMILY SSF53850 88 299 7.14E-41 T 26-04-2016 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 Gene3D G3DSA:1.10.10.10 2 85 3.5E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 Gene3D G3DSA:3.40.190.10 176 262 4.4E-21 T 26-04-2016 PAM18_RS07315 960ce6dc24eb54dc57bc089abacafbe7 306 Gene3D G3DSA:3.40.190.10 89 175 1.8E-7 T 26-04-2016 PAM18_RS02540 110938e2bd63ff10bdfe6ed45ae0f625 240 SUPERFAMILY SSF53474 5 236 6.1E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02540 110938e2bd63ff10bdfe6ed45ae0f625 240 Gene3D G3DSA:3.40.50.1820 4 236 7.7E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02540 110938e2bd63ff10bdfe6ed45ae0f625 240 PANTHER PTHR10992 4 236 9.4E-23 T 26-04-2016 PAM18_RS02540 110938e2bd63ff10bdfe6ed45ae0f625 240 Pfam PF12697 Alpha/beta hydrolase family 20 227 3.7E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS02540 110938e2bd63ff10bdfe6ed45ae0f625 240 PANTHER PTHR10992:SF812 4 236 9.4E-23 T 26-04-2016 PAM18_RS22640 ce1aed3d297dc4e954554b1cf5dfb647 190 SUPERFAMILY SSF101874 18 188 8.89E-16 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22640 ce1aed3d297dc4e954554b1cf5dfb647 190 PIRSF PIRSF029811 1 190 4.3E-62 T 26-04-2016 IPR027016 Uncharacterised protein with YceI domain PAM18_RS22640 ce1aed3d297dc4e954554b1cf5dfb647 190 Pfam PF04264 YceI-like domain 20 160 7.7E-8 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22640 ce1aed3d297dc4e954554b1cf5dfb647 190 Gene3D G3DSA:2.40.128.110 18 95 1.2E-6 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS22640 ce1aed3d297dc4e954554b1cf5dfb647 190 SMART SM00867 19 188 2.4E-10 T 26-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 SUPERFAMILY SSF51197 3 174 1.21E-6 T 26-04-2016 PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 PANTHER PTHR41536 2 226 1.9E-136 T 26-04-2016 PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 PANTHER PTHR41536:SF1 2 226 1.9E-136 T 26-04-2016 PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 SMART SM00702 1 177 1.4E-33 T 26-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 9.5E-13 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS23525 30476805c7ffb3b506652d87850d94ec 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.239 T 26-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 Gene3D G3DSA:3.40.190.10 126 249 3.8E-15 T 26-04-2016 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 SUPERFAMILY SSF53850 58 326 3.58E-36 T 26-04-2016 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 SUPERFAMILY SSF160387 372 465 5.23E-14 T 26-04-2016 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 PANTHER PTHR30024 1 395 7.9E-193 T 26-04-2016 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 PANTHER PTHR30024:SF4 1 395 7.9E-193 T 26-04-2016 PAM18_RS14105 ed9daa6ba43f14e87156bf26e878ddb6 468 Pfam PF13379 NMT1-like family 24 267 1.4E-14 T 26-04-2016 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 PIRSF PIRSF000484 1 385 5.6E-62 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 Gene3D G3DSA:3.20.140.10 4 380 9.8E-144 T 26-04-2016 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 PANTHER PTHR11098:SF16 1 397 6.4E-219 T 26-04-2016 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF54675 6 140 4.71E-42 T 26-04-2016 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 398 48.512 T 26-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 397 6.0E-150 T 26-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF51690 122 396 3.2E-89 T 26-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 397 8.9E-83 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS22825 d83aa6debe17f5f2595771c9199900a9 398 PANTHER PTHR11098 1 397 6.4E-219 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Pfam PF00501 AMP-binding enzyme 34 476 6.3E-87 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 SUPERFAMILY SSF56801 16 570 3.27E-132 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Gene3D G3DSA:2.30.38.10 390 467 2.9E-21 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Gene3D G3DSA:3.40.50.980 226 389 4.4E-37 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 PANTHER PTHR24096:SF170 1 614 0.0 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Gene3D G3DSA:3.40.50.980 30 225 2.8E-22 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Gene3D G3DSA:3.30.300.30 473 572 1.9E-24 T 26-04-2016 PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 561 1.5E-16 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS05470 14f8657cb354afe35bb8a41b35eb34c6 632 PANTHER PTHR24096 1 614 0.0 T 26-04-2016 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.6E-17 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.6E-17 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.6E-17 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 PANTHER PTHR33175 3 95 4.2E-54 T 26-04-2016 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 PANTHER PTHR33175:SF2 3 95 4.2E-54 T 26-04-2016 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.539 T 26-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 Gene3D G3DSA:4.10.520.10 4 94 7.5E-36 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 SUPERFAMILY SSF47729 4 93 2.94E-31 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.6E-31 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 1.3E-54 T 26-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 26-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 PAM18_RS11490 c17c62d0467f3ba379d4298e2891e80d 100 SMART SM00411 4 93 2.0E-41 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS01090 1b8e9d25eddef58dab957b2ee7d94c94 477 PIRSF PIRSF006060 2 472 1.6E-81 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS01090 1b8e9d25eddef58dab957b2ee7d94c94 477 Pfam PF13520 Amino acid permease 21 411 2.3E-38 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS01090 1b8e9d25eddef58dab957b2ee7d94c94 477 PANTHER PTHR11785 9 430 4.4E-61 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 Pfam PF00293 NUDIX domain 44 141 7.5E-15 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 PANTHER PTHR22769:SF17 1 180 4.9E-106 T 26-04-2016 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 PANTHER PTHR22769 1 180 4.9E-106 T 26-04-2016 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:2.20.70.10 1 35 4.3E-19 T 26-04-2016 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 SUPERFAMILY SSF55811 2 165 1.14E-41 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:3.90.79.10 36 168 1.9E-34 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS06030 e930c2018e982e423413482d9f607846 184 Pfam PF14803 Nudix N-terminal 2 35 3.7E-17 T 26-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- PAM18_RS24115 087cb0ca58126dbc033ccf2b06ff7aa6 568 PANTHER PTHR34597:SF1 1 568 1.1E-236 T 26-04-2016 PAM18_RS24115 087cb0ca58126dbc033ccf2b06ff7aa6 568 Pfam PF08479 POTRA domain, ShlB-type 71 146 1.3E-22 T 26-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PAM18_RS24115 087cb0ca58126dbc033ccf2b06ff7aa6 568 PANTHER PTHR34597 1 568 1.1E-236 T 26-04-2016 PAM18_RS24115 087cb0ca58126dbc033ccf2b06ff7aa6 568 Gene3D G3DSA:3.10.20.310 67 146 3.9E-16 T 26-04-2016 PAM18_RS24115 087cb0ca58126dbc033ccf2b06ff7aa6 568 Gene3D G3DSA:2.40.160.50 181 568 1.9E-51 T 26-04-2016 PAM18_RS19755 b46ab7833b25c3756096c1504f096b35 223 SUPERFAMILY SSF49899 3 222 3.88E-75 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS19755 b46ab7833b25c3756096c1504f096b35 223 Pfam PF08787 Alginate lyase 3 222 1.5E-51 T 26-04-2016 IPR014895 Alginate lyase 2 PAM18_RS19755 b46ab7833b25c3756096c1504f096b35 223 Gene3D G3DSA:2.60.120.200 2 223 1.6E-57 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain PAM18_RS26210 830a0759849f291edd54aa8a1b8997fb 268 SUPERFAMILY SSF56112 35 217 8.56E-12 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS26210 830a0759849f291edd54aa8a1b8997fb 268 PIRSF PIRSF037318 2 266 2.0E-125 T 26-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 PAM18_RS26210 830a0759849f291edd54aa8a1b8997fb 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 231 2.0E-71 T 26-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 PAM18_RS07115 b7176690f0941b834b72189f317e8eb0 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 26-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 PAM18_RS07115 b7176690f0941b834b72189f317e8eb0 123 PANTHER PTHR34299:SF1 1 122 5.0E-39 T 26-04-2016 PAM18_RS07115 b7176690f0941b834b72189f317e8eb0 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 20 121 1.9E-32 T 26-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 PAM18_RS07115 b7176690f0941b834b72189f317e8eb0 123 Gene3D G3DSA:1.10.3830.10 7 122 2.1E-42 T 26-04-2016 PAM18_RS07115 b7176690f0941b834b72189f317e8eb0 123 PANTHER PTHR34299 1 122 5.0E-39 T 26-04-2016 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 PANTHER PTHR30328:SF4 10 205 8.0E-52 T 26-04-2016 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 Gene3D G3DSA:1.10.10.60 12 62 2.9E-21 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 SUPERFAMILY SSF46689 12 92 1.5E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 207 3.3E-12 T 26-04-2016 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 SUPERFAMILY SSF48498 91 202 8.16E-11 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.5E-16 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 PANTHER PTHR30328 10 205 8.0E-52 T 26-04-2016 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 Gene3D G3DSA:1.10.357.10 63 210 2.9E-44 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.6E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06420 857800701ddeb1e142a67ac626581305 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.6E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 Pfam PF03668 P-loop ATPase protein family 1 285 9.1E-95 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 PIRSF PIRSF005052 1 286 1.7E-114 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 40.437 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 Gene3D G3DSA:3.40.50.300 1 154 1.3E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 SUPERFAMILY SSF52540 1 154 1.88E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 PANTHER PTHR30448:SF0 1 284 6.6E-138 T 26-04-2016 PAM18_RS23275 22d0913c307e340da25028e7b7738e13 286 PANTHER PTHR30448 1 284 6.6E-138 T 26-04-2016 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 482 3.4E-62 T 26-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 SUPERFAMILY SSF56645 13 282 1.04E-81 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 SUPERFAMILY SSF47203 272 494 6.7E-45 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 PANTHER PTHR36117:SF1 1 516 0.0 T 26-04-2016 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 PIRSF PIRSF000331 11 501 3.3E-192 T 26-04-2016 IPR004925 HpaB/PvcC/4-BUDH PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 Gene3D G3DSA:1.20.140.10 274 475 1.2E-34 T 26-04-2016 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 26-04-2016 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431|UniPathway: UPA00208 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 Gene3D G3DSA:1.10.3140.10 12 149 1.5E-54 T 26-04-2016 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 PANTHER PTHR36117 1 516 0.0 T 26-04-2016 PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 PIRSF PIRSF500125 1 518 1.1E-283 T 26-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 7.6E-93 T 26-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal PAM18_RS04325 acdb99f5de259ca980a8b62b195cbf3a 520 Gene3D G3DSA:2.40.110.10 152 273 9.2E-48 T 26-04-2016 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 SUPERFAMILY SSF46689 17 79 1.53E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 2.6E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 Gene3D G3DSA:1.10.357.10 17 207 2.8E-23 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 PANTHER PTHR30055:SF39 104 258 7.8E-63 T 26-04-2016 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 PANTHER PTHR30055:SF39 17 84 7.8E-63 T 26-04-2016 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 PANTHER PTHR30055 104 258 7.8E-63 T 26-04-2016 PAM18_RS17980 150d76218a786fce317c1425bcb4cda1 282 PANTHER PTHR30055 17 84 7.8E-63 T 26-04-2016 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Gene3D G3DSA:1.10.760.10 315 422 4.4E-27 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 SUPERFAMILY SSF46626 19 152 1.4E-23 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Gene3D G3DSA:1.10.760.10 26 127 1.3E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Gene3D G3DSA:1.10.760.10 175 287 5.4E-13 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 PANTHER PTHR35008:SF3 5 439 6.7E-299 T 26-04-2016 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Pfam PF00034 Cytochrome c 30 127 2.6E-5 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Pfam PF00034 Cytochrome c 176 287 3.5E-4 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 PIRSF PIRSF000018 2 432 2.7E-167 T 26-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 PRINTS PR00605 Class IC cytochrome C signature 375 397 2.6E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 PRINTS PR00605 Class IC cytochrome C signature 322 333 2.6E-5 T 26-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 SUPERFAMILY SSF46626 315 417 5.3E-26 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 313 397 9.2E-11 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 PANTHER PTHR35008 5 439 6.7E-299 T 26-04-2016 PAM18_RS14255 60ff1b39eef21c848830f5054053bac3 439 SUPERFAMILY SSF46626 176 293 1.03E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.547 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 9.0E-13 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 8.9E-37 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 SUPERFAMILY SSF47336 2 77 3.14E-24 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0084 T 26-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 Gene3D G3DSA:1.10.1200.10 3 77 5.3E-36 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 26-04-2016 IPR006162 Phosphopantetheine attachment site PAM18_RS10245 bf67608ca7d265aa4d65a517423f7750 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.5E-17 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS27560 5b233e54520a656afa51371c003f6cac 237 PIRSF PIRSF032817 1 237 5.2E-112 T 26-04-2016 IPR017008 Uncharacterised conserved protein UCP032817 PAM18_RS05235 811c298834a610b8cea239732c0fc0e3 780 Gene3D G3DSA:3.60.10.10 455 766 3.7E-27 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS05235 811c298834a610b8cea239732c0fc0e3 780 PANTHER PTHR11371 10 774 0.0 T 26-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 PAM18_RS05235 811c298834a610b8cea239732c0fc0e3 780 PANTHER PTHR11371:SF31 10 774 0.0 T 26-04-2016 PAM18_RS05235 811c298834a610b8cea239732c0fc0e3 780 Pfam PF00932 Lamin Tail Domain 21 129 9.5E-16 T 26-04-2016 IPR001322 Lamin Tail Domain PAM18_RS05235 811c298834a610b8cea239732c0fc0e3 780 SUPERFAMILY SSF56219 453 769 1.43E-36 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 282 49.118 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.30.70.260 1 82 1.8E-19 T 26-04-2016 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 282 2.6E-110 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-64 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.40.50.170 86 279 1.6E-57 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 Pfam PF00551 Formyl transferase 87 261 7.8E-39 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF53328 87 283 1.96E-62 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PIRSF PIRSF036480 1 283 2.7E-119 T 26-04-2016 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PANTHER PTHR10520 1 276 1.3E-149 T 26-04-2016 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF55021 3 84 1.75E-14 T 26-04-2016 PAM18_RS22510 157725f751454ca11ae9737cff042b70 283 PANTHER PTHR10520:SF7 1 276 1.3E-149 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS12935 1e7b869e4c595163aac329ab76b57427 477 SUPERFAMILY SSF111283 3 472 8.63E-95 T 26-04-2016 PAM18_RS12935 1e7b869e4c595163aac329ab76b57427 477 PANTHER PTHR30624 10 477 1.2E-194 T 26-04-2016 PAM18_RS12935 1e7b869e4c595163aac329ab76b57427 477 PANTHER PTHR30624:SF10 10 477 1.2E-194 T 26-04-2016 PAM18_RS12935 1e7b869e4c595163aac329ab76b57427 477 Pfam PF01523 Putative modulator of DNA gyrase 21 321 6.1E-41 T 26-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS22275 59bd22079acb328c6403f46b487eaefb 319 Pfam PF16220 Domain of unknown function (DUF4880) 17 57 2.0E-11 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS22275 59bd22079acb328c6403f46b487eaefb 319 PANTHER PTHR30273 8 318 7.9E-74 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS22275 59bd22079acb328c6403f46b487eaefb 319 PANTHER PTHR30273:SF2 8 318 7.9E-74 T 26-04-2016 PAM18_RS22275 59bd22079acb328c6403f46b487eaefb 319 PIRSF PIRSF018266 5 318 5.1E-71 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS22275 59bd22079acb328c6403f46b487eaefb 319 Pfam PF04773 FecR protein 115 208 2.4E-14 T 26-04-2016 IPR006860 FecR protein PAM18_RS23745 de7cc921f6e199f381c47ae626a8443a 195 Pfam PF14341 PilX N-terminal 9 59 3.8E-10 T 26-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain PAM18_RS18760 242e57b1adef8238c4f3fc664d1c8251 135 Pfam PF10975 Protein of unknown function (DUF2802) 64 130 2.5E-23 T 26-04-2016 IPR021244 Protein of unknown function DUF2802 PAM18_RS23455 61337fa4edbaf400e69511ea5e687662 483 Pfam PF03573 outer membrane porin, OprD family 61 481 3.2E-123 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS23455 61337fa4edbaf400e69511ea5e687662 483 Gene3D G3DSA:2.40.160.10 67 483 1.0E-122 T 26-04-2016 IPR023614 Porin domain PAM18_RS23455 61337fa4edbaf400e69511ea5e687662 483 PANTHER PTHR34596 56 483 1.9E-156 T 26-04-2016 PAM18_RS23455 61337fa4edbaf400e69511ea5e687662 483 PANTHER PTHR34596 1 25 1.9E-156 T 26-04-2016 PAM18_RS22860 37cdf81160f13208f22838c9dae24f98 109 SUPERFAMILY SSF54913 1 100 5.89E-28 T 26-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAM18_RS22860 37cdf81160f13208f22838c9dae24f98 109 Gene3D G3DSA:3.30.70.120 1 106 1.4E-27 T 26-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PAM18_RS22860 37cdf81160f13208f22838c9dae24f98 109 Pfam PF02641 Uncharacterized ACR, COG1993 6 85 1.0E-13 T 26-04-2016 IPR003793 Domain of unknown function DUF190 PAM18_RS02075 4ee9ba721d1293396a13e430b5b1023b 178 SUPERFAMILY SSF50341 33 170 3.79E-28 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02075 4ee9ba721d1293396a13e430b5b1023b 178 Pfam PF01584 CheW-like domain 38 169 6.8E-27 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02075 4ee9ba721d1293396a13e430b5b1023b 178 SMART SM00260 32 168 2.1E-29 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS02075 4ee9ba721d1293396a13e430b5b1023b 178 Gene3D G3DSA:2.40.50.180 74 120 1.8E-6 T 26-04-2016 PAM18_RS02075 4ee9ba721d1293396a13e430b5b1023b 178 PANTHER PTHR22617 35 156 5.5E-24 T 26-04-2016 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 SUPERFAMILY SSF52343 109 258 1.7E-34 T 26-04-2016 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 Pfam PF00970 Oxidoreductase FAD-binding domain 23 94 2.3E-6 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 233 2.7E-13 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 5.5E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 5.5E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 227 5.5E-5 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 Gene3D G3DSA:2.40.30.10 7 98 9.8E-26 T 26-04-2016 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 Gene3D G3DSA:3.40.50.80 103 258 5.7E-45 T 26-04-2016 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 SUPERFAMILY SSF63380 7 104 2.15E-21 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 PANTHER PTHR19370:SF98 1 242 1.5E-120 T 26-04-2016 PAM18_RS24065 ea5e7a0e59ad0e96400b072b0fb2f14a 258 PANTHER PTHR19370 1 242 1.5E-120 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 PIRSF PIRSF002741 17 596 2.7E-113 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 Gene3D G3DSA:3.40.190.10 214 325 2.8E-26 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 Gene3D G3DSA:3.90.76.10 66 213 2.5E-37 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 PANTHER PTHR30290 1 356 8.2E-260 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 PANTHER PTHR30290 383 603 8.2E-260 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 PANTHER PTHR30290:SF2 1 356 8.2E-260 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 PANTHER PTHR30290:SF2 383 603 8.2E-260 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 SUPERFAMILY SSF53850 51 592 7.14E-128 T 26-04-2016 PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 508 3.2E-79 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS16565 2b4a20ee211ac39b9005af043536d869 615 Gene3D G3DSA:3.10.105.10 326 562 1.9E-39 T 26-04-2016 PAM18_RS25465 d7c18f76b3665b4cad81c9bbcdc46c20 280 PANTHER PTHR33643:SF1 1 277 2.4E-60 T 26-04-2016 PAM18_RS25465 d7c18f76b3665b4cad81c9bbcdc46c20 280 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 264 28.436 T 26-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PAM18_RS25465 d7c18f76b3665b4cad81c9bbcdc46c20 280 PANTHER PTHR33643 1 277 2.4E-60 T 26-04-2016 PAM18_RS25465 d7c18f76b3665b4cad81c9bbcdc46c20 280 Pfam PF01774 UreD urease accessory protein 57 253 2.8E-47 T 26-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:1.10.10.10 7 89 4.0E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 PANTHER PTHR30419:SF8 1 311 1.6E-126 T 26-04-2016 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.2E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.2E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.2E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:3.40.190.10 93 177 3.6E-11 T 26-04-2016 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF03466 LysR substrate binding domain 91 298 3.9E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF53850 93 299 3.74E-33 T 26-04-2016 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF46785 4 109 7.57E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 PANTHER PTHR30419 1 311 1.6E-126 T 26-04-2016 PAM18_RS05890 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:3.40.190.10 178 269 4.3E-17 T 26-04-2016 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 PANTHER PTHR11082:SF26 1 312 7.7E-181 T 26-04-2016 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 53.856 T 26-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 PIRSF PIRSF006621 1 319 3.3E-76 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 SUPERFAMILY SSF51395 3 311 4.03E-69 T 26-04-2016 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 Gene3D G3DSA:3.20.20.70 3 244 6.9E-63 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 248 1.9E-64 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 PANTHER PTHR11082 1 312 7.7E-181 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS09420 89973845fe45e36b8b01cbaa37142cc1 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 26-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 PANTHER PTHR11662:SF257 12 440 5.5E-247 T 26-04-2016 PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 Gene3D G3DSA:1.20.1250.20 24 220 1.6E-44 T 26-04-2016 PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 SUPERFAMILY SSF103473 13 432 4.71E-71 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 Gene3D G3DSA:1.20.1250.20 247 430 3.2E-19 T 26-04-2016 PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 PANTHER PTHR11662 12 440 5.5E-247 T 26-04-2016 PAM18_RS14510 67ad86d2ca9228859c2025260dc9dc49 441 Pfam PF07690 Major Facilitator Superfamily 35 397 2.9E-49 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15670 3b1bd08d50918e7e2fe63fbb41433f54 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 4.8E-36 T 26-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PAM18_RS15670 3b1bd08d50918e7e2fe63fbb41433f54 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 88 1.0E-15 T 26-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 PAM18_RS15670 3b1bd08d50918e7e2fe63fbb41433f54 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 91 26.755 T 26-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 PAM18_RS10130 69d9a71aa0861f4e9199e9cf0b5c214a 199 Gene3D G3DSA:2.40.10.220 99 184 8.5E-7 T 26-04-2016 PAM18_RS10130 69d9a71aa0861f4e9199e9cf0b5c214a 199 Pfam PF07238 PilZ domain 78 174 1.5E-11 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 Pfam PF13781 DoxX-like family 308 408 2.8E-23 T 26-04-2016 IPR025695 DoxX-like family PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 PANTHER PTHR12126:SF1 1 316 3.8E-96 T 26-04-2016 PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 193 1.4E-9 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 Gene3D G3DSA:3.40.50.720 1 220 1.5E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 SUPERFAMILY SSF51735 1 262 1.58E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01675 db77f43caba41bb32cd08a9203db406f 423 PANTHER PTHR12126 1 316 3.8E-96 T 26-04-2016 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 5.9E-227 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF52540 6 222 4.15E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:3.40.50.300 4 214 6.6E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:2.40.30.10 215 301 6.1E-36 T 26-04-2016 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:2.40.30.10 303 396 9.3E-47 T 26-04-2016 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.1E-14 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.831 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PANTHER PTHR23115 1 396 1.0E-275 T 26-04-2016 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.1E-15 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF50447 208 304 1.56E-29 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 PANTHER PTHR23115:SF151 1 396 1.0E-275 T 26-04-2016 PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-33 T 26-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF50465 301 396 3.74E-36 T 26-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAM18_RS03350 833cfb1d858a815fe02652457ae86578 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 3.4E-57 T 26-04-2016 PAM18_RS24915 635a2daa3d6bcdee300298461a88c43e 216 Pfam PF01810 LysE type translocator 17 212 4.8E-57 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS24915 635a2daa3d6bcdee300298461a88c43e 216 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 23 210 2.0E-64 T 26-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 PAM18_RS24915 635a2daa3d6bcdee300298461a88c43e 216 PANTHER PTHR30086:SF15 4 211 5.7E-134 T 26-04-2016 PAM18_RS24915 635a2daa3d6bcdee300298461a88c43e 216 PANTHER PTHR30086 4 211 5.7E-134 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS24915 635a2daa3d6bcdee300298461a88c43e 216 PIRSF PIRSF006324 4 215 3.7E-57 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 PANTHER PTHR10617:SF109 4 470 4.6E-17 T 26-04-2016 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 SUPERFAMILY SSF51905 316 418 7.78E-9 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 SUPERFAMILY SSF51905 26 195 7.78E-9 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 PANTHER PTHR10617 4 470 4.6E-17 T 26-04-2016 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 Gene3D G3DSA:3.50.50.60 122 202 7.1E-4 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12270 bc8ea2d5deaf02dda609c8d129308b5e 545 Gene3D G3DSA:3.50.50.60 11 64 7.1E-4 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14285 45153c0eda924a8fecc19fdc8c70c200 260 Gene3D G3DSA:3.20.20.150 4 259 1.8E-87 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS14285 45153c0eda924a8fecc19fdc8c70c200 260 SUPERFAMILY SSF51658 5 251 1.87E-68 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS14285 45153c0eda924a8fecc19fdc8c70c200 260 Pfam PF01261 Xylose isomerase-like TIM barrel 111 198 5.4E-7 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS12400 27b0490b470228bec3dde738605fa33c 196 Pfam PF02525 Flavodoxin-like fold 2 188 4.5E-35 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS12400 27b0490b470228bec3dde738605fa33c 196 PANTHER PTHR10204:SF36 1 192 5.1E-131 T 26-04-2016 PAM18_RS12400 27b0490b470228bec3dde738605fa33c 196 Gene3D G3DSA:3.40.50.360 1 193 3.3E-39 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS12400 27b0490b470228bec3dde738605fa33c 196 PANTHER PTHR10204 1 192 5.1E-131 T 26-04-2016 PAM18_RS12400 27b0490b470228bec3dde738605fa33c 196 SUPERFAMILY SSF52218 1 193 9.92E-40 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS20075 ca19b29caf0fb80839a4377e0c1ffa8f 268 PANTHER PTHR34982 13 257 1.6E-107 T 26-04-2016 PAM18_RS20075 ca19b29caf0fb80839a4377e0c1ffa8f 268 Pfam PF02108 Flagellar assembly protein FliH 112 234 5.5E-34 T 26-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PAM18_RS20075 ca19b29caf0fb80839a4377e0c1ffa8f 268 SUPERFAMILY SSF160527 141 240 1.11E-7 T 26-04-2016 PAM18_RS20075 ca19b29caf0fb80839a4377e0c1ffa8f 268 PANTHER PTHR34982:SF2 13 257 1.6E-107 T 26-04-2016 PAM18_RS07495 62b7e4add30efee3d1f783f2f85cd2e7 73 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.0E-11 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS07495 62b7e4add30efee3d1f783f2f85cd2e7 73 PANTHER PTHR37424:SF1 2 73 1.7E-21 T 26-04-2016 PAM18_RS07495 62b7e4add30efee3d1f783f2f85cd2e7 73 PANTHER PTHR37424 2 73 1.7E-21 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 Gene3D G3DSA:3.40.810.20 406 525 1.2E-10 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 364 523 1.6E-45 T 26-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432:SF18 93 276 7.9E-200 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 SUPERFAMILY SSF100950 225 267 5.36E-46 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 SUPERFAMILY SSF100950 302 550 5.36E-46 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432 22 64 7.9E-200 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432 310 336 7.9E-200 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432 352 578 7.9E-200 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432 93 276 7.9E-200 T 26-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 Gene3D G3DSA:3.30.750.70 225 270 4.9E-33 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 Gene3D G3DSA:3.30.750.70 305 374 4.9E-33 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432:SF18 22 64 7.9E-200 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432:SF18 310 336 7.9E-200 T 26-04-2016 PAM18_RS27690 20ea982c384ff050f0b8d8a3819adaf7 642 PANTHER PTHR21432:SF18 352 578 7.9E-200 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 SUPERFAMILY SSF111369 47 276 3.53E-24 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 262 1.8E-20 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 PANTHER PTHR32347:SF12 1 355 1.8E-117 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 Gene3D G3DSA:2.40.50.100 61 91 5.9E-17 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 Gene3D G3DSA:2.40.50.100 166 197 5.9E-17 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 PANTHER PTHR32347 1 355 1.8E-117 T 26-04-2016 PAM18_RS06425 de0fc1ac8de78895e78b96daf0eaea6f 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.5E-75 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 Gene3D G3DSA:1.10.3150.10 176 453 1.1E-75 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 PANTHER PTHR33525:SF3 82 468 6.8E-118 T 26-04-2016 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 SUPERFAMILY SSF109604 180 452 4.08E-61 T 26-04-2016 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 Gene3D G3DSA:3.90.960.10 30 147 7.1E-7 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 Pfam PF04073 Aminoacyl-tRNA editing domain 30 142 2.7E-16 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 Pfam PF08668 HDOD domain 195 395 2.4E-45 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 PANTHER PTHR33525 82 468 6.8E-118 T 26-04-2016 PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 PIRSF PIRSF036888 1 466 3.7E-281 T 26-04-2016 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type PAM18_RS27925 cb8db8cc0cb6c846083a9167ecc5c863 469 SUPERFAMILY SSF55826 19 145 5.76E-13 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS20470 4162b05fd2ab1263b706012cb9b73de6 186 PANTHER PTHR34980:SF2 1 186 1.5E-89 T 26-04-2016 PAM18_RS20470 4162b05fd2ab1263b706012cb9b73de6 186 PANTHER PTHR34980 1 186 1.5E-89 T 26-04-2016 PAM18_RS14950 fbcf810bf94b1f7daec595a6fa9dd685 183 Pfam PF00419 Fimbrial protein 29 182 5.3E-12 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS14950 fbcf810bf94b1f7daec595a6fa9dd685 183 Gene3D G3DSA:2.60.40.1090 28 183 8.4E-25 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS14950 fbcf810bf94b1f7daec595a6fa9dd685 183 PANTHER PTHR33420 10 183 2.4E-48 T 26-04-2016 PAM18_RS14950 fbcf810bf94b1f7daec595a6fa9dd685 183 SUPERFAMILY SSF49401 28 183 1.89E-24 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS14950 fbcf810bf94b1f7daec595a6fa9dd685 183 PANTHER PTHR33420:SF10 10 183 2.4E-48 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081:SF1 310 382 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081:SF1 401 618 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081:SF1 227 285 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081:SF1 1 174 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 Pfam PF02355 Protein export membrane protein 443 606 2.7E-17 T 26-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 Pfam PF13721 SecD export protein N-terminal TM region 2 104 6.8E-34 T 26-04-2016 IPR027398 SecD export protein N-terminal TM domain PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 SUPERFAMILY SSF82866 325 346 2.09E-42 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 SUPERFAMILY SSF82866 416 611 2.09E-42 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 606 4.8E-134 T 26-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 599 6.5E-70 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 619 49.207 T 26-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081 310 382 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081 401 618 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081 227 285 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 PANTHER PTHR30081 1 174 8.6E-218 T 26-04-2016 PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 Pfam PF07549 SecD/SecF GG Motif 117 141 3.3E-6 T 26-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PAM18_RS05670 8e3d102bbd07675990fba89d144b61fa 620 Gene3D G3DSA:1.20.1640.10 454 613 9.3E-26 T 26-04-2016 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 25 288 1.6E-128 T 26-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 Pfam PF03301 Tryptophan 2,3-dioxygenase 21 207 1.0E-41 T 26-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 25 288 40.411 T 26-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 PANTHER PTHR10138 5 288 6.9E-112 T 26-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 PANTHER PTHR10138:SF0 5 288 6.9E-112 T 26-04-2016 PAM18_RS12405 5f32b09bce00c00ed538df8d5006969d 288 SUPERFAMILY SSF140959 31 287 3.14E-100 T 26-04-2016 PAM18_RS08975 2b70a44a495ec3df2b638589d1b34db2 111 PANTHER PTHR11586 4 110 1.9E-38 T 26-04-2016 PAM18_RS08975 2b70a44a495ec3df2b638589d1b34db2 111 SUPERFAMILY SSF50249 4 110 1.91E-32 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS08975 2b70a44a495ec3df2b638589d1b34db2 111 Pfam PF01588 Putative tRNA binding domain 14 108 2.4E-17 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 PAM18_RS08975 2b70a44a495ec3df2b638589d1b34db2 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 110 8.9E-50 T 26-04-2016 IPR008231 Probable chaperone CsaA PAM18_RS08975 2b70a44a495ec3df2b638589d1b34db2 111 Gene3D G3DSA:2.40.50.140 2 110 2.2E-35 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 SMART SM00382 28 227 4.4E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 PANTHER PTHR24220 5 255 6.1E-180 T 26-04-2016 PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 Gene3D G3DSA:3.40.50.300 3 250 8.4E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 SUPERFAMILY SSF52540 4 249 8.16E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 PIRSF PIRSF039085 1 255 1.7E-114 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 Pfam PF00005 ABC transporter 19 179 1.6E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS10450 cd1514665e2be69e0827888ade189a6d 255 PANTHER PTHR24220:SF347 5 255 6.1E-180 T 26-04-2016 PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 PANTHER PTHR21712 1 214 1.9E-102 T 26-04-2016 PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 209 3.0E-73 T 26-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 SUPERFAMILY SSF55469 8 216 4.06E-47 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 PANTHER PTHR21712:SF31 1 214 1.9E-102 T 26-04-2016 PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 Pfam PF00881 Nitroreductase family 20 183 1.6E-26 T 26-04-2016 IPR029479 Nitroreductase PAM18_RS19205 94dbfcfe4ce34a36f6fc1fb9ccdfe39e 218 Gene3D G3DSA:3.40.109.10 9 216 1.8E-46 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS18170 dfb290a91045cbf40965e1c3594048e3 89 Pfam PF02597 ThiS family 22 89 3.8E-7 T 26-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PAM18_RS18170 dfb290a91045cbf40965e1c3594048e3 89 Gene3D G3DSA:3.10.20.30 4 86 3.3E-18 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS18170 dfb290a91045cbf40965e1c3594048e3 89 PANTHER PTHR38031 1 89 3.5E-21 T 26-04-2016 PAM18_RS18170 dfb290a91045cbf40965e1c3594048e3 89 SUPERFAMILY SSF54285 4 89 1.57E-15 T 26-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAM18_RS18170 dfb290a91045cbf40965e1c3594048e3 89 PANTHER PTHR38031:SF1 1 89 3.5E-21 T 26-04-2016 PAM18_RS17830 b58aedd1c36e1db09143374b5d2b0470 117 SUPERFAMILY SSF55298 14 116 1.1E-29 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS17830 b58aedd1c36e1db09143374b5d2b0470 117 Gene3D G3DSA:3.30.1330.40 18 116 1.8E-23 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS17830 b58aedd1c36e1db09143374b5d2b0470 117 PANTHER PTHR11803 17 117 9.7E-36 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS17830 b58aedd1c36e1db09143374b5d2b0470 117 Pfam PF01042 Endoribonuclease L-PSP 17 114 1.9E-21 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 PANTHER PTHR22572 4 271 6.4E-189 T 26-04-2016 PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 Pfam PF00483 Nucleotidyl transferase 4 240 3.8E-70 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 PANTHER PTHR22572:SF105 4 271 6.4E-189 T 26-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 Gene3D G3DSA:3.90.550.10 1 264 3.1E-69 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 SUPERFAMILY SSF53448 1 288 4.77E-93 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS27000 de52023b0ca246d7e6c67e09c87d7e67 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 2.2E-162 T 26-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.9E-91 T 26-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 PANTHER PTHR11066 5 287 2.1E-122 T 26-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 Gene3D G3DSA:3.10.129.10 5 115 7.1E-48 T 26-04-2016 IPR029069 HotDog domain PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 117 285 1.45E-60 T 26-04-2016 IPR029069 HotDog domain PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 5 114 7.46E-41 T 26-04-2016 IPR029069 HotDog domain PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 Gene3D G3DSA:3.10.129.10 126 285 1.4E-58 T 26-04-2016 IPR029069 HotDog domain PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 PANTHER PTHR11066:SF34 5 287 2.1E-122 T 26-04-2016 PAM18_RS05070 293bdae383efa8c5c0aef6ab6611e4cc 289 Pfam PF13622 Thioesterase-like superfamily 33 282 1.2E-61 T 26-04-2016 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 Gene3D G3DSA:3.40.50.1170 32 243 1.1E-63 T 26-04-2016 IPR027474 L-asparaginase, N-terminal PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PANTHER PTHR11707:SF29 12 359 1.6E-77 T 26-04-2016 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 117 135 2.3E-21 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 37 48 2.3E-21 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 295 313 2.3E-21 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PANTHER PTHR11707 12 359 1.6E-77 T 26-04-2016 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 SUPERFAMILY SSF53774 34 361 1.31E-95 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 25 362 1.6E-113 T 26-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PIRSF PIRSF500176 33 362 1.6E-77 T 26-04-2016 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 Gene3D G3DSA:3.40.50.40 249 360 2.6E-36 T 26-04-2016 IPR027473 L-asparaginase, C-terminal domain PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 SMART SM00870 36 356 3.1E-125 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 39 47 - T 26-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 PIRSF PIRSF001220 31 362 8.3E-86 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 118 128 - T 26-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 PAM18_RS18260 d00c0cdd7fd783a288327595cb2d6e0c 362 Pfam PF00710 Asparaginase, N-terminal 36 226 8.8E-53 T 26-04-2016 IPR027474 L-asparaginase, N-terminal PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 PANTHER PTHR13903 2 284 9.7E-185 T 26-04-2016 IPR012093 Pirin PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 PANTHER PTHR13903:SF12 2 284 9.7E-185 T 26-04-2016 PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 SUPERFAMILY SSF51182 11 284 8.19E-84 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF02678 Pirin 21 127 2.5E-34 T 26-04-2016 IPR003829 Pirin, N-terminal domain PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF05726 Pirin C-terminal cupin domain 182 283 7.4E-30 T 26-04-2016 IPR008778 Pirin, C-terminal domain PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 PIRSF PIRSF006232 4 286 3.3E-92 T 26-04-2016 IPR012093 Pirin PAM18_RS13500 942d207aa98cff337bbaffdf4526d4f6 286 Gene3D G3DSA:2.60.120.10 12 256 8.8E-79 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 Pfam PF03313 Serine dehydratase alpha chain 187 452 9.0E-107 T 26-04-2016 IPR005130 Serine dehydratase-like, alpha subunit PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 SUPERFAMILY SSF143548 17 157 2.88E-44 T 26-04-2016 IPR029009 Allosteric substrate binding domain PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 PANTHER PTHR30182 1 455 5.8E-250 T 26-04-2016 PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 455 5.6E-217 T 26-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 Pfam PF03315 Serine dehydratase beta chain 4 156 5.9E-58 T 26-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 PANTHER PTHR30182:SF1 1 455 5.8E-250 T 26-04-2016 PAM18_RS13335 ad82ef9e56a4d944a2384893e0ae4220 458 Gene3D G3DSA:3.30.1330.90 11 157 3.3E-53 T 26-04-2016 IPR029009 Allosteric substrate binding domain PAM18_RS01540 9954d460eb3366663f73b5ded46bd3c7 203 SUPERFAMILY SSF52833 56 201 3.36E-15 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 SUPERFAMILY SSF55826 2 153 7.19E-41 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 PIRSF PIRSF006181 1 156 9.2E-54 T 26-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 Gene3D G3DSA:3.90.960.10 1 154 4.0E-55 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 PANTHER PTHR30411:SF0 1 156 3.7E-66 T 26-04-2016 PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 142 4.7E-26 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 1.7E-54 T 26-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PAM18_RS07230 0f43629194d0b9d2cfbe15d9d2c8d3c3 156 PANTHER PTHR30411 1 156 3.7E-66 T 26-04-2016 PAM18_RS21855 b960e766486e4f6d00af3d5f5ce7b112 278 Pfam PF08668 HDOD domain 23 207 2.8E-47 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS21855 b960e766486e4f6d00af3d5f5ce7b112 278 PANTHER PTHR33525:SF2 4 278 3.4E-146 T 26-04-2016 PAM18_RS21855 b960e766486e4f6d00af3d5f5ce7b112 278 PANTHER PTHR33525 4 278 3.4E-146 T 26-04-2016 PAM18_RS21855 b960e766486e4f6d00af3d5f5ce7b112 278 Gene3D G3DSA:1.10.3150.10 4 257 1.6E-66 T 26-04-2016 IPR013976 Metal-dependent hydrolase HDOD PAM18_RS21855 b960e766486e4f6d00af3d5f5ce7b112 278 SUPERFAMILY SSF109604 9 252 1.67E-60 T 26-04-2016 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 SUPERFAMILY SSF51905 10 249 1.57E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 Gene3D G3DSA:3.50.50.60 6 232 1.2E-65 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 Gene3D G3DSA:3.50.50.60 324 488 1.2E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 Pfam PF00743 Flavin-binding monooxygenase-like 12 345 7.5E-20 T 26-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 SUPERFAMILY SSF51905 283 487 1.62E-24 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 PANTHER PTHR23023:SF132 7 487 1.4E-281 T 26-04-2016 PAM18_RS15115 f31c91e4b16e9e097357b7de1bdea832 491 PANTHER PTHR23023 7 487 1.4E-281 T 26-04-2016 PAM18_RS18985 10e510fd2ecaa4ce00b37e638af9fa11 139 Pfam PF13474 SnoaL-like domain 9 131 1.7E-16 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS18985 10e510fd2ecaa4ce00b37e638af9fa11 139 Gene3D G3DSA:3.10.450.50 3 133 4.8E-20 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS18985 10e510fd2ecaa4ce00b37e638af9fa11 139 SUPERFAMILY SSF54427 2 131 1.35E-22 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 Pfam PF00270 DEAD/DEAH box helicase 24 187 7.5E-47 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 SUPERFAMILY SSF52540 73 355 5.02E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 SMART SM00490 257 338 1.8E-31 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 SMART SM00487 19 220 3.4E-54 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 Gene3D G3DSA:3.40.50.300 2 216 1.4E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 PANTHER PTHR24031:SF261 2 368 2.7E-164 T 26-04-2016 PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 PANTHER PTHR24031 2 368 2.7E-164 T 26-04-2016 PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 Pfam PF00271 Helicase conserved C-terminal domain 233 338 3.5E-28 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 Gene3D G3DSA:3.40.50.300 217 375 5.4E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07710 6246d9b9ca2cc8c5c69698a1ed332d09 441 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 SUPERFAMILY SSF46689 176 225 8.51E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 Pfam PF02311 AraC-like ligand binding domain 19 151 2.6E-28 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 Gene3D G3DSA:1.10.10.60 175 227 2.8E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 SUPERFAMILY SSF51215 31 151 1.11E-16 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 PANTHER PTHR11019:SF105 1 280 1.4E-120 T 26-04-2016 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 SMART SM00342 190 272 1.6E-32 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 PANTHER PTHR11019 1 280 1.4E-120 T 26-04-2016 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 Pfam PF12833 Helix-turn-helix domain 196 273 2.8E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 Gene3D G3DSA:2.60.120.280 30 141 8.3E-13 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 SUPERFAMILY SSF46689 226 274 3.49E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS08715 4e3036ad3fbb17c58ed5a0e3bca73d62 284 Gene3D G3DSA:1.10.10.60 228 273 5.6E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 Gene3D G3DSA:3.40.630.40 155 252 2.3E-56 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 Gene3D G3DSA:3.40.630.40 303 379 2.3E-56 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 SMART SM00646 217 375 1.3E-66 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 Pfam PF11741 AMIN domain 32 129 5.6E-18 T 26-04-2016 IPR021731 AMIN domain PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 PANTHER PTHR30404 25 395 2.2E-115 T 26-04-2016 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 PANTHER PTHR30404:SF0 25 395 2.2E-115 T 26-04-2016 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 SUPERFAMILY SSF53187 302 379 1.35E-51 T 26-04-2016 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 SUPERFAMILY SSF53187 155 251 1.35E-51 T 26-04-2016 PAM18_RS28925 5b06b1213a5bb75d5a498aeaccd8d8aa 397 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 157 375 1.4E-45 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 PANTHER PTHR15004 1 96 1.6E-32 T 26-04-2016 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.079 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.5E-29 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 SUPERFAMILY SSF141000 3 93 1.7E-28 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.4E-17 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PAM18_RS23360 3205b6f06ff956b6aa25efab63eeadeb 96 PANTHER PTHR15004:SF0 1 96 1.6E-32 T 26-04-2016 PAM18_RS14860 a0701254dc2c49035673307863770362 812 PIRSF PIRSF000460 3 812 6.2E-216 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PAM18_RS14860 a0701254dc2c49035673307863770362 812 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PAM18_RS14860 a0701254dc2c49035673307863770362 812 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 13 812 0.0 T 26-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PAM18_RS14860 a0701254dc2c49035673307863770362 812 Gene3D G3DSA:3.40.50.2000 10 480 7.2E-194 T 26-04-2016 PAM18_RS14860 a0701254dc2c49035673307863770362 812 PANTHER PTHR11468:SF3 5 812 0.0 T 26-04-2016 PAM18_RS14860 a0701254dc2c49035673307863770362 812 SUPERFAMILY SSF53756 11 811 6.99E-301 T 26-04-2016 PAM18_RS14860 a0701254dc2c49035673307863770362 812 Gene3D G3DSA:3.40.50.2000 481 797 5.3E-116 T 26-04-2016 PAM18_RS14860 a0701254dc2c49035673307863770362 812 Pfam PF00343 Carbohydrate phosphorylase 100 812 1.5E-294 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PAM18_RS14860 a0701254dc2c49035673307863770362 812 PANTHER PTHR11468 5 812 0.0 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 SUPERFAMILY SSF46626 188 344 7.28E-44 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 Pfam PF03150 Di-haem cytochrome c peroxidase 53 201 4.8E-51 T 26-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 PANTHER PTHR30600:SF7 8 332 1.5E-121 T 26-04-2016 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 Gene3D G3DSA:1.10.760.10 206 330 2.5E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 Gene3D G3DSA:1.10.760.10 46 205 4.4E-52 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 PIRSF PIRSF000294 1 346 1.9E-158 T 26-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 Pfam PF00034 Cytochrome c 209 322 1.3E-9 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 SUPERFAMILY SSF46626 31 189 2.0E-51 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23920 f36272239e593249e682f5902332e92e 346 PANTHER PTHR30600 8 332 1.5E-121 T 26-04-2016 PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 Gene3D G3DSA:3.40.50.300 40 286 6.5E-110 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 SUPERFAMILY SSF52540 80 268 3.32E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 49 274 1.2E-116 T 26-04-2016 IPR022488 Polyphosphate kinase-2-related PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 PIRSF PIRSF028756 12 304 4.5E-138 T 26-04-2016 IPR016898 Polyphosphate kinase 2 PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 PANTHER PTHR34383 1 304 4.1E-223 T 26-04-2016 PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 49 274 4.5E-116 T 26-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 PAM18_RS13415 11a2a67b3f4c001830ce81ea69b1b29d 304 PANTHER PTHR34383:SF1 1 304 4.1E-223 T 26-04-2016 PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 PANTHER PTHR10472 2 145 2.7E-70 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.557 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.6E-51 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 7.9E-50 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 SUPERFAMILY SSF69500 1 144 1.44E-53 T 26-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PAM18_RS26560 cbbe49a7bfa961f5bf372e9c500cff1f 145 Gene3D G3DSA:3.50.80.10 1 145 4.5E-54 T 26-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 323 8.9E-97 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 PANTHER PTHR30100 1 326 6.8E-129 T 26-04-2016 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 Pfam PF02504 Fatty acid synthesis protein 1 315 7.3E-93 T 26-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 PANTHER PTHR30100:SF1 1 326 6.8E-129 T 26-04-2016 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 PIRSF PIRSF002465 1 325 9.6E-118 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 SUPERFAMILY SSF53659 1 324 6.17E-98 T 26-04-2016 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 Gene3D G3DSA:3.40.718.10 1 323 8.1E-123 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS10230 39cc81e8e60bdcd790f016f114b22e89 326 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 326 140.607 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 PANTHER PTHR23546:SF1 1 402 2.0E-124 T 26-04-2016 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 PRINTS PR01035 Tetracycline resistance protein signature 79 103 6.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 PRINTS PR01035 Tetracycline resistance protein signature 344 367 6.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 PRINTS PR01035 Tetracycline resistance protein signature 258 278 6.5E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 PANTHER PTHR23546 1 402 2.0E-124 T 26-04-2016 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 Pfam PF07690 Major Facilitator Superfamily 21 232 5.4E-22 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 SUPERFAMILY SSF103473 13 388 3.14E-47 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 Gene3D G3DSA:1.20.1250.20 16 206 1.8E-25 T 26-04-2016 PAM18_RS16060 fd4c073c6d8a96ab6420f4e630af11e5 403 Gene3D G3DSA:1.20.1250.20 216 388 9.6E-15 T 26-04-2016 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PANTHER PTHR33778:SF3 1 230 7.4E-107 T 26-04-2016 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.9E-41 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.9E-41 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 84 108 3.9E-41 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 57 79 3.9E-41 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 Pfam PF02308 MgtC family 9 129 8.4E-33 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS12785 9738b28e97a678a5fc5d0acbe4d9d07c 230 PANTHER PTHR33778 1 230 7.4E-107 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 SMART SM00283 276 537 1.1E-81 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 SMART SM00304 296 356 17.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 SMART SM00304 209 261 2.4E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PANTHER PTHR32089:SF64 111 160 2.1E-141 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PANTHER PTHR32089:SF64 183 538 2.1E-141 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PANTHER PTHR32089 111 160 2.1E-141 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PANTHER PTHR32089 183 538 2.1E-141 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 Gene3D G3DSA:1.10.287.950 291 508 2.1E-60 T 26-04-2016 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 Pfam PF00672 HAMP domain 190 255 1.7E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 534 8.7E-51 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.0E-8 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 3.0E-8 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS12765 2dcb22572765a6e90603fa5886fd36c4 538 SUPERFAMILY SSF58104 229 537 1.07E-78 T 26-04-2016 PAM18_RS07070 8c3b2b9d59dc54166b47e1f8a2092265 73 PANTHER PTHR40613 2 72 2.9E-38 T 26-04-2016 PAM18_RS07070 8c3b2b9d59dc54166b47e1f8a2092265 73 PANTHER PTHR40613:SF1 2 72 2.9E-38 T 26-04-2016 PAM18_RS07070 8c3b2b9d59dc54166b47e1f8a2092265 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-23 T 26-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PAM18_RS07070 8c3b2b9d59dc54166b47e1f8a2092265 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 2.8E-31 T 26-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 SUPERFAMILY SSF103473 4 379 7.32E-53 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 Gene3D G3DSA:1.20.1250.20 192 375 1.1E-14 T 26-04-2016 PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 Pfam PF07690 Major Facilitator Superfamily 9 340 4.2E-33 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 Gene3D G3DSA:1.20.1250.20 5 183 7.3E-24 T 26-04-2016 PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 PANTHER PTHR23501 3 386 7.6E-128 T 26-04-2016 PAM18_RS10415 2363ca3d6522ce8d9f3c4009ad874293 392 PANTHER PTHR23501:SF4 3 386 7.6E-128 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 526 8.5E-262 T 26-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:2.40.30.10 289 391 1.4E-25 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PANTHER PTHR23115:SF69 248 465 2.6E-241 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PANTHER PTHR23115:SF69 1 182 2.6E-241 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.30.70.870 392 461 2.3E-15 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF50447 259 390 5.08E-30 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 2.7E-45 T 26-04-2016 IPR032090 Peptide chain release factor 3, C-terminal PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.9E-16 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF54980 390 465 5.76E-18 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF52540 8 274 3.83E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 1.1E-46 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.6E-12 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.6E-12 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.6E-12 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.6E-12 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.6E-12 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PANTHER PTHR23115 248 465 2.6E-241 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 PANTHER PTHR23115 1 182 2.6E-241 T 26-04-2016 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.40.50.300 7 279 1.3E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 51.441 T 26-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site PAM18_RS05265 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF03144 Elongation factor Tu domain 2 311 376 3.0E-10 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 276 3.0E-16 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 Gene3D G3DSA:1.20.140.10 275 447 2.7E-40 T 26-04-2016 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 SUPERFAMILY SSF56645 101 296 1.23E-40 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 SUPERFAMILY SSF47203 285 445 4.99E-39 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 443 6.1E-35 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 Gene3D G3DSA:2.40.110.10 177 274 5.3E-21 T 26-04-2016 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 PANTHER PTHR10909 1 463 8.2E-198 T 26-04-2016 PAM18_RS07165 47372a7a92142b851852e18c56497d4e 575 PANTHER PTHR10909:SF262 1 463 8.2E-198 T 26-04-2016 PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 Gene3D G3DSA:1.20.1250.20 24 227 1.5E-20 T 26-04-2016 PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 PANTHER PTHR23508:SF1 2 447 1.4E-194 T 26-04-2016 PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 PANTHER PTHR23508 2 447 1.4E-194 T 26-04-2016 PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 Gene3D G3DSA:1.20.1250.20 241 428 1.2E-11 T 26-04-2016 PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 SUPERFAMILY SSF103473 6 426 4.32E-53 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS07155 686f08b51b92080abbcccfce68ec14de 469 Pfam PF00083 Sugar (and other) transporter 21 218 1.2E-17 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 PANTHER PTHR11941:SF53 264 337 1.9E-103 T 26-04-2016 PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 PANTHER PTHR11941:SF53 2 193 1.9E-103 T 26-04-2016 PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 SUPERFAMILY SSF52096 264 340 9.29E-59 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 SUPERFAMILY SSF52096 15 193 9.29E-59 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 Gene3D G3DSA:3.90.226.10 15 197 3.6E-49 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 354 1.1E-110 T 26-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 PANTHER PTHR11941 264 337 1.9E-103 T 26-04-2016 PAM18_RS21925 074cd33b68bf7ade379511db8f2e0145 367 PANTHER PTHR11941 2 193 1.9E-103 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 PANTHER PTHR24096:SF218 6 436 3.3E-229 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Pfam PF00550 Phosphopantetheine attachment site 413 473 1.5E-5 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Gene3D G3DSA:1.10.1200.10 410 476 2.9E-11 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 51 62 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Gene3D G3DSA:3.40.50.980 79 217 4.3E-31 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Gene3D G3DSA:3.40.50.980 43 74 4.0E-7 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Gene3D G3DSA:3.30.300.30 301 393 2.0E-15 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 SUPERFAMILY SSF56801 29 420 6.54E-88 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Gene3D G3DSA:2.30.38.10 218 299 1.3E-17 T 26-04-2016 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 SUPERFAMILY SSF47336 409 474 2.34E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 Pfam PF00501 AMP-binding enzyme 41 306 1.6E-52 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS19485 490a59ceedc45b3b632f585e360ad783 502 PANTHER PTHR24096 6 436 3.3E-229 T 26-04-2016 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 1.2E-52 T 26-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 SUPERFAMILY SSF54862 35 162 4.18E-29 T 26-04-2016 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 PANTHER PTHR10849 1 182 2.6E-81 T 26-04-2016 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 152 27.518 T 26-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 PANTHER PTHR10849:SF13 1 182 2.6E-81 T 26-04-2016 PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 Pfam PF12838 4Fe-4S dicluster domain 61 115 1.3E-11 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS11975 9c25c3347707446e91623b59f71861ef 182 Gene3D G3DSA:1.10.1060.10 11 119 3.5E-19 T 26-04-2016 PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 SUPERFAMILY SSF51735 299 587 8.32E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 Gene3D G3DSA:3.90.25.10 500 584 4.2E-7 T 26-04-2016 PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 PANTHER PTHR10366 300 455 2.0E-131 T 26-04-2016 PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 PANTHER PTHR10366 471 592 2.0E-131 T 26-04-2016 PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 Gene3D G3DSA:3.40.50.720 155 245 1.2E-14 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 SUPERFAMILY SSF53335 159 345 7.47E-17 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 Pfam PF02719 Polysaccharide biosynthesis protein 301 608 6.9E-129 T 26-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 Gene3D G3DSA:3.40.50.720 300 499 2.8E-40 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 PANTHER PTHR10366:SF256 300 455 2.0E-131 T 26-04-2016 PAM18_RS09335 1fb47cd378c7dfb05236ce7f8b582149 665 PANTHER PTHR10366:SF256 471 592 2.0E-131 T 26-04-2016 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 SUPERFAMILY SSF53649 237 533 2.06E-31 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 Gene3D G3DSA:3.40.720.10 241 532 1.5E-14 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 PANTHER PTHR30443:SF2 5 577 0.0 T 26-04-2016 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 Pfam PF08019 Domain of unknown function (DUF1705) 55 178 2.6E-6 T 26-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 Pfam PF00884 Sulfatase 239 529 2.9E-49 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS23535 6ad7112d6cd3a9796edd2f0e716f98eb 600 PANTHER PTHR30443 5 577 0.0 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 PIRSF PIRSF019169 1 354 1.3E-124 T 26-04-2016 IPR005883 Type IV pilus assembly protein PilM PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 12 177 1.38E-13 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 PANTHER PTHR32432:SF3 1 353 1.4E-99 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 193 352 7.47E-27 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 353 7.4E-152 T 26-04-2016 IPR005883 Type IV pilus assembly protein PilM PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 196 315 1.6E-28 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 2.9E-139 T 26-04-2016 IPR005883 Type IV pilus assembly protein PilM PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 PANTHER PTHR32432 1 353 1.4E-99 T 26-04-2016 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 SMART SM00842 12 181 7.9E-5 T 26-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 PAM18_RS26385 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 7 104 5.3E-9 T 26-04-2016 PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 SUPERFAMILY SSF51735 1 263 1.33E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 SUPERFAMILY SSF51735 293 327 1.33E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 Gene3D G3DSA:3.40.50.720 1 320 4.4E-60 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 227 2.1E-33 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 PANTHER PTHR10366 284 328 3.1E-109 T 26-04-2016 PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 PANTHER PTHR10366 2 258 3.1E-109 T 26-04-2016 PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 PANTHER PTHR10366:SF418 284 328 3.1E-109 T 26-04-2016 PAM18_RS22750 91edd6774f8b9cfeb803151ed8b58082 329 PANTHER PTHR10366:SF418 2 258 3.1E-109 T 26-04-2016 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF46689 456 508 2.45E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Pfam PF13188 PAS domain 81 133 2.1E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 PANTHER PTHR32071 1 508 6.1E-200 T 26-04-2016 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 416 425 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF55785 80 130 3.29E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Pfam PF00158 Sigma-54 interaction domain 203 369 2.9E-64 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:3.30.450.20 76 137 1.6E-5 T 26-04-2016 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 PANTHER PTHR32071:SF3 1 508 6.1E-200 T 26-04-2016 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:1.10.10.60 453 508 9.0E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 SUPERFAMILY SSF52540 203 445 1.2E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:3.40.50.300 199 375 1.7E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 SMART SM00382 222 367 2.0E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 Gene3D G3DSA:1.10.8.60 376 445 1.3E-21 T 26-04-2016 PAM18_RS13305 0caea87c4a331f85eedb8aedcdb2a4be 511 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 461 508 1.5E-24 T 26-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 PANTHER PTHR11609 3 234 1.9E-124 T 26-04-2016 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 SUPERFAMILY SSF56104 3 232 3.92E-80 T 26-04-2016 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.44 T 26-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 Pfam PF01259 SAICAR synthetase 6 231 1.7E-62 T 26-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 26-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 Gene3D G3DSA:3.30.200.20 1 91 8.4E-34 T 26-04-2016 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 2.3E-79 T 26-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 Gene3D G3DSA:3.30.470.20 92 219 5.9E-52 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 PANTHER PTHR11609:SF2 3 234 1.9E-124 T 26-04-2016 PAM18_RS20600 fc4366bed49b4cf20dd75fcf042c971c 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 26-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 SUPERFAMILY SSF46894 145 207 2.21E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 SMART SM00421 144 201 2.1E-23 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 PANTHER PTHR26402:SF151 2 207 1.5E-70 T 26-04-2016 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 SUPERFAMILY SSF52172 2 163 5.98E-32 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 9.0E-24 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 PANTHER PTHR26402 2 207 1.5E-70 T 26-04-2016 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 Gene3D G3DSA:3.40.50.2300 2 152 2.6E-34 T 26-04-2016 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 Gene3D G3DSA:1.10.10.10 153 207 4.0E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 SMART SM00448 2 114 2.2E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.6E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.6E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS00175 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.6E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 Gene3D G3DSA:3.40.630.30 118 240 3.9E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 112 3.6E-4 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 Pfam PF00583 Acetyltransferase (GNAT) family 177 244 3.1E-7 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 Gene3D G3DSA:3.10.180.10 2 117 3.1E-32 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 SUPERFAMILY SSF54593 4 115 4.97E-24 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS09430 1cd1a4b59d301a14eaa09abbcdaa073e 267 SUPERFAMILY SSF55729 125 257 7.89E-19 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 SUPERFAMILY SSF158442 10 158 3.01E-38 T 26-04-2016 PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 Pfam PF02600 Disulfide bond formation protein DsbB 7 157 3.3E-39 T 26-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 Gene3D G3DSA:1.20.1550.10 3 162 2.3E-45 T 26-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 2 163 22.314 T 26-04-2016 IPR022920 Disulphide bond formation protein DsbB PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 PANTHER PTHR36570 1 163 4.3E-70 T 26-04-2016 PAM18_RS27475 2f5f4f856f1048ee8db01a6971a0dd0a 163 PANTHER PTHR36570:SF1 1 163 4.3E-70 T 26-04-2016 PAM18_RS11900 10140b77b9d2c9248c2e272bb6bd33b5 104 Pfam PF03413 Peptidase propeptide and YPEB domain 43 101 1.7E-10 T 26-04-2016 IPR025711 PepSY domain PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 SUPERFAMILY SSF53686 98 440 5.35E-55 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 109 123 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 398 3.7E-51 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 440 2.6E-240 T 26-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 Gene3D G3DSA:3.40.50.1100 181 440 3.0E-42 T 26-04-2016 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 PANTHER PTHR10314 154 443 5.5E-212 T 26-04-2016 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 PANTHER PTHR10314 23 132 5.5E-212 T 26-04-2016 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 448 258.362 T 26-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 PANTHER PTHR10314:SF9 154 443 5.5E-212 T 26-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PAM18_RS08265 f109707a14599f5ac150b010108b6532 448 PANTHER PTHR10314:SF9 23 132 5.5E-212 T 26-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 SUPERFAMILY SSF46689 32 103 1.44E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 PANTHER PTHR30055:SF2 24 103 2.1E-45 T 26-04-2016 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 83 1.9E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 PANTHER PTHR30055:SF2 122 237 2.1E-45 T 26-04-2016 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Gene3D G3DSA:1.10.357.10 34 235 4.1E-33 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 PANTHER PTHR30055 24 103 2.1E-45 T 26-04-2016 PAM18_RS06315 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 PANTHER PTHR30055 122 237 2.1E-45 T 26-04-2016 PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 PANTHER PTHR23089:SF7 1 142 3.4E-39 T 26-04-2016 PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 PANTHER PTHR23089 1 142 3.4E-39 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 Gene3D G3DSA:3.30.428.10 1 110 2.3E-35 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 PRINTS PR00332 Histidine triad family signature 4 20 5.97E-9 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 PRINTS PR00332 Histidine triad family signature 25 43 5.97E-9 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 PRINTS PR00332 Histidine triad family signature 93 103 5.97E-9 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 SUPERFAMILY SSF54197 1 142 8.35E-36 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 26-04-2016 IPR019808 Histidine triad, conserved site PAM18_RS18415 1bf4e5621f58d770cf24ad4ae09f4136 148 Pfam PF01230 HIT domain 13 106 1.9E-21 T 26-04-2016 IPR001310 Histidine triad (HIT) protein PAM18_RS28515 e94fb5250ff31249fc23ef3170493385 287 PANTHER PTHR10108 32 251 1.3E-28 T 26-04-2016 PAM18_RS28515 e94fb5250ff31249fc23ef3170493385 287 Pfam PF13489 Methyltransferase domain 51 198 2.5E-15 T 26-04-2016 PAM18_RS28515 e94fb5250ff31249fc23ef3170493385 287 Gene3D G3DSA:3.40.50.150 35 208 3.7E-26 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28515 e94fb5250ff31249fc23ef3170493385 287 SUPERFAMILY SSF53335 44 219 5.83E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28515 e94fb5250ff31249fc23ef3170493385 287 PANTHER PTHR10108:SF855 32 251 1.3E-28 T 26-04-2016 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 SUPERFAMILY SSF142695 3 172 1.7E-65 T 26-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 PANTHER PTHR21327:SF14 3 203 6.5E-139 T 26-04-2016 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 1.3E-80 T 26-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 PANTHER PTHR21327 3 203 6.5E-139 T 26-04-2016 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 45.084 T 26-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS04545 94b7971ee5142b3586c40c68840b4c83 205 Pfam PF00925 GTP cyclohydrolase II 6 170 1.1E-67 T 26-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS22100 2a828f0bf9d58c7d49e50a48a32c5831 98 PANTHER PTHR33336 1 88 3.1E-39 T 26-04-2016 PAM18_RS22100 2a828f0bf9d58c7d49e50a48a32c5831 98 Gene3D G3DSA:3.30.70.900 2 83 2.4E-18 T 26-04-2016 PAM18_RS22100 2a828f0bf9d58c7d49e50a48a32c5831 98 SUPERFAMILY SSF54909 3 83 2.02E-17 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS22100 2a828f0bf9d58c7d49e50a48a32c5831 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 4.4E-16 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS22100 2a828f0bf9d58c7d49e50a48a32c5831 98 PANTHER PTHR33336:SF1 1 88 3.1E-39 T 26-04-2016 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 PANTHER PTHR11136 9 428 2.5E-117 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 420 1.7E-92 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 PIRSF PIRSF001563 1 426 1.9E-100 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 PANTHER PTHR11136:SF0 9 428 2.5E-117 T 26-04-2016 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 Gene3D G3DSA:3.40.1190.10 6 283 2.1E-86 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 SUPERFAMILY SSF53623 3 283 5.49E-87 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 Pfam PF08245 Mur ligase middle domain 47 186 2.6E-11 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 Gene3D G3DSA:3.90.190.20 287 423 6.1E-33 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS09510 edd59e90a816a977fbf94caf0895de21 429 SUPERFAMILY SSF53244 286 422 2.75E-26 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 Gene3D G3DSA:1.10.10.10 3 84 7.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 Gene3D G3DSA:3.40.190.10 176 259 2.7E-19 T 26-04-2016 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 SUPERFAMILY SSF53850 91 295 4.49E-46 T 26-04-2016 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 Gene3D G3DSA:3.40.190.10 89 175 5.9E-19 T 26-04-2016 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 PANTHER PTHR30126 3 294 2.9E-195 T 26-04-2016 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 PANTHER PTHR30126:SF36 3 294 2.9E-195 T 26-04-2016 PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 SUPERFAMILY SSF46785 2 112 6.74E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28130 8dce4e38610fa796ffb2c6d0c1fa85f6 297 Pfam PF03466 LysR substrate binding domain 88 293 8.1E-50 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 SMART SM00487 20 227 8.3E-62 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 PANTHER PTHR24031 436 572 3.7E-248 T 26-04-2016 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 PANTHER PTHR24031 1 414 3.7E-248 T 26-04-2016 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 Pfam PF00271 Helicase conserved C-terminal domain 244 344 9.6E-26 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 Gene3D G3DSA:3.40.50.300 1 216 7.1E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 Pfam PF00270 DEAD/DEAH box helicase 25 199 4.8E-46 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 Gene3D G3DSA:3.40.50.300 217 379 4.5E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 PANTHER PTHR24031:SF0 436 572 3.7E-248 T 26-04-2016 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 PANTHER PTHR24031:SF0 1 414 3.7E-248 T 26-04-2016 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 566 50.626 T 26-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 SMART SM00490 263 344 1.6E-32 T 26-04-2016 IPR001650 Helicase, C-terminal PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 SUPERFAMILY SSF52540 80 365 3.4E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02165 1618ac1360bfb98bf31e8a907a095c77 639 SUPERFAMILY SSF52540 24 102 2.92E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 PANTHER PTHR11699:SF97 1 506 0.0 T 26-04-2016 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 Gene3D G3DSA:3.40.309.10 270 469 7.7E-62 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 SUPERFAMILY SSF53720 13 497 3.93E-162 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 Gene3D G3DSA:3.40.605.10 18 269 3.6E-92 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 26-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 2.8E-164 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS04670 59ffd87729a19297fc600d54b4b89233 506 PANTHER PTHR11699 1 506 0.0 T 26-04-2016 PAM18_RS05350 db44a7264eee5b40ef0b9c0322243347 424 Pfam PF00999 Sodium/hydrogen exchanger family 8 409 1.2E-74 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS05350 db44a7264eee5b40ef0b9c0322243347 424 PANTHER PTHR10110:SF86 1 410 5.8E-104 T 26-04-2016 PAM18_RS05350 db44a7264eee5b40ef0b9c0322243347 424 PANTHER PTHR10110 1 410 5.8E-104 T 26-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 PANTHER PTHR33751:SF3 1 215 3.2E-71 T 26-04-2016 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 Pfam PF00034 Cytochrome c 128 213 1.0E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 108 2.6E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 SUPERFAMILY SSF46626 11 112 5.7E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 SUPERFAMILY SSF46626 124 212 1.15E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 PANTHER PTHR33751 1 215 3.2E-71 T 26-04-2016 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 Gene3D G3DSA:1.10.760.10 26 112 3.1E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 PIRSF PIRSF000005 2 215 2.5E-60 T 26-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 PAM18_RS14300 e14a32ecb7f4f8dee1fe188e79c2e959 215 Gene3D G3DSA:1.10.760.10 132 213 4.8E-24 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27030 832608b287aa1812afd6d876e9956008 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 7.5E-125 T 26-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit PAM18_RS27030 832608b287aa1812afd6d876e9956008 427 PANTHER PTHR33362 1 426 3.5E-249 T 26-04-2016 PAM18_RS27030 832608b287aa1812afd6d876e9956008 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 6.7E-149 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS27030 832608b287aa1812afd6d876e9956008 427 PANTHER PTHR33362:SF6 1 426 3.5E-249 T 26-04-2016 PAM18_RS27030 832608b287aa1812afd6d876e9956008 427 PIRSF PIRSF006066 1 427 3.5E-157 T 26-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 PAM18_RS10350 5559bdc47d6a4b689c9b8795436c98fb 60 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 11 60 2.4E-23 T 26-04-2016 IPR012667 Cobalt transporter subunit CbtB, putative PAM18_RS10350 5559bdc47d6a4b689c9b8795436c98fb 60 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 3 60 3.7E-25 T 26-04-2016 IPR012667 Cobalt transporter subunit CbtB, putative PAM18_RS17300 2e84e263cda728ad2320477135b56ab5 126 PANTHER PTHR33993 1 120 4.1E-55 T 26-04-2016 PAM18_RS17300 2e84e263cda728ad2320477135b56ab5 126 PANTHER PTHR33993:SF4 1 120 4.1E-55 T 26-04-2016 PAM18_RS17300 2e84e263cda728ad2320477135b56ab5 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 1.7E-8 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS17300 2e84e263cda728ad2320477135b56ab5 126 Gene3D G3DSA:3.10.180.10 4 120 4.3E-25 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS17300 2e84e263cda728ad2320477135b56ab5 126 SUPERFAMILY SSF54593 4 119 4.97E-21 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 PANTHER PTHR11113 1 361 9.2E-142 T 26-04-2016 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 SUPERFAMILY SSF51556 45 332 2.13E-82 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 SUPERFAMILY SSF51338 334 362 1.03E-6 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 SUPERFAMILY SSF51338 3 44 1.03E-6 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 Gene3D G3DSA:2.30.40.10 4 52 4.5E-4 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 Pfam PF01979 Amidohydrolase family 41 361 6.0E-12 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 Gene3D G3DSA:3.20.20.140 53 334 1.6E-91 T 26-04-2016 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 PIRSF PIRSF038994 3 363 3.5E-96 T 26-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 PANTHER PTHR11113:SF7 1 361 9.2E-142 T 26-04-2016 PAM18_RS06015 6e0b10264c4bd214597de5684e742503 363 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 40 360 1.4E-71 T 26-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 PAM18_RS27765 c3988557fcbad409a3b4d72cd3f2748d 120 Gene3D G3DSA:2.60.120.10 17 118 8.4E-36 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS27765 c3988557fcbad409a3b4d72cd3f2748d 120 SUPERFAMILY SSF51182 16 116 1.11E-20 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS27765 c3988557fcbad409a3b4d72cd3f2748d 120 Pfam PF05899 Protein of unknown function (DUF861) 41 113 8.6E-23 T 26-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 PAM18_RS27765 c3988557fcbad409a3b4d72cd3f2748d 120 PANTHER PTHR40943 1 120 1.1E-59 T 26-04-2016 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PANTHER PTHR10438 5 108 4.7E-39 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.2E-10 T 26-04-2016 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.2E-10 T 26-04-2016 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.2E-10 T 26-04-2016 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PANTHER PTHR10438:SF256 5 108 4.7E-39 T 26-04-2016 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 PIRSF PIRSF000077 2 108 4.0E-46 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 Pfam PF00085 Thioredoxin 5 106 4.5E-35 T 26-04-2016 IPR013766 Thioredoxin domain GO:0045454 PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 SUPERFAMILY SSF52833 3 106 4.89E-40 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 Gene3D G3DSA:3.40.30.10 2 107 1.3E-39 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS27390 2d836068f7e47d29b41c894e372dff5a 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-39 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 206 1.6E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 PANTHER PTHR18901 1 273 1.4E-116 T 26-04-2016 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 SUPERFAMILY SSF56784 10 262 6.79E-57 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 Gene3D G3DSA:3.40.50.1000 107 261 1.5E-30 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 Gene3D G3DSA:3.40.50.1000 9 27 1.5E-30 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 206 6.7E-7 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 141.647 T 26-04-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 PANTHER PTHR18901:SF45 1 273 1.4E-116 T 26-04-2016 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 Gene3D G3DSA:1.10.150.240 28 104 4.3E-36 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS18390 eb48655eb5d56dd4b1e79b3102c0ef74 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 9 259 1.4E-112 T 26-04-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 PAM18_RS27335 c248995ccc40ef19a2b0de25dc07d3a2 152 Pfam PF01878 EVE domain 3 147 1.7E-52 T 26-04-2016 IPR002740 EVE domain PAM18_RS27335 c248995ccc40ef19a2b0de25dc07d3a2 152 Gene3D G3DSA:3.10.590.10 3 147 4.6E-27 T 26-04-2016 IPR002740 EVE domain PAM18_RS27335 c248995ccc40ef19a2b0de25dc07d3a2 152 PANTHER PTHR14087 1 150 2.5E-78 T 26-04-2016 PAM18_RS27335 c248995ccc40ef19a2b0de25dc07d3a2 152 SUPERFAMILY SSF88697 3 151 4.31E-58 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 PANTHER PTHR33603 1 155 1.0E-65 T 26-04-2016 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 PANTHER PTHR33603:SF1 1 155 1.0E-65 T 26-04-2016 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 8.4E-47 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 SUPERFAMILY SSF75217 1 154 2.62E-47 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 7.3E-61 T 26-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.001 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 PIRSF PIRSF004505 1 155 2.2E-41 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 PAM18_RS04760 9ca553b1906a43c621726e0538ecc780 155 Gene3D G3DSA:3.40.1280.10 1 155 4.6E-51 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 SMART SM00346 10 99 2.5E-9 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 PANTHER PTHR30136 2 255 8.2E-61 T 26-04-2016 PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 PANTHER PTHR30136:SF3 2 255 8.2E-61 T 26-04-2016 PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF46785 10 70 3.61E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:1.10.10.10 3 69 4.9E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:3.30.450.40 84 255 8.9E-22 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF55781 85 255 1.41E-19 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS22645 927a9e882bd95010e9b60d22837a786a 256 Pfam PF09339 IclR helix-turn-helix domain 12 60 8.9E-15 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS04420 921d74c9a7d90bcf5d5608dbe359cc7b 496 PIRSF PIRSF006060 1 487 2.9E-65 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS04420 921d74c9a7d90bcf5d5608dbe359cc7b 496 Pfam PF13520 Amino acid permease 16 426 7.4E-32 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS04420 921d74c9a7d90bcf5d5608dbe359cc7b 496 PANTHER PTHR11785:SF319 50 489 0.0 T 26-04-2016 PAM18_RS04420 921d74c9a7d90bcf5d5608dbe359cc7b 496 PANTHER PTHR11785 50 489 0.0 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 SUPERFAMILY SSF54373 175 275 2.47E-46 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 SUPERFAMILY SSF51905 274 389 9.72E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 SUPERFAMILY SSF51905 1 172 9.72E-59 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 Pfam PF01494 FAD binding domain 2 343 2.4E-98 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 Gene3D G3DSA:3.30.9.10 138 299 1.6E-70 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 Gene3D G3DSA:3.30.9.10 352 388 2.3E-4 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 7.4E-222 T 26-04-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PANTHER PTHR13789 1 394 1.5E-233 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PANTHER PTHR13789:SF192 1 394 1.5E-233 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.5E-32 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.5E-32 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 1.5E-32 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.5E-32 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.5E-32 T 26-04-2016 PAM18_RS01225 55361c8d91a85a9d51ec9b40d165e460 394 Gene3D G3DSA:3.50.50.60 1 102 3.2E-10 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21315 269de132e4984288dfd34924becabaf9 472 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS21315 269de132e4984288dfd34924becabaf9 472 PANTHER PTHR11785:SF26 1 456 0.0 T 26-04-2016 PAM18_RS21315 269de132e4984288dfd34924becabaf9 472 PIRSF PIRSF006060 1 469 2.1E-75 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS21315 269de132e4984288dfd34924becabaf9 472 PANTHER PTHR11785 1 456 0.0 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS21315 269de132e4984288dfd34924becabaf9 472 Pfam PF00324 Amino acid permease 19 453 3.2E-114 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS07140 ef7599314c074e7cd695dcd1eda38f94 271 Pfam PF00795 Carbon-nitrogen hydrolase 5 242 4.5E-49 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS07140 ef7599314c074e7cd695dcd1eda38f94 271 Gene3D G3DSA:3.60.110.10 1 252 1.2E-71 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS07140 ef7599314c074e7cd695dcd1eda38f94 271 SUPERFAMILY SSF56317 1 251 5.62E-70 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS07140 ef7599314c074e7cd695dcd1eda38f94 271 PANTHER PTHR23088 1 251 1.7E-74 T 26-04-2016 PAM18_RS03650 29dd16271ce6365b75a677dec1357481 349 PIRSF PIRSF017494 1 349 4.3E-118 T 26-04-2016 IPR010091 Thiazolinyl imide reductase PAM18_RS03650 29dd16271ce6365b75a677dec1357481 349 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 2 332 2.2E-143 T 26-04-2016 IPR010091 Thiazolinyl imide reductase PAM18_RS03650 29dd16271ce6365b75a677dec1357481 349 Gene3D G3DSA:3.40.50.720 3 132 5.3E-7 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03650 29dd16271ce6365b75a677dec1357481 349 SUPERFAMILY SSF51735 13 138 1.93E-13 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS03650 29dd16271ce6365b75a677dec1357481 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 119 4.9E-14 T 26-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 SUPERFAMILY SSF56601 749 1023 2.5E-26 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 Gene3D G3DSA:1.10.3810.10 166 388 6.5E-9 T 26-04-2016 PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 PANTHER PTHR32282 785 952 4.2E-25 T 26-04-2016 PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 SUPERFAMILY SSF53955 171 389 1.27E-9 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 Pfam PF00912 Transglycosylase 162 358 9.4E-26 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 Gene3D G3DSA:3.40.710.10 426 533 7.9E-42 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 Gene3D G3DSA:3.40.710.10 580 680 7.9E-42 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 Gene3D G3DSA:3.40.710.10 847 1007 7.9E-42 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21700 d31b6f496af803289ee6ee820668ddf0 1041 PANTHER PTHR32282:SF11 785 952 4.2E-25 T 26-04-2016 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PANTHER PTHR11596 49 298 1.2E-156 T 26-04-2016 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PANTHER PTHR11596 321 476 1.2E-156 T 26-04-2016 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 ProSitePatterns PS00123 Alkaline phosphatase active site. 125 133 - T 26-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 Pfam PF00245 Alkaline phosphatase 435 473 5.6E-7 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 Pfam PF00245 Alkaline phosphatase 68 433 9.3E-118 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PANTHER PTHR11596:SF5 49 298 1.2E-156 T 26-04-2016 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PANTHER PTHR11596:SF5 321 476 1.2E-156 T 26-04-2016 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 SMART SM00098 69 475 2.1E-186 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 Gene3D G3DSA:3.40.720.10 50 474 2.3E-140 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 SUPERFAMILY SSF53649 40 474 2.45E-134 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 125 140 3.8E-47 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 324 353 3.8E-47 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 225 235 3.8E-47 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 68 88 3.8E-47 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS08580 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 162 182 3.8E-47 T 26-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 PAM18_RS12090 ca47877d37aab3ee5589634c9a30f103 122 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 39 117 1.1E-34 T 26-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 PAM18_RS12090 ca47877d37aab3ee5589634c9a30f103 122 PANTHER PTHR33473 8 122 6.3E-44 T 26-04-2016 PAM18_RS12090 ca47877d37aab3ee5589634c9a30f103 122 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 17 116 29.359 T 26-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PAM18_RS12090 ca47877d37aab3ee5589634c9a30f103 122 SUPERFAMILY SSF54736 37 120 8.37E-33 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAM18_RS12090 ca47877d37aab3ee5589634c9a30f103 122 Gene3D G3DSA:3.30.1390.10 25 121 3.7E-44 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PIRSF PIRSF005419 3 706 8.7E-262 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 Pfam PF00771 FHIPEP family 26 696 8.4E-239 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 704 4.7E-298 T 26-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 26-04-2016 IPR025505 FHIPEP conserved site PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PANTHER PTHR30161:SF2 1 706 0.0 T 26-04-2016 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 3.8E-58 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS17140 105ddee45d06fbc689ce70577ef7a43b 706 PANTHER PTHR30161 1 706 0.0 T 26-04-2016 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 SUPERFAMILY SSF53383 17 393 7.18E-121 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 Gene3D G3DSA:3.90.1150.10 259 394 4.4E-57 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 PANTHER PTHR11808:SF49 3 394 5.7E-216 T 26-04-2016 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 Gene3D G3DSA:3.40.640.10 14 257 2.2E-91 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 391 1.1E-154 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 PANTHER PTHR11808 3 394 5.7E-216 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 PIRSF PIRSF001434 1 394 2.9E-147 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS02025 60252bcb1b8817ac3b19a6c3975c8868 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS12865 3ea7115615d1f1192d1ddfee6e7aebc3 565 Pfam PF01103 Surface antigen 379 562 3.6E-32 T 26-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PAM18_RS12865 3ea7115615d1f1192d1ddfee6e7aebc3 565 Gene3D G3DSA:2.40.160.50 396 562 1.6E-19 T 26-04-2016 PAM18_RS12865 3ea7115615d1f1192d1ddfee6e7aebc3 565 Pfam PF07244 Surface antigen variable number repeat 176 236 1.8E-8 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS12865 3ea7115615d1f1192d1ddfee6e7aebc3 565 PANTHER PTHR12815:SF12 1 565 2.9E-232 T 26-04-2016 PAM18_RS12865 3ea7115615d1f1192d1ddfee6e7aebc3 565 PANTHER PTHR12815 1 565 2.9E-232 T 26-04-2016 PAM18_RS23465 75675904831308b17845e5695b43157e 336 PANTHER PTHR30465:SF0 1 169 2.2E-145 T 26-04-2016 PAM18_RS23465 75675904831308b17845e5695b43157e 336 PANTHER PTHR30465:SF0 190 334 2.2E-145 T 26-04-2016 PAM18_RS23465 75675904831308b17845e5695b43157e 336 Gene3D G3DSA:1.10.3720.10 200 325 2.9E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23465 75675904831308b17845e5695b43157e 336 Gene3D G3DSA:1.10.3720.10 89 163 2.9E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23465 75675904831308b17845e5695b43157e 336 PANTHER PTHR30465 1 169 2.2E-145 T 26-04-2016 PAM18_RS23465 75675904831308b17845e5695b43157e 336 PANTHER PTHR30465 190 334 2.2E-145 T 26-04-2016 PAM18_RS23465 75675904831308b17845e5695b43157e 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 1.3E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23465 75675904831308b17845e5695b43157e 336 SUPERFAMILY SSF161098 89 160 1.5E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23465 75675904831308b17845e5695b43157e 336 SUPERFAMILY SSF161098 197 319 1.5E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28570 24fc046b975bb0ce82c9759f85b0eb58 434 PANTHER PTHR10283 49 429 1.3E-205 T 26-04-2016 PAM18_RS28570 24fc046b975bb0ce82c9759f85b0eb58 434 Pfam PF03600 Citrate transporter 13 377 1.5E-53 T 26-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PAM18_RS28570 24fc046b975bb0ce82c9759f85b0eb58 434 PANTHER PTHR10283:SF87 49 429 1.3E-205 T 26-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PAM18_RS28570 24fc046b975bb0ce82c9759f85b0eb58 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 7.2E-190 T 26-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Pfam PF00873 AcrB/AcrD/AcrF family 9 1014 3.4E-296 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82693 555 652 1.78E-13 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:3.30.2090.10 710 789 2.5E-19 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:3.30.2090.10 187 266 1.3E-14 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:1.10.3850.10 799 1016 1.4E-55 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PANTHER PTHR32063 4 1021 0.0 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82693 141 186 1.99E-23 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82693 272 328 1.99E-23 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:3.30.70.1430 45 146 4.2E-26 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82866 794 1018 2.09E-44 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82693 45 129 4.19E-20 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82866 294 494 8.89E-45 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82714 710 789 6.8E-16 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 SUPERFAMILY SSF82714 187 267 2.62E-15 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PANTHER PTHR32063:SF30 4 1021 0.0 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.4E-60 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:3.30.70.1430 560 646 3.2E-7 T 26-04-2016 PAM18_RS18905 6379d0a6543f5b3815fda2083f3f1305 1036 Gene3D G3DSA:1.20.1640.10 289 502 2.0E-53 T 26-04-2016 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 PANTHER PTHR10422:SF21 2 471 8.0E-302 T 26-04-2016 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 446 1.3E-109 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 SUPERFAMILY SSF81442 11 469 2.09E-118 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 PANTHER PTHR10422 2 471 8.0E-302 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 13 468 1.6E-213 T 26-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS16325 c3d140db5312f2edd1e44a07651acf28 480 Gene3D G3DSA:1.20.210.10 14 470 1.4E-65 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 SMART SM00421 144 201 1.3E-21 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00072 Response regulator receiver domain 4 115 4.7E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 PANTHER PTHR26402:SF151 2 205 6.9E-68 T 26-04-2016 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 SUPERFAMILY SSF52172 2 170 2.85E-30 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 PANTHER PTHR26402 2 205 6.9E-68 T 26-04-2016 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 4.4E-21 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 Gene3D G3DSA:3.40.50.2300 2 119 1.4E-30 T 26-04-2016 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 4.9E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 4.9E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 4.9E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 Gene3D G3DSA:1.10.10.10 120 207 2.5E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 SMART SM00448 2 114 4.0E-30 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09840 a22b6fe9a13172875db428cd5748501a 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 PANTHER PTHR10887 80 106 1.6E-114 T 26-04-2016 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 PANTHER PTHR10887 206 382 1.6E-114 T 26-04-2016 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Gene3D G3DSA:3.40.50.300 414 443 1.9E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Gene3D G3DSA:3.40.50.300 165 379 1.9E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 42 701 54.448 T 26-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Gene3D G3DSA:3.40.50.300 625 676 2.8E-8 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 SUPERFAMILY SSF52540 343 382 1.24E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 SUPERFAMILY SSF52540 521 678 1.24E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 SUPERFAMILY SSF52540 411 442 1.24E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 SUPERFAMILY SSF52540 37 424 1.61E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Pfam PF13604 AAA domain 213 380 1.2E-29 T 26-04-2016 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 35 701 1.6E-221 T 26-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 Pfam PF13538 UvrD-like helicase C-terminal domain 629 676 8.5E-15 T 26-04-2016 IPR027785 UvrD-like helicase C-terminal domain PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 PANTHER PTHR10887:SF351 80 106 1.6E-114 T 26-04-2016 PAM18_RS22350 0223a9609a749b2883891e76f9544c61 721 PANTHER PTHR10887:SF351 206 382 1.6E-114 T 26-04-2016 PAM18_RS22540 48a4d35960f672ec371a7cf52c37752f 523 Pfam PF13559 Domain of unknown function (DUF4129) 442 514 2.0E-5 T 26-04-2016 IPR025403 Domain of unknown function DUF4129 PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 Gene3D G3DSA:3.10.129.10 12 130 3.3E-28 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 Pfam PF03061 Thioesterase superfamily 51 121 1.2E-12 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 PANTHER PTHR12418:SF27 15 129 4.1E-20 T 26-04-2016 PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 SUPERFAMILY SSF54637 11 130 9.53E-28 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 126 1.9E-16 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS20555 0d6c600f7a655279825ee0c288534b13 135 PANTHER PTHR12418 15 129 4.1E-20 T 26-04-2016 PAM18_RS16540 1565da6395c7de07811b9434f3648f95 148 Pfam PF00075 RNase H 5 143 5.6E-52 T 26-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PAM18_RS16540 1565da6395c7de07811b9434f3648f95 148 PANTHER PTHR10642 6 145 1.3E-60 T 26-04-2016 PAM18_RS16540 1565da6395c7de07811b9434f3648f95 148 Gene3D G3DSA:3.30.420.10 4 145 2.9E-63 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS16540 1565da6395c7de07811b9434f3648f95 148 SUPERFAMILY SSF53098 5 143 3.16E-58 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS16540 1565da6395c7de07811b9434f3648f95 148 Hamap MF_00042 Ribonuclease H [rnhA]. 4 148 33.806 T 26-04-2016 IPR022892 Ribonuclease H GO:0004523 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-33 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-21 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-21 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-21 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 Pfam PF01197 Ribosomal protein L31 1 65 8.8E-31 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.851 T 26-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 SUPERFAMILY SSF143800 1 67 5.49E-28 T 26-04-2016 PAM18_RS26410 2728aa6aa959f51dfa169f7dfbbf72b1 71 PANTHER PTHR33280 1 67 3.5E-35 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.30.450.20 80 145 2.5E-8 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SMART SM00382 227 372 1.2E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF01842 ACT domain 3 64 1.8E-8 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF00158 Sigma-54 interaction domain 208 374 1.8E-58 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.30.70.260 2 72 7.7E-11 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF46689 459 514 1.48E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF55785 84 142 3.66E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF55021 2 72 2.33E-9 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.40.50.300 204 380 2.3E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF00989 PAS fold 83 140 1.5E-6 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 469 515 1.7E-21 T 26-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 PANTHER PTHR32071 8 519 5.4E-202 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF52540 207 449 4.9E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 SMART SM00091 82 148 9.6E-9 T 26-04-2016 IPR000014 PAS domain PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:1.10.8.60 386 450 4.1E-21 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:1.10.10.60 459 515 2.2E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 PANTHER PTHR32071:SF3 8 519 5.4E-202 T 26-04-2016 PAM18_RS21280 d8778b5dafb59de1d5bcca8931238f78 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 PANTHER PTHR11695:SF560 129 370 1.9E-216 T 26-04-2016 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 PANTHER PTHR11695:SF560 16 109 1.9E-216 T 26-04-2016 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.40.50.720 191 310 4.0E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SMART SM00829 11 368 2.3E-4 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF51735 161 334 8.0E-48 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 2 185 1.08E-72 T 26-04-2016 IPR011032 GroES-like PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 1.9E-224 T 26-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 2.8E-26 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF00107 Zinc-binding dehydrogenase 198 325 5.3E-27 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.90.180.10 2 190 5.6E-70 T 26-04-2016 IPR011032 GroES-like PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 320 370 5.18E-11 T 26-04-2016 IPR011032 GroES-like PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 PANTHER PTHR11695 129 370 1.9E-216 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS06665 8e9564a9cac7d4e23f9a1af9ecfc7911 370 PANTHER PTHR11695 16 109 1.9E-216 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 PANTHER PTHR11564:SF7 1 439 7.9E-266 T 26-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.20.120.140 2 88 1.8E-35 T 26-04-2016 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 PANTHER PTHR11564 1 439 7.9E-266 T 26-04-2016 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF52540 42 354 5.75E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00962 100 296 2.1E-115 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-21 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00963 1 86 2.1E-35 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF47446 329 433 8.99E-35 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.3E-74 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.471 T 26-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.10.260.30 329 434 5.6E-38 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 432 8.4E-177 T 26-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00382 99 247 3.2E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02978 Signal peptide binding domain 329 430 1.5E-32 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 PAM18_RS06075 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:3.40.50.300 97 297 2.8E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 SUPERFAMILY SSF56322 33 460 1.16E-100 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 PANTHER PTHR11236:SF3 38 460 6.4E-131 T 26-04-2016 PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 108 460 4.0E-122 T 26-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 PANTHER PTHR11236 38 460 6.4E-131 T 26-04-2016 PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 Gene3D G3DSA:3.60.120.10 32 461 2.7E-96 T 26-04-2016 IPR005801 ADC synthase GO:0009058 PAM18_RS03615 9816638cb3ff4b993c4c70b820c9eda8 476 Pfam PF00425 chorismate binding enzyme 200 452 1.5E-73 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF00460 Flagella basal body rod protein 7 34 1.5E-9 T 26-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 PANTHER PTHR30435:SF2 1 146 1.0E-68 T 26-04-2016 PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 PANTHER PTHR30435 1 146 1.0E-68 T 26-04-2016 PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 146 6.5E-49 T 26-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 98 144 2.2E-14 T 26-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAM18_RS20255 be07e366e7fef4b6c911f932c5dccd28 146 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 26-04-2016 IPR019776 Flagellar basal body rod protein, conserved site PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PANTHER PTHR30266 1 137 8.9E-58 T 26-04-2016 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 9.2E-13 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 9.2E-13 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.2E-13 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 26-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 133 6.0E-48 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 SUPERFAMILY SSF81330 13 127 1.7E-35 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.764 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 PANTHER PTHR30266:SF2 1 137 8.9E-58 T 26-04-2016 PAM18_RS24060 3cd39cbf09a56d5ff3cc80ec121ad9f4 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 6.6E-45 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 Gene3D G3DSA:3.40.1030.10 85 322 2.9E-39 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 Pfam PF02885 Glycosyl transferase family, helical bundle domain 22 76 8.7E-18 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 SUPERFAMILY SSF47648 18 78 4.06E-16 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 Pfam PF00591 Glycosyl transferase family, a/b domain 105 249 3.6E-5 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 PANTHER PTHR10515 1 278 8.2E-74 T 26-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 SUPERFAMILY SSF52418 81 324 1.44E-59 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 PAM18_RS12150 679c4968c742f70f55fff4bd144e6d07 327 Gene3D G3DSA:1.20.970.10 18 77 4.8E-19 T 26-04-2016 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 SUPERFAMILY SSF53732 23 591 2.22E-184 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Gene3D G3DSA:3.40.1060.10 227 360 6.3E-36 T 26-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Gene3D G3DSA:3.30.499.10 361 550 4.6E-56 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Gene3D G3DSA:3.20.19.10 609 862 4.7E-64 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 1.6E-150 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Pfam PF00694 Aconitase C-terminal domain 661 792 3.6E-30 T 26-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 26-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 281 294 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 138 151 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 360 374 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 162 170 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 191 204 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 267 280 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 469 482 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 407 418 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PRINTS PR00415 Aconitase family signature 205 220 1.4E-28 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PANTHER PTHR11670 1 681 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PANTHER PTHR11670 725 866 0.0 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PANTHER PTHR11670:SF43 1 681 0.0 T 26-04-2016 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 PANTHER PTHR11670:SF43 725 866 0.0 T 26-04-2016 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 Gene3D G3DSA:3.30.499.10 22 226 2.5E-63 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS21665 7ba8278499e9e885a0875f0e7d99a8c6 868 SUPERFAMILY SSF52016 603 862 7.85E-68 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 170 1.7E-24 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 Gene3D G3DSA:2.40.170.20 281 880 2.0E-101 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 Gene3D G3DSA:2.40.170.20 173 237 2.0E-101 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 SUPERFAMILY SSF56935 43 241 4.27E-107 T 26-04-2016 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 SUPERFAMILY SSF56935 299 347 4.27E-107 T 26-04-2016 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 SUPERFAMILY SSF56935 381 880 4.27E-107 T 26-04-2016 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 Gene3D G3DSA:2.170.130.10 58 172 1.1E-35 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 PANTHER PTHR30069:SF14 27 880 0.0 T 26-04-2016 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 PANTHER PTHR30069 27 880 0.0 T 26-04-2016 PAM18_RS15255 2a0f05b90693a8faae9eae13d41e23b6 880 Pfam PF00593 TonB dependent receptor 566 877 1.4E-35 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 PANTHER PTHR20852 1 452 0.0 T 26-04-2016 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 Gene3D G3DSA:3.30.590.10 118 438 1.6E-92 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF54368 6 113 2.62E-17 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 PANTHER PTHR20852:SF63 1 452 0.0 T 26-04-2016 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 SMART SM01230 114 370 2.5E-112 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 3.6E-111 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 Gene3D G3DSA:3.10.20.70 6 117 6.8E-14 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF55931 114 449 2.35E-106 T 26-04-2016 PAM18_RS01490 d192a601871560b9c600f63d0efd335d 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 26-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 795 25.948 T 26-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 PIRSF PIRSF006076 1 795 8.5E-266 T 26-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Gene3D G3DSA:2.40.160.50 404 659 1.1E-25 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Gene3D G3DSA:2.40.160.50 696 795 1.1E-25 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Pfam PF01103 Surface antigen 447 795 6.5E-97 T 26-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 PANTHER PTHR12815:SF11 691 795 4.1E-276 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 PANTHER PTHR12815:SF11 4 663 4.1E-276 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 PANTHER PTHR12815 691 795 4.1E-276 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 PANTHER PTHR12815 4 663 4.1E-276 T 26-04-2016 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Pfam PF07244 Surface antigen variable number repeat 92 171 1.9E-13 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Pfam PF07244 Surface antigen variable number repeat 347 420 1.7E-15 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Pfam PF07244 Surface antigen variable number repeat 265 343 4.0E-15 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 Pfam PF07244 Surface antigen variable number repeat 175 262 3.0E-18 T 26-04-2016 IPR010827 Surface antigen variable number GO:0019867 PAM18_RS06570 954651bcf142792d12b8a87aad3fa72a 795 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 795 2.5E-266 T 26-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 SMART SM01230 120 376 4.7E-96 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 PANTHER PTHR20852:SF7 15 458 2.1E-152 T 26-04-2016 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 26-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.10.20.70 15 123 2.5E-19 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 PANTHER PTHR20852 15 458 2.1E-152 T 26-04-2016 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 1.8E-109 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF55931 122 456 1.57E-101 T 26-04-2016 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.30.590.10 124 444 1.1E-94 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS01480 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF54368 14 119 3.27E-18 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 SUPERFAMILY SSF55469 100 229 2.14E-7 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 PANTHER PTHR23026:SF61 349 518 1.4E-71 T 26-04-2016 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 PANTHER PTHR23026:SF61 100 121 1.4E-71 T 26-04-2016 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 Pfam PF00881 Nitroreductase family 100 229 4.9E-5 T 26-04-2016 IPR029479 Nitroreductase PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 Gene3D G3DSA:3.40.109.10 100 229 5.1E-5 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 Gene3D G3DSA:3.40.109.10 410 513 1.4E-7 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 SUPERFAMILY SSF55469 416 516 7.57E-8 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 PANTHER PTHR23026 349 518 1.4E-71 T 26-04-2016 PAM18_RS05065 acdd8057b5ec792d6a288e2b90661130 531 PANTHER PTHR23026 100 121 1.4E-71 T 26-04-2016 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 109 137 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Gene3D G3DSA:2.160.10.10 112 210 1.1E-25 T 26-04-2016 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 2.7E-22 T 26-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 12 329 36.398 T 26-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 11 332 4.8E-118 T 26-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Gene3D G3DSA:2.160.10.10 211 344 5.4E-26 T 26-04-2016 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 PANTHER PTHR22572 102 298 7.8E-53 T 26-04-2016 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 PANTHER PTHR22572:SF117 102 298 7.8E-53 T 26-04-2016 PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 SUPERFAMILY SSF51161 35 320 1.07E-80 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 201 219 6.6E-4 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 1.4E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06580 fa842365e7b2beb9198933f71afa70e6 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 5.2E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PANTHER PTHR30587:SF2 4 217 2.4E-152 T 26-04-2016 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PANTHER PTHR30587 4 217 2.4E-152 T 26-04-2016 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 5.5E-69 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 Pfam PF00813 FliP family 14 211 2.0E-68 T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 26-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PAM18_RS17190 606446d6f0c9544df6251f26071fe830 217 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 6.2E-92 T 26-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 PAM18_RS22005 ced3a39057cd9f259f47bde227c613ad 300 Pfam PF00561 alpha/beta hydrolase fold 29 253 5.0E-10 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS22005 ced3a39057cd9f259f47bde227c613ad 300 Gene3D G3DSA:3.40.50.1820 5 272 1.2E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS22005 ced3a39057cd9f259f47bde227c613ad 300 SUPERFAMILY SSF53474 12 272 1.53E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS22005 ced3a39057cd9f259f47bde227c613ad 300 PANTHER PTHR10992 2 274 3.9E-25 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.10 234 298 2.8E-49 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.10 22 110 2.8E-49 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 307 2.3E-149 T 26-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.100 115 233 4.3E-20 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 281 1.0E-63 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 PANTHER PTHR30177:SF6 18 286 1.1E-185 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 PANTHER PTHR30177 18 286 1.1E-185 T 26-04-2016 PAM18_RS28110 358067f3f868811729db1db013ed01f4 312 SUPERFAMILY SSF53850 21 298 3.53E-92 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SUPERFAMILY SSF56112 199 433 2.97E-22 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 Pfam PF07714 Protein tyrosine kinase 205 365 8.2E-11 T 26-04-2016 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0006468 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SUPERFAMILY SSF52058 12 185 1.63E-30 T 26-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 235 - T 26-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00364 103 122 6.9 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00364 148 167 360.0 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00364 171 190 120.0 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00364 35 54 55.0 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00364 128 144 290.0 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 Gene3D G3DSA:3.80.10.10 4 199 1.2E-35 T 26-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155 17 82 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155 105 188 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155 432 444 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155:SF644 17 82 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155:SF644 105 188 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 PANTHER PTHR23155:SF644 432 444 1.7E-84 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 Gene3D G3DSA:1.10.510.10 312 366 1.5E-11 T 26-04-2016 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 Pfam PF12799 Leucine Rich repeats (2 copies) 37 75 1.5E-6 T 26-04-2016 IPR025875 Leucine rich repeat 4 PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00369 104 126 16.0 T 26-04-2016 IPR003591 Leucine-rich repeat, typical subtype PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00369 128 148 70.0 T 26-04-2016 IPR003591 Leucine-rich repeat, typical subtype PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 SMART SM00369 37 58 4.7 T 26-04-2016 IPR003591 Leucine-rich repeat, typical subtype PAM18_RS13075 a8ff1d92b0d64a91571bb3a07e48ea29 446 Gene3D G3DSA:3.30.200.20 200 283 1.5E-6 T 26-04-2016 PAM18_RS11105 937d5361786290e99e0924d5799723ca 99 SUPERFAMILY SSF141371 6 94 2.35E-16 T 26-04-2016 PAM18_RS11105 937d5361786290e99e0924d5799723ca 99 Gene3D G3DSA:2.40.10.220 7 95 3.1E-9 T 26-04-2016 PAM18_RS11105 937d5361786290e99e0924d5799723ca 99 Pfam PF07238 PilZ domain 10 95 3.5E-13 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 Pfam PF01575 MaoC like domain 165 272 3.1E-26 T 26-04-2016 IPR002539 MaoC-like domain PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 Gene3D G3DSA:3.10.129.10 145 279 7.7E-41 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 SUPERFAMILY SSF54637 163 277 7.48E-28 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 Pfam PF13452 N-terminal half of MaoC dehydratase 51 130 7.0E-8 T 26-04-2016 PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 Gene3D G3DSA:3.10.129.10 1 144 2.5E-42 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 SUPERFAMILY SSF54637 9 159 3.16E-38 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20565 6f8808ec33ea5e171163a9bf6d0212c0 288 PANTHER PTHR13078 1 280 1.2E-118 T 26-04-2016 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Gene3D G3DSA:2.60.40.1180 475 559 5.0E-18 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Gene3D G3DSA:3.90.400.10 115 183 1.2E-24 T 26-04-2016 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF51011 477 558 2.72E-17 T 26-04-2016 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Gene3D G3DSA:3.20.20.80 454 467 1.7E-106 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Gene3D G3DSA:3.20.20.80 191 421 1.7E-106 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Gene3D G3DSA:3.20.20.80 17 114 1.7E-106 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 14 559 2.1E-284 T 26-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 PANTHER PTHR10357 11 412 2.7E-286 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 PANTHER PTHR10357 451 586 2.7E-286 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Pfam PF00128 Alpha amylase, catalytic domain 38 396 2.8E-71 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF56112 852 994 7.55E-17 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF56112 724 811 7.55E-17 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF56112 1023 1041 7.55E-17 T 26-04-2016 IPR011009 Protein kinase-like domain PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SMART SM00642 23 427 7.6E-103 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 576 1090 2.9E-162 T 26-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF51445 365 472 2.11E-129 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 SUPERFAMILY SSF51445 12 338 2.11E-129 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 556 3.3E-27 T 26-04-2016 IPR032091 Maltogenic Amylase, C-terminal PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 PANTHER PTHR10357:SF164 11 412 2.7E-286 T 26-04-2016 PAM18_RS14820 a9e71cf6ebf10874eff300ce7d0ea68e 1100 PANTHER PTHR10357:SF164 451 586 2.7E-286 T 26-04-2016 PAM18_RS03855 016ddaa24f0ac7b6625518685481688a 140 SUPERFAMILY SSF54593 23 137 2.42E-14 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS03855 016ddaa24f0ac7b6625518685481688a 140 Gene3D G3DSA:3.10.180.10 28 136 8.8E-12 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS20920 15892a96d6e8860a7d14ae26d4869649 84 Gene3D G3DSA:3.10.510.10 1 84 1.8E-32 T 26-04-2016 IPR023122 NE1680-like domain PAM18_RS20920 15892a96d6e8860a7d14ae26d4869649 84 SUPERFAMILY SSF160766 1 84 1.16E-31 T 26-04-2016 IPR023122 NE1680-like domain PAM18_RS20920 15892a96d6e8860a7d14ae26d4869649 84 Pfam PF09630 Domain of unknown function (DUF2024) 1 80 2.1E-29 T 26-04-2016 IPR018592 Protein of unknown function DUF2024 PAM18_RS13495 832da3aa8987e3513a06271201d24ca2 226 PANTHER PTHR14119 13 209 1.2E-144 T 26-04-2016 PAM18_RS13495 832da3aa8987e3513a06271201d24ca2 226 Gene3D G3DSA:3.40.50.850 12 211 8.1E-43 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS13495 832da3aa8987e3513a06271201d24ca2 226 Pfam PF00857 Isochorismatase family 20 172 6.4E-21 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS13495 832da3aa8987e3513a06271201d24ca2 226 SUPERFAMILY SSF52499 12 209 4.32E-47 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS13495 832da3aa8987e3513a06271201d24ca2 226 PANTHER PTHR14119:SF10 13 209 1.2E-144 T 26-04-2016 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 348 37.05 T 26-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 SUPERFAMILY SSF52733 4 347 2.75E-119 T 26-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 PANTHER PTHR21712:SF4 13 349 3.4E-127 T 26-04-2016 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 PANTHER PTHR21712 13 349 3.4E-127 T 26-04-2016 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 Pfam PF02277 Phosphoribosyltransferase 12 346 5.3E-130 T 26-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 346 2.1E-133 T 26-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 Gene3D G3DSA:1.10.1610.10 2 71 1.1E-30 T 26-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 PAM18_RS19180 5d9a54734436d8e9a33b173f6d7ce54d 351 Gene3D G3DSA:3.40.50.10210 72 329 2.2E-105 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 Gene3D G3DSA:1.20.1250.20 468 488 1.7E-22 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 Gene3D G3DSA:1.20.1250.20 10 184 3.3E-28 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 Gene3D G3DSA:1.20.1250.20 250 420 1.7E-22 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PANTHER PTHR23501:SF65 3 501 2.6E-236 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 Pfam PF07690 Major Facilitator Superfamily 15 404 2.4E-48 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 SUPERFAMILY SSF103473 461 488 1.31E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 SUPERFAMILY SSF103473 3 191 1.31E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 SUPERFAMILY SSF103473 244 414 1.31E-64 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.9E-7 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.9E-7 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 1.9E-7 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 1.9E-7 T 26-04-2016 PAM18_RS19165 7f8220e5ec33b0a59b016397f94e6125 501 PANTHER PTHR23501 3 501 2.6E-236 T 26-04-2016 PAM18_RS07320 2948b49495366dcb20eddfe29ce78519 100 Pfam PF01337 Barstar (barnase inhibitor) 13 90 2.8E-16 T 26-04-2016 IPR000468 Barstar (barnase inhibitor) PAM18_RS07320 2948b49495366dcb20eddfe29ce78519 100 Gene3D G3DSA:3.30.370.10 11 92 1.3E-22 T 26-04-2016 IPR000468 Barstar (barnase inhibitor) PAM18_RS07320 2948b49495366dcb20eddfe29ce78519 100 SUPERFAMILY SSF52038 11 94 3.92E-23 T 26-04-2016 IPR000468 Barstar (barnase inhibitor) PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 Gene3D G3DSA:3.30.1330.20 215 318 7.9E-46 T 26-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 26-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.9E-51 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.9E-51 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.9E-51 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.9E-51 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 SMART SM00865 207 325 3.0E-57 T 26-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PANTHER PTHR30314:SF3 1 392 2.4E-200 T 26-04-2016 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 Gene3D G3DSA:3.40.50.1440 14 214 2.3E-92 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 PANTHER PTHR30314 1 392 2.4E-200 T 26-04-2016 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 SUPERFAMILY SSF55307 204 319 3.89E-42 T 26-04-2016 IPR008280 Tubulin/FtsZ, C-terminal PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 366 37.72 T 26-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 SUPERFAMILY SSF52490 13 208 5.89E-69 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.8E-40 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 SMART SM00864 13 205 1.9E-113 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 26-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 2.6E-127 T 26-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 PAM18_RS22985 2d87df409f24d2eedbde679c72d3b50c 394 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.2E-35 T 26-04-2016 IPR024757 Cell division protein FtsZ, C-terminal PAM18_RS14935 ff9958163888ed337627e3dd176df1ae 453 PIRSF PIRSF029766 7 453 2.0E-199 T 26-04-2016 IPR011228 Uncharacterised conserved protein UCP029766 PAM18_RS14935 ff9958163888ed337627e3dd176df1ae 453 Gene3D G3DSA:2.60.40.1090 275 450 1.4E-7 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS14935 ff9958163888ed337627e3dd176df1ae 453 Pfam PF00419 Fimbrial protein 268 453 6.4E-26 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS14935 ff9958163888ed337627e3dd176df1ae 453 SUPERFAMILY SSF49401 274 451 5.38E-9 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 2.3E-45 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SUPERFAMILY SSF55785 232 361 3.32E-18 T 26-04-2016 IPR000014 PAS domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SMART SM00091 245 311 3.4E-7 T 26-04-2016 IPR000014 PAS domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Gene3D G3DSA:3.30.70.270 375 537 3.6E-55 T 26-04-2016 PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SUPERFAMILY SSF55073 379 537 1.8E-49 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 PANTHER PTHR33121 507 794 1.3E-60 T 26-04-2016 PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SMART SM00052 547 797 2.6E-69 T 26-04-2016 IPR001633 EAL domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 3.0E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 PANTHER PTHR33121:SF10 507 794 1.3E-60 T 26-04-2016 PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Pfam PF00989 PAS fold 251 360 7.0E-12 T 26-04-2016 IPR013767 PAS fold GO:0006355 PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Pfam PF00563 EAL domain 553 792 3.7E-63 T 26-04-2016 IPR001633 EAL domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SMART SM00267 363 535 5.3E-64 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 369 1.1E-14 T 26-04-2016 IPR000014 PAS domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 SUPERFAMILY SSF141868 553 796 4.84E-73 T 26-04-2016 IPR001633 EAL domain PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Gene3D G3DSA:3.30.450.20 232 361 1.8E-17 T 26-04-2016 PAM18_RS21345 bdec90abd2aee9bcda0eda579d3449bd 818 Gene3D G3DSA:3.20.20.450 551 797 2.9E-78 T 26-04-2016 IPR001633 EAL domain PAM18_RS11390 c2e612b2b28a2b79bc8e3023a1df9d59 146 Pfam PF09335 SNARE associated Golgi protein 28 139 1.6E-13 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS11390 c2e612b2b28a2b79bc8e3023a1df9d59 146 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 7 116 6.0E-7 T 26-04-2016 IPR020143 Uncharacterised protein family, RP436 PAM18_RS11390 c2e612b2b28a2b79bc8e3023a1df9d59 146 PANTHER PTHR30353 1 143 1.1E-55 T 26-04-2016 IPR032818 DedA family PAM18_RS11390 c2e612b2b28a2b79bc8e3023a1df9d59 146 PANTHER PTHR30353:SF12 1 143 1.1E-55 T 26-04-2016 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PIRSF PIRSF011271 1 116 1.2E-65 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 Pfam PF05932 Tir chaperone protein (CesT) family 8 116 9.7E-25 T 26-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 SUPERFAMILY SSF69635 5 115 2.9E-40 T 26-04-2016 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 Gene3D G3DSA:3.30.1460.10 3 115 3.9E-44 T 26-04-2016 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 30 51 5.2E-51 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 60 76 5.2E-51 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 97 115 5.2E-51 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 79 97 5.2E-51 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS05560 d6c50fc46c0e3bf471664933b6e34f39 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 5 28 5.2E-51 T 26-04-2016 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 PAM18_RS04405 6fd4db98b842ce61e1a1aea3778830fe 278 PANTHER PTHR10108:SF746 34 240 5.5E-79 T 26-04-2016 PAM18_RS04405 6fd4db98b842ce61e1a1aea3778830fe 278 Gene3D G3DSA:3.40.50.150 54 175 2.7E-10 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS04405 6fd4db98b842ce61e1a1aea3778830fe 278 PANTHER PTHR10108 34 240 5.5E-79 T 26-04-2016 PAM18_RS04405 6fd4db98b842ce61e1a1aea3778830fe 278 SUPERFAMILY SSF53335 47 235 5.33E-13 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 26-04-2016 IPR019972 Ribosomal protein L14P, conserved site PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 Gene3D G3DSA:2.40.150.20 1 122 1.0E-55 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 PANTHER PTHR11761 1 122 1.0E-77 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.6E-58 T 26-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.142 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 SMART SM01374 1 122 4.5E-86 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 6.4E-55 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS03475 0f172d6b2e1dfd324cd372b9538696e4 122 SUPERFAMILY SSF50193 1 122 3.92E-52 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 3.5E-183 T 26-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:3.40.449.10 8 198 7.7E-66 T 26-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 SUPERFAMILY SSF68923 5 199 9.42E-69 T 26-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:3.90.228.20 322 512 1.4E-106 T 26-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 Gene3D G3DSA:3.90.228.20 200 262 1.4E-106 T 26-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 PIRSF PIRSF006294 1 513 4.1E-207 T 26-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 467 3.8E-188 T 26-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 26-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 PANTHER PTHR30031:SF0 6 513 2.6E-274 T 26-04-2016 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 PANTHER PTHR30031 6 513 2.6E-274 T 26-04-2016 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 513 52.372 T 26-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 PAM18_RS27150 55bcc9364615a7e7c92c74a3da160937 513 SUPERFAMILY SSF53795 200 513 5.72E-127 T 26-04-2016 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 PANTHER PTHR10422:SF21 7 469 0.0 T 26-04-2016 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 SUPERFAMILY SSF81442 9 468 3.27E-125 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 1.2E-112 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 1.3E-233 T 26-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 Gene3D G3DSA:1.20.210.10 9 468 4.8E-72 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 PANTHER PTHR10422 7 469 0.0 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17880 d34c1b7ae544d66d6be16d0adfd17204 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 Pfam PF03473 MOSC domain 51 164 1.8E-25 T 26-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 PANTHER PTHR30212:SF2 25 232 4.9E-84 T 26-04-2016 PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 Gene3D G3DSA:2.40.33.20 7 232 3.4E-92 T 26-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 Pfam PF03475 3-alpha domain 175 217 2.3E-13 T 26-04-2016 IPR005163 3-alpha domain PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 SUPERFAMILY SSF50800 8 228 4.13E-76 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS14440 3e63c25a602ed1e1a37023533c2ea178 239 PANTHER PTHR30212 25 232 4.9E-84 T 26-04-2016 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 PANTHER PTHR17224 6 194 3.4E-77 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 26-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.4E-51 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 Gene3D G3DSA:3.40.50.1470 5 192 3.0E-67 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 3.3E-62 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 34.945 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 SUPERFAMILY SSF53178 5 191 1.57E-67 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PAM18_RS24370 9bdb13d2d4f8b63348e9de38646de5aa 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 26-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 SUPERFAMILY SSF55073 221 410 1.21E-61 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 Pfam PF05230 MASE2 domain 19 108 2.8E-29 T 26-04-2016 IPR007894 MASE2 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 Gene3D G3DSA:3.30.70.1230 223 410 2.0E-56 T 26-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 PANTHER PTHR11920 178 414 1.2E-115 T 26-04-2016 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 PANTHER PTHR11920 430 447 1.2E-115 T 26-04-2016 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 SMART SM00044 188 398 2.0E-34 T 26-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 PANTHER PTHR11920:SF341 178 414 1.2E-115 T 26-04-2016 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 PANTHER PTHR11920:SF341 430 447 1.2E-115 T 26-04-2016 PAM18_RS08995 5f5d7dd8be1201a42b37927629da7d8e 463 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 407 1.2E-39 T 26-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 PAM18_RS26505 220f9db024411c491c35c7a95727a011 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 22.946 T 26-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PAM18_RS26505 220f9db024411c491c35c7a95727a011 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 5.8E-22 T 26-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PAM18_RS26505 220f9db024411c491c35c7a95727a011 82 PANTHER PTHR33162 1 60 5.0E-17 T 26-04-2016 PAM18_RS26505 220f9db024411c491c35c7a95727a011 82 Pfam PF02416 mttA/Hcf106 family 6 52 2.8E-14 T 26-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 SUPERFAMILY SSF53056 1 202 4.32E-73 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 26-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 Pfam PF00484 Carbonic anhydrase 37 187 5.9E-50 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 PANTHER PTHR11002:SF20 1 208 5.7E-137 T 26-04-2016 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 SMART SM00947 30 193 3.6E-65 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 Gene3D G3DSA:3.40.1050.10 2 198 7.0E-76 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS24465 adcdc37346100db5f9d39e883bc36f1f 215 PANTHER PTHR11002 1 208 5.7E-137 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 SUPERFAMILY SSF52540 11 235 1.25E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 SUPERFAMILY SSF52540 266 498 6.99E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 Pfam PF12698 ABC-2 family transporter protein 570 908 2.5E-43 T 26-04-2016 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 Pfam PF00005 ABC transporter 291 434 3.2E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 Pfam PF00005 ABC transporter 25 171 8.8E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 SMART SM00382 33 264 2.7E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 SMART SM00382 299 490 1.0E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 PANTHER PTHR24220 10 274 2.0E-270 T 26-04-2016 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 PANTHER PTHR24220 290 394 2.0E-270 T 26-04-2016 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 PANTHER PTHR24220:SF388 10 274 2.0E-270 T 26-04-2016 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 PANTHER PTHR24220:SF388 290 394 2.0E-270 T 26-04-2016 PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 Gene3D G3DSA:3.40.50.300 10 238 1.9E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS27345 8848a51b0df00aeb0a6da4bbe20b8e08 916 Gene3D G3DSA:3.40.50.300 270 499 1.2E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 Gene3D G3DSA:1.20.1250.20 16 213 1.2E-39 T 26-04-2016 PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 SUPERFAMILY SSF103473 14 418 7.85E-57 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 PIRSF PIRSF002808 5 435 1.3E-78 T 26-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 PANTHER PTHR11662 10 422 4.4E-150 T 26-04-2016 PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 PANTHER PTHR11662:SF141 10 422 4.4E-150 T 26-04-2016 PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 Pfam PF07690 Major Facilitator Superfamily 27 387 4.4E-41 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19860 184258d6ae4e2a91177722985c186e25 444 Gene3D G3DSA:1.20.1250.20 231 423 1.8E-30 T 26-04-2016 PAM18_RS17640 ed8d6c99c7e1ee84b1949d7848c5a4be 344 Pfam PF04909 Amidohydrolase 32 334 6.5E-12 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS17640 ed8d6c99c7e1ee84b1949d7848c5a4be 344 SUPERFAMILY SSF51556 32 334 1.91E-23 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS17640 ed8d6c99c7e1ee84b1949d7848c5a4be 344 Gene3D G3DSA:3.20.20.140 30 336 6.1E-30 T 26-04-2016 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 Gene3D G3DSA:1.10.10.60 291 338 6.7E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 Pfam PF12833 Helix-turn-helix domain 262 339 2.7E-18 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 213 6.0E-44 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 SMART SM00342 256 338 4.0E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 PANTHER PTHR11019:SF52 131 178 4.9E-47 T 26-04-2016 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 PANTHER PTHR11019:SF52 223 339 4.9E-47 T 26-04-2016 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 PANTHER PTHR11019 131 178 4.9E-47 T 26-04-2016 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 PANTHER PTHR11019 223 339 4.9E-47 T 26-04-2016 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 Gene3D G3DSA:1.10.10.60 239 279 9.0E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11660 b7904277f0329ded0a7a2e6925da178e 339 SUPERFAMILY SSF46689 291 338 2.9E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 SUPERFAMILY SSF46689 211 256 1.43E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.1E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.1E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 Gene3D G3DSA:2.60.120.10 19 83 7.7E-12 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 PANTHER PTHR11019:SF98 1 264 1.1E-137 T 26-04-2016 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 PANTHER PTHR11019 1 264 1.1E-137 T 26-04-2016 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 SMART SM00342 174 256 3.6E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 SUPERFAMILY SSF51182 16 183 1.54E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 Gene3D G3DSA:1.10.10.60 211 258 8.0E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 Pfam PF02311 AraC-like ligand binding domain 21 99 6.4E-11 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 Pfam PF12833 Helix-turn-helix domain 180 256 7.5E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS22375 437e48f2c6cc6e64c9166cc3139f2c8c 267 Gene3D G3DSA:1.10.10.60 157 210 2.3E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS16990 13dadabc237d556a4f4bc110156c5c3b 243 Gene3D G3DSA:3.60.20.10 2 201 3.0E-19 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS16990 13dadabc237d556a4f4bc110156c5c3b 243 Pfam PF00227 Proteasome subunit 4 182 5.6E-9 T 26-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 PAM18_RS16990 13dadabc237d556a4f4bc110156c5c3b 243 SUPERFAMILY SSF56235 2 237 1.42E-36 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS16990 13dadabc237d556a4f4bc110156c5c3b 243 PIRSF PIRSF009120 1 242 3.2E-106 T 26-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 PANTHER PTHR30450:SF5 1 237 1.2E-179 T 26-04-2016 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 206 2.4E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 SUPERFAMILY SSF161098 17 217 4.19E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 Gene3D G3DSA:1.10.3720.10 16 226 1.6E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 PANTHER PTHR30450 1 237 1.2E-179 T 26-04-2016 PAM18_RS10455 944634fcd3b84aae49989bf8cab20294 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.4E-15 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 PANTHER PTHR10681 2 173 2.1E-64 T 26-04-2016 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 6.1E-57 T 26-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 Gene3D G3DSA:3.40.30.10 8 175 7.4E-42 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 Pfam PF08534 Redoxin 37 160 1.6E-20 T 26-04-2016 IPR013740 Redoxin GO:0016491 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 PANTHER PTHR10681:SF107 2 173 2.1E-64 T 26-04-2016 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS18685 327b7cf53491387287d7ed280d7ac94c 180 SUPERFAMILY SSF52833 41 173 5.27E-38 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 447 34.528 T 26-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 PANTHER PTHR23135 1 448 1.1E-166 T 26-04-2016 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF53623 100 303 2.62E-52 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 445 9.8E-118 T 26-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.40.50.720 11 96 2.8E-17 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.40.1190.10 98 305 2.5E-62 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 380 1.3E-7 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF53244 305 447 7.1E-47 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Gene3D G3DSA:3.90.190.20 307 444 5.3E-47 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 Pfam PF08245 Mur ligase middle domain 114 285 5.1E-26 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 PANTHER PTHR23135:SF2 1 448 1.1E-166 T 26-04-2016 PAM18_RS23020 486b2a5939f7e849db1b825e4a12af5a 448 SUPERFAMILY SSF51984 11 97 5.62E-15 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.9E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 SUPERFAMILY SSF53850 89 292 5.61E-38 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:3.40.190.10 91 174 3.1E-22 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 PANTHER PTHR30537:SF5 1 290 1.1E-111 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 Pfam PF03466 LysR substrate binding domain 89 291 6.2E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 PANTHER PTHR30537 1 290 1.1E-111 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:1.10.10.10 1 82 8.8E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 Gene3D G3DSA:3.40.190.10 175 259 3.7E-18 T 26-04-2016 PAM18_RS15325 3f831da70fed69da57c13e8d267bdf2e 300 SUPERFAMILY SSF46785 1 111 3.97E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 Gene3D G3DSA:3.40.190.10 118 216 2.9E-26 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 SMART SM00062 30 259 9.9E-74 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 256 1.2E-81 T 26-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 PANTHER PTHR18966:SF152 18 256 2.7E-60 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 Gene3D G3DSA:3.40.190.10 28 116 2.3E-43 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 Gene3D G3DSA:3.40.190.10 218 261 2.3E-43 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 SUPERFAMILY SSF53850 13 260 4.21E-66 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 PANTHER PTHR18966 18 256 2.7E-60 T 26-04-2016 PAM18_RS05445 f2cc1f1fde9468a35b85bbcb1a245031 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 2.6E-62 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 PANTHER PTHR11746 119 190 8.1E-15 T 26-04-2016 PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 SUPERFAMILY SSF52972 2 187 3.66E-59 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 Gene3D G3DSA:3.90.950.10 2 190 2.0E-66 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 Hamap MF_00528 Septum formation protein Maf [maf]. 3 192 33.669 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 Pfam PF02545 Maf-like protein 4 187 4.2E-54 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 186 3.5E-53 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS23340 186b550de5a0be2015a33e4785959d4c 201 PIRSF PIRSF006305 1 194 1.2E-49 T 26-04-2016 IPR003697 Maf-like protein GO:0005737 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 548 1.9E-50 T 26-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 SUPERFAMILY SSF54373 212 307 2.86E-37 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.6E-7 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 Gene3D G3DSA:3.50.50.60 6 283 4.0E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 SUPERFAMILY SSF54862 451 551 9.11E-29 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 SUPERFAMILY SSF51905 308 449 5.19E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 SUPERFAMILY SSF51905 5 212 5.19E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 9.4E-7 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 9.4E-7 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 Gene3D G3DSA:3.30.70.20 494 537 9.3E-4 T 26-04-2016 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 PANTHER PTHR10617:SF107 2 474 3.9E-250 T 26-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 PAM18_RS10310 6088bd3454162d8714711ae6cae2ee06 551 PANTHER PTHR10617 2 474 3.9E-250 T 26-04-2016 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 SUPERFAMILY SSF56266 14 402 2.49E-131 T 26-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 PANTHER PTHR23100:SF0 16 405 4.2E-174 T 26-04-2016 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 Gene3D G3DSA:3.60.70.12 11 276 1.0E-92 T 26-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 153.127 T 26-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 0.0 T 26-04-2016 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 PANTHER PTHR23100 16 405 4.2E-174 T 26-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 405 5.9E-114 T 26-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS22960 564362d3dfe65e4556fe467bb034416f 405 Pfam PF01960 ArgJ family 21 405 1.6E-136 T 26-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 Gene3D G3DSA:3.30.70.560 4 154 1.4E-54 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 4.4E-36 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 PANTHER PTHR20941 3 158 1.4E-70 T 26-04-2016 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 1.5E-43 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 SUPERFAMILY SSF55083 3 157 9.68E-54 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS24760 7307f4201708fed743e1e4b620d7ec3e 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 PANTHER PTHR21266:SF19 4 341 1.1E-139 T 26-04-2016 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 26-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 SUPERFAMILY SSF55961 117 343 5.26E-58 T 26-04-2016 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 SUPERFAMILY SSF50022 3 110 4.19E-32 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 PANTHER PTHR21266 4 341 1.1E-139 T 26-04-2016 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 Gene3D G3DSA:2.102.10.10 5 117 5.6E-31 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS25665 2f98cd4a712bfd315f5233e09acb9335 351 Pfam PF00355 Rieske [2Fe-2S] domain 7 86 1.7E-17 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 165 4.6E-50 T 26-04-2016 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 Gene3D G3DSA:3.40.30.10 86 165 8.2E-8 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 26-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 PANTHER PTHR10371 7 165 4.5E-113 T 26-04-2016 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 PANTHER PTHR10371:SF7 7 165 4.5E-113 T 26-04-2016 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 SUPERFAMILY SSF52833 15 165 3.58E-48 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 165 1.5E-48 T 26-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PAM18_RS11995 0a7ff7c8344ae362a8862645147ce861 166 PIRSF PIRSF000216 3 166 4.1E-52 T 26-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 289 2.9E-88 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 SUPERFAMILY SSF160240 213 286 1.57E-8 T 26-04-2016 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 PANTHER PTHR11562:SF17 5 295 4.3E-102 T 26-04-2016 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 Gene3D G3DSA:1.20.1510.10 14 208 1.1E-58 T 26-04-2016 IPR027469 Cation efflux protein transmembrane domain PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 Pfam PF01545 Cation efflux family 19 208 3.0E-45 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 PANTHER PTHR11562 5 295 4.3E-102 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PAM18_RS02010 22e083329ea532558f91a9122437bb21 299 SUPERFAMILY SSF161111 13 209 1.22E-55 T 26-04-2016 PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 2.1E-52 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 PANTHER PTHR11941:SF86 1 262 1.1E-101 T 26-04-2016 PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 PANTHER PTHR11941 1 262 1.1E-101 T 26-04-2016 PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 SUPERFAMILY SSF52096 5 263 2.38E-69 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 Gene3D G3DSA:3.90.226.10 7 204 6.3E-57 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10635 cb11aa693c1160eb583e9cee18e9355f 264 Gene3D G3DSA:1.10.12.10 208 263 1.3E-11 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 8.9E-142 T 26-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 SUPERFAMILY SSF160544 238 343 7.32E-32 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PANTHER PTHR30531:SF3 1 345 5.1E-233 T 26-04-2016 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PANTHER PTHR30531 1 345 5.1E-233 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 341 1.7E-110 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 Gene3D G3DSA:3.40.1690.10 212 345 1.6E-51 T 26-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 1.0E-42 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 1.0E-42 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 1.0E-42 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 1.0E-42 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS17205 a222e131592587797db889e33a18b8e8 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 1.0E-42 T 26-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 Pfam PF12796 Ankyrin repeats (3 copies) 36 124 3.2E-10 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 SMART SM00248 95 124 34.0 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 SMART SM00248 29 58 620.0 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 SMART SM00248 128 157 45.0 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 SMART SM00248 62 91 0.11 T 26-04-2016 IPR002110 Ankyrin repeat GO:0005515 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 SUPERFAMILY SSF48403 33 165 1.87E-29 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 PANTHER PTHR24198 37 164 3.8E-28 T 26-04-2016 PAM18_RS24050 32c86de96b7fe6c7d271b30fb2f6b939 180 Gene3D G3DSA:1.25.40.20 37 164 7.5E-31 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS22755 e722d69a2720a16970fecd8aeb71f5c1 352 Gene3D G3DSA:3.40.50.720 5 142 1.8E-18 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22755 e722d69a2720a16970fecd8aeb71f5c1 352 PANTHER PTHR12286 1 219 1.5E-56 T 26-04-2016 PAM18_RS22755 e722d69a2720a16970fecd8aeb71f5c1 352 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 123 2.5E-11 T 26-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 PAM18_RS22755 e722d69a2720a16970fecd8aeb71f5c1 352 SUPERFAMILY SSF51735 4 136 7.17E-17 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 PANTHER PTHR24220 2 231 1.3E-106 T 26-04-2016 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SUPERFAMILY SSF52540 10 225 1.45E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 3.0E-142 T 26-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Pfam PF00005 ABC transporter 19 162 6.8E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Gene3D G3DSA:2.40.50.100 284 357 7.2E-19 T 26-04-2016 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Gene3D G3DSA:3.40.50.300 18 226 5.1E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SMART SM00382 25 212 2.1E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 Pfam PF03459 TOBE domain 297 359 7.6E-18 T 26-04-2016 IPR005116 Transport-associated OB, type 1 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 SUPERFAMILY SSF50331 239 360 4.54E-21 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS16300 4754661b0b5e8f7c84d007ec4dd6dc4a 361 PANTHER PTHR24220:SF284 2 231 1.3E-106 T 26-04-2016 PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 Pfam PF02515 CoA-transferase family III 5 383 6.6E-133 T 26-04-2016 IPR003673 CoA-transferase family III GO:0003824 PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 PANTHER PTHR24023:SF593 1 394 6.4E-36 T 26-04-2016 PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 SUPERFAMILY SSF89796 3 407 6.28E-147 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 Gene3D G3DSA:3.40.50.10540 2 227 4.7E-121 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 Gene3D G3DSA:3.40.50.10540 316 407 4.7E-121 T 26-04-2016 IPR023606 CoA-transferase family III domain PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 Gene3D G3DSA:3.30.1540.10 233 315 8.0E-36 T 26-04-2016 PAM18_RS02250 bbb23a1c919cdd27d5ec49ba225a7775 407 PANTHER PTHR24023 1 394 6.4E-36 T 26-04-2016 PAM18_RS06915 06df3e7da7778ee3a75f3e2d6a78856f 400 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 6 396 6.1E-119 T 26-04-2016 IPR006444 Phage major capsid protein, HK97 PAM18_RS06915 06df3e7da7778ee3a75f3e2d6a78856f 400 SUPERFAMILY SSF56563 108 399 1.7E-75 T 26-04-2016 PAM18_RS06915 06df3e7da7778ee3a75f3e2d6a78856f 400 Pfam PF05065 Phage capsid family 114 396 1.3E-82 T 26-04-2016 IPR024455 Phage capsid PAM18_RS12470 2941000d21a44e2346dbb47c03c57e38 94 Gene3D G3DSA:3.40.50.10400 2 93 2.3E-8 T 26-04-2016 IPR027269 Hypothetical PA1492 domain PAM18_RS12470 2941000d21a44e2346dbb47c03c57e38 94 Pfam PF14359 Domain of unknown function (DUF4406) 4 93 9.9E-31 T 26-04-2016 IPR025518 Protein of unknown function DUF4406 PAM18_RS12470 2941000d21a44e2346dbb47c03c57e38 94 SUPERFAMILY SSF52309 2 93 4.27E-26 T 26-04-2016 PAM18_RS07695 37d32de6f9ab58c576340a51f7bffc39 180 Pfam PF01872 RibD C-terminal domain 93 166 9.1E-14 T 26-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PAM18_RS07695 37d32de6f9ab58c576340a51f7bffc39 180 Gene3D G3DSA:3.40.430.10 3 173 4.3E-38 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS07695 37d32de6f9ab58c576340a51f7bffc39 180 SUPERFAMILY SSF53597 3 174 1.09E-38 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain PAM18_RS07695 37d32de6f9ab58c576340a51f7bffc39 180 PANTHER PTHR38011 3 176 9.7E-13 T 26-04-2016 PAM18_RS22770 7a47e2274047e77e782c39d110faf632 200 PANTHER PTHR30086 1 199 4.7E-91 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS22770 7a47e2274047e77e782c39d110faf632 200 PANTHER PTHR30086:SF0 1 199 4.7E-91 T 26-04-2016 PAM18_RS22770 7a47e2274047e77e782c39d110faf632 200 Pfam PF01810 LysE type translocator 15 198 4.7E-42 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS05315 bde2bea6e450346d8840c2b2a8b26a63 731 PANTHER PTHR30509:SF6 10 267 0.0 T 26-04-2016 PAM18_RS05315 bde2bea6e450346d8840c2b2a8b26a63 731 PANTHER PTHR30509:SF6 340 680 0.0 T 26-04-2016 PAM18_RS05315 bde2bea6e450346d8840c2b2a8b26a63 731 PANTHER PTHR30509 10 267 0.0 T 26-04-2016 PAM18_RS05315 bde2bea6e450346d8840c2b2a8b26a63 731 PANTHER PTHR30509 340 680 0.0 T 26-04-2016 PAM18_RS05315 bde2bea6e450346d8840c2b2a8b26a63 731 Pfam PF04632 Fusaric acid resistance protein family 30 714 4.1E-216 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 Gene3D G3DSA:1.10.10.10 8 87 5.5E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 PANTHER PTHR39168 1 232 4.1E-74 T 26-04-2016 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 SMART SM00418 9 88 1.6E-11 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 Pfam PF12840 Helix-turn-helix domain 10 68 6.9E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 SUPERFAMILY SSF46785 9 86 5.45E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 7.5E-5 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 7.5E-5 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 7.5E-5 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PAM18_RS01395 2b87055d5d513308337bbae22802b913 232 PANTHER PTHR39168:SF1 1 232 4.1E-74 T 26-04-2016 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 4.7E-6 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 4.7E-6 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 124 139 4.7E-6 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 Pfam PF12019 Type II transport protein GspH 44 138 1.7E-5 T 26-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 28 1.1E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.5E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 149 5.8E-57 T 26-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 PAM18_RS22265 b0213e09aa05ff90d8a45ef7f1ce1b60 149 SUPERFAMILY SSF54523 9 81 8.63E-11 T 26-04-2016 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 74 2.1E-7 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 293 8.2E-36 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 137 157 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 PANTHER PTHR11941:SF54 109 292 7.5E-72 T 26-04-2016 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 PANTHER PTHR11941:SF54 6 73 7.5E-72 T 26-04-2016 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 PANTHER PTHR11941 109 292 7.5E-72 T 26-04-2016 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 PANTHER PTHR11941 6 73 7.5E-72 T 26-04-2016 PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 Gene3D G3DSA:3.90.226.10 5 74 7.7E-66 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 Gene3D G3DSA:3.90.226.10 109 270 7.7E-66 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 SUPERFAMILY SSF52096 115 295 8.23E-62 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS11295 dedf23baddc91a9132825cf43bbe4120 322 SUPERFAMILY SSF52096 6 81 8.23E-62 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 31.087 T 26-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF57716 108 145 2.71E-10 T 26-04-2016 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.6E-52 T 26-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.2E-11 T 26-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 PANTHER PTHR33823:SF2 5 145 1.2E-67 T 26-04-2016 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 PANTHER PTHR33823 5 145 1.2E-67 T 26-04-2016 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF109635 11 106 6.8E-34 T 26-04-2016 PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 26-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 7.6E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS24730 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 7.6E-5 T 26-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 PANTHER PTHR11695 12 255 6.6E-162 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 PANTHER PTHR11695 281 390 6.6E-162 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 SMART SM00829 7 379 0.0013 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 Gene3D G3DSA:3.90.180.10 1 180 2.1E-50 T 26-04-2016 IPR011032 GroES-like PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 Pfam PF00107 Zinc-binding dehydrogenase 189 257 1.2E-11 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 4.5E-26 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 SUPERFAMILY SSF50129 1 193 2.28E-54 T 26-04-2016 IPR011032 GroES-like PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 Gene3D G3DSA:3.40.50.720 181 325 1.4E-39 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 PANTHER PTHR11695:SF585 12 255 6.6E-162 T 26-04-2016 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 PANTHER PTHR11695:SF585 281 390 6.6E-162 T 26-04-2016 PAM18_RS14790 3388433ab25cb56c9bdebc5670166d01 415 SUPERFAMILY SSF51735 156 346 3.81E-63 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS20705 54dc750d71f8b287720bedec09e0b47c 203 SUPERFAMILY SSF49401 27 203 7.46E-21 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS20705 54dc750d71f8b287720bedec09e0b47c 203 Gene3D G3DSA:2.60.40.1090 26 203 5.0E-22 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS20705 54dc750d71f8b287720bedec09e0b47c 203 PANTHER PTHR33420:SF8 1 203 6.3E-75 T 26-04-2016 PAM18_RS20705 54dc750d71f8b287720bedec09e0b47c 203 PANTHER PTHR33420 1 203 6.3E-75 T 26-04-2016 PAM18_RS20705 54dc750d71f8b287720bedec09e0b47c 203 Pfam PF00419 Fimbrial protein 28 202 4.8E-13 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 SMART SM00382 88 237 2.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PANTHER PTHR11638:SF18 55 371 2.1E-104 T 26-04-2016 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 Gene3D G3DSA:1.10.8.60 288 353 9.6E-18 T 26-04-2016 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PANTHER PTHR11638 55 371 2.1E-104 T 26-04-2016 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 SUPERFAMILY SSF52540 47 346 3.68E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 278 347 5.0E-18 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 SMART SM01086 276 368 6.3E-18 T 26-04-2016 IPR019489 Clp ATPase, C-terminal PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 137 155 4.0E-29 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 170 188 4.0E-29 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 204 218 4.0E-29 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 92 110 4.0E-29 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 Gene3D G3DSA:3.40.50.300 259 287 2.4E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 Gene3D G3DSA:3.40.50.300 56 219 2.4E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08225 ad35633cbd21e21faae4173599293e94 371 Pfam PF07724 AAA domain (Cdc48 subfamily) 87 269 1.9E-39 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.7E-32 T 26-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 233 564 2.3E-133 T 26-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 SUPERFAMILY SSF52794 121 218 3.31E-34 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02378 Phosphotransferase system, EIIC 246 508 5.2E-18 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 Gene3D G3DSA:3.40.50.2300 1 98 7.2E-23 T 26-04-2016 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 Gene3D G3DSA:3.40.50.2300 119 219 6.5E-39 T 26-04-2016 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 PANTHER PTHR30505:SF0 1 563 7.9E-269 T 26-04-2016 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 SUPERFAMILY SSF52794 2 97 6.93E-24 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 PANTHER PTHR30505 1 563 7.9E-269 T 26-04-2016 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.2E-10 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PAM18_RS07345 8d9edbeea53f262929ca66f4cc3f10a6 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 209 1.3E-17 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PAM18_RS05630 34d593df41a0579ed2b519c2551bf28a 372 PANTHER PTHR33529 2 372 1.7E-117 T 26-04-2016 PAM18_RS05630 34d593df41a0579ed2b519c2551bf28a 372 PANTHER PTHR33529:SF2 2 372 1.7E-117 T 26-04-2016 PAM18_RS05630 34d593df41a0579ed2b519c2551bf28a 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 352 1.9E-73 T 26-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 PAM18_RS05630 34d593df41a0579ed2b519c2551bf28a 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 353 1.1E-118 T 26-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 146 168 1.3E-16 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 176 191 1.3E-16 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 PRINTS PR01021 OMPA domain signature 191 207 1.3E-16 T 26-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 Gene3D G3DSA:3.30.1330.60 135 246 1.4E-41 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 Pfam PF14346 Domain of unknown function (DUF4398) 14 113 2.6E-14 T 26-04-2016 IPR025511 Domain of unknown function DUF4398 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 SUPERFAMILY SSF103088 137 246 2.62E-39 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 PANTHER PTHR30128 111 257 4.6E-52 T 26-04-2016 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 ProSitePatterns PS01068 OmpA-like domain. 178 222 - T 26-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 PAM18_RS06350 c7334f30fe12aef19c01ffca434295a5 261 Pfam PF00691 OmpA family 145 240 1.1E-24 T 26-04-2016 IPR006665 OmpA-like domain PAM18_RS17445 9d17b354a5928fe5cbbfb8fb25bbaebe 115 PANTHER PTHR28620 3 114 1.5E-28 T 26-04-2016 PAM18_RS17445 9d17b354a5928fe5cbbfb8fb25bbaebe 115 SUPERFAMILY SSF51316 1 113 1.05E-28 T 26-04-2016 IPR011057 Mss4-like PAM18_RS17445 9d17b354a5928fe5cbbfb8fb25bbaebe 115 Gene3D G3DSA:3.90.1590.10 1 102 1.4E-19 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS17445 9d17b354a5928fe5cbbfb8fb25bbaebe 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 109 2.0E-7 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS21885 9b11d97108dc99a0057aa58285102703 505 PANTHER PTHR35342:SF4 2 505 3.3E-303 T 26-04-2016 PAM18_RS21885 9b11d97108dc99a0057aa58285102703 505 PANTHER PTHR35342 2 505 3.3E-303 T 26-04-2016 PAM18_RS21885 9b11d97108dc99a0057aa58285102703 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 6.8E-138 T 26-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane PAM18_RS00170 1d0db0760aea54d3d05f1a3a9deb1e49 121 Gene3D G3DSA:1.20.120.160 4 99 2.9E-13 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00170 1d0db0760aea54d3d05f1a3a9deb1e49 121 Pfam PF01627 Hpt domain 24 99 4.1E-9 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS00170 1d0db0760aea54d3d05f1a3a9deb1e49 121 SUPERFAMILY SSF47226 9 111 1.19E-15 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 2.0E-13 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 PANTHER PTHR11260 2 209 3.1E-71 T 26-04-2016 PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 197 6.5E-11 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 PANTHER PTHR11260:SF178 2 209 3.1E-71 T 26-04-2016 PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 Gene3D G3DSA:3.40.30.10 1 83 3.1E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 Gene3D G3DSA:1.20.1050.10 84 201 1.8E-52 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 SUPERFAMILY SSF52833 1 84 3.77E-21 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20485 3aa0ccab2cde426f5e9209579330dd18 213 SUPERFAMILY SSF47616 78 207 7.78E-39 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS07945 b5c1ff88c2e0021dd5cd6417ed66d951 270 PANTHER PTHR31350 18 254 2.1E-33 T 26-04-2016 PAM18_RS07945 b5c1ff88c2e0021dd5cd6417ed66d951 270 Pfam PF13369 Transglutaminase-like superfamily 37 184 2.5E-36 T 26-04-2016 IPR032698 Protein SirB1, N-terminal PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 SUPERFAMILY SSF56059 40 201 5.5E-19 T 26-04-2016 PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 SUPERFAMILY SSF56059 231 279 5.5E-19 T 26-04-2016 PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 Gene3D G3DSA:3.30.1490.20 68 99 2.2E-5 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 Gene3D G3DSA:3.30.470.20 237 285 1.7E-4 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 4 323 6.8E-170 T 26-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein PAM18_RS16825 4b572ebd887d4e43507177d405708550 327 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 293 2.6E-103 T 26-04-2016 PAM18_RS14435 ff140cadc6643ec08f08f58652b0d5a7 198 Gene3D G3DSA:1.10.530.10 43 134 4.3E-6 T 26-04-2016 PAM18_RS14435 ff140cadc6643ec08f08f58652b0d5a7 198 SUPERFAMILY SSF53955 12 158 1.2E-23 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 Pfam PF00892 EamA-like transporter family 151 279 2.9E-13 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 Pfam PF00892 EamA-like transporter family 8 138 9.0E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 SUPERFAMILY SSF103481 42 139 5.1E-13 T 26-04-2016 PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 SUPERFAMILY SSF103481 182 282 1.83E-15 T 26-04-2016 PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 PANTHER PTHR22911 9 276 7.9E-69 T 26-04-2016 PAM18_RS25315 876dee3149c1b10cd6d0ce88bf97d77c 284 PANTHER PTHR22911:SF6 9 276 7.9E-69 T 26-04-2016 PAM18_RS24980 acb062b262094ee3000666a2e93a01e9 560 PANTHER PTHR30003 2 560 0.0 T 26-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PAM18_RS24980 acb062b262094ee3000666a2e93a01e9 560 Pfam PF02652 L-lactate permease 16 548 1.3E-203 T 26-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PAM18_RS24980 acb062b262094ee3000666a2e93a01e9 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 552 3.4E-221 T 26-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PAM18_RS24980 acb062b262094ee3000666a2e93a01e9 560 PANTHER PTHR30003:SF6 2 560 0.0 T 26-04-2016 PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 SUPERFAMILY SSF51735 3 251 2.86E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 SUPERFAMILY SSF51735 291 326 2.86E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 PANTHER PTHR10366:SF446 2 328 2.5E-185 T 26-04-2016 PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 Gene3D G3DSA:3.90.25.10 216 324 1.4E-7 T 26-04-2016 PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 PANTHER PTHR10366 2 328 2.5E-185 T 26-04-2016 PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 Gene3D G3DSA:3.40.50.720 2 215 8.0E-25 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24150 6e66bac66aa256a23a9779c2ae6321f6 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 225 7.3E-15 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 PANTHER PTHR10422 7 466 0.0 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 1.6E-106 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 Gene3D G3DSA:1.20.210.10 11 464 5.7E-67 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 PANTHER PTHR10422:SF21 7 466 0.0 T 26-04-2016 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 SUPERFAMILY SSF81442 10 466 2.62E-119 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 463 6.5E-219 T 26-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS04105 4f87b0a55f8b3356b9052c454afb6f74 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 Gene3D G3DSA:3.40.190.10 98 183 7.0E-17 T 26-04-2016 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 Pfam PF03466 LysR substrate binding domain 93 300 3.1E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 SUPERFAMILY SSF46785 7 92 1.18E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 Gene3D G3DSA:1.10.10.10 8 90 3.9E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 PANTHER PTHR30537 1 301 3.0E-199 T 26-04-2016 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 PANTHER PTHR30537:SF29 1 301 3.0E-199 T 26-04-2016 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 SUPERFAMILY SSF53850 94 303 1.99E-38 T 26-04-2016 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 9.6E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13505 992d5a40bbb545bba374026a6c66f404 312 Gene3D G3DSA:3.40.190.10 184 268 4.7E-19 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:1.10.150.20 244 326 9.0E-37 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF47789 250 323 8.89E-26 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 PANTHER PTHR32108 1 329 6.7E-153 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:3.30.1360.10 10 65 8.2E-10 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:2.170.120.12 66 176 1.4E-41 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 SMART SM00662 23 233 2.2E-109 T 26-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 7.3E-110 T 26-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 4.3E-25 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 1.0E-36 T 26-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 PANTHER PTHR32108:SF0 1 329 6.7E-153 T 26-04-2016 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.081 T 26-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF56553 53 177 7.59E-42 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.1E-23 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 307 3.1E-24 T 26-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF55257 6 53 4.51E-30 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS03550 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF55257 178 232 4.51E-30 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.2E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PANTHER PTHR24322 12 184 3.0E-40 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 9.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.0E-11 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 1.4E-48 T 26-04-2016 PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 SUPERFAMILY SSF51735 7 250 1.12E-66 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13010 a491ca8c0765f2bec44794e3056127d6 253 Gene3D G3DSA:3.40.50.720 1 250 1.8E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PANTHER PTHR11686:SF8 1 538 1.1E-271 T 26-04-2016 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PANTHER PTHR11686 1 538 1.1E-271 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 SUPERFAMILY SSF56235 7 535 1.74E-174 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 151 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 45 70 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 237 253 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 132 1.7E-41 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS00830 120eceadefab5d8ea320581a9441f195 538 Pfam PF01019 Gamma-glutamyltranspeptidase 38 532 5.2E-159 T 26-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 PAM18_RS15975 5c0f693efab0bcdc14a79109a81824d2 1281 PANTHER PTHR23304:SF96 74 1274 0.0 T 26-04-2016 PAM18_RS15975 5c0f693efab0bcdc14a79109a81824d2 1281 Pfam PF02514 CobN/Magnesium Chelatase 124 1177 1.0E-279 T 26-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 PAM18_RS15975 5c0f693efab0bcdc14a79109a81824d2 1281 PANTHER PTHR23304 74 1274 0.0 T 26-04-2016 PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 PANTHER PTHR30349:SF20 67 331 8.0E-23 T 26-04-2016 PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 Gene3D G3DSA:1.10.150.130 68 165 5.9E-7 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 PANTHER PTHR30349 67 331 8.0E-23 T 26-04-2016 PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 SUPERFAMILY SSF56349 67 334 4.71E-47 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 Gene3D G3DSA:1.10.443.10 173 337 1.9E-32 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS12455 6c0ddcfb130644cf7017c6ccfd0e5946 342 Pfam PF00589 Phage integrase family 185 333 2.3E-15 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 SUPERFAMILY SSF56349 104 289 7.06E-52 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 293 3.5E-109 T 26-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 SUPERFAMILY SSF47823 4 96 3.92E-19 T 26-04-2016 IPR010998 Integrase, Lambda-type, N-terminal PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 Gene3D G3DSA:1.10.150.130 3 97 6.8E-28 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 PANTHER PTHR30349 1 303 2.3E-163 T 26-04-2016 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 Pfam PF00589 Phage integrase family 111 277 2.4E-42 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 Gene3D G3DSA:1.10.443.10 110 284 1.0E-51 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 291 35.76 T 26-04-2016 IPR023009 Tyrosine recombinase XerC/XerD PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 PANTHER PTHR30349:SF17 1 303 2.3E-163 T 26-04-2016 PAM18_RS27595 8e78ea234ec2e0840c3c2a9c781b9801 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 3.1E-24 T 26-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 PANTHER PTHR11839:SF12 2 186 3.2E-91 T 26-04-2016 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 PANTHER PTHR11839 2 186 3.2E-91 T 26-04-2016 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 Gene3D G3DSA:3.90.79.10 4 178 1.2E-39 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 Pfam PF00293 NUDIX domain 48 164 1.5E-13 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 SUPERFAMILY SSF55811 5 179 3.11E-36 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS27065 9dd0f07f794d904695c5e3f3ca6a8717 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 454 1.5E-65 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 SUPERFAMILY SSF56601 27 469 9.4E-92 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 2.2E-22 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 370 384 2.2E-22 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 432 445 2.2E-22 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 68 87 2.2E-22 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 295 317 2.2E-22 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 454 1.3E-86 T 26-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Gene3D G3DSA:3.40.710.10 241 473 3.6E-63 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PANTHER PTHR30023:SF0 21 464 2.3E-95 T 26-04-2016 PAM18_RS09830 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PANTHER PTHR30023 21 464 2.3E-95 T 26-04-2016 PAM18_RS15350 a0e0280684b8e364bb3c1381909ccda8 317 PANTHER PTHR30273:SF4 3 317 1.1E-203 T 26-04-2016 PAM18_RS15350 a0e0280684b8e364bb3c1381909ccda8 317 Pfam PF04773 FecR protein 114 205 1.6E-21 T 26-04-2016 IPR006860 FecR protein PAM18_RS15350 a0e0280684b8e364bb3c1381909ccda8 317 PIRSF PIRSF018266 1 317 2.6E-84 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS15350 a0e0280684b8e364bb3c1381909ccda8 317 Pfam PF16220 Domain of unknown function (DUF4880) 11 50 3.0E-12 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS15350 a0e0280684b8e364bb3c1381909ccda8 317 PANTHER PTHR30273 3 317 1.1E-203 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS13890 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Gene3D G3DSA:1.10.3720.10 5 265 9.1E-55 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13890 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 PANTHER PTHR32243 2 277 2.9E-140 T 26-04-2016 PAM18_RS13890 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 PANTHER PTHR32243:SF11 2 277 2.9E-140 T 26-04-2016 PAM18_RS13890 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 270 8.5E-13 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13890 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 SUPERFAMILY SSF161098 7 277 3.08E-63 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS17130 91b3b2839b4b0328e0dec4cae7487664 98 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 98 5.8E-42 T 26-04-2016 IPR009863 Type III secretion protein, LcrG PAM18_RS17130 91b3b2839b4b0328e0dec4cae7487664 98 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 98 4.0E-18 T 26-04-2016 IPR009863 Type III secretion protein, LcrG PAM18_RS17130 91b3b2839b4b0328e0dec4cae7487664 98 Pfam PF07216 LcrG protein 9 98 8.8E-42 T 26-04-2016 IPR009863 Type III secretion protein, LcrG PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 Pfam PF13380 CoA binding domain 25 130 3.1E-12 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 SUPERFAMILY SSF52210 292 454 3.11E-22 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 PANTHER PTHR33303 456 694 2.1E-222 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 PANTHER PTHR33303 2 435 2.1E-222 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 Pfam PF13549 ATP-grasp domain 478 693 3.0E-50 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 285 7.3E-34 T 26-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 SMART SM00881 9 99 1.5E-18 T 26-04-2016 IPR003781 CoA-binding GO:0048037 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 Gene3D G3DSA:3.40.50.261 126 285 6.7E-13 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 SUPERFAMILY SSF52210 129 286 2.88E-32 T 26-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 SUPERFAMILY SSF51735 6 127 9.46E-23 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 SUPERFAMILY SSF56059 481 692 2.36E-30 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 PANTHER PTHR33303:SF3 456 694 2.1E-222 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 PANTHER PTHR33303:SF3 2 435 2.1E-222 T 26-04-2016 PAM18_RS26045 790563ed1d998a334b8fe13063b4ecf0 696 Gene3D G3DSA:3.40.50.720 2 125 1.0E-18 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Gene3D G3DSA:1.20.1600.10 354 468 7.1E-93 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Gene3D G3DSA:1.20.1600.10 144 316 7.1E-93 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Gene3D G3DSA:1.20.1600.10 59 94 7.1E-93 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 467 4.3E-104 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Pfam PF02321 Outer membrane efflux protein 68 256 2.9E-23 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Pfam PF02321 Outer membrane efflux protein 287 465 3.6E-21 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 SUPERFAMILY SSF56954 11 470 4.32E-102 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Gene3D G3DSA:2.20.200.10 126 143 2.4E-12 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 Gene3D G3DSA:2.20.200.10 317 350 2.4E-12 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 PANTHER PTHR30203 1 472 1.6E-215 T 26-04-2016 PAM18_RS13110 8b81b1bbb45039627321de48b0794fb2 472 PANTHER PTHR30203:SF13 1 472 1.6E-215 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 SUPERFAMILY SSF53756 54 413 1.05E-17 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417 190 421 9.9E-147 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417 1 111 9.9E-147 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417 130 140 9.9E-147 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 210 1.1E-67 T 26-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417:SF2 190 421 9.9E-147 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417:SF2 1 111 9.9E-147 T 26-04-2016 PAM18_RS26100 8785732510f01ea48fa4bf539ef5ea67 425 PANTHER PTHR23417:SF2 130 140 9.9E-147 T 26-04-2016 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 210 8.2E-88 T 26-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 PANTHER PTHR30586 1 222 6.8E-135 T 26-04-2016 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 3.2E-62 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 212 26.741 T 26-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 PANTHER PTHR30586:SF0 1 222 6.8E-135 T 26-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 PAM18_RS07585 55d11b3a8bb74315ec37aba1ebac66f4 238 PIRSF PIRSF006102 2 220 9.4E-74 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 Pfam PF13646 HEAT repeats 14 97 7.9E-14 T 26-04-2016 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 Pfam PF13646 HEAT repeats 231 315 6.8E-15 T 26-04-2016 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 Pfam PF13646 HEAT repeats 139 221 8.1E-14 T 26-04-2016 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 PANTHER PTHR12697:SF18 14 317 1.1E-49 T 26-04-2016 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 PANTHER PTHR12697 14 317 1.1E-49 T 26-04-2016 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 Gene3D G3DSA:1.25.40.70 240 286 9.3E-4 T 26-04-2016 IPR001263 Phosphoinositide 3-kinase, accessory (PIK) domain PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SUPERFAMILY SSF48371 69 310 1.57E-44 T 26-04-2016 IPR016024 Armadillo-type fold GO:0005488 PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 86 115 490.0 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 242 271 1.3E-5 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 273 302 1.1 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 117 146 3.8 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 211 240 6.6E-8 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 23 52 0.5 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 55 84 0.0023 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 148 177 4.5 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 SMART SM00567 E-Z type HEAT repeats 180 209 0.74 T 26-04-2016 IPR004155 PBS lyase HEAT-like repeat PAM18_RS14120 8f80723a6faedc1a2b63fbf3be23d7ae 321 Gene3D G3DSA:1.25.10.10 19 239 4.5E-42 T 26-04-2016 IPR011989 Armadillo-like helical PAM18_RS02510 313631a2bcea798ca3ccc4c6448dd2e9 325 SUPERFAMILY SSF50891 180 304 2.73E-9 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS02510 313631a2bcea798ca3ccc4c6448dd2e9 325 Pfam PF02626 Allophanate hydrolase subunit 2 25 298 1.5E-82 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS02510 313631a2bcea798ca3ccc4c6448dd2e9 325 Gene3D G3DSA:2.40.100.10 195 311 5.0E-8 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS02510 313631a2bcea798ca3ccc4c6448dd2e9 325 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 320 1.9E-76 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS02510 313631a2bcea798ca3ccc4c6448dd2e9 325 SMART SM00797 24 312 2.4E-132 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:1.10.3850.10 822 1036 1.2E-60 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:1.10.3850.10 283 507 9.4E-51 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 26-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82714 192 274 9.29E-17 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PANTHER PTHR32063:SF24 2 1046 0.0 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:3.30.70.1430 42 142 3.7E-30 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:3.30.70.1430 578 662 2.7E-5 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82866 299 506 2.62E-34 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82693 155 191 8.72E-21 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82693 277 333 8.72E-21 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82866 814 1039 1.19E-58 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82693 42 127 5.49E-24 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.5E-20 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:3.30.2090.10 192 275 1.3E-17 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Gene3D G3DSA:3.30.2090.10 726 816 1.7E-18 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 Pfam PF00873 AcrB/AcrD/AcrF family 5 1035 0.0 T 26-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82714 726 817 3.79E-17 T 26-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 PANTHER PTHR32063 2 1046 0.0 T 26-04-2016 PAM18_RS12985 d8b16f1557586523997fc2b11a3afe2b 1051 SUPERFAMILY SSF82693 579 668 2.56E-6 T 26-04-2016 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 26-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 PANTHER PTHR10993 7 205 8.2E-74 T 26-04-2016 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 158 3.5E-5 T 26-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.338 T 26-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 Gene3D G3DSA:3.90.1550.10 7 202 6.8E-68 T 26-04-2016 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-12 T 26-04-2016 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 PIRSF PIRSF016262 4 215 1.7E-57 T 26-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 194 1.4E-62 T 26-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 PAM18_RS04795 1b70f9ba5b30266d5b24540a1af2b04c 217 SUPERFAMILY SSF55681 6 204 2.57E-66 T 26-04-2016 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-22 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 SUPERFAMILY SSF46785 3 87 1.85E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 PANTHER PTHR30346:SF6 1 300 5.0E-103 T 26-04-2016 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 Gene3D G3DSA:3.40.190.10 91 179 2.4E-19 T 26-04-2016 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 PANTHER PTHR30346 1 300 5.0E-103 T 26-04-2016 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 SUPERFAMILY SSF53850 91 299 1.59E-29 T 26-04-2016 PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 Gene3D G3DSA:1.10.10.10 1 87 1.7E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 Pfam PF03466 LysR substrate binding domain 88 296 8.2E-35 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS05900 72338dea9ce8024516e1dc41b733fc3b 302 Gene3D G3DSA:3.40.190.10 180 271 5.2E-22 T 26-04-2016 PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 PIRSF PIRSF005739 1 332 1.7E-37 T 26-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 SUPERFAMILY SSF53335 95 330 1.03E-39 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 PANTHER PTHR11746 12 322 5.3E-73 T 26-04-2016 PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 Pfam PF00891 O-methyltransferase 100 316 1.1E-30 T 26-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 Pfam PF16864 Dimerisation domain 12 86 1.0E-6 T 26-04-2016 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 SUPERFAMILY SSF46785 10 89 5.99E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 Gene3D G3DSA:3.40.50.150 97 331 3.7E-46 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 Gene3D G3DSA:1.10.10.10 7 96 1.4E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03725 24b73a6436f94f486a8eabcbd4235c21 334 PANTHER PTHR11746:SF63 12 322 5.3E-73 T 26-04-2016 PAM18_RS06740 91a7e3457f86219f450196cee700e3c9 91 Pfam PF13223 Protein of unknown function (DUF4031) 3 75 3.5E-27 T 26-04-2016 IPR025109 Domain of unknown function DUF4031 PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 10 350 2.6E-141 T 26-04-2016 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 PANTHER PTHR11516:SF1 9 357 3.9E-129 T 26-04-2016 PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 Gene3D G3DSA:3.40.50.970 7 350 2.7E-120 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 Pfam PF00676 Dehydrogenase E1 component 38 323 1.1E-80 T 26-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 PANTHER PTHR11516 9 357 3.9E-129 T 26-04-2016 PAM18_RS07955 e7edc1714465531caff5aa11f3a7f7e3 365 SUPERFAMILY SSF52518 30 352 2.36E-96 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 PANTHER PTHR23508 12 426 1.7E-217 T 26-04-2016 PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 Gene3D G3DSA:1.20.1250.20 245 425 3.8E-19 T 26-04-2016 PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 SUPERFAMILY SSF103473 22 426 5.23E-74 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 Pfam PF07690 Major Facilitator Superfamily 39 293 6.2E-31 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 PANTHER PTHR23508:SF18 12 426 1.7E-217 T 26-04-2016 PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 Gene3D G3DSA:1.20.1250.20 30 220 2.1E-36 T 26-04-2016 PAM18_RS15030 6c5c6b7eeea3b33f3b878880450dbd3e 427 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 PANTHER PTHR21631:SF4 1 297 2.1E-163 T 26-04-2016 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 ProSitePatterns PS00161 Isocitrate lyase signature. 123 128 - T 26-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 PANTHER PTHR21631 1 297 2.1E-163 T 26-04-2016 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 293 8.3E-133 T 26-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 294 50.146 T 26-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 Gene3D G3DSA:3.20.20.60 8 289 2.1E-100 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 20 256 1.0E-49 T 26-04-2016 PAM18_RS21655 38cc00a7ec4f736b2784af4e77e9e71e 298 SUPERFAMILY SSF51621 8 292 2.02E-100 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 27.195 T 26-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 2.9E-42 T 26-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 SUPERFAMILY SSF53137 4 114 3.71E-52 T 26-04-2016 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 116 1.1E-42 T 26-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 Gene3D G3DSA:3.30.420.100 24 116 4.3E-39 T 26-04-2016 PAM18_RS03505 11101dbfa1b79ca4a696cbadbf89c886 116 PANTHER PTHR12899 4 116 2.8E-43 T 26-04-2016 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 26-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 Gene3D G3DSA:1.20.1300.10 2 124 1.2E-41 T 26-04-2016 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 PANTHER PTHR10978 1 124 4.0E-70 T 26-04-2016 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 SUPERFAMILY SSF81343 2 124 6.05E-35 T 26-04-2016 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 3.1E-32 T 26-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 PANTHER PTHR10978:SF4 1 124 4.0E-70 T 26-04-2016 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 26-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 4.0E-42 T 26-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 PAM18_RS17760 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 PIRSF PIRSF000178 1 124 1.6E-31 T 26-04-2016 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 SUPERFAMILY SSF81338 10 260 6.8E-78 T 26-04-2016 IPR023271 Aquaporin-like PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PANTHER PTHR19139 8 277 3.9E-97 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 ProSitePatterns PS00221 MIP family signature. 69 77 - T 26-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 Gene3D G3DSA:1.20.1080.10 8 261 7.5E-87 T 26-04-2016 IPR023271 Aquaporin-like PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PANTHER PTHR19139:SF100 8 277 3.9E-97 T 26-04-2016 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 Pfam PF00230 Major intrinsic protein 9 251 1.7E-65 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 TIGRFAM TIGR00861 MIP: MIP family channel proteins 16 252 2.4E-67 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 237 257 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 187 209 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 12 31 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 154 172 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 88 107 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS07225 c2bb0ec36c26e68c2b7e8f7aaf581019 279 PRINTS PR00783 Major intrinsic protein family signature 51 75 9.8E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 SUPERFAMILY SSF51905 33 335 1.74E-42 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 Gene3D G3DSA:3.50.50.60 24 123 1.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 Gene3D G3DSA:3.50.50.60 177 257 1.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 Gene3D G3DSA:3.50.50.60 350 400 1.0E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 PANTHER PTHR13847:SF196 1 429 9.0E-157 T 26-04-2016 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 PANTHER PTHR13847 1 429 9.0E-157 T 26-04-2016 PAM18_RS02705 75b887a770d5c7532b5e41d29cf5ad66 429 Pfam PF01266 FAD dependent oxidoreductase 35 385 4.1E-52 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS17810 3ad6f514089fdd6be5f922ff5202e325 381 PANTHER PTHR40697 1 377 2.8E-280 T 26-04-2016 PAM18_RS17810 3ad6f514089fdd6be5f922ff5202e325 381 SUPERFAMILY SSF111331 91 174 1.35E-5 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PAM18_RS17810 3ad6f514089fdd6be5f922ff5202e325 381 PIRSF PIRSF016907 2 371 6.0E-146 T 26-04-2016 IPR011386 Putative ATP-NAD kinase PAM18_RS17810 3ad6f514089fdd6be5f922ff5202e325 381 Pfam PF01513 ATP-NAD kinase 5 367 9.0E-68 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 PAM18_RS17810 3ad6f514089fdd6be5f922ff5202e325 381 PANTHER PTHR40697:SF1 1 377 2.8E-280 T 26-04-2016 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 SMART SM01004 10 333 3.6E-240 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 1.0E-136 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PANTHER PTHR11458 8 337 2.9E-184 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.5E-56 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 SUPERFAMILY SSF51569 8 334 4.54E-141 T 26-04-2016 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 PIRSF PIRSF001415 3 336 1.9E-149 T 26-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 26-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27405 27bc69e242d58c65006826ba0f00904c 337 Gene3D G3DSA:3.20.20.70 8 335 4.3E-149 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 1.2E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 PANTHER PTHR30614:SF18 15 230 6.9E-104 T 26-04-2016 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 Gene3D G3DSA:1.10.3720.10 23 224 6.5E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 119 7.5E-31 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 PANTHER PTHR30614 15 230 6.9E-104 T 26-04-2016 PAM18_RS01570 94398c5607dac139baba3951eb548f12 230 SUPERFAMILY SSF161098 22 213 3.4E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:1.10.10.10 2 87 1.2E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 PANTHER PTHR30537 1 297 2.8E-206 T 26-04-2016 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF53850 89 299 1.71E-37 T 26-04-2016 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF03466 LysR substrate binding domain 88 297 5.9E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF46785 3 87 1.14E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 PANTHER PTHR30537:SF23 1 297 2.8E-206 T 26-04-2016 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 176 264 4.0E-15 T 26-04-2016 PAM18_RS18385 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 92 175 2.2E-21 T 26-04-2016 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 PANTHER PTHR18919:SF109 27 332 2.5E-112 T 26-04-2016 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 242 328 3.1E-27 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 Gene3D G3DSA:3.40.47.10 164 334 1.8E-42 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 PANTHER PTHR18919 27 332 2.5E-112 T 26-04-2016 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 Gene3D G3DSA:3.40.47.10 6 163 1.5E-52 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 SUPERFAMILY SSF53901 8 329 2.33E-57 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20670 a970ce6c59f8619f987d9392b9ec1697 337 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 188 4.1E-23 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Pfam PF08279 HTH domain 2 54 5.5E-9 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Pfam PF03099 Biotin/lipoate A/B protein ligase family 89 201 2.7E-18 T 26-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 PANTHER PTHR12835 1 310 4.3E-87 T 26-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Gene3D G3DSA:2.30.30.100 263 311 5.8E-14 T 26-04-2016 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Gene3D G3DSA:1.10.10.10 2 58 7.7E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 SUPERFAMILY SSF50037 263 309 1.28E-6 T 26-04-2016 IPR008988 Transcriptional repressor, C-terminal PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 1 309 32.829 T 26-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 73 308 1.0E-56 T 26-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 SUPERFAMILY SSF55681 71 260 9.32E-60 T 26-04-2016 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 Gene3D G3DSA:3.30.930.10 71 259 1.0E-63 T 26-04-2016 PAM18_RS03320 109065eddfa0fb1e0406d12ee49fb343 312 SUPERFAMILY SSF46785 3 55 4.62E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 PANTHER PTHR13847 19 426 3.7E-237 T 26-04-2016 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 27 511 1.2E-217 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 SUPERFAMILY SSF51905 24 354 7.29E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 PANTHER PTHR13847:SF214 19 426 3.7E-237 T 26-04-2016 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 514 6.0E-243 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 23 514 54.957 T 26-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 Gene3D G3DSA:3.50.50.60 27 93 2.7E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07780 e0e02d14807a09f4c8a651fce828041d 523 Gene3D G3DSA:3.50.50.60 168 352 2.7E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 SUPERFAMILY SSF141986 157 304 9.42E-33 T 26-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 SUPERFAMILY SSF52317 14 143 1.37E-37 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 Gene3D G3DSA:3.50.30.60 179 304 4.6E-33 T 26-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 PANTHER PTHR30237 6 307 2.6E-116 T 26-04-2016 PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 PANTHER PTHR30237:SF2 6 307 2.6E-116 T 26-04-2016 PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 Pfam PF02016 LD-carboxypeptidase 18 299 3.3E-61 T 26-04-2016 IPR003507 Peptidase family S66 PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 PIRSF PIRSF028757 13 307 3.4E-87 T 26-04-2016 IPR003507 Peptidase family S66 PAM18_RS27180 e9ff024709ad6366737421405f17ac27 307 Gene3D G3DSA:3.40.50.10740 10 158 3.1E-44 T 26-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 41 290 1.7E-88 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF51735 1161 1360 1.38E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.40.50.720 1375 1589 1.2E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF47336 1650 1719 5.76E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF51735 1375 1600 8.77E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.40.47.10 304 468 1.4E-59 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF08659 KR domain 1377 1553 3.2E-55 T 26-04-2016 IPR013968 Polyketide synthase, ketoreductase domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF55048 697 762 8.11E-10 T 26-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.40.366.10 762 873 1.1E-71 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.40.366.10 566 691 1.1E-71 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.40.47.10 40 303 2.4E-90 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:1.10.1200.10 1664 1718 3.4E-6 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 PANTHER PTHR11712:SF285 41 1720 0.0 T 26-04-2016 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SMART SM00825 Beta-ketoacyl synthase 42 468 2.5E-183 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF00550 Phosphopantetheine attachment site 1667 1718 2.9E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 PANTHER PTHR11712 41 1720 0.0 T 26-04-2016 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF53901 37 411 3.74E-97 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 571 870 6.3E-95 T 26-04-2016 IPR020801 Polyketide synthase, acyl transferase domain PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF00698 Acyl transferase domain 570 889 2.7E-50 T 26-04-2016 IPR014043 Acyl transferase PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 418 528 1.2E-16 T 26-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 298 415 5.4E-40 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 Gene3D G3DSA:3.30.70.250 697 761 5.5E-7 T 26-04-2016 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF52151 763 866 7.32E-64 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SUPERFAMILY SSF52151 569 697 7.32E-64 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS12265 5b0e3092500a8301d9c7090989924ea4 1739 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1377 1555 1.8E-38 T 26-04-2016 PAM18_RS10820 6b3104a55923c31461135cf023b7d039 83 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 3 83 1.9E-12 T 26-04-2016 IPR021793 Major outer membrane lipoprotein Oprl PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 PANTHER PTHR30133:SF2 4 231 6.3E-134 T 26-04-2016 PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 221 9.7E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 Gene3D G3DSA:1.10.3720.10 11 222 1.3E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 SUPERFAMILY SSF161098 11 208 1.74E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 1.7E-17 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS26950 4cf7d99660ae34415f554bbff6a72bcf 231 PANTHER PTHR30133 4 231 6.3E-134 T 26-04-2016 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 Gene3D G3DSA:3.40.640.10 152 363 1.6E-57 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.4E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 SUPERFAMILY SSF46785 10 80 1.06E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 SMART SM00345 17 76 6.4E-18 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 SUPERFAMILY SSF53383 117 472 6.48E-84 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 PANTHER PTHR11751:SF287 96 473 3.4E-275 T 26-04-2016 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 PANTHER PTHR11751 96 473 3.4E-275 T 26-04-2016 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 Gene3D G3DSA:1.10.10.10 10 78 5.7E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 Pfam PF00155 Aminotransferase class I and II 140 392 3.6E-18 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.4E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS01340 79bd40ecc1f6d474f8052b46e063e7f7 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.4E-7 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 SUPERFAMILY SSF56784 2 206 1.68E-28 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 5.5E-48 T 26-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 PANTHER PTHR10000:SF17 1 216 2.2E-109 T 26-04-2016 PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:1.20.1440.100 15 79 3.5E-19 T 26-04-2016 PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 PANTHER PTHR10000 1 216 2.2E-109 T 26-04-2016 PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:3.40.50.1000 80 216 5.9E-46 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 6.8E-31 T 26-04-2016 PAM18_RS08805 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.5E-28 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.0E-86 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206:SF90 469 484 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206:SF90 217 442 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206:SF90 70 82 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206 469 484 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206 217 442 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PANTHER PTHR11206 70 82 5.3E-99 T 26-04-2016 PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 2.0E-164 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 PIRSF PIRSF002869 1 512 3.2E-175 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23790 92863eb17fe7ad27a59701830b7c3b47 512 Pfam PF03023 MviN-like protein 28 476 9.7E-155 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 SUPERFAMILY SSF111369 51 296 7.19E-75 T 26-04-2016 PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 PANTHER PTHR30158:SF3 1 373 7.8E-166 T 26-04-2016 PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 3.4E-12 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 PANTHER PTHR30158 1 373 7.8E-166 T 26-04-2016 PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 Gene3D G3DSA:2.40.50.100 63 96 5.4E-23 T 26-04-2016 PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 Gene3D G3DSA:2.40.50.100 171 205 5.4E-23 T 26-04-2016 PAM18_RS23985 a6880e950e6961dfb49eccdf80b8d8a9 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 370 1.7E-82 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 Gene3D G3DSA:1.20.1250.20 6 186 3.2E-23 T 26-04-2016 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 PANTHER PTHR23502 9 379 1.6E-45 T 26-04-2016 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 SUPERFAMILY SSF103473 1 382 8.24E-40 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 Pfam PF07690 Major Facilitator Superfamily 21 350 1.1E-30 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 PRINTS PR01035 Tetracycline resistance protein signature 301 321 7.8E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 PRINTS PR01035 Tetracycline resistance protein signature 246 266 7.8E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 PRINTS PR01035 Tetracycline resistance protein signature 133 155 7.8E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS20050 d60baa476f3b33b092f9d1e5317b627d 385 PRINTS PR01035 Tetracycline resistance protein signature 18 34 7.8E-5 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PRINTS PR00069 Aldo-keto reductase signature 163 180 2.2E-7 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.2E-7 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PANTHER PTHR11732:SF112 151 345 1.7E-195 T 26-04-2016 PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PANTHER PTHR11732:SF112 1 134 1.7E-195 T 26-04-2016 PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 SUPERFAMILY SSF51430 1 343 3.67E-105 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 Pfam PF00248 Aldo/keto reductase family 16 336 4.8E-66 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 Gene3D G3DSA:3.20.20.100 1 342 4.2E-100 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PANTHER PTHR11732 151 345 1.7E-195 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS23120 4072a3742e054a2053cab002e79514be 345 PANTHER PTHR11732 1 134 1.7E-195 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 Gene3D G3DSA:1.10.10.10 4 87 8.7E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 PANTHER PTHR30537 1 292 9.7E-118 T 26-04-2016 PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 Gene3D G3DSA:3.40.190.10 176 258 9.3E-10 T 26-04-2016 PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 Pfam PF03466 LysR substrate binding domain 88 289 2.8E-45 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 SUPERFAMILY SSF53850 90 291 8.32E-46 T 26-04-2016 PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 Gene3D G3DSA:3.40.190.10 95 175 7.8E-24 T 26-04-2016 PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 SUPERFAMILY SSF46785 5 87 2.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 PANTHER PTHR30537:SF5 1 292 9.7E-118 T 26-04-2016 PAM18_RS14005 37760c147ee7c76a35d552b88e930075 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 2.1E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 PANTHER PTHR12213 4 192 2.0E-82 T 26-04-2016 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 SUPERFAMILY SSF89028 7 186 7.26E-60 T 26-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 Gene3D G3DSA:1.20.1200.10 17 187 1.6E-60 T 26-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 186 2.1E-52 T 26-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 PANTHER PTHR12213:SF0 4 192 2.0E-82 T 26-04-2016 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 Pfam PF01923 Cobalamin adenosyltransferase 8 173 3.1E-56 T 26-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 PAM18_RS22945 d0f4ee5fe7e27e122c7c36b1afcdcfaf 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 186 7.0E-84 T 26-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 36 138 2.09E-10 T 26-04-2016 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 185 286 7.59E-15 T 26-04-2016 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 PANTHER PTHR12715 3 295 3.5E-97 T 26-04-2016 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 PANTHER PTHR12715:SF12 3 295 3.5E-97 T 26-04-2016 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 3 135 2.1E-20 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS22370 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 150 281 1.4E-19 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 SUPERFAMILY SSF53474 198 489 4.16E-36 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 PANTHER PTHR36837 1 559 0.0 T 26-04-2016 PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.2E-65 T 26-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 Gene3D G3DSA:3.40.50.1820 161 529 1.1E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 PANTHER PTHR36837:SF2 1 559 0.0 T 26-04-2016 PAM18_RS26445 96df22e9c333fa08211c677c7c995bd2 559 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 559 0.0 T 26-04-2016 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 Gene3D G3DSA:3.40.50.1820 259 442 7.8E-11 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 Gene3D G3DSA:3.40.50.1820 50 128 7.8E-11 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 SUPERFAMILY SSF53474 50 62 1.58E-8 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 SUPERFAMILY SSF53474 190 328 1.58E-8 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 SUPERFAMILY SSF53474 207 269 1.08E-5 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 SUPERFAMILY SSF53474 311 441 1.08E-5 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18535 e4695bc246ae232680c4ebf8e7a9560d 568 Gene3D G3DSA:3.40.50.1820 192 258 7.9E-9 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 1.3E-24 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.30.360.10 143 351 3.5E-74 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF55347 134 355 3.35E-76 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF51735 1 147 1.16E-54 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 PANTHER PTHR10174:SF116 201 370 2.8E-161 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 PANTHER PTHR10174:SF116 103 179 2.8E-161 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 PIRSF PIRSF000148 1 370 1.8E-64 T 26-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 SMART SM00859 3 122 6.3E-28 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 PANTHER PTHR10174 201 370 2.8E-161 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 PANTHER PTHR10174 103 179 2.8E-161 T 26-04-2016 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.434 T 26-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 4.3E-63 T 26-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 4.3E-197 T 26-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.40.50.720 1 142 5.0E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09480 a8be0c31547178063df844cb7d4d0666 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 26-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 PANTHER PTHR30231 15 222 6.0E-121 T 26-04-2016 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 22 221 1.4E-116 T 26-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 Gene3D G3DSA:3.30.420.10 22 222 1.3E-58 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 PANTHER PTHR30231:SF2 15 222 6.0E-121 T 26-04-2016 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 SUPERFAMILY SSF53098 21 219 3.19E-57 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 SMART SM00479 30 215 7.7E-24 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 Pfam PF00929 Exonuclease 32 206 1.5E-32 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS07505 f35890dc9ed1ff32c385b91bf416066b 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 112.439 T 26-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF55931 118 453 9.32E-104 T 26-04-2016 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 PANTHER PTHR20852:SF7 1 454 1.8E-139 T 26-04-2016 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 SMART SM01230 117 373 1.6E-98 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 PANTHER PTHR20852 1 454 1.8E-139 T 26-04-2016 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 Pfam PF00120 Glutamine synthetase, catalytic domain 118 451 4.7E-106 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF54368 9 111 5.36E-8 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 Gene3D G3DSA:3.30.590.10 120 440 7.5E-92 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS28845 f42edf6f36caa10457da5957967c1d82 455 Gene3D G3DSA:3.10.20.70 8 109 2.6E-4 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 PANTHER PTHR33370 1 72 9.8E-49 T 26-04-2016 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SUPERFAMILY SSF50249 1 70 1.44E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 26-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 26-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SMART SM00316 4 72 1.7E-6 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.6E-27 T 26-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PAM18_RS12100 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Gene3D G3DSA:2.40.50.140 1 71 1.0E-38 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 26-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 Gene3D G3DSA:3.40.1010.10 4 112 2.9E-13 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 277 2.0E-90 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 PANTHER PTHR21091 4 245 1.3E-82 T 26-04-2016 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 PIRSF PIRSF005917 1 281 6.1E-101 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 Gene3D G3DSA:3.30.950.10 113 227 2.4E-41 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 PANTHER PTHR21091:SF18 4 245 1.3E-82 T 26-04-2016 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 226 36.409 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 205 2.1E-28 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS23060 60303237d8a2e302dc479a39d63b58d9 282 SUPERFAMILY SSF53790 4 224 9.16E-80 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 PANTHER PTHR10426 7 353 3.1E-161 T 26-04-2016 IPR004141 Strictosidine synthase GO:0009058|GO:0016844 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 SUPERFAMILY SSF63829 300 350 5.67E-58 T 26-04-2016 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 SUPERFAMILY SSF63829 41 267 5.67E-58 T 26-04-2016 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 Pfam PF03088 Strictosidine synthase 147 234 2.2E-30 T 26-04-2016 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 PANTHER PTHR10426:SF4 7 353 3.1E-161 T 26-04-2016 PAM18_RS18480 66b2bc9a9f310dcff509e0e62fd449a4 353 Gene3D G3DSA:2.120.10.30 9 349 1.8E-67 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS08740 96293d424e38aa74587b9f908bfcf425 311 PANTHER PTHR10361 1 306 2.3E-97 T 26-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PAM18_RS08740 96293d424e38aa74587b9f908bfcf425 311 Pfam PF01758 Sodium Bile acid symporter family 42 218 1.1E-43 T 26-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 PANTHER PTHR11019 8 254 1.4E-84 T 26-04-2016 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 Pfam PF02311 AraC-like ligand binding domain 18 79 6.2E-7 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 SMART SM00342 164 246 3.7E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 PANTHER PTHR11019:SF53 8 254 1.4E-84 T 26-04-2016 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 7.39E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 7.39E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 Gene3D G3DSA:2.60.120.280 20 135 1.3E-7 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 Gene3D G3DSA:1.10.10.60 145 202 4.6E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 SUPERFAMILY SSF51182 20 212 7.65E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 Gene3D G3DSA:1.10.10.60 203 245 1.7E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 SUPERFAMILY SSF46689 201 247 3.09E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 Pfam PF12833 Helix-turn-helix domain 170 246 1.0E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13145 8cbdf6b22c768f6ff2a1e08921b385d0 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 1 380 1.9E-77 T 26-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 SUPERFAMILY SSF160996 188 328 5.89E-11 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 Gene3D G3DSA:2.40.30.10 192 267 8.6E-4 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 Gene3D G3DSA:3.50.50.60 349 380 2.0E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 Gene3D G3DSA:3.50.50.60 277 278 2.0E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 Gene3D G3DSA:3.50.50.60 1 174 2.0E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 PANTHER PTHR10617:SF103 1 288 4.1E-41 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 PANTHER PTHR10617:SF103 320 388 4.1E-41 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 11 387 1.1E-159 T 26-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 SUPERFAMILY SSF51905 327 386 4.44E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 SUPERFAMILY SSF51905 1 178 4.44E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 PANTHER PTHR10617 1 288 4.1E-41 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 PANTHER PTHR10617 320 388 4.1E-41 T 26-04-2016 PAM18_RS05035 6888fb9074d45a621475b652b8079ab2 391 Pfam PF03486 HI0933-like protein 1 381 6.4E-102 T 26-04-2016 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 Gene3D G3DSA:3.40.50.2300 14 125 4.7E-30 T 26-04-2016 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 PANTHER PTHR26402 13 124 5.1E-68 T 26-04-2016 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 Pfam PF02954 Bacterial regulatory protein, Fis family 148 181 7.8E-12 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 PANTHER PTHR26402:SF344 13 124 5.1E-68 T 26-04-2016 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 Pfam PF00072 Response regulator receiver domain 16 124 4.6E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 SUPERFAMILY SSF52172 12 171 6.69E-33 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 SMART SM00448 13 124 5.3E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 Gene3D G3DSA:1.10.10.60 132 185 6.2E-30 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 148 165 2.6E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS23415 42043027a0f2f273f0f41f0d0b676dd9 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 165 185 2.6E-7 T 26-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 SMART SM00448 3 117 8.0E-16 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.1E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.1E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.1E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 Gene3D G3DSA:1.10.10.10 138 201 4.1E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 PANTHER PTHR26402:SF598 3 199 1.3E-89 T 26-04-2016 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 PANTHER PTHR26402 3 199 1.3E-89 T 26-04-2016 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 SUPERFAMILY SSF46894 136 201 2.11E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 SMART SM00421 143 200 2.8E-20 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 Gene3D G3DSA:3.40.50.2300 2 127 1.1E-24 T 26-04-2016 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 Pfam PF00072 Response regulator receiver domain 5 117 3.9E-18 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 SUPERFAMILY SSF52172 3 127 3.7E-22 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS19095 d5079feed521d31115177919ae056fc5 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 198 2.6E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 Gene3D G3DSA:1.10.10.60 214 261 2.6E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 SMART SM00342 174 256 5.6E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 SUPERFAMILY SSF55785 27 146 1.29E-13 T 26-04-2016 IPR000014 PAS domain PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.6E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.6E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 Gene3D G3DSA:3.30.450.20 27 146 9.8E-17 T 26-04-2016 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 SUPERFAMILY SSF46689 158 207 1.61E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 Gene3D G3DSA:1.10.10.60 155 212 6.5E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 Pfam PF12833 Helix-turn-helix domain 182 257 3.2E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 PANTHER PTHR11019 159 264 1.4E-40 T 26-04-2016 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 PANTHER PTHR11019:SF113 159 264 1.4E-40 T 26-04-2016 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 SUPERFAMILY SSF46689 214 260 1.25E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19280 a359446f59cfda869f847e5fe6d7b719 265 Pfam PF08448 PAS fold 40 147 1.4E-19 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 Gene3D G3DSA:1.20.1250.20 5 190 3.1E-30 T 26-04-2016 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 Gene3D G3DSA:1.20.1250.20 191 374 2.5E-13 T 26-04-2016 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 PANTHER PTHR23501 1 388 1.7E-172 T 26-04-2016 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 PANTHER PTHR23501:SF4 1 388 1.7E-172 T 26-04-2016 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 Pfam PF07690 Major Facilitator Superfamily 8 341 1.3E-38 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS22715 61d6914994b396cb27a76bd11b291a93 388 SUPERFAMILY SSF103473 5 375 6.15E-56 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 PANTHER PTHR13832 4 240 7.0E-38 T 26-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 Pfam PF13672 Protein phosphatase 2C 21 207 1.4E-11 T 26-04-2016 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 PANTHER PTHR13832:SF278 4 240 7.0E-38 T 26-04-2016 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 SUPERFAMILY SSF81606 9 240 2.75E-58 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 SMART SM00332 6 239 4.6E-25 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 SMART SM00331 15 241 1.1E-27 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS00385 46f2252454abba2f4ff91aa5b8f64d64 242 Gene3D G3DSA:3.60.40.10 9 240 8.0E-58 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 PANTHER PTHR30465:SF10 11 301 5.0E-129 T 26-04-2016 PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 8.3E-31 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 70 1.7E-13 T 26-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 Gene3D G3DSA:1.10.3720.10 93 297 2.7E-28 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 SUPERFAMILY SSF161098 94 281 5.63E-29 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS23470 9c571862d631afc7e61bff30207f6269 303 PANTHER PTHR30465 11 301 5.0E-129 T 26-04-2016 PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 PANTHER PTHR24220 6 265 3.6E-158 T 26-04-2016 PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 SUPERFAMILY SSF52540 5 230 5.0E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 Gene3D G3DSA:3.40.50.300 4 238 1.1E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 PANTHER PTHR24220:SF438 6 265 3.6E-158 T 26-04-2016 PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 Pfam PF00005 ABC transporter 21 168 2.1E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03980 4c9c487b8c1cce2411c2347a0d09ff8a 265 SMART SM00382 29 238 5.7E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 PANTHER PTHR33445 1 156 4.8E-48 T 26-04-2016 PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.0E-37 T 26-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.913 T 26-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 Gene3D G3DSA:1.20.5.620 63 122 1.5E-22 T 26-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 SUPERFAMILY SSF81573 63 121 1.15E-14 T 26-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain PAM18_RS29060 9dadd1e6e5ceeff5a57ce01c758673be 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 4.9E-48 T 26-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 PAM18_RS23950 7aa0dbba85fde10263cbba04a8a0f324 397 Pfam PF02687 FtsX-like permease family 278 390 8.7E-19 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS23950 7aa0dbba85fde10263cbba04a8a0f324 397 Pfam PF12704 MacB-like periplasmic core domain 25 239 1.4E-21 T 26-04-2016 IPR025857 MacB-like periplasmic core domain PAM18_RS23950 7aa0dbba85fde10263cbba04a8a0f324 397 PANTHER PTHR30572 8 397 3.9E-72 T 26-04-2016 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.0E-84 T 26-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 PANTHER PTHR21327 1 365 6.3E-151 T 26-04-2016 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 SUPERFAMILY SSF142695 204 363 5.1E-40 T 26-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 SUPERFAMILY SSF55821 2 202 5.72E-87 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 PANTHER PTHR21327:SF6 1 365 6.3E-151 T 26-04-2016 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.815 T 26-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 PIRSF PIRSF001259 1 365 1.5E-116 T 26-04-2016 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 Gene3D G3DSA:3.90.870.10 1 211 2.4E-100 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 4.5E-75 T 26-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04510 a61b96969e0063705c657fb40f85d175 365 Pfam PF00925 GTP cyclohydrolase II 207 363 5.1E-30 T 26-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 PANTHER PTHR33867 1 152 5.1E-57 T 26-04-2016 PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 PANTHER PTHR33867:SF1 1 152 5.1E-57 T 26-04-2016 PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 Gene3D G3DSA:3.30.300.70 3 80 3.1E-34 T 26-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF75420 3 83 4.18E-27 T 26-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 Gene3D G3DSA:2.30.30.180 88 147 1.3E-12 T 26-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.859 T 26-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 Pfam PF02576 Putative ribosome maturation factor RimP 11 147 3.3E-51 T 26-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 PAM18_RS24850 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF74942 84 151 1.02E-17 T 26-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 SMART SM00283 85 343 6.7E-46 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 SUPERFAMILY SSF58104 77 347 2.62E-56 T 26-04-2016 PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 132 342 5.1E-43 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 PANTHER PTHR32089:SF34 64 349 1.1E-83 T 26-04-2016 PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 PANTHER PTHR32089 64 349 1.1E-83 T 26-04-2016 PAM18_RS22385 5845df0dbfc8ba3142a2e9d37790e97c 538 Gene3D G3DSA:1.10.287.950 100 311 1.3E-47 T 26-04-2016 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 291 8.2E-75 T 26-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 PANTHER PTHR32039:SF8 55 360 6.5E-109 T 26-04-2016 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 PANTHER PTHR32039 55 360 6.5E-109 T 26-04-2016 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 Pfam PF02481 DNA recombination-mediator protein A 82 283 4.2E-75 T 26-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 SUPERFAMILY SSF102405 85 293 3.97E-45 T 26-04-2016 PAM18_RS00105 33b0d3ab1be95d5e1c43064601b7ab71 362 Gene3D G3DSA:3.40.50.450 116 295 7.9E-13 T 26-04-2016 PAM18_RS25080 48c7ca033e33c1815688dc0c2430068d 101 SUPERFAMILY SSF101386 1 99 2.94E-30 T 26-04-2016 PAM18_RS25080 48c7ca033e33c1815688dc0c2430068d 101 Gene3D G3DSA:1.10.287.1080 1 92 3.9E-20 T 26-04-2016 PAM18_RS25080 48c7ca033e33c1815688dc0c2430068d 101 Pfam PF12643 MazG-like family 31 94 1.8E-7 T 26-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 PAM18_RS25080 48c7ca033e33c1815688dc0c2430068d 101 PANTHER PTHR14552 1 99 2.9E-27 T 26-04-2016 PAM18_RS25080 48c7ca033e33c1815688dc0c2430068d 101 PIRSF PIRSF029826 1 101 1.2E-35 T 26-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 1.1E-27 T 26-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.3E-115 T 26-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 PANTHER PTHR13696:SF1 4 257 4.5E-94 T 26-04-2016 PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 PANTHER PTHR13696 4 257 4.5E-94 T 26-04-2016 PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 PIRSF PIRSF003092 1 271 1.6E-91 T 26-04-2016 IPR025501 ATP binding protein MinD PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 Gene3D G3DSA:3.40.50.300 2 247 1.0E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08860 76f5f09aed02de3068fb05a54fd47f1c 271 SUPERFAMILY SSF52540 2 268 6.11E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 PANTHER PTHR30024:SF17 1 328 7.3E-93 T 26-04-2016 PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 Pfam PF09084 NMT1/THI5 like 62 243 2.2E-21 T 26-04-2016 IPR015168 SsuA/THI5-like PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 SUPERFAMILY SSF53850 28 247 3.48E-46 T 26-04-2016 PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 PANTHER PTHR30024 1 328 7.3E-93 T 26-04-2016 PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 SMART SM00062 27 250 2.3E-4 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 28 326 6.5E-132 T 26-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 PAM18_RS05090 71477388a048aa8ef1d77e20865aa4a6 337 Gene3D G3DSA:3.40.190.10 110 230 2.7E-22 T 26-04-2016 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 333 33.465 T 26-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 PANTHER PTHR30004:SF3 3 336 2.0E-245 T 26-04-2016 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 PANTHER PTHR30004 3 336 2.0E-245 T 26-04-2016 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 SUPERFAMILY SSF53659 7 334 7.73E-91 T 26-04-2016 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 Gene3D G3DSA:3.40.718.10 4 335 3.9E-99 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 PAM18_RS14500 e8621cb757b7c27cdd9a5c9ff5ddef56 337 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 38 329 2.5E-82 T 26-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 Pfam PF10615 Protein of unknown function (DUF2470) 159 230 7.5E-14 T 26-04-2016 IPR019595 Domain of unknown function DUF2470 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 4 146 2.9E-14 T 26-04-2016 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 Gene3D G3DSA:3.20.180.10 153 242 2.8E-33 T 26-04-2016 IPR019595 Domain of unknown function DUF2470 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 PANTHER PTHR13343:SF4 4 244 1.4E-59 T 26-04-2016 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 PANTHER PTHR13343 4 244 1.4E-59 T 26-04-2016 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 SUPERFAMILY SSF50475 3 236 8.23E-57 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS22890 2ebda5760d51f379d75082ec055790e0 244 Gene3D G3DSA:2.30.110.10 4 148 3.2E-55 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 Gene3D G3DSA:3.40.50.1100 131 202 4.3E-7 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 397 2.0E-25 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 Gene3D G3DSA:3.40.50.1100 203 437 2.0E-95 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314:SF1 53 329 2.0E-169 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314:SF1 361 468 2.0E-169 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314:SF1 25 36 2.0E-169 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 Pfam PF14821 Threonine synthase N terminus 2 80 3.3E-28 T 26-04-2016 IPR029144 Threonine synthase, N-terminal PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 423 1.6E-80 T 26-04-2016 IPR004450 Threonine synthase-like PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 SUPERFAMILY SSF53686 1 461 5.76E-165 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 Gene3D G3DSA:3.90.1380.10 1 85 1.2E-29 T 26-04-2016 IPR029144 Threonine synthase, N-terminal PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314 53 329 2.0E-169 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314 361 468 2.0E-169 T 26-04-2016 PAM18_RS06130 fe9ce19a7358da3d640ff930e89b1f79 469 PANTHER PTHR10314 25 36 2.0E-169 T 26-04-2016 PAM18_RS17030 97d1994286a0f461ac614dc201337afe 214 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.5E-40 T 26-04-2016 IPR012842 Type III secretion system HrpE/YscL PAM18_RS17030 97d1994286a0f461ac614dc201337afe 214 Pfam PF02108 Flagellar assembly protein FliH 74 194 1.9E-17 T 26-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PAM18_RS17030 97d1994286a0f461ac614dc201337afe 214 PANTHER PTHR34982 1 213 3.1E-90 T 26-04-2016 PAM18_RS17030 97d1994286a0f461ac614dc201337afe 214 PANTHER PTHR34982:SF2 1 213 3.1E-90 T 26-04-2016 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 Pfam PF00156 Phosphoribosyl transferase domain 48 157 1.3E-12 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 175 1.1E-58 T 26-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 PANTHER PTHR11776:SF0 8 173 1.8E-67 T 26-04-2016 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 PANTHER PTHR11776 8 173 1.8E-67 T 26-04-2016 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 35.233 T 26-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 Gene3D G3DSA:3.40.50.2020 7 176 8.8E-60 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS17960 183bfb13e0687f924952352a4dc5e115 182 SUPERFAMILY SSF53271 5 177 6.03E-49 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Gene3D G3DSA:3.90.700.10 244 348 3.1E-40 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 PANTHER PTHR11632:SF27 3 533 1.1E-268 T 26-04-2016 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.9E-13 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 520 2.6E-201 T 26-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Pfam PF00890 FAD binding domain 8 392 3.7E-107 T 26-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 SUPERFAMILY SSF51905 356 448 1.3E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 SUPERFAMILY SSF51905 3 255 1.3E-72 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 PANTHER PTHR11632 3 533 1.1E-268 T 26-04-2016 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Gene3D G3DSA:1.20.58.100 420 521 1.1E-31 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Gene3D G3DSA:3.50.50.60 3 243 7.7E-100 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 Gene3D G3DSA:3.50.50.60 349 411 7.7E-100 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.3E-9 T 26-04-2016 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.3E-9 T 26-04-2016 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 SUPERFAMILY SSF46977 425 529 1.57E-31 T 26-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 PAM18_RS21835 2c92fd1bbade562d3c9f969a0f55f195 538 SUPERFAMILY SSF56425 238 353 8.07E-44 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 4.8E-19 T 26-04-2016 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF46785 2 89 3.27E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:3.30.70.920 56 140 4.0E-30 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.9E-17 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.9E-17 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.9E-17 T 26-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF54909 63 152 1.47E-21 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 SMART SM00344 3 112 5.6E-45 T 26-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:1.10.10.10 1 54 4.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 PANTHER PTHR30154 1 156 8.4E-74 T 26-04-2016 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 PANTHER PTHR30154:SF28 1 156 8.4E-74 T 26-04-2016 PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 9.0E-23 T 26-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PAM18_RS23490 724644666e54309d42a01c8caf268db2 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 26-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 394 3.4E-103 T 26-04-2016 IPR014047 Chromate transporter, long chain PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 Pfam PF02417 Chromate transporter 13 177 2.2E-34 T 26-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 Pfam PF02417 Chromate transporter 228 394 1.4E-41 T 26-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 PIRSF PIRSF004810 2 400 6.3E-130 T 26-04-2016 IPR014047 Chromate transporter, long chain PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 PANTHER PTHR33567 3 394 3.9E-157 T 26-04-2016 PAM18_RS22380 bf9f3bf59722999b60254b5e0bb8f5d8 401 PANTHER PTHR33567:SF3 3 394 3.9E-157 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 1.3E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 1.3E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 1.3E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.3E-17 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SUPERFAMILY SSF52172 662 781 3.98E-42 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SMART SM00448 663 776 4.1E-41 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 370 1.0E-17 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PANTHER PTHR24423 14 25 8.6E-166 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PANTHER PTHR24423 231 781 8.6E-166 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SUPERFAMILY SSF55874 359 528 2.36E-48 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SMART SM00387 416 527 8.2E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SUPERFAMILY SSF52172 542 645 1.46E-6 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Gene3D G3DSA:3.30.565.10 371 529 2.0E-47 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PANTHER PTHR24423:SF421 14 25 8.6E-166 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 PANTHER PTHR24423:SF421 231 781 8.6E-166 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Pfam PF00072 Response regulator receiver domain 665 776 1.7E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Gene3D G3DSA:3.40.50.2300 655 780 6.8E-47 T 26-04-2016 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Gene3D G3DSA:1.10.287.130 301 366 1.1E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 526 4.9E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SMART SM00388 305 370 2.2E-22 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS10970 d907e17e237b8f6d8397ed8e4c66118c 786 SUPERFAMILY SSF47384 290 371 1.04E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS14555 457b3d4eecb5438c74c14104cb4bb802 294 Gene3D G3DSA:1.20.1440.70 1 130 9.3E-74 T 26-04-2016 IPR028997 PA2201-like, N-terminal PAM18_RS14555 457b3d4eecb5438c74c14104cb4bb802 294 Pfam PF08929 Domain of unknown function (DUF1911) 177 284 4.0E-22 T 26-04-2016 IPR015025 Domain of unknown function DUF1911 PAM18_RS14555 457b3d4eecb5438c74c14104cb4bb802 294 SUPERFAMILY SSF140731 137 291 4.71E-44 T 26-04-2016 IPR028983 PA2201-like, C-terminal PAM18_RS14555 457b3d4eecb5438c74c14104cb4bb802 294 Gene3D G3DSA:1.10.3920.10 137 291 1.0E-40 T 26-04-2016 IPR028983 PA2201-like, C-terminal PAM18_RS14555 457b3d4eecb5438c74c14104cb4bb802 294 SUPERFAMILY SSF140486 6 129 4.71E-61 T 26-04-2016 IPR028997 PA2201-like, N-terminal PAM18_RS14215 ab201b40ee699b1693e8bc5acecab8a8 125 Pfam PF03992 Antibiotic biosynthesis monooxygenase 48 95 1.1E-5 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS14215 ab201b40ee699b1693e8bc5acecab8a8 125 SUPERFAMILY SSF54909 15 120 4.49E-14 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS14215 ab201b40ee699b1693e8bc5acecab8a8 125 Gene3D G3DSA:3.30.70.900 15 120 2.0E-24 T 26-04-2016 PAM18_RS26905 5133146cc597ca07aa270783c103aee2 750 PANTHER PTHR30441 159 749 4.4E-300 T 26-04-2016 PAM18_RS26905 5133146cc597ca07aa270783c103aee2 750 PANTHER PTHR30441 1 137 4.4E-300 T 26-04-2016 PAM18_RS26905 5133146cc597ca07aa270783c103aee2 750 Pfam PF05170 AsmA family 1 635 2.7E-192 T 26-04-2016 IPR007844 AsmA PAM18_RS26905 5133146cc597ca07aa270783c103aee2 750 PANTHER PTHR30441:SF4 159 749 4.4E-300 T 26-04-2016 PAM18_RS26905 5133146cc597ca07aa270783c103aee2 750 PANTHER PTHR30441:SF4 1 137 4.4E-300 T 26-04-2016 PAM18_RS11185 38d0016b8115fbb7f62e0871906481ab 72 SUPERFAMILY SSF47413 2 69 5.09E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS11185 38d0016b8115fbb7f62e0871906481ab 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 4.1E-21 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS11185 38d0016b8115fbb7f62e0871906481ab 72 Gene3D G3DSA:1.10.260.40 1 69 9.4E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS11185 38d0016b8115fbb7f62e0871906481ab 72 SMART SM00530 9 62 0.0057 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS11185 38d0016b8115fbb7f62e0871906481ab 72 PANTHER PTHR37301 2 72 4.2E-34 T 26-04-2016 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 Gene3D G3DSA:2.40.50.140 138 200 1.8E-27 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 160 169 1.9E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 140 155 1.9E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 175 193 1.9E-15 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 SUPERFAMILY SSF50249 137 200 3.67E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 PANTHER PTHR11544 136 201 2.2E-33 T 26-04-2016 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 SMART SM00357 139 202 6.5E-25 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 ProSitePatterns PS00352 'Cold-shock' domain signature. 151 169 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS20810 070ac70e6b60b40d5306f3185c1f66fd 204 Pfam PF00313 'Cold-shock' DNA-binding domain 139 200 1.6E-25 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS15365 99549a156a82df9a2199102c3b0776a2 98 Gene3D G3DSA:3.30.70.900 10 93 3.1E-15 T 26-04-2016 PAM18_RS15365 99549a156a82df9a2199102c3b0776a2 98 SUPERFAMILY SSF54909 10 89 1.86E-13 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS15365 99549a156a82df9a2199102c3b0776a2 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 80 5.5E-13 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Gene3D G3DSA:3.40.50.20 20 100 3.0E-28 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 313 3.8E-110 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Pfam PF01820 D-ala D-ala ligase N-terminus 20 102 2.3E-21 T 26-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 PANTHER PTHR23132 20 317 2.1E-97 T 26-04-2016 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 SUPERFAMILY SSF56059 113 312 6.36E-59 T 26-04-2016 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Gene3D G3DSA:3.30.1490.20 123 189 1.1E-25 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 315 35.06 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Pfam PF07478 D-ala D-ala ligase C-terminus 120 311 2.4E-56 T 26-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 SUPERFAMILY SSF52440 20 112 5.08E-30 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Gene3D G3DSA:3.30.470.20 101 119 4.8E-47 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS23000 d32bfe41e42ac76ac1e2742a90f45214 319 Gene3D G3DSA:3.30.470.20 190 312 4.8E-47 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 PANTHER PTHR10146 1 225 4.4E-107 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 Pfam PF01168 Alanine racemase, N-terminal domain 9 223 3.1E-34 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 SUPERFAMILY SSF51419 1 221 1.57E-81 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 Gene3D G3DSA:3.20.20.10 1 226 3.6E-94 T 26-04-2016 IPR029066 PLP-binding barrel PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 223 2.1E-74 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 PAM18_RS01995 2239967f08b2775c8a97ca07e3cfe807 230 PIRSF PIRSF004848 1 228 4.5E-70 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 75 285 1.6E-48 T 26-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 Gene3D G3DSA:3.90.226.10 50 176 6.1E-51 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 Gene3D G3DSA:3.90.226.10 214 300 6.1E-51 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 Pfam PF01343 Peptidase family S49 141 289 2.1E-35 T 26-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 PANTHER PTHR30341 2 323 7.0E-173 T 26-04-2016 PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 SUPERFAMILY SSF52096 54 184 4.52E-44 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 SUPERFAMILY SSF52096 213 275 4.52E-44 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10210 068160e9a4c382249fddb310843a04db 326 PANTHER PTHR30341:SF1 2 323 7.0E-173 T 26-04-2016 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 307 42.731 T 26-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 PANTHER PTHR37689 1 309 1.1E-107 T 26-04-2016 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 PANTHER PTHR37689:SF1 1 309 1.1E-107 T 26-04-2016 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 SUPERFAMILY SSF144020 20 307 4.18E-88 T 26-04-2016 IPR024064 FdhE-like PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 Gene3D G3DSA:3.90.1670.10 21 307 3.0E-90 T 26-04-2016 IPR024064 FdhE-like PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 PIRSF PIRSF018296 1 309 2.1E-113 T 26-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 306 8.1E-155 T 26-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PAM18_RS25180 7c300fa9f1fdddffde543cfcef78d3f6 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 16 304 5.0E-98 T 26-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 PAM18_RS27855 61ecc2e2d71d6dc55c508a0e12af242d 259 SUPERFAMILY SSF56219 1 254 2.49E-53 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS27855 61ecc2e2d71d6dc55c508a0e12af242d 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 3.0E-58 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS27855 61ecc2e2d71d6dc55c508a0e12af242d 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 243 6.0E-10 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS27855 61ecc2e2d71d6dc55c508a0e12af242d 259 Gene3D G3DSA:3.60.10.10 1 254 4.1E-65 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS27855 61ecc2e2d71d6dc55c508a0e12af242d 259 PANTHER PTHR22748 1 255 6.6E-69 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.10.60 2 48 2.0E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.357.10 49 179 3.6E-39 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 PANTHER PTHR30328:SF22 7 180 1.3E-133 T 26-04-2016 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF48498 78 179 1.25E-25 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.9E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.9E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.9E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 PANTHER PTHR30328 7 180 1.3E-133 T 26-04-2016 PAM18_RS09400 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF46689 1 70 3.54E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 368 377 - T 26-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 Gene3D G3DSA:1.10.630.10 26 424 2.8E-64 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00463 E-class P450 group I signature 291 309 3.9E-17 T 26-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00463 E-class P450 group I signature 375 398 3.9E-17 T 26-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00463 E-class P450 group I signature 365 375 3.9E-17 T 26-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00463 E-class P450 group I signature 249 275 3.9E-17 T 26-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00463 E-class P450 group I signature 332 356 3.9E-17 T 26-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00385 P450 superfamily signature 375 386 9.4E-11 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00385 P450 superfamily signature 240 257 9.4E-11 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00385 P450 superfamily signature 366 375 9.4E-11 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PRINTS PR00385 P450 superfamily signature 292 303 9.4E-11 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PANTHER PTHR24305 16 425 4.0E-78 T 26-04-2016 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 SUPERFAMILY SSF48264 23 424 1.57E-66 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 Pfam PF00067 Cytochrome P450 228 398 3.5E-40 T 26-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 PAM18_RS06415 0cc7197e87e417efd72bc2c061391eca 425 PANTHER PTHR24305:SF65 16 425 4.0E-78 T 26-04-2016 PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 Pfam PF00753 Metallo-beta-lactamase superfamily 47 229 3.6E-12 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 PANTHER PTHR11935 1 295 1.9E-110 T 26-04-2016 PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 Gene3D G3DSA:3.60.15.10 33 255 2.9E-41 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 PANTHER PTHR11935:SF5 1 295 1.9E-110 T 26-04-2016 PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 SUPERFAMILY SSF56281 26 253 3.08E-44 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS00295 df383cb279eb592222a63429accacd3c 295 SMART SM00849 44 229 3.4E-22 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 SUPERFAMILY SSF53335 210 385 2.89E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 PANTHER PTHR14741:SF34 186 360 4.0E-52 T 26-04-2016 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 PANTHER PTHR14741 186 360 4.0E-52 T 26-04-2016 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 SUPERFAMILY SSF53790 10 210 2.88E-36 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 Gene3D G3DSA:3.40.1010.10 9 112 2.8E-20 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 198 6.5E-42 T 26-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 236 357 2.9E-35 T 26-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 Gene3D G3DSA:3.40.50.150 236 407 2.1E-21 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 PIRSF PIRSF036428 7 407 7.0E-140 T 26-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 188 4.5E-17 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS10545 eb0e2fc562641ab7f815470d57ea817e 415 Gene3D G3DSA:3.30.950.10 113 213 3.0E-30 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS11215 4ab1c49aad8e69cdb7c669d232d2a4f4 132 PIRSF PIRSF029543 1 131 3.3E-58 T 26-04-2016 IPR016924 Uncharacterised conserved protein UCP029543 PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.5E-34 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 SUPERFAMILY SSF51735 9 248 3.4E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PANTHER PTHR24314 5 253 2.4E-73 T 26-04-2016 PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 4.7E-68 T 26-04-2016 PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.0E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS09535 b35bb61307e6eb8212283f7ed2cb6e98 255 Gene3D G3DSA:3.40.50.720 9 249 1.4E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 Gene3D G3DSA:1.10.287.950 464 682 1.0E-59 T 26-04-2016 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 523 710 5.3E-51 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 Pfam PF02743 Cache domain 49 287 1.1E-15 T 26-04-2016 IPR033479 Double Cache domain 1 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 Pfam PF00672 HAMP domain 362 431 1.1E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 PANTHER PTHR32089:SF34 121 712 2.1E-274 T 26-04-2016 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 SUPERFAMILY SSF58104 403 712 3.01E-82 T 26-04-2016 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 PANTHER PTHR32089 121 712 2.1E-274 T 26-04-2016 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 SMART SM00304 381 435 1.2E-10 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 Gene3D G3DSA:3.30.450.20 205 346 6.5E-7 T 26-04-2016 PAM18_RS24160 1b88c98e1f7c511d98cfe6d421635d15 712 SMART SM00283 450 711 1.3E-81 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 3.2E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 3.2E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 200 8.5E-14 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 PANTHER PTHR12725 1 231 4.0E-69 T 26-04-2016 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 PANTHER PTHR12725:SF65 1 231 4.0E-69 T 26-04-2016 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 SUPERFAMILY SSF56784 5 229 7.37E-47 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 195 7.9E-13 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 Gene3D G3DSA:3.40.50.1000 4 225 1.1E-41 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27600 b9cd7f95645a18cff7501f91ba5fbf18 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 200 3.5E-20 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS22125 1394868affbeb63b26252cf4f5cc9c9d 206 Gene3D G3DSA:2.160.10.10 49 203 2.1E-47 T 26-04-2016 PAM18_RS22125 1394868affbeb63b26252cf4f5cc9c9d 206 SUPERFAMILY SSF51161 55 202 5.54E-41 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS22125 1394868affbeb63b26252cf4f5cc9c9d 206 PANTHER PTHR23416:SF59 57 177 6.2E-48 T 26-04-2016 PAM18_RS22125 1394868affbeb63b26252cf4f5cc9c9d 206 PANTHER PTHR23416 57 177 6.2E-48 T 26-04-2016 PAM18_RS22125 1394868affbeb63b26252cf4f5cc9c9d 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 1.2E-8 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.660 124 260 3.8E-47 T 26-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 160 262 1.7E-31 T 26-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 25 120 4.5E-6 T 26-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 PIRSF PIRSF001430 17 277 6.8E-74 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 18 261 34.62 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.580 18 122 1.1E-35 T 26-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 19 256 1.5E-66 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 SUPERFAMILY SSF55120 18 275 4.32E-91 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS09495 c53d4ab4d842854d173d0c59077967fd 285 PANTHER PTHR11142 19 277 6.1E-97 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS02820 3b55233038cb452411aba7b0276a03ca 141 Pfam PF13474 SnoaL-like domain 8 129 2.5E-19 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS02820 3b55233038cb452411aba7b0276a03ca 141 SUPERFAMILY SSF54427 1 128 5.02E-31 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS02820 3b55233038cb452411aba7b0276a03ca 141 Gene3D G3DSA:3.10.450.50 3 126 1.0E-31 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS02820 3b55233038cb452411aba7b0276a03ca 141 PANTHER PTHR35174:SF3 1 121 2.1E-80 T 26-04-2016 PAM18_RS02820 3b55233038cb452411aba7b0276a03ca 141 PANTHER PTHR35174 1 121 2.1E-80 T 26-04-2016 PAM18_RS15130 b906daa0bbbf00be628b6d8efa8929f3 318 PIRSF PIRSF018266 1 318 1.2E-63 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS15130 b906daa0bbbf00be628b6d8efa8929f3 318 Pfam PF04773 FecR protein 115 205 2.1E-11 T 26-04-2016 IPR006860 FecR protein PAM18_RS15130 b906daa0bbbf00be628b6d8efa8929f3 318 PANTHER PTHR30273:SF4 4 318 9.4E-205 T 26-04-2016 PAM18_RS15130 b906daa0bbbf00be628b6d8efa8929f3 318 Pfam PF16220 Domain of unknown function (DUF4880) 12 51 2.4E-12 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS15130 b906daa0bbbf00be628b6d8efa8929f3 318 PANTHER PTHR30273 4 318 9.4E-205 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS17775 1e05b0a0a7df5f245ed74d485a36a262 84 PANTHER PTHR36931 1 83 1.7E-40 T 26-04-2016 PAM18_RS17775 1e05b0a0a7df5f245ed74d485a36a262 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 5.8E-6 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PAM18_RS00500 20449f0d2c15ba1efba751c6613c120b 345 SUPERFAMILY SSF53901 133 314 1.3E-10 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS00500 20449f0d2c15ba1efba751c6613c120b 345 Gene3D G3DSA:3.40.47.10 38 197 6.8E-7 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 Gene3D G3DSA:3.20.20.70 50 525 6.6E-125 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 PANTHER PTHR11938 160 516 1.3E-98 T 26-04-2016 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 SUPERFAMILY SSF51395 6 502 8.37E-139 T 26-04-2016 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 PANTHER PTHR11938:SF50 160 516 1.3E-98 T 26-04-2016 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 Pfam PF01645 Conserved region in glutamate synthase 158 475 1.6E-81 T 26-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF500060 12 532 1.9E-239 T 26-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria PAM18_RS07120 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF006429 8 535 2.8E-164 T 26-04-2016 IPR024188 Glutamate synthase large subunit-like protein PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 PANTHER PTHR37296 1 279 6.9E-120 T 26-04-2016 PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 PIRSF PIRSF012524 1 279 5.4E-104 T 26-04-2016 IPR014464 Conserved virulence factor B PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 146 208 0.87 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 71 133 6.9 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 4 66 3.9E-25 T 26-04-2016 PAM18_RS20000 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 72 131 2.3E-9 T 26-04-2016 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 Gene3D G3DSA:3.40.605.10 32 299 4.7E-53 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 PANTHER PTHR11699 9 541 0.0 T 26-04-2016 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 SUPERFAMILY SSF53720 22 511 3.01E-106 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 Pfam PF00171 Aldehyde dehydrogenase family 64 505 5.4E-95 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 PANTHER PTHR11699:SF69 9 541 0.0 T 26-04-2016 PAM18_RS13975 4070fb3bb54117fe4486d7c7d8f9a36f 541 Gene3D G3DSA:3.40.309.10 300 485 6.9E-49 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS18505 21ef05ece3bc85e4e3ac9dd4ff10e6a6 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 171 6.8E-69 T 26-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PAM18_RS18505 21ef05ece3bc85e4e3ac9dd4ff10e6a6 171 Gene3D G3DSA:1.10.3330.10 11 171 2.1E-60 T 26-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PAM18_RS18505 21ef05ece3bc85e4e3ac9dd4ff10e6a6 171 Pfam PF09349 OHCU decarboxylase 11 169 1.3E-45 T 26-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 PAM18_RS18505 21ef05ece3bc85e4e3ac9dd4ff10e6a6 171 SUPERFAMILY SSF158694 11 171 1.28E-52 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 Pfam PF03702 Uncharacterised protein family (UPF0075) 3 363 1.8E-169 T 26-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 Gene3D G3DSA:3.30.420.40 140 322 7.3E-73 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 PANTHER PTHR30605:SF0 2 362 6.3E-172 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 SUPERFAMILY SSF53067 63 108 4.14E-25 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 SUPERFAMILY SSF53067 138 307 4.14E-25 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 SUPERFAMILY SSF53067 3 36 4.14E-25 T 26-04-2016 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 363 40.955 T 26-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 PAM18_RS03280 8e3789bc45d25da58f92090c40d44702 363 PANTHER PTHR30605 2 362 6.3E-172 T 26-04-2016 PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 SMART SM00470 52 150 2.9E-6 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 PANTHER PTHR30083 1 211 1.8E-123 T 26-04-2016 PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 Pfam PF02195 ParB-like nuclease domain 53 149 5.5E-13 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 PANTHER PTHR30083:SF1 1 211 1.8E-123 T 26-04-2016 PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 SUPERFAMILY SSF110849 50 183 1.92E-18 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS14965 bc4432473e49c6f9cd349f1529a8dd50 211 Gene3D G3DSA:3.90.1530.10 46 112 2.4E-12 T 26-04-2016 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 SUPERFAMILY SSF102705 5 251 3.01E-79 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 12 240 1.1E-57 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 251 1.0E-61 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 PANTHER PTHR13799 3 247 2.4E-82 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 Gene3D G3DSA:3.40.1390.30 5 109 1.2E-36 T 26-04-2016 PAM18_RS23175 d6ea4325e9c8a420afed33d8203f3704 252 Gene3D G3DSA:3.40.1390.30 110 219 1.4E-32 T 26-04-2016 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 PANTHER PTHR20852:SF63 9 447 7.1E-248 T 26-04-2016 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 Gene3D G3DSA:3.30.590.10 112 431 1.3E-88 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 SUPERFAMILY SSF55931 110 442 6.08E-100 T 26-04-2016 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 SMART SM01230 109 365 1.1E-101 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 PANTHER PTHR20852 9 447 7.1E-248 T 26-04-2016 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 SUPERFAMILY SSF54368 15 107 8.5E-9 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS08270 eebd32ac8c8794a2c09b91bfe992edc3 447 Pfam PF00120 Glutamine synthetase, catalytic domain 111 441 1.2E-103 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS23295 818fc5c5e602fe7141efa0eb8c3e5417 149 Gene3D G3DSA:1.25.40.10 8 79 6.3E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 Gene3D G3DSA:3.20.70.20 132 659 2.7E-193 T 26-04-2016 PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 Pfam PF03477 ATP cone domain 14 96 4.2E-20 T 26-04-2016 IPR005144 ATP-cone domain PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 126 659 1.4E-133 T 26-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 SUPERFAMILY SSF51998 127 660 3.66E-153 T 26-04-2016 PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 PANTHER PTHR21075 3 659 1.9E-249 T 26-04-2016 PAM18_RS15990 64ddc81459df03bf516301b46a74703c 675 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 127 658 2.9E-168 T 26-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PANTHER PTHR30050 177 514 5.0E-235 T 26-04-2016 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PANTHER PTHR30050 1 102 5.0E-235 T 26-04-2016 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 SMART SM00760 422 491 9.1E-44 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 513 34.157 T 26-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 423 491 9.3E-32 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 SUPERFAMILY SSF48295 410 512 6.28E-37 T 26-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:3.40.50.300 173 343 1.3E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 ProSitePatterns PS01008 DnaA protein signature. 472 491 - T 26-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF11638 DnaA N-terminal domain 4 63 1.6E-20 T 26-04-2016 IPR024633 DnaA N-terminal domain PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 276 290 1.77E-52 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 258 1.77E-52 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 472 491 1.77E-52 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 310 337 1.77E-52 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 232 1.77E-52 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 SUPERFAMILY SSF52540 180 390 2.21E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF00308 Bacterial dnaA protein 179 396 9.3E-100 T 26-04-2016 IPR013317 Chromosomal replication initiator protein DnaA PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PANTHER PTHR30050:SF2 177 514 5.0E-235 T 26-04-2016 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 PANTHER PTHR30050:SF2 1 102 5.0E-235 T 26-04-2016 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 SMART SM00382 211 420 2.3E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 512 1.8E-187 T 26-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:1.10.1750.10 413 513 5.0E-41 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PAM18_RS00005 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:1.10.8.60 345 412 3.5E-30 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF53850 90 295 7.6E-50 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 PANTHER PTHR30118 1 305 1.5E-151 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF46785 2 82 4.03E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:1.10.10.10 1 85 2.3E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 173 257 2.6E-26 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 271 300 5.5E-34 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 90 172 5.5E-34 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 PANTHER PTHR30118:SF4 1 305 1.5E-151 T 26-04-2016 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF03466 LysR substrate binding domain 93 296 2.5E-32 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS12820 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.2E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS23205 c0b82c26858270dedeab9e498ba386cd 79 Pfam PF01722 BolA-like protein 22 70 6.3E-8 T 26-04-2016 IPR002634 BolA protein PAM18_RS23205 c0b82c26858270dedeab9e498ba386cd 79 Gene3D G3DSA:3.30.300.90 1 78 1.0E-20 T 26-04-2016 IPR002634 BolA protein PAM18_RS23205 c0b82c26858270dedeab9e498ba386cd 79 PIRSF PIRSF003113 1 79 8.3E-16 T 26-04-2016 IPR002634 BolA protein PAM18_RS23205 c0b82c26858270dedeab9e498ba386cd 79 SUPERFAMILY SSF82657 1 78 1.22E-21 T 26-04-2016 IPR002634 BolA protein PAM18_RS11850 c4db9f81fcfd1f05274f0299be2f8677 117 Pfam PF00816 H-NS histone family 13 105 3.7E-6 T 26-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PANTHER PTHR22912 6 464 4.8E-35 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 Gene3D G3DSA:3.50.50.60 6 116 1.3E-16 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 424 8.1E-12 T 26-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 SUPERFAMILY SSF51905 6 330 1.8E-29 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 Gene3D G3DSA:3.50.50.60 117 330 2.5E-17 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PIRSF PIRSF037495 1 464 1.0E-136 T 26-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-10 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 1.8E-10 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.8E-10 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.8E-10 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 PANTHER PTHR22912:SF141 6 464 4.8E-35 T 26-04-2016 PAM18_RS14590 656f8ef2b85d06fb8876848adeb8b5fa 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 311 3.0E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24685 61c46cb4c3dbe890092c91ae7c2ea6a9 149 Pfam PF04214 Protein of unknown function, DUF 53 120 1.7E-27 T 26-04-2016 IPR007332 Protein of unknown function DUF411 PAM18_RS00440 2054e9d6af77025190b52520a4534d65 261 SUPERFAMILY SSF144059 3 258 7.19E-92 T 26-04-2016 PAM18_RS00440 2054e9d6af77025190b52520a4534d65 261 PIRSF PIRSF029288 1 261 6.3E-103 T 26-04-2016 IPR009211 Predicted virulence protein, SciE type PAM18_RS00440 2054e9d6af77025190b52520a4534d65 261 Gene3D G3DSA:1.25.40.10 3 62 8.7E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS00440 2054e9d6af77025190b52520a4534d65 261 Pfam PF07024 ImpE protein 139 254 1.1E-43 T 26-04-2016 IPR009211 Predicted virulence protein, SciE type PAM18_RS05000 b5db29291d125203ea7ee7078c7a5bbd 144 SUPERFAMILY SSF54593 8 133 9.83E-22 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS05000 b5db29291d125203ea7ee7078c7a5bbd 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 127 2.5E-5 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS05000 b5db29291d125203ea7ee7078c7a5bbd 144 PANTHER PTHR35006 8 141 2.0E-48 T 26-04-2016 PAM18_RS05000 b5db29291d125203ea7ee7078c7a5bbd 144 Gene3D G3DSA:3.10.180.10 6 128 8.0E-27 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS23750 57d21f1e437f2f025996eb5b328bf8ac 1163 SUPERFAMILY SSF50998 671 950 3.53E-12 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS23750 57d21f1e437f2f025996eb5b328bf8ac 1163 Pfam PF05567 Neisseria PilC beta-propeller domain 637 1003 1.5E-223 T 26-04-2016 IPR008707 PilC beta-propeller domain PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 8.9E-108 T 26-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 PANTHER PTHR30335:SF1 2 202 1.1E-139 T 26-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 PIRSF PIRSF006102 1 202 5.1E-59 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 PANTHER PTHR30335 2 202 1.1E-139 T 26-04-2016 PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.042 T 26-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 PAM18_RS10095 a6ad112fb16b83ef9937f49345302b92 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 2.6E-56 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 PANTHER PTHR38779:SF1 3 124 1.4E-72 T 26-04-2016 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.6E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 SUPERFAMILY SSF54523 41 120 2.04E-13 T 26-04-2016 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 PANTHER PTHR38779 3 124 1.4E-72 T 26-04-2016 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF13633 Prokaryotic N-terminal methylation site 8 33 8.3E-12 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 Gene3D G3DSA:3.30.1300.30 41 118 1.3E-7 T 26-04-2016 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF02501 Type II secretion system (T2SS), protein I 43 120 6.6E-19 T 26-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PAM18_RS22255 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 107 1.2E-36 T 26-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 PAM18_RS13870 a0c04c54de8348310ada04051a8d3e88 310 Pfam PF00294 pfkB family carbohydrate kinase 4 304 2.3E-28 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB PAM18_RS13870 a0c04c54de8348310ada04051a8d3e88 310 PANTHER PTHR10584 3 310 3.5E-91 T 26-04-2016 PAM18_RS13870 a0c04c54de8348310ada04051a8d3e88 310 Gene3D G3DSA:3.40.1190.20 2 309 7.6E-55 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS13870 a0c04c54de8348310ada04051a8d3e88 310 SUPERFAMILY SSF53613 3 305 1.14E-57 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS13870 a0c04c54de8348310ada04051a8d3e88 310 PANTHER PTHR10584:SF161 3 310 3.5E-91 T 26-04-2016 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 Pfam PF00326 Prolyl oligopeptidase family 466 681 2.9E-69 T 26-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 632 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 592 607 1.7E-51 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 SUPERFAMILY SSF53474 417 660 1.52E-42 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 12 402 2.5E-78 T 26-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 Gene3D G3DSA:3.40.50.1820 418 663 1.1E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 Gene3D G3DSA:2.130.10.120 65 405 4.2E-92 T 26-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PANTHER PTHR11757:SF3 1 682 0.0 T 26-04-2016 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 SUPERFAMILY SSF50993 2 410 6.8E-87 T 26-04-2016 PAM18_RS18425 7f1d37274744684d82c7415f39406215 683 PANTHER PTHR11757 1 682 0.0 T 26-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 PAM18_RS19535 05a3060b2e126d835928f12f1542ee28 211 Pfam PF12697 Alpha/beta hydrolase family 24 203 8.7E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS19535 05a3060b2e126d835928f12f1542ee28 211 Gene3D G3DSA:3.40.50.1820 141 203 4.5E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19535 05a3060b2e126d835928f12f1542ee28 211 Gene3D G3DSA:3.40.50.1820 37 87 4.5E-20 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19535 05a3060b2e126d835928f12f1542ee28 211 SUPERFAMILY SSF53474 36 89 1.04E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19535 05a3060b2e126d835928f12f1542ee28 211 SUPERFAMILY SSF53474 145 207 1.04E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS23635 7c5c7fefd7a621d02125bf7df2692ad9 209 SUPERFAMILY SSF52980 1 209 1.34E-126 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS23635 7c5c7fefd7a621d02125bf7df2692ad9 209 Pfam PF08682 Putative endonuclease, protein of unknown function (DUF1780) 2 209 2.9E-131 T 26-04-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease PAM18_RS23635 7c5c7fefd7a621d02125bf7df2692ad9 209 Gene3D G3DSA:3.40.1540.10 1 209 1.4E-127 T 26-04-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 Pfam PF00892 EamA-like transporter family 16 148 2.5E-15 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 Pfam PF00892 EamA-like transporter family 159 286 3.3E-8 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 PANTHER PTHR22911 12 292 1.3E-129 T 26-04-2016 PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 SUPERFAMILY SSF103481 195 291 1.44E-14 T 26-04-2016 PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 PANTHER PTHR22911:SF70 12 292 1.3E-129 T 26-04-2016 PAM18_RS01185 35315f548a31df78a0f34c1373ec7507 292 SUPERFAMILY SSF103481 53 152 1.96E-14 T 26-04-2016 PAM18_RS15485 84797f0db772d3651a40f5f814a16b1b 140 SUPERFAMILY SSF54593 5 130 3.62E-27 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS15485 84797f0db772d3651a40f5f814a16b1b 140 Gene3D G3DSA:3.10.180.10 2 128 1.8E-23 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS15485 84797f0db772d3651a40f5f814a16b1b 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 3.8E-9 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS16530 12910a3bd026c33718c14b61b079207d 129 Pfam PF12680 SnoaL-like domain 8 114 7.2E-17 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS16530 12910a3bd026c33718c14b61b079207d 129 SUPERFAMILY SSF54427 1 127 4.27E-37 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16530 12910a3bd026c33718c14b61b079207d 129 PANTHER PTHR41252 1 129 1.1E-41 T 26-04-2016 PAM18_RS16530 12910a3bd026c33718c14b61b079207d 129 Gene3D G3DSA:3.10.450.50 1 127 5.3E-40 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 PANTHER PTHR15704 471 762 9.1E-262 T 26-04-2016 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 PANTHER PTHR15704 1 451 9.1E-262 T 26-04-2016 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 393 438 1.14E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 485 529 1.14E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 195 293 1.14E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 PANTHER PTHR15704:SF8 471 762 9.1E-262 T 26-04-2016 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 PANTHER PTHR15704:SF8 1 451 9.1E-262 T 26-04-2016 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 469 536 4.55E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 232 443 7.6E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS20300 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 476 528 7.6E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 Gene3D G3DSA:3.40.190.100 116 253 1.1E-41 T 26-04-2016 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 PANTHER PTHR30177 28 305 3.6E-207 T 26-04-2016 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 SUPERFAMILY SSF53850 28 317 1.56E-74 T 26-04-2016 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 PANTHER PTHR30177:SF14 28 305 3.6E-207 T 26-04-2016 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 301 5.6E-66 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 Gene3D G3DSA:3.40.190.10 254 312 2.6E-18 T 26-04-2016 PAM18_RS26640 2dd24b7656b004ec24b6b92eaf4ea701 322 Gene3D G3DSA:3.40.190.10 31 115 2.6E-18 T 26-04-2016 PAM18_RS12475 8f013a9863e2a7b6ce89847d5044e237 116 Pfam PF00145 C-5 cytosine-specific DNA methylase 43 101 7.7E-7 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12475 8f013a9863e2a7b6ce89847d5044e237 116 Gene3D G3DSA:3.90.120.10 40 94 5.7E-10 T 26-04-2016 PAM18_RS12475 8f013a9863e2a7b6ce89847d5044e237 116 SUPERFAMILY SSF53335 38 101 4.71E-11 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16815 085d67ee6e1b19f09bdbedd3dbda1db4 179 SUPERFAMILY SSF50630 27 165 6.35E-40 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS16815 085d67ee6e1b19f09bdbedd3dbda1db4 179 Pfam PF05618 Putative ATP-dependant zinc protease 27 168 2.8E-51 T 26-04-2016 PAM18_RS16815 085d67ee6e1b19f09bdbedd3dbda1db4 179 Gene3D G3DSA:2.40.70.10 24 160 2.2E-44 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS16815 085d67ee6e1b19f09bdbedd3dbda1db4 179 PANTHER PTHR38037 1 179 2.6E-62 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 Gene3D G3DSA:3.30.420.40 4 134 1.3E-42 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 SUPERFAMILY SSF53067 109 214 3.37E-25 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 SUPERFAMILY SSF53067 4 106 3.11E-28 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 216 7.2E-62 T 26-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 PANTHER PTHR11735 1 145 1.4E-55 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 PANTHER PTHR11735:SF11 1 145 1.4E-55 T 26-04-2016 PAM18_RS06385 27e3a8e2d490c7904564710d9063a06c 226 Pfam PF00814 Glycoprotease family 32 150 3.2E-28 T 26-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 2 498 45.174 T 26-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Gene3D G3DSA:1.10.3550.10 126 159 1.9E-30 T 26-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Gene3D G3DSA:1.10.3550.10 388 496 1.9E-30 T 26-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 PANTHER PTHR11373:SF29 29 145 5.8E-80 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 PANTHER PTHR11373:SF29 170 335 5.8E-80 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 PANTHER PTHR11373 29 145 5.8E-80 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 PANTHER PTHR11373 170 335 5.8E-80 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Pfam PF01966 HD domain 71 137 5.8E-8 T 26-04-2016 IPR006674 HD domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Gene3D G3DSA:1.10.3410.10 258 387 3.0E-29 T 26-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 SMART SM00471 67 271 7.7E-10 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 SUPERFAMILY SSF109604 240 429 2.69E-58 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 SUPERFAMILY SSF109604 478 493 2.69E-58 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 SUPERFAMILY SSF109604 170 203 2.69E-58 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 SUPERFAMILY SSF109604 36 137 2.69E-58 T 26-04-2016 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 496 3.8E-108 T 26-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Gene3D G3DSA:1.10.3210.10 171 257 5.4E-59 T 26-04-2016 IPR006674 HD domain PAM18_RS19960 5fa151fa52c1770216c256853b864b2d 498 Gene3D G3DSA:1.10.3210.10 6 125 5.4E-59 T 26-04-2016 IPR006674 HD domain PAM18_RS01060 fbf4548919ea53766bfd1dc603a2e64b 134 Pfam PF03817 Malonate transporter MadL subunit 1 117 2.3E-50 T 26-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 PAM18_RS01060 fbf4548919ea53766bfd1dc603a2e64b 134 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 120 7.3E-46 T 26-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 157 171 4.0E-7 T 26-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 178 194 4.0E-7 T 26-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 134 153 4.0E-7 T 26-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 243 257 4.0E-7 T 26-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 SUPERFAMILY SSF55869 34 95 3.14E-23 T 26-04-2016 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 SUPERFAMILY SSF56349 90 306 1.63E-67 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 Gene3D G3DSA:3.90.15.10 99 229 3.4E-41 T 26-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 Gene3D G3DSA:1.20.120.380 244 314 2.5E-17 T 26-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 PAM18_RS14365 9ef65207394e3cf3c2f863ca53cf83e9 333 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 94 268 1.0E-28 T 26-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 PAM18_RS20440 1e18c914e6d02e944ca98c9ceb729fce 99 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 7.2E-19 T 26-04-2016 IPR009525 Protein of unknown function DUF1145 PAM18_RS20440 1e18c914e6d02e944ca98c9ceb729fce 99 PANTHER PTHR38775 2 92 2.9E-32 T 26-04-2016 PAM18_RS20440 1e18c914e6d02e944ca98c9ceb729fce 99 PANTHER PTHR38775:SF1 2 92 2.9E-32 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153 752 855 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153 1 464 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153 487 711 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153 878 1259 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 Pfam PF14331 ImcF-related N-terminal domain 115 352 1.6E-49 T 26-04-2016 IPR025743 ImcF-related, N-terminal domain PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153:SF1 752 855 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153:SF1 1 464 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153:SF1 487 711 0.0 T 26-04-2016 PAM18_RS13785 d23f55da32120ab5843eda2285fd306b 1271 PANTHER PTHR36153:SF1 878 1259 0.0 T 26-04-2016 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 Pfam PF13563 2'-5' RNA ligase superfamily 15 155 5.3E-11 T 26-04-2016 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 171 1.2E-28 T 26-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 SUPERFAMILY SSF55144 7 173 1.46E-39 T 26-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 171 18.628 T 26-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 PANTHER PTHR35561:SF1 1 173 5.5E-54 T 26-04-2016 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 PANTHER PTHR35561 1 173 5.5E-54 T 26-04-2016 PAM18_RS10780 332ac64b22bd23fe1f0cd9d70d0fb408 182 Gene3D G3DSA:3.90.1140.10 7 175 9.2E-44 T 26-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 Gene3D G3DSA:2.60.40.420 31 181 1.2E-47 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 PANTHER PTHR38439:SF1 42 83 3.3E-12 T 26-04-2016 PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 PANTHER PTHR38439:SF1 104 181 3.3E-12 T 26-04-2016 PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 45 180 1.8E-10 T 26-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 SUPERFAMILY SSF49503 42 180 1.12E-31 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 PANTHER PTHR38439 42 83 3.3E-12 T 26-04-2016 PAM18_RS11065 adcb7871935782b558b5e99b68cf6cd4 181 PANTHER PTHR38439 104 181 3.3E-12 T 26-04-2016 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 Pfam PF02308 MgtC family 31 154 4.6E-35 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 PANTHER PTHR33778 1 155 1.4E-57 T 26-04-2016 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 53 71 2.9E-37 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 34 53 2.9E-37 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 80 102 2.9E-37 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS14840 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 109 133 2.9E-37 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PANTHER PTHR11444 6 468 3.2E-275 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF10415 Fumarase C C-terminus 413 465 2.7E-19 T 26-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.9E-28 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-28 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.9E-28 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.9E-28 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.20.200.10 144 422 4.7E-88 T 26-04-2016 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 SUPERFAMILY SSF48557 7 465 1.31E-144 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.275.10 7 143 1.3E-55 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.40.30 423 468 3.1E-20 T 26-04-2016 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 PANTHER PTHR11444:SF25 6 468 3.2E-275 T 26-04-2016 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 467 1.7E-206 T 26-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 PAM18_RS28365 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF00206 Lyase 15 347 1.9E-111 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 392 4.2E-81 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 Gene3D G3DSA:2.40.50.100 88 122 3.7E-24 T 26-04-2016 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 Gene3D G3DSA:2.40.50.100 197 232 3.7E-24 T 26-04-2016 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 Pfam PF13533 Biotin-lipoyl like 89 136 4.4E-15 T 26-04-2016 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 PANTHER PTHR30469 3 403 4.2E-181 T 26-04-2016 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 Pfam PF13437 HlyD family secretion protein 200 302 5.4E-9 T 26-04-2016 PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 PANTHER PTHR30469:SF12 3 403 4.2E-181 T 26-04-2016 IPR022824 Multidrug resistance protein MdtA PAM18_RS12940 2dbb8996ee5b69853d1951ed270df309 426 SUPERFAMILY SSF111369 78 315 1.57E-60 T 26-04-2016 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 SMART SM00486 151 558 1.6E-62 T 26-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 7.1E-10 T 26-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 7.1E-10 T 26-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 7.1E-10 T 26-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 26-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 Gene3D G3DSA:3.30.420.10 151 368 9.4E-35 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 Gene3D G3DSA:3.90.1600.10 515 560 3.2E-10 T 26-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 Gene3D G3DSA:3.90.1600.10 400 434 3.2E-10 T 26-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 PANTHER PTHR10322 72 788 4.8E-209 T 26-04-2016 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 299 1.7E-11 T 26-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 Pfam PF00136 DNA polymerase family B 380 741 8.7E-39 T 26-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 SUPERFAMILY SSF53098 6 392 7.59E-95 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS16170 3d61fc3f39ce6084370f702a752e2705 788 SUPERFAMILY SSF56672 388 782 3.89E-113 T 26-04-2016 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 Gene3D G3DSA:3.40.50.720 1 144 4.6E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 SMART SM00859 6 120 2.4E-22 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 Gene3D G3DSA:3.30.360.10 145 314 1.9E-46 T 26-04-2016 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 318 4.6E-33 T 26-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 PANTHER PTHR10174 159 336 1.7E-31 T 26-04-2016 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 SUPERFAMILY SSF51735 5 154 6.4E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 8.4E-24 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 PIRSF PIRSF000148 4 336 4.2E-86 T 26-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 PAM18_RS09485 59dd88adb32244ea262b3b5bf6c95be2 336 SUPERFAMILY SSF55347 135 319 1.6E-47 T 26-04-2016 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 Pfam PF00444 Ribosomal protein L36 1 38 5.4E-21 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 26-04-2016 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 SUPERFAMILY SSF57840 1 38 2.75E-17 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 6.0E-22 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 PANTHER PTHR18804 1 38 1.9E-19 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.137 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03530 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 Pfam PF00672 HAMP domain 208 274 4.2E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 1.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 1.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 1.5E-11 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SMART SM00387 375 480 2.6E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SMART SM00304 226 278 3.6E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF158472 228 276 6.54E-5 T 26-04-2016 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF47384 263 322 1.79E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 Gene3D G3DSA:3.30.565.10 324 479 4.4E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 477 1.4E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 Gene3D G3DSA:1.10.287.130 269 323 2.2E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 317 5.3E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PANTHER PTHR24423 220 478 1.5E-46 T 26-04-2016 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 PANTHER PTHR24423 1 12 1.5E-46 T 26-04-2016 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SMART SM00388 279 337 1.8E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS09130 e402a09417f503097ac75adf0e849339 482 SUPERFAMILY SSF55874 338 478 4.58E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS27230 d56fa5e0130230b74959dc880f5de15b 225 PANTHER PTHR36536:SF3 1 225 1.8E-130 T 26-04-2016 PAM18_RS27230 d56fa5e0130230b74959dc880f5de15b 225 Pfam PF01865 Protein of unknown function DUF47 7 224 1.1E-59 T 26-04-2016 IPR018445 Putative phosphate transport regulator PAM18_RS27230 d56fa5e0130230b74959dc880f5de15b 225 PANTHER PTHR36536 1 225 1.8E-130 T 26-04-2016 PAM18_RS27230 d56fa5e0130230b74959dc880f5de15b 225 SUPERFAMILY SSF109755 37 209 1.1E-9 T 26-04-2016 PAM18_RS27230 d56fa5e0130230b74959dc880f5de15b 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 8 224 4.3E-54 T 26-04-2016 IPR002727 Protein of unknown function DUF47 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 Gene3D G3DSA:3.40.190.10 92 197 3.2E-37 T 26-04-2016 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.5E-16 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 Pfam PF03466 LysR substrate binding domain 90 277 2.2E-15 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 SUPERFAMILY SSF53850 84 289 2.71E-22 T 26-04-2016 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 SUPERFAMILY SSF46785 2 110 4.99E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 290 3.9E-113 T 26-04-2016 IPR017685 HTH-type transcriptional regulator ArgP PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 PANTHER PTHR30579:SF2 1 289 2.7E-136 T 26-04-2016 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 295 55.892 T 26-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 Gene3D G3DSA:1.10.10.10 3 72 1.9E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS22760 4c2f3f53a49297ae480cc76157db92d8 298 PANTHER PTHR30579 1 289 2.7E-136 T 26-04-2016 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 8.4E-62 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 75.469 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 Pfam PF01220 Dehydroquinase class II 4 140 2.4E-59 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 SUPERFAMILY SSF52304 3 145 2.75E-63 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 Gene3D G3DSA:3.40.50.9100 3 145 3.5E-67 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 PANTHER PTHR21272 1 146 1.1E-90 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 PIRSF PIRSF001399 1 146 1.1E-58 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 143 3.0E-69 T 26-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS25375 fc0d747fc3254ba82f4319ee979026f0 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 26-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 PAM18_RS20010 6c00cbf1288d885f07b6fa5d0bf9eb57 111 PANTHER PTHR37549 1 111 8.7E-46 T 26-04-2016 PAM18_RS20010 6c00cbf1288d885f07b6fa5d0bf9eb57 111 PIRSF PIRSF037256 1 111 7.7E-56 T 26-04-2016 IPR017160 Uncharacterised conserved protein UCP037256 PAM18_RS20010 6c00cbf1288d885f07b6fa5d0bf9eb57 111 PANTHER PTHR37549:SF1 1 111 8.7E-46 T 26-04-2016 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 Pfam PF00202 Aminotransferase class-III 28 439 2.0E-123 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 442 7.5E-175 T 26-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 Gene3D G3DSA:3.40.640.10 66 342 2.2E-93 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 SUPERFAMILY SSF53383 10 442 1.94E-130 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 49.782 T 26-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 PANTHER PTHR11986:SF8 6 452 1.9E-217 T 26-04-2016 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 PANTHER PTHR11986 6 452 1.9E-217 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 Gene3D G3DSA:3.90.1150.10 344 445 4.6E-55 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS02125 ade2dee9ecd1103b1e8ef0629e7aa92d 467 Gene3D G3DSA:3.90.1150.10 5 65 4.6E-55 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 Gene3D G3DSA:2.60.120.280 16 151 1.7E-22 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 Gene3D G3DSA:1.10.10.60 175 225 1.6E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 Pfam PF12833 Helix-turn-helix domain 194 272 4.0E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 Gene3D G3DSA:1.10.10.60 226 272 2.3E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 PANTHER PTHR11019:SF108 16 278 9.3E-159 T 26-04-2016 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 SMART SM00342 188 270 1.7E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 PANTHER PTHR11019 16 278 9.3E-159 T 26-04-2016 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 Pfam PF02311 AraC-like ligand binding domain 16 148 7.8E-31 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF51215 15 154 9.42E-28 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF46689 224 274 3.32E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10495 91a737f9e6a2567b1e3f15b8952f4f86 278 SUPERFAMILY SSF46689 175 222 6.54E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 Gene3D G3DSA:1.10.260.40 11 109 3.2E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 PANTHER PTHR10245:SF53 10 182 1.0E-62 T 26-04-2016 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 Pfam PF07883 Cupin domain 115 183 5.4E-15 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 SUPERFAMILY SSF47413 8 73 6.48E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 Gene3D G3DSA:2.60.120.10 110 183 9.1E-19 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 PANTHER PTHR10245 10 182 1.0E-62 T 26-04-2016 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 Pfam PF01381 Helix-turn-helix 15 69 1.3E-10 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 SMART SM00530 14 69 4.4E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS02710 0f1e5688c45cd75bba9f17d6d95756c0 184 SUPERFAMILY SSF51182 55 182 2.03E-25 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 PANTHER PTHR33490:SF6 1 308 4.6E-102 T 26-04-2016 PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 SMART SM00460 192 262 2.9E-23 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 PANTHER PTHR33490 1 308 4.6E-102 T 26-04-2016 PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 Pfam PF01841 Transglutaminase-like superfamily 153 260 8.7E-24 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 SUPERFAMILY SSF54001 130 287 1.67E-45 T 26-04-2016 PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 Gene3D G3DSA:3.90.260.10 195 267 4.2E-13 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS25775 79ae8461569b478e114bd2e362d1142f 311 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 16 95 1.8E-24 T 26-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal PAM18_RS21685 0f18f1acb72b6dafdaa55882806c2c7e 271 PANTHER PTHR30269:SF7 1 269 1.2E-155 T 26-04-2016 PAM18_RS21685 0f18f1acb72b6dafdaa55882806c2c7e 271 Pfam PF01925 Sulfite exporter TauE/SafE 6 268 2.0E-37 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS21685 0f18f1acb72b6dafdaa55882806c2c7e 271 PANTHER PTHR30269 1 269 1.2E-155 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 SMART SM00862 144 219 4.9E-24 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 PANTHER PTHR26402 1 220 2.7E-105 T 26-04-2016 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 Gene3D G3DSA:1.10.10.10 124 220 6.5E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 Pfam PF00072 Response regulator receiver domain 3 111 5.1E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 Gene3D G3DSA:3.40.50.2300 1 123 6.9E-38 T 26-04-2016 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 9.1E-26 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 8.3E-105 T 26-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 SMART SM00448 1 111 1.3E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 PANTHER PTHR26402:SF575 1 220 2.7E-105 T 26-04-2016 PAM18_RS25570 0691f858313238c0b2490bb76da7a181 229 SUPERFAMILY SSF52172 1 178 8.9E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS24830 2699994ded963183c12247d4b1983706 304 PANTHER PTHR13767:SF2 2 302 1.1E-137 T 26-04-2016 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 Gene3D G3DSA:2.30.130.10 244 303 4.2E-26 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS24830 2699994ded963183c12247d4b1983706 304 SUPERFAMILY SSF88697 245 303 4.97E-14 T 26-04-2016 IPR015947 PUA-like domain PAM18_RS24830 2699994ded963183c12247d4b1983706 304 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 3.0E-20 T 26-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal PAM18_RS24830 2699994ded963183c12247d4b1983706 304 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 302 19.341 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 5.2E-57 T 26-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 SUPERFAMILY SSF55120 11 241 4.03E-84 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.7E-80 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 PANTHER PTHR13767 2 302 1.1E-137 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS24830 2699994ded963183c12247d4b1983706 304 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 302 2.7E-20 T 26-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 PANTHER PTHR30137:SF2 1 328 1.1E-147 T 26-04-2016 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 Pfam PF00296 Luciferase-like monooxygenase 24 306 6.1E-39 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 3.9E-130 T 26-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 Gene3D G3DSA:3.20.20.30 8 328 4.6E-89 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 SUPERFAMILY SSF51679 7 328 2.88E-85 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13165 3d79c3a9a46a4180d40739e51ac42701 333 PANTHER PTHR30137 1 328 1.1E-147 T 26-04-2016 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 PIRSF PIRSF015753 3 313 1.0E-129 T 26-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 193 264 3.4E-13 T 26-04-2016 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 Gene3D G3DSA:1.20.1050.10 161 277 3.6E-26 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 52 147 1.6E-21 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 PANTHER PTHR32419 1 318 2.1E-172 T 26-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 SUPERFAMILY SSF52833 35 151 1.06E-13 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 SUPERFAMILY SSF47616 172 314 9.61E-37 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 PANTHER PTHR32419:SF6 1 318 2.1E-172 T 26-04-2016 PAM18_RS12145 333108947deefe5669b67d1b3fc6407d 324 Gene3D G3DSA:3.40.30.10 34 160 1.4E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 SUPERFAMILY SSF52402 133 269 9.21E-16 T 26-04-2016 PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 Gene3D G3DSA:3.40.50.620 1 118 2.2E-20 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 Gene3D G3DSA:3.40.50.620 119 270 6.6E-20 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 SUPERFAMILY SSF52402 1 124 8.12E-23 T 26-04-2016 PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 PRINTS PR01438 Universal stress protein signature 133 151 1.2E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 PRINTS PR01438 Universal stress protein signature 231 243 1.2E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 PRINTS PR01438 Universal stress protein signature 249 271 1.2E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 Pfam PF00582 Universal stress protein family 1 124 3.8E-21 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS26300 c517301d42e5fe0ef688dc98819d58a5 271 Pfam PF00582 Universal stress protein family 133 270 1.3E-15 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 Gene3D G3DSA:4.10.520.10 2 93 2.1E-29 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 SUPERFAMILY SSF47729 3 92 7.65E-28 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 3.0E-28 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 SMART SM00411 3 92 1.2E-28 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.6E-11 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.6E-11 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.6E-11 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 PAM18_RS05080 1f51be8b5f25b377479cee1b71978da1 93 PANTHER PTHR33175 2 93 2.7E-35 T 26-04-2016 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 Gene3D G3DSA:3.40.50.2300 184 317 7.8E-21 T 26-04-2016 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 Gene3D G3DSA:3.40.50.2300 65 183 7.9E-43 T 26-04-2016 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 9.1E-13 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 Gene3D G3DSA:1.10.260.40 12 64 3.9E-21 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 PANTHER PTHR30146:SF27 10 339 3.8E-231 T 26-04-2016 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 SMART SM00354 11 82 3.2E-25 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 SUPERFAMILY SSF47413 11 70 9.38E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 SUPERFAMILY SSF53822 69 330 2.94E-60 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 PANTHER PTHR30146 10 339 3.8E-231 T 26-04-2016 PAM18_RS14290 7b9c1a37111a52ef0c60403240513154 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 72 331 9.6E-22 T 26-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PANTHER PTHR30195:SF12 7 526 1.9E-130 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 Pfam PF02384 N-6 DNA Methylase 168 504 4.5E-58 T 26-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 SUPERFAMILY SSF53335 7 47 1.16E-113 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11510 639463afbc9439810631a48d971b0127 554 SUPERFAMILY SSF53335 81 514 1.16E-113 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11510 639463afbc9439810631a48d971b0127 554 Gene3D G3DSA:3.40.50.150 192 233 3.4E-42 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11510 639463afbc9439810631a48d971b0127 554 Gene3D G3DSA:3.40.50.150 269 423 3.4E-42 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11510 639463afbc9439810631a48d971b0127 554 Pfam PF12161 HsdM N-terminal domain 8 149 9.3E-21 T 26-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 315 327 1.8E-20 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 1.8E-20 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 343 367 1.8E-20 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 205 1.8E-20 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 PANTHER PTHR30195 7 526 1.9E-130 T 26-04-2016 PAM18_RS11510 639463afbc9439810631a48d971b0127 554 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 318 324 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 Pfam PF07690 Major Facilitator Superfamily 25 283 1.3E-34 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 Gene3D G3DSA:1.20.1250.20 19 211 1.1E-36 T 26-04-2016 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 Gene3D G3DSA:1.20.1250.20 226 417 8.8E-22 T 26-04-2016 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 SUPERFAMILY SSF103473 19 416 1.31E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PANTHER PTHR23504:SF18 8 412 1.1E-153 T 26-04-2016 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 150 172 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 120 141 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 266 286 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 31 47 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 319 339 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 93 117 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 178 198 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 354 377 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PRINTS PR01035 Tetracycline resistance protein signature 294 315 1.1E-55 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PAM18_RS19925 90cd040579ed3ff56e1c8b6b0d06b7dd 422 PANTHER PTHR23504 8 412 1.1E-153 T 26-04-2016 PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 SMART SM00448 8 121 6.9E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 Pfam PF00072 Response regulator receiver domain 10 121 3.2E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 SUPERFAMILY SSF52172 5 126 1.85E-35 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 Gene3D G3DSA:3.40.50.2300 5 125 9.4E-36 T 26-04-2016 PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 PANTHER PTHR26402 8 125 4.3E-94 T 26-04-2016 PAM18_RS02065 cc243581fe7fcac6c3b1e574010a0de6 135 PANTHER PTHR26402:SF568 8 125 4.3E-94 T 26-04-2016 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 PANTHER PTHR10443:SF24 9 251 1.4E-189 T 26-04-2016 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 PANTHER PTHR10443:SF24 276 323 1.4E-189 T 26-04-2016 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 6 320 2.9E-93 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 PANTHER PTHR10443 9 251 1.4E-189 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 PANTHER PTHR10443 276 323 1.4E-189 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 Gene3D G3DSA:3.20.20.140 5 324 1.2E-96 T 26-04-2016 PAM18_RS28200 6ab01b69bbe57852e6852e9f863dd24b 325 SUPERFAMILY SSF51556 9 324 1.36E-82 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 1.9E-23 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 SUPERFAMILY SSF55083 5 152 4.05E-38 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 PANTHER PTHR20941:SF12 3 163 2.4E-89 T 26-04-2016 PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 130 1.8E-22 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 Gene3D G3DSA:3.30.70.560 6 151 1.3E-35 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 PAM18_RS02955 ad0f22af5f95b1442c7157571fda74f8 180 PANTHER PTHR20941 3 163 2.4E-89 T 26-04-2016 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 18 161 1.1E-50 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 17 321 41.802 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 18 319 5.2E-91 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 7.7E-18 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 7.7E-18 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 150 161 7.7E-18 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 7.7E-18 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PANTHER PTHR11405:SF16 1 329 7.5E-135 T 26-04-2016 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 SUPERFAMILY SSF53671 17 321 3.8E-95 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PANTHER PTHR11405 1 329 7.5E-135 T 26-04-2016 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 316 1.0E-23 T 26-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 149 166 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 54 76 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 92 101 3.4E-31 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 162 298 1.9E-48 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PAM18_RS02035 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 162 1.7E-38 T 26-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PAM18_RS05270 d25e4618f67c4c4ec5510c654766e7a7 153 SUPERFAMILY SSF89872 25 153 2.49E-51 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS05270 d25e4618f67c4c4ec5510c654766e7a7 153 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 36 151 6.4E-42 T 26-04-2016 PAM18_RS05270 d25e4618f67c4c4ec5510c654766e7a7 153 Gene3D G3DSA:3.40.1420.10 26 153 4.7E-50 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS05270 d25e4618f67c4c4ec5510c654766e7a7 153 PIRSF PIRSF009103 1 153 1.6E-62 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 PANTHER PTHR30173 10 168 1.6E-46 T 26-04-2016 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 PANTHER PTHR30173:SF9 10 168 1.6E-46 T 26-04-2016 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 Pfam PF08281 Sigma-70, region 4 112 163 2.4E-16 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 SUPERFAMILY SSF88659 90 166 2.62E-15 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 Gene3D G3DSA:1.10.10.10 108 168 3.7E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 SUPERFAMILY SSF88946 10 100 9.02E-15 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 165 3.0E-22 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 Gene3D G3DSA:1.10.1740.10 9 103 2.3E-11 T 26-04-2016 PAM18_RS16035 0585ba6662f3ffdf151be4f52a1db0cc 168 Pfam PF04542 Sigma-70 region 2 15 80 7.7E-15 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 Gene3D G3DSA:3.40.605.10 4 261 2.4E-92 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.8E-136 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 PANTHER PTHR11699 4 497 0.0 T 26-04-2016 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 PANTHER PTHR11699:SF181 4 497 0.0 T 26-04-2016 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 SUPERFAMILY SSF53720 3 483 3.14E-145 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 26-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 4.6E-279 T 26-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 PAM18_RS07290 cd60021924a1bbf5e038ed5250cfc7bf 497 Gene3D G3DSA:3.40.309.10 262 442 1.7E-62 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS17135 71ae2168876ff05ddbc76cda69aaa7d0 144 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 3 140 7.0E-72 T 26-04-2016 IPR013405 Type III secretion system regulator, LcrR PAM18_RS17135 71ae2168876ff05ddbc76cda69aaa7d0 144 Pfam PF09621 Type III secretion system regulator (LcrR) 3 140 7.3E-71 T 26-04-2016 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 PIRSF PIRSF000521 18 458 8.8E-25 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 Gene3D G3DSA:3.40.640.10 75 353 1.6E-73 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 Pfam PF00202 Aminotransferase class-III 37 452 7.7E-89 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 PANTHER PTHR11986:SF72 15 463 0.0 T 26-04-2016 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 SUPERFAMILY SSF53383 20 457 1.57E-113 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 PANTHER PTHR11986 15 463 0.0 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 Gene3D G3DSA:3.90.1150.10 15 74 1.8E-40 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS25160 865ffc96e3b42d4337abb7eb9240809e 468 Gene3D G3DSA:3.90.1150.10 355 459 1.8E-40 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 128 1.6E-10 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 380 3.0E-20 T 26-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF47203 233 399 1.93E-26 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 PANTHER PTHR10909:SF300 8 383 3.0E-219 T 26-04-2016 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 PIRSF PIRSF016578 7 396 2.6E-30 T 26-04-2016 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.10.540.10 9 119 8.6E-30 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:2.40.110.10 146 223 3.3E-21 T 26-04-2016 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.20.140.10 224 401 2.3E-56 T 26-04-2016 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 15 404 3.2E-197 T 26-04-2016 IPR023922 Sulphate-starvation-induced SfnB PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF56645 27 229 2.75E-48 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS13855 eebb2ba6588c893fb7582e64401fdfbf 405 PANTHER PTHR10909 8 383 3.0E-219 T 26-04-2016 PAM18_RS20635 eb7516fd430917af8dd34d6d2b2e97d5 83 SUPERFAMILY SSF64307 6 82 1.07E-22 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS20635 eb7516fd430917af8dd34d6d2b2e97d5 83 PANTHER PTHR33279 1 83 3.3E-22 T 26-04-2016 PAM18_RS20635 eb7516fd430917af8dd34d6d2b2e97d5 83 Gene3D G3DSA:3.30.110.40 11 82 1.5E-26 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS20635 eb7516fd430917af8dd34d6d2b2e97d5 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 15 39 - T 26-04-2016 IPR001455 TusA-like domain PAM18_RS20635 eb7516fd430917af8dd34d6d2b2e97d5 83 Pfam PF01206 Sulfurtransferase TusA 14 82 1.1E-21 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 39 189 3.5E-49 T 26-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 Gene3D G3DSA:3.30.1490.20 302 379 2.0E-9 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 PANTHER PTHR11609:SF4 175 507 1.4E-164 T 26-04-2016 PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 SUPERFAMILY SSF56059 289 496 4.28E-39 T 26-04-2016 PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 PANTHER PTHR11609 175 507 1.4E-164 T 26-04-2016 PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 Gene3D G3DSA:3.40.50.20 252 301 3.5E-5 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS15895 e67b5e603a38de4e2ea6e22efd1c394a 507 Pfam PF08443 RimK-like ATP-grasp domain 298 475 1.1E-8 T 26-04-2016 IPR013651 ATP-grasp fold, RimK-type PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00388 207 273 1.6E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF47384 205 271 5.69E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF55874 266 417 2.23E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:1.10.287.130 212 266 1.2E-4 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00387 315 419 5.4E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:3.30.565.10 282 417 5.7E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 417 6.1E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 269 5.6E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.3E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.3E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.3E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.3E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PANTHER PTHR24423 8 18 4.2E-31 T 26-04-2016 PAM18_RS23420 da4ffc84eaa02c19c608add6b5b30eb6 422 PANTHER PTHR24423 205 417 4.2E-31 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 PANTHER PTHR21535:SF37 1 326 2.6E-167 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:1.20.58.340 129 186 3.3E-4 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:3.30.460.20 25 124 3.2E-6 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF143865 1 265 2.35E-40 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:1.20.58.340 250 326 2.7E-27 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF144083 261 323 8.5E-20 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 PANTHER PTHR21535 1 326 2.6E-167 T 26-04-2016 PAM18_RS27535 47173f8fbd970ce3508496d969e6035e 326 Pfam PF01544 CorA-like Mg2+ transporter protein 28 321 5.3E-54 T 26-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PAM18_RS16795 3b9635f74e70703d4338465b66d96288 336 PANTHER PTHR11005 51 201 3.4E-23 T 26-04-2016 PAM18_RS16795 3b9635f74e70703d4338465b66d96288 336 SUPERFAMILY SSF53474 49 313 4.41E-35 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16795 3b9635f74e70703d4338465b66d96288 336 Gene3D G3DSA:3.40.50.1820 39 313 1.6E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS16795 3b9635f74e70703d4338465b66d96288 336 Pfam PF12697 Alpha/beta hydrolase family 58 265 3.5E-12 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS27550 8993de498dfad04ad14320ed6368f580 77 Pfam PF06146 Phosphate-starvation-inducible E 7 71 3.8E-15 T 26-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like PAM18_RS27550 8993de498dfad04ad14320ed6368f580 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.6E-44 T 26-04-2016 IPR013468 Conserved hypothetical protein CHP02647 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 PANTHER PTHR11699:SF198 4 480 1.5E-213 T 26-04-2016 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 SUPERFAMILY SSF53720 4 477 1.26E-138 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 Gene3D G3DSA:3.40.605.10 6 259 8.8E-70 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 PANTHER PTHR11699 4 480 1.5E-213 T 26-04-2016 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 Gene3D G3DSA:3.40.309.10 260 440 3.5E-62 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS14970 a94d0de6c4a097eae82949e86c232374 482 Pfam PF00171 Aldehyde dehydrogenase family 13 475 1.0E-140 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.8E-24 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.8E-24 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.8E-24 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.1E-34 T 26-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PANTHER PTHR34040 2 88 2.2E-43 T 26-04-2016 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.1E-26 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PANTHER PTHR34040:SF1 2 88 2.2E-43 T 26-04-2016 PAM18_RS17195 b247c0ca323f93920f157942e67bf7fd 88 PIRSF PIRSF004669 1 88 1.4E-25 T 26-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PAM18_RS28765 aa4b928925a49072fe27986416a20ab1 217 PANTHER PTHR11080:SF19 7 212 2.7E-75 T 26-04-2016 PAM18_RS28765 aa4b928925a49072fe27986416a20ab1 217 Pfam PF00857 Isochorismatase family 19 199 2.4E-35 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS28765 aa4b928925a49072fe27986416a20ab1 217 SUPERFAMILY SSF52499 7 209 4.19E-48 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS28765 aa4b928925a49072fe27986416a20ab1 217 PANTHER PTHR11080 7 212 2.7E-75 T 26-04-2016 PAM18_RS28765 aa4b928925a49072fe27986416a20ab1 217 Gene3D G3DSA:3.40.50.850 7 210 1.4E-53 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 26-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 PANTHER PTHR12818 2 228 2.1E-118 T 26-04-2016 PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 PANTHER PTHR12818:SF6 2 228 2.1E-118 T 26-04-2016 PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 Pfam PF01980 Uncharacterised protein family UPF0066 20 138 1.8E-41 T 26-04-2016 IPR023370 TsaA-like domain PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 143 1.6E-44 T 26-04-2016 IPR023370 TsaA-like domain PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 SUPERFAMILY SSF118196 2 218 9.55E-77 T 26-04-2016 IPR023370 TsaA-like domain PAM18_RS08110 967dd38b45b2e52a97e106b5d8e77b35 231 Gene3D G3DSA:2.40.30.70 4 149 2.7E-53 T 26-04-2016 IPR023370 TsaA-like domain PAM18_RS17940 a02468acfd347f7a99e66d50ff7da8c8 227 PANTHER PTHR42208:SF1 1 225 1.1E-75 T 26-04-2016 PAM18_RS17940 a02468acfd347f7a99e66d50ff7da8c8 227 PANTHER PTHR42208 1 225 1.1E-75 T 26-04-2016 PAM18_RS17940 a02468acfd347f7a99e66d50ff7da8c8 227 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 212 1.1E-55 T 26-04-2016 PAM18_RS11355 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 3 65 3.6E-17 T 26-04-2016 IPR007896 Chlorhexidine efflux transporter PAM18_RS11355 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 71 133 4.3E-23 T 26-04-2016 IPR007896 Chlorhexidine efflux transporter PAM18_RS11355 d9d4bdb12db35ccadaa129c6f4b6b975 147 PANTHER PTHR42641 1 147 6.6E-122 T 26-04-2016 PAM18_RS11355 d9d4bdb12db35ccadaa129c6f4b6b975 147 PANTHER PTHR42641:SF1 1 147 6.6E-122 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 Gene3D G3DSA:3.40.190.10 97 186 1.3E-19 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 PANTHER PTHR30346:SF11 7 305 2.4E-236 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 SUPERFAMILY SSF46785 5 116 4.17E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 6 302 7.5E-115 T 26-04-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.31E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.31E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.31E-9 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 PANTHER PTHR30346 7 305 2.4E-236 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 Gene3D G3DSA:3.40.190.10 187 267 1.7E-10 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 SUPERFAMILY SSF53850 97 304 4.35E-33 T 26-04-2016 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 Gene3D G3DSA:1.10.10.10 6 86 1.0E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.5E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00770 e06271044b6dff90a7643a6d99685dd3 305 Pfam PF03466 LysR substrate binding domain 95 301 1.0E-32 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 SUPERFAMILY SSF56935 477 742 2.05E-93 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 SUPERFAMILY SSF56935 35 446 2.05E-93 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 49 742 2.8E-91 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 PANTHER PTHR32552 535 742 0.0 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 PANTHER PTHR32552 10 518 0.0 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 Pfam PF00593 TonB dependent receptor 486 740 1.8E-16 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 PANTHER PTHR32552:SF30 535 742 0.0 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 PANTHER PTHR32552:SF30 10 518 0.0 T 26-04-2016 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 Gene3D G3DSA:2.170.130.10 34 151 9.9E-28 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 Gene3D G3DSA:2.40.170.20 152 742 2.6E-70 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS24460 eb387d6defa9973072e4f275b40cf38c 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 2.2E-19 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 Gene3D G3DSA:2.10.109.10 111 242 1.3E-14 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 SUPERFAMILY SSF47413 10 74 9.98E-13 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 SUPERFAMILY SSF51306 109 243 2.09E-21 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 SMART SM00530 15 69 2.0E-14 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 Pfam PF00717 Peptidase S24-like 159 224 5.0E-11 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 Gene3D G3DSA:1.10.260.40 12 74 6.0E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 PANTHER PTHR40661 10 250 7.8E-36 T 26-04-2016 PAM18_RS03095 caa3430308d9a13e3279cd0cf11b3066 256 Pfam PF01381 Helix-turn-helix 16 69 3.1E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS14415 c726372d37a93bcedc09de8f421ef076 256 Gene3D G3DSA:3.30.1950.10 52 127 1.2E-16 T 26-04-2016 PAM18_RS14415 c726372d37a93bcedc09de8f421ef076 256 Pfam PF02563 Polysaccharide biosynthesis/export protein 49 129 6.0E-14 T 26-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 PAM18_RS14415 c726372d37a93bcedc09de8f421ef076 256 PANTHER PTHR33619 3 232 1.4E-53 T 26-04-2016 PAM18_RS14415 c726372d37a93bcedc09de8f421ef076 256 Gene3D G3DSA:3.10.560.10 128 220 5.3E-13 T 26-04-2016 PAM18_RS21390 d3a7cf42730f514d1c6abac8bf6308f3 389 SUPERFAMILY SSF81296 26 210 1.01E-54 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS21390 d3a7cf42730f514d1c6abac8bf6308f3 389 PANTHER PTHR34823 1 388 6.6E-175 T 26-04-2016 PAM18_RS21390 d3a7cf42730f514d1c6abac8bf6308f3 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 207 1.3E-45 T 26-04-2016 IPR004302 Chitin-binding protein, N-terminal PAM18_RS21390 d3a7cf42730f514d1c6abac8bf6308f3 389 PANTHER PTHR34823:SF2 1 388 6.6E-175 T 26-04-2016 PAM18_RS21390 d3a7cf42730f514d1c6abac8bf6308f3 389 Gene3D G3DSA:2.70.50.50 26 210 6.8E-58 T 26-04-2016 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 214 2.0E-36 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 Pfam PF12833 Helix-turn-helix domain 264 340 4.6E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 Gene3D G3DSA:1.10.10.60 292 342 4.4E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 335 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 PANTHER PTHR11019 172 347 6.3E-46 T 26-04-2016 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 SUPERFAMILY SSF46689 292 341 6.27E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 SMART SM00342 257 339 5.5E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS27815 ae0b4f1c4ffddac2a8f565d36f9474d2 356 PANTHER PTHR11019:SF52 172 347 6.3E-46 T 26-04-2016 PAM18_RS21030 379586a6338939edb0cdbe53f7b131ca 881 PANTHER PTHR34697 23 871 0.0 T 26-04-2016 PAM18_RS21030 379586a6338939edb0cdbe53f7b131ca 881 PANTHER PTHR34697:SF2 23 871 0.0 T 26-04-2016 PAM18_RS21030 379586a6338939edb0cdbe53f7b131ca 881 SUPERFAMILY SSF55729 676 851 7.42E-16 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS21030 379586a6338939edb0cdbe53f7b131ca 881 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 42 329 1.1E-15 T 26-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PAM18_RS21030 379586a6338939edb0cdbe53f7b131ca 881 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 566 853 1.1E-92 T 26-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PAM18_RS14570 5a0b84d5ba2bae1693ba14e9059bb83f 114 PANTHER PTHR33336:SF5 1 105 5.4E-38 T 26-04-2016 PAM18_RS14570 5a0b84d5ba2bae1693ba14e9059bb83f 114 Gene3D G3DSA:3.30.70.900 5 98 2.3E-29 T 26-04-2016 PAM18_RS14570 5a0b84d5ba2bae1693ba14e9059bb83f 114 SUPERFAMILY SSF54909 1 95 3.94E-29 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS14570 5a0b84d5ba2bae1693ba14e9059bb83f 114 PANTHER PTHR33336 1 105 5.4E-38 T 26-04-2016 PAM18_RS14570 5a0b84d5ba2bae1693ba14e9059bb83f 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 4.4E-20 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS09795 1cdd8aea367847bd57064e1a62c7a713 634 PANTHER PTHR11705:SF82 31 404 3.5E-44 T 26-04-2016 PAM18_RS09795 1cdd8aea367847bd57064e1a62c7a713 634 SUPERFAMILY SSF53187 76 348 3.64E-39 T 26-04-2016 PAM18_RS09795 1cdd8aea367847bd57064e1a62c7a713 634 Pfam PF00246 Zinc carboxypeptidase 86 272 1.8E-17 T 26-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PAM18_RS09795 1cdd8aea367847bd57064e1a62c7a713 634 Gene3D G3DSA:3.40.630.10 69 365 7.5E-41 T 26-04-2016 PAM18_RS09795 1cdd8aea367847bd57064e1a62c7a713 634 PANTHER PTHR11705 31 404 3.5E-44 T 26-04-2016 PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 1.3E-13 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 1.3E-13 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 1.3E-13 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 1.3E-13 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PANTHER PTHR30012 1 395 2.1E-118 T 26-04-2016 PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 Pfam PF00482 Type II secretion system (T2SS), protein F 63 185 1.4E-27 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 Pfam PF00482 Type II secretion system (T2SS), protein F 266 385 7.1E-21 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS11805 a566160b5433f0adc3781aec05f80028 395 PANTHER PTHR30012:SF0 1 395 2.1E-118 T 26-04-2016 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 5.3E-16 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF46689 9 76 4.14E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 Gene3D G3DSA:1.10.357.10 12 205 2.2E-31 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF13305 WHG domain 87 173 1.4E-7 T 26-04-2016 IPR025996 WHG domain PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 PANTHER PTHR30055 2 197 9.6E-73 T 26-04-2016 PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF48498 87 195 1.14E-9 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS10290 0e71736700f26cd0b7393ffc6f605ef9 212 PANTHER PTHR30055:SF40 2 197 9.6E-73 T 26-04-2016 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 SUPERFAMILY SSF51735 7 188 2.44E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 SUPERFAMILY SSF48179 312 404 2.21E-21 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 187 7.7E-60 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Gene3D G3DSA:1.10.1040.10 192 281 5.6E-18 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 PANTHER PTHR23309 8 406 2.0E-182 T 26-04-2016 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 PANTHER PTHR23309:SF9 8 406 2.0E-182 T 26-04-2016 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Gene3D G3DSA:3.40.50.720 3 191 1.6E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Gene3D G3DSA:1.10.1040.10 323 402 3.6E-14 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 SUPERFAMILY SSF48179 190 330 2.98E-24 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 281 5.9E-23 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS27130 9bd34c52283ccae685481c2ba8bb626b 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 317 401 6.8E-7 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 Pfam PF01425 Amidase 459 544 4.3E-6 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 Pfam PF01425 Amidase 25 291 5.4E-45 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 Gene3D G3DSA:3.90.1300.10 2 566 1.5E-120 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 SUPERFAMILY SSF75304 1 561 2.35E-89 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 PANTHER PTHR11895:SF8 317 561 3.0E-208 T 26-04-2016 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 PANTHER PTHR11895:SF8 1 296 3.0E-208 T 26-04-2016 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 PANTHER PTHR11895 317 561 3.0E-208 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS03955 6440f6fa77379d524e4d0cf81d8c6f85 569 PANTHER PTHR11895 1 296 3.0E-208 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SUPERFAMILY SSF50494 95 279 2.58E-70 T 26-04-2016 IPR009003 Peptidase S1, PA clan PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SUPERFAMILY SSF50494 6 48 2.58E-70 T 26-04-2016 IPR009003 Peptidase S1, PA clan PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Pfam PF13180 PDZ domain 385 466 5.3E-10 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Pfam PF13180 PDZ domain 271 360 3.4E-18 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SMART SM00228 384 463 3.7E-11 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SMART SM00228 270 352 3.9E-15 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SUPERFAMILY SSF50156 252 358 4.05E-23 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PANTHER PTHR22939:SF98 20 50 3.1E-166 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PANTHER PTHR22939:SF98 79 374 3.1E-166 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Pfam PF13365 Trypsin-like peptidase domain 98 231 3.0E-35 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 SUPERFAMILY SSF50156 385 472 4.86E-15 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 310 322 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 5.9E-53 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PANTHER PTHR22939 20 50 3.1E-166 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 PANTHER PTHR22939 79 374 3.1E-166 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 470 2.7E-162 T 26-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Gene3D G3DSA:2.40.10.10 21 48 1.4E-39 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Gene3D G3DSA:2.40.10.10 85 162 1.4E-39 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Gene3D G3DSA:2.40.10.10 163 271 3.3E-46 T 26-04-2016 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Gene3D G3DSA:2.30.42.10 385 474 5.2E-19 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS21810 a3a90127e94a09ee89efb8ea18d07b85 474 Gene3D G3DSA:2.30.42.10 272 368 1.0E-29 T 26-04-2016 IPR001478 PDZ domain GO:0005515 PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 Pfam PF00571 CBS domain 245 297 9.4E-11 T 26-04-2016 IPR000644 CBS domain PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 Pfam PF00571 CBS domain 318 370 1.9E-12 T 26-04-2016 IPR000644 CBS domain PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 SMART SM00116 323 371 2.0E-11 T 26-04-2016 IPR000644 CBS domain PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 SMART SM00116 251 299 2.0E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 PANTHER PTHR11911 209 384 3.3E-58 T 26-04-2016 PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 SUPERFAMILY SSF54631 232 374 4.11E-34 T 26-04-2016 PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 Gene3D G3DSA:3.20.20.70 195 372 7.2E-32 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 Pfam PF04982 HPP family 58 176 5.9E-30 T 26-04-2016 IPR007065 HPP PAM18_RS16335 f06a4639468f6f47225f4053d4fc70ba 385 PANTHER PTHR11911:SF90 209 384 3.3E-58 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 Gene3D G3DSA:3.40.190.10 145 312 1.2E-69 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 Pfam PF13416 Bacterial extracellular solute-binding protein 40 328 1.2E-31 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PANTHER PTHR30222:SF11 7 363 1.1E-181 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PANTHER PTHR30222 7 363 1.1E-181 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PIRSF PIRSF019574 2 363 2.0E-132 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 SUPERFAMILY SSF53850 24 362 2.34E-99 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 Gene3D G3DSA:3.40.190.10 25 144 1.2E-21 T 26-04-2016 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS19030 adf8a290f3899efb5fcea06495765853 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 4.5E-64 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 PAM18_RS27160 4b13a0a4ccae696afed8765fc32e6156 267 Gene3D G3DSA:1.20.144.10 42 226 5.8E-6 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS27160 4b13a0a4ccae696afed8765fc32e6156 267 Pfam PF01569 PAP2 superfamily 146 226 1.3E-12 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS27160 4b13a0a4ccae696afed8765fc32e6156 267 SUPERFAMILY SSF48317 16 228 4.84E-11 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 4.3E-32 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 26-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 PANTHER PTHR10772 1 97 1.4E-42 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.57 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.9E-31 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.9E-31 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.9E-31 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.9E-31 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 SMART SM00883 2 95 9.5E-56 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 SUPERFAMILY SSF50129 1 96 5.56E-34 T 26-04-2016 IPR011032 GroES-like PAM18_RS22880 5346c5c2f4ce088d6e5028068f1e4220 97 Gene3D G3DSA:2.30.33.40 1 96 9.7E-36 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 SUPERFAMILY SSF56300 235 305 8.98E-34 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 SUPERFAMILY SSF56300 5 174 8.98E-34 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 PANTHER PTHR11668:SF281 9 86 3.3E-25 T 26-04-2016 PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 Gene3D G3DSA:3.60.21.10 210 316 6.1E-43 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 Gene3D G3DSA:3.60.21.10 3 163 6.1E-43 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 PANTHER PTHR11668 9 86 3.3E-25 T 26-04-2016 PAM18_RS09645 55b72af5af4bc59a8be6aab5a3a8eca1 326 Pfam PF00149 Calcineurin-like phosphoesterase 11 150 5.3E-10 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS07450 0b5cdcc02b10ebf1646773fb08375834 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.721 T 26-04-2016 IPR005583 Peroxide stress protein YaaA PAM18_RS07450 0b5cdcc02b10ebf1646773fb08375834 259 Pfam PF03883 Protein of unknown function (DUF328) 1 243 4.3E-90 T 26-04-2016 IPR005583 Peroxide stress protein YaaA PAM18_RS07450 0b5cdcc02b10ebf1646773fb08375834 259 PANTHER PTHR30283:SF3 2 256 1.6E-122 T 26-04-2016 PAM18_RS07450 0b5cdcc02b10ebf1646773fb08375834 259 PANTHER PTHR30283 2 256 1.6E-122 T 26-04-2016 PAM18_RS22145 59c298ca0a2eb17ec0c98a27a75a3adf 221 Pfam PF12833 Helix-turn-helix domain 138 208 9.8E-12 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS22145 59c298ca0a2eb17ec0c98a27a75a3adf 221 SMART SM00342 132 214 3.0E-9 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS22145 59c298ca0a2eb17ec0c98a27a75a3adf 221 Gene3D G3DSA:1.10.10.60 112 169 1.2E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21940 16acf55a51d4dda6681518aad6ffbeab 213 PANTHER PTHR15020 1 213 6.5E-85 T 26-04-2016 PAM18_RS21940 16acf55a51d4dda6681518aad6ffbeab 213 SUPERFAMILY SSF51735 1 211 2.96E-39 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS21940 16acf55a51d4dda6681518aad6ffbeab 213 Pfam PF13460 NAD(P)H-binding 7 198 2.4E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS21940 16acf55a51d4dda6681518aad6ffbeab 213 PANTHER PTHR15020:SF29 1 213 6.5E-85 T 26-04-2016 PAM18_RS21940 16acf55a51d4dda6681518aad6ffbeab 213 Gene3D G3DSA:3.40.50.720 1 213 6.3E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 PANTHER PTHR24220 11 250 1.1E-149 T 26-04-2016 PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 Gene3D G3DSA:3.40.50.300 3 237 1.4E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 SMART SM00382 34 223 3.5E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 Pfam PF00005 ABC transporter 27 175 1.3E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 PANTHER PTHR24220:SF483 11 250 1.1E-149 T 26-04-2016 PAM18_RS09020 e7a835bd23cfe37393c91f830291a67e 264 SUPERFAMILY SSF52540 9 236 2.44E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00645 38068d7dd0150dfaf06d4f540a1708cc 166 Gene3D G3DSA:2.60.40.10 47 146 6.4E-11 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS00645 38068d7dd0150dfaf06d4f540a1708cc 166 SMART SM00769 34 154 5.7E-48 T 26-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 PAM18_RS00645 38068d7dd0150dfaf06d4f540a1708cc 166 Pfam PF03168 Late embryogenesis abundant protein 54 145 6.6E-22 T 26-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 PAM18_RS00645 38068d7dd0150dfaf06d4f540a1708cc 166 SUPERFAMILY SSF117070 12 153 6.41E-31 T 26-04-2016 PAM18_RS04650 60721cfc527b5a3edc9219e57027090c 153 Pfam PF00583 Acetyltransferase (GNAT) family 55 136 2.1E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS04650 60721cfc527b5a3edc9219e57027090c 153 SUPERFAMILY SSF55729 1 146 1.51E-37 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS04650 60721cfc527b5a3edc9219e57027090c 153 PANTHER PTHR23091 1 152 7.4E-20 T 26-04-2016 PAM18_RS04650 60721cfc527b5a3edc9219e57027090c 153 Gene3D G3DSA:3.40.630.30 1 145 5.5E-29 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 PANTHER PTHR30085:SF1 9 238 3.6E-91 T 26-04-2016 PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 PANTHER PTHR30085 9 238 3.6E-91 T 26-04-2016 PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 SUPERFAMILY SSF161098 13 217 2.49E-41 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 Gene3D G3DSA:1.10.3720.10 12 229 1.1E-45 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 229 1.5E-13 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14545 2072046db6c1de46aceab277d4ac7ff0 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 80 9.9E-20 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 1.6E-113 T 26-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF01380 SIS domain 41 172 1.9E-32 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 PANTHER PTHR38418:SF1 45 207 1.3E-38 T 26-04-2016 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 Gene3D G3DSA:3.40.50.10490 13 191 2.8E-51 T 26-04-2016 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF00571 CBS domain 277 321 6.3E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF00571 CBS domain 217 258 1.0E-4 T 26-04-2016 IPR000644 CBS domain PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 Gene3D G3DSA:3.10.580.10 192 321 2.3E-38 T 26-04-2016 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 SUPERFAMILY SSF53697 9 322 1.65E-69 T 26-04-2016 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 PANTHER PTHR38418 45 207 1.3E-38 T 26-04-2016 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 PIRSF PIRSF004692 1 324 5.4E-133 T 26-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 SMART SM00116 210 258 3.0 T 26-04-2016 IPR000644 CBS domain PAM18_RS23235 590f1a6178501813f74dc44b5861d6f0 324 SMART SM00116 275 323 0.02 T 26-04-2016 IPR000644 CBS domain PAM18_RS15825 bcdf866463d980a5d26ede08572b770f 191 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 1.0E-55 T 26-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PAM18_RS15825 bcdf866463d980a5d26ede08572b770f 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 181 1.3E-30 T 26-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PAM18_RS15825 bcdf866463d980a5d26ede08572b770f 191 PANTHER PTHR36122:SF1 1 182 8.2E-84 T 26-04-2016 PAM18_RS15825 bcdf866463d980a5d26ede08572b770f 191 PANTHER PTHR36122 1 182 8.2E-84 T 26-04-2016 PAM18_RS04240 f0f6edd26eb43926d14bec42389eeee1 155 SUPERFAMILY SSF47473 82 140 8.86E-9 T 26-04-2016 IPR011992 EF-hand domain pair PAM18_RS04240 f0f6edd26eb43926d14bec42389eeee1 155 Pfam PF13202 EF hand 84 103 6.6E-4 T 26-04-2016 IPR002048 EF-hand domain GO:0005509 PAM18_RS04240 f0f6edd26eb43926d14bec42389eeee1 155 Pfam PF13202 EF hand 111 128 0.0063 T 26-04-2016 IPR002048 EF-hand domain GO:0005509 PAM18_RS04240 f0f6edd26eb43926d14bec42389eeee1 155 Gene3D G3DSA:1.10.238.10 83 133 6.8E-7 T 26-04-2016 IPR011992 EF-hand domain pair PAM18_RS04240 f0f6edd26eb43926d14bec42389eeee1 155 ProSitePatterns PS00018 EF-hand calcium-binding domain. 88 100 - T 26-04-2016 IPR018247 EF-Hand 1, calcium-binding site PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 26-04-2016 IPR018030 Fimbrial membrane usher, conserved site PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 PANTHER PTHR30451 1 838 0.0 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 Pfam PF00577 Outer membrane usher protein 199 749 6.2E-165 T 26-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 SUPERFAMILY SSF141729 58 176 1.44E-28 T 26-04-2016 PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 Pfam PF13954 PapC N-terminal domain 36 184 1.5E-40 T 26-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 Pfam PF13953 PapC C-terminal domain 759 820 5.1E-15 T 26-04-2016 IPR025949 PapC-like, C-terminal domain PAM18_RS20695 19e6fdc92cd54a19b2573742d08e2765 839 PANTHER PTHR30451:SF2 1 838 0.0 T 26-04-2016 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 PANTHER PTHR11019:SF45 23 286 1.8E-86 T 26-04-2016 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 PANTHER PTHR11019 23 286 1.8E-86 T 26-04-2016 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 8.2E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 8.2E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 Pfam PF02311 AraC-like ligand binding domain 32 161 3.3E-8 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 SUPERFAMILY SSF46689 241 287 8.8E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 Gene3D G3DSA:1.10.10.60 242 287 1.5E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 Gene3D G3DSA:1.10.10.60 181 230 2.0E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 Gene3D G3DSA:2.60.120.10 40 89 4.7E-8 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 SUPERFAMILY SSF51182 40 153 6.23E-12 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 SMART SM00342 202 285 3.7E-24 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS01230 c91865d4dd4d313b4a05700fad17fc30 288 Pfam PF12833 Helix-turn-helix domain 208 286 8.1E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 Pfam PF03550 Outer membrane lipoprotein LolB 48 198 5.5E-49 T 26-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 PANTHER PTHR30634:SF11 1 205 3.8E-55 T 26-04-2016 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 Gene3D G3DSA:2.50.20.10 11 200 1.3E-62 T 26-04-2016 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 SUPERFAMILY SSF89392 17 200 1.1E-50 T 26-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 PANTHER PTHR30634 1 205 3.8E-55 T 26-04-2016 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 200 27.01 T 26-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PAM18_RS24345 ad32348b69bfa08a6b413f0177c9fbb2 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 2 200 2.3E-90 T 26-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 PAM18_RS01600 9d7e7adc960f4d11daca7cbc3b553344 310 SUPERFAMILY SSF50956 20 299 3.27E-40 T 26-04-2016 PAM18_RS01600 9d7e7adc960f4d11daca7cbc3b553344 310 Pfam PF06977 SdiA-regulated 51 297 8.1E-92 T 26-04-2016 IPR009722 SdiA-regulated PAM18_RS01600 9d7e7adc960f4d11daca7cbc3b553344 310 Gene3D G3DSA:2.120.10.30 74 304 1.4E-16 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 23 37 - T 26-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 SUPERFAMILY SSF53790 14 263 2.09E-82 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 PANTHER PTHR21091:SF16 13 248 5.8E-80 T 26-04-2016 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 98 131 - T 26-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 PANTHER PTHR21091 13 248 5.8E-80 T 26-04-2016 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 18 253 2.5E-94 T 26-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 Gene3D G3DSA:3.40.1010.10 18 133 1.2E-45 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 230 6.5E-50 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 PAM18_RS02580 0c1575a67ec115c51f73d1f34cc01e56 279 Gene3D G3DSA:3.30.950.10 134 257 1.7E-47 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 PAM18_RS01295 e567038507cd11dd2249f94ed806e062 718 Pfam PF11678 Protein of unknown function (DUF3274) 386 687 9.3E-101 T 26-04-2016 IPR021692 Protein of unknown function DUF3274 PAM18_RS01295 e567038507cd11dd2249f94ed806e062 718 Gene3D G3DSA:3.40.50.1820 205 276 6.5E-8 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01295 e567038507cd11dd2249f94ed806e062 718 Gene3D G3DSA:3.40.50.1820 346 378 6.5E-8 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01295 e567038507cd11dd2249f94ed806e062 718 SUPERFAMILY SSF53474 181 278 4.99E-12 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PIRSF PIRSF000723 1 302 9.4E-112 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.6E-70 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 Pfam PF00696 Amino acid kinase family 1 283 1.2E-25 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 SUPERFAMILY SSF53633 1 300 3.8E-78 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 Gene3D G3DSA:3.40.1160.10 1 300 8.3E-98 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PANTHER PTHR30409:SF1 1 303 6.0E-155 T 26-04-2016 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 TIGRFAM TIGR00746 arcC: carbamate kinase 1 301 9.9E-139 T 26-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PAM18_RS27050 b21b6b6ed6d833f3872ad64b7df1c877 310 PANTHER PTHR30409 1 303 6.0E-155 T 26-04-2016 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 SUPERFAMILY SSF161098 63 248 2.35E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 PANTHER PTHR30151 244 521 3.3E-113 T 26-04-2016 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 347 513 1.5E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 256 1.7E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 PANTHER PTHR30151:SF8 244 521 3.3E-113 T 26-04-2016 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 SUPERFAMILY SSF161098 323 509 5.36E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 Gene3D G3DSA:1.10.3720.10 64 256 2.6E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS00935 ddca274594cb4f3f1c4c3b11b355b274 523 Gene3D G3DSA:1.10.3720.10 325 519 6.9E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 Pfam PF00005 ABC transporter 505 648 4.4E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 Gene3D G3DSA:1.20.1560.10 157 465 1.5E-48 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 Gene3D G3DSA:3.90.70.10 18 141 1.4E-31 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 20 709 2.1E-271 T 26-04-2016 IPR017750 ATPase, type I secretion system PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 Pfam PF00664 ABC transporter transmembrane region 174 432 3.6E-18 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 SMART SM00382 509 694 2.0E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 SUPERFAMILY SSF90123 157 467 3.01E-50 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 PANTHER PTHR24221:SF260 139 705 0.0 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 PANTHER PTHR24221:SF260 1 56 0.0 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 PANTHER PTHR24221 139 705 0.0 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 PANTHER PTHR24221 1 56 0.0 T 26-04-2016 PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 SUPERFAMILY SSF52540 476 709 1.26E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16220 6a29b0c1323591004dece143c08bd677 723 Gene3D G3DSA:3.40.50.300 486 709 3.2E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02615 762f51db0907f9d276520ccde4611f38 119 SUPERFAMILY SSF46626 14 110 5.7E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02615 762f51db0907f9d276520ccde4611f38 119 Gene3D G3DSA:1.10.760.10 30 110 3.1E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02615 762f51db0907f9d276520ccde4611f38 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 42 109 8.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27820 7523a4b563889f836689d98481706bae 316 Pfam PF13557 Putative MetA-pathway of phenol degradation 76 310 6.4E-58 T 26-04-2016 IPR025737 MetA-pathway of phenol degradation, putative PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 Pfam PF07690 Major Facilitator Superfamily 20 229 1.3E-8 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 PANTHER PTHR23542 2 401 2.1E-153 T 26-04-2016 PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 Gene3D G3DSA:1.20.1250.20 18 188 7.4E-9 T 26-04-2016 PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 Gene3D G3DSA:1.20.1250.20 212 387 5.1E-13 T 26-04-2016 PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 SUPERFAMILY SSF103473 17 389 3.27E-29 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS14240 1fee5e4b074eba3da9c4be8fd0b0774a 401 PANTHER PTHR23542:SF1 2 401 2.1E-153 T 26-04-2016 PAM18_RS10110 00e405631ec38beed33f9db88fcb8154 75 PANTHER PTHR40691 1 75 7.8E-31 T 26-04-2016 PAM18_RS10110 00e405631ec38beed33f9db88fcb8154 75 Pfam PF04400 Protein of unknown function (DUF539) 21 59 4.7E-14 T 26-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM PAM18_RS19525 c69ad7dbc5d9d86953eebddd8a3092ab 319 PANTHER PTHR10696 61 308 6.0E-95 T 26-04-2016 PAM18_RS19525 c69ad7dbc5d9d86953eebddd8a3092ab 319 PANTHER PTHR10696:SF27 61 308 6.0E-95 T 26-04-2016 PAM18_RS19525 c69ad7dbc5d9d86953eebddd8a3092ab 319 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 66 281 2.4E-16 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS19525 c69ad7dbc5d9d86953eebddd8a3092ab 319 Gene3D G3DSA:3.60.130.10 26 293 1.1E-48 T 26-04-2016 PAM18_RS19525 c69ad7dbc5d9d86953eebddd8a3092ab 319 SUPERFAMILY SSF51197 23 289 3.62E-38 T 26-04-2016 PAM18_RS17995 f56de7c99a0520cb6f438067a40a8eb0 179 Pfam PF03691 Uncharacterised protein family (UPF0167) 5 178 5.4E-60 T 26-04-2016 IPR005363 Uncharacterised protein family UPF0167 PAM18_RS12625 982a69a0ef0841a523592d3273bf01f9 74 Gene3D G3DSA:3.30.1580.10 4 67 1.2E-5 T 26-04-2016 IPR004174 Head-to-tail joining protein W, GpW GO:0019058 PAM18_RS16090 001430fa51d1dbdf0599f40257229adc 207 Gene3D G3DSA:3.40.50.850 3 70 4.9E-12 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS16090 001430fa51d1dbdf0599f40257229adc 207 PANTHER PTHR11080:SF4 7 65 5.3E-19 T 26-04-2016 PAM18_RS16090 001430fa51d1dbdf0599f40257229adc 207 SUPERFAMILY SSF52499 1 72 5.23E-12 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS16090 001430fa51d1dbdf0599f40257229adc 207 PANTHER PTHR11080 7 65 5.3E-19 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 Gene3D G3DSA:2.40.50.100 67 98 5.9E-15 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 Gene3D G3DSA:2.40.50.100 246 280 5.9E-15 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 Pfam PF13533 Biotin-lipoyl like 67 109 3.1E-6 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PANTHER PTHR32347 23 391 1.1E-177 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 294 318 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 282 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 341 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 395 2.6E-39 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 Pfam PF13437 HlyD family secretion protein 249 356 4.6E-17 T 26-04-2016 PAM18_RS16215 6c7f2eedf40899c2219d1be9d50cc0ed 395 PANTHER PTHR32347:SF13 23 391 1.1E-177 T 26-04-2016 PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 PIRSF PIRSF002889 1 135 2.2E-46 T 26-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 26-04-2016 IPR019776 Flagellar basal body rod protein, conserved site PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 133 3.8E-46 T 26-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 Pfam PF00460 Flagella basal body rod protein 11 39 8.1E-9 T 26-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 PANTHER PTHR30435:SF12 2 135 7.1E-51 T 26-04-2016 PAM18_RS20260 abad5f29bd4483fbd55dbf5a6a5600e4 135 PANTHER PTHR30435 2 135 7.1E-51 T 26-04-2016 PAM18_RS24080 624b393669a10f8dd33448a883c423be 191 PANTHER PTHR19136 3 190 2.2E-33 T 26-04-2016 PAM18_RS24080 624b393669a10f8dd33448a883c423be 191 Pfam PF12804 MobA-like NTP transferase domain 9 167 1.1E-36 T 26-04-2016 IPR025877 MobA-like NTP transferase PAM18_RS24080 624b393669a10f8dd33448a883c423be 191 Gene3D G3DSA:3.90.550.10 6 190 7.8E-33 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS24080 624b393669a10f8dd33448a883c423be 191 SUPERFAMILY SSF53448 8 190 4.51E-28 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS24080 624b393669a10f8dd33448a883c423be 191 PANTHER PTHR19136:SF78 3 190 2.2E-33 T 26-04-2016 PAM18_RS01240 42659172796250759bf1eb352d931854 144 PANTHER PTHR11911 14 144 3.3E-37 T 26-04-2016 PAM18_RS01240 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 14 61 9.9E-11 T 26-04-2016 IPR000644 CBS domain PAM18_RS01240 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 74 125 1.3E-11 T 26-04-2016 IPR000644 CBS domain PAM18_RS01240 42659172796250759bf1eb352d931854 144 Gene3D G3DSA:3.10.580.10 13 126 2.4E-32 T 26-04-2016 PAM18_RS01240 42659172796250759bf1eb352d931854 144 SUPERFAMILY SSF54631 10 142 5.56E-33 T 26-04-2016 PAM18_RS01240 42659172796250759bf1eb352d931854 144 SMART SM00116 15 62 4.5E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS01240 42659172796250759bf1eb352d931854 144 SMART SM00116 80 127 2.2E-7 T 26-04-2016 IPR000644 CBS domain PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 Gene3D G3DSA:3.40.720.10 316 612 2.6E-37 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 PIRSF PIRSF005091 16 695 3.7E-133 T 26-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 Pfam PF00884 Sulfatase 315 594 2.0E-45 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 SUPERFAMILY SSF53649 315 680 6.4E-64 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 PANTHER PTHR10342:SF236 277 657 2.7E-93 T 26-04-2016 PAM18_RS17210 c4d6cd529deeafc864dab7402a80186b 700 PANTHER PTHR10342 277 657 2.7E-93 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 Gene3D G3DSA:1.20.1250.20 26 236 2.8E-14 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 Gene3D G3DSA:1.20.1250.20 254 461 1.0E-11 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 TIGRFAM TIGR00886 2A0108: nitrite transporter 38 420 4.1E-119 T 26-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 SUPERFAMILY SSF103473 21 460 1.03E-36 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 PANTHER PTHR23515 402 462 1.2E-236 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 PANTHER PTHR23515 1 379 1.2E-236 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 PANTHER PTHR23515:SF6 402 462 1.2E-236 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 PANTHER PTHR23515:SF6 1 379 1.2E-236 T 26-04-2016 PAM18_RS05410 6b7724ab6e39e973b083f9417e9fe965 468 Pfam PF07690 Major Facilitator Superfamily 46 378 1.0E-12 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 3.4E-208 T 26-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 1.6E-213 T 26-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 SUPERFAMILY SSF69349 442 608 2.43E-48 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 PANTHER PTHR32305:SF7 1 674 3.3E-276 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 529 552 2.5E-5 T 26-04-2016 IPR010609 Gp5, C-terminal PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 633 656 5.5E-5 T 26-04-2016 IPR010609 Gp5, C-terminal PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 SUPERFAMILY SSF69255 365 452 3.92E-35 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 PANTHER PTHR32305 1 674 3.3E-276 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 Gene3D G3DSA:2.40.50.230 370 452 1.3E-42 T 26-04-2016 IPR006531 Gp5 N-terminal PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 SUPERFAMILY SSF69279 11 184 7.65E-64 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 Gene3D G3DSA:3.55.50.10 98 190 1.0E-38 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 SUPERFAMILY SSF69349 580 723 8.63E-24 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 SUPERFAMILY SSF69279 189 363 5.1E-37 T 26-04-2016 PAM18_RS00485 3abf061a83d55fe88ce2fdfa9189ac1f 741 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 6.9E-106 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 4.6E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 SUPERFAMILY SSF46785 17 98 8.07E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 Gene3D G3DSA:3.40.190.10 109 183 2.0E-18 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 Gene3D G3DSA:1.10.10.10 15 97 1.6E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 PANTHER PTHR30537:SF16 13 308 1.2E-134 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 SUPERFAMILY SSF53850 109 307 3.08E-25 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 Pfam PF03466 LysR substrate binding domain 109 306 1.2E-19 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 PANTHER PTHR30537 13 308 1.2E-134 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 Gene3D G3DSA:3.40.190.10 184 274 1.5E-26 T 26-04-2016 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 4.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 4.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS10430 2bb2a84c537ad7135e49d16a22a91c68 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 4.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 Pfam PF00795 Carbon-nitrogen hydrolase 15 267 6.5E-53 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 Gene3D G3DSA:3.60.110.10 7 274 1.7E-53 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 PANTHER PTHR23088 1 283 3.3E-171 T 26-04-2016 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 Hamap MF_01242 Aliphatic amidase [amiE]. 1 340 87.724 T 26-04-2016 IPR023719 Aliphatic amidase GO:0004040 KEGG: 00330+3.5.1.4|KEGG: 00360+3.5.1.4|KEGG: 00380+3.5.1.4|KEGG: 00627+3.5.1.4|KEGG: 00643+3.5.1.4|MetaCyc: PWY-3161|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 SUPERFAMILY SSF56317 10 275 2.75E-56 T 26-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 PAM18_RS08220 f6f95af1dab740b4d2e86fc4715332ca 346 PANTHER PTHR23088:SF32 1 283 3.3E-171 T 26-04-2016 PAM18_RS16175 98fc0652fdb77c1bc11f91bdddf059df 177 Pfam PF13673 Acetyltransferase (GNAT) domain 60 151 2.3E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS16175 98fc0652fdb77c1bc11f91bdddf059df 177 PANTHER PTHR23091 1 173 4.3E-25 T 26-04-2016 PAM18_RS16175 98fc0652fdb77c1bc11f91bdddf059df 177 Gene3D G3DSA:3.40.630.30 3 173 1.2E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS16175 98fc0652fdb77c1bc11f91bdddf059df 177 SUPERFAMILY SSF55729 5 173 3.38E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS16175 98fc0652fdb77c1bc11f91bdddf059df 177 PANTHER PTHR23091:SF71 1 173 4.3E-25 T 26-04-2016 PAM18_RS26115 106d4d26ac544b085948b78784428868 391 Pfam PF01266 FAD dependent oxidoreductase 8 314 5.5E-20 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS26115 106d4d26ac544b085948b78784428868 391 SUPERFAMILY SSF51905 7 222 5.83E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26115 106d4d26ac544b085948b78784428868 391 SUPERFAMILY SSF51905 252 289 5.83E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26115 106d4d26ac544b085948b78784428868 391 Gene3D G3DSA:3.50.50.60 5 229 3.0E-20 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 3.3E-13 T 26-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 PANTHER PTHR24095 1 627 0.0 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 PANTHER PTHR24095:SF160 1 627 0.0 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Gene3D G3DSA:2.30.38.10 416 494 6.5E-11 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Gene3D G3DSA:3.30.300.30 496 626 2.4E-25 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Gene3D G3DSA:3.40.50.980 241 399 2.8E-28 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 SUPERFAMILY SSF56801 3 623 3.66E-156 T 26-04-2016 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 1.2E-24 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Pfam PF00501 AMP-binding enzyme 65 500 5.2E-83 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS07300 6fe954abc568de89257e313c44382013 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS07300 6fe954abc568de89257e313c44382013 628 Gene3D G3DSA:3.40.50.980 59 240 7.7E-35 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 SUPERFAMILY SSF53850 2 250 2.8E-64 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 Gene3D G3DSA:3.40.190.10 108 197 1.5E-23 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 PANTHER PTHR18966:SF189 18 251 8.4E-44 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 248 3.1E-60 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 SMART SM00062 31 250 4.6E-64 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 PANTHER PTHR18966 18 251 8.4E-44 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 Gene3D G3DSA:3.40.190.10 28 107 5.1E-38 T 26-04-2016 PAM18_RS01575 23619acac30924bc9894e12129a2fdb8 256 Gene3D G3DSA:3.40.190.10 209 251 5.1E-38 T 26-04-2016 PAM18_RS10305 4003a7590c21dcd95a1928cefb104497 189 PIRSF PIRSF029557 1 189 8.2E-90 T 26-04-2016 IPR010707 Protein of unknown function DUF1285 PAM18_RS10305 4003a7590c21dcd95a1928cefb104497 189 Gene3D G3DSA:2.20.70.10 172 187 5.8E-5 T 26-04-2016 PAM18_RS10305 4003a7590c21dcd95a1928cefb104497 189 Gene3D G3DSA:3.10.540.10 7 88 6.4E-38 T 26-04-2016 PAM18_RS10305 4003a7590c21dcd95a1928cefb104497 189 Pfam PF06938 Protein of unknown function (DUF1285) 38 182 2.3E-60 T 26-04-2016 IPR010707 Protein of unknown function DUF1285 PAM18_RS10305 4003a7590c21dcd95a1928cefb104497 189 Gene3D G3DSA:2.30.270.10 89 158 3.6E-32 T 26-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Gene3D G3DSA:1.10.645.10 436 576 7.6E-14 T 26-04-2016 IPR029014 NiFe hydrogenase-like PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Gene3D G3DSA:1.10.645.10 209 434 6.7E-34 T 26-04-2016 IPR029014 NiFe hydrogenase-like PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 19 179 25.66 T 26-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 SUPERFAMILY SSF143243 18 223 7.59E-60 T 26-04-2016 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 246 257 - T 26-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 SUPERFAMILY SSF56762 219 593 5.89E-123 T 26-04-2016 IPR029014 NiFe hydrogenase-like PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 323 593 1.1E-106 T 26-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 PANTHER PTHR11993 141 588 2.3E-303 T 26-04-2016 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 10 593 71.843 T 26-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 209 593 3.9E-172 T 26-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 43 170 3.1E-42 T 26-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 99 154 1.0E-26 T 26-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 PANTHER PTHR11993:SF28 141 588 2.3E-303 T 26-04-2016 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 172 6.0E-41 T 26-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PAM18_RS12000 6e1fd1122cca2db7d7dac416da8f1d96 593 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 205 593 42.347 T 26-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 PAM18_RS18660 ec8cdbc833e756d36699ab3e1d6bdf7c 455 PIRSF PIRSF006060 1 453 1.1E-55 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS18660 ec8cdbc833e756d36699ab3e1d6bdf7c 455 PANTHER PTHR11785:SF261 7 447 1.1E-95 T 26-04-2016 PAM18_RS18660 ec8cdbc833e756d36699ab3e1d6bdf7c 455 PANTHER PTHR11785 7 447 1.1E-95 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS18660 ec8cdbc833e756d36699ab3e1d6bdf7c 455 Pfam PF13520 Amino acid permease 15 423 4.8E-36 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS25150 09981ae0c1b4a1aee8878a0f7143f64d 205 SUPERFAMILY SSF53335 3 189 3.07E-26 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25150 09981ae0c1b4a1aee8878a0f7143f64d 205 Pfam PF13649 Methyltransferase domain 44 140 4.8E-12 T 26-04-2016 PAM18_RS25150 09981ae0c1b4a1aee8878a0f7143f64d 205 Gene3D G3DSA:3.40.50.150 4 190 1.6E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 Pfam PF01381 Helix-turn-helix 5 57 2.0E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 Gene3D G3DSA:1.10.260.40 1 62 6.6E-24 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 PANTHER PTHR10245 1 61 1.6E-23 T 26-04-2016 PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 SMART SM00530 4 59 2.8E-18 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 PANTHER PTHR10245:SF26 1 61 1.6E-23 T 26-04-2016 PAM18_RS04395 49c42ed5574ab0ebf0f2e360c5ff53f0 68 SUPERFAMILY SSF47413 3 64 2.12E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 SUPERFAMILY SSF53850 86 374 2.01E-33 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 Gene3D G3DSA:3.40.190.10 192 321 1.7E-13 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 PANTHER PTHR30006:SF2 61 396 7.7E-132 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 PANTHER PTHR30006 61 396 7.7E-132 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 Gene3D G3DSA:3.40.190.10 322 364 2.6E-22 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 Gene3D G3DSA:3.40.190.10 35 188 2.6E-22 T 26-04-2016 PAM18_RS13700 37a9c6d92740953285416c01387bf28f 424 Pfam PF13343 Bacterial extracellular solute-binding protein 154 336 1.9E-11 T 26-04-2016 PAM18_RS28460 c5f88857c998251441d7a64baa2aa033 67 Pfam PF06568 Domain of unknown function (DUF1127) 22 57 7.6E-10 T 26-04-2016 IPR009506 Protein of unknown function DUF1127 PAM18_RS12285 6fd46fedc61545a53da5dd6bc3087b00 264 SMART SM00824 Thioesterase 26 251 0.0013 T 26-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 PAM18_RS12285 6fd46fedc61545a53da5dd6bc3087b00 264 Pfam PF00975 Thioesterase domain 24 250 2.5E-41 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS12285 6fd46fedc61545a53da5dd6bc3087b00 264 PANTHER PTHR11487 6 261 1.2E-68 T 26-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 PAM18_RS12285 6fd46fedc61545a53da5dd6bc3087b00 264 Gene3D G3DSA:3.40.50.1820 18 247 6.2E-32 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS12285 6fd46fedc61545a53da5dd6bc3087b00 264 SUPERFAMILY SSF53474 12 247 2.13E-47 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS25925 a8087da21a478245d5ca5eb478b1c1e9 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 2.6E-9 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS25925 a8087da21a478245d5ca5eb478b1c1e9 283 PANTHER PTHR30433 1 283 3.2E-161 T 26-04-2016 PAM18_RS25925 a8087da21a478245d5ca5eb478b1c1e9 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.1E-113 T 26-04-2016 IPR022522 Flagellar motor stator, MotA PAM18_RS25925 a8087da21a478245d5ca5eb478b1c1e9 283 PANTHER PTHR30433:SF4 1 283 3.2E-161 T 26-04-2016 IPR022522 Flagellar motor stator, MotA PAM18_RS25925 a8087da21a478245d5ca5eb478b1c1e9 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 26-04-2016 IPR000540 Flagellar motor protein MotA, conserved site PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 SUPERFAMILY SSF54506 2 312 1.23E-100 T 26-04-2016 PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 Pfam PF05544 Proline racemase 6 312 7.9E-111 T 26-04-2016 IPR008794 Proline racemase family PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 PANTHER PTHR33442:SF2 2 314 4.1E-159 T 26-04-2016 PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 PIRSF PIRSF029792 1 313 3.1E-95 T 26-04-2016 IPR008794 Proline racemase family PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 Gene3D G3DSA:3.10.310.10 3 144 1.7E-51 T 26-04-2016 PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 PANTHER PTHR33442 2 314 4.1E-159 T 26-04-2016 PAM18_RS19235 0ad99d4bc145a1e0130e329a0bb77b46 314 Gene3D G3DSA:3.10.310.10 145 301 4.3E-54 T 26-04-2016 PAM18_RS08100 59864d58dae65208fceaa3f72a6578be 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.8E-19 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS08100 59864d58dae65208fceaa3f72a6578be 137 PANTHER PTHR21366:SF0 1 135 2.9E-25 T 26-04-2016 PAM18_RS08100 59864d58dae65208fceaa3f72a6578be 137 SUPERFAMILY SSF54593 12 130 4.16E-30 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS08100 59864d58dae65208fceaa3f72a6578be 137 Gene3D G3DSA:3.10.180.10 8 125 2.2E-26 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS08100 59864d58dae65208fceaa3f72a6578be 137 PANTHER PTHR21366 1 135 2.9E-25 T 26-04-2016 PAM18_RS22630 9d74211b1aa4e2eaa5e99c99259fbce8 426 PANTHER PTHR23028 161 359 1.4E-34 T 26-04-2016 PAM18_RS22630 9d74211b1aa4e2eaa5e99c99259fbce8 426 PANTHER PTHR23028 2 145 1.4E-34 T 26-04-2016 PAM18_RS22630 9d74211b1aa4e2eaa5e99c99259fbce8 426 PANTHER PTHR23028 378 414 1.4E-34 T 26-04-2016 PAM18_RS22630 9d74211b1aa4e2eaa5e99c99259fbce8 426 Pfam PF01757 Acyltransferase family 12 397 1.3E-30 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 Gene3D G3DSA:2.50.20.10 26 207 6.5E-57 T 26-04-2016 PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 208 30.367 T 26-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 SUPERFAMILY SSF89392 26 207 7.85E-53 T 26-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 205 2.0E-32 T 26-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 36 198 6.3E-57 T 26-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PAM18_RS12125 1ee4138acca8e6cadf4b340408743c65 208 PANTHER PTHR35869 1 208 7.1E-60 T 26-04-2016 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 SMART SM00829 9 313 3.1E-42 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 Gene3D G3DSA:3.40.50.720 141 252 2.7E-19 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 82 6.2E-7 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 PANTHER PTHR11695 11 318 9.0E-120 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 SUPERFAMILY SSF51735 106 277 2.22E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 314 2.1E-118 T 26-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 PANTHER PTHR11695:SF28 11 318 9.0E-120 T 26-04-2016 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 Gene3D G3DSA:3.90.180.10 11 140 1.4E-44 T 26-04-2016 IPR011032 GroES-like PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 Pfam PF00107 Zinc-binding dehydrogenase 146 260 1.1E-19 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS08800 7086e05a1ad24724ec479368413a6486 320 SUPERFAMILY SSF50129 11 136 8.49E-37 T 26-04-2016 IPR011032 GroES-like PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 PANTHER PTHR11014 5 378 1.1E-104 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 SUPERFAMILY SSF53187 5 173 5.71E-61 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 SUPERFAMILY SSF53187 304 379 5.71E-61 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 137 - T 26-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 6 377 2.2E-123 T 26-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 Gene3D G3DSA:3.40.630.10 323 379 3.1E-65 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 Gene3D G3DSA:3.40.630.10 5 182 3.1E-65 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 PANTHER PTHR11014:SF80 5 378 1.1E-104 T 26-04-2016 PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 SUPERFAMILY SSF55031 174 279 1.09E-21 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 Pfam PF07687 Peptidase dimerisation domain 171 280 3.1E-25 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 Gene3D G3DSA:3.30.70.360 183 278 2.3E-25 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS28170 241c42e76887f514e7f5a7b85a9465a6 384 Pfam PF01546 Peptidase family M20/M25/M40 66 378 6.0E-37 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS13610 a3ed59061c4c95fd880c4bd831f9eb6d 284 SUPERFAMILY SSF56436 36 283 3.06E-65 T 26-04-2016 IPR016187 C-type lectin fold PAM18_RS13610 a3ed59061c4c95fd880c4bd831f9eb6d 284 Pfam PF03781 Sulfatase-modifying factor enzyme 1 37 282 1.6E-68 T 26-04-2016 IPR005532 Sulfatase-modifying factor enzyme PAM18_RS13610 a3ed59061c4c95fd880c4bd831f9eb6d 284 PANTHER PTHR23150 38 284 1.3E-69 T 26-04-2016 PAM18_RS13610 a3ed59061c4c95fd880c4bd831f9eb6d 284 Gene3D G3DSA:3.90.1580.10 30 283 3.0E-63 T 26-04-2016 IPR005532 Sulfatase-modifying factor enzyme PAM18_RS21550 6f556a7aefe71f24f0401b0bda5c9c68 141 SUPERFAMILY SSF54593 6 131 2.01E-25 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21550 6f556a7aefe71f24f0401b0bda5c9c68 141 PANTHER PTHR39434:SF1 1 141 2.4E-51 T 26-04-2016 PAM18_RS21550 6f556a7aefe71f24f0401b0bda5c9c68 141 PANTHER PTHR39434 1 141 2.4E-51 T 26-04-2016 PAM18_RS21550 6f556a7aefe71f24f0401b0bda5c9c68 141 Gene3D G3DSA:3.10.180.10 6 138 1.3E-28 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21550 6f556a7aefe71f24f0401b0bda5c9c68 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 1.3E-8 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS24575 20966294842e4a57090713775c529bbb 337 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 6 337 59.542 T 26-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 PAM18_RS24575 20966294842e4a57090713775c529bbb 337 PANTHER PTHR19372 70 332 3.1E-148 T 26-04-2016 PAM18_RS24575 20966294842e4a57090713775c529bbb 337 SUPERFAMILY SSF56524 82 333 6.41E-92 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS24575 20966294842e4a57090713775c529bbb 337 PANTHER PTHR19372:SF1 70 332 3.1E-148 T 26-04-2016 PAM18_RS24575 20966294842e4a57090713775c529bbb 337 Gene3D G3DSA:3.90.420.10 85 334 2.1E-69 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS24575 20966294842e4a57090713775c529bbb 337 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 271 4.5E-29 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 SUPERFAMILY SSF103388 26 293 3.66E-99 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 Pfam PF04792 V antigen (LcrV) protein 74 294 3.4E-68 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 228 249 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 156 179 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 87 105 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 206 226 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 30 55 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 269 291 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 250 269 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 131 153 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS17125 ac721277f7fd1424af456c8220cb5d3f 294 PRINTS PR01592 Low calcium response V antigen signature 108 128 1.9E-69 T 26-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 SUPERFAMILY SSF55073 176 336 4.39E-49 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 PANTHER PTHR10799:SF750 56 334 1.6E-34 T 26-04-2016 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 Pfam PF00072 Response regulator receiver domain 21 133 3.5E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 SMART SM00448 19 133 3.6E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 Gene3D G3DSA:3.30.70.270 173 339 2.4E-54 T 26-04-2016 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 335 3.8E-52 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 333 9.6E-50 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 SMART SM00267 160 337 1.5E-60 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 Gene3D G3DSA:3.40.50.2300 20 159 1.0E-29 T 26-04-2016 PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 SUPERFAMILY SSF52172 19 151 1.01E-29 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS06300 d4e0a1be1dd767b04702d1762cf6a567 347 PANTHER PTHR10799 56 334 1.6E-34 T 26-04-2016 PAM18_RS17320 170254279b8d540d4e199c2694701bc4 289 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 61 270 6.2E-73 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS17320 170254279b8d540d4e199c2694701bc4 289 PANTHER PTHR30329:SF7 120 289 2.3E-95 T 26-04-2016 PAM18_RS17320 170254279b8d540d4e199c2694701bc4 289 Pfam PF09850 Type VI secretion system protein DotU 62 264 3.3E-66 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS17320 170254279b8d540d4e199c2694701bc4 289 PANTHER PTHR30329 120 289 2.3E-95 T 26-04-2016 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 PIRSF PIRSF039085 1 244 8.5E-106 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 Pfam PF00005 ABC transporter 22 169 8.2E-38 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 SUPERFAMILY SSF52540 1 239 1.06E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 SMART SM00382 30 217 2.5E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 PANTHER PTHR24220 3 244 4.4E-140 T 26-04-2016 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 PANTHER PTHR24220:SF327 3 244 4.4E-140 T 26-04-2016 PAM18_RS26535 4db2d126b982d1d33df12921cde75035 244 Gene3D G3DSA:3.40.50.300 1 240 3.8E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 1.0E-61 T 26-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 SUPERFAMILY SSF52540 8 282 4.31E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:3.40.50.300 18 180 1.3E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 PANTHER PTHR11603 1 303 3.6E-201 T 26-04-2016 PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 PIRSF PIRSF002849 1 304 1.7E-119 T 26-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:1.10.8.300 197 299 4.5E-31 T 26-04-2016 PAM18_RS10710 19b616e5f700db85a315d1e41ab27784 305 PANTHER PTHR11603:SF155 1 303 3.6E-201 T 26-04-2016 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Gene3D G3DSA:3.40.50.300 152 336 8.3E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 599 2.5E-239 T 26-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Gene3D G3DSA:1.10.8.60 337 410 2.7E-27 T 26-04-2016 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 7.9E-46 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 SUPERFAMILY SSF52540 148 396 7.98E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 SMART SM00382 189 328 6.4E-26 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 628 37.77 T 26-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Pfam PF01434 Peptidase family M41 387 598 1.0E-81 T 26-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 PANTHER PTHR23076 3 635 0.0 T 26-04-2016 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 Pfam PF06480 FtsH Extracellular 8 94 1.2E-12 T 26-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 SUPERFAMILY SSF140990 407 609 2.35E-77 T 26-04-2016 PAM18_RS24885 dfa7d296c9cdc7599d1ddcc60e3806a9 642 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 26-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 Gene3D G3DSA:3.40.50.300 6 160 2.6E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 SUPERFAMILY SSF52540 5 203 4.0E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 321 6.9E-8 T 26-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 199 1.6E-65 T 26-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 PANTHER PTHR11669 23 203 5.1E-63 T 26-04-2016 PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 PANTHER PTHR11669:SF8 23 203 5.1E-63 T 26-04-2016 PAM18_RS10270 d2e4fce8ca03dcf6c36eb20bdfe72d5f 328 Pfam PF13177 DNA polymerase III, delta subunit 20 159 2.1E-45 T 26-04-2016 PAM18_RS20500 a904cf70f797fd81f0df2aa28db4378e 251 Pfam PF08808 RES domain 63 207 1.1E-26 T 26-04-2016 IPR014914 RES domain PAM18_RS20500 a904cf70f797fd81f0df2aa28db4378e 251 SMART SM00953 71 208 2.7E-36 T 26-04-2016 IPR014914 RES domain PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 SUPERFAMILY SSF103473 5 385 6.93E-46 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 Gene3D G3DSA:1.20.1250.20 204 384 1.3E-18 T 26-04-2016 PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 Gene3D G3DSA:1.20.1250.20 12 185 2.2E-11 T 26-04-2016 PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 Pfam PF07690 Major Facilitator Superfamily 27 347 2.4E-23 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 PANTHER PTHR23523 1 394 2.5E-150 T 26-04-2016 PAM18_RS01365 a41b7645c5f21c030493af455dec7fcc 404 PANTHER PTHR23523:SF2 1 394 2.5E-150 T 26-04-2016 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 SUPERFAMILY SSF52172 1 173 9.68E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 PANTHER PTHR26402 1 221 4.5E-87 T 26-04-2016 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 PANTHER PTHR26402:SF316 1 221 4.5E-87 T 26-04-2016 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00448 1 112 2.1E-38 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00072 Response regulator receiver domain 3 112 5.5E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00862 145 218 9.4E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.1E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:1.10.10.10 125 220 1.6E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21865 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:3.40.50.2300 1 119 5.9E-38 T 26-04-2016 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 PANTHER PTHR23029:SF1 1 154 4.5E-35 T 26-04-2016 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 SMART SM00855 4 153 4.0E-15 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 PANTHER PTHR23029 1 154 4.5E-35 T 26-04-2016 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 PIRSF PIRSF000709 6 189 0.0026 T 26-04-2016 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 184 6.5E-42 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 Gene3D G3DSA:3.40.50.1240 1 188 5.0E-48 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS19175 0bab293b18f18d8381c3c740379019bd 194 SUPERFAMILY SSF53254 2 188 3.85E-47 T 26-04-2016 IPR029033 Histidine phosphatase superfamily PAM18_RS16280 063ab3e7af6eafb0a9808c19b53fb762 559 SMART SM00990 441 555 2.9E-49 T 26-04-2016 IPR014883 VRR-NUC domain GO:0016788 PAM18_RS16280 063ab3e7af6eafb0a9808c19b53fb762 559 PANTHER PTHR15749:SF3 11 559 0.0 T 26-04-2016 PAM18_RS16280 063ab3e7af6eafb0a9808c19b53fb762 559 PANTHER PTHR15749 11 559 0.0 T 26-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 PAM18_RS16280 063ab3e7af6eafb0a9808c19b53fb762 559 Pfam PF08774 VRR-NUC domain 443 555 7.9E-33 T 26-04-2016 IPR014883 VRR-NUC domain GO:0016788 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 167 217 3.76E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:1.10.10.60 164 220 5.6E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 PANTHER PTHR11019:SF81 15 275 2.0E-69 T 26-04-2016 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.9E-8 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.9E-8 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:1.10.10.60 221 271 7.0E-19 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:2.60.120.10 21 78 1.3E-5 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 220 269 4.21E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 PANTHER PTHR11019 15 275 2.0E-69 T 26-04-2016 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 SMART SM00342 184 267 4.1E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS17090 afb405577b63b4ca83abfec3e80382be 278 Pfam PF12833 Helix-turn-helix domain 192 268 3.6E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS22495 de7bbd091f798d57ae3f20863b8e77d6 253 Gene3D G3DSA:3.20.20.370 34 232 7.0E-11 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS22495 de7bbd091f798d57ae3f20863b8e77d6 253 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 6 158 1.7E-31 T 26-04-2016 IPR018763 Protein of unknown function DUF2334 PAM18_RS22495 de7bbd091f798d57ae3f20863b8e77d6 253 SUPERFAMILY SSF88713 6 166 8.34E-14 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS02490 17f5c7d6288c1dd46a8f133a57034375 252 SUPERFAMILY SSF88713 3 249 1.19E-88 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS02490 17f5c7d6288c1dd46a8f133a57034375 252 Pfam PF03746 LamB/YcsF family 4 242 2.0E-90 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS02490 17f5c7d6288c1dd46a8f133a57034375 252 PANTHER PTHR30292:SF0 1 252 1.3E-124 T 26-04-2016 PAM18_RS02490 17f5c7d6288c1dd46a8f133a57034375 252 PANTHER PTHR30292 1 252 1.3E-124 T 26-04-2016 PAM18_RS02490 17f5c7d6288c1dd46a8f133a57034375 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 40.913 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS05860 e643fae0d709ae7a55fe5597bfb07a7f 209 PANTHER PTHR11080 1 199 1.4E-53 T 26-04-2016 PAM18_RS05860 e643fae0d709ae7a55fe5597bfb07a7f 209 Pfam PF00857 Isochorismatase family 9 174 6.3E-31 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05860 e643fae0d709ae7a55fe5597bfb07a7f 209 PANTHER PTHR11080:SF13 1 199 1.4E-53 T 26-04-2016 PAM18_RS05860 e643fae0d709ae7a55fe5597bfb07a7f 209 Gene3D G3DSA:3.40.50.850 4 190 1.8E-44 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS05860 e643fae0d709ae7a55fe5597bfb07a7f 209 SUPERFAMILY SSF52499 6 187 2.35E-45 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 Gene3D G3DSA:1.25.10.10 123 226 6.9E-7 T 26-04-2016 IPR011989 Armadillo-like helical PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 PANTHER PTHR11795 196 529 1.2E-182 T 26-04-2016 PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 235 526 1.0E-132 T 26-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 SUPERFAMILY SSF48371 125 225 3.53E-7 T 26-04-2016 IPR016024 Armadillo-type fold GO:0005488 PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 Pfam PF13646 HEAT repeats 172 226 2.4E-6 T 26-04-2016 PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 PANTHER PTHR11795:SF349 196 529 1.2E-182 T 26-04-2016 PAM18_RS25440 a019aa9ad33088eb6db607ed9a113cb1 529 Pfam PF02653 Branched-chain amino acid transport system / permease component 237 512 2.0E-54 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS02350 1ba06bfb888529182ca9b9d62f821127 452 Pfam PF06123 Inner membrane protein CreD 5 438 6.6E-168 T 26-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD PAM18_RS02350 1ba06bfb888529182ca9b9d62f821127 452 PANTHER PTHR30092 1 452 4.1E-198 T 26-04-2016 PAM18_RS02350 1ba06bfb888529182ca9b9d62f821127 452 PIRSF PIRSF004548 1 451 1.1E-178 T 26-04-2016 IPR010364 Uncharacterised protein family, inner membrane CreD PAM18_RS21240 7045f794445a5d9c82adf81fd4fae5bf 450 PANTHER PTHR16943:SF8 1 442 5.5E-187 T 26-04-2016 PAM18_RS21240 7045f794445a5d9c82adf81fd4fae5bf 450 SUPERFAMILY SSF103378 2 446 1.31E-121 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS21240 7045f794445a5d9c82adf81fd4fae5bf 450 PANTHER PTHR16943 1 442 5.5E-187 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS21240 7045f794445a5d9c82adf81fd4fae5bf 450 Pfam PF03972 MmgE/PrpD family 5 440 2.4E-136 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS21240 7045f794445a5d9c82adf81fd4fae5bf 450 Gene3D G3DSA:3.30.1330.120 266 400 8.4E-26 T 26-04-2016 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 Pfam PF02308 MgtC family 11 131 4.3E-35 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PANTHER PTHR33778:SF3 1 234 3.2E-122 T 26-04-2016 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PANTHER PTHR33778 1 234 3.2E-122 T 26-04-2016 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 59 81 1.4E-43 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 86 110 1.4E-43 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.4E-43 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS24170 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.4E-43 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 Gene3D G3DSA:1.10.10.10 137 192 1.8E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 PANTHER PTHR30173 10 192 4.7E-90 T 26-04-2016 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 Pfam PF04545 Sigma-70, region 4 139 188 1.0E-11 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 SUPERFAMILY SSF88946 15 122 2.04E-27 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 189 1.7E-30 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 Pfam PF04542 Sigma-70 region 2 39 106 2.0E-19 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 SUPERFAMILY SSF88659 130 191 1.83E-10 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 Gene3D G3DSA:1.10.1740.10 13 127 3.7E-33 T 26-04-2016 PAM18_RS16770 104f6655893989db172328c7972d8cfd 196 PANTHER PTHR30173:SF26 10 192 4.7E-90 T 26-04-2016 PAM18_RS27930 ffe24c214affeab2dbfc90d10437fe4a 130 SUPERFAMILY SSF55718 11 116 4.71E-5 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS27930 ffe24c214affeab2dbfc90d10437fe4a 130 Gene3D G3DSA:3.30.1050.10 15 120 9.8E-5 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS16235 e8fe4fc96625c15a9a4cb908bbda4da9 340 Gene3D G3DSA:1.20.58.340 265 337 6.6E-18 T 26-04-2016 PAM18_RS16235 e8fe4fc96625c15a9a4cb908bbda4da9 340 SUPERFAMILY SSF143865 11 272 3.27E-34 T 26-04-2016 PAM18_RS16235 e8fe4fc96625c15a9a4cb908bbda4da9 340 PANTHER PTHR21535 114 338 2.6E-28 T 26-04-2016 PAM18_RS16235 e8fe4fc96625c15a9a4cb908bbda4da9 340 Pfam PF01544 CorA-like Mg2+ transporter protein 49 332 3.6E-51 T 26-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PAM18_RS16235 e8fe4fc96625c15a9a4cb908bbda4da9 340 SUPERFAMILY SSF144083 275 336 2.48E-15 T 26-04-2016 PAM18_RS20580 e67f5f775fb4fc48910968d65d7ef859 103 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 29 84 1.0E-11 T 26-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal PAM18_RS20580 e67f5f775fb4fc48910968d65d7ef859 103 SUPERFAMILY SSF50249 6 89 2.23E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 Pfam PF00106 short chain dehydrogenase 14 202 3.8E-57 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 Gene3D G3DSA:3.40.50.720 13 247 1.4E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 1.4E-8 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PANTHER PTHR24322 18 146 3.3E-52 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PANTHER PTHR24322 162 194 3.3E-52 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 SUPERFAMILY SSF51735 11 268 1.89E-68 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 8.2E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 8.2E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 8.2E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.2E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 8.2E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04995 e2505f7044ad7e1ed5bb6aaf6a7794e8 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 193 5.4E-4 T 26-04-2016 PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 PANTHER PTHR12110:SF3 1 255 6.5E-109 T 26-04-2016 PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 PIRSF PIRSF006241 1 260 4.5E-96 T 26-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 SUPERFAMILY SSF51658 1 256 7.05E-88 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 5.1E-129 T 26-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 Gene3D G3DSA:3.20.20.150 1 255 1.7E-94 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 PANTHER PTHR12110 1 255 6.5E-109 T 26-04-2016 PAM18_RS18580 f7728d0e85513bf5b30426271a64bab0 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 3.7E-34 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 SUPERFAMILY SSF103473 8 198 1.27E-39 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 PANTHER PTHR23501 14 478 3.1E-264 T 26-04-2016 PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 Gene3D G3DSA:1.20.1250.20 17 202 4.1E-28 T 26-04-2016 PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 SUPERFAMILY SSF103473 213 469 7.19E-25 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 PANTHER PTHR23501:SF26 14 478 3.1E-264 T 26-04-2016 PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 Pfam PF07690 Major Facilitator Superfamily 19 420 5.9E-43 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS19275 7ab5a0d5238be51a4a0e3c07f2b709e2 480 Gene3D G3DSA:1.20.1250.20 266 431 5.0E-13 T 26-04-2016 PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 PANTHER PTHR30435 1 261 3.6E-135 T 26-04-2016 PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 8.7E-117 T 26-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 PANTHER PTHR30435:SF19 1 261 3.6E-135 T 26-04-2016 PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 257 3.7E-26 T 26-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.2E-49 T 26-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 5.3E-32 T 26-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF00460 Flagella basal body rod protein 5 35 9.3E-11 T 26-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 26-04-2016 IPR019776 Flagellar basal body rod protein, conserved site PAM18_RS20235 2aaaa5346e87c49bf9be3dc3a579885b 261 SUPERFAMILY SSF117143 92 222 2.48E-36 T 26-04-2016 PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 PANTHER PTHR35272:SF3 1 242 3.1E-106 T 26-04-2016 PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 PANTHER PTHR35272 1 242 3.1E-106 T 26-04-2016 PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF52833 96 236 1.16E-36 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF54423 25 86 1.24E-13 T 26-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF13098 Thioredoxin-like domain 114 237 9.6E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.10.450.70 25 87 2.0E-22 T 26-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.40.30.10 114 237 1.5E-43 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 ProSitePatterns PS00194 Thioredoxin family active site. 122 140 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS06120 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 82 3.8E-18 T 26-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 Pfam PF01047 MarR family 42 100 1.5E-15 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.0E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.0E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.0E-6 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 Gene3D G3DSA:1.10.10.10 7 148 1.8E-42 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 PANTHER PTHR33164 6 144 2.4E-55 T 26-04-2016 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 PANTHER PTHR33164:SF5 6 144 2.4E-55 T 26-04-2016 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 SMART SM00347 35 133 1.2E-22 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10845 88ea5b16c74d41b6e4035955aade0bbf 151 SUPERFAMILY SSF46785 8 148 2.61E-35 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 SMART SM00240 27 78 6.5E-5 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 PANTHER PTHR16079 1 504 0.0 T 26-04-2016 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 Gene3D G3DSA:2.60.200.20 17 101 6.1E-19 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 Pfam PF00498 FHA domain 29 97 4.9E-15 T 26-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 PANTHER PTHR16079:SF3 1 504 0.0 T 26-04-2016 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 SUPERFAMILY SSF49879 13 107 1.11E-21 T 26-04-2016 IPR008984 SMAD/FHA domain GO:0005515 PAM18_RS00415 c4ea98bb1ce7743b9167c43e84625f36 505 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 499 3.0E-166 T 26-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein PAM18_RS17015 356f3a3dadef5372d1f3352c1605cc17 113 Gene3D G3DSA:3.30.70.970 11 105 2.0E-5 T 26-04-2016 IPR009671 Regulator of ribonuclease activity B domain PAM18_RS17015 356f3a3dadef5372d1f3352c1605cc17 113 Pfam PF06877 Regulator of ribonuclease activity B 9 104 3.4E-21 T 26-04-2016 IPR009671 Regulator of ribonuclease activity B domain PAM18_RS17015 356f3a3dadef5372d1f3352c1605cc17 113 SUPERFAMILY SSF89946 5 107 3.4E-23 T 26-04-2016 IPR009671 Regulator of ribonuclease activity B domain PAM18_RS23640 397139c9c6896c1fdd309041d3330141 149 PANTHER PTHR36930:SF1 2 149 2.8E-41 T 26-04-2016 PAM18_RS23640 397139c9c6896c1fdd309041d3330141 149 Gene3D G3DSA:2.40.33.20 4 143 9.8E-28 T 26-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like PAM18_RS23640 397139c9c6896c1fdd309041d3330141 149 Pfam PF03473 MOSC domain 39 140 4.3E-6 T 26-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PAM18_RS23640 397139c9c6896c1fdd309041d3330141 149 SUPERFAMILY SSF50800 4 143 3.19E-34 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS23640 397139c9c6896c1fdd309041d3330141 149 PANTHER PTHR36930 2 149 2.8E-41 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.30.590.10 106 455 4.7E-138 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 PANTHER PTHR20852:SF15 7 138 1.1E-267 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 PANTHER PTHR20852:SF15 160 469 1.1E-267 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 PANTHER PTHR20852 7 138 1.1E-267 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 PANTHER PTHR20852 160 469 1.1E-267 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 26-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 9.3E-139 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.10.20.70 7 105 8.3E-37 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 SMART SM01230 102 379 7.5E-147 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF54368 7 100 1.96E-33 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 26-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.9E-204 T 26-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 26-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF55931 102 468 1.96E-136 T 26-04-2016 PAM18_RS26755 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 95 5.8E-30 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS04870 3ad9fb34e333c7f12fc00543d88f45e2 340 Gene3D G3DSA:3.40.50.300 112 316 1.1E-89 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04870 3ad9fb34e333c7f12fc00543d88f45e2 340 PANTHER PTHR30473:SF1 2 339 2.3E-189 T 26-04-2016 PAM18_RS04870 3ad9fb34e333c7f12fc00543d88f45e2 340 PANTHER PTHR30473 2 339 2.3E-189 T 26-04-2016 PAM18_RS04870 3ad9fb34e333c7f12fc00543d88f45e2 340 SUPERFAMILY SSF52540 112 293 2.62E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04870 3ad9fb34e333c7f12fc00543d88f45e2 340 Pfam PF02562 PhoH-like protein 113 316 8.5E-95 T 26-04-2016 IPR003714 PhoH-like protein GO:0005524 PAM18_RS10655 416a15ed0f09c57ac2d1790c40f4d6c6 600 PANTHER PTHR13943 41 114 1.4E-217 T 26-04-2016 PAM18_RS10655 416a15ed0f09c57ac2d1790c40f4d6c6 600 PANTHER PTHR13943 137 580 1.4E-217 T 26-04-2016 PAM18_RS10655 416a15ed0f09c57ac2d1790c40f4d6c6 600 Pfam PF07287 Protein of unknown function (DUF1446) 7 348 4.1E-128 T 26-04-2016 IPR010839 Protein of unknown function DUF1446 PAM18_RS10655 416a15ed0f09c57ac2d1790c40f4d6c6 600 PANTHER PTHR13943:SF48 41 114 1.4E-217 T 26-04-2016 PAM18_RS10655 416a15ed0f09c57ac2d1790c40f4d6c6 600 PANTHER PTHR13943:SF48 137 580 1.4E-217 T 26-04-2016 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 SUPERFAMILY SSF52172 140 265 2.99E-15 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 SUPERFAMILY SSF52172 4 123 4.13E-30 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 Pfam PF00072 Response regulator receiver domain 8 114 7.7E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 Pfam PF00072 Response regulator receiver domain 143 247 1.3E-7 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 SMART SM00448 141 253 0.051 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 SMART SM00448 6 117 2.0E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 PANTHER PTHR26402:SF509 6 122 3.3E-49 T 26-04-2016 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 PANTHER PTHR26402 6 122 3.3E-49 T 26-04-2016 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 Gene3D G3DSA:3.40.50.2300 141 261 2.4E-14 T 26-04-2016 PAM18_RS10680 bfd14d9373f9737c142e1f76b9dccab9 303 Gene3D G3DSA:3.40.50.2300 6 123 1.5E-30 T 26-04-2016 PAM18_RS11515 c62b6e401d8d9ed654842cdb75c5908c 488 SUPERFAMILY SSF116734 3 179 1.96E-16 T 26-04-2016 PAM18_RS11515 c62b6e401d8d9ed654842cdb75c5908c 488 SUPERFAMILY SSF116734 166 377 1.29E-32 T 26-04-2016 PAM18_RS11515 c62b6e401d8d9ed654842cdb75c5908c 488 Pfam PF01420 Type I restriction modification DNA specificity domain 181 347 8.5E-9 T 26-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PAM18_RS19830 723847e7bdab8834237c3acca060f431 762 PRINTS PR01300 Pyocin S killer protein signature 465 488 4.1E-10 T 26-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PAM18_RS19830 723847e7bdab8834237c3acca060f431 762 PRINTS PR01300 Pyocin S killer protein signature 384 405 4.1E-10 T 26-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PAM18_RS19830 723847e7bdab8834237c3acca060f431 762 PRINTS PR01300 Pyocin S killer protein signature 430 448 4.1E-10 T 26-04-2016 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 PAM18_RS19830 723847e7bdab8834237c3acca060f431 762 Pfam PF06958 S-type Pyocin 483 627 5.8E-36 T 26-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PAM18_RS19830 723847e7bdab8834237c3acca060f431 762 SUPERFAMILY SSF69369 421 655 1.44E-43 T 26-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 SUPERFAMILY SSF46689 191 238 2.69E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 PANTHER PTHR11019 36 293 1.1E-93 T 26-04-2016 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 Gene3D G3DSA:1.10.10.60 241 288 2.0E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 SMART SM00342 204 287 6.2E-31 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 Gene3D G3DSA:1.10.10.60 191 240 4.3E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 1.8E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 1.8E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 Pfam PF12833 Helix-turn-helix domain 210 288 3.5E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 PANTHER PTHR11019:SF105 36 293 1.1E-93 T 26-04-2016 PAM18_RS05290 f9c08775212b28b223554a83913d152a 293 SUPERFAMILY SSF46689 240 289 7.17E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.1E-106 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 235 281 1.4E-31 T 26-04-2016 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.72 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:3.40.1380.10 64 191 2.0E-44 T 26-04-2016 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Pfam PF00231 ATP synthase 5 285 1.6E-91 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.4E-37 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.4E-37 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.4E-37 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.4E-37 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 PANTHER PTHR11693 1 286 2.3E-130 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 26-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 SUPERFAMILY SSF52943 2 286 1.83E-95 T 26-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 19 60 8.5E-38 T 26-04-2016 PAM18_RS29045 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 201 234 8.5E-38 T 26-04-2016 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PANTHER PTHR11019:SF123 10 148 3.4E-112 T 26-04-2016 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PANTHER PTHR11019:SF123 172 296 3.4E-112 T 26-04-2016 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PANTHER PTHR11019 10 148 3.4E-112 T 26-04-2016 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PANTHER PTHR11019 172 296 3.4E-112 T 26-04-2016 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 Pfam PF12833 Helix-turn-helix domain 211 289 2.7E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 188 239 1.43E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 241 289 3.37E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:1.10.10.60 242 289 4.6E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:2.60.120.280 33 85 8.8E-4 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.3E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.3E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:1.10.10.60 185 241 6.7E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13905 b3796686441ea8107594b8596ff04f3b 301 SMART SM00342 205 288 1.3E-29 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 Gene3D G3DSA:1.20.1250.20 498 518 1.3E-9 T 26-04-2016 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 Gene3D G3DSA:1.20.1250.20 281 451 1.3E-9 T 26-04-2016 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 SUPERFAMILY SSF103473 17 213 8.89E-35 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 SUPERFAMILY SSF103473 266 439 8.89E-35 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 SUPERFAMILY SSF103473 493 517 8.89E-35 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 PANTHER PTHR23501:SF71 1 524 4.5E-212 T 26-04-2016 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 Gene3D G3DSA:1.20.1250.20 27 204 4.7E-14 T 26-04-2016 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 PANTHER PTHR23501 1 524 4.5E-212 T 26-04-2016 PAM18_RS10915 616d299b450a78a31edd8c5bf638f4c4 530 Pfam PF07690 Major Facilitator Superfamily 35 429 1.0E-30 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 105 2.6E-45 T 26-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 SUPERFAMILY SSF54523 38 124 5.49E-22 T 26-04-2016 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 Gene3D G3DSA:3.30.1300.30 34 125 4.6E-27 T 26-04-2016 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 PANTHER PTHR38779:SF2 1 123 6.6E-46 T 26-04-2016 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 1.7E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 7.1E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 PANTHER PTHR38779 1 123 6.6E-46 T 26-04-2016 PAM18_RS09570 60c64b33df5d64cf7b6ed800a3a94ef5 129 Pfam PF02501 Type II secretion system (T2SS), protein I 40 125 1.1E-29 T 26-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 PAM18_RS13105 2df69e5a0ce957da59a94e919f0683fe 171 Gene3D G3DSA:1.20.120.450 13 149 8.1E-9 T 26-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PAM18_RS13105 2df69e5a0ce957da59a94e919f0683fe 171 PANTHER PTHR37302 7 170 4.5E-66 T 26-04-2016 PAM18_RS13105 2df69e5a0ce957da59a94e919f0683fe 171 Pfam PF05163 DinB family 1 170 1.5E-41 T 26-04-2016 IPR007837 DNA damage-inducible protein DinB PAM18_RS13105 2df69e5a0ce957da59a94e919f0683fe 171 SUPERFAMILY SSF109854 15 161 5.49E-21 T 26-04-2016 PAM18_RS13105 2df69e5a0ce957da59a94e919f0683fe 171 PANTHER PTHR37302:SF1 7 170 4.5E-66 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 PIRSF PIRSF001589 1 648 3.5E-160 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 Pfam PF00733 Asparagine synthase 254 646 7.3E-115 T 26-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 Pfam PF13537 Glutamine amidotransferase domain 50 168 3.3E-40 T 26-04-2016 IPR017932 Glutamine amidotransferase type 2 domain PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 SUPERFAMILY SSF52402 241 394 7.85E-95 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 SUPERFAMILY SSF52402 501 641 7.85E-95 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 581 1.1E-141 T 26-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 SUPERFAMILY SSF56235 1 218 9.44E-62 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 Gene3D G3DSA:3.40.50.620 228 390 3.9E-92 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 Gene3D G3DSA:3.40.50.620 496 645 3.9E-92 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 Gene3D G3DSA:3.60.20.10 1 217 5.9E-67 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 PANTHER PTHR11772 492 647 6.1E-190 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 PANTHER PTHR11772 2 396 6.1E-190 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 PANTHER PTHR11772:SF10 492 647 6.1E-190 T 26-04-2016 PAM18_RS26140 a6556769f54c3a6e0bbb8183413c1dd7 648 PANTHER PTHR11772:SF10 2 396 6.1E-190 T 26-04-2016 PAM18_RS17035 3959daea6fbf95bd68041be633aec9ed 206 Pfam PF06578 YOP proteins translocation protein K (YscK) 3 206 3.1E-91 T 26-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 PAM18_RS17035 3959daea6fbf95bd68041be633aec9ed 206 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 1 206 4.0E-99 T 26-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 Gene3D G3DSA:1.20.5.100 231 260 1.5E-7 T 26-04-2016 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 SUPERFAMILY SSF46626 16 159 1.5E-45 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 SUPERFAMILY SSF46626 199 223 1.5E-45 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 PANTHER PTHR10266 5 163 6.5E-70 T 26-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 PANTHER PTHR10266 203 260 6.5E-70 T 26-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 Gene3D G3DSA:1.10.760.10 20 225 3.5E-58 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 Pfam PF02167 Cytochrome C1 family 91 259 7.3E-10 T 26-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 PANTHER PTHR10266:SF3 5 163 6.5E-70 T 26-04-2016 PAM18_RS23095 93bc7cc205aae3c855b3ea9a148904c0 260 PANTHER PTHR10266:SF3 203 260 6.5E-70 T 26-04-2016 PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 18 326 3.4E-120 T 26-04-2016 IPR020020 Luciferase-type oxidoreductase PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 PANTHER PTHR30011:SF14 9 323 1.3E-88 T 26-04-2016 PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 Gene3D G3DSA:3.20.20.30 19 327 3.8E-60 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 PANTHER PTHR30011 9 323 1.3E-88 T 26-04-2016 PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 SUPERFAMILY SSF51679 28 326 9.86E-56 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS19660 93d17582b0c9c7018601afed78f063bf 339 Pfam PF00296 Luciferase-like monooxygenase 31 239 1.8E-37 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 PANTHER PTHR23501 3 396 4.0E-123 T 26-04-2016 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 Gene3D G3DSA:1.20.1250.20 13 188 2.2E-24 T 26-04-2016 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 Gene3D G3DSA:1.20.1250.20 213 383 1.1E-17 T 26-04-2016 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 SUPERFAMILY SSF103473 11 385 4.05E-55 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 Pfam PF07690 Major Facilitator Superfamily 215 387 2.3E-11 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 Pfam PF07690 Major Facilitator Superfamily 19 200 3.1E-23 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15140 22cd4ef8261ab4e4f4cadd6238bb9a9e 398 PANTHER PTHR23501:SF88 3 396 4.0E-123 T 26-04-2016 PAM18_RS12635 ed1597e63a63ee10c21f6207ae807ab5 398 Gene3D G3DSA:3.90.226.10 46 210 8.4E-33 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS12635 ed1597e63a63ee10c21f6207ae807ab5 398 PANTHER PTHR10381:SF23 85 268 2.0E-35 T 26-04-2016 PAM18_RS12635 ed1597e63a63ee10c21f6207ae807ab5 398 Pfam PF00574 Clp protease 62 210 2.7E-20 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS12635 ed1597e63a63ee10c21f6207ae807ab5 398 SUPERFAMILY SSF52096 48 210 2.78E-36 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS12635 ed1597e63a63ee10c21f6207ae807ab5 398 PANTHER PTHR10381 85 268 2.0E-35 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 SUPERFAMILY SSF56954 2 477 2.75E-118 T 26-04-2016 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 PANTHER PTHR30203 7 493 0.0 T 26-04-2016 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 PANTHER PTHR30203:SF7 7 493 0.0 T 26-04-2016 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 4.6E-129 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 Gene3D G3DSA:1.20.1600.10 55 477 7.5E-119 T 26-04-2016 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 Pfam PF02321 Outer membrane efflux protein 291 472 1.7E-30 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS12955 1ac97dacd6634658f21c869a2e228648 498 Pfam PF02321 Outer membrane efflux protein 73 265 1.8E-28 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 PANTHER PTHR11082:SF25 5 326 5.0E-148 T 26-04-2016 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 Pfam PF01207 Dihydrouridine synthase (Dus) 16 320 5.8E-110 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 SUPERFAMILY SSF51395 13 322 1.26E-94 T 26-04-2016 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 321 1.1E-126 T 26-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 Gene3D G3DSA:3.20.20.70 10 248 3.0E-87 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 PANTHER PTHR11082 5 326 5.0E-148 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 PIRSF PIRSF006621 3 330 3.7E-107 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 Gene3D G3DSA:1.10.1200.80 257 323 1.0E-21 T 26-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.992 T 26-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 PAM18_RS25405 cdaf96fb766cfc0e43c06c7b097a97a0 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 26-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 2.6E-82 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 26-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 269 2.7E-94 T 26-04-2016 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 262 2.5E-28 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 PANTHER PTHR22748:SF7 1 269 2.1E-132 T 26-04-2016 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 PANTHER PTHR22748 1 269 2.1E-132 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 Gene3D G3DSA:3.60.10.10 1 269 8.1E-81 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS12855 8c4d6f97232bf0386bc98681ccd93952 270 SUPERFAMILY SSF56219 1 269 5.1E-83 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 Gene3D G3DSA:1.10.10.10 6 75 9.6E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 SUPERFAMILY SSF55781 62 241 4.38E-38 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 SUPERFAMILY SSF46785 7 74 3.3E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 SMART SM00346 8 94 3.3E-7 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 Pfam PF01614 Bacterial transcriptional regulator 128 238 1.0E-15 T 26-04-2016 IPR014757 Transcription regulator IclR, C-terminal PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 PANTHER PTHR30136 8 241 1.1E-84 T 26-04-2016 PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 Gene3D G3DSA:3.30.450.40 76 235 5.1E-41 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 PANTHER PTHR30136:SF14 8 241 1.1E-84 T 26-04-2016 PAM18_RS09215 744c5ff1784255472a23d982d66dfcec 242 Pfam PF09339 IclR helix-turn-helix domain 8 55 2.3E-10 T 26-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PAM18_RS21565 de965375f6ad733bb2460ff5ae4c6625 144 SUPERFAMILY SSF55298 7 142 4.08E-45 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS21565 de965375f6ad733bb2460ff5ae4c6625 144 Gene3D G3DSA:3.30.1330.40 10 142 2.4E-49 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS21565 de965375f6ad733bb2460ff5ae4c6625 144 PANTHER PTHR11803 1 143 4.2E-34 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS21565 de965375f6ad733bb2460ff5ae4c6625 144 PANTHER PTHR11803:SF2 1 143 4.2E-34 T 26-04-2016 PAM18_RS21565 de965375f6ad733bb2460ff5ae4c6625 144 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 141 2.5E-25 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 352 182.798 T 26-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 8.7E-117 T 26-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF52540 24 255 1.84E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 PANTHER PTHR13779:SF25 1 337 3.7E-189 T 26-04-2016 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:3.40.50.300 24 179 2.4E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.8.60 187 259 2.5E-34 T 26-04-2016 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF46785 261 334 1.47E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.2E-151 T 26-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 337 1.0E-42 T 26-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 PANTHER PTHR13779 1 337 3.7E-189 T 26-04-2016 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 SMART SM00382 55 182 7.4E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 2.4E-33 T 26-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PAM18_RS20780 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.10.10 261 332 8.0E-35 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 Pfam PF00593 TonB dependent receptor 473 706 3.3E-35 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 PANTHER PTHR32552 56 708 0.0 T 26-04-2016 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 PANTHER PTHR32552 2 35 0.0 T 26-04-2016 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 SUPERFAMILY SSF56935 22 708 6.23E-140 T 26-04-2016 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 707 4.8E-114 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 PANTHER PTHR32552:SF29 56 708 0.0 T 26-04-2016 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 PANTHER PTHR32552:SF29 2 35 0.0 T 26-04-2016 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 Gene3D G3DSA:2.170.130.10 45 170 1.5E-34 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 Gene3D G3DSA:2.40.170.20 178 708 1.9E-162 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS25330 421143ddc3089cc5e937669ab75d736a 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 163 3.5E-16 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 Gene3D G3DSA:3.30.420.10 3 176 1.4E-50 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 PANTHER PTHR23044 3 179 5.0E-75 T 26-04-2016 PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 Pfam PF00929 Exonuclease 5 175 2.2E-18 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 PANTHER PTHR23044:SF5 3 179 5.0E-75 T 26-04-2016 PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 SUPERFAMILY SSF53098 2 178 1.04E-30 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS17795 707247421cfff71a9bf61c9789dbcc66 183 SMART SM00479 3 183 7.0E-7 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS21040 86330131498ca68c51ddce59b31402cd 182 PANTHER PTHR30529:SF3 2 182 5.3E-113 T 26-04-2016 PAM18_RS21040 86330131498ca68c51ddce59b31402cd 182 SUPERFAMILY SSF81342 4 179 7.38E-37 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS21040 86330131498ca68c51ddce59b31402cd 182 PANTHER PTHR30529 2 182 5.3E-113 T 26-04-2016 PAM18_RS21040 86330131498ca68c51ddce59b31402cd 182 Pfam PF01292 Prokaryotic cytochrome b561 9 179 1.2E-24 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PRINTS PR00969 Pili chaperone signature 128 143 4.8E-20 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PRINTS PR00969 Pili chaperone signature 104 121 4.8E-20 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PRINTS PR00969 Pili chaperone signature 27 36 4.8E-20 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PRINTS PR00969 Pili chaperone signature 76 97 4.8E-20 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 SUPERFAMILY SSF49584 140 235 5.36E-11 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 146 2.2E-34 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 SUPERFAMILY SSF49354 23 146 1.2E-34 T 26-04-2016 IPR008962 PapD-like PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 Gene3D G3DSA:2.60.40.1070 148 236 2.1E-11 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 235 1.4E-9 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PANTHER PTHR30251:SF2 8 245 4.6E-103 T 26-04-2016 PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 Gene3D G3DSA:2.60.40.360 27 147 1.1E-34 T 26-04-2016 IPR008962 PapD-like PAM18_RS04365 afdccb0930ec9e5db1bf7ba3c643cd38 246 PANTHER PTHR30251 8 245 4.6E-103 T 26-04-2016 PAM18_RS03745 065eafd9f15f218b5788e01cd02a4a0d 148 Pfam PF07681 DoxX 15 95 2.6E-15 T 26-04-2016 IPR032808 DoxX family PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 Gene3D G3DSA:3.40.50.300 54 173 1.4E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 Gene3D G3DSA:3.40.50.300 208 244 1.4E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 SUPERFAMILY SSF52540 57 96 6.45E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 SUPERFAMILY SSF52540 316 402 6.45E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 SUPERFAMILY SSF52540 8 158 2.58E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 Pfam PF04851 Type III restriction enzyme, res subunit 4 242 6.9E-16 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 SUPERFAMILY SSF52540 199 243 2.58E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03610 2387845bf27596680bc03b7eba6dbffd 882 SMART SM00487 42 268 0.0096 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 PANTHER PTHR11695:SF38 12 349 1.2E-110 T 26-04-2016 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 141 1.1E-33 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 PANTHER PTHR11695 12 349 1.2E-110 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 SUPERFAMILY SSF51735 147 310 6.34E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 SUPERFAMILY SSF50129 1 179 1.67E-53 T 26-04-2016 IPR011032 GroES-like PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 SMART SM00829 7 343 9.7E-7 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 Gene3D G3DSA:3.40.50.720 176 290 3.6E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 Pfam PF00107 Zinc-binding dehydrogenase 182 305 2.4E-24 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS04295 fba76dc181f77932afad5b4756554192 352 Gene3D G3DSA:3.90.180.10 1 175 2.8E-60 T 26-04-2016 IPR011032 GroES-like PAM18_RS12615 de629f196552f416249da1abe6dd3030 181 Pfam PF07471 Phage DNA packaging protein Nu1 14 161 3.4E-21 T 26-04-2016 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit PAM18_RS12615 de629f196552f416249da1abe6dd3030 181 Gene3D G3DSA:1.10.10.10 13 53 4.4E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02135 8408a7e66db378749f056b80172fee00 189 PANTHER PTHR30529:SF5 2 184 5.0E-96 T 26-04-2016 PAM18_RS02135 8408a7e66db378749f056b80172fee00 189 PANTHER PTHR30529 2 184 5.0E-96 T 26-04-2016 PAM18_RS02135 8408a7e66db378749f056b80172fee00 189 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.3E-31 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS02135 8408a7e66db378749f056b80172fee00 189 SUPERFAMILY SSF81342 4 181 4.55E-42 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 Pfam PF00578 AhpC/TSA family 26 132 4.3E-18 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 PANTHER PTHR10681:SF107 25 152 2.1E-40 T 26-04-2016 PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 SUPERFAMILY SSF52833 6 150 5.8E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 PANTHER PTHR10681 25 152 2.1E-40 T 26-04-2016 PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 Gene3D G3DSA:3.40.30.10 10 150 4.0E-29 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20850 67fa2c10583f99dda767408fee617883 154 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS09405 a14cdd304a1873c42c66fadabda717dd 285 Gene3D G3DSA:3.40.50.1820 55 265 4.8E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09405 a14cdd304a1873c42c66fadabda717dd 285 SUPERFAMILY SSF53474 58 252 1.03E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09405 a14cdd304a1873c42c66fadabda717dd 285 Pfam PF12146 Serine aminopeptidase, S33 68 176 6.2E-12 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS09405 a14cdd304a1873c42c66fadabda717dd 285 PANTHER PTHR10992 3 268 1.4E-45 T 26-04-2016 PAM18_RS09405 a14cdd304a1873c42c66fadabda717dd 285 PANTHER PTHR10992:SF107 3 268 1.4E-45 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Gene3D G3DSA:3.50.50.60 368 448 1.4E-8 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 2.7E-19 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 2.7E-19 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 2.7E-19 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 2.7E-19 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PANTHER PTHR11938 1 417 3.5E-204 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PANTHER PTHR11938:SF108 1 417 3.5E-204 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 SUPERFAMILY SSF46548 15 151 1.52E-27 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Gene3D G3DSA:1.10.1060.10 8 138 2.1E-33 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Gene3D G3DSA:3.50.50.60 234 367 9.1E-32 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 SUPERFAMILY SSF51971 139 381 7.65E-51 T 26-04-2016 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 296 1.2E-9 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 164 1.2E-9 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 411 429 1.2E-9 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Gene3D G3DSA:3.50.50.60 139 233 1.5E-17 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 437 3.5E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02225 4e6b33a921f121377766963702c5c7e3 455 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 126 3.8E-33 T 26-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 2 124 6.53E-15 T 26-04-2016 PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Gene3D G3DSA:3.40.50.620 121 274 1.5E-20 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 PANTHER PTHR31964:SF41 116 282 2.2E-64 T 26-04-2016 PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Pfam PF00582 Universal stress protein family 133 272 8.4E-14 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 PANTHER PTHR31964 116 282 2.2E-64 T 26-04-2016 PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 133 276 1.34E-16 T 26-04-2016 PAM18_RS16705 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Gene3D G3DSA:3.40.50.620 4 120 4.2E-9 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS02595 88acb75011eb20b6b5c1992deb7304fa 147 PANTHER PTHR30154:SF21 1 147 4.1E-64 T 26-04-2016 PAM18_RS02595 88acb75011eb20b6b5c1992deb7304fa 147 PANTHER PTHR30154 1 147 4.1E-64 T 26-04-2016 PAM18_RS02595 88acb75011eb20b6b5c1992deb7304fa 147 Gene3D G3DSA:1.10.10.10 1 53 2.6E-6 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 PANTHER PTHR11941 3 250 9.5E-134 T 26-04-2016 PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 252 2.4E-50 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 SUPERFAMILY SSF52096 4 252 3.78E-68 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 PANTHER PTHR11941:SF15 3 250 9.5E-134 T 26-04-2016 PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 Gene3D G3DSA:3.90.226.10 4 196 4.6E-51 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS20545 973f54e7254fb917eaecf302b3ea4a6f 253 Gene3D G3DSA:1.10.12.10 199 253 3.3E-15 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 8 193 8.8E-104 T 26-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 PIRSF PIRSF000013 1 198 7.4E-109 T 26-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 SUPERFAMILY SSF48695 15 198 5.85E-67 T 26-04-2016 IPR011031 Multihaem cytochrome PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 PANTHER PTHR30333 1 198 4.7E-118 T 26-04-2016 PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 192 3.8E-75 T 26-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Gene3D G3DSA:1.10.3820.10 19 191 1.2E-26 T 26-04-2016 PAM18_RS19730 93cbbfc2387d81fcbdd27bc22c2e4f05 198 PANTHER PTHR30333:SF1 1 198 4.7E-118 T 26-04-2016 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 1.7E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 Gene3D G3DSA:3.40.190.10 182 248 2.0E-6 T 26-04-2016 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 Pfam PF03466 LysR substrate binding domain 90 290 1.5E-30 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 SUPERFAMILY SSF53850 91 292 2.33E-31 T 26-04-2016 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 Gene3D G3DSA:1.10.10.10 2 82 2.4E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 PANTHER PTHR30419:SF11 1 293 5.8E-187 T 26-04-2016 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-6 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 SUPERFAMILY SSF46785 2 85 6.81E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 Gene3D G3DSA:3.40.190.10 109 181 3.1E-12 T 26-04-2016 PAM18_RS26105 32c6f38bf9e45d0475927a7ac326810a 294 PANTHER PTHR30419 1 293 5.8E-187 T 26-04-2016 PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 125 267 3.6E-40 T 26-04-2016 PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 1.0E-55 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 6.2E-85 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 SUPERFAMILY SSF54506 2 277 2.27E-67 T 26-04-2016 PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 PIRSF PIRSF016184 1 278 1.5E-81 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 PANTHER PTHR13774 1 276 3.2E-111 T 26-04-2016 PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 PANTHER PTHR13774:SF18 1 276 3.2E-111 T 26-04-2016 PAM18_RS03695 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 2 124 7.2E-41 T 26-04-2016 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 Gene3D G3DSA:3.40.1780.10 1 62 1.1E-102 T 26-04-2016 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 Gene3D G3DSA:3.40.1780.10 175 337 1.1E-102 T 26-04-2016 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 PANTHER PTHR30307 2 343 4.7E-184 T 26-04-2016 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 Pfam PF02547 Queuosine biosynthesis protein 4 336 2.7E-135 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 SUPERFAMILY SSF111337 1 336 2.09E-137 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 47.897 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 1.7E-148 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 PANTHER PTHR30307:SF0 2 343 4.7E-184 T 26-04-2016 PAM18_RS05655 30cf358b51d182846fe6968e7f63b91b 347 Gene3D G3DSA:2.40.10.240 64 130 2.1E-16 T 26-04-2016 PAM18_RS15830 bc4b1eb89b6fbd1a63ebf982d54da7cb 175 SUPERFAMILY SSF52540 2 169 2.3E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS15830 bc4b1eb89b6fbd1a63ebf982d54da7cb 175 Pfam PF13521 AAA domain 5 160 6.5E-31 T 26-04-2016 PAM18_RS15830 bc4b1eb89b6fbd1a63ebf982d54da7cb 175 PANTHER PTHR37512 1 175 1.5E-98 T 26-04-2016 PAM18_RS15830 bc4b1eb89b6fbd1a63ebf982d54da7cb 175 Gene3D G3DSA:3.40.50.300 1 165 3.1E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06820 79f1c63b72b356a023f3cb1969514402 251 SUPERFAMILY SSF51306 109 243 9.03E-22 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C PAM18_RS06820 79f1c63b72b356a023f3cb1969514402 251 Pfam PF00717 Peptidase S24-like 158 225 2.0E-11 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B PAM18_RS06820 79f1c63b72b356a023f3cb1969514402 251 PANTHER PTHR40661 24 250 5.1E-32 T 26-04-2016 PAM18_RS06820 79f1c63b72b356a023f3cb1969514402 251 Gene3D G3DSA:2.10.109.10 111 242 2.8E-14 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain PAM18_RS15275 ac427f81ea7b440a8e5b3bdfaf4043a8 212 PANTHER PTHR30336:SF5 5 212 5.8E-78 T 26-04-2016 PAM18_RS15275 ac427f81ea7b440a8e5b3bdfaf4043a8 212 Pfam PF02698 DUF218 domain 27 131 1.4E-14 T 26-04-2016 IPR003848 Domain of unknown function DUF218 PAM18_RS15275 ac427f81ea7b440a8e5b3bdfaf4043a8 212 Gene3D G3DSA:3.40.50.620 23 137 7.3E-23 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS15275 ac427f81ea7b440a8e5b3bdfaf4043a8 212 PANTHER PTHR30336 5 212 5.8E-78 T 26-04-2016 PAM18_RS11535 5cb0987ab6e70d9d6bd5bce78972b02c 275 PANTHER PTHR32552 1 262 5.7E-73 T 26-04-2016 PAM18_RS11535 5cb0987ab6e70d9d6bd5bce78972b02c 275 SUPERFAMILY SSF53098 101 263 8.85E-42 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS11535 5cb0987ab6e70d9d6bd5bce78972b02c 275 Gene3D G3DSA:3.30.420.10 102 262 5.0E-39 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS11535 5cb0987ab6e70d9d6bd5bce78972b02c 275 Pfam PF00665 Integrase core domain 108 223 4.1E-32 T 26-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PAM18_RS11535 5cb0987ab6e70d9d6bd5bce78972b02c 275 Pfam PF13276 HTH-like domain 31 83 1.8E-13 T 26-04-2016 IPR025948 HTH-like domain PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 Gene3D G3DSA:1.20.1250.20 222 396 1.6E-22 T 26-04-2016 PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 Gene3D G3DSA:1.20.1250.20 18 198 6.0E-39 T 26-04-2016 PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 PANTHER PTHR23510:SF6 12 404 5.6E-247 T 26-04-2016 PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 Pfam PF07690 Major Facilitator Superfamily 21 358 3.9E-46 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 PANTHER PTHR23510 12 404 5.6E-247 T 26-04-2016 PAM18_RS03575 8958da8d76572fd50d2c39f5842afd04 462 SUPERFAMILY SSF103473 14 395 3.4E-69 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF52172 4 128 8.25E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00862 147 223 3.5E-16 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:1.10.10.10 125 223 3.9E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF46894 123 223 1.02E-21 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:3.40.50.2300 3 124 5.7E-39 T 26-04-2016 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 4.6E-16 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 PANTHER PTHR26402:SF476 2 223 2.5E-108 T 26-04-2016 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00448 2 113 1.3E-38 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS09060 5c23d62536a0f573f9e3b6cd54c64c34 225 PANTHER PTHR26402 2 223 2.5E-108 T 26-04-2016 PAM18_RS04835 baf73e7157e84b82880d29f8b1010246 207 Pfam PF04390 Lipopolysaccharide-assembly 13 156 4.3E-15 T 26-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PAM18_RS04835 baf73e7157e84b82880d29f8b1010246 207 PANTHER PTHR38098:SF1 1 204 2.6E-69 T 26-04-2016 PAM18_RS04835 baf73e7157e84b82880d29f8b1010246 207 PANTHER PTHR38098 1 204 2.6E-69 T 26-04-2016 PAM18_RS04835 baf73e7157e84b82880d29f8b1010246 207 Gene3D G3DSA:3.30.160.150 20 167 3.6E-31 T 26-04-2016 PAM18_RS04835 baf73e7157e84b82880d29f8b1010246 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 161 23.219 T 26-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 PANTHER PTHR10072:SF48 1 107 2.1E-50 T 26-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.4E-24 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 SUPERFAMILY SSF89360 1 96 1.83E-31 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 Gene3D G3DSA:2.60.300.12 2 96 9.7E-34 T 26-04-2016 IPR000361 FeS cluster biogenesis PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 PANTHER PTHR10072 1 107 2.1E-50 T 26-04-2016 PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.3E-35 T 26-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 26-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site PAM18_RS05715 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-53 T 26-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 Gene3D G3DSA:1.20.1250.20 251 425 2.9E-20 T 26-04-2016 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 Gene3D G3DSA:1.20.1250.20 19 199 6.3E-30 T 26-04-2016 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 PANTHER PTHR24064:SF234 29 423 1.2E-67 T 26-04-2016 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 Pfam PF07690 Major Facilitator Superfamily 28 286 5.0E-30 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 PANTHER PTHR24064 29 423 1.2E-67 T 26-04-2016 PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 SUPERFAMILY SSF103473 9 430 2.09E-75 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS25645 c7322ceef3e6dfc46044dcd2912bab21 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS12900 fefc6df8b97529817ca33a3dae8e0d8c 311 Pfam PF01148 Cytidylyltransferase family 43 307 2.4E-68 T 26-04-2016 PAM18_RS12900 fefc6df8b97529817ca33a3dae8e0d8c 311 PANTHER PTHR13773:SF11 25 308 1.6E-139 T 26-04-2016 PAM18_RS12900 fefc6df8b97529817ca33a3dae8e0d8c 311 PANTHER PTHR13773 25 308 1.6E-139 T 26-04-2016 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 26-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PANTHER PTHR19139:SF103 1 229 5.6E-75 T 26-04-2016 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 34.914 T 26-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.0E-57 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 Pfam PF00230 Major intrinsic protein 2 221 9.7E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 SUPERFAMILY SSF81338 1 225 3.66E-66 T 26-04-2016 IPR023271 Aquaporin-like PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 1.2E-50 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 PANTHER PTHR19139 1 229 5.6E-75 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 PAM18_RS04610 362907f93f8c198cbc6794777f346a85 229 Gene3D G3DSA:1.20.1080.10 1 225 1.2E-66 T 26-04-2016 IPR023271 Aquaporin-like PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 SUPERFAMILY SSF56219 28 277 1.23E-33 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 Gene3D G3DSA:3.60.10.10 34 271 1.2E-8 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 PANTHER PTHR14859:SF0 18 54 1.2E-48 T 26-04-2016 PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 PANTHER PTHR14859:SF0 71 292 1.2E-48 T 26-04-2016 PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 PANTHER PTHR14859 18 54 1.2E-48 T 26-04-2016 IPR027317 PGAP2-interacting protein PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 PANTHER PTHR14859 71 292 1.2E-48 T 26-04-2016 IPR027317 PGAP2-interacting protein PAM18_RS28670 810dac3a7fe294d9c8fd1163761250c9 292 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 264 2.1E-17 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PANTHER PTHR11080:SF4 7 207 1.6E-117 T 26-04-2016 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PIRSF PIRSF001111 2 207 6.8E-94 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 Pfam PF00857 Isochorismatase family 33 204 1.4E-34 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 SUPERFAMILY SSF52499 3 207 2.49E-61 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PANTHER PTHR11080 7 207 1.6E-117 T 26-04-2016 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 Gene3D G3DSA:3.40.50.850 4 206 3.0E-59 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 79 98 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 3 15 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 185 202 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 111 133 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 167 185 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS03705 e84ec764604a1375450f999d308c99ac 207 PRINTS PR01398 Isochorismatase signature 62 79 4.1E-58 T 26-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 PAM18_RS10500 7396aea5c4d9111bbb8299c3e38b853c 197 Pfam PF01810 LysE type translocator 13 191 8.3E-19 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS10500 7396aea5c4d9111bbb8299c3e38b853c 197 PANTHER PTHR30086:SF12 1 191 2.7E-85 T 26-04-2016 PAM18_RS10500 7396aea5c4d9111bbb8299c3e38b853c 197 PANTHER PTHR30086 1 191 2.7E-85 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 SUPERFAMILY SSF53649 222 534 9.76E-47 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 Gene3D G3DSA:3.40.720.10 224 513 2.8E-28 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 Pfam PF00884 Sulfatase 224 501 1.4E-36 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 PANTHER PTHR10342 751 760 1.2E-67 T 26-04-2016 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 PANTHER PTHR10342 278 550 1.2E-67 T 26-04-2016 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 PANTHER PTHR10342:SF237 751 760 1.2E-67 T 26-04-2016 PAM18_RS20005 8df6c76470c7ea553c3fe0997492cc67 774 PANTHER PTHR10342:SF237 278 550 1.2E-67 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 SUPERFAMILY SSF81901 256 449 7.19E-19 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 Gene3D G3DSA:1.25.40.10 36 145 3.1E-9 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 Gene3D G3DSA:1.25.40.10 177 432 2.0E-26 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102 253 268 1.0E-65 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102 292 453 1.0E-65 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102 34 165 1.0E-65 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 SMART SM00671 62 96 26.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 SMART SM00671 345 380 1.7E-4 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 SMART SM00671 381 416 3.3 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 SMART SM00671 310 344 0.018 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102:SF11 253 268 1.0E-65 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102:SF11 292 453 1.0E-65 T 26-04-2016 PAM18_RS07430 f3f871a91ce8cd84509e60fb4fe39193 475 PANTHER PTHR11102:SF11 34 165 1.0E-65 T 26-04-2016 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 373 381 - T 26-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 SUPERFAMILY SSF56634 21 551 4.19E-223 T 26-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 Pfam PF01965 DJ-1/PfpI family 558 665 5.7E-12 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PIRSF PIRSF038927 1 707 0.0 T 26-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 159 177 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 140 157 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 360 386 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 119 137 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 56 79 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PRINTS PR00067 Catalase signature 328 355 7.0E-70 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 SUPERFAMILY SSF52317 555 683 5.89E-20 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 Pfam PF00199 Catalase 44 428 4.4E-180 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 Pfam PF06628 Catalase-related immune-responsive 461 524 2.9E-20 T 26-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PANTHER PTHR11465 22 591 0.0 T 26-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 ProSitePatterns PS00438 Catalase proximal active site signature. 79 95 - T 26-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 SMART SM01060 43 431 3.8E-276 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 Gene3D G3DSA:3.40.50.880 557 709 3.5E-47 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 PANTHER PTHR11465:SF7 22 591 0.0 T 26-04-2016 PAM18_RS14845 6eef6a9b129cd85136189ebd5220a3a6 709 Gene3D G3DSA:2.40.180.10 24 398 2.6E-180 T 26-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 SUPERFAMILY SSF56042 172 338 7.18E-62 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 336 3.7E-142 T 26-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 Gene3D G3DSA:3.30.1330.10 23 171 8.8E-61 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 Gene3D G3DSA:3.90.650.10 172 340 4.5E-66 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 SUPERFAMILY SSF55326 8 171 2.09E-51 T 26-04-2016 PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 PANTHER PTHR10520 8 350 2.3E-217 T 26-04-2016 PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 347 45.621 T 26-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 3.0E-15 T 26-04-2016 IPR016188 PurM-like, N-terminal domain PAM18_RS20895 1f25e5cb5b311a10b217bdc3b735d351 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 337 7.5E-39 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 322 1.7E-57 T 26-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 PIRSF PIRSF026782 9 366 4.4E-123 T 26-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 SUPERFAMILY SSF111342 6 288 3.92E-83 T 26-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 Pfam PF01888 CbiD 12 271 2.5E-89 T 26-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 PANTHER PTHR35863:SF1 1 360 1.4E-121 T 26-04-2016 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 PANTHER PTHR35863 1 360 1.4E-121 T 26-04-2016 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 27.631 T 26-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 PAM18_RS10540 5363e5c6265279cc46b14d85c36e92ef 366 Gene3D G3DSA:3.30.2110.10 14 186 1.6E-56 T 26-04-2016 PAM18_RS15390 3abddc0d0462e40e55a8fcc7c29f25b0 300 PANTHER PTHR11079 11 300 3.2E-114 T 26-04-2016 PAM18_RS15390 3abddc0d0462e40e55a8fcc7c29f25b0 300 SUPERFAMILY SSF55120 82 298 3.29E-50 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS15390 3abddc0d0462e40e55a8fcc7c29f25b0 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS15390 3abddc0d0462e40e55a8fcc7c29f25b0 300 Pfam PF00849 RNA pseudouridylate synthase 95 242 6.0E-22 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PAM18_RS15390 3abddc0d0462e40e55a8fcc7c29f25b0 300 PANTHER PTHR11079:SF61 11 300 3.2E-114 T 26-04-2016 PAM18_RS20395 8a0a22167c17646ade73e12f24b0da86 452 Pfam PF02447 GntP family permease 1 450 3.2E-96 T 26-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PAM18_RS20395 8a0a22167c17646ade73e12f24b0da86 452 PANTHER PTHR30354 1 452 3.3E-273 T 26-04-2016 PAM18_RS20395 8a0a22167c17646ade73e12f24b0da86 452 PANTHER PTHR30354:SF3 1 452 3.3E-273 T 26-04-2016 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 SUPERFAMILY SSF103481 50 151 3.14E-17 T 26-04-2016 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 PANTHER PTHR22911:SF6 6 296 5.0E-60 T 26-04-2016 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 PANTHER PTHR22911 6 296 5.0E-60 T 26-04-2016 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 SUPERFAMILY SSF103481 190 290 6.41E-13 T 26-04-2016 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 Pfam PF00892 EamA-like transporter family 17 147 8.2E-20 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS12055 2cc39635d965a1b598a7e881db64ed71 296 Pfam PF00892 EamA-like transporter family 158 283 1.8E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 PANTHER PTHR11700 1 102 1.8E-54 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 Gene3D G3DSA:3.30.70.600 3 102 9.4E-44 T 26-04-2016 IPR027486 Ribosomal protein S10 domain PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.3E-46 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.007 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 26-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 26-04-2016 IPR027486 Ribosomal protein S10 domain PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 SUPERFAMILY SSF54999 6 101 1.12E-36 T 26-04-2016 IPR027486 Ribosomal protein S10 domain PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.7E-18 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.7E-18 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.7E-18 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03420 84d268ba9f127038231991402a4d5e4b 103 SMART SM01403 7 101 9.7E-56 T 26-04-2016 IPR027486 Ribosomal protein S10 domain PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.1E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.1E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 Gene3D G3DSA:1.10.357.10 7 158 3.6E-19 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 SUPERFAMILY SSF46689 11 82 1.59E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 PANTHER PTHR30055:SF92 4 216 3.2E-53 T 26-04-2016 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 8.1E-9 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS01470 40e40ebdba3f725b634a2f4b9e75d29c 221 PANTHER PTHR30055 4 216 3.2E-53 T 26-04-2016 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 PANTHER PTHR21058 1 157 2.4E-74 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 30.962 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 8.4E-54 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 Gene3D G3DSA:3.40.50.960 5 156 5.3E-64 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 2.4E-55 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS04515 bdabc59ef86cebeec4adebf4aa60e3a6 158 SUPERFAMILY SSF52121 5 155 7.2E-61 T 26-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 PAM18_RS08380 12c7720a30e28de54656955779d0fb81 79 Pfam PF00550 Phosphopantetheine attachment site 9 72 1.1E-7 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08380 12c7720a30e28de54656955779d0fb81 79 Gene3D G3DSA:1.10.1200.10 3 76 3.6E-15 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS08380 12c7720a30e28de54656955779d0fb81 79 SUPERFAMILY SSF47336 3 77 3.01E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 Pfam PF16344 Domain of unknown function (DUF4974) 233 315 2.6E-9 T 26-04-2016 IPR032508 Protein FecR, C-terminal PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 Pfam PF04773 FecR protein 126 215 1.7E-18 T 26-04-2016 IPR006860 FecR protein PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 PANTHER PTHR30273 8 331 3.2E-94 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 PANTHER PTHR30273:SF2 8 331 3.2E-94 T 26-04-2016 PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 Pfam PF16220 Domain of unknown function (DUF4880) 18 58 1.0E-11 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS00760 2f47103c1dfb171640f45046c177b961 331 PIRSF PIRSF018266 6 331 8.6E-87 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 Gene3D G3DSA:3.30.420.140 10 142 2.1E-44 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 24.793 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 2.6E-40 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 SUPERFAMILY SSF53098 9 141 1.82E-40 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 Pfam PF03652 Holliday junction resolvase 10 140 5.9E-40 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 SMART SM00732 8 108 8.0E-40 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 PAM18_RS02045 03f54e8ad2c3ca7591e29e80f0565cff 144 PANTHER PTHR33317 10 139 1.1E-40 T 26-04-2016 PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 SUPERFAMILY SSF52467 306 478 6.27E-75 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 PIRSF PIRSF000204 1 478 2.7E-217 T 26-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 PANTHER PTHR10160:SF24 3 477 1.6E-226 T 26-04-2016 PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 PANTHER PTHR10160 3 477 1.6E-226 T 26-04-2016 PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 475 1.5E-186 T 26-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PAM18_RS00995 947f5aad2cd3bd2b2cabd967fb434c82 478 Gene3D G3DSA:3.40.50.1220 302 478 2.1E-86 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 SUPERFAMILY SSF52317 7 183 1.1E-43 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 Gene3D G3DSA:3.40.50.880 3 184 1.4E-50 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 184 7.2E-66 T 26-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 PANTHER PTHR11019 13 179 2.1E-60 T 26-04-2016 PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 PANTHER PTHR11019:SF115 13 179 2.1E-60 T 26-04-2016 PAM18_RS03915 2ffefc53bcc390999a93c965b5317c86 187 Pfam PF01965 DJ-1/PfpI family 8 180 5.2E-39 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 Pfam PF13523 Acetyltransferase (GNAT) domain 170 315 1.1E-54 T 26-04-2016 PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 PANTHER PTHR31438:SF1 140 337 2.2E-81 T 26-04-2016 PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 SUPERFAMILY SSF55729 135 329 3.07E-63 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 SMART SM01006 167 214 3.5E-21 T 26-04-2016 IPR019432 Siderophore biosynthesis protein, conserved domain PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 PANTHER PTHR31438 140 337 2.2E-81 T 26-04-2016 PAM18_RS13420 a55c51bce40d3ca3b9b07544c65a52e8 337 Gene3D G3DSA:3.40.630.30 145 335 1.4E-70 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 Pfam PF01979 Amidohydrolase family 12 310 3.0E-14 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 26-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 6.5E-141 T 26-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 26-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 PANTHER PTHR11647 1 318 1.7E-167 T 26-04-2016 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 SUPERFAMILY SSF51556 3 343 1.17E-146 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 PANTHER PTHR11647:SF59 1 318 1.7E-167 T 26-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 PIRSF PIRSF001237 1 346 5.9E-140 T 26-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.966 T 26-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 PAM18_RS07510 30510ea90a7660f2ccaa53b69c1abfed 348 Gene3D G3DSA:3.20.20.140 2 343 3.3E-135 T 26-04-2016 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 SMART SM00342 178 260 9.7E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 Gene3D G3DSA:1.10.10.60 216 259 7.4E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 Pfam PF02311 AraC-like ligand binding domain 35 128 3.3E-7 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 PANTHER PTHR11019 12 263 5.2E-123 T 26-04-2016 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 Gene3D G3DSA:1.10.10.60 157 215 9.1E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 SUPERFAMILY SSF46689 215 261 2.42E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 PANTHER PTHR11019:SF98 12 263 5.2E-123 T 26-04-2016 PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 SUPERFAMILY SSF51182 10 187 8.0E-18 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 Gene3D G3DSA:2.60.120.10 19 93 8.7E-9 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS00825 a2cd8104e0a1cecdcefacf1ba988ce77 263 Pfam PF12833 Helix-turn-helix domain 184 261 6.6E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21385 0feb2ffc39b198d6a70e1878031e434a 207 PANTHER PTHR10204:SF40 16 203 1.9E-107 T 26-04-2016 PAM18_RS21385 0feb2ffc39b198d6a70e1878031e434a 207 PANTHER PTHR10204 16 203 1.9E-107 T 26-04-2016 PAM18_RS21385 0feb2ffc39b198d6a70e1878031e434a 207 Pfam PF02525 Flavodoxin-like fold 17 202 6.2E-31 T 26-04-2016 IPR003680 Flavodoxin-like fold PAM18_RS21385 0feb2ffc39b198d6a70e1878031e434a 207 Gene3D G3DSA:3.40.50.360 17 206 6.4E-39 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS21385 0feb2ffc39b198d6a70e1878031e434a 207 SUPERFAMILY SSF52218 17 207 2.1E-43 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 139 181 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 87 131 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 Gene3D G3DSA:1.10.10.60 140 188 3.6E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 SUPERFAMILY SSF46689 86 136 7.18E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 Gene3D G3DSA:1.10.10.60 83 139 1.8E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 PANTHER PTHR11019:SF139 3 193 6.4E-55 T 26-04-2016 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 SMART SM00342 102 185 3.7E-26 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 Pfam PF12833 Helix-turn-helix domain 108 186 6.0E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 SUPERFAMILY SSF46689 138 186 9.41E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS11700 c2a108647bb8e7b5f8ad01ff850e21ba 196 PANTHER PTHR11019 3 193 6.4E-55 T 26-04-2016 PAM18_RS14735 df3430516cecdcef96730840808c9639 150 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 10 146 2.4E-46 T 26-04-2016 IPR011971 Conserved hypothetical protein CHP02284 PAM18_RS14735 df3430516cecdcef96730840808c9639 150 PIRSF PIRSF029477 1 150 1.3E-73 T 26-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 PAM18_RS14735 df3430516cecdcef96730840808c9639 150 SUPERFAMILY SSF47240 8 148 5.41E-8 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS14735 df3430516cecdcef96730840808c9639 150 Pfam PF09537 Domain of unknown function (DUF2383) 9 118 4.8E-40 T 26-04-2016 IPR019052 Domain of unknown function DUF2383 PAM18_RS14735 df3430516cecdcef96730840808c9639 150 Gene3D G3DSA:1.20.1260.10 7 145 5.5E-7 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS02420 5c19085198b925bdaff593a60d4ab21e 158 Gene3D G3DSA:3.40.630.30 1 158 1.6E-61 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS02420 5c19085198b925bdaff593a60d4ab21e 158 Pfam PF00583 Acetyltransferase (GNAT) family 59 136 1.3E-16 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS02420 5c19085198b925bdaff593a60d4ab21e 158 SUPERFAMILY SSF55729 3 152 5.57E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS02420 5c19085198b925bdaff593a60d4ab21e 158 PANTHER PTHR10545 1 158 7.7E-62 T 26-04-2016 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 PANTHER PTHR32438:SF5 147 682 1.5E-159 T 26-04-2016 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 Gene3D G3DSA:3.20.20.80 148 664 1.2E-149 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 PANTHER PTHR32438 147 682 1.5E-159 T 26-04-2016 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 Pfam PF02446 4-alpha-glucanotransferase 156 652 1.3E-103 T 26-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 116 672 3.9E-86 T 26-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PAM18_RS14765 5f9a99ae155aeda7b54c52e1a7f3fe62 684 SUPERFAMILY SSF51445 143 671 1.36E-130 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 PANTHER PTHR18964:SF141 13 144 1.6E-46 T 26-04-2016 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 SMART SM00347 28 128 9.2E-30 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 Gene3D G3DSA:1.10.10.10 9 139 6.6E-36 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 PANTHER PTHR18964 13 144 1.6E-46 T 26-04-2016 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 SUPERFAMILY SSF46785 6 138 1.67E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 9.7E-7 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 9.7E-7 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 9.7E-7 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS02145 eef0b1b6d32357b2a7283ec9a954393f 147 Pfam PF01047 MarR family 35 92 8.9E-17 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 PANTHER PTHR24220:SF10 12 235 8.6E-101 T 26-04-2016 PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 SUPERFAMILY SSF52540 11 243 6.96E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 PANTHER PTHR24220 12 235 8.6E-101 T 26-04-2016 PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 Gene3D G3DSA:3.40.50.300 9 225 6.5E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 Pfam PF00005 ABC transporter 31 169 2.5E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS14115 7d719a6c0584f5671402aa5579998d14 284 SMART SM00382 39 220 2.1E-19 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PIRSF PIRSF001365 3 301 1.4E-75 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 Gene3D G3DSA:3.20.20.70 5 293 1.8E-86 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.2E-9 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.2E-9 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.2E-9 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PANTHER PTHR12128 3 293 7.1E-98 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 4.6E-59 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 SMART SM01130 6 294 5.4E-86 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 SUPERFAMILY SSF51569 3 292 4.5E-80 T 26-04-2016 PAM18_RS19315 8e2efb2fd6fad49c914752e400d2f110 305 PANTHER PTHR12128:SF15 3 293 7.1E-98 T 26-04-2016 PAM18_RS14525 eafaa713639e8c8990689213e8a8a3a7 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 439 5.4E-136 T 26-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane PAM18_RS14525 eafaa713639e8c8990689213e8a8a3a7 506 PANTHER PTHR35342 2 504 0.0 T 26-04-2016 PAM18_RS14525 eafaa713639e8c8990689213e8a8a3a7 506 PANTHER PTHR35342:SF1 2 504 0.0 T 26-04-2016 PAM18_RS21330 b51740608c3175659e87b24df3f67bb0 57 TIGRFAM TIGR03510 XapX: XapX domain 2 48 6.0E-21 T 26-04-2016 IPR020017 XapX domain PAM18_RS21330 b51740608c3175659e87b24df3f67bb0 57 Pfam PF07235 Protein of unknown function (DUF1427) 2 54 1.2E-22 T 26-04-2016 IPR009872 Protein of unknown function DUF1427 PAM18_RS08390 13a30251f42851b2048a555a0b901fc9 141 Gene3D G3DSA:3.10.450.50 2 138 4.3E-53 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS08390 13a30251f42851b2048a555a0b901fc9 141 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 25 129 2.0E-4 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS08390 13a30251f42851b2048a555a0b901fc9 141 SUPERFAMILY SSF54427 1 129 1.62E-38 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS08390 13a30251f42851b2048a555a0b901fc9 141 Pfam PF12680 SnoaL-like domain 11 112 5.6E-12 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 245 6.4E-76 T 26-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 PANTHER PTHR12029 4 183 9.6E-42 T 26-04-2016 PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 SUPERFAMILY SSF75217 4 170 1.18E-38 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 PIRSF PIRSF004808 1 251 1.8E-72 T 26-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Gene3D G3DSA:3.40.1280.10 3 161 4.3E-34 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAM18_RS05690 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Pfam PF00588 SpoU rRNA Methylase family 5 155 3.0E-34 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 Pfam PF00364 Biotin-requiring enzyme 5 78 1.4E-14 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 4.4E-9 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 4.4E-9 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 4.4E-9 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 PANTHER PTHR23151 12 79 7.5E-13 T 26-04-2016 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 Gene3D G3DSA:2.40.50.100 3 78 4.0E-22 T 26-04-2016 PAM18_RS02495 4d3e4bdcede3d43838fc175077643249 82 SUPERFAMILY SSF51230 5 78 3.66E-18 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS20145 5570bbea4451e21705bcef84ce03e2f2 538 PANTHER PTHR10277 12 248 1.0E-22 T 26-04-2016 PAM18_RS20145 5570bbea4451e21705bcef84ce03e2f2 538 Pfam PF00682 HMGL-like 11 253 5.7E-24 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 PAM18_RS20145 5570bbea4451e21705bcef84ce03e2f2 538 Gene3D G3DSA:3.20.20.70 11 253 1.4E-34 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS20145 5570bbea4451e21705bcef84ce03e2f2 538 SUPERFAMILY SSF51569 11 274 1.54E-44 T 26-04-2016 PAM18_RS20145 5570bbea4451e21705bcef84ce03e2f2 538 PANTHER PTHR10277:SF3 12 248 1.0E-22 T 26-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 PAM18_RS08520 9e214ea76641e2b92c343055984ae342 200 PANTHER PTHR31573:SF1 11 200 4.9E-85 T 26-04-2016 PAM18_RS08520 9e214ea76641e2b92c343055984ae342 200 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 16 194 7.3E-35 T 26-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PAM18_RS08520 9e214ea76641e2b92c343055984ae342 200 Gene3D G3DSA:2.60.120.590 15 198 3.1E-39 T 26-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PAM18_RS08520 9e214ea76641e2b92c343055984ae342 200 SUPERFAMILY SSF51197 8 198 2.47E-63 T 26-04-2016 PAM18_RS08520 9e214ea76641e2b92c343055984ae342 200 PANTHER PTHR31573 11 200 4.9E-85 T 26-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 Gene3D G3DSA:3.10.129.10 14 134 1.0E-37 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 Pfam PF03061 Thioesterase superfamily 46 120 3.3E-15 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 PANTHER PTHR12418:SF30 9 134 2.1E-60 T 26-04-2016 PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 SUPERFAMILY SSF54637 2 133 9.61E-27 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 PANTHER PTHR12418 9 134 2.1E-60 T 26-04-2016 PAM18_RS20830 e592c886509a5638cc18f50471e54688 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 132 2.6E-14 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 PANTHER PTHR12735 2 98 6.3E-36 T 26-04-2016 PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 SUPERFAMILY SSF82657 3 83 4.32E-28 T 26-04-2016 IPR002634 BolA protein PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 PIRSF PIRSF003113 1 94 3.1E-29 T 26-04-2016 IPR002634 BolA protein PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 PANTHER PTHR12735:SF3 2 98 6.3E-36 T 26-04-2016 PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 Pfam PF01722 BolA-like protein 13 80 1.5E-23 T 26-04-2016 IPR002634 BolA protein PAM18_RS21365 32f1fb27077194a7decd2146bcac03e6 101 Gene3D G3DSA:3.30.300.90 1 96 1.7E-28 T 26-04-2016 IPR002634 BolA protein PAM18_RS11615 d2c298e5b5db5ef5cf451f2ae39e415b 159 Gene3D G3DSA:1.10.10.10 2 114 2.0E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11615 d2c298e5b5db5ef5cf451f2ae39e415b 159 SUPERFAMILY SSF46785 7 145 3.89E-43 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11615 d2c298e5b5db5ef5cf451f2ae39e415b 159 PANTHER PTHR33204 1 155 2.7E-111 T 26-04-2016 PAM18_RS11615 d2c298e5b5db5ef5cf451f2ae39e415b 159 Pfam PF01638 HxlR-like helix-turn-helix 19 106 1.6E-24 T 26-04-2016 IPR002577 Helix-turn-helix, HxlR type PAM18_RS11615 d2c298e5b5db5ef5cf451f2ae39e415b 159 PANTHER PTHR33204:SF14 1 155 2.7E-111 T 26-04-2016 PAM18_RS15600 fde449868abc0f2894e1a21cdef1b356 474 PANTHER PTHR41983 3 462 0.0 T 26-04-2016 PAM18_RS15600 fde449868abc0f2894e1a21cdef1b356 474 PANTHER PTHR41983:SF1 3 462 0.0 T 26-04-2016 PAM18_RS15600 fde449868abc0f2894e1a21cdef1b356 474 Pfam PF02667 Short chain fatty acid transporter 14 458 5.5E-83 T 26-04-2016 IPR006160 Short chain fatty acid transporter AtoE PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 Gene3D G3DSA:3.40.630.30 7 81 1.5E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 Gene3D G3DSA:3.40.630.30 126 192 1.5E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 Pfam PF00583 Acetyltransferase (GNAT) family 127 185 6.7E-10 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 PANTHER PTHR23091:SF240 123 190 9.9E-52 T 26-04-2016 PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 PANTHER PTHR23091:SF240 1 85 9.9E-52 T 26-04-2016 PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 SUPERFAMILY SSF55729 8 199 1.99E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 PANTHER PTHR23091 123 190 9.9E-52 T 26-04-2016 PAM18_RS12860 5f2b7ff3d41d89d085b3688f83063556 210 PANTHER PTHR23091 1 85 9.9E-52 T 26-04-2016 PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 PANTHER PTHR24220 22 267 4.9E-171 T 26-04-2016 PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 PANTHER PTHR24220:SF365 22 267 4.9E-171 T 26-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 SUPERFAMILY SSF52540 21 222 1.93E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 Gene3D G3DSA:3.40.50.300 20 220 1.2E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 Pfam PF00005 ABC transporter 36 169 4.6E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS07830 57e4232105ca1cf6258a1b5c476c3e13 274 SMART SM00382 45 219 5.3E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS19885 4c215388a939419c370a90d028d173dd 282 PANTHER PTHR31157 1 282 5.4E-84 T 26-04-2016 PAM18_RS19885 4c215388a939419c370a90d028d173dd 282 PANTHER PTHR31157:SF1 1 282 5.4E-84 T 26-04-2016 PAM18_RS19885 4c215388a939419c370a90d028d173dd 282 Pfam PF00188 Cysteine-rich secretory protein family 152 279 4.0E-20 T 26-04-2016 IPR014044 CAP domain PAM18_RS19885 4c215388a939419c370a90d028d173dd 282 Gene3D G3DSA:3.40.33.10 145 280 2.1E-12 T 26-04-2016 IPR014044 CAP domain PAM18_RS19885 4c215388a939419c370a90d028d173dd 282 SUPERFAMILY SSF55797 145 280 2.09E-22 T 26-04-2016 IPR014044 CAP domain PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 SUPERFAMILY SSF53067 101 313 4.09E-43 T 26-04-2016 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 1.1E-117 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.348 T 26-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 5.8E-133 T 26-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 Pfam PF00814 Glycoprotease family 24 311 8.9E-101 T 26-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PANTHER PTHR11735:SF6 1 340 1.4E-166 T 26-04-2016 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PANTHER PTHR11735 1 340 1.4E-166 T 26-04-2016 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.41E-51 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 Gene3D G3DSA:3.30.420.40 1 159 8.6E-52 T 26-04-2016 PAM18_RS02940 45aa42e5c761087b65ea25975b709c03 341 SUPERFAMILY SSF53067 3 122 2.98E-32 T 26-04-2016 PAM18_RS08735 6e6150c05bf67a22a9655f183700a548 104 PANTHER PTHR30561 1 103 2.2E-50 T 26-04-2016 PAM18_RS08735 6e6150c05bf67a22a9655f183700a548 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.3E-28 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS08735 6e6150c05bf67a22a9655f183700a548 104 PANTHER PTHR30561:SF0 1 103 2.2E-50 T 26-04-2016 PAM18_RS08735 6e6150c05bf67a22a9655f183700a548 104 SUPERFAMILY SSF103481 5 103 2.35E-19 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 SMART SM00283 279 540 2.5E-77 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PANTHER PTHR32089:SF64 46 158 1.2E-129 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PANTHER PTHR32089:SF64 186 541 1.2E-129 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.5E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 8.5E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 8.5E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.5E-23 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 184 4.2E-21 T 26-04-2016 IPR024478 4HB MCP domain PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 SMART SM00304 267 317 72.0 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 SMART SM00304 212 264 2.0E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 539 1.4E-49 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PANTHER PTHR32089 46 158 1.2E-129 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 PANTHER PTHR32089 186 541 1.2E-129 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 SUPERFAMILY SSF58104 232 540 6.15E-74 T 26-04-2016 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 Pfam PF00672 HAMP domain 193 260 1.1E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19330 653aa2f4671bf810c8fef84132794f67 541 Gene3D G3DSA:1.10.287.950 294 511 2.2E-57 T 26-04-2016 PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 Gene3D G3DSA:3.30.70.270 102 259 1.6E-52 T 26-04-2016 PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 97 259 4.9E-49 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 SUPERFAMILY SSF55073 105 259 1.02E-45 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 Pfam PF00990 Diguanylate cyclase, GGDEF domain 101 255 6.3E-45 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 PANTHER PTHR10799:SF710 133 255 4.9E-20 T 26-04-2016 PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 SMART SM00267 89 260 2.6E-56 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS00855 672f18d69867a468f86340a833e7224e 275 PANTHER PTHR10799 133 255 4.9E-20 T 26-04-2016 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 174 3.0E-37 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 79 7.5E-30 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 Gene3D G3DSA:3.10.20.80 10 84 1.3E-33 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 13 176 3.1E-65 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 SUPERFAMILY SSF55200 90 177 8.24E-33 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 Gene3D G3DSA:3.30.110.10 85 177 8.0E-40 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 PANTHER PTHR10938 2 177 3.7E-67 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 176 29.764 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 PAM18_RS11465 1578d73ecd7c84ba980d5f57db411d21 177 SUPERFAMILY SSF54364 11 84 3.27E-27 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 Gene3D G3DSA:1.10.10.10 1 135 4.5E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 PANTHER PTHR33221 2 152 1.6E-74 T 26-04-2016 PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 SUPERFAMILY SSF46785 2 132 1.82E-36 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 Pfam PF02082 Transcriptional regulator 1 83 8.0E-28 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 PANTHER PTHR33221:SF1 2 152 1.6E-74 T 26-04-2016 PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 5.7E-67 T 26-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 PAM18_RS05700 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.5E-47 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 Gene3D G3DSA:3.90.25.10 172 295 3.5E-21 T 26-04-2016 PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 PANTHER PTHR10366 4 304 3.6E-186 T 26-04-2016 PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 Pfam PF16363 GDP-mannose 4,6 dehydratase 36 291 5.6E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 PANTHER PTHR10366:SF325 4 304 3.6E-186 T 26-04-2016 PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 SUPERFAMILY SSF51735 4 299 1.75E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28500 d0b75c289870f6c1f35e2695b802ed6c 304 Gene3D G3DSA:3.40.50.720 5 171 8.0E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 Gene3D G3DSA:3.40.50.300 6 167 4.7E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 SMART SM00382 30 173 3.5E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 2.4E-12 T 26-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 PANTHER PTHR32039:SF10 5 305 1.1E-102 T 26-04-2016 PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 SUPERFAMILY SSF52540 6 283 9.34E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 PANTHER PTHR32039 5 305 1.1E-102 T 26-04-2016 PAM18_RS10370 556d76a3897fb6917c52d7680e244a6f 338 Gene3D G3DSA:1.10.8.80 216 284 1.1E-23 T 26-04-2016 PAM18_RS01030 374c1e9dc6765f860c948c86c1eeb042 293 PANTHER PTHR30201 1 290 2.7E-98 T 26-04-2016 PAM18_RS01030 374c1e9dc6765f860c948c86c1eeb042 293 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 293 150.318 T 26-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PAM18_RS01030 374c1e9dc6765f860c948c86c1eeb042 293 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 280 1.0E-71 T 26-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PAM18_RS01030 374c1e9dc6765f860c948c86c1eeb042 293 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 18 282 1.6E-98 T 26-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 PAM18_RS08295 65702ca0236538cbcd8e504e8d1e2da9 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 5 104 1.4E-26 T 26-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PAM18_RS08295 65702ca0236538cbcd8e504e8d1e2da9 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 49 102 1.3E-20 T 26-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal PAM18_RS08295 65702ca0236538cbcd8e504e8d1e2da9 107 SUPERFAMILY SSF101498 5 104 1.02E-19 T 26-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 127 4.3E-44 T 26-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 PANTHER PTHR34874:SF1 1 129 9.8E-58 T 26-04-2016 PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 PANTHER PTHR34874 1 129 9.8E-58 T 26-04-2016 PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 Pfam PF02635 DsrE/DsrF-like family 1 127 5.6E-24 T 26-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 Gene3D G3DSA:3.40.1260.10 1 127 2.5E-20 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS12170 5854b8ce97b2a22f82c53fd9ffc321f8 131 SUPERFAMILY SSF75169 1 127 1.86E-34 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS14130 93cf7258cb022214d559d143c1329e9b 452 PANTHER PTHR37944:SF1 2 452 3.0E-220 T 26-04-2016 PAM18_RS14130 93cf7258cb022214d559d143c1329e9b 452 PANTHER PTHR37944 2 452 3.0E-220 T 26-04-2016 PAM18_RS14130 93cf7258cb022214d559d143c1329e9b 452 Pfam PF04966 Carbohydrate-selective porin, OprB family 78 452 2.3E-119 T 26-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 Pfam PF04551 GcpE protein 13 352 7.1E-137 T 26-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 SUPERFAMILY SSF56014 265 352 3.27E-12 T 26-04-2016 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 PANTHER PTHR30454 1 369 2.2E-219 T 26-04-2016 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 SUPERFAMILY SSF51717 15 207 1.49E-10 T 26-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 5.3E-133 T 26-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 PIRSF PIRSF004640 1 362 7.8E-151 T 26-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 Gene3D G3DSA:3.20.20.70 32 132 4.9E-11 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS05760 92bc4b8aa9c363c34d095ae7e235cbe7 369 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.441 T 26-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PANTHER PTHR19375 9 334 2.6E-183 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 9 161 6.8E-47 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 9.2E-161 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.8E-65 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.8E-65 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.8E-65 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.8E-65 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.8E-65 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.90.640.10 189 260 3.5E-28 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 162 188 6.6E-34 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 265 319 6.6E-34 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 Pfam PF06723 MreB/Mbl protein 11 337 3.5E-148 T 26-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 9 150 3.02E-38 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 PANTHER PTHR19375:SF117 9 334 2.6E-183 T 26-04-2016 PAM18_RS23355 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 151 340 8.76E-48 T 26-04-2016 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 Gene3D G3DSA:3.40.50.2300 28 228 7.0E-69 T 26-04-2016 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 3.8E-52 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PANTHER PTHR30483:SF12 7 372 1.6E-177 T 26-04-2016 PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 SUPERFAMILY SSF53822 28 366 4.97E-100 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 Pfam PF13458 Periplasmic binding protein 29 364 2.1E-67 T 26-04-2016 IPR028081 Leucine-binding protein domain PAM18_RS20275 5d89991f061b8f004ee4ee17c3afab3a 373 PANTHER PTHR30483 7 372 1.6E-177 T 26-04-2016 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 PANTHER PTHR10909 1 385 0.0 T 26-04-2016 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:2.40.110.10 121 218 1.7E-40 T 26-04-2016 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:1.20.140.10 219 381 1.3E-56 T 26-04-2016 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 SUPERFAMILY SSF56645 2 241 2.62E-82 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 6.0E-43 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.4E-24 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 SUPERFAMILY SSF47203 229 377 3.22E-44 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 5.5E-33 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:1.10.540.10 3 119 1.5E-37 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS10640 d915cc951a8e7aa3aac72b61548620ff 386 PANTHER PTHR10909:SF325 1 385 0.0 T 26-04-2016 PAM18_RS18375 35fb308a928e792be20878aa20b3a8b1 128 SUPERFAMILY SSF54427 4 127 9.25E-45 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS18375 35fb308a928e792be20878aa20b3a8b1 128 Pfam PF14534 Domain of unknown function (DUF4440) 26 114 8.9E-7 T 26-04-2016 IPR027843 Domain of unknown function DUF4440 PAM18_RS18375 35fb308a928e792be20878aa20b3a8b1 128 PIRSF PIRSF029394 1 128 9.1E-52 T 26-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 PAM18_RS18375 35fb308a928e792be20878aa20b3a8b1 128 Gene3D G3DSA:3.10.450.50 3 127 1.8E-45 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16820 021baa9421d6f31dbb048a4d89abeab7 508 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 196 505 1.8E-115 T 26-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase PAM18_RS16820 021baa9421d6f31dbb048a4d89abeab7 508 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 1.1E-46 T 26-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 351 6.1E-35 T 26-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 SUPERFAMILY SSF51695 41 357 3.4E-59 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344 261 358 3.1E-69 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344 209 243 3.1E-69 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344 42 191 3.1E-69 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 Gene3D G3DSA:3.20.20.190 43 356 1.3E-71 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344:SF7 261 358 3.1E-69 T 26-04-2016 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344:SF7 209 243 3.1E-69 T 26-04-2016 PAM18_RS13830 ed5cf1f1598f8d77f1c461699c511e10 375 PANTHER PTHR23344:SF7 42 191 3.1E-69 T 26-04-2016 PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 PANTHER PTHR33706 19 156 1.4E-26 T 26-04-2016 PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 SUPERFAMILY SSF82185 12 134 4.97E-26 T 26-04-2016 PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 PANTHER PTHR33706:SF1 19 156 1.4E-26 T 26-04-2016 PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 Gene3D G3DSA:2.20.110.10 43 144 1.2E-16 T 26-04-2016 PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 Pfam PF07661 MORN repeat variant 96 117 0.0023 T 26-04-2016 IPR011652 MORN variant PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 Pfam PF07661 MORN repeat variant 72 93 1.3 T 26-04-2016 IPR011652 MORN variant PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 Pfam PF07661 MORN repeat variant 120 141 0.24 T 26-04-2016 IPR011652 MORN variant PAM18_RS13715 cda062a0609e5d7eaf8e35df84cc9185 178 Pfam PF07661 MORN repeat variant 48 65 0.22 T 26-04-2016 IPR011652 MORN variant PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 SUPERFAMILY SSF53850 89 290 4.52E-38 T 26-04-2016 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 Gene3D G3DSA:3.40.190.10 91 176 8.8E-19 T 26-04-2016 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 Pfam PF03466 LysR substrate binding domain 88 286 4.3E-36 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 SUPERFAMILY SSF46785 1 87 8.27E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 PANTHER PTHR30537:SF3 1 288 2.6E-138 T 26-04-2016 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-5 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 Gene3D G3DSA:3.40.190.10 177 243 7.6E-6 T 26-04-2016 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-15 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 PANTHER PTHR30537 1 288 2.6E-138 T 26-04-2016 PAM18_RS19890 4cbed851749acf24fcc554b6025ad02f 291 Gene3D G3DSA:1.10.10.10 1 86 6.4E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01065 0f6435f324f87d39f8c1c80e3df3b0d6 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 3.9E-111 T 26-04-2016 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 PAM18_RS01065 0f6435f324f87d39f8c1c80e3df3b0d6 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 61 3.2E-26 T 26-04-2016 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 SMART SM00155 108 135 3.6E-4 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 SMART SM00155 278 305 2.0 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 Pfam PF13091 PLD-like domain 206 330 1.8E-24 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 Pfam PF13091 PLD-like domain 24 140 3.7E-14 T 26-04-2016 IPR025202 Phospholipase D-like domain PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 PANTHER PTHR21248:SF5 1 373 1.6E-121 T 26-04-2016 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 Gene3D G3DSA:3.30.870.10 2 175 1.1E-44 T 26-04-2016 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 Gene3D G3DSA:3.30.870.10 199 352 1.6E-32 T 26-04-2016 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 SUPERFAMILY SSF56024 183 352 4.71E-40 T 26-04-2016 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 376 52.821 T 26-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 SUPERFAMILY SSF56024 3 175 6.59E-42 T 26-04-2016 PAM18_RS14805 1649294e46a78355b406a682dfe2d117 401 PANTHER PTHR21248 1 373 1.6E-121 T 26-04-2016 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 Gene3D G3DSA:3.40.1080.10 6 218 7.7E-101 T 26-04-2016 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 SUPERFAMILY SSF100950 5 226 7.85E-89 T 26-04-2016 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 26-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 SMART SM00882 8 219 8.0E-92 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 Pfam PF01144 Coenzyme A transferase 11 218 5.8E-78 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 PANTHER PTHR13707 1 232 1.3E-141 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15615 1d2a035d6cd13d55e87f564b6696fe88 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 218 1.0E-76 T 26-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 Pfam PF13692 Glycosyl transferases group 1 318 468 6.8E-22 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 SUPERFAMILY SSF53756 157 217 4.89E-59 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 SUPERFAMILY SSF53756 247 502 4.89E-59 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 SUPERFAMILY SSF53756 16 59 4.89E-59 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 PANTHER PTHR12526 129 225 3.0E-40 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 PANTHER PTHR12526 250 506 3.0E-40 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 Gene3D G3DSA:3.40.50.2000 289 480 1.3E-21 T 26-04-2016 PAM18_RS09770 c5facc3e583948114e5fafe71e1cde79 507 Pfam PF11997 Domain of unknown function (DUF3492) 12 290 1.2E-91 T 26-04-2016 IPR022622 Domain of unknown function DUF3492 PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 SUPERFAMILY SSF53335 7 264 7.38E-80 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 261 1.7E-64 T 26-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 SMART SM00650 23 195 1.6E-87 T 26-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 Gene3D G3DSA:3.40.50.150 3 194 1.5E-69 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 PANTHER PTHR11727 1 265 5.0E-99 T 26-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 26-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 Gene3D G3DSA:1.10.8.100 198 263 1.1E-26 T 26-04-2016 IPR023165 rRNA adenine dimethylase-like PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 57.96 T 26-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PAM18_RS03000 f79b827f09f797a2206386b363a59777 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 261 3.2E-83 T 26-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:3.40.190.10 192 240 6.7E-9 T 26-04-2016 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 PANTHER PTHR30579 1 292 7.8E-126 T 26-04-2016 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 SUPERFAMILY SSF53850 90 283 1.99E-28 T 26-04-2016 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 PANTHER PTHR30579:SF0 1 292 7.8E-126 T 26-04-2016 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 SUPERFAMILY SSF46785 1 110 3.32E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:3.40.190.10 89 191 7.2E-14 T 26-04-2016 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 Gene3D G3DSA:1.10.10.10 1 82 1.6E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 Pfam PF03466 LysR substrate binding domain 89 281 4.5E-30 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.5E-21 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS13100 62538ef0ba15e8c31b6fd662b0acdd78 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS20680 84cdd045a200854149fb2f9cf0bfde35 283 Gene3D G3DSA:3.40.47.10 23 154 6.7E-12 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS20680 84cdd045a200854149fb2f9cf0bfde35 283 SUPERFAMILY SSF53901 23 156 2.36E-11 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 307 2.5E-104 T 26-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 PANTHER PTHR10584:SF170 3 297 8.6E-117 T 26-04-2016 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 SUPERFAMILY SSF53613 4 295 4.83E-64 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 Pfam PF00294 pfkB family carbohydrate kinase 17 289 2.3E-42 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 Gene3D G3DSA:3.40.1190.20 35 308 7.5E-78 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 PIRSF PIRSF000535 1 310 5.3E-83 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 PANTHER PTHR10584 3 297 8.6E-117 T 26-04-2016 PAM18_RS07340 53965af62c8edd41c3ccd61475d21109 314 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 307 7.1E-104 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PAM18_RS24225 540af7e72bd4000030403f6cd4d555f4 157 SUPERFAMILY SSF51182 21 125 1.18E-11 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS24225 540af7e72bd4000030403f6cd4d555f4 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 138 3.5E-44 T 26-04-2016 IPR027565 Cupin fold metalloprotein, WbuC family PAM18_RS24225 540af7e72bd4000030403f6cd4d555f4 157 Gene3D G3DSA:2.60.120.10 34 113 1.2E-5 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 SUPERFAMILY SSF46689 12 86 1.85E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 PANTHER PTHR30055:SF71 7 156 8.7E-52 T 26-04-2016 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 PANTHER PTHR30055 7 156 8.7E-52 T 26-04-2016 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 Gene3D G3DSA:1.10.357.10 7 198 1.1E-25 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.3E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.3E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19460 e402915daee0abd91eb9ddc2fa8930bf 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 2.2E-12 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19500 9dfd9a11f84565c37610529fc261c1e1 292 PANTHER PTHR20883:SF0 5 276 1.7E-56 T 26-04-2016 PAM18_RS19500 9dfd9a11f84565c37610529fc261c1e1 292 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 7 197 9.3E-31 T 26-04-2016 IPR008775 Phytanoyl-CoA dioxygenase PAM18_RS19500 9dfd9a11f84565c37610529fc261c1e1 292 SUPERFAMILY SSF51197 5 215 5.4E-27 T 26-04-2016 PAM18_RS19500 9dfd9a11f84565c37610529fc261c1e1 292 Gene3D G3DSA:2.60.120.620 5 209 1.1E-25 T 26-04-2016 PAM18_RS19500 9dfd9a11f84565c37610529fc261c1e1 292 PANTHER PTHR20883 5 276 1.7E-56 T 26-04-2016 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 PANTHER PTHR30002:SF4 10 360 2.5E-188 T 26-04-2016 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 SUPERFAMILY SSF46548 147 265 1.05E-18 T 26-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 Pfam PF08331 Domain of unknown function (DUF1730) 70 148 3.1E-25 T 26-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 PANTHER PTHR30002 10 360 2.5E-188 T 26-04-2016 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 Gene3D G3DSA:3.30.70.20 197 266 8.0E-7 T 26-04-2016 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 15 324 50.2 T 26-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 1.5E-19 T 26-04-2016 PAM18_RS25905 0ae02b8079368bc568313bec03d8e287 361 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 22 358 2.4E-152 T 26-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 PANTHER PTHR11908 2 159 1.1E-23 T 26-04-2016 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 PANTHER PTHR11908:SF66 2 159 1.1E-23 T 26-04-2016 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 Gene3D G3DSA:3.10.20.30 3 83 1.6E-20 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 SUPERFAMILY SSF54292 4 87 2.1E-17 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 Gene3D G3DSA:1.10.150.120 84 172 7.2E-23 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 39 80 1.9E-5 T 26-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 Pfam PF01799 [2Fe-2S] binding domain 82 166 1.4E-20 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS24095 ec313e96fc64c9fecab6baf67d8d30c7 179 SUPERFAMILY SSF47741 99 174 2.22E-19 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 PANTHER PTHR24322 8 130 1.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 PANTHER PTHR24322 146 180 1.1E-26 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 SUPERFAMILY SSF51735 6 232 2.51E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.1E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.1E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 6.1E-9 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 4.8E-27 T 26-04-2016 PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 Gene3D G3DSA:3.40.50.720 6 233 2.0E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07860 4f6082cfe8e5ba4b0dd8e53e1e5b25c9 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 Pfam PF13629 Pilus formation protein N terminal region 17 86 1.9E-19 T 26-04-2016 IPR032789 Pilus formation protein, N-terminal PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 PANTHER PTHR30332:SF1 1 393 1.8E-143 T 26-04-2016 PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 Pfam PF00263 Bacterial type II and III secretion system protein 187 349 1.6E-43 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 PANTHER PTHR30332 1 393 1.8E-143 T 26-04-2016 PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 183 207 7.7E-11 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 313 331 7.7E-11 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22455 1430424b2adcaf621beca9f5488ad7d3 394 PRINTS PR00811 Bacterial general secretion pathway protein D signature 336 350 7.7E-11 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 Gene3D G3DSA:3.10.180.10 2 131 1.1E-40 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 PANTHER PTHR33990 2 159 6.3E-127 T 26-04-2016 PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 PIRSF PIRSF021700 1 159 1.4E-68 T 26-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 SUPERFAMILY SSF54593 4 157 1.45E-48 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 119 1.6E-46 T 26-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase PAM18_RS11575 d5d5f273fe53d8895524f236e3727571 159 PANTHER PTHR33990:SF3 2 159 6.3E-127 T 26-04-2016 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 PIRSF PIRSF000337 3 448 1.1E-145 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 SUPERFAMILY SSF51679 3 437 7.59E-126 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 Gene3D G3DSA:3.20.20.30 351 436 1.2E-134 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 Gene3D G3DSA:3.20.20.30 2 316 1.2E-134 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 Pfam PF00296 Luciferase-like monooxygenase 26 391 1.5E-60 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 PANTHER PTHR30011:SF16 1 453 1.2E-251 T 26-04-2016 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 PANTHER PTHR30011 1 453 1.2E-251 T 26-04-2016 PAM18_RS13850 d68d04b07ee6d05c2a0285d4861958de 462 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 433 1.6E-167 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS18465 e534e7960a449ab519f764b6786cba77 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 275 3.7E-42 T 26-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PAM18_RS18465 e534e7960a449ab519f764b6786cba77 310 PANTHER PTHR10996:SF148 44 308 4.5E-124 T 26-04-2016 PAM18_RS18465 e534e7960a449ab519f764b6786cba77 310 SUPERFAMILY SSF51735 97 275 8.23E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18465 e534e7960a449ab519f764b6786cba77 310 PANTHER PTHR10996 44 308 4.5E-124 T 26-04-2016 PAM18_RS18465 e534e7960a449ab519f764b6786cba77 310 Gene3D G3DSA:3.40.50.720 97 275 1.5E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS15425 8f8bfebddebd361b547886e521c1ec90 173 SUPERFAMILY SSF53335 23 153 9.6E-11 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15425 8f8bfebddebd361b547886e521c1ec90 173 Pfam PF08241 Methyltransferase domain 80 116 1.7E-4 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS15425 8f8bfebddebd361b547886e521c1ec90 173 Gene3D G3DSA:3.40.50.150 77 156 1.2E-7 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS07755 85cf47fd7f6fdccc8755c4b577a1e30e 250 Pfam PF01925 Sulfite exporter TauE/SafE 10 241 1.2E-40 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS07755 85cf47fd7f6fdccc8755c4b577a1e30e 250 PANTHER PTHR30269:SF14 1 248 1.3E-84 T 26-04-2016 PAM18_RS07755 85cf47fd7f6fdccc8755c4b577a1e30e 250 PANTHER PTHR30269 1 248 1.3E-84 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS07800 7f7eb5ba95b6d5b786a2ce5bc35f0c0a 274 Gene3D G3DSA:1.10.3720.10 68 261 1.1E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07800 7f7eb5ba95b6d5b786a2ce5bc35f0c0a 274 PANTHER PTHR30151 1 274 2.3E-121 T 26-04-2016 PAM18_RS07800 7f7eb5ba95b6d5b786a2ce5bc35f0c0a 274 SUPERFAMILY SSF161098 68 249 3.53E-30 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07800 7f7eb5ba95b6d5b786a2ce5bc35f0c0a 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 3.0E-25 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07800 7f7eb5ba95b6d5b786a2ce5bc35f0c0a 274 PANTHER PTHR30151:SF8 1 274 2.3E-121 T 26-04-2016 PAM18_RS05850 5d925b70d4a44efa3c49099d81feb633 158 PANTHER PTHR36302 1 156 3.9E-41 T 26-04-2016 PAM18_RS05850 5d925b70d4a44efa3c49099d81feb633 158 PANTHER PTHR36302:SF1 1 156 3.9E-41 T 26-04-2016 PAM18_RS05850 5d925b70d4a44efa3c49099d81feb633 158 SUPERFAMILY SSF110087 1 146 6.93E-51 T 26-04-2016 IPR007410 DR1885-like metal-binding protein PAM18_RS05850 5d925b70d4a44efa3c49099d81feb633 158 Pfam PF04314 Protein of unknown function (DUF461) 30 138 3.8E-38 T 26-04-2016 IPR007410 DR1885-like metal-binding protein PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 PANTHER PTHR11695:SF31 15 325 4.8E-144 T 26-04-2016 PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 Gene3D G3DSA:3.90.180.10 1 145 3.8E-49 T 26-04-2016 IPR011032 GroES-like PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 SUPERFAMILY SSF50129 1 140 4.72E-41 T 26-04-2016 IPR011032 GroES-like PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 SMART SM00829 10 322 1.1E-57 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 Pfam PF00107 Zinc-binding dehydrogenase 151 272 4.8E-32 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 PANTHER PTHR11695 15 325 4.8E-144 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 7.6E-11 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 SUPERFAMILY SSF51735 111 274 2.42E-52 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27360 20d512ec592e108d2c8cacf8e157dbd2 325 Gene3D G3DSA:3.40.50.720 146 262 3.3E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 PANTHER PTHR18866 155 266 4.2E-48 T 26-04-2016 PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 294 3.9E-74 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 Pfam PF02626 Allophanate hydrolase subunit 2 26 289 2.3E-77 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 SUPERFAMILY SSF50891 184 293 4.93E-9 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 PANTHER PTHR18866:SF102 155 266 4.2E-48 T 26-04-2016 PAM18_RS23495 0b40318da3322f6dc5cdb4d92ede441a 309 SMART SM00797 25 307 2.2E-118 T 26-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 SUPERFAMILY SSF55159 13 120 1.15E-27 T 26-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 14 123 9.5E-38 T 26-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 Pfam PF01253 Translation initiation factor SUI1 49 117 1.3E-16 T 26-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 Gene3D G3DSA:3.30.780.10 44 123 9.0E-30 T 26-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 PANTHER PTHR12789 7 123 5.3E-30 T 26-04-2016 PAM18_RS25345 6be6b54749d07984f83a9a7f58613370 123 PIRSF PIRSF037511 1 123 5.0E-44 T 26-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 549 793 8.0E-89 T 26-04-2016 IPR014145 DNA ligase D, polymerase domain PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 219 521 6.9E-111 T 26-04-2016 IPR014146 DNA ligase D, ligase domain PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Pfam PF04679 ATP dependent DNA ligase C terminal region 418 515 1.5E-23 T 26-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 7 162 5.5E-71 T 26-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Pfam PF01068 ATP dependent DNA ligase domain 224 399 1.7E-22 T 26-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 PANTHER PTHR10459:SF44 215 521 3.6E-74 T 26-04-2016 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Gene3D G3DSA:3.30.1490.70 357 400 4.4E-17 T 26-04-2016 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Gene3D G3DSA:3.30.1490.70 211 240 4.4E-17 T 26-04-2016 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 SUPERFAMILY SSF50249 403 523 4.71E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 SUPERFAMILY SSF56091 216 399 2.3E-45 T 26-04-2016 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 PANTHER PTHR10459 215 521 3.6E-74 T 26-04-2016 PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 228 823 1.8E-229 T 26-04-2016 IPR014143 DNA ligase D PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Pfam PF13298 DNA polymerase Ligase (LigD) 40 144 4.8E-39 T 26-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Gene3D G3DSA:2.40.50.140 403 521 1.6E-43 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS14895 2335c19e8082fef3571349b282659a08 840 Gene3D G3DSA:3.30.470.30 241 347 1.4E-28 T 26-04-2016 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 PANTHER PTHR10992 5 286 1.3E-49 T 26-04-2016 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 Gene3D G3DSA:3.40.50.1820 5 280 1.4E-51 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 PANTHER PTHR10992:SF909 5 286 1.3E-49 T 26-04-2016 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 SUPERFAMILY SSF53474 5 285 1.76E-47 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.6E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.6E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.6E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS17555 f838280137efbaf6ce302086531cdf15 286 Pfam PF00561 alpha/beta hydrolase fold 28 137 6.5E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS23265 a845a9808bd6253b683a15ea92535c19 102 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.1E-28 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PAM18_RS23265 a845a9808bd6253b683a15ea92535c19 102 SUPERFAMILY SSF69754 1 95 2.09E-35 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PAM18_RS23265 a845a9808bd6253b683a15ea92535c19 102 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-36 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PAM18_RS23265 a845a9808bd6253b683a15ea92535c19 102 Gene3D G3DSA:3.30.160.100 1 92 1.6E-37 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 PAM18_RS23265 a845a9808bd6253b683a15ea92535c19 102 PANTHER PTHR33231 1 95 7.0E-41 T 26-04-2016 PAM18_RS13280 c78f122cbbd4a50c8fb7b095e21d6ed3 178 Pfam PF13673 Acetyltransferase (GNAT) domain 69 159 7.1E-9 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS13280 c78f122cbbd4a50c8fb7b095e21d6ed3 178 Gene3D G3DSA:3.40.630.30 7 156 7.7E-15 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS13280 c78f122cbbd4a50c8fb7b095e21d6ed3 178 SUPERFAMILY SSF55729 5 161 5.83E-16 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS00055 334f2e19f7d0f239cc5539764050883c 295 PIRSF PIRSF026649 1 295 1.4E-89 T 26-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PAM18_RS00055 334f2e19f7d0f239cc5539764050883c 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 285 1.4E-44 T 26-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PAM18_RS00055 334f2e19f7d0f239cc5539764050883c 295 PANTHER PTHR30606:SF5 7 295 7.1E-135 T 26-04-2016 PAM18_RS00055 334f2e19f7d0f239cc5539764050883c 295 PANTHER PTHR30606 7 295 7.1E-135 T 26-04-2016 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 SMART SM00642 256 624 7.6E-7 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Gene3D G3DSA:3.20.20.80 251 617 1.5E-92 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 106 731 44.598 T 26-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Pfam PF00128 Alpha amylase, catalytic domain 280 351 6.6E-9 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 SUPERFAMILY SSF81296 21 119 1.54E-15 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 PIRSF PIRSF000463 12 732 5.7E-281 T 26-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 SUPERFAMILY SSF51011 630 730 2.64E-29 T 26-04-2016 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 PANTHER PTHR10357 55 730 0.0 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 114 729 4.7E-274 T 26-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 SUPERFAMILY SSF81296 143 200 5.6E-10 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 SUPERFAMILY SSF51445 185 621 2.64E-116 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 633 730 1.3E-21 T 26-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Gene3D G3DSA:2.60.40.10 118 225 4.4E-37 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Gene3D G3DSA:2.60.40.10 22 111 5.9E-12 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Gene3D G3DSA:2.60.40.1180 630 730 8.3E-33 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 130 212 2.1E-22 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PAM18_RS14815 22833174f22d587057c47ed6634c59ad 732 PANTHER PTHR10357:SF160 55 730 0.0 T 26-04-2016 PAM18_RS08665 424c19d293080793d9eafdb1faf17dda 440 Pfam PF07396 Phosphate-selective porin O and P 58 440 1.4E-108 T 26-04-2016 IPR010870 Phosphate-selective porin O/P PAM18_RS08665 424c19d293080793d9eafdb1faf17dda 440 SUPERFAMILY SSF56935 284 440 1.9E-24 T 26-04-2016 PAM18_RS08665 424c19d293080793d9eafdb1faf17dda 440 SUPERFAMILY SSF56935 55 250 1.9E-24 T 26-04-2016 PAM18_RS08665 424c19d293080793d9eafdb1faf17dda 440 Gene3D G3DSA:2.40.160.10 32 440 2.3E-127 T 26-04-2016 IPR023614 Porin domain PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 PANTHER PTHR11071 23 184 6.9E-102 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 PANTHER PTHR11071:SF265 23 184 6.9E-102 T 26-04-2016 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 Gene3D G3DSA:2.40.100.10 26 185 5.7E-53 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 26-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 SUPERFAMILY SSF50891 25 185 1.05E-56 T 26-04-2016 IPR029000 Cyclophilin-like domain PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 3.5E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 3.5E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 3.5E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS08945 cbcde0bbaa99ea6051421d599a14a1e5 187 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 185 4.6E-48 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 PAM18_RS19390 05f0d13bc93b32fad9c86ce6a39f6ce2 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 264 5.2E-34 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS19390 05f0d13bc93b32fad9c86ce6a39f6ce2 265 PANTHER PTHR11941 1 262 8.5E-195 T 26-04-2016 PAM18_RS19390 05f0d13bc93b32fad9c86ce6a39f6ce2 265 SUPERFAMILY SSF52096 10 265 4.35E-61 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS19390 05f0d13bc93b32fad9c86ce6a39f6ce2 265 PANTHER PTHR11941:SF82 1 262 8.5E-195 T 26-04-2016 PAM18_RS19390 05f0d13bc93b32fad9c86ce6a39f6ce2 265 Gene3D G3DSA:3.90.226.10 11 263 1.4E-58 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 Gene3D G3DSA:1.10.600.10 4 293 1.2E-92 T 26-04-2016 IPR008949 Isoprenoid synthase domain PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 SUPERFAMILY SSF48576 5 287 1.41E-86 T 26-04-2016 IPR008949 Isoprenoid synthase domain PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 PANTHER PTHR12001:SF23 2 276 5.3E-105 T 26-04-2016 PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 PANTHER PTHR12001 2 276 5.3E-105 T 26-04-2016 IPR017446 Polyprenyl synthetase-related PAM18_RS04565 bf8f1e2ff8e3b7c71eee7ffcea4e83a6 295 Pfam PF00348 Polyprenyl synthetase 29 258 2.3E-58 T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 Pfam PF07687 Peptidase dimerisation domain 192 286 3.8E-11 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 Pfam PF01546 Peptidase family M20/M25/M40 77 385 4.3E-34 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 PANTHER PTHR11014:SF63 10 392 7.8E-157 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.30.70.360 186 301 8.1E-40 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.40.630.10 302 390 6.0E-101 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.40.630.10 4 182 6.0E-101 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 PANTHER PTHR11014 10 392 7.8E-157 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 PIRSF PIRSF005962 4 391 1.2E-120 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF53187 6 201 1.08E-87 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF53187 302 389 1.08E-87 T 26-04-2016 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 374 8.7E-108 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 PAM18_RS22660 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF55031 188 300 1.57E-30 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 Pfam PF04542 Sigma-70 region 2 35 95 9.4E-15 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 Pfam PF08281 Sigma-70, region 4 127 178 5.0E-16 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 PANTHER PTHR30173 31 189 3.0E-34 T 26-04-2016 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 Gene3D G3DSA:1.10.1740.10 33 117 2.1E-12 T 26-04-2016 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 SUPERFAMILY SSF88946 31 107 1.73E-13 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 PANTHER PTHR30173:SF9 31 189 3.0E-34 T 26-04-2016 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 179 6.7E-25 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 SUPERFAMILY SSF88659 102 183 5.42E-16 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS00755 715e424e6a5b3da7a455c630d87cfdda 195 Gene3D G3DSA:1.10.10.10 119 183 2.6E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 SUPERFAMILY SSF53383 6 401 3.36E-95 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 PANTHER PTHR11751 8 399 9.4E-197 T 26-04-2016 PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.90.1150.10 279 402 4.9E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 PANTHER PTHR11751:SF303 8 399 9.4E-197 T 26-04-2016 PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 Pfam PF00155 Aminotransferase class I and II 35 385 5.1E-48 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS10950 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.40.640.10 50 278 1.8E-68 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS00285 c3641bf4249b0cff7cfdd5906774b0ed 168 PANTHER PTHR36922 1 166 1.6E-93 T 26-04-2016 PAM18_RS00285 c3641bf4249b0cff7cfdd5906774b0ed 168 SUPERFAMILY SSF109854 4 166 2.01E-65 T 26-04-2016 PAM18_RS00285 c3641bf4249b0cff7cfdd5906774b0ed 168 Gene3D G3DSA:1.20.120.450 1 166 5.4E-75 T 26-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase PAM18_RS00285 c3641bf4249b0cff7cfdd5906774b0ed 168 PANTHER PTHR36922:SF1 1 166 1.6E-93 T 26-04-2016 PAM18_RS00285 c3641bf4249b0cff7cfdd5906774b0ed 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 4.9E-66 T 26-04-2016 IPR018531 Domain of unknown function DUF1993 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 Gene3D G3DSA:2.60.40.1070 134 219 5.9E-16 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 Gene3D G3DSA:2.60.40.360 31 129 9.2E-24 T 26-04-2016 IPR008962 PapD-like PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 SUPERFAMILY SSF49584 137 224 6.93E-15 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 SUPERFAMILY SSF49354 13 129 1.31E-22 T 26-04-2016 IPR008962 PapD-like PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PANTHER PTHR30251 1 225 2.6E-110 T 26-04-2016 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PRINTS PR00969 Pili chaperone signature 114 129 1.6E-17 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PRINTS PR00969 Pili chaperone signature 91 108 1.6E-17 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PRINTS PR00969 Pili chaperone signature 149 164 1.6E-17 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PRINTS PR00969 Pili chaperone signature 63 84 1.6E-17 T 26-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 129 1.2E-20 T 26-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 PANTHER PTHR30251:SF0 1 225 2.6E-110 T 26-04-2016 PAM18_RS02525 93da622eeeb0a5440fcae523d8a7ac66 233 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 155 215 2.8E-13 T 26-04-2016 IPR016148 Pili assembly chaperone, C-terminal PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PANTHER PTHR10264:SF80 6 289 1.2E-107 T 26-04-2016 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 SUPERFAMILY SSF117892 53 192 7.45E-28 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 7 157 6.8E-40 T 26-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 154 285 1.4E-45 T 26-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PIRSF PIRSF005651 1 289 5.4E-94 T 26-04-2016 IPR010200 HflC GO:0016021|GO:0052547 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 SMART SM00244 21 185 4.4E-38 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 115 132 5.7E-8 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 180 201 5.7E-8 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 161 179 5.7E-8 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 28 50 5.7E-8 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 Pfam PF01145 SPFH domain / Band 7 family 25 200 7.7E-30 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS25860 d6764fabb7c470a2657fca56f37e95a0 289 PANTHER PTHR10264 6 289 1.2E-107 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23930 b9ad84d52827d35a358509a5698332da 463 PANTHER PTHR35093 3 463 5.7E-183 T 26-04-2016 PAM18_RS23930 b9ad84d52827d35a358509a5698332da 463 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 463 5.7E-160 T 26-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PAM18_RS23930 b9ad84d52827d35a358509a5698332da 463 PANTHER PTHR35093:SF2 3 463 5.7E-183 T 26-04-2016 PAM18_RS23930 b9ad84d52827d35a358509a5698332da 463 Gene3D G3DSA:2.40.160.60 22 463 5.9E-119 T 26-04-2016 PAM18_RS23930 b9ad84d52827d35a358509a5698332da 463 SUPERFAMILY SSF56935 21 463 3.11E-84 T 26-04-2016 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF00884 Sulfatase 240 529 2.5E-54 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 SUPERFAMILY SSF53649 237 532 8.34E-20 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 PANTHER PTHR30443 2 551 2.1E-298 T 26-04-2016 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 7.7E-49 T 26-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Gene3D G3DSA:3.40.720.10 241 532 1.1E-15 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 PAM18_RS08500 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 PANTHER PTHR30443:SF0 2 551 2.1E-298 T 26-04-2016 PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 PANTHER PTHR38439 2 148 6.8E-63 T 26-04-2016 PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 Gene3D G3DSA:2.60.40.420 22 148 1.3E-59 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 TIGRFAM TIGR02695 azurin: azurin 23 147 1.5E-62 T 26-04-2016 IPR014068 Azurin, proteobacteria PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 148 2.5E-32 T 26-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 PANTHER PTHR38439:SF2 2 148 6.8E-63 T 26-04-2016 PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 26-04-2016 IPR028871 Blue (type 1) copper protein, binding site PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 146 5.0E-67 T 26-04-2016 PAM18_RS25755 fa752ba998c90bd70d52744650d0cdd2 148 SUPERFAMILY SSF49503 21 147 1.81E-48 T 26-04-2016 IPR008972 Cupredoxin PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 Pfam PF13840 ACT domain 70 126 4.4E-11 T 26-04-2016 IPR027795 GATS-like ACT domain PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 SUPERFAMILY SSF55021 70 128 2.44E-17 T 26-04-2016 PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 PANTHER PTHR39199:SF1 1 133 2.9E-63 T 26-04-2016 PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 SUPERFAMILY SSF55021 3 66 5.49E-17 T 26-04-2016 PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 Pfam PF10000 ACT domain 2 69 2.5E-27 T 26-04-2016 IPR018717 Domain of unknown function DUF2241 PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 Gene3D G3DSA:3.30.2130.10 1 130 1.4E-54 T 26-04-2016 PAM18_RS22765 953ccf98cda16299440683d749eb50a3 133 PANTHER PTHR39199 1 133 2.9E-63 T 26-04-2016 PAM18_RS02845 21e88aeb14493ef8a925616494677746 117 Pfam PF05656 Protein of unknown function (DUF805) 12 113 1.1E-32 T 26-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PAM18_RS02845 21e88aeb14493ef8a925616494677746 117 PANTHER PTHR34980 1 116 3.6E-35 T 26-04-2016 PAM18_RS17370 95589ea6cd5599abf5c55e4c0655afec 491 PANTHER PTHR35565 1 491 0.0 T 26-04-2016 PAM18_RS17370 95589ea6cd5599abf5c55e4c0655afec 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 489 1.1E-182 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS17370 95589ea6cd5599abf5c55e4c0655afec 491 PANTHER PTHR35565:SF1 1 491 0.0 T 26-04-2016 PAM18_RS17370 95589ea6cd5599abf5c55e4c0655afec 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 489 5.3E-217 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 Gene3D G3DSA:3.40.30.10 1 79 8.0E-28 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 SUPERFAMILY SSF52833 1 102 1.66E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 Pfam PF14497 Glutathione S-transferase, C-terminal domain 128 204 5.7E-13 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 PANTHER PTHR11260:SF285 1 211 6.4E-68 T 26-04-2016 PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 SUPERFAMILY SSF47616 78 209 6.69E-27 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 Gene3D G3DSA:1.20.1050.10 86 204 2.5E-22 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 79 1.5E-25 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS10985 26daef8655fa3ddc1a2c2d184bd65285 220 PANTHER PTHR11260 1 211 6.4E-68 T 26-04-2016 PAM18_RS18995 11186501b6ce967fab440f02a65b7c81 463 PANTHER PTHR11819:SF141 1 457 7.2E-212 T 26-04-2016 PAM18_RS18995 11186501b6ce967fab440f02a65b7c81 463 PANTHER PTHR11819 1 457 7.2E-212 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS18995 11186501b6ce967fab440f02a65b7c81 463 Pfam PF00474 Sodium:solute symporter family 32 416 6.5E-42 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS22855 bf8bf8bf68dda02f4d0dc885068139de 264 SUPERFAMILY SSF48317 19 230 6.54E-11 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS22855 bf8bf8bf68dda02f4d0dc885068139de 264 Gene3D G3DSA:1.20.144.10 77 207 3.0E-8 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS22855 bf8bf8bf68dda02f4d0dc885068139de 264 Pfam PF01569 PAP2 superfamily 100 229 9.2E-15 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 Gene3D G3DSA:3.90.700.10 342 500 7.0E-30 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 SUPERFAMILY SSF56425 324 502 1.36E-34 T 26-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 SUPERFAMILY SSF51905 7 125 3.48E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 SUPERFAMILY SSF51905 205 327 3.48E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 SUPERFAMILY SSF51905 507 567 3.48E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632:SF59 11 137 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632:SF59 489 564 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632:SF59 207 473 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 Gene3D G3DSA:3.50.50.60 504 565 1.5E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 Gene3D G3DSA:3.50.50.60 9 150 1.5E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 Gene3D G3DSA:3.50.50.60 214 319 1.5E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632 11 137 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632 489 564 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 PANTHER PTHR11632 207 473 2.3E-221 T 26-04-2016 PAM18_RS14370 c9f13630a6d333c8646d1066dfb4e95a 577 Pfam PF00890 FAD binding domain 14 549 6.1E-116 T 26-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00388 238 300 5.6E-4 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 445 1.1E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 6.2E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 6.2E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00387 343 448 1.0E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423:SF496 62 85 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423:SF496 180 445 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423:SF496 21 46 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF47384 221 292 1.37E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF55874 308 445 2.23E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423 62 85 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423 180 445 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 PANTHER PTHR24423 21 46 2.8E-124 T 26-04-2016 PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:3.30.565.10 308 445 4.0E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19690 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:1.10.287.130 236 288 1.4E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 SUPERFAMILY SSF53300 424 608 8.71E-19 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 Pfam PF00092 von Willebrand factor type A domain 427 575 1.9E-5 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 PANTHER PTHR41248 1 612 4.0E-212 T 26-04-2016 PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 Gene3D G3DSA:3.40.50.410 427 581 6.0E-7 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 SMART SM00327 421 604 6.7E-21 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS02655 78c9b4d4ba5331fc6a3325dfef879315 612 PANTHER PTHR41248:SF1 1 612 4.0E-212 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 SUPERFAMILY SSF51905 562 657 9.73E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 SUPERFAMILY SSF51905 466 524 9.73E-19 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 SUPERFAMILY SSF51971 337 526 5.89E-43 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 332 7.6E-87 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PANTHER PTHR22893:SF25 1 421 2.9E-255 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 642 4.0E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 1.4E-15 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 400 1.4E-15 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 1.4E-15 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 481 1.4E-15 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 SUPERFAMILY SSF51395 4 366 1.01E-113 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 626 640 2.6E-6 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 402 2.6E-6 T 26-04-2016 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 Gene3D G3DSA:3.20.20.70 7 364 5.6E-124 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 Gene3D G3DSA:3.50.50.60 365 470 1.1E-26 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 Gene3D G3DSA:3.50.50.60 475 632 8.6E-49 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09620 5659ffec0bcb8d4d43851da841ab2c47 679 PANTHER PTHR22893 1 421 2.9E-255 T 26-04-2016 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 Gene3D G3DSA:3.40.190.10 116 207 4.3E-6 T 26-04-2016 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 2 289 2.3E-99 T 26-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 SUPERFAMILY SSF53850 49 243 2.54E-36 T 26-04-2016 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 252 3.7E-81 T 26-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 277 4.7E-70 T 26-04-2016 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 PANTHER PTHR30043:SF4 22 136 2.6E-177 T 26-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 PANTHER PTHR30043:SF4 170 319 2.6E-177 T 26-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 PANTHER PTHR30043 22 136 2.6E-177 T 26-04-2016 PAM18_RS08135 c5c8b9f7303bb129dcba0f40d4c7eeaf 334 PANTHER PTHR30043 170 319 2.6E-177 T 26-04-2016 PAM18_RS18615 a722ccf02b70e91ea863c640da2a0917 551 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 30 547 3.8E-207 T 26-04-2016 IPR011935 Conserved hypothetical protein CHP02231 PAM18_RS18615 a722ccf02b70e91ea863c640da2a0917 551 PANTHER PTHR31005 1 550 1.5E-221 T 26-04-2016 PAM18_RS18615 a722ccf02b70e91ea863c640da2a0917 551 Pfam PF13598 Domain of unknown function (DUF4139) 221 543 2.2E-93 T 26-04-2016 IPR011935 Conserved hypothetical protein CHP02231 PAM18_RS18615 a722ccf02b70e91ea863c640da2a0917 551 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 34 133 7.2E-23 T 26-04-2016 IPR025554 Domain of unknown function DUF4140 PAM18_RS18615 a722ccf02b70e91ea863c640da2a0917 551 PANTHER PTHR31005:SF1 1 550 1.5E-221 T 26-04-2016 PAM18_RS02520 54bbff18c761356122b3f349a3c7a165 335 Pfam PF00419 Fimbrial protein 196 335 1.6E-15 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS02520 54bbff18c761356122b3f349a3c7a165 335 SUPERFAMILY SSF49401 208 334 1.14E-13 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS02520 54bbff18c761356122b3f349a3c7a165 335 Gene3D G3DSA:2.60.40.1090 216 335 4.8E-7 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 PANTHER PTHR10443 129 303 2.8E-136 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 PANTHER PTHR10443 359 443 2.8E-136 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 Gene3D G3DSA:1.10.287.650 305 362 9.8E-35 T 26-04-2016 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 SUPERFAMILY SSF51556 360 443 9.98E-77 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 SUPERFAMILY SSF51556 42 303 9.98E-77 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 Gene3D G3DSA:3.20.20.140 363 443 3.1E-96 T 26-04-2016 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 Gene3D G3DSA:3.20.20.140 39 303 3.1E-96 T 26-04-2016 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 49 436 5.7E-106 T 26-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 PANTHER PTHR10443:SF22 129 303 2.8E-136 T 26-04-2016 PAM18_RS13620 05d894cb99216bc3bc8b65c992a22413 448 PANTHER PTHR10443:SF22 359 443 2.8E-136 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 SUPERFAMILY SSF103473 4 436 9.68E-75 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 PANTHER PTHR23508 246 429 9.2E-246 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 PANTHER PTHR23508 1 228 9.2E-246 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 75 90 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 PANTHER PTHR23508:SF15 246 429 9.2E-246 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 PANTHER PTHR23508:SF15 1 228 9.2E-246 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 Gene3D G3DSA:1.20.1250.20 11 199 1.3E-34 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 Gene3D G3DSA:1.20.1250.20 252 425 2.3E-20 T 26-04-2016 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS25660 fbf240d1ba0ea63bff5f2842fe09c854 444 Pfam PF07690 Major Facilitator Superfamily 33 338 2.7E-36 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS11550 63c63a66cfa1e022aa67288e962f20ff 212 Gene3D G3DSA:3.80.30.10 64 143 1.2E-7 T 26-04-2016 PAM18_RS11550 63c63a66cfa1e022aa67288e962f20ff 212 SUPERFAMILY SSF102114 26 113 5.69E-6 T 26-04-2016 PAM18_RS11550 63c63a66cfa1e022aa67288e962f20ff 212 PANTHER PTHR30352:SF2 9 143 1.4E-34 T 26-04-2016 PAM18_RS11550 63c63a66cfa1e022aa67288e962f20ff 212 Pfam PF13353 4Fe-4S single cluster domain 16 144 9.2E-23 T 26-04-2016 PAM18_RS11550 63c63a66cfa1e022aa67288e962f20ff 212 PANTHER PTHR30352 9 143 1.4E-34 T 26-04-2016 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 SUPERFAMILY SSF53383 2 400 9.08E-89 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 PANTHER PTHR11751:SF354 12 400 6.7E-157 T 26-04-2016 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 Gene3D G3DSA:3.90.1150.10 270 400 6.2E-25 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 398 2.4E-202 T 26-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 Pfam PF00155 Aminotransferase class I and II 32 395 5.5E-44 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 PANTHER PTHR11751 12 400 6.7E-157 T 26-04-2016 PAM18_RS06515 2a65c7b592d35c4925803bcb88ca5d31 402 Gene3D G3DSA:3.40.640.10 44 269 3.1E-62 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS10980 b31b0365d98c5cd48a5616264d14906f 160 PANTHER PTHR21021 14 157 6.1E-52 T 26-04-2016 PAM18_RS10980 b31b0365d98c5cd48a5616264d14906f 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 97 114 - T 26-04-2016 IPR000614 Free Met sulfoxide reductase conserved site PAM18_RS10980 b31b0365d98c5cd48a5616264d14906f 160 Pfam PF13185 GAF domain 41 151 2.8E-9 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS10980 b31b0365d98c5cd48a5616264d14906f 160 SUPERFAMILY SSF55781 19 153 4.17E-37 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS10980 b31b0365d98c5cd48a5616264d14906f 160 Gene3D G3DSA:3.30.450.40 16 152 5.6E-46 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 Gene3D G3DSA:3.40.50.300 3 227 5.9E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 SMART SM00382 28 214 1.7E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 Pfam PF00005 ABC transporter 20 156 1.9E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 PANTHER PTHR24220:SF595 5 220 5.8E-138 T 26-04-2016 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 PANTHER PTHR24220:SF595 251 294 5.8E-138 T 26-04-2016 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 PANTHER PTHR24220 5 220 5.8E-138 T 26-04-2016 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 PANTHER PTHR24220 251 294 5.8E-138 T 26-04-2016 PAM18_RS08080 5cabafafea58809462bf6a9ce69c0a82 304 SUPERFAMILY SSF52540 3 218 2.31E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 Pfam PF00248 Aldo/keto reductase family 15 311 3.5E-72 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 PANTHER PTHR11732:SF150 1 313 5.1E-131 T 26-04-2016 PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 PANTHER PTHR11732 1 313 5.1E-131 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 PRINTS PR00069 Aldo-keto reductase signature 142 159 7.7E-6 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 PRINTS PR00069 Aldo-keto reductase signature 45 69 7.7E-6 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 PRINTS PR00069 Aldo-keto reductase signature 111 129 7.7E-6 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 Gene3D G3DSA:3.20.20.100 1 312 2.2E-100 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS16960 e8e33de49be895f50a4527ca592b72e0 323 SUPERFAMILY SSF51430 1 313 2.62E-99 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS12485 868e10d4d70a9113240870f359629c70 593 Gene3D G3DSA:3.40.50.150 5 242 2.2E-13 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12485 868e10d4d70a9113240870f359629c70 593 Pfam PF00145 C-5 cytosine-specific DNA methylase 151 212 3.2E-5 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12485 868e10d4d70a9113240870f359629c70 593 SUPERFAMILY SSF53335 9 274 1.77E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12485 868e10d4d70a9113240870f359629c70 593 SUPERFAMILY SSF53335 493 554 1.77E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS12485 868e10d4d70a9113240870f359629c70 593 SUPERFAMILY SSF53335 363 391 1.77E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 SUPERFAMILY SSF54523 281 320 3.14E-9 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 SUPERFAMILY SSF54523 43 103 3.14E-9 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 Gene3D G3DSA:3.30.1300.30 282 320 2.0E-7 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 Gene3D G3DSA:3.30.1300.30 30 101 2.0E-7 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 PANTHER PTHR21180:SF32 3 316 1.2E-47 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 PANTHER PTHR21180 3 316 1.2E-47 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 SUPERFAMILY SSF158544 104 218 4.71E-7 T 26-04-2016 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 PIRSF PIRSF002786 1 321 6.8E-92 T 26-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 SUPERFAMILY SSF47781 218 272 3.78E-6 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS22245 73b341994a1624734b7119fbe7041557 321 Pfam PF03934 Type II secretion system (T2SS), protein K 31 313 1.6E-66 T 26-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 263 9.3E-53 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 Gene3D G3DSA:3.90.226.10 3 205 2.8E-57 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 Gene3D G3DSA:1.10.12.10 206 263 8.0E-13 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 PANTHER PTHR11941 1 261 2.6E-128 T 26-04-2016 PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 PANTHER PTHR11941:SF86 1 261 2.6E-128 T 26-04-2016 PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 SUPERFAMILY SSF52096 3 263 1.44E-73 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS15545 47eff747d63900ec4c577efdae98efb7 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 SUPERFAMILY SSF51735 111 279 4.24E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 98 1.6E-21 T 26-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 SUPERFAMILY SSF53223 6 110 1.44E-26 T 26-04-2016 PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 Gene3D G3DSA:3.40.50.720 116 279 6.6E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 PANTHER PTHR21089 8 277 1.2E-59 T 26-04-2016 PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 281 27.289 T 26-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 PAM18_RS01210 1d1302663e037ec625010d38de88eb19 284 Gene3D G3DSA:3.40.192.10 8 115 3.2E-32 T 26-04-2016 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 SUPERFAMILY SSF56770 44 190 6.54E-64 T 26-04-2016 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 26-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 PANTHER PTHR11995:SF14 2 221 5.8E-134 T 26-04-2016 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 Gene3D G3DSA:3.40.50.700 52 179 2.1E-30 T 26-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 47 183 5.6E-68 T 26-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 PANTHER PTHR11995 2 221 5.8E-134 T 26-04-2016 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 42.636 T 26-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 PAM18_RS12005 0603bd0c7e77b4f31eac8a17df317b83 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 175 1.1E-21 T 26-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 PAM18_RS22905 45c7c43bab6be3057b506b37a66dc898 333 Pfam PF04338 Protein of unknown function, DUF481 131 333 9.7E-31 T 26-04-2016 IPR007433 Protein of unknown function DUF481 PAM18_RS15005 fffe3e4259375f6d231d605ca255b1bf 79 Pfam PF10976 Protein of unknown function (DUF2790) 21 77 6.2E-18 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS11935 5cb33d209e05b05d3d4dc47bf6fdf3e1 352 PANTHER PTHR21716:SF13 1 351 5.1E-114 T 26-04-2016 PAM18_RS11935 5cb33d209e05b05d3d4dc47bf6fdf3e1 352 PANTHER PTHR21716 1 351 5.1E-114 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS11935 5cb33d209e05b05d3d4dc47bf6fdf3e1 352 Pfam PF01594 Domain of unknown function DUF20 14 339 1.2E-52 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS03805 e3ba57847fd85ff92bad0cc656a8fff3 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 118 8.1E-26 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS03805 e3ba57847fd85ff92bad0cc656a8fff3 234 Gene3D G3DSA:1.10.3720.10 24 224 1.7E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03805 e3ba57847fd85ff92bad0cc656a8fff3 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 224 4.2E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03805 e3ba57847fd85ff92bad0cc656a8fff3 234 PANTHER PTHR30614 1 230 7.1E-80 T 26-04-2016 PAM18_RS03805 e3ba57847fd85ff92bad0cc656a8fff3 234 SUPERFAMILY SSF161098 23 210 1.16E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS06040 97319d34c8c025d500687e9b9f5f807e 174 PANTHER PTHR13061 13 172 2.2E-73 T 26-04-2016 PAM18_RS06040 97319d34c8c025d500687e9b9f5f807e 174 SUPERFAMILY SSF51161 4 167 9.01E-48 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS06040 97319d34c8c025d500687e9b9f5f807e 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 6.4E-9 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS06040 97319d34c8c025d500687e9b9f5f807e 174 Gene3D G3DSA:2.160.10.10 3 167 1.1E-49 T 26-04-2016 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 Gene3D G3DSA:1.10.10.10 1 82 9.1E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 SUPERFAMILY SSF53850 87 275 1.72E-24 T 26-04-2016 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 SUPERFAMILY SSF46785 1 109 1.27E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 Pfam PF03466 LysR substrate binding domain 87 273 7.1E-22 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 PANTHER PTHR30126:SF21 1 287 4.2E-179 T 26-04-2016 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-19 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 PANTHER PTHR30126 1 287 4.2E-179 T 26-04-2016 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS16340 cd5db7e6d2d4537063c7c3993f237a43 287 Gene3D G3DSA:3.40.190.10 92 193 7.8E-13 T 26-04-2016 PAM18_RS28370 21989ec3574ac6532f1f1c7713a88e6f 404 Pfam PF04143 Sulphur transport 54 380 2.6E-80 T 26-04-2016 IPR007272 Sulphur transport domain PAM18_RS28370 21989ec3574ac6532f1f1c7713a88e6f 404 PANTHER PTHR30574:SF5 29 399 2.0E-108 T 26-04-2016 PAM18_RS28370 21989ec3574ac6532f1f1c7713a88e6f 404 PANTHER PTHR30574 29 399 2.0E-108 T 26-04-2016 PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 284 378 1.4E-15 T 26-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 SUPERFAMILY SSF56300 1 344 2.34E-55 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 3.5E-54 T 26-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 PANTHER PTHR30337 1 358 2.3E-109 T 26-04-2016 PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 231 1.8E-13 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 PANTHER PTHR30337:SF0 1 358 2.3E-109 T 26-04-2016 PAM18_RS22340 fbe4e84d2187f7e56d1589da365cbaea 409 Gene3D G3DSA:3.60.21.10 1 279 1.4E-65 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS22195 b0ee250e94f001c775ab2bd7a682d450 544 Gene3D G3DSA:3.10.20.310 45 121 9.2E-9 T 26-04-2016 PAM18_RS22195 b0ee250e94f001c775ab2bd7a682d450 544 Pfam PF08479 POTRA domain, ShlB-type 48 121 5.7E-18 T 26-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type PAM18_RS22195 b0ee250e94f001c775ab2bd7a682d450 544 PANTHER PTHR34597:SF1 2 544 6.0E-202 T 26-04-2016 PAM18_RS22195 b0ee250e94f001c775ab2bd7a682d450 544 PANTHER PTHR34597 2 544 6.0E-202 T 26-04-2016 PAM18_RS22195 b0ee250e94f001c775ab2bd7a682d450 544 Gene3D G3DSA:2.40.160.50 157 544 5.5E-68 T 26-04-2016 PAM18_RS08055 d16ba9260a3c6529cf5151beb1fb3802 113 Pfam PF07119 Protein of unknown function (DUF1375) 11 99 5.9E-21 T 26-04-2016 IPR010780 Protein of unknown function DUF1375 PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 PANTHER PTHR38434 18 570 6.4E-211 T 26-04-2016 PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 PANTHER PTHR38434 779 1201 6.4E-211 T 26-04-2016 PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 786 1188 1.5E-44 T 26-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 178 533 6.2E-106 T 26-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 PANTHER PTHR38434:SF1 18 570 6.4E-211 T 26-04-2016 PAM18_RS26730 e023471ce31ce0ae5363eaf607d0260b 1201 PANTHER PTHR38434:SF1 779 1201 6.4E-211 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SUPERFAMILY SSF55785 30 155 2.27E-12 T 26-04-2016 IPR000014 PAS domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SUPERFAMILY SSF47384 185 266 2.75E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 164 2.5E-10 T 26-04-2016 IPR000014 PAS domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SMART SM00388 202 267 2.2E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SMART SM00448 445 557 1.3E-8 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SUPERFAMILY SSF52172 445 562 6.4E-20 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Gene3D G3DSA:3.30.565.10 273 424 8.5E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Gene3D G3DSA:3.40.50.2300 446 562 2.7E-18 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SUPERFAMILY SSF55874 257 422 1.01E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 SMART SM00387 311 422 1.2E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 3.7E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 3.7E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 3.7E-10 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 420 1.3E-18 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Gene3D G3DSA:3.30.450.20 36 155 3.1E-13 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PANTHER PTHR24423:SF439 198 561 6.1E-129 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PANTHER PTHR24423:SF439 30 172 6.1E-129 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PANTHER PTHR24423 198 561 6.1E-129 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 PANTHER PTHR24423 30 172 6.1E-129 T 26-04-2016 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Pfam PF13188 PAS domain 44 100 2.6E-4 T 26-04-2016 IPR000014 PAS domain PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Pfam PF00072 Response regulator receiver domain 448 557 1.2E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS15650 3263cc0542dbb88ee73c480d45e56e8b 564 Gene3D G3DSA:1.10.287.130 195 263 6.5E-6 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 PANTHER PTHR36573 1 211 4.5E-82 T 26-04-2016 PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 PIRSF PIRSF004649 1 210 3.9E-59 T 26-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:1.10.10.640 169 205 1.5E-15 T 26-04-2016 IPR023094 Toluene tolerance protein, alpha-helical PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:1.10.10.640 70 111 1.5E-15 T 26-04-2016 IPR023094 Toluene tolerance protein, alpha-helical PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 Pfam PF05494 MlaC protein 33 196 2.7E-43 T 26-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:3.10.450.50 114 168 2.8E-24 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS23215 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:3.10.450.50 25 69 2.8E-24 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16295 bf78ea211c0a560525b583670b440deb 226 Gene3D G3DSA:1.10.3720.10 8 221 4.6E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16295 bf78ea211c0a560525b583670b440deb 226 SUPERFAMILY SSF161098 5 216 9.94E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16295 bf78ea211c0a560525b583670b440deb 226 PANTHER PTHR30183 1 222 2.0E-68 T 26-04-2016 PAM18_RS16295 bf78ea211c0a560525b583670b440deb 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 217 1.6E-71 T 26-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 PAM18_RS16295 bf78ea211c0a560525b583670b440deb 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 3.0E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28575 3c053cdb9414d0702265aa08eee9fd66 254 Pfam PF03741 Integral membrane protein TerC family 14 204 4.1E-51 T 26-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PAM18_RS28575 3c053cdb9414d0702265aa08eee9fd66 254 PANTHER PTHR30060:SF1 1 246 6.0E-129 T 26-04-2016 PAM18_RS28575 3c053cdb9414d0702265aa08eee9fd66 254 PANTHER PTHR30060 1 246 6.0E-129 T 26-04-2016 PAM18_RS06070 3b2e3244b27a94faf6b6e3fd2f7d0ec5 266 PANTHER PTHR38034 4 265 1.6E-97 T 26-04-2016 PAM18_RS06070 3b2e3244b27a94faf6b6e3fd2f7d0ec5 266 Pfam PF01578 Cytochrome C assembly protein 38 263 2.6E-41 T 26-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PAM18_RS06025 54029caa2f936d9ceb35701a7e186b61 166 Pfam PF03734 L,D-transpeptidase catalytic domain 31 164 1.2E-18 T 26-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PAM18_RS06025 54029caa2f936d9ceb35701a7e186b61 166 Gene3D G3DSA:2.40.440.10 29 165 7.1E-21 T 26-04-2016 PAM18_RS06025 54029caa2f936d9ceb35701a7e186b61 166 SUPERFAMILY SSF141523 30 165 4.19E-24 T 26-04-2016 PAM18_RS06025 54029caa2f936d9ceb35701a7e186b61 166 PANTHER PTHR36699 1 166 4.9E-72 T 26-04-2016 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56601 251 607 1.59E-102 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 1.3E-73 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.90.1310.10 131 249 4.3E-39 T 26-04-2016 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 PANTHER PTHR30627:SF2 5 645 5.5E-260 T 26-04-2016 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 PANTHER PTHR30627 5 645 5.5E-260 T 26-04-2016 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 7.9E-47 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.40.710.10 250 608 1.4E-110 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.7E-237 T 26-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 PAM18_RS04765 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56519 56 250 4.19E-53 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 SUPERFAMILY SSF48452 587 628 1.82E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 SUPERFAMILY SSF48452 661 723 1.82E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Gene3D G3DSA:1.25.40.10 589 622 1.3E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Gene3D G3DSA:1.25.40.10 657 717 1.3E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083:SF423 470 476 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083:SF423 590 727 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083:SF423 1055 1071 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083:SF423 492 520 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083:SF423 106 349 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Pfam PF14559 Tetratricopeptide repeat 61 100 1.1E-5 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 SUPERFAMILY SSF48452 56 92 9.11E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 SUPERFAMILY SSF48452 267 345 9.11E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Pfam PF13429 Tetratricopeptide repeat 452 727 5.5E-92 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Gene3D G3DSA:1.25.40.10 57 95 2.0E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Gene3D G3DSA:1.25.40.10 137 345 2.0E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 Gene3D G3DSA:1.25.40.10 394 544 5.1E-4 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083 470 476 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083 590 727 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083 1055 1071 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083 492 520 2.3E-137 T 26-04-2016 PAM18_RS09750 cc685280ce475eec952de0dca7b0e47e 1193 PANTHER PTHR23083 106 349 2.3E-137 T 26-04-2016 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 Gene3D G3DSA:2.40.128.10 26 130 5.6E-36 T 26-04-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 Pfam PF02974 Protease inhibitor Inh 31 128 2.7E-22 T 26-04-2016 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 SUPERFAMILY SSF50882 26 128 3.14E-26 T 26-04-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 PRINTS PR01274 Metalloprotease inhibitor signature 68 79 5.9E-17 T 26-04-2016 IPR022815 Protease inhibitor I38 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 PRINTS PR01274 Metalloprotease inhibitor signature 90 103 5.9E-17 T 26-04-2016 IPR022815 Protease inhibitor I38 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 PRINTS PR01274 Metalloprotease inhibitor signature 107 120 5.9E-17 T 26-04-2016 IPR022815 Protease inhibitor I38 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 PRINTS PR01274 Metalloprotease inhibitor signature 26 42 5.9E-17 T 26-04-2016 IPR022815 Protease inhibitor I38 PAM18_RS19335 e79b838ea0d203dad017608ba7d7a263 131 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 38 125 6.0E-35 T 26-04-2016 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 PAM18_RS21645 07ce552f720dc5b02999664c6ed6b7a1 203 PANTHER PTHR10108:SF714 32 185 3.8E-27 T 26-04-2016 PAM18_RS21645 07ce552f720dc5b02999664c6ed6b7a1 203 Gene3D G3DSA:3.40.50.150 29 186 1.8E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21645 07ce552f720dc5b02999664c6ed6b7a1 203 PANTHER PTHR10108 32 185 3.8E-27 T 26-04-2016 PAM18_RS21645 07ce552f720dc5b02999664c6ed6b7a1 203 Pfam PF13489 Methyltransferase domain 30 182 3.8E-19 T 26-04-2016 PAM18_RS21645 07ce552f720dc5b02999664c6ed6b7a1 203 SUPERFAMILY SSF53335 31 199 1.16E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.968 T 26-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 Gene3D G3DSA:3.40.640.10 61 303 2.3E-89 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.6E-214 T 26-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 400 1.8E-151 T 26-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 SUPERFAMILY SSF53383 16 402 9.71E-127 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 Pfam PF00202 Aminotransferase class-III 20 400 5.5E-124 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 Gene3D G3DSA:3.90.1150.10 307 402 6.4E-35 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 Gene3D G3DSA:3.90.1150.10 14 60 6.4E-35 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 PANTHER PTHR11986:SF71 12 404 7.3E-214 T 26-04-2016 PAM18_RS21170 44e1c20b3342c3d8cc0c4f43519013a2 406 PANTHER PTHR11986 12 404 7.3E-214 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS19825 335c5b74adee25e4a9fdbb7f2f4bafd5 184 PANTHER PTHR36180 81 175 9.4E-34 T 26-04-2016 PAM18_RS19825 335c5b74adee25e4a9fdbb7f2f4bafd5 184 PANTHER PTHR36180 1 52 9.4E-34 T 26-04-2016 PAM18_RS19825 335c5b74adee25e4a9fdbb7f2f4bafd5 184 PANTHER PTHR36180:SF2 81 175 9.4E-34 T 26-04-2016 PAM18_RS19825 335c5b74adee25e4a9fdbb7f2f4bafd5 184 PANTHER PTHR36180:SF2 1 52 9.4E-34 T 26-04-2016 PAM18_RS19825 335c5b74adee25e4a9fdbb7f2f4bafd5 184 SMART SM01040 17 131 2.3E-15 T 26-04-2016 IPR003497 BRO N-terminal domain PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 Gene3D G3DSA:1.10.10.60 287 338 3.7E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 SUPERFAMILY SSF46689 287 337 1.43E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 Pfam PF12833 Helix-turn-helix domain 258 336 1.4E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 PANTHER PTHR11019:SF52 121 342 1.4E-88 T 26-04-2016 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 208 3.7E-52 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 SMART SM00342 252 334 2.0E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 Gene3D G3DSA:1.10.10.60 243 274 4.6E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 PANTHER PTHR11019 121 342 1.4E-88 T 26-04-2016 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 5.7E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09935 a995457d75522bbfe50900eee2985fe7 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 5.7E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 SUPERFAMILY SSF103473 5 399 1.24E-30 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 PANTHER PTHR12778 1 402 1.3E-239 T 26-04-2016 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 Gene3D G3DSA:1.20.1250.20 8 197 3.6E-11 T 26-04-2016 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 Gene3D G3DSA:1.20.1250.20 217 399 7.7E-4 T 26-04-2016 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 PANTHER PTHR12778:SF11 1 402 1.3E-239 T 26-04-2016 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 Pfam PF13000 Acetyl-coenzyme A transporter 1 14 93 1.6E-19 T 26-04-2016 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 PAM18_RS03680 f1ea783aa564f90a2f44158b14f9a056 414 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 9 398 3.2E-208 T 26-04-2016 IPR014090 Siderophore transporter, RhtX/FptX family PAM18_RS21270 7d40715e7235871db2090a7ec033d8f6 721 PANTHER PTHR30509:SF6 340 680 0.0 T 26-04-2016 PAM18_RS21270 7d40715e7235871db2090a7ec033d8f6 721 Pfam PF04632 Fusaric acid resistance protein family 30 714 9.9E-210 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS21270 7d40715e7235871db2090a7ec033d8f6 721 PANTHER PTHR30509 340 680 0.0 T 26-04-2016 PAM18_RS21270 7d40715e7235871db2090a7ec033d8f6 721 PANTHER PTHR30509 7 267 0.0 T 26-04-2016 PAM18_RS21270 7d40715e7235871db2090a7ec033d8f6 721 PANTHER PTHR30509:SF6 7 267 0.0 T 26-04-2016 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF12833 Helix-turn-helix domain 238 319 3.1E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 SMART SM00342 232 317 1.8E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 216 265 2.42E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 Gene3D G3DSA:1.10.10.60 218 267 1.1E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF14525 AraC-binding-like domain 26 199 7.7E-14 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 313 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 9.5E-8 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 9.5E-8 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 PANTHER PTHR11019 84 319 1.4E-41 T 26-04-2016 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 PANTHER PTHR11019:SF50 84 319 1.4E-41 T 26-04-2016 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 Gene3D G3DSA:1.10.10.60 268 318 1.5E-18 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS04310 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 267 318 7.94E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Gene3D G3DSA:1.20.1600.10 51 91 2.5E-88 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Gene3D G3DSA:1.20.1600.10 357 470 2.5E-88 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Gene3D G3DSA:1.20.1600.10 145 317 2.5E-88 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Gene3D G3DSA:2.20.200.10 102 144 5.3E-15 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Gene3D G3DSA:2.20.200.10 318 355 5.3E-15 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 470 4.4E-112 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Pfam PF02321 Outer membrane efflux protein 65 257 1.4E-19 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 Pfam PF02321 Outer membrane efflux protein 283 468 3.4E-23 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 SUPERFAMILY SSF56954 56 470 2.35E-95 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 SUPERFAMILY SSF56954 6 32 2.35E-95 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 PANTHER PTHR30203 2 489 1.2E-206 T 26-04-2016 PAM18_RS05310 43196ac57ac49b39ce6167447cca5c75 496 PANTHER PTHR30203:SF3 2 489 1.2E-206 T 26-04-2016 PAM18_RS23505 9e53401fb256fb609d47f9f342b39e02 251 PANTHER PTHR30292:SF0 4 249 3.9E-123 T 26-04-2016 PAM18_RS23505 9e53401fb256fb609d47f9f342b39e02 251 SUPERFAMILY SSF88713 7 249 4.22E-90 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS23505 9e53401fb256fb609d47f9f342b39e02 251 Pfam PF03746 LamB/YcsF family 8 249 1.4E-93 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS23505 9e53401fb256fb609d47f9f342b39e02 251 PANTHER PTHR30292 4 249 3.9E-123 T 26-04-2016 PAM18_RS23505 9e53401fb256fb609d47f9f342b39e02 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 42.672 T 26-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAM18_RS28015 8e45ca884d6d797964edce40de3682a4 300 SUPERFAMILY SSF52172 1 132 6.26E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS28015 8e45ca884d6d797964edce40de3682a4 300 Gene3D G3DSA:3.40.50.2300 2 134 2.7E-38 T 26-04-2016 PAM18_RS28015 8e45ca884d6d797964edce40de3682a4 300 Pfam PF00072 Response regulator receiver domain 7 120 4.9E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS28015 8e45ca884d6d797964edce40de3682a4 300 PANTHER PTHR26402 4 125 2.6E-39 T 26-04-2016 PAM18_RS28015 8e45ca884d6d797964edce40de3682a4 300 SMART SM00448 4 119 9.1E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.983 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 Pfam PF01084 Ribosomal protein S18 18 68 2.4E-25 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 SUPERFAMILY SSF46911 3 74 2.62E-29 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 Gene3D G3DSA:4.10.640.10 8 74 5.3E-33 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 26-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 PANTHER PTHR13479 2 76 1.2E-31 T 26-04-2016 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.9E-18 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.9E-18 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.9E-18 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.9E-18 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS25815 dbfded01c87925bee7d1bff9987c6438 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.5E-37 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 Hamap MF_00970 Ribonuclease E [rne]. 1 1045 39.565 T 26-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 Pfam PF00575 S1 RNA binding domain 36 116 6.1E-15 T 26-04-2016 IPR003029 S1 domain GO:0003676 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 Gene3D G3DSA:2.40.50.140 31 123 1.4E-34 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 Pfam PF10150 Ribonuclease E/G family 119 388 7.0E-96 T 26-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 PANTHER PTHR30001:SF1 1 840 0.0 T 26-04-2016 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 SUPERFAMILY SSF50249 40 123 6.5E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 PANTHER PTHR30001 1 840 0.0 T 26-04-2016 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 1.8E-167 T 26-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PAM18_RS10195 1aaff24df41c557ad8c9d4bd752cae60 1057 SMART SM00316 37 117 7.7E-13 T 26-04-2016 IPR022967 RNA-binding domain, S1 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Pfam PF01266 FAD dependent oxidoreductase 5 347 6.0E-45 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 PANTHER PTHR13847:SF206 2 360 6.3E-72 T 26-04-2016 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Gene3D G3DSA:3.50.50.60 138 215 6.9E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Gene3D G3DSA:3.50.50.60 309 355 6.9E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Gene3D G3DSA:3.50.50.60 3 80 6.9E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Gene3D G3DSA:3.30.9.10 96 137 1.1E-9 T 26-04-2016 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 Gene3D G3DSA:3.30.9.10 216 271 1.1E-9 T 26-04-2016 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 PANTHER PTHR13847 2 360 6.3E-72 T 26-04-2016 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 SUPERFAMILY SSF51905 4 216 1.0E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS05455 91a66114ff4ef28656d5688d0fa67f31 375 SUPERFAMILY SSF51905 309 357 1.0E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.4E-6 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 PRINTS PR00173 Glutamate-aspartate symporter signature 253 272 1.4E-6 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.4E-6 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.4E-6 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 Pfam PF03553 Na+/H+ antiporter family 151 435 5.1E-77 T 26-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 PANTHER PTHR37821 1 441 5.7E-201 T 26-04-2016 PAM18_RS11925 c19057820b6b7d7b54e26dc01cf75402 441 Pfam PF13726 Na+-H+ antiporter family 2 88 4.7E-32 T 26-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 534 2.6E-166 T 26-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 16 214 3.7E-13 T 26-04-2016 PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 SUPERFAMILY SSF103473 12 220 8.5E-20 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 SUPERFAMILY SSF103473 355 579 8.5E-20 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 PANTHER PTHR12778 19 215 6.7E-97 T 26-04-2016 PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 PANTHER PTHR12778 344 573 6.7E-97 T 26-04-2016 PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 382 577 1.3E-7 T 26-04-2016 PAM18_RS22915 e125440435a4fea631adba9b7284e34a 594 Pfam PF13000 Acetyl-coenzyme A transporter 1 21 107 2.8E-7 T 26-04-2016 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 754 1.3E-7 T 26-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PANTHER PTHR10046:SF46 94 761 6.9E-150 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 Gene3D G3DSA:3.30.230.10 558 756 5.0E-30 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PANTHER PTHR10046 94 761 6.9E-150 T 26-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 Gene3D G3DSA:3.40.50.300 35 97 2.0E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 Gene3D G3DSA:3.40.50.300 305 393 2.0E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 SUPERFAMILY SSF54211 565 757 3.07E-34 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 Pfam PF13654 AAA domain 30 540 2.5E-179 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 725 6.1E-13 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 6.1E-13 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 6.1E-13 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 6.1E-13 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 66 85 6.1E-13 T 26-04-2016 PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 SUPERFAMILY SSF52540 35 109 9.58E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23860 acc066799666f6d978a69d1217f3d5e6 817 SUPERFAMILY SSF52540 313 536 9.58E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06485 debf32992ec1716447ad0b878e3a12f6 207 PANTHER PTHR30086:SF4 1 207 6.7E-121 T 26-04-2016 PAM18_RS06485 debf32992ec1716447ad0b878e3a12f6 207 PIRSF PIRSF006324 1 205 5.0E-49 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS06485 debf32992ec1716447ad0b878e3a12f6 207 Pfam PF01810 LysE type translocator 14 203 3.6E-26 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS06485 debf32992ec1716447ad0b878e3a12f6 207 PANTHER PTHR30086 1 207 6.7E-121 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS01520 6a16a763926a27df7b16c4098fbdf5b5 289 SUPERFAMILY SSF161098 3 261 3.36E-50 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01520 6a16a763926a27df7b16c4098fbdf5b5 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 262 9.5E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01520 6a16a763926a27df7b16c4098fbdf5b5 289 Gene3D G3DSA:1.10.3720.10 2 266 5.2E-56 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01520 6a16a763926a27df7b16c4098fbdf5b5 289 PANTHER PTHR30222 1 275 6.9E-84 T 26-04-2016 PAM18_RS01520 6a16a763926a27df7b16c4098fbdf5b5 289 PANTHER PTHR30222:SF1 1 275 6.9E-84 T 26-04-2016 PAM18_RS00620 ec181c893c4c612a8c89fbe4a7af21e8 136 PIRSF PIRSF007951 1 136 6.9E-61 T 26-04-2016 IPR009413 Hemolysin, aegerolysin type GO:0019836 PAM18_RS00620 ec181c893c4c612a8c89fbe4a7af21e8 136 Pfam PF06355 Aegerolysin 4 134 3.3E-44 T 26-04-2016 IPR009413 Hemolysin, aegerolysin type GO:0019836 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 44.866 T 26-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 Pfam PF00221 Aromatic amino acid lyase 10 469 3.9E-185 T 26-04-2016 IPR001106 Aromatic amino acid lyase PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 Gene3D G3DSA:1.10.275.10 3 196 1.5E-72 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 Gene3D G3DSA:1.20.200.10 197 502 1.2E-129 T 26-04-2016 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 SUPERFAMILY SSF48557 3 505 4.08E-191 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 26-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 PANTHER PTHR10362 5 495 8.6E-256 T 26-04-2016 PAM18_RS26650 a233ba3c2ce61af3b32db969d8c03969 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 507 1.8E-219 T 26-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 53.753 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-16 T 26-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PANTHER PTHR23359 1 215 1.3E-110 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF00406 Adenylate kinase 5 185 1.2E-56 T 26-04-2016 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 Gene3D G3DSA:3.40.50.300 1 213 2.3E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 4 17 5.1E-36 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 32 46 5.1E-36 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 173 187 5.1E-36 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 81 97 5.1E-36 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 156 171 5.1E-36 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 1.5E-77 T 26-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 PAM18_RS06380 f0dc0c5191739deb9736065f8027b3d9 215 SUPERFAMILY SSF52540 1 212 1.01E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS12505 605ec4d2e3613515311821b2642f0ba3 302 Gene3D G3DSA:3.90.320.10 13 187 1.8E-24 T 26-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 PAM18_RS12505 605ec4d2e3613515311821b2642f0ba3 302 SUPERFAMILY SSF52980 12 188 2.09E-27 T 26-04-2016 IPR011335 Restriction endonuclease type II-like PAM18_RS12505 605ec4d2e3613515311821b2642f0ba3 302 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 4.1E-16 T 26-04-2016 IPR019080 YqaJ viral recombinase PAM18_RS12505 605ec4d2e3613515311821b2642f0ba3 302 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 13 157 1.2E-23 T 26-04-2016 IPR017482 Putative phage-type endonuclease PAM18_RS07880 ad1fd0cd594759a79383270f16b315c4 129 PANTHER PTHR33931:SF3 1 129 3.8E-65 T 26-04-2016 PAM18_RS07880 ad1fd0cd594759a79383270f16b315c4 129 Pfam PF03788 LrgA family 23 115 1.7E-24 T 26-04-2016 IPR005538 LrgA/CidA family GO:0016021 PAM18_RS07880 ad1fd0cd594759a79383270f16b315c4 129 PANTHER PTHR33931 1 129 3.8E-65 T 26-04-2016 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 2.2E-16 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 Gene3D G3DSA:3.40.1190.20 12 313 1.1E-64 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 PANTHER PTHR10584:SF159 1 339 2.1E-145 T 26-04-2016 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.3E-65 T 26-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 473 43.397 T 26-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 Gene3D G3DSA:3.40.50.620 339 457 2.0E-37 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 Pfam PF01467 Cytidylyltransferase-like 344 434 3.1E-16 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 Pfam PF00294 pfkB family carbohydrate kinase 13 304 9.8E-49 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 311 3.8E-126 T 26-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 SUPERFAMILY SSF53613 12 309 1.56E-58 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 PANTHER PTHR10584 1 339 2.1E-145 T 26-04-2016 PAM18_RS26145 b5417c68102ad35df6bbdef649c53502 473 SUPERFAMILY SSF52374 342 472 9.78E-25 T 26-04-2016 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 SMART SM01207 7 182 2.0E-81 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 PANTHER PTHR30309:SF0 1 189 1.3E-75 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 187 4.5E-54 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 189 18.694 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 PANTHER PTHR30309 1 189 1.3E-75 T 26-04-2016 PAM18_RS02945 2e1fcd53e49088747aaa1ccf741ea3ab 189 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 181 3.4E-53 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 PAM18_RS12010 6ab86feb224a51179bda043ce2ef2b5a 137 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 20.119 T 26-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PAM18_RS12010 6ab86feb224a51179bda043ce2ef2b5a 137 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 1.1E-33 T 26-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PAM18_RS12010 6ab86feb224a51179bda043ce2ef2b5a 137 PANTHER PTHR11058 1 127 3.6E-68 T 26-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PAM18_RS12010 6ab86feb224a51179bda043ce2ef2b5a 137 PANTHER PTHR11058:SF5 1 127 3.6E-68 T 26-04-2016 PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 Pfam PF00266 Aminotransferase class-V 34 401 5.3E-30 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 PANTHER PTHR11601 19 410 1.1E-171 T 26-04-2016 PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 PANTHER PTHR11601:SF42 19 410 1.1E-171 T 26-04-2016 PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 Gene3D G3DSA:3.40.640.10 52 290 4.0E-37 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 Gene3D G3DSA:3.90.1150.10 291 408 1.2E-23 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS21570 168db0a298264c8d6736c9525b113daa 415 SUPERFAMILY SSF53383 17 411 2.24E-56 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 Gene3D G3DSA:1.10.10.60 297 345 3.2E-6 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 SMART SM00382 49 192 6.9E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 Gene3D G3DSA:1.10.8.60 202 271 2.5E-24 T 26-04-2016 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 PANTHER PTHR32071 30 367 3.4E-150 T 26-04-2016 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 SUPERFAMILY SSF46689 242 350 6.27E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 PANTHER PTHR32071:SF15 30 367 3.4E-150 T 26-04-2016 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 Gene3D G3DSA:3.40.50.300 31 201 6.5E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 53 66 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 115 130 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 SUPERFAMILY SSF52540 33 270 2.95E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 Pfam PF00158 Sigma-54 interaction domain 32 195 2.1E-69 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS13820 451a560615bba954f0af31adc7015f66 376 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 242 251 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 SUPERFAMILY SSF52096 3 269 5.15E-79 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 PANTHER PTHR11941:SF43 3 268 1.7E-138 T 26-04-2016 PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 270 3.9E-46 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:3.90.226.10 4 211 5.8E-64 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 PANTHER PTHR11941 3 268 1.7E-138 T 26-04-2016 PAM18_RS16510 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:1.10.12.10 212 270 4.1E-29 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 Pfam PF13692 Glycosyl transferases group 1 196 306 2.7E-9 T 26-04-2016 PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 PANTHER PTHR12526:SF397 60 92 1.2E-15 T 26-04-2016 PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 PANTHER PTHR12526:SF397 111 328 1.2E-15 T 26-04-2016 PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 SUPERFAMILY SSF53756 47 335 4.92E-30 T 26-04-2016 PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 PANTHER PTHR12526 60 92 1.2E-15 T 26-04-2016 PAM18_RS09305 73ceeeec24a6f963e4282fdbfd2a4749 348 PANTHER PTHR12526 111 328 1.2E-15 T 26-04-2016 PAM18_RS22185 967aca3d48e21703f991f1645a7dd62c 139 PANTHER PTHR30558:SF10 11 139 7.1E-54 T 26-04-2016 PAM18_RS22185 967aca3d48e21703f991f1645a7dd62c 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 136 1.1E-28 T 26-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PAM18_RS22185 967aca3d48e21703f991f1645a7dd62c 139 PANTHER PTHR30558 11 139 7.1E-54 T 26-04-2016 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 3.4E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 PANTHER PTHR30328 9 94 1.4E-20 T 26-04-2016 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.4E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.4E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 SUPERFAMILY SSF46689 2 81 5.64E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 PANTHER PTHR30328:SF23 9 94 1.4E-20 T 26-04-2016 PAM18_RS19160 8b8f7988be3d856073433c98b90b5ea8 186 Gene3D G3DSA:1.10.357.10 6 182 2.4E-28 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 Pfam PF00072 Response regulator receiver domain 17 126 3.6E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 SMART SM00448 15 127 1.6E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 Pfam PF13487 HD domain 263 322 1.4E-17 T 26-04-2016 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 PANTHER PTHR26402:SF515 15 369 7.5E-95 T 26-04-2016 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 SUPERFAMILY SSF109604 226 377 2.51E-11 T 26-04-2016 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 SUPERFAMILY SSF52172 15 179 5.27E-37 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 Gene3D G3DSA:3.40.50.2300 16 147 2.5E-34 T 26-04-2016 PAM18_RS12440 0753fed3351654e26cbc3e452f3e1a94 447 PANTHER PTHR26402 15 369 7.5E-95 T 26-04-2016 PAM18_RS09760 3b220e78762ab3714e564c91a3881d85 455 SUPERFAMILY SSF55781 181 313 1.53E-8 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS09760 3b220e78762ab3714e564c91a3881d85 455 Pfam PF13492 GAF domain 181 304 1.6E-7 T 26-04-2016 IPR003018 GAF domain GO:0005515 PAM18_RS09760 3b220e78762ab3714e564c91a3881d85 455 Pfam PF16963 PelD GGDEF domain 321 444 3.5E-35 T 26-04-2016 IPR031583 PelD, GGDEF domain PAM18_RS09760 3b220e78762ab3714e564c91a3881d85 455 Gene3D G3DSA:3.30.450.40 159 308 2.1E-7 T 26-04-2016 IPR029016 GAF domain-like PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 Gene3D G3DSA:3.40.190.10 123 222 9.6E-5 T 26-04-2016 PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 322 2.1E-24 T 26-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 PANTHER PTHR30349 1 286 3.2E-207 T 26-04-2016 PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 SUPERFAMILY SSF53850 59 275 2.67E-11 T 26-04-2016 PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 PIRSF PIRSF017082 1 325 4.3E-81 T 26-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PAM18_RS21875 f2f5d9f57582ebf76b6bad46c64d2761 325 PANTHER PTHR30349:SF29 1 286 3.2E-207 T 26-04-2016 PAM18_RS05275 789e178079227d478f21961569a277d9 784 PANTHER PTHR30442 1 781 5.0E-176 T 26-04-2016 PAM18_RS05275 789e178079227d478f21961569a277d9 784 Pfam PF07660 Secretin and TonB N terminus short domain 64 113 2.2E-9 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS05275 789e178079227d478f21961569a277d9 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS05275 789e178079227d478f21961569a277d9 784 SUPERFAMILY SSF56935 126 784 5.09E-119 T 26-04-2016 PAM18_RS05275 789e178079227d478f21961569a277d9 784 Pfam PF00593 TonB dependent receptor 535 781 3.4E-30 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS05275 789e178079227d478f21961569a277d9 784 Gene3D G3DSA:2.40.170.20 256 784 6.5E-116 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS05275 789e178079227d478f21961569a277d9 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 254 1.4E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS05275 789e178079227d478f21961569a277d9 784 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 784 6.5E-125 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS05275 789e178079227d478f21961569a277d9 784 Gene3D G3DSA:2.170.130.10 140 255 3.8E-29 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS05275 789e178079227d478f21961569a277d9 784 SMART SM00965 63 114 9.5E-14 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 PANTHER PTHR11941:SF45 1 260 2.7E-88 T 26-04-2016 PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 1.3E-50 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 SUPERFAMILY SSF52096 3 263 2.49E-76 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 Gene3D G3DSA:3.90.226.10 7 204 2.4E-59 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 Gene3D G3DSA:1.10.12.10 205 263 1.2E-17 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 PANTHER PTHR11941 1 260 2.7E-88 T 26-04-2016 PAM18_RS26055 bc559dc338c1d90c805c5e2b6f5bea58 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS13605 ced6dfd8883dcbd4c95b20cb8aa13b30 275 SUPERFAMILY SSF53328 123 274 1.31E-16 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS13605 ced6dfd8883dcbd4c95b20cb8aa13b30 275 SUPERFAMILY SSF53328 47 93 1.31E-16 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS13605 ced6dfd8883dcbd4c95b20cb8aa13b30 275 Gene3D G3DSA:3.40.50.170 38 252 7.7E-20 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS13605 ced6dfd8883dcbd4c95b20cb8aa13b30 275 Pfam PF00551 Formyl transferase 121 251 5.6E-5 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 Gene3D G3DSA:3.40.50.300 1 162 7.6E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 Gene3D G3DSA:3.40.50.300 232 341 7.6E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 PANTHER PTHR32182 1 365 3.7E-66 T 26-04-2016 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 7.5E-33 T 26-04-2016 IPR003395 RecF/RecN/SMC, N-terminal PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 SUPERFAMILY SSF52540 1 234 6.81E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 SUPERFAMILY SSF52540 261 342 6.81E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 PANTHER PTHR32182:SF0 1 365 3.7E-66 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 26-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 369 95.384 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 2.4E-115 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PAM18_RS00015 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 26-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 PANTHER PTHR10587 328 592 3.0E-96 T 26-04-2016 PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 PANTHER PTHR10587:SF64 328 592 3.0E-96 T 26-04-2016 PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 SUPERFAMILY SSF51445 39 302 1.38E-54 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 Pfam PF13641 Glycosyltransferase like family 2 421 649 2.8E-34 T 26-04-2016 PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 Gene3D G3DSA:3.90.550.10 421 664 9.9E-32 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 SUPERFAMILY SSF53448 405 662 2.1E-50 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 223 236 - T 26-04-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 PAM18_RS19775 fca97c6bd62a9aa92c6ebf54a468b86a 869 Gene3D G3DSA:3.20.20.80 53 302 5.0E-33 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 Gene3D G3DSA:1.20.1600.10 30 405 1.3E-49 T 26-04-2016 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 SUPERFAMILY SSF56954 15 413 5.36E-66 T 26-04-2016 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 Pfam PF02321 Outer membrane efflux protein 35 211 2.6E-22 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 Pfam PF02321 Outer membrane efflux protein 245 401 2.0E-17 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 PANTHER PTHR30026 1 423 2.3E-113 T 26-04-2016 PAM18_RS16225 33e5ccab9ea1bb0b2c20fb0b5413a9c2 425 PANTHER PTHR30026:SF4 1 423 2.3E-113 T 26-04-2016 PAM18_RS19020 d018d103eedae0630225b27772bf2b9d 393 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 379 1.6E-127 T 26-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB PAM18_RS19020 d018d103eedae0630225b27772bf2b9d 393 PANTHER PTHR23537 1 391 8.1E-116 T 26-04-2016 PAM18_RS19020 d018d103eedae0630225b27772bf2b9d 393 SUPERFAMILY SSF103473 9 379 6.02E-23 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS19020 d018d103eedae0630225b27772bf2b9d 393 PANTHER PTHR23537:SF1 1 391 8.1E-116 T 26-04-2016 PAM18_RS19020 d018d103eedae0630225b27772bf2b9d 393 Gene3D G3DSA:1.20.1250.20 14 186 3.6E-10 T 26-04-2016 PAM18_RS16710 e09c8ce7ff404370850209cb3630360c 155 PANTHER PTHR35175 1 76 1.6E-30 T 26-04-2016 PAM18_RS16710 e09c8ce7ff404370850209cb3630360c 155 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 3.5E-15 T 26-04-2016 IPR010710 Protein of unknown function DUF1289 PAM18_RS16710 e09c8ce7ff404370850209cb3630360c 155 PANTHER PTHR35175:SF2 1 76 1.6E-30 T 26-04-2016 PAM18_RS00735 c2441f4ef44748b7b61bb2d8ea9fa0ab 171 PANTHER PTHR15364 4 170 8.9E-90 T 26-04-2016 PAM18_RS00735 c2441f4ef44748b7b61bb2d8ea9fa0ab 171 SUPERFAMILY SSF52309 1 156 7.1E-45 T 26-04-2016 PAM18_RS00735 c2441f4ef44748b7b61bb2d8ea9fa0ab 171 Gene3D G3DSA:3.40.50.1810 2 107 8.9E-23 T 26-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 PAM18_RS00735 c2441f4ef44748b7b61bb2d8ea9fa0ab 171 PANTHER PTHR15364:SF1 4 170 8.9E-90 T 26-04-2016 PAM18_RS00735 c2441f4ef44748b7b61bb2d8ea9fa0ab 171 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 145 1.8E-48 T 26-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 PANTHER PTHR11046:SF1 1 180 1.2E-123 T 26-04-2016 PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 SMART SM00479 6 179 1.1E-22 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 PANTHER PTHR11046 1 180 1.2E-123 T 26-04-2016 PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 Pfam PF00929 Exonuclease 8 169 4.7E-34 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 Gene3D G3DSA:3.30.420.10 3 179 6.8E-76 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 SUPERFAMILY SSF53098 2 179 2.74E-49 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS25910 46c633bf861e7f7d8e0094dc66c1697e 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 44.191 T 26-04-2016 IPR022894 Oligoribonuclease GO:0016788 PAM18_RS20420 7795a7f3cfcbb6d44dabbd5d3d0e01d2 749 SUPERFAMILY SSF51445 379 706 4.27E-33 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS20420 7795a7f3cfcbb6d44dabbd5d3d0e01d2 749 Gene3D G3DSA:3.20.20.80 416 713 7.5E-28 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 Gene3D G3DSA:1.20.1250.20 7 193 5.0E-23 T 26-04-2016 PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 Gene3D G3DSA:1.20.1250.20 256 433 1.5E-15 T 26-04-2016 PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 SUPERFAMILY SSF103473 239 440 3.92E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 SUPERFAMILY SSF103473 6 188 3.92E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 PANTHER PTHR23501 5 451 1.1E-297 T 26-04-2016 PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 PANTHER PTHR23501:SF38 5 451 1.1E-297 T 26-04-2016 PAM18_RS18380 dad67ad287a72abf220f2d6c31f460e9 452 Pfam PF07690 Major Facilitator Superfamily 12 401 3.6E-39 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS17435 fb5856cd480c013d3b446b492a391e4a 135 Pfam PF16985 Domain of unknown function (DUF5086) 5 133 3.2E-61 T 26-04-2016 IPR031561 Protein of unknown function DUF5086 PAM18_RS14715 6369f3d74099dcc5b75edc360bd907f7 116 Pfam PF11127 Protein of unknown function (DUF2892) 15 70 8.7E-8 T 26-04-2016 IPR021309 Protein of unknown function DUF2892 PAM18_RS15685 ab45df705a6b534b13f96ce0b22ae178 23 Pfam PF08042 PqqA family 1 19 3.2E-11 T 26-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 PAM18_RS15685 ab45df705a6b534b13f96ce0b22ae178 23 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 1 23 11.953 T 26-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 PAM18_RS15685 ab45df705a6b534b13f96ce0b22ae178 23 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 2 22 4.4E-13 T 26-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PANTHER PTHR30413 1 259 2.7E-151 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 Pfam PF01061 ABC-2 type transporter 13 221 1.1E-39 T 26-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 5.6E-9 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 5.6E-9 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.6E-9 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PIRSF PIRSF006648 2 255 2.3E-23 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11045 8da68280db29d6ea4e027614dae648af 259 PANTHER PTHR30413:SF2 1 259 2.7E-151 T 26-04-2016 PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 PANTHER PTHR24220 3 222 3.1E-117 T 26-04-2016 PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 SUPERFAMILY SSF52540 1 218 1.06E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 PANTHER PTHR24220:SF470 3 222 3.1E-117 T 26-04-2016 PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 Pfam PF00005 ABC transporter 18 165 1.1E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 Gene3D G3DSA:3.40.50.300 1 219 7.6E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 SMART SM00382 27 214 6.8E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS01890 9433f0a69551f271c5f8d5c3721884fc 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.0E-85 T 26-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 Pfam PF00313 'Cold-shock' DNA-binding domain 7 68 1.3E-27 T 26-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 PIRSF PIRSF002599 1 69 1.1E-22 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 SUPERFAMILY SSF50249 4 67 3.81E-24 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 Gene3D G3DSA:2.40.50.140 6 67 4.3E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 PANTHER PTHR11544 1 69 2.9E-35 T 26-04-2016 PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 26-04-2016 IPR019844 Cold-shock conserved site PAM18_RS19795 25b3f7c5ef66f67e18093a542955f7de 69 SMART SM00357 6 69 2.3E-26 T 26-04-2016 IPR011129 Cold shock protein GO:0003676 PAM18_RS08165 d5968bc52707319b0307afbbf34cdb30 294 PIRSF PIRSF011468 5 294 1.3E-158 T 26-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 PAM18_RS08165 d5968bc52707319b0307afbbf34cdb30 294 Pfam PF06007 Phosphonate metabolism protein PhnJ 14 284 4.5E-145 T 26-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 429 38.22 T 26-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 SUPERFAMILY SSF118215 10 402 1.03E-122 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PANTHER PTHR11958 6 418 1.2E-264 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 Gene3D G3DSA:1.10.3860.10 4 407 7.5E-123 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 1.1E-116 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PANTHER PTHR11958:SF49 6 418 1.2E-264 T 26-04-2016 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 26-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS19675 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 3.2E-28 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 9 149 2.0E-74 T 26-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 Gene3D G3DSA:1.10.1660.10 64 142 1.7E-14 T 26-04-2016 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 2.9E-13 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 2.9E-13 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 2.9E-13 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 PANTHER PTHR30204:SF0 2 138 7.2E-81 T 26-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 PANTHER PTHR30204 2 138 7.2E-81 T 26-04-2016 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 SMART SM00422 10 78 3.8E-28 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 Gene3D G3DSA:1.10.1660.10 9 63 3.3E-20 T 26-04-2016 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 SUPERFAMILY SSF46955 10 132 3.0E-28 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF09278 MerR, DNA binding 52 117 7.9E-16 T 26-04-2016 IPR015358 Transcription regulator MerR, DNA binding PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS14220 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF00376 MerR family regulatory protein 11 47 2.1E-12 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 SUPERFAMILY SSF52833 1 194 1.06E-47 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 PANTHER PTHR13887:SF22 1 193 3.4E-99 T 26-04-2016 PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 Gene3D G3DSA:3.40.30.10 1 194 2.6E-64 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 PANTHER PTHR13887 1 193 3.4E-99 T 26-04-2016 PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 PIRSF PIRSF006386 1 195 2.9E-68 T 26-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa PAM18_RS00600 2692738787bbf84bd93535310e8355b6 195 Pfam PF01323 DSBA-like thioredoxin domain 4 194 6.8E-45 T 26-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PAM18_RS25130 e5536a46bc9d43a295388672cb06e7ce 266 PANTHER PTHR10108 57 166 4.3E-23 T 26-04-2016 PAM18_RS25130 e5536a46bc9d43a295388672cb06e7ce 266 Gene3D G3DSA:3.40.50.150 57 244 7.8E-23 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25130 e5536a46bc9d43a295388672cb06e7ce 266 SUPERFAMILY SSF53335 54 249 3.59E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25130 e5536a46bc9d43a295388672cb06e7ce 266 Pfam PF08241 Methyltransferase domain 63 160 6.4E-15 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS25130 e5536a46bc9d43a295388672cb06e7ce 266 PANTHER PTHR10108:SF820 57 166 4.3E-23 T 26-04-2016 PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 SUPERFAMILY SSF55729 5 148 6.92E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 PANTHER PTHR23091 1 148 1.8E-39 T 26-04-2016 PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 Gene3D G3DSA:3.40.630.30 5 148 3.5E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 Pfam PF13673 Acetyltransferase (GNAT) domain 40 128 6.5E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 2.5E-48 T 26-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 PAM18_RS24475 e2a8ef443277e3c2811f12804e369e0c 150 PANTHER PTHR23091:SF247 1 148 1.8E-39 T 26-04-2016 PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 Pfam PF03061 Thioesterase superfamily 44 119 5.8E-22 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 126 4.1E-23 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 PANTHER PTHR12418 14 126 3.3E-42 T 26-04-2016 PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 PANTHER PTHR12418:SF27 14 126 3.3E-42 T 26-04-2016 PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 SUPERFAMILY SSF54637 10 128 1.39E-35 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27200 fecfd159afe09260cc85e26e548bc568 129 Gene3D G3DSA:3.10.129.10 12 127 3.6E-39 T 26-04-2016 IPR029069 HotDog domain PAM18_RS23755 b5f74af4777f1d7a73950582e00eb5ca 115 Pfam PF14481 Type 4 fimbrial biogenesis protein PilY2 1 115 1.3E-81 T 26-04-2016 IPR029497 Type 4 fimbrial biogenesis protein PilY2 PAM18_RS22590 cfed172713afb8b5c1baf87a1bf6cf3e 257 PANTHER PTHR11941 3 253 4.0E-106 T 26-04-2016 PAM18_RS22590 cfed172713afb8b5c1baf87a1bf6cf3e 257 PANTHER PTHR11941:SF17 3 253 4.0E-106 T 26-04-2016 PAM18_RS22590 cfed172713afb8b5c1baf87a1bf6cf3e 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 254 2.7E-49 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS22590 cfed172713afb8b5c1baf87a1bf6cf3e 257 SUPERFAMILY SSF52096 1 254 5.83E-71 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS22590 cfed172713afb8b5c1baf87a1bf6cf3e 257 Gene3D G3DSA:3.90.226.10 2 253 6.2E-72 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21285 015b627f018491587b501660e9e43440 262 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 229 5.7E-47 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 9 254 2.1E-134 T 26-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 PAM18_RS21285 015b627f018491587b501660e9e43440 262 Gene3D G3DSA:1.10.800.10 3 244 5.0E-93 T 26-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 117 128 - T 26-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 178 196 3.3E-9 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 74 96 3.3E-9 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 138 157 3.3E-9 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 3.3E-9 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 PANTHER PTHR11473 9 224 6.0E-96 T 26-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 PAM18_RS21285 015b627f018491587b501660e9e43440 262 SUPERFAMILY SSF56534 3 248 1.09E-100 T 26-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 PAM18_RS13450 2b56e16976fefae7f25066750935f8e2 187 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 187 1.4E-61 T 26-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 PAM18_RS13450 2b56e16976fefae7f25066750935f8e2 187 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 3 187 1.7E-50 T 26-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 PANTHER PTHR33909:SF1 2 112 2.3E-37 T 26-04-2016 PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 SMART SM01323 22 104 5.8E-42 T 26-04-2016 IPR003849 Preprotein translocase YajC PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 4.7E-12 T 26-04-2016 IPR003849 Preprotein translocase YajC PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 4.7E-12 T 26-04-2016 IPR003849 Preprotein translocase YajC PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 Pfam PF02699 Preprotein translocase subunit 28 101 1.2E-28 T 26-04-2016 IPR003849 Preprotein translocase YajC PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 104 5.7E-29 T 26-04-2016 IPR003849 Preprotein translocase YajC PAM18_RS05665 701db74427bdb380b87fade9f68c21f3 112 PANTHER PTHR33909 2 112 2.3E-37 T 26-04-2016 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 PANTHER PTHR10245:SF49 12 199 1.3E-63 T 26-04-2016 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 PANTHER PTHR10245 12 199 1.3E-63 T 26-04-2016 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 Pfam PF07883 Cupin domain 127 193 4.9E-18 T 26-04-2016 IPR013096 Cupin 2, conserved barrel PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 Pfam PF01381 Helix-turn-helix 24 78 4.3E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 Gene3D G3DSA:2.60.120.10 72 198 3.2E-25 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 SUPERFAMILY SSF51182 86 197 1.92E-27 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 SUPERFAMILY SSF47413 18 81 3.38E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 Gene3D G3DSA:1.10.260.40 15 71 4.4E-20 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS26095 1e3688731b8492805ac252a3748461e9 199 SMART SM00530 23 78 7.0E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 84 114 - T 26-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 PANTHER PTHR22946 5 244 1.8E-37 T 26-04-2016 PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 PANTHER PTHR22946:SF0 5 244 1.8E-37 T 26-04-2016 PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 Pfam PF00326 Prolyl oligopeptidase family 48 239 1.8E-11 T 26-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 Gene3D G3DSA:3.40.50.1820 4 232 5.8E-32 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14740 aedd0867b9315083987a503cdd63c064 258 SUPERFAMILY SSF53474 4 238 3.95E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 43 108 3.1E-10 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 Gene3D G3DSA:1.20.1290.10 40 177 4.5E-27 T 26-04-2016 IPR029032 AhpD-like PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 Gene3D G3DSA:1.20.5.810 9 39 8.3E-4 T 26-04-2016 PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 63 105 7.5E-9 T 26-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 PANTHER PTHR35446:SF1 1 185 2.4E-101 T 26-04-2016 PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 SUPERFAMILY SSF69118 1 183 3.93E-46 T 26-04-2016 IPR029032 AhpD-like PAM18_RS13935 a5ede520bc0181a5c98e4e648e83eba5 186 PANTHER PTHR35446 1 185 2.4E-101 T 26-04-2016 PAM18_RS05975 2a01c85ab3bbb1971361950b3c2ce317 418 PANTHER PTHR32195 1 417 3.8E-217 T 26-04-2016 PAM18_RS05975 2a01c85ab3bbb1971361950b3c2ce317 418 PIRSF PIRSF006060 10 418 3.6E-11 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS05975 2a01c85ab3bbb1971361950b3c2ce317 418 PANTHER PTHR32195:SF19 1 417 3.8E-217 T 26-04-2016 PAM18_RS05975 2a01c85ab3bbb1971361950b3c2ce317 418 Pfam PF03222 Tryptophan/tyrosine permease family 29 382 7.6E-29 T 26-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 PAM18_RS21870 c33c5df82390c046d7240637495a4ee4 427 Gene3D G3DSA:2.40.160.10 42 427 5.7E-160 T 26-04-2016 IPR023614 Porin domain PAM18_RS21870 c33c5df82390c046d7240637495a4ee4 427 PANTHER PTHR34596 8 427 2.2E-190 T 26-04-2016 PAM18_RS21870 c33c5df82390c046d7240637495a4ee4 427 Pfam PF03573 outer membrane porin, OprD family 37 425 1.6E-168 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 Pfam PF04055 Radical SAM superfamily 379 584 4.4E-22 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 Gene3D G3DSA:3.80.30.20 373 613 7.0E-50 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 Pfam PF08497 Radical SAM N-terminal 23 378 2.2E-146 T 26-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 SMART SM00729 375 628 1.4E-7 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 PANTHER PTHR32331 2 724 0.0 T 26-04-2016 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 643 4.7E-264 T 26-04-2016 IPR022946 Uncharacterised protein family UPF0313 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 694 49.733 T 26-04-2016 IPR022946 Uncharacterised protein family UPF0313 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 379 399 - T 26-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 PANTHER PTHR32331:SF3 2 724 0.0 T 26-04-2016 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 SUPERFAMILY SSF102114 469 620 4.45E-14 T 26-04-2016 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 SUPERFAMILY SSF102114 370 439 4.45E-14 T 26-04-2016 PAM18_RS25785 0dfc34b6b1e24efa2f04937116591e09 747 Pfam PF11842 Domain of unknown function (DUF3362) 593 727 3.9E-53 T 26-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 396 2.7E-119 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 Gene3D G3DSA:3.10.290.10 327 396 6.4E-16 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 SUPERFAMILY SSF52374 4 310 2.43E-99 T 26-04-2016 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 8.7E-81 T 26-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 Gene3D G3DSA:3.40.50.620 10 227 3.8E-87 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 SUPERFAMILY SSF55174 320 396 9.68E-14 T 26-04-2016 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PANTHER PTHR11766:SF1 4 397 2.3E-227 T 26-04-2016 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.2E-26 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.2E-26 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.2E-26 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.2E-26 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 396 48.178 T 26-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 Gene3D G3DSA:1.10.240.10 228 326 9.9E-35 T 26-04-2016 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 PAM18_RS03290 22f58ca828499a76494f4275cabed39a 399 PANTHER PTHR11766 4 397 2.3E-227 T 26-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 SUPERFAMILY SSF51905 194 323 4.59E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 SUPERFAMILY SSF51905 1 164 4.59E-36 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.5E-15 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.5E-15 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.5E-15 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.5E-15 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 359 374 1.5E-15 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 6.6E-22 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.6E-22 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.6E-22 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 6.6E-22 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PANTHER PTHR22912 1 376 4.2E-170 T 26-04-2016 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 Gene3D G3DSA:3.50.50.60 4 108 4.2E-18 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 281 1.5E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 Gene3D G3DSA:3.50.50.60 109 303 2.5E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27940 2d0dbe40f761b0be8ade659f303fb632 384 PANTHER PTHR22912:SF130 1 376 4.2E-170 T 26-04-2016 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.30.70.260 6 84 1.3E-7 T 26-04-2016 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 1.6E-43 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PANTHER PTHR10520 6 279 2.4E-138 T 26-04-2016 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 285 42.906 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 Pfam PF00551 Formyl transferase 91 266 6.2E-36 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.40.50.170 91 281 6.7E-54 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PANTHER PTHR10520:SF7 6 279 2.4E-138 T 26-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 SUPERFAMILY SSF53328 92 284 3.53E-59 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS28320 b89286601533ceb56e4daa65caa484ea 285 PIRSF PIRSF036480 5 285 9.6E-97 T 26-04-2016 PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 SUPERFAMILY SSF103473 18 426 3.66E-81 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 Gene3D G3DSA:1.20.1250.20 20 222 2.0E-45 T 26-04-2016 PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 PANTHER PTHR11662 16 426 6.7E-150 T 26-04-2016 PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 PANTHER PTHR11662:SF3 16 426 6.7E-150 T 26-04-2016 PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 Gene3D G3DSA:1.20.1250.20 243 425 1.6E-23 T 26-04-2016 PAM18_RS04140 6d2144599c518e13ebb70ffaa5a769e5 434 Pfam PF07690 Major Facilitator Superfamily 30 392 2.5E-49 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 386 5.2E-49 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 SMART SM00267 211 389 7.5E-57 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 PANTHER PTHR10799:SF750 194 387 8.2E-31 T 26-04-2016 PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 Gene3D G3DSA:3.30.70.270 224 388 2.0E-51 T 26-04-2016 PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 SUPERFAMILY SSF55073 227 388 2.04E-44 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 PANTHER PTHR10799 194 387 8.2E-31 T 26-04-2016 PAM18_RS08335 fd49ec2188104aa4ca03df1366e83c18 389 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 388 9.9E-49 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 31 42 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 26-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 18 149 1.6E-31 T 26-04-2016 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055 PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 Pfam PF12838 4Fe-4S dicluster domain 101 148 4.8E-9 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 Pfam PF12838 4Fe-4S dicluster domain 31 76 1.1E-6 T 26-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 PANTHER PTHR24960 31 162 1.2E-70 T 26-04-2016 PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 PANTHER PTHR24960:SF46 31 162 1.2E-70 T 26-04-2016 PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 SUPERFAMILY SSF54862 28 151 9.77E-18 T 26-04-2016 PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 Gene3D G3DSA:3.30.70.20 22 68 4.6E-10 T 26-04-2016 PAM18_RS19710 2f5255cc1913eccd64ea9eb39c2125f9 163 Gene3D G3DSA:3.30.70.20 69 156 1.3E-12 T 26-04-2016 PAM18_RS09030 dabac8a1ded9f3b106c2336baf59050b 484 PANTHER PTHR32024:SF3 3 483 0.0 T 26-04-2016 PAM18_RS09030 dabac8a1ded9f3b106c2336baf59050b 484 Pfam PF02386 Cation transport protein 41 476 3.0E-56 T 26-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 PAM18_RS09030 dabac8a1ded9f3b106c2336baf59050b 484 PANTHER PTHR32024 3 483 0.0 T 26-04-2016 PAM18_RS09030 dabac8a1ded9f3b106c2336baf59050b 484 PIRSF PIRSF006247 1 484 2.8E-168 T 26-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 PAM18_RS11895 42500bdd922b972d40696b9b59b7a585 102 Pfam PF03413 Peptidase propeptide and YPEB domain 41 98 1.5E-13 T 26-04-2016 IPR025711 PepSY domain PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.160.20 11 73 6.4E-28 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.230.10 78 160 1.6E-31 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 PANTHER PTHR13718 10 165 4.8E-72 T 26-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54768 10 77 1.05E-22 T 26-04-2016 PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 158 7.8E-31 T 26-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54211 81 160 7.33E-26 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 26-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 75 6.3E-27 T 26-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 2.6E-65 T 26-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS03510 fc08e04c3799517c32a377844260ffc9 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.768 T 26-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 Gene3D G3DSA:1.10.10.10 24 90 4.7E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 6.1E-15 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 PANTHER PTHR11751 85 448 3.3E-260 T 26-04-2016 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 SUPERFAMILY SSF46785 24 95 6.12E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 Pfam PF00155 Aminotransferase class I and II 141 444 1.9E-24 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 SUPERFAMILY SSF53383 138 465 2.55E-67 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 SMART SM00345 28 87 5.4E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 Gene3D G3DSA:3.40.640.10 142 359 6.4E-56 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS15100 e3f438430c4111af552a83e2e95a618f 477 PANTHER PTHR11751:SF413 85 448 3.3E-260 T 26-04-2016 PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 Gene3D G3DSA:3.30.300.20 2 127 1.4E-29 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 26-04-2016 IPR019938 YcaO domain protein PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 3.6E-95 T 26-04-2016 IPR003776 YcaO-like domain PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 PANTHER PTHR39624 11 142 2.2E-17 T 26-04-2016 PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 SUPERFAMILY SSF82784 2 127 2.09E-20 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 Pfam PF02566 OsmC-like protein 32 126 5.9E-10 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS15960 358a33f77d6b1928f4dc6f95bec4fc8d 756 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 2.1E-70 T 26-04-2016 IPR003776 YcaO-like domain PAM18_RS10010 7b6112f255c26938c83cf929d79a72f0 87 Gene3D G3DSA:2.30.30.320 3 71 4.4E-32 T 26-04-2016 IPR023387 DUF1653-like domain PAM18_RS10010 7b6112f255c26938c83cf929d79a72f0 87 Pfam PF07866 Protein of unknown function (DUF1653) 7 66 1.4E-30 T 26-04-2016 IPR023387 DUF1653-like domain PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 Pfam PF00263 Bacterial type II and III secretion system protein 566 732 4.9E-49 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 Pfam PF03958 Bacterial type II/III secretion system short domain 263 331 3.9E-12 T 26-04-2016 IPR005644 NolW-like PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 Pfam PF03958 Bacterial type II/III secretion system short domain 199 259 2.1E-10 T 26-04-2016 IPR005644 NolW-like PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 Pfam PF03958 Bacterial type II/III secretion system short domain 339 482 7.5E-11 T 26-04-2016 IPR005644 NolW-like PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PANTHER PTHR30332:SF8 1 802 0.0 T 26-04-2016 PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 104 741 7.5E-199 T 26-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PANTHER PTHR30332 1 802 0.0 T 26-04-2016 PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 586 1.2E-26 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 1.2E-26 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 696 714 1.2E-26 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 607 1.2E-26 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS22230 434f27ba5a4bc8fc1934e47381c97d8c 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 719 733 1.2E-26 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS09070 299cb11e9fbae1bb6567a876267edb2a 99 Pfam PF03795 YCII-related domain 1 95 5.2E-30 T 26-04-2016 IPR005545 YCII-related PAM18_RS09070 299cb11e9fbae1bb6567a876267edb2a 99 Gene3D G3DSA:3.30.70.1060 1 98 8.3E-35 T 26-04-2016 PAM18_RS09070 299cb11e9fbae1bb6567a876267edb2a 99 SUPERFAMILY SSF54909 1 97 2.15E-30 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS09070 299cb11e9fbae1bb6567a876267edb2a 99 PANTHER PTHR33606 1 98 1.2E-31 T 26-04-2016 PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 SMART SM00382 55 257 3.8E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 Gene3D G3DSA:3.40.50.300 31 271 9.9E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 PANTHER PTHR24220 32 276 1.1E-139 T 26-04-2016 PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 PANTHER PTHR24220:SF585 32 276 1.1E-139 T 26-04-2016 PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 SUPERFAMILY SSF52540 28 264 8.28E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 32 277 2.3E-125 T 26-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS28025 5305c3e21a4455b45a70215bb3160137 277 Pfam PF00005 ABC transporter 48 201 6.6E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 Gene3D G3DSA:3.40.50.1820 100 219 7.4E-12 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 Gene3D G3DSA:3.40.50.1820 371 432 7.4E-12 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 Gene3D G3DSA:3.40.50.1820 318 319 7.4E-12 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 PANTHER PTHR30035 2 437 3.4E-285 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 SUPERFAMILY SSF53474 88 236 8.83E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 SUPERFAMILY SSF53474 264 419 8.83E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS08890 e1f07724adc0828217036b8092bacf27 453 PANTHER PTHR30035:SF1 2 437 3.4E-285 T 26-04-2016 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 44 108 9.1E-21 T 26-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 Gene3D G3DSA:1.10.150.280 36 109 1.0E-16 T 26-04-2016 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 SUPERFAMILY SSF47781 34 107 4.78E-24 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 PANTHER PTHR21180 6 108 3.8E-26 T 26-04-2016 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 SMART SM00278 56 75 2.7 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 SMART SM00278 86 105 20.0 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS09340 1cdffd18896386f2a053f0e8ac19fe33 109 Pfam PF12836 Helix-hairpin-helix motif 44 106 5.3E-20 T 26-04-2016 PAM18_RS05640 ce7a5bfddc7e34b6ee03be71fdd18df4 165 Pfam PF06271 RDD family 14 151 1.9E-28 T 26-04-2016 IPR010432 RDD PAM18_RS05640 ce7a5bfddc7e34b6ee03be71fdd18df4 165 PANTHER PTHR36115:SF2 5 165 5.7E-81 T 26-04-2016 PAM18_RS05640 ce7a5bfddc7e34b6ee03be71fdd18df4 165 PANTHER PTHR36115 5 165 5.7E-81 T 26-04-2016 PAM18_RS09635 5598f39559c73bab95ed74eeb5f3f646 321 Pfam PF08907 Domain of unknown function (DUF1853) 17 300 1.4E-94 T 26-04-2016 IPR015003 Protein of unknown function DUF1853 PAM18_RS17105 d8c990a47abf17ccc85615887163d034 145 Gene3D G3DSA:3.30.1460.10 7 127 7.1E-10 T 26-04-2016 PAM18_RS17105 d8c990a47abf17ccc85615887163d034 145 SUPERFAMILY SSF69635 4 129 5.23E-28 T 26-04-2016 PAM18_RS17105 d8c990a47abf17ccc85615887163d034 145 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 6.7E-24 T 26-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.192.10 1 145 2.3E-57 T 26-04-2016 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.50.720 146 329 8.1E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 SMART SM00839 138 339 1.9E-66 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF53223 2 134 7.68E-41 T 26-04-2016 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PIRSF PIRSF000188 1 341 2.0E-141 T 26-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF51735 138 335 4.33E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 129 7.1E-22 T 26-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 280 291 2.0E-11 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 2.0E-11 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 170 190 2.0E-11 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PANTHER PTHR11606:SF3 1 336 3.2E-117 T 26-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 PANTHER PTHR11606 1 336 3.2E-117 T 26-04-2016 PAM18_RS07950 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 290 9.1E-9 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 2.7E-73 T 26-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 Gene3D G3DSA:3.40.50.720 420 550 2.1E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 Pfam PF00999 Sodium/hydrogen exchanger family 12 384 4.1E-76 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 PANTHER PTHR16254:SF17 1 550 0.0 T 26-04-2016 PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 PANTHER PTHR16254 1 550 0.0 T 26-04-2016 PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 SUPERFAMILY SSF51735 422 549 1.79E-26 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS28825 c5fac12d4dc41be5ddbcf9658690cff0 567 Pfam PF02254 TrkA-N domain 424 537 4.4E-23 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PAM18_RS00165 cdb24be0b673d70d9f2777e63ba15443 125 SUPERFAMILY SSF143410 2 113 3.01E-45 T 26-04-2016 IPR023389 DOPA-like domain PAM18_RS00165 cdb24be0b673d70d9f2777e63ba15443 125 Pfam PF08883 Dopa 4,5-dioxygenase family 12 111 4.7E-34 T 26-04-2016 IPR014980 Dopa 4,5-dioxygenase PAM18_RS00165 cdb24be0b673d70d9f2777e63ba15443 125 PANTHER PTHR36423 1 125 9.5E-19 T 26-04-2016 PAM18_RS00165 cdb24be0b673d70d9f2777e63ba15443 125 PIRSF PIRSF028139 2 115 2.4E-47 T 26-04-2016 IPR014980 Dopa 4,5-dioxygenase PAM18_RS00165 cdb24be0b673d70d9f2777e63ba15443 125 Gene3D G3DSA:3.30.70.1240 3 113 2.9E-43 T 26-04-2016 IPR023389 DOPA-like domain PAM18_RS23285 ae2246a03e588b4c6941ed6f892dccd3 300 Pfam PF02535 ZIP Zinc transporter 155 295 1.2E-15 T 26-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PAM18_RS23285 ae2246a03e588b4c6941ed6f892dccd3 300 PANTHER PTHR11040:SF33 14 21 3.4E-72 T 26-04-2016 PAM18_RS23285 ae2246a03e588b4c6941ed6f892dccd3 300 PANTHER PTHR11040:SF33 41 300 3.4E-72 T 26-04-2016 PAM18_RS23285 ae2246a03e588b4c6941ed6f892dccd3 300 PANTHER PTHR11040 14 21 3.4E-72 T 26-04-2016 PAM18_RS23285 ae2246a03e588b4c6941ed6f892dccd3 300 PANTHER PTHR11040 41 300 3.4E-72 T 26-04-2016 PAM18_RS07985 938203e31e7f5c34d86c680a7c502c90 89 Pfam PF10976 Protein of unknown function (DUF2790) 10 87 1.3E-25 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 3 408 54.193 T 26-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.30.9.10 139 186 3.6E-8 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.30.9.10 268 356 3.6E-8 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Pfam PF01266 FAD dependent oxidoreductase 4 394 1.3E-61 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 SUPERFAMILY SSF54373 267 357 1.31E-13 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.50.50.60 187 267 3.3E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.50.50.60 110 124 3.3E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.50.50.60 3 57 3.3E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 Gene3D G3DSA:3.50.50.60 357 410 3.3E-40 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 PANTHER PTHR13847 109 411 6.1E-97 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 PANTHER PTHR13847 4 65 6.1E-97 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 SUPERFAMILY SSF51905 112 269 3.24E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 SUPERFAMILY SSF51905 4 56 3.24E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 SUPERFAMILY SSF51905 357 406 3.24E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 PANTHER PTHR13847:SF206 109 411 6.1E-97 T 26-04-2016 PAM18_RS26585 e80488aa710119ba19d7abf89e96f11a 416 PANTHER PTHR13847:SF206 4 65 6.1E-97 T 26-04-2016 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 Gene3D G3DSA:3.20.20.70 4 205 1.7E-68 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 SUPERFAMILY SSF51366 5 205 1.4E-61 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 PANTHER PTHR22854 4 207 5.3E-70 T 26-04-2016 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 201 7.1E-45 T 26-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 PANTHER PTHR22854:SF6 4 207 5.3E-70 T 26-04-2016 PAM18_RS09500 2a926be7670c9f86eb17f8b3383a68be 211 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 41.722 T 26-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 Pfam PF13452 N-terminal half of MaoC dehydratase 19 133 1.6E-8 T 26-04-2016 PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 PANTHER PTHR28152:SF1 12 275 7.2E-75 T 26-04-2016 PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 PANTHER PTHR28152 12 275 7.2E-75 T 26-04-2016 PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 SUPERFAMILY SSF54637 168 260 1.66E-13 T 26-04-2016 IPR029069 HotDog domain PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 SUPERFAMILY SSF54637 58 147 3.27E-8 T 26-04-2016 IPR029069 HotDog domain PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 Gene3D G3DSA:3.10.129.10 87 144 2.7E-4 T 26-04-2016 IPR029069 HotDog domain PAM18_RS21255 bedc60be03908a57b62fa42ba0fb3415 275 Gene3D G3DSA:3.10.129.10 170 250 5.6E-6 T 26-04-2016 IPR029069 HotDog domain PAM18_RS15290 ab45e3cc43e23eab638abec453ec6b95 407 SUPERFAMILY SSF53474 14 139 7.3E-8 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS15290 ab45e3cc43e23eab638abec453ec6b95 407 PANTHER PTHR33840:SF4 1 406 9.8E-162 T 26-04-2016 PAM18_RS15290 ab45e3cc43e23eab638abec453ec6b95 407 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 23 286 2.1E-75 T 26-04-2016 IPR018712 Domain of unknown function DUF2235 PAM18_RS15290 ab45e3cc43e23eab638abec453ec6b95 407 PANTHER PTHR33840 1 406 9.8E-162 T 26-04-2016 PAM18_RS15290 ab45e3cc43e23eab638abec453ec6b95 407 Gene3D G3DSA:3.40.50.1820 22 139 1.2E-5 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS05870 a70cc30f337e22d86e02d479497b0163 253 Pfam PF01427 D-ala-D-ala dipeptidase 72 223 4.2E-21 T 26-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PAM18_RS05870 a70cc30f337e22d86e02d479497b0163 253 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 23 227 24.575 T 26-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 PAM18_RS05870 a70cc30f337e22d86e02d479497b0163 253 Gene3D G3DSA:3.30.1380.10 51 228 2.5E-51 T 26-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PAM18_RS05870 a70cc30f337e22d86e02d479497b0163 253 SUPERFAMILY SSF55166 23 227 6.28E-52 T 26-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 Gene3D G3DSA:2.160.10.10 59 214 5.0E-39 T 26-04-2016 PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 1.7E-80 T 26-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 PANTHER PTHR23416:SF55 1 216 2.2E-108 T 26-04-2016 PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 152 1.3E-7 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 0.002 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 Gene3D G3DSA:1.10.3130.10 1 58 7.0E-28 T 26-04-2016 PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 PANTHER PTHR23416 1 216 2.2E-108 T 26-04-2016 PAM18_RS05695 c0f498edcf68c3b26929d133476da85c 258 SUPERFAMILY SSF51161 2 172 5.27E-58 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS19575 bb50db280a518f8a868ae1ddccfb1978 135 Pfam PF02566 OsmC-like protein 36 130 3.9E-20 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS19575 bb50db280a518f8a868ae1ddccfb1978 135 PANTHER PTHR39624 1 135 4.1E-65 T 26-04-2016 PAM18_RS19575 bb50db280a518f8a868ae1ddccfb1978 135 PANTHER PTHR39624:SF2 1 135 4.1E-65 T 26-04-2016 PAM18_RS19575 bb50db280a518f8a868ae1ddccfb1978 135 Gene3D G3DSA:3.30.300.20 4 133 7.1E-42 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS19575 bb50db280a518f8a868ae1ddccfb1978 135 SUPERFAMILY SSF82784 10 133 1.07E-35 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 PANTHER PTHR38101 1 174 3.7E-84 T 26-04-2016 PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 Pfam PF04751 Protein of unknown function (DUF615) 13 164 4.7E-55 T 26-04-2016 IPR006839 Ribosome-associated, YjgA PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 168 21.511 T 26-04-2016 IPR006839 Ribosome-associated, YjgA PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 SUPERFAMILY SSF158710 24 166 3.27E-51 T 26-04-2016 PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 PANTHER PTHR38101:SF1 1 174 3.7E-84 T 26-04-2016 PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 Gene3D G3DSA:1.10.60.30 100 170 6.2E-29 T 26-04-2016 IPR023153 PSPTO4464-like domain PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 PIRSF PIRSF016183 1 172 1.4E-67 T 26-04-2016 IPR006839 Ribosome-associated, YjgA PAM18_RS23315 f17f36632cc67bee52ecc6915dbfccf4 174 Gene3D G3DSA:1.10.60.30 24 98 5.7E-28 T 26-04-2016 IPR023153 PSPTO4464-like domain PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 PANTHER PTHR24220:SF368 10 266 6.4E-180 T 26-04-2016 PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 SMART SM00382 33 222 2.1E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 Gene3D G3DSA:3.40.50.300 4 241 6.8E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 Pfam PF00005 ABC transporter 25 172 1.2E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 SUPERFAMILY SSF52540 8 234 1.74E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23230 d3532d0b384f66ccea2e6536da21d9bb 269 PANTHER PTHR24220 10 266 6.4E-180 T 26-04-2016 PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 PANTHER PTHR30121:SF3 2 445 2.3E-170 T 26-04-2016 PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 PANTHER PTHR30121 2 445 2.3E-170 T 26-04-2016 PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 Gene3D G3DSA:3.40.50.300 9 111 3.0E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 Gene3D G3DSA:3.40.50.300 207 383 3.0E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 SUPERFAMILY SSF52540 7 386 1.71E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 9 495 1.2E-227 T 26-04-2016 IPR033186 Helicase HerA-like C-terminal PAM18_RS22475 3bbf8e8b31998359e2e6f19cdc3ed696 496 SMART SM00382 25 331 5.9E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 PIRSF PIRSF029342 1 339 2.1E-135 T 26-04-2016 IPR016915 Uncharacterised conserved protein UCP029342 PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 Pfam PF03734 L,D-transpeptidase catalytic domain 59 167 2.0E-18 T 26-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 SUPERFAMILY SSF141523 55 166 1.44E-28 T 26-04-2016 PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 PANTHER PTHR30582:SF2 36 249 6.1E-65 T 26-04-2016 PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 Gene3D G3DSA:2.40.440.10 54 167 1.8E-18 T 26-04-2016 PAM18_RS21995 98a9768f8b947c4fd21ce0471b9ca6b2 347 PANTHER PTHR30582 36 249 6.1E-65 T 26-04-2016 PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 Gene3D G3DSA:3.40.50.2000 174 352 8.7E-25 T 26-04-2016 PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 Pfam PF13439 Glycosyltransferase Family 4 16 171 2.5E-8 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 PANTHER PTHR12526 1 374 5.3E-53 T 26-04-2016 PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 PANTHER PTHR12526:SF399 1 374 5.3E-53 T 26-04-2016 PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 SUPERFAMILY SSF53756 11 373 7.18E-66 T 26-04-2016 PAM18_RS28470 df55b0076d30c51e364b3f078223ceb4 375 Pfam PF00534 Glycosyl transferases group 1 198 335 5.2E-26 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 PANTHER PTHR34595 3 470 0.0 T 26-04-2016 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 446 2.6E-165 T 26-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 PANTHER PTHR34595:SF3 3 470 0.0 T 26-04-2016 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 PIRSF PIRSF005522 1 470 2.6E-231 T 26-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 SUPERFAMILY SSF56059 15 210 1.94E-63 T 26-04-2016 PAM18_RS17005 fe12709c82cf7e05351be7dc48a4b062 470 SUPERFAMILY SSF56059 315 461 1.94E-63 T 26-04-2016 PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 Gene3D G3DSA:3.40.50.1820 22 320 5.0E-76 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 SUPERFAMILY SSF53474 249 320 1.28E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 SUPERFAMILY SSF53474 4 163 1.28E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 SUPERFAMILY SSF53474 208 219 1.28E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 PANTHER PTHR17630 23 320 1.9E-103 T 26-04-2016 PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 31 171 1.5E-9 T 26-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 PAM18_RS14470 3190aa00260a593b2b608377f1fd42cc 320 PANTHER PTHR17630:SF49 23 320 1.9E-103 T 26-04-2016 PAM18_RS01005 c0e361636bba751e46ca79bb2088e2a7 239 PANTHER PTHR30625:SF3 15 234 3.1E-67 T 26-04-2016 PAM18_RS01005 c0e361636bba751e46ca79bb2088e2a7 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 199 1.5E-37 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS01005 c0e361636bba751e46ca79bb2088e2a7 239 PANTHER PTHR30625 15 234 3.1E-67 T 26-04-2016 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 PIRSF PIRSF036630 3 580 6.4E-294 T 26-04-2016 IPR012047 Uncharacterised conserved protein UCP036630 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 PANTHER PTHR36577 7 576 0.0 T 26-04-2016 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 Gene3D G3DSA:3.30.499.10 439 519 1.3E-6 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 SUPERFAMILY SSF53732 439 535 3.4E-6 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 Gene3D G3DSA:3.50.30.10 9 136 1.5E-41 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 SUPERFAMILY SSF52016 7 114 8.63E-34 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 PANTHER PTHR36577:SF1 7 576 0.0 T 26-04-2016 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 Pfam PF04412 Protein of unknown function (DUF521) 161 561 3.1E-147 T 26-04-2016 IPR007506 Domain of unknown function DUF521 PAM18_RS19290 2df5fdb0ee9151508519c48765790646 580 Pfam PF01989 Protein of unknown function DUF126 28 103 1.3E-29 T 26-04-2016 IPR002840 Domain of unknown function DUF126 PAM18_RS28265 2a577bf664dd05112da2d24677c2040a 186 PANTHER PTHR34989 4 186 8.5E-41 T 26-04-2016 PAM18_RS28265 2a577bf664dd05112da2d24677c2040a 186 Pfam PF03729 Short repeat of unknown function (DUF308) 135 181 6.4E-6 T 26-04-2016 IPR005325 Protein of unknown function DUF308, membrane PAM18_RS28265 2a577bf664dd05112da2d24677c2040a 186 Pfam PF03729 Short repeat of unknown function (DUF308) 76 146 9.2E-15 T 26-04-2016 IPR005325 Protein of unknown function DUF308, membrane PAM18_RS28265 2a577bf664dd05112da2d24677c2040a 186 Pfam PF03729 Short repeat of unknown function (DUF308) 19 90 2.2E-12 T 26-04-2016 IPR005325 Protein of unknown function DUF308, membrane PAM18_RS28265 2a577bf664dd05112da2d24677c2040a 186 PANTHER PTHR34989:SF1 4 186 8.5E-41 T 26-04-2016 PAM18_RS14315 be1d42e36d86292c605932df09bcb39a 328 PANTHER PTHR37285:SF2 2 328 1.5E-134 T 26-04-2016 PAM18_RS14315 be1d42e36d86292c605932df09bcb39a 328 PIRSF PIRSF037196 2 325 1.4E-167 T 26-04-2016 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA PAM18_RS14315 be1d42e36d86292c605932df09bcb39a 328 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 48 301 1.1E-78 T 26-04-2016 IPR007817 Pyoverdine biosynthesis PAM18_RS14315 be1d42e36d86292c605932df09bcb39a 328 PANTHER PTHR37285 2 328 1.5E-134 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 112 211 8.2E-5 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 3.8E-18 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 PANTHER PTHR38834:SF1 1 249 5.7E-130 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 PANTHER PTHR38834 1 249 5.7E-130 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 32 111 1.3E-10 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 212 250 1.3E-10 T 26-04-2016 PAM18_RS26855 9c8b9575cbb7925b7c3f906d50873e52 250 SUPERFAMILY SSF53850 30 250 7.29E-35 T 26-04-2016 PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.217 T 26-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 Gene3D G3DSA:3.30.230.10 5 130 6.3E-52 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 SUPERFAMILY SSF54211 6 130 1.93E-48 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 26-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 PANTHER PTHR21569 1 130 8.9E-72 T 26-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PAM18_RS23110 52e8b4b61635dfaa9791524f7549dd69 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.8E-48 T 26-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PANTHER PTHR26402 27 156 1.6E-42 T 26-04-2016 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PANTHER PTHR26402 173 261 1.6E-42 T 26-04-2016 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 SMART SM00421 199 256 3.0E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 4.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 4.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 4.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 252 8.4E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 SUPERFAMILY SSF46894 196 258 3.03E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PANTHER PTHR26402:SF572 27 156 1.6E-42 T 26-04-2016 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 PANTHER PTHR26402:SF572 173 261 1.6E-42 T 26-04-2016 PAM18_RS07135 9bead9e098513b6e5b17bdac584d6f6f 261 Gene3D G3DSA:1.10.10.10 201 259 9.5E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.8E-94 T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 Pfam PF00557 Metallopeptidase family M24 10 239 3.4E-51 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.5E-20 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.5E-20 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.5E-20 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.5E-20 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 38.935 T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 SUPERFAMILY SSF55920 1 252 1.1E-87 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PANTHER PTHR10804:SF75 1 252 2.4E-125 T 26-04-2016 PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 PANTHER PTHR10804 1 252 2.4E-125 T 26-04-2016 PAM18_RS11430 cbbfd5a66ad333ec9f5c46aadc341a4a 260 Gene3D G3DSA:3.90.230.10 1 253 1.8E-93 T 26-04-2016 IPR000994 Peptidase M24, structural domain PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 PANTHER PTHR23523 23 424 2.4E-191 T 26-04-2016 PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 PANTHER PTHR23523:SF2 23 424 2.4E-191 T 26-04-2016 PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 SUPERFAMILY SSF103473 19 412 2.75E-48 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 Pfam PF07690 Major Facilitator Superfamily 58 373 4.7E-20 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 Gene3D G3DSA:1.20.1250.20 232 409 5.2E-15 T 26-04-2016 PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 Gene3D G3DSA:1.20.1250.20 37 220 2.7E-15 T 26-04-2016 PAM18_RS17535 2c53d1e3602d98d00e2d722a5bb803e9 424 TIGRFAM TIGR00896 CynX: cyanate transporter 42 391 2.8E-135 T 26-04-2016 IPR004747 Cyanate transport system protein GO:0016021 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 Pfam PF00266 Aminotransferase class-V 5 368 4.7E-84 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 PIRSF PIRSF005572 2 384 6.6E-131 T 26-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 PANTHER PTHR11601 4 404 1.6E-235 T 26-04-2016 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.90.1150.10 255 375 4.5E-50 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 PANTHER PTHR11601:SF45 4 404 1.6E-235 T 26-04-2016 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.6E-234 T 26-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.40.640.10 17 254 1.5E-94 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.608 T 26-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 PAM18_RS05705 59782e5ebe6157e88a79deff7ede8e8a 404 SUPERFAMILY SSF53383 5 391 6.12E-111 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS11770 84f7d41e6f5c5a83daf4f10c707d6fb9 320 PANTHER PTHR10314:SF124 1 318 2.2E-198 T 26-04-2016 PAM18_RS11770 84f7d41e6f5c5a83daf4f10c707d6fb9 320 PANTHER PTHR10314 1 318 2.2E-198 T 26-04-2016 PAM18_RS11770 84f7d41e6f5c5a83daf4f10c707d6fb9 320 SUPERFAMILY SSF53686 6 313 1.06E-97 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS11770 84f7d41e6f5c5a83daf4f10c707d6fb9 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 306 2.7E-81 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS11770 84f7d41e6f5c5a83daf4f10c707d6fb9 320 Gene3D G3DSA:3.40.50.1100 73 314 4.8E-72 T 26-04-2016 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 PANTHER PTHR10909:SF229 1 381 8.4E-183 T 26-04-2016 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 PANTHER PTHR10909 1 381 8.4E-183 T 26-04-2016 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 SUPERFAMILY SSF56645 9 239 4.71E-68 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 377 1.7E-16 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Gene3D G3DSA:1.10.540.10 6 119 2.7E-23 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Gene3D G3DSA:2.40.110.10 121 216 4.0E-34 T 26-04-2016 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Gene3D G3DSA:1.20.140.10 217 381 9.2E-28 T 26-04-2016 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 118 1.3E-19 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.5E-22 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS20540 621ee84e38d395472ada55173a3fcf5e 381 SUPERFAMILY SSF47203 228 379 1.01E-18 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS17565 49a241df9bed5d1be3672d16c14479dc 213 PIRSF PIRSF006324 1 208 6.7E-45 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS17565 49a241df9bed5d1be3672d16c14479dc 213 Pfam PF01810 LysE type translocator 16 205 2.1E-35 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS17565 49a241df9bed5d1be3672d16c14479dc 213 PANTHER PTHR30086:SF13 2 213 6.9E-110 T 26-04-2016 PAM18_RS17565 49a241df9bed5d1be3672d16c14479dc 213 PANTHER PTHR30086 2 213 6.9E-110 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 PANTHER PTHR21000:SF11 1 369 0.0 T 26-04-2016 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 PANTHER PTHR21000:SF11 404 612 0.0 T 26-04-2016 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 SUPERFAMILY SSF52016 419 606 1.33E-59 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 SUPERFAMILY SSF143975 3 418 2.09E-137 T 26-04-2016 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 Pfam PF00920 Dehydratase family 34 603 1.4E-218 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 PANTHER PTHR21000 1 369 0.0 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 PANTHER PTHR21000 404 612 0.0 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 5.1E-252 T 26-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS01780 b70f037dec889bdcc19626e0ec15b83d 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 45.008 T 26-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS00130 d4041de21b3caa53617fc516e60f867b 328 SUPERFAMILY SSF48537 133 320 7.06E-34 T 26-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 PAM18_RS00130 d4041de21b3caa53617fc516e60f867b 328 Gene3D G3DSA:1.10.575.10 19 324 8.5E-64 T 26-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 PAM18_RS20865 36ae13252a37c70c66fc5e54487903d2 411 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 267 2.6E-74 T 26-04-2016 IPR017039 Virulence factor BrkB PAM18_RS20865 36ae13252a37c70c66fc5e54487903d2 411 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 9 292 23.632 T 26-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial PAM18_RS20865 36ae13252a37c70c66fc5e54487903d2 411 PANTHER PTHR30213:SF0 9 399 1.0E-164 T 26-04-2016 PAM18_RS20865 36ae13252a37c70c66fc5e54487903d2 411 PANTHER PTHR30213 9 399 1.0E-164 T 26-04-2016 PAM18_RS20865 36ae13252a37c70c66fc5e54487903d2 411 Pfam PF03631 Virulence factor BrkB 22 266 1.0E-58 T 26-04-2016 IPR017039 Virulence factor BrkB PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.0E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 Gene3D G3DSA:3.40.50.720 5 265 2.3E-87 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 203 4.2E-6 T 26-04-2016 PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 Pfam PF00106 short chain dehydrogenase 15 201 1.3E-61 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.0E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.0E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.0E-14 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PANTHER PTHR24322 162 193 1.0E-60 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 PANTHER PTHR24322 18 146 1.0E-60 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS04030 41f48458d233868c6f02b6477098ab8c 266 SUPERFAMILY SSF51735 9 265 9.08E-81 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09205 f809fe96997cf57ed44b2d71313ce08b 404 PANTHER PTHR36178:SF1 1 403 2.1E-198 T 26-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PAM18_RS09205 f809fe96997cf57ed44b2d71313ce08b 404 PANTHER PTHR36178 1 403 2.1E-198 T 26-04-2016 PAM18_RS09205 f809fe96997cf57ed44b2d71313ce08b 404 Pfam PF03616 Sodium/glutamate symporter 4 370 1.2E-148 T 26-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PAM18_RS09205 f809fe96997cf57ed44b2d71313ce08b 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 400 1.4E-100 T 26-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 PANTHER PTHR30055 2 183 2.0E-37 T 26-04-2016 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.5E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.5E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 PANTHER PTHR30055:SF66 2 183 2.0E-37 T 26-04-2016 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 93 171 1.2E-8 T 26-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 Gene3D G3DSA:1.10.357.10 2 192 7.2E-32 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 SUPERFAMILY SSF46689 3 70 1.1E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 SUPERFAMILY SSF48498 82 198 5.48E-12 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS15505 cf90b2172f069e44a976a861b0e85099 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 8.0E-14 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 Gene3D G3DSA:1.20.1250.20 228 399 3.0E-18 T 26-04-2016 PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 Gene3D G3DSA:1.20.1250.20 23 202 4.0E-16 T 26-04-2016 PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 PANTHER PTHR23517 1 401 3.5E-186 T 26-04-2016 PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 SUPERFAMILY SSF103473 22 400 1.31E-44 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 Hamap MF_01118 UPF0226 membrane protein . 7 398 30.918 T 26-04-2016 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 Pfam PF07690 Major Facilitator Superfamily 230 399 1.1E-10 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS15645 58250b860feca414c5d197fd8258ad14 402 PANTHER PTHR23517:SF4 1 401 3.5E-186 T 26-04-2016 PAM18_RS27340 7ab4c2f399ce417a01f55705b2501bf0 374 PANTHER PTHR30294 1 373 5.3E-265 T 26-04-2016 PAM18_RS27340 7ab4c2f399ce417a01f55705b2501bf0 374 PANTHER PTHR30294:SF22 1 373 5.3E-265 T 26-04-2016 PAM18_RS27340 7ab4c2f399ce417a01f55705b2501bf0 374 Pfam PF12698 ABC-2 family transporter protein 28 362 1.1E-29 T 26-04-2016 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 8.9E-99 T 26-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 PANTHER PTHR21499:SF23 1 244 5.2E-115 T 26-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 PIRSF PIRSF005650 7 245 6.0E-89 T 26-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 PANTHER PTHR21499 1 244 5.2E-115 T 26-04-2016 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 Gene3D G3DSA:3.40.1160.10 6 243 7.7E-85 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 SUPERFAMILY SSF53633 10 242 7.99E-73 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 44.024 T 26-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 PAM18_RS06540 cbfb8b68f9452577f28cbbc4968e9e3f 245 Pfam PF00696 Amino acid kinase family 13 222 1.0E-26 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 PAM18_RS00280 6eb4a63b6d6c88a8465ded4dff1084f0 182 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 8 172 4.5E-36 T 26-04-2016 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 PAM18_RS00280 6eb4a63b6d6c88a8465ded4dff1084f0 182 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 5 179 34.852 T 26-04-2016 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 PAM18_RS00280 6eb4a63b6d6c88a8465ded4dff1084f0 182 SUPERFAMILY SSF56399 9 179 1.35E-55 T 26-04-2016 PAM18_RS00280 6eb4a63b6d6c88a8465ded4dff1084f0 182 PANTHER PTHR12684:SF2 1 182 2.2E-62 T 26-04-2016 PAM18_RS00280 6eb4a63b6d6c88a8465ded4dff1084f0 182 PANTHER PTHR12684 1 182 2.2E-62 T 26-04-2016 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 Pfam PF00263 Bacterial type II and III secretion system protein 345 505 1.1E-40 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 Pfam PF03958 Bacterial type II/III secretion system short domain 178 272 6.2E-15 T 26-04-2016 IPR005644 NolW-like PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 30 505 9.8E-162 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PANTHER PTHR30332 1 574 0.0 T 26-04-2016 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PANTHER PTHR30332:SF5 1 574 0.0 T 26-04-2016 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 358 377 7.7E-36 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 190 207 7.7E-36 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 392 407 7.7E-36 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 275 295 7.7E-36 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 483 502 7.7E-36 T 26-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 PAM18_RS17075 07480c372b17869474ea34f1291e2e72 600 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 450 483 - T 26-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PAM18_RS25855 1ca00adc3993c2108b5bf3b8493e84af 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 4.7E-21 T 26-04-2016 IPR019201 Protein of unknown function DUF2065 PAM18_RS25855 1ca00adc3993c2108b5bf3b8493e84af 61 PANTHER PTHR38602:SF1 1 61 1.7E-21 T 26-04-2016 PAM18_RS25855 1ca00adc3993c2108b5bf3b8493e84af 61 PANTHER PTHR38602 1 61 1.7E-21 T 26-04-2016 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:2.40.33.10 75 169 1.7E-28 T 26-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF52935 327 479 5.36E-36 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 26-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PANTHER PTHR11817 1 483 4.9E-300 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Pfam PF00224 Pyruvate kinase, barrel domain 4 342 1.6E-122 T 26-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.40.1380.20 330 478 2.0E-36 T 26-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.20.20.60 4 74 1.2E-93 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.20.20.60 170 329 1.2E-93 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PANTHER PTHR11817:SF17 1 483 4.9E-300 T 26-04-2016 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 478 3.6E-159 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 298 316 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 61 77 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 221 247 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 273 297 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 248 272 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 317 333 2.9E-49 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF50800 72 165 4.36E-25 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 1.7E-26 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF51621 169 343 6.63E-92 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS22585 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF51621 2 77 6.63E-92 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS18555 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 SUPERFAMILY SSF52788 1 107 2.49E-19 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS18555 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 PIRSF PIRSF029416 1 109 1.4E-51 T 26-04-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 PAM18_RS18555 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 Gene3D G3DSA:3.40.50.270 1 39 1.8E-7 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303 292 525 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303 593 802 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303 131 266 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SUPERFAMILY SSF50998 574 801 5.89E-150 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SUPERFAMILY SSF50998 164 539 5.89E-150 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303:SF4 292 525 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303:SF4 593 802 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 PANTHER PTHR32303:SF4 131 266 0.0 T 26-04-2016 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 Gene3D G3DSA:2.140.10.10 161 551 5.9E-159 T 26-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 Gene3D G3DSA:2.140.10.10 585 802 5.9E-159 T 26-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 801 0.0 T 26-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 Pfam PF01011 PQQ enzyme repeat 732 766 8.5E-6 T 26-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 Pfam PF13360 PQQ-like domain 236 477 2.7E-9 T 26-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SMART SM00564 357 398 9.4 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SMART SM00564 426 476 89.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SMART SM00564 222 253 2.3E-5 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SMART SM00564 300 332 120.0 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS14135 24c8b5653771f21889b4dba79a480eab 803 SMART SM00564 723 756 0.0045 T 26-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAM18_RS02385 04f6a2e400180abff12e15445b94bba4 323 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 2.1E-14 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS02385 04f6a2e400180abff12e15445b94bba4 323 PIRSF PIRSF018266 5 323 3.6E-85 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS02385 04f6a2e400180abff12e15445b94bba4 323 Pfam PF04773 FecR protein 122 209 1.9E-17 T 26-04-2016 IPR006860 FecR protein PAM18_RS02385 04f6a2e400180abff12e15445b94bba4 323 PANTHER PTHR30273 8 323 8.3E-146 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS02385 04f6a2e400180abff12e15445b94bba4 323 PANTHER PTHR30273:SF3 8 323 8.3E-146 T 26-04-2016 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 Pfam PF01252 Signal peptidase (SPase) II 16 158 4.4E-38 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 PANTHER PTHR33695 1 163 2.3E-64 T 26-04-2016 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 PANTHER PTHR33695:SF1 1 163 2.3E-64 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 5.1E-19 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 5.1E-19 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 5.1E-19 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 164 17.696 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS23775 9799460a65c88dd8c95400bca2cc7cc2 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 1.7E-41 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PANTHER PTHR24322:SF554 163 194 2.0E-81 T 26-04-2016 PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PANTHER PTHR24322:SF554 10 145 2.0E-81 T 26-04-2016 PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.8E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.8E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.8E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.8E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 SUPERFAMILY SSF51735 1 240 9.34E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PANTHER PTHR24322 163 194 2.0E-81 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 PANTHER PTHR24322 10 145 2.0E-81 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 Pfam PF00106 short chain dehydrogenase 6 196 5.1E-38 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 Gene3D G3DSA:3.40.50.720 2 243 6.3E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10625 75aeb2c82f7c39bb7cab825c0fa0a062 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 SUPERFAMILY SSF53474 1 275 5.09E-62 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 Gene3D G3DSA:3.40.50.1820 3 275 6.4E-74 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 6.2E-10 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.2E-10 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.2E-10 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 PANTHER PTHR10992 4 276 3.8E-133 T 26-04-2016 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 PANTHER PTHR10992:SF859 4 276 3.8E-133 T 26-04-2016 PAM18_RS11595 6819ac26c117e44347677bdb0f398c47 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 1.5E-24 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 PANTHER PTHR11552:SF14 7 540 3.0E-240 T 26-04-2016 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 PANTHER PTHR11552 7 540 3.0E-240 T 26-04-2016 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 SUPERFAMILY SSF51905 6 296 3.17E-89 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 SUPERFAMILY SSF51905 482 541 3.17E-89 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 90 113 - T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 Gene3D G3DSA:3.50.50.60 476 539 7.4E-121 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 Gene3D G3DSA:3.50.50.60 5 134 7.4E-121 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 Gene3D G3DSA:3.50.50.60 195 321 7.4E-121 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 Pfam PF00732 GMC oxidoreductase 9 302 2.0E-86 T 26-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 SUPERFAMILY SSF54373 298 483 1.57E-50 T 26-04-2016 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 PIRSF PIRSF000137 1 545 8.8E-150 T 26-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 PAM18_RS04280 0bc93161c8aa5d93631e08d8680151a2 559 Pfam PF05199 GMC oxidoreductase 397 533 7.7E-43 T 26-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 Gene3D G3DSA:3.30.110.40 3 77 1.7E-29 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 Pfam PF01206 Sulfurtransferase TusA 8 76 3.3E-24 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 PANTHER PTHR33279 4 76 5.2E-39 T 26-04-2016 PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 SUPERFAMILY SSF64307 4 76 2.62E-25 T 26-04-2016 IPR001455 TusA-like domain PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 PANTHER PTHR33279:SF5 4 76 5.2E-39 T 26-04-2016 PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 26-04-2016 IPR001455 TusA-like domain PAM18_RS17850 2aa12a5758b629c8b53c113002cedee0 79 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 78 25.787 T 26-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 PAM18_RS23765 d5d04df6c8387db7f9cd224dcbc8dd24 314 PANTHER PTHR30426 1 311 7.9E-161 T 26-04-2016 PAM18_RS23765 d5d04df6c8387db7f9cd224dcbc8dd24 314 Pfam PF02401 LytB protein 3 283 1.3E-92 T 26-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PAM18_RS23765 d5d04df6c8387db7f9cd224dcbc8dd24 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 5.2E-100 T 26-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PAM18_RS23765 d5d04df6c8387db7f9cd224dcbc8dd24 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.006 T 26-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 Pfam PF00582 Universal stress protein family 1 149 1.3E-32 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 SUPERFAMILY SSF52402 1 150 3.89E-34 T 26-04-2016 PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 PANTHER PTHR31964 1 151 2.5E-32 T 26-04-2016 PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-20 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 127 149 1.4E-20 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 109 121 1.4E-20 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 Gene3D G3DSA:3.40.50.620 1 150 7.3E-36 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS08505 435bf2c8bd6046df6b5c8f11431d9c5b 151 PANTHER PTHR31964:SF45 1 151 2.5E-32 T 26-04-2016 PAM18_RS12425 d962daaace5854efbe24890f872285d2 200 SUPERFAMILY SSF55469 5 199 1.57E-73 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS12425 d962daaace5854efbe24890f872285d2 200 Gene3D G3DSA:3.40.109.10 5 199 1.1E-73 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 PAM18_RS12425 d962daaace5854efbe24890f872285d2 200 PANTHER PTHR23026 1 198 2.2E-92 T 26-04-2016 PAM18_RS12425 d962daaace5854efbe24890f872285d2 200 Pfam PF00881 Nitroreductase family 9 177 3.1E-20 T 26-04-2016 IPR029479 Nitroreductase PAM18_RS12425 d962daaace5854efbe24890f872285d2 200 PANTHER PTHR23026:SF89 1 198 2.2E-92 T 26-04-2016 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 PANTHER PTHR11122 1 277 1.4E-94 T 26-04-2016 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 PANTHER PTHR11122:SF14 1 277 1.4E-94 T 26-04-2016 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 SUPERFAMILY SSF74650 18 277 4.65E-50 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 Pfam PF01263 Aldose 1-epimerase 29 277 9.7E-31 T 26-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 PIRSF PIRSF016020 3 283 3.7E-89 T 26-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 PAM18_RS09160 51ca7e49ee6257436a9da6b1e9a60625 283 Gene3D G3DSA:2.70.98.10 24 277 1.3E-51 T 26-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 SUPERFAMILY SSF54637 2 139 1.25E-28 T 26-04-2016 IPR029069 HotDog domain PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 PANTHER PTHR21660:SF7 9 143 3.6E-37 T 26-04-2016 PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 PANTHER PTHR21660 9 143 3.6E-37 T 26-04-2016 PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 123 2.3E-18 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 Pfam PF03061 Thioesterase superfamily 50 123 3.1E-17 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS04920 28e6497e4e007ad60a501136f9fecae9 143 Gene3D G3DSA:3.10.129.10 10 139 1.1E-33 T 26-04-2016 IPR029069 HotDog domain PAM18_RS11980 e01916b27c466b8a9d40dbe88b481452 331 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 26-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 PAM18_RS11980 e01916b27c466b8a9d40dbe88b481452 331 PANTHER PTHR11432:SF8 1 327 4.6E-234 T 26-04-2016 PAM18_RS11980 e01916b27c466b8a9d40dbe88b481452 331 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 329 23.413 T 26-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PAM18_RS11980 e01916b27c466b8a9d40dbe88b481452 331 Pfam PF00146 NADH dehydrogenase 17 322 3.0E-115 T 26-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PAM18_RS11980 e01916b27c466b8a9d40dbe88b481452 331 PANTHER PTHR11432 1 327 4.6E-234 T 26-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PAM18_RS22530 388913e42d4a9cbd823707ceeb561321 249 PANTHER PTHR38480 20 247 2.9E-94 T 26-04-2016 PAM18_RS22530 388913e42d4a9cbd823707ceeb561321 249 Pfam PF06271 RDD family 39 149 1.9E-19 T 26-04-2016 IPR010432 RDD PAM18_RS22530 388913e42d4a9cbd823707ceeb561321 249 PANTHER PTHR38480:SF1 20 247 2.9E-94 T 26-04-2016 PAM18_RS28945 071653b0d50ba128030902b7cd06de54 414 SUPERFAMILY SSF56601 43 413 1.18E-87 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS28945 071653b0d50ba128030902b7cd06de54 414 PANTHER PTHR22935:SF2 84 414 4.9E-159 T 26-04-2016 PAM18_RS28945 071653b0d50ba128030902b7cd06de54 414 Gene3D G3DSA:3.40.710.10 92 394 3.3E-51 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS28945 071653b0d50ba128030902b7cd06de54 414 PANTHER PTHR22935 84 414 4.9E-159 T 26-04-2016 PAM18_RS28945 071653b0d50ba128030902b7cd06de54 414 Pfam PF00144 Beta-lactamase 95 408 3.6E-56 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 Pfam PF00771 FHIPEP family 31 696 3.0E-267 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 704 4.3E-261 T 26-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 26-04-2016 IPR025505 FHIPEP conserved site PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-55 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PANTHER PTHR30161:SF1 3 707 0.0 T 26-04-2016 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PANTHER PTHR30161 3 707 0.0 T 26-04-2016 PAM18_RS18825 568e3e52fe935e2cea711c9c8910f812 707 PIRSF PIRSF005419 7 707 1.3E-248 T 26-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 Gene3D G3DSA:3.90.1150.10 353 463 6.5E-9 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 SMART SM00345 7 66 7.5E-21 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 Pfam PF00155 Aminotransferase class I and II 105 461 4.8E-36 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 Gene3D G3DSA:3.40.640.10 135 352 5.3E-67 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 PANTHER PTHR11751 83 470 1.1E-225 T 26-04-2016 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 Gene3D G3DSA:1.10.10.10 1 66 9.1E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 SUPERFAMILY SSF53383 86 463 8.11E-97 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.5E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 PANTHER PTHR11751:SF275 83 470 1.1E-225 T 26-04-2016 PAM18_RS15445 61113b139f640f11ebc5f90a8e7f67eb 474 SUPERFAMILY SSF46785 1 74 4.31E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21500 a19533a5a9d9274d1a19d27451405161 277 Pfam PF10118 Predicted metal-dependent hydrolase 13 257 9.5E-89 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS21500 a19533a5a9d9274d1a19d27451405161 277 PIRSF PIRSF007580 1 277 1.5E-100 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS21500 a19533a5a9d9274d1a19d27451405161 277 PANTHER PTHR39456 1 277 8.1E-169 T 26-04-2016 PAM18_RS21500 a19533a5a9d9274d1a19d27451405161 277 PANTHER PTHR39456:SF2 1 277 8.1E-169 T 26-04-2016 PAM18_RS06870 148a128c89ab32672a1080cfc59ce666 60 SUPERFAMILY SSF54786 1 60 2.39E-14 T 26-04-2016 PAM18_RS06870 148a128c89ab32672a1080cfc59ce666 60 Gene3D G3DSA:3.30.920.30 1 60 1.3E-14 T 26-04-2016 PAM18_RS06870 148a128c89ab32672a1080cfc59ce666 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 8.7E-12 T 26-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 PANTHER PTHR11496:SF79 12 386 1.2E-149 T 26-04-2016 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 SUPERFAMILY SSF56796 11 384 2.75E-118 T 26-04-2016 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 15 379 1.6E-114 T 26-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 PANTHER PTHR11496 12 386 1.2E-149 T 26-04-2016 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:1.20.1090.10 189 386 1.0E-59 T 26-04-2016 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:3.40.50.1970 12 187 2.2E-55 T 26-04-2016 PAM18_RS15655 8e34a874f00a42364c9881ab5fa0c121 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 26-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 PANTHER PTHR24220:SF455 3 300 2.7E-165 T 26-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.40.50.300 1 236 3.1E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28745 45f94421b1599785156c0c193397700a 335 Pfam PF09383 NIL domain 264 333 4.9E-19 T 26-04-2016 IPR018449 NIL domain PAM18_RS28745 45f94421b1599785156c0c193397700a 335 PANTHER PTHR24220 3 300 2.7E-165 T 26-04-2016 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 SMART SM00382 30 219 2.7E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS28745 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF55021 262 334 9.27E-17 T 26-04-2016 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 SMART SM00930 261 334 8.6E-25 T 26-04-2016 IPR018449 NIL domain PAM18_RS28745 45f94421b1599785156c0c193397700a 335 Pfam PF00005 ABC transporter 22 170 6.7E-36 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF52540 1 241 6.81E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28745 45f94421b1599785156c0c193397700a 335 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS28745 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.30.70.260 237 335 1.3E-24 T 26-04-2016 PAM18_RS28975 f600d9fec3318524f710a6017621f79d 244 TIGRFAM TIGR04539 tRNA_cyclodipep: tRNA-dependent cyclodipeptide synthase 22 238 1.7E-50 T 26-04-2016 IPR030903 Cyclodileucine synthase GO:0016755 PAM18_RS28975 f600d9fec3318524f710a6017621f79d 244 Pfam PF16715 Cyclodipeptide synthase 35 194 1.1E-13 T 26-04-2016 IPR030903 Cyclodileucine synthase GO:0016755 PAM18_RS13060 9486540aacda4d5aa0a6709f34a7923b 448 PANTHER PTHR34596 6 448 5.8E-170 T 26-04-2016 PAM18_RS13060 9486540aacda4d5aa0a6709f34a7923b 448 Pfam PF03573 outer membrane porin, OprD family 35 446 9.2E-147 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS13060 9486540aacda4d5aa0a6709f34a7923b 448 Gene3D G3DSA:2.40.160.10 41 448 1.0E-138 T 26-04-2016 IPR023614 Porin domain PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF05593 RHS Repeat 927 965 7.2E-5 T 26-04-2016 IPR031325 RHS repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF05593 RHS Repeat 636 671 4.7E-6 T 26-04-2016 IPR031325 RHS repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF05593 RHS Repeat 531 566 1.1E-6 T 26-04-2016 IPR031325 RHS repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF05593 RHS Repeat 489 524 4.4E-8 T 26-04-2016 IPR031325 RHS repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF05593 RHS Repeat 595 630 3.0E-6 T 26-04-2016 IPR031325 RHS repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305 3 774 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305 1217 1317 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305 881 1003 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305 1019 1191 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PRINTS PR00394 RHS protein signature 1135 1154 4.1E-16 T 26-04-2016 IPR001826 RHS protein PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PRINTS PR00394 RHS protein signature 1059 1079 4.1E-16 T 26-04-2016 IPR001826 RHS protein PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PRINTS PR00394 RHS protein signature 1112 1132 4.1E-16 T 26-04-2016 IPR001826 RHS protein PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 SUPERFAMILY SSF69304 627 701 1.14E-5 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 SUPERFAMILY SSF69304 496 587 1.14E-5 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1105 1168 7.4E-24 T 26-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 367 399 7.5E-5 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 489 528 5.9E-7 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 669 4.3E-7 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 531 570 5.6E-8 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 594 634 2.1E-7 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 381 415 9.9E-5 T 26-04-2016 IPR006530 YD repeat PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 Pfam PF03527 RHS protein 1065 1101 2.0E-14 T 26-04-2016 IPR001826 RHS protein PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305:SF6 3 774 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305:SF6 1217 1317 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305:SF6 881 1003 0.0 T 26-04-2016 PAM18_RS11760 4e0a1abe89739c9b8e975951348157c6 1317 PANTHER PTHR32305:SF6 1019 1191 0.0 T 26-04-2016 PAM18_RS22425 cc0b087cbee4c7e20e5234f83da86a54 94 Pfam PF12266 Protein of unknown function (DUF3613) 21 87 1.8E-30 T 26-04-2016 IPR022053 Protein of unknown function DUF3613 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 PANTHER PTHR30460:SF0 1 735 0.0 T 26-04-2016 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF82689 612 712 7.72E-12 T 26-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 Pfam PF00924 Mechanosensitive ion channel 504 703 7.5E-39 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF50182 547 610 1.83E-12 T 26-04-2016 IPR010920 LSM domain PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 Gene3D G3DSA:2.30.30.60 564 609 6.1E-12 T 26-04-2016 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF82861 463 545 1.44E-13 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PAM18_RS26765 624b09a51b744214f9b2c7fa90477e43 735 PANTHER PTHR30460 1 735 0.0 T 26-04-2016 PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 SUPERFAMILY SSF103473 7 426 2.09E-60 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 PANTHER PTHR23508:SF5 5 424 1.8E-281 T 26-04-2016 PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 Pfam PF00083 Sugar (and other) transporter 27 237 1.5E-20 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 Gene3D G3DSA:1.20.1250.20 22 229 9.6E-21 T 26-04-2016 PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 Gene3D G3DSA:1.20.1250.20 249 429 3.3E-13 T 26-04-2016 PAM18_RS28070 5ce35913228bf663ec3773234df416e3 438 PANTHER PTHR23508 5 424 1.8E-281 T 26-04-2016 PAM18_RS28950 4f5069d8d8f88cf18c60ee2a8df63b18 132 Pfam PF08905 Domain of unknown function (DUF1850) 21 105 1.7E-22 T 26-04-2016 IPR015001 Protein of unknown function DUF1850 PAM18_RS17785 ae37399929da3ab9fb51af236c78653c 113 PIRSF PIRSF021239 1 113 3.2E-54 T 26-04-2016 IPR007437 Putative member of DMT superfamily PAM18_RS17785 ae37399929da3ab9fb51af236c78653c 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 8.5E-47 T 26-04-2016 IPR007437 Putative member of DMT superfamily PAM18_RS17785 ae37399929da3ab9fb51af236c78653c 113 PANTHER PTHR38482 1 112 3.8E-59 T 26-04-2016 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 PANTHER PTHR10742 24 479 8.0E-174 T 26-04-2016 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 SUPERFAMILY SSF54373 297 401 1.5E-17 T 26-04-2016 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 SUPERFAMILY SSF51905 26 316 1.78E-55 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 SUPERFAMILY SSF51905 413 456 1.78E-55 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 Gene3D G3DSA:3.50.50.60 25 103 1.1E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 Gene3D G3DSA:3.50.50.60 218 314 1.1E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 Gene3D G3DSA:3.50.50.60 412 458 1.1E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 Pfam PF01593 Flavin containing amine oxidoreductase 37 452 2.5E-47 T 26-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 PANTHER PTHR10742:SF255 24 479 8.0E-174 T 26-04-2016 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 434 451 1.6E-10 T 26-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 403 425 1.6E-10 T 26-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 1.6E-10 T 26-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PAM18_RS02130 b6f9f92e232572fdf2cc930855c6e74f 496 Gene3D G3DSA:1.10.405.10 123 209 2.8E-5 T 26-04-2016 PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 Gene3D G3DSA:2.130.10.10 441 515 2.5E-10 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 Gene3D G3DSA:2.130.10.10 212 265 2.5E-10 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 Gene3D G3DSA:2.120.10.30 22 144 1.2E-5 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 SUPERFAMILY SSF50998 427 511 5.18E-22 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 SUPERFAMILY SSF50998 19 121 5.18E-22 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS18950 5d4239518d0156d907a289d04488eb2a 529 SUPERFAMILY SSF50998 207 262 5.18E-22 T 26-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily PAM18_RS20770 837454363ec04cbb9713d3f1c6e376c8 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 5.0E-91 T 26-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 PAM18_RS20770 837454363ec04cbb9713d3f1c6e376c8 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 3.1E-44 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS20770 837454363ec04cbb9713d3f1c6e376c8 231 PANTHER PTHR30625:SF3 10 229 5.2E-76 T 26-04-2016 PAM18_RS20770 837454363ec04cbb9713d3f1c6e376c8 231 PANTHER PTHR30625 10 229 5.2E-76 T 26-04-2016 PAM18_RS12210 3531513b7f54c166575eea623ed783c5 360 PANTHER PTHR30011 1 357 6.8E-200 T 26-04-2016 PAM18_RS12210 3531513b7f54c166575eea623ed783c5 360 Pfam PF00296 Luciferase-like monooxygenase 12 322 1.2E-76 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12210 3531513b7f54c166575eea623ed783c5 360 SUPERFAMILY SSF51679 12 350 2.22E-80 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12210 3531513b7f54c166575eea623ed783c5 360 Gene3D G3DSA:3.20.20.30 1 355 2.1E-87 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12210 3531513b7f54c166575eea623ed783c5 360 PANTHER PTHR30011:SF29 1 357 6.8E-200 T 26-04-2016 PAM18_RS14650 cff741a86bde02a7d1a087c0e21d0b6e 169 SUPERFAMILY SSF47240 1 150 1.11E-47 T 26-04-2016 IPR009078 Ferritin-like superfamily PAM18_RS14650 cff741a86bde02a7d1a087c0e21d0b6e 169 PANTHER PTHR30565 1 169 3.4E-106 T 26-04-2016 PAM18_RS14650 cff741a86bde02a7d1a087c0e21d0b6e 169 Gene3D G3DSA:1.20.1260.10 1 160 3.3E-52 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS14650 cff741a86bde02a7d1a087c0e21d0b6e 169 Pfam PF05974 Domain of unknown function (DUF892) 5 157 1.9E-50 T 26-04-2016 IPR010287 Domain of unknown function DUF892 PAM18_RS14650 cff741a86bde02a7d1a087c0e21d0b6e 169 PANTHER PTHR30565:SF1 1 169 3.4E-106 T 26-04-2016 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 SUPERFAMILY SSF56935 32 710 2.14E-111 T 26-04-2016 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 PANTHER PTHR32552:SF13 1 708 0.0 T 26-04-2016 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 Gene3D G3DSA:2.170.130.10 30 165 3.9E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 Pfam PF00593 TonB dependent receptor 452 706 3.9E-26 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 PANTHER PTHR32552 1 708 0.0 T 26-04-2016 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 Gene3D G3DSA:2.40.170.20 166 706 5.1E-92 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS14140 c3e200b90f7034dd7a00ba788db0f14a 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 8.8E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS00700 391542e997b54db9f0d3f8f6c2dfe289 308 PANTHER PTHR32196:SF33 10 307 6.6E-136 T 26-04-2016 PAM18_RS00700 391542e997b54db9f0d3f8f6c2dfe289 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 282 5.3E-38 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS00700 391542e997b54db9f0d3f8f6c2dfe289 308 PANTHER PTHR32196 10 307 6.6E-136 T 26-04-2016 PAM18_RS11305 2552c98b6cac2922e43d4a28fa162e77 293 SUPERFAMILY SSF54909 1 284 1.27E-74 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS11305 2552c98b6cac2922e43d4a28fa162e77 293 PANTHER PTHR30521:SF0 35 283 7.0E-75 T 26-04-2016 PAM18_RS11305 2552c98b6cac2922e43d4a28fa162e77 293 PANTHER PTHR30521 35 283 7.0E-75 T 26-04-2016 PAM18_RS11305 2552c98b6cac2922e43d4a28fa162e77 293 Pfam PF04261 Dyp-type peroxidase family 35 281 3.7E-35 T 26-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- PAM18_RS11305 2552c98b6cac2922e43d4a28fa162e77 293 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 282 1.0E-71 T 26-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- PAM18_RS02375 2dc358064b21e98de134db18a151caef 285 SUPERFAMILY SSF81606 203 223 2.88E-7 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS02375 2dc358064b21e98de134db18a151caef 285 SUPERFAMILY SSF81606 15 150 2.88E-7 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS02375 2dc358064b21e98de134db18a151caef 285 Gene3D G3DSA:3.60.40.10 9 153 2.3E-5 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS02375 2dc358064b21e98de134db18a151caef 285 Pfam PF13672 Protein phosphatase 2C 8 253 1.3E-42 T 26-04-2016 PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 SMART SM00062 21 243 7.6E-4 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 Gene3D G3DSA:3.40.190.10 127 175 9.9E-4 T 26-04-2016 PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 241 4.4E-22 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 SUPERFAMILY SSF53850 22 240 7.86E-39 T 26-04-2016 PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 Gene3D G3DSA:3.40.190.10 27 126 2.0E-16 T 26-04-2016 PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 PANTHER PTHR35936 6 243 2.8E-38 T 26-04-2016 PAM18_RS02285 a2f7c10c094b080302b10dd253beedb2 243 PANTHER PTHR35936:SF3 6 243 2.8E-38 T 26-04-2016 PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 SUPERFAMILY SSF53335 86 448 6.58E-77 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 28 450 66.545 T 26-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 272 442 4.4E-59 T 26-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Gene3D G3DSA:2.40.50.140 22 97 2.1E-18 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 26-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 PANTHER PTHR11061:SF30 23 448 1.1E-125 T 26-04-2016 PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 PANTHER PTHR11061 23 448 1.1E-125 T 26-04-2016 PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 26-04-2016 IPR030390 RNA methyltransferase TrmA, active site PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Gene3D G3DSA:3.40.50.150 271 448 4.0E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 SUPERFAMILY SSF50249 17 74 9.71E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS20960 2c56f9c97c60e0ab64fe152ee7dcb1c3 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 109 446 4.0E-25 T 26-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 Pfam PF01266 FAD dependent oxidoreductase 23 344 1.4E-46 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PANTHER PTHR11985:SF1 4 520 2.3E-174 T 26-04-2016 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 Gene3D G3DSA:3.50.50.60 21 291 4.6E-37 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 414 505 4.5E-13 T 26-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PANTHER PTHR11985 4 520 2.3E-174 T 26-04-2016 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 SUPERFAMILY SSF51905 22 345 3.78E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 365 377 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS09945 7a1cdc85661451614c2dba612ea2dfaf 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 334 340 2.0E-22 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 2 117 8.0E-12 T 26-04-2016 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 130 248 2.7E-11 T 26-04-2016 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 PANTHER PTHR38042 1 247 1.5E-84 T 26-04-2016 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 244 4.1E-37 T 26-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 PANTHER PTHR38042:SF1 1 247 1.5E-84 T 26-04-2016 PAM18_RS27490 24493688c939210274733bc17a4d6305 251 SUPERFAMILY SSF69618 3 249 5.75E-55 T 26-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 8.4E-118 T 26-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 SUPERFAMILY SSF48179 164 291 1.81E-37 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.9E-50 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 2.0E-35 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 Gene3D G3DSA:3.40.50.720 1 163 1.2E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 Gene3D G3DSA:1.10.1040.10 165 292 6.1E-40 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 PANTHER PTHR22981:SF70 1 296 4.4E-134 T 26-04-2016 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 PANTHER PTHR22981 1 296 4.4E-134 T 26-04-2016 PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 SUPERFAMILY SSF51735 2 162 2.21E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18585 8c8d88628e26e3bbe9ca32b77105d3e2 296 PIRSF PIRSF000103 1 291 1.2E-74 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS24390 39b2b60d70e6cf77797bb694e75954cd 430 ProDom PD140749 ORF PHAGE PA0727 1 429 0.0 T 26-04-2016 PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 Gene3D G3DSA:3.40.50.1820 28 318 2.5E-64 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 PANTHER PTHR10992 25 95 6.7E-59 T 26-04-2016 PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 PANTHER PTHR10992 115 319 6.7E-59 T 26-04-2016 PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 PANTHER PTHR10992:SF732 25 95 6.7E-59 T 26-04-2016 PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 PANTHER PTHR10992:SF732 115 319 6.7E-59 T 26-04-2016 PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 SUPERFAMILY SSF53474 26 317 9.21E-60 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS07200 ef7f2ec25cc70415bae7dae92885fdd3 328 Pfam PF00561 alpha/beta hydrolase fold 49 299 4.2E-18 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS12345 45e3dd9d54879edaf3aa4ec4400e2aa7 404 Gene3D G3DSA:1.20.1250.20 221 399 4.5E-16 T 26-04-2016 PAM18_RS12345 45e3dd9d54879edaf3aa4ec4400e2aa7 404 Pfam PF07690 Major Facilitator Superfamily 28 362 5.9E-38 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS12345 45e3dd9d54879edaf3aa4ec4400e2aa7 404 Gene3D G3DSA:1.20.1250.20 19 192 1.2E-22 T 26-04-2016 PAM18_RS12345 45e3dd9d54879edaf3aa4ec4400e2aa7 404 PANTHER PTHR23536 1 403 4.8E-83 T 26-04-2016 PAM18_RS12345 45e3dd9d54879edaf3aa4ec4400e2aa7 404 SUPERFAMILY SSF103473 17 402 4.58E-49 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS11400 af6ff79161253c9f06e12bcefc316b3f 299 PANTHER PTHR30213 1 297 4.6E-87 T 26-04-2016 PAM18_RS11400 af6ff79161253c9f06e12bcefc316b3f 299 PIRSF PIRSF035875 7 296 2.4E-88 T 26-04-2016 IPR017039 Virulence factor BrkB PAM18_RS11400 af6ff79161253c9f06e12bcefc316b3f 299 PANTHER PTHR30213:SF1 1 297 4.6E-87 T 26-04-2016 PAM18_RS11400 af6ff79161253c9f06e12bcefc316b3f 299 Pfam PF03631 Virulence factor BrkB 24 276 3.4E-72 T 26-04-2016 IPR017039 Virulence factor BrkB PAM18_RS11400 af6ff79161253c9f06e12bcefc316b3f 299 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 275 2.0E-44 T 26-04-2016 IPR017039 Virulence factor BrkB PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 PANTHER PTHR35568:SF1 1 210 7.3E-95 T 26-04-2016 PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 110 7.0E-54 T 26-04-2016 IPR013559 YheO-like PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 Pfam PF13309 HTH domain 142 203 2.0E-16 T 26-04-2016 PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 Pfam PF08348 YheO-like PAS domain 9 114 2.9E-27 T 26-04-2016 IPR013559 YheO-like PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 PANTHER PTHR35568 1 210 7.3E-95 T 26-04-2016 PAM18_RS05450 eea8eb6d2c72abdae83b6568829e8696 210 Gene3D G3DSA:1.10.10.10 159 209 5.0E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 PANTHER PTHR11751 10 382 9.3E-121 T 26-04-2016 PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 PANTHER PTHR11751:SF294 10 382 9.3E-121 T 26-04-2016 PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 Gene3D G3DSA:3.90.1150.10 244 381 5.9E-26 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 SUPERFAMILY SSF53383 2 381 7.7E-94 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 Pfam PF00155 Aminotransferase class I and II 51 375 3.1E-30 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS17390 6c0070c70575939676b20768985c0c1f 388 Gene3D G3DSA:3.40.640.10 48 243 1.8E-47 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS26170 dc7d70883ee570b5af727da28db1df4c 318 SUPERFAMILY SSF53756 45 295 1.07E-9 T 26-04-2016 PAM18_RS26170 dc7d70883ee570b5af727da28db1df4c 318 Pfam PF13524 Glycosyl transferases group 1 212 288 1.5E-8 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Gene3D G3DSA:3.40.50.980 18 220 1.6E-38 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Gene3D G3DSA:3.30.300.30 453 552 6.1E-34 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Gene3D G3DSA:2.30.38.10 374 447 8.6E-29 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 SUPERFAMILY SSF56801 16 552 3.79E-157 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 540 7.3E-18 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Gene3D G3DSA:3.40.50.980 221 366 2.5E-47 T 26-04-2016 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 Pfam PF00501 AMP-binding enzyme 24 456 5.2E-102 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS12790 54cedb792b9927db9e06c7abc26e0b35 564 PANTHER PTHR24095 4 557 1.3E-197 T 26-04-2016 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 PANTHER PTHR11098 1 398 3.6E-219 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 SUPERFAMILY SSF54675 5 139 5.3E-42 T 26-04-2016 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 PANTHER PTHR11098:SF16 1 398 3.6E-219 T 26-04-2016 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 Gene3D G3DSA:3.20.140.10 3 380 2.0E-146 T 26-04-2016 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 399 51.346 T 26-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 SUPERFAMILY SSF51690 122 397 2.35E-91 T 26-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 PIRSF PIRSF000484 1 383 1.7E-64 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 398 4.8E-155 T 26-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS25740 348272fdea833b8360d27a71981dafe9 399 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 398 1.6E-88 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 PAM18_RS05335 d7b18f6228a636d41f91673eec0835f9 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 213 5.7E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05335 d7b18f6228a636d41f91673eec0835f9 220 SUPERFAMILY SSF161098 12 203 4.84E-36 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05335 d7b18f6228a636d41f91673eec0835f9 220 PANTHER PTHR30177 1 217 8.6E-87 T 26-04-2016 PAM18_RS05335 d7b18f6228a636d41f91673eec0835f9 220 Gene3D G3DSA:1.10.3720.10 11 204 1.0E-31 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05335 d7b18f6228a636d41f91673eec0835f9 220 PANTHER PTHR30177:SF4 1 217 8.6E-87 T 26-04-2016 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 PANTHER PTHR32027 1 423 1.1E-180 T 26-04-2016 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 Pfam PF07969 Amidohydrolase family 42 398 1.2E-51 T 26-04-2016 IPR013108 Amidohydrolase 3 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 Gene3D G3DSA:3.20.20.140 59 361 1.5E-121 T 26-04-2016 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 PANTHER PTHR32027:SF0 1 423 1.1E-180 T 26-04-2016 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 Gene3D G3DSA:2.30.40.10 17 58 3.3E-6 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 SUPERFAMILY SSF51338 361 406 1.86E-5 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 SUPERFAMILY SSF51338 17 51 1.86E-5 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 PAM18_RS02210 bf2a44e638f4741b236bae2a0febe049 423 SUPERFAMILY SSF51556 51 370 5.83E-104 T 26-04-2016 IPR032466 Metal-dependent hydrolase PAM18_RS14515 4642fb3d1cf76d2b985f1e09de9e4b86 337 PANTHER PTHR30349:SF7 1 326 8.0E-184 T 26-04-2016 PAM18_RS14515 4642fb3d1cf76d2b985f1e09de9e4b86 337 PANTHER PTHR30349 1 326 8.0E-184 T 26-04-2016 PAM18_RS14515 4642fb3d1cf76d2b985f1e09de9e4b86 337 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 332 4.0E-12 T 26-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PAM18_RS14515 4642fb3d1cf76d2b985f1e09de9e4b86 337 PIRSF PIRSF017082 1 337 1.3E-74 T 26-04-2016 IPR005064 Bordetella uptake gene GO:0030288 PAM18_RS10220 6cb7ea6cb8302cbaa0b93e18acc28fde 178 PANTHER PTHR38099 2 175 1.8E-79 T 26-04-2016 PAM18_RS10220 6cb7ea6cb8302cbaa0b93e18acc28fde 178 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.4E-18 T 26-04-2016 IPR003772 Protein of unknown function DUF177 PAM18_RS26470 b5e83c517d53f17f1fcfc70f9a0440e1 138 PANTHER PTHR38664 1 138 4.7E-32 T 26-04-2016 PAM18_RS26470 b5e83c517d53f17f1fcfc70f9a0440e1 138 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 13 135 1.3E-46 T 26-04-2016 IPR008769 Poly granule associated PAM18_RS26470 b5e83c517d53f17f1fcfc70f9a0440e1 138 PANTHER PTHR38664:SF1 1 138 4.7E-32 T 26-04-2016 PAM18_RS26470 b5e83c517d53f17f1fcfc70f9a0440e1 138 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 21 136 2.2E-42 T 26-04-2016 IPR008769 Poly granule associated PAM18_RS28635 18663f7b5d7c1398f5206fe0f20cd400 155 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 38 153 7.8E-46 T 26-04-2016 PAM18_RS28635 18663f7b5d7c1398f5206fe0f20cd400 155 PIRSF PIRSF009103 1 155 1.1E-67 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS28635 18663f7b5d7c1398f5206fe0f20cd400 155 SUPERFAMILY SSF89872 27 155 3.66E-50 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS28635 18663f7b5d7c1398f5206fe0f20cd400 155 Gene3D G3DSA:3.40.1420.10 28 155 2.1E-47 T 26-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 PAM18_RS05915 af3b96c7e83e351471199bf2057f7031 385 Gene3D G3DSA:1.20.1250.20 21 202 1.1E-12 T 26-04-2016 PAM18_RS05915 af3b96c7e83e351471199bf2057f7031 385 Pfam PF07690 Major Facilitator Superfamily 32 348 4.4E-11 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS05915 af3b96c7e83e351471199bf2057f7031 385 SUPERFAMILY SSF103473 18 384 4.05E-33 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS05915 af3b96c7e83e351471199bf2057f7031 385 Gene3D G3DSA:1.20.1250.20 211 382 1.4E-10 T 26-04-2016 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 PANTHER PTHR13707 1 265 5.6E-143 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 SUPERFAMILY SSF100950 4 277 2.51E-78 T 26-04-2016 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 PANTHER PTHR13707:SF33 1 265 5.6E-143 T 26-04-2016 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 SMART SM00882 4 224 9.1E-47 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 Pfam PF01144 Coenzyme A transferase 6 216 1.9E-24 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 Gene3D G3DSA:3.40.1080.10 158 279 2.7E-85 T 26-04-2016 PAM18_RS01120 2b6d8f0694a1da5ccbdea59b6bb32c1d 283 Gene3D G3DSA:3.40.1080.10 4 120 2.7E-85 T 26-04-2016 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 PANTHER PTHR23502 1 390 2.1E-152 T 26-04-2016 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 Pfam PF07690 Major Facilitator Superfamily 15 348 5.4E-37 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 SUPERFAMILY SSF103473 3 389 1.83E-58 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 380 9.4E-90 T 26-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 Gene3D G3DSA:1.20.1250.20 5 183 1.6E-26 T 26-04-2016 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 PANTHER PTHR23502:SF19 1 390 2.1E-152 T 26-04-2016 PAM18_RS07275 de8b2590421e6ab8c7a9ad81e12ce143 392 Gene3D G3DSA:1.20.1250.20 200 382 2.3E-5 T 26-04-2016 PAM18_RS20350 4bd294f9ab97ed6b1406dd9f7881b629 115 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 17 105 8.2E-27 T 26-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PAM18_RS20350 4bd294f9ab97ed6b1406dd9f7881b629 115 Pfam PF03334 Na+/H+ antiporter subunit 17 97 3.2E-27 T 26-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PAM18_RS20350 4bd294f9ab97ed6b1406dd9f7881b629 115 PANTHER PTHR34703:SF1 7 115 9.8E-43 T 26-04-2016 PAM18_RS20350 4bd294f9ab97ed6b1406dd9f7881b629 115 PANTHER PTHR34703 7 115 9.8E-43 T 26-04-2016 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PANTHER PTHR24423 249 538 9.9E-65 T 26-04-2016 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SUPERFAMILY SSF158472 255 305 8.5E-8 T 26-04-2016 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SUPERFAMILY SSF55874 362 531 3.14E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 Gene3D G3DSA:1.10.287.130 298 359 5.1E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SMART SM00304 255 307 1.4E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SMART SM00387 422 533 4.9E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 Gene3D G3DSA:3.30.565.10 360 532 1.3E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SUPERFAMILY SSF47384 291 373 4.71E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 530 9.1E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PANTHER PTHR24423:SF564 249 538 9.9E-65 T 26-04-2016 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 Pfam PF00672 HAMP domain 235 303 2.6E-15 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 SMART SM00388 308 373 2.2E-15 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 1.3E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.3E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 1.3E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 485 1.3E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS19800 647ae4755202bb2af6a6616f71822263 538 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 373 1.5E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS20265 d0f3800acf9ae0899bb77e664943f530 120 Pfam PF16703 Domain of unknown function (DUF5064) 1 116 2.2E-52 T 26-04-2016 IPR032024 Protein of unknown function DUF5064 PAM18_RS06140 17b6b7b20634eb0cc6bb21ce96cf57b6 94 Pfam PF12021 Protein of unknown function (DUF3509) 5 88 3.6E-19 T 26-04-2016 IPR021898 Protein of unknown function DUF3509 PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 Pfam PF00583 Acetyltransferase (GNAT) family 49 126 4.5E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 PANTHER PTHR23091:SF256 1 182 3.4E-76 T 26-04-2016 PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 PANTHER PTHR23091 1 182 3.4E-76 T 26-04-2016 PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 Gene3D G3DSA:3.40.630.30 1 148 4.4E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 SUPERFAMILY SSF55729 1 146 4.8E-33 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS15900 3904d7ff0bb161536747db7f1f1276c1 365 Pfam PF11814 Peptidase_C39 like family 159 361 2.7E-92 T 26-04-2016 IPR021770 Protein of unknown function DUF3335 PAM18_RS26840 9c33f6ef3abec857e19dfeb82e633400 257 Gene3D G3DSA:3.20.20.370 24 249 7.5E-85 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 PAM18_RS26840 9c33f6ef3abec857e19dfeb82e633400 257 Pfam PF04748 Divergent polysaccharide deacetylase 35 241 2.5E-72 T 26-04-2016 IPR006837 Protein of unknown function DUF610, YibQ PAM18_RS26840 9c33f6ef3abec857e19dfeb82e633400 257 SUPERFAMILY SSF88713 31 242 1.22E-65 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PAM18_RS26840 9c33f6ef3abec857e19dfeb82e633400 257 PANTHER PTHR30105 1 257 5.9E-101 T 26-04-2016 PAM18_RS09435 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Pfam PF00011 Hsp20/alpha crystallin family 44 140 3.2E-17 T 26-04-2016 IPR002068 Alpha crystallin/Hsp20 domain PAM18_RS09435 bcf5bb6b7b5d8d3e70c8b696b6733364 149 PANTHER PTHR11527 1 147 2.5E-84 T 26-04-2016 IPR031107 Small heat shock protein HSP20 PAM18_RS09435 bcf5bb6b7b5d8d3e70c8b696b6733364 149 SUPERFAMILY SSF49764 11 141 2.51E-21 T 26-04-2016 IPR008978 HSP20-like chaperone PAM18_RS09435 bcf5bb6b7b5d8d3e70c8b696b6733364 149 PANTHER PTHR11527:SF127 1 147 2.5E-84 T 26-04-2016 PAM18_RS09435 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Gene3D G3DSA:2.60.40.790 17 140 3.0E-19 T 26-04-2016 IPR008978 HSP20-like chaperone PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.9E-67 T 26-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 Gene3D G3DSA:2.60.120.10 365 477 2.8E-44 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 PANTHER PTHR12526 360 479 6.3E-202 T 26-04-2016 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 PANTHER PTHR12526 157 297 6.3E-202 T 26-04-2016 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 Pfam PF00483 Nucleotidyl transferase 4 290 6.4E-54 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 Gene3D G3DSA:3.90.550.10 2 279 5.1E-91 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 SUPERFAMILY SSF51182 189 477 3.23E-77 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 PANTHER PTHR12526:SF357 360 479 6.3E-202 T 26-04-2016 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 PANTHER PTHR12526:SF357 157 297 6.3E-202 T 26-04-2016 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 3.0E-175 T 26-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 PAM18_RS28490 90ee3aec1647b86183dcbbabb07f3cfd 479 SUPERFAMILY SSF53448 2 286 3.18E-65 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 PANTHER PTHR23501 1 400 9.6E-267 T 26-04-2016 PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 SUPERFAMILY SSF103473 12 397 3.01E-55 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 Pfam PF07690 Major Facilitator Superfamily 26 340 8.1E-26 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 Gene3D G3DSA:1.20.1250.20 22 199 3.4E-23 T 26-04-2016 PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 Gene3D G3DSA:1.20.1250.20 218 398 9.7E-17 T 26-04-2016 PAM18_RS14465 06f0e691ef95219296b07e0166dd66fb 402 PANTHER PTHR23501:SF28 1 400 9.6E-267 T 26-04-2016 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 PANTHER PTHR30450:SF7 1 230 2.3E-168 T 26-04-2016 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 Gene3D G3DSA:1.10.3720.10 11 223 2.8E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 SUPERFAMILY SSF161098 13 208 1.96E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 223 3.4E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 3.0E-22 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS26955 8ad7c39917fa7681aa9d312d462dfcf3 230 PANTHER PTHR30450 1 230 2.3E-168 T 26-04-2016 PAM18_RS10150 44a86d43502ee9358056b7894be07ffc 177 PANTHER PTHR40547:SF1 1 177 1.3E-59 T 26-04-2016 PAM18_RS10150 44a86d43502ee9358056b7894be07ffc 177 PANTHER PTHR40547 1 177 1.3E-59 T 26-04-2016 PAM18_RS10150 44a86d43502ee9358056b7894be07ffc 177 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 2.4E-50 T 26-04-2016 IPR018639 Domain of unknown function DUF2062 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 Gene3D G3DSA:1.10.760.10 346 391 1.7E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 Gene3D G3DSA:1.10.760.10 604 624 1.7E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 Gene3D G3DSA:1.10.760.10 493 561 1.7E-7 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 SUPERFAMILY SSF46626 518 562 3.88E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 SUPERFAMILY SSF46626 344 365 3.88E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15210 4b2d8862c42e350114b80300af5a837f 624 SUPERFAMILY SSF46626 605 624 3.88E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 6.1E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.1E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 6.1E-7 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 PANTHER PTHR30204:SF17 1 132 2.2E-56 T 26-04-2016 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 Gene3D G3DSA:1.10.1660.10 5 124 2.3E-27 T 26-04-2016 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 SUPERFAMILY SSF46955 5 123 9.89E-25 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 SMART SM00422 4 72 5.1E-12 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 Pfam PF13411 MerR HTH family regulatory protein 6 67 3.3E-13 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS26740 844399290c4e638a226b8588e7e0aa3e 141 PANTHER PTHR30204 1 132 2.2E-56 T 26-04-2016 PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 Pfam PF01121 Dephospho-CoA kinase 5 181 1.1E-67 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 198 26.591 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 PANTHER PTHR10695 5 196 4.4E-71 T 26-04-2016 PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 Gene3D G3DSA:3.40.50.300 2 196 7.3E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 189 1.3E-51 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 PAM18_RS23605 7b86c803dbbefbc4c49c6190fef1d592 203 SUPERFAMILY SSF52540 4 196 1.68E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25320 80db5efc59d865505a41bb8121f2dd6f 433 Pfam PF10100 Uncharacterized protein conserved in bacteria (DUF2338) 10 429 4.3E-167 T 26-04-2016 IPR016935 Protein of unknown function DUF2338 PAM18_RS25320 80db5efc59d865505a41bb8121f2dd6f 433 Gene3D G3DSA:3.40.50.720 10 122 7.7E-6 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25320 80db5efc59d865505a41bb8121f2dd6f 433 SUPERFAMILY SSF51735 10 129 7.88E-5 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS12175 7217a17509ca7dd46210612a8c323a8c 222 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 119 - T 26-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 PAM18_RS12175 7217a17509ca7dd46210612a8c323a8c 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 215 2.4E-44 T 26-04-2016 PAM18_RS12175 7217a17509ca7dd46210612a8c323a8c 222 PANTHER PTHR23291 2 222 2.5E-119 T 26-04-2016 IPR006214 Bax inhibitor 1-related PAM18_RS12175 7217a17509ca7dd46210612a8c323a8c 222 PANTHER PTHR23291:SF37 2 222 2.5E-119 T 26-04-2016 PAM18_RS16900 78293e085cecd50a104cfda61b246034 126 SUPERFAMILY SSF52833 4 116 3.84E-16 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS16900 78293e085cecd50a104cfda61b246034 126 Gene3D G3DSA:3.40.30.10 19 112 1.2E-6 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS26400 1a2c2ca18f35c8d10923cb86a3ec12d1 479 PANTHER PTHR22726 1 348 1.2E-150 T 26-04-2016 PAM18_RS26400 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Gene3D G3DSA:3.30.2010.10 56 138 2.0E-20 T 26-04-2016 PAM18_RS26400 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Pfam PF01435 Peptidase family M48 60 249 3.0E-42 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS26400 1a2c2ca18f35c8d10923cb86a3ec12d1 479 PANTHER PTHR22726:SF9 1 348 1.2E-150 T 26-04-2016 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 Pfam PF00474 Sodium:solute symporter family 64 470 7.8E-129 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 PANTHER PTHR11819 33 540 7.6E-297 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 PANTHER PTHR11819:SF13 33 540 7.6E-297 T 26-04-2016 PAM18_RS08910 786c328242cb4e67af5967e4116c488f 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 469 1.3E-61 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS03150 c0f2251416dbe64d4f040173952e98aa 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 378 452 3.0E-24 T 26-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PAM18_RS03150 c0f2251416dbe64d4f040173952e98aa 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 104 168 6.3E-7 T 26-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PAM18_RS03150 c0f2251416dbe64d4f040173952e98aa 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 216 289 2.3E-19 T 26-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal PAM18_RS01280 04a54e9fbf31e9534fdaa3734948b34a 263 Pfam PF00665 Integrase core domain 106 219 9.9E-24 T 26-04-2016 IPR001584 Integrase, catalytic core GO:0015074 PAM18_RS01280 04a54e9fbf31e9534fdaa3734948b34a 263 SUPERFAMILY SSF53098 102 257 7.74E-37 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS01280 04a54e9fbf31e9534fdaa3734948b34a 263 Gene3D G3DSA:3.30.420.10 100 256 2.2E-34 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 PAM18_RS01280 04a54e9fbf31e9534fdaa3734948b34a 263 PANTHER PTHR32552:SF23 51 263 2.7E-93 T 26-04-2016 PAM18_RS01280 04a54e9fbf31e9534fdaa3734948b34a 263 PANTHER PTHR32552 51 263 2.7E-93 T 26-04-2016 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 PANTHER PTHR10681 1 194 5.1E-84 T 26-04-2016 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 PIRSF PIRSF000239 1 198 5.3E-54 T 26-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 192 1.4E-12 T 26-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 PANTHER PTHR10681:SF22 1 194 5.1E-84 T 26-04-2016 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF00578 AhpC/TSA family 5 138 9.6E-34 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 SUPERFAMILY SSF52833 3 193 3.43E-64 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 Gene3D G3DSA:3.40.30.10 5 160 1.4E-59 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS21410 e064d60a2d6ee4d6af486b66e49a6918 199 Gene3D G3DSA:3.30.1020.10 161 193 6.8E-13 T 26-04-2016 PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 SUPERFAMILY SSF51735 13 254 1.85E-69 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PANTHER PTHR24317 1 291 3.7E-263 T 26-04-2016 PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 253 7.4E-54 T 26-04-2016 PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PANTHER PTHR24317:SF5 1 291 3.7E-263 T 26-04-2016 PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 197 0.001 T 26-04-2016 PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 Gene3D G3DSA:3.40.50.720 4 255 4.5E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10650 ca78baf00c36a38a7e34b2ea2b105932 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.6E-29 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 PANTHER PTHR37418:SF2 107 294 3.7E-157 T 26-04-2016 PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 PANTHER PTHR37418:SF2 2 88 3.7E-157 T 26-04-2016 PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 5.2E-97 T 26-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 PANTHER PTHR37418 2 88 3.7E-157 T 26-04-2016 PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 PANTHER PTHR37418 107 294 3.7E-157 T 26-04-2016 PAM18_RS28155 9dfe4dd834806c4f85da8d254b490c49 294 Gene3D G3DSA:3.20.20.70 3 292 2.5E-112 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS28980 f3bfc0bee431c7352cb883ebb6aa623d 322 PANTHER PTHR10209:SF68 141 271 6.4E-13 T 26-04-2016 PAM18_RS28980 f3bfc0bee431c7352cb883ebb6aa623d 322 Gene3D G3DSA:2.60.120.330 132 273 1.3E-24 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS28980 f3bfc0bee431c7352cb883ebb6aa623d 322 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 186 272 4.7E-10 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS28980 f3bfc0bee431c7352cb883ebb6aa623d 322 SUPERFAMILY SSF51197 92 274 2.75E-23 T 26-04-2016 PAM18_RS28980 f3bfc0bee431c7352cb883ebb6aa623d 322 PANTHER PTHR10209 141 271 6.4E-13 T 26-04-2016 PAM18_RS20400 27c3575d8523eec7496d0eceded6eb6e 370 PANTHER PTHR33744:SF1 1 365 1.2E-145 T 26-04-2016 PAM18_RS20400 27c3575d8523eec7496d0eceded6eb6e 370 PANTHER PTHR33744 1 365 1.2E-145 T 26-04-2016 PAM18_RS20400 27c3575d8523eec7496d0eceded6eb6e 370 Pfam PF13556 PucR C-terminal helix-turn-helix domain 306 363 9.2E-18 T 26-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain PAM18_RS20400 27c3575d8523eec7496d0eceded6eb6e 370 Gene3D G3DSA:1.10.10.60 315 341 5.2E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS20400 27c3575d8523eec7496d0eceded6eb6e 370 Pfam PF05651 Putative sugar diacid recognition 4 137 1.3E-49 T 26-04-2016 IPR008599 Putative sugar diacid recognition PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 SUPERFAMILY SSF161098 67 258 1.13E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 263 5.9E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 263 1.5E-92 T 26-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 PANTHER PTHR30043 15 264 3.0E-120 T 26-04-2016 PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 PANTHER PTHR30043:SF1 15 264 3.0E-120 T 26-04-2016 PAM18_RS08140 740062ae963038aed0a7a06e2cd0f728 264 Gene3D G3DSA:1.10.3720.10 66 262 1.0E-28 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01010 1d421c59d603fcdc1e0732c4d4458a91 133 PANTHER PTHR30558 9 131 2.1E-34 T 26-04-2016 PAM18_RS01010 1d421c59d603fcdc1e0732c4d4458a91 133 PANTHER PTHR30558:SF3 9 131 2.1E-34 T 26-04-2016 PAM18_RS01010 1d421c59d603fcdc1e0732c4d4458a91 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 132 3.9E-28 T 26-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 Pfam PF00005 ABC transporter 23 182 2.1E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 PIRSF PIRSF039085 4 257 3.0E-116 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 SUPERFAMILY SSF52540 8 252 8.23E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 PANTHER PTHR24220:SF472 9 256 5.1E-168 T 26-04-2016 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 PANTHER PTHR24220 9 256 5.1E-168 T 26-04-2016 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 SMART SM00382 32 230 1.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS26940 c73a94fe37e0036f271c8ba150568efd 257 Gene3D G3DSA:3.40.50.300 6 255 2.4E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24600 6e5d15b490cdf4b8460e6e850678e86a 150 Pfam PF13511 Domain of unknown function (DUF4124) 10 67 1.4E-15 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS00390 fdfa4acfd0c6928b633e2e38f831e5c4 226 Gene3D G3DSA:3.40.1730.10 3 216 4.2E-68 T 26-04-2016 PAM18_RS00390 fdfa4acfd0c6928b633e2e38f831e5c4 226 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 5 139 5.9E-49 T 26-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PAM18_RS00390 fdfa4acfd0c6928b633e2e38f831e5c4 226 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 5 139 2.6E-47 T 26-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PAM18_RS00390 fdfa4acfd0c6928b633e2e38f831e5c4 226 PIRSF PIRSF029287 1 219 1.1E-98 T 26-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 PAM18_RS14920 efc2e8d09c95df4f92238469e421112c 174 Gene3D G3DSA:1.20.1260.10 31 163 1.8E-7 T 26-04-2016 IPR012347 Ferritin-related PAM18_RS14920 efc2e8d09c95df4f92238469e421112c 174 PANTHER PTHR38593:SF2 1 174 3.9E-101 T 26-04-2016 PAM18_RS14920 efc2e8d09c95df4f92238469e421112c 174 PANTHER PTHR38593 1 174 3.9E-101 T 26-04-2016 PAM18_RS14920 efc2e8d09c95df4f92238469e421112c 174 Pfam PF13628 Domain of unknown function (DUF4142) 34 167 1.1E-40 T 26-04-2016 IPR025419 Domain of unknown function DUF4142 PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 Gene3D G3DSA:2.30.30.60 226 272 9.9E-9 T 26-04-2016 PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 SUPERFAMILY SSF50182 219 272 5.56E-7 T 26-04-2016 IPR010920 LSM domain PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 PANTHER PTHR30221:SF7 1 274 6.3E-120 T 26-04-2016 PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF05552 Conserved TM helix 14 60 6.9E-13 T 26-04-2016 IPR008910 Conserved TM helix PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF05552 Conserved TM helix 109 154 1.2E-8 T 26-04-2016 IPR008910 Conserved TM helix PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 PANTHER PTHR30221 1 274 6.3E-120 T 26-04-2016 PAM18_RS16775 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF00924 Mechanosensitive ion channel 184 271 7.1E-9 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 Pfam PF00248 Aldo/keto reductase family 17 309 1.7E-74 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 109 127 7.4E-11 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 140 157 7.4E-11 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 45 69 7.4E-11 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 PANTHER PTHR11732 3 310 3.1E-111 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 SUPERFAMILY SSF51430 6 317 2.23E-95 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS19945 faf3a0b60d497fdc49f599e359ff194e 329 Gene3D G3DSA:3.20.20.100 13 311 7.7E-96 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain PAM18_RS18050 f921427017a1db273724bd7e8b711906 377 PANTHER PTHR38674:SF1 1 376 1.4E-145 T 26-04-2016 PAM18_RS18050 f921427017a1db273724bd7e8b711906 377 PANTHER PTHR38674 1 376 1.4E-145 T 26-04-2016 PAM18_RS18050 f921427017a1db273724bd7e8b711906 377 Pfam PF00487 Fatty acid desaturase 115 329 1.3E-26 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742:SF255 1 37 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742:SF255 72 236 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742:SF255 271 619 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 Pfam PF13450 NAD(P)-binding Rossmann-like domain 78 137 8.6E-13 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 Gene3D G3DSA:3.50.50.60 359 498 1.0E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 Gene3D G3DSA:3.50.50.60 208 244 1.0E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 Gene3D G3DSA:3.50.50.60 72 173 1.0E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742 1 37 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742 72 236 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 PANTHER PTHR10742 271 619 1.9E-189 T 26-04-2016 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 SUPERFAMILY SSF51905 67 160 2.03E-23 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS06245 f0e0dd975eb425020e3ffa940603f027 620 SUPERFAMILY SSF51905 350 441 2.03E-23 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 SUPERFAMILY SSF53613 4 281 2.96E-70 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 287 2.4E-111 T 26-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 4 288 53.575 T 26-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 PANTHER PTHR10534:SF0 1 288 1.1E-131 T 26-04-2016 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 Pfam PF08543 Phosphomethylpyrimidine kinase 77 262 2.8E-12 T 26-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 PANTHER PTHR10534 1 288 1.1E-131 T 26-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS28810 cc924e57ada58727aa98c73675208c06 290 Gene3D G3DSA:3.40.1190.20 3 286 2.0E-86 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS18455 39eb78c5e7bede4df3dde134ab513b25 91 PANTHER PTHR33677:SF1 1 91 4.1E-31 T 26-04-2016 PAM18_RS18455 39eb78c5e7bede4df3dde134ab513b25 91 PANTHER PTHR33677 1 91 4.1E-31 T 26-04-2016 PAM18_RS18455 39eb78c5e7bede4df3dde134ab513b25 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 3.5E-22 T 26-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PAM18_RS09155 027c6cc89c7f84c92770e4231eac391a 454 PANTHER PTHR37944:SF1 1 454 1.7E-221 T 26-04-2016 PAM18_RS09155 027c6cc89c7f84c92770e4231eac391a 454 Pfam PF04966 Carbohydrate-selective porin, OprB family 80 454 2.5E-119 T 26-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PAM18_RS09155 027c6cc89c7f84c92770e4231eac391a 454 PANTHER PTHR37944 1 454 1.7E-221 T 26-04-2016 PAM18_RS02730 b8488a3e0a217109d4c1ca882ef64e92 276 SUPERFAMILY SSF103481 182 275 2.22E-12 T 26-04-2016 PAM18_RS02730 b8488a3e0a217109d4c1ca882ef64e92 276 SUPERFAMILY SSF103481 38 133 9.15E-13 T 26-04-2016 PAM18_RS02730 b8488a3e0a217109d4c1ca882ef64e92 276 Pfam PF00892 EamA-like transporter family 144 274 5.2E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS02730 b8488a3e0a217109d4c1ca882ef64e92 276 PANTHER PTHR22911:SF61 6 276 1.6E-130 T 26-04-2016 PAM18_RS02730 b8488a3e0a217109d4c1ca882ef64e92 276 PANTHER PTHR22911 6 276 1.6E-130 T 26-04-2016 PAM18_RS16750 b4f08d2535fb89bcd66502a9b89f5aae 108 SUPERFAMILY SSF50022 1 103 1.57E-34 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS16750 b4f08d2535fb89bcd66502a9b89f5aae 108 Gene3D G3DSA:2.102.10.10 1 104 8.0E-30 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS16750 b4f08d2535fb89bcd66502a9b89f5aae 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 98 2.5E-15 T 26-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PAM18_RS16750 b4f08d2535fb89bcd66502a9b89f5aae 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 99 9.3E-33 T 26-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PAM18_RS16750 b4f08d2535fb89bcd66502a9b89f5aae 108 PANTHER PTHR21496 1 97 1.6E-22 T 26-04-2016 PAM18_RS25335 cd125249f00e3a6a59d420378995b87a 384 PANTHER PTHR40407 1 384 6.6E-119 T 26-04-2016 PAM18_RS25335 cd125249f00e3a6a59d420378995b87a 384 Pfam PF07786 Protein of unknown function (DUF1624) 10 218 4.1E-16 T 26-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 PAM18_RS09055 893827f6c2c84d45d6e265cac57d306b 146 Pfam PF07813 LTXXQ motif family protein 43 123 9.9E-7 T 26-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 PAM18_RS09055 893827f6c2c84d45d6e265cac57d306b 146 PANTHER PTHR38102 2 146 9.3E-53 T 26-04-2016 PAM18_RS09055 893827f6c2c84d45d6e265cac57d306b 146 PANTHER PTHR38102:SF1 2 146 9.3E-53 T 26-04-2016 PAM18_RS15385 dd8a940c9802adf48dee1a89e39f49c0 624 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 46 205 1.0E-26 T 26-04-2016 IPR024618 Domain of unknown function DUF3857 PAM18_RS15385 dd8a940c9802adf48dee1a89e39f49c0 624 Pfam PF01841 Transglutaminase-like superfamily 265 333 1.0E-6 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS15385 dd8a940c9802adf48dee1a89e39f49c0 624 SUPERFAMILY SSF54001 266 420 3.19E-12 T 26-04-2016 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 SUPERFAMILY SSF55729 63 255 3.31E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 PANTHER PTHR23091:SF122 94 267 2.3E-51 T 26-04-2016 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 280 289 - T 26-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 SUPERFAMILY SSF56059 500 578 2.53E-31 T 26-04-2016 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 SUPERFAMILY SSF56059 333 443 2.53E-31 T 26-04-2016 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Pfam PF08443 RimK-like ATP-grasp domain 332 434 4.3E-8 T 26-04-2016 IPR013651 ATP-grasp fold, RimK-type PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Gene3D G3DSA:3.30.1490.20 343 409 7.5E-10 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 PANTHER PTHR23091 94 267 2.3E-51 T 26-04-2016 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Pfam PF00583 Acetyltransferase (GNAT) family 168 249 7.5E-13 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Gene3D G3DSA:3.30.470.20 324 340 1.4E-15 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Gene3D G3DSA:3.30.470.20 492 577 1.4E-15 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Gene3D G3DSA:3.30.470.20 410 437 1.4E-15 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 40 582 4.4E-274 T 26-04-2016 IPR017534 GNAT-acetyltransferase PAM18_RS07740 f78ef244d00d02b8a54b8cad71938513 585 Gene3D G3DSA:3.40.630.30 120 253 1.8E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS10715 d561fad09d43af34b2e30309190ecaf9 317 Pfam PF01882 Protein of unknown function DUF58 213 258 6.2E-11 T 26-04-2016 IPR002881 Domain of unknown function DUF58 PAM18_RS10715 d561fad09d43af34b2e30309190ecaf9 317 PANTHER PTHR34351:SF1 9 315 6.0E-83 T 26-04-2016 PAM18_RS10715 d561fad09d43af34b2e30309190ecaf9 317 PANTHER PTHR34351 9 315 6.0E-83 T 26-04-2016 PAM18_RS14520 c45c1884db3882ea3cd89f80fa694e49 176 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 159 1.8E-16 T 26-04-2016 IPR009936 Protein of unknown function DUF1468 PAM18_RS18490 dac168a9e2ac461bf88502a99edcfadf 449 PIRSF PIRSF005353 14 449 2.4E-173 T 26-04-2016 IPR026033 Purine permease PbuG-like PAM18_RS18490 dac168a9e2ac461bf88502a99edcfadf 449 Pfam PF00860 Permease family 38 411 2.3E-50 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS18490 dac168a9e2ac461bf88502a99edcfadf 449 PANTHER PTHR11119:SF9 18 439 4.2E-173 T 26-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 PAM18_RS18490 dac168a9e2ac461bf88502a99edcfadf 449 PANTHER PTHR11119 18 439 4.2E-173 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS05150 f13ae523469464ad25a21c1c7a98560e 393 PANTHER PTHR23501 20 391 1.7E-19 T 26-04-2016 PAM18_RS05150 f13ae523469464ad25a21c1c7a98560e 393 Gene3D G3DSA:1.20.1250.20 14 187 5.0E-23 T 26-04-2016 PAM18_RS05150 f13ae523469464ad25a21c1c7a98560e 393 Pfam PF07690 Major Facilitator Superfamily 21 234 3.8E-27 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS05150 f13ae523469464ad25a21c1c7a98560e 393 SUPERFAMILY SSF103473 7 387 6.02E-50 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS05150 f13ae523469464ad25a21c1c7a98560e 393 Gene3D G3DSA:1.20.1250.20 204 387 3.9E-13 T 26-04-2016 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 3.8E-180 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 26-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 Gene3D G3DSA:3.90.1150.10 285 416 5.5E-55 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 PIRSF PIRSF000412 1 418 8.3E-169 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 SUPERFAMILY SSF53383 6 416 1.87E-182 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.094 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 Gene3D G3DSA:3.40.640.10 37 284 3.9E-106 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 PANTHER PTHR11680 1 416 0.0 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 PAM18_RS13330 54c0c2c7a93fe82b3049be0f2d34ff49 418 PANTHER PTHR11680:SF9 1 416 0.0 T 26-04-2016 PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 Gene3D G3DSA:1.10.10.10 5 85 3.8E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 174 1.1E-33 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 172 3.2E-49 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 Gene3D G3DSA:1.10.10.10 87 163 8.0E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 SUPERFAMILY SSF46785 5 86 3.67E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 PANTHER PTHR34298 1 329 5.8E-127 T 26-04-2016 PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 SUPERFAMILY SSF46785 87 163 6.8E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS09095 ab7ede72dedd78d21c590ff6531cf58f 330 PANTHER PTHR34298:SF2 1 329 5.8E-127 T 26-04-2016 PAM18_RS07075 1e84cbd96f67cdcdf0539ae1554f1815 136 Pfam PF13652 Putative quorum-sensing-regulated virulence factor 20 131 1.0E-63 T 26-04-2016 IPR025203 Putative quorum-sensing-regulated virulence factor, QSregVF PAM18_RS23620 4f12dcc75b59e1c6990c246496cfe41c 229 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 4.1E-16 T 26-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 51 64 - T 26-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 112 127 - T 26-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 PANTHER PTHR32071:SF15 23 321 3.5E-109 T 26-04-2016 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 239 248 - T 26-04-2016 IPR025944 Sigma-54 interaction domain, conserved site PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 SUPERFAMILY SSF52540 28 267 1.78E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 Gene3D G3DSA:3.40.50.300 31 198 1.1E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 PANTHER PTHR32071 23 321 3.5E-109 T 26-04-2016 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 SMART SM00382 47 191 4.5E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 Pfam PF00158 Sigma-54 interaction domain 32 186 1.4E-47 T 26-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 PAM18_RS05120 9b1a2b2789eda6dc064c7d1a8c098dd0 324 Gene3D G3DSA:1.10.8.60 199 268 6.4E-22 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF63380 76 204 4.77E-23 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:2.40.30.10 106 198 2.9E-23 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF52343 204 333 3.67E-35 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 6.4E-25 T 26-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PANTHER PTHR19370 1 332 9.3E-68 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 4.4E-15 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PANTHER PTHR19370:SF128 1 332 9.3E-68 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Pfam PF00175 Oxidoreductase NAD-binding domain 212 314 2.4E-22 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF54292 1 98 1.97E-25 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 5.4E-8 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 236 245 5.4E-8 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 5.4E-8 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 230 5.4E-8 T 26-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.40.50.80 205 333 1.6E-36 T 26-04-2016 PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Pfam PF00970 Oxidoreductase FAD-binding domain 109 202 4.8E-17 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain PAM18_RS13005 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.10.20.30 4 99 1.2E-24 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Gene3D G3DSA:2.60.40.10 9 92 3.6E-27 T 26-04-2016 IPR013783 Immunoglobulin-like fold PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 PIRSF PIRSF006337 3 579 1.1E-225 T 26-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Pfam PF11941 Domain of unknown function (DUF3459) 487 576 1.5E-16 T 26-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 7 70 4.1E-7 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 SMART SM00642 114 495 7.8E-8 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 PANTHER PTHR10357:SF110 4 444 6.4E-130 T 26-04-2016 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 PANTHER PTHR10357:SF110 466 558 6.4E-130 T 26-04-2016 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 19 536 2.6E-196 T 26-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Gene3D G3DSA:3.20.20.80 106 424 3.0E-75 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Gene3D G3DSA:3.20.20.80 471 498 3.0E-75 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 SUPERFAMILY SSF81296 5 92 3.85E-22 T 26-04-2016 IPR014756 Immunoglobulin E-set PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 PANTHER PTHR10357 4 444 6.4E-130 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 PANTHER PTHR10357 466 558 6.4E-130 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 Pfam PF00128 Alpha amylase, catalytic domain 133 210 2.1E-8 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PAM18_RS14760 e63928390bd61217b6eecac99105044a 583 SUPERFAMILY SSF51445 89 498 2.62E-102 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS18630 8e9bfe47c4cf116f9a9f2ad2707de182 411 PIRSF PIRSF019466 2 407 8.7E-136 T 26-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PAM18_RS18630 8e9bfe47c4cf116f9a9f2ad2707de182 411 PANTHER PTHR40089 3 405 7.6E-188 T 26-04-2016 PAM18_RS18630 8e9bfe47c4cf116f9a9f2ad2707de182 411 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 384 1.6E-116 T 26-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 PAM18_RS20270 5baf72afb6e4d865afd17f72a3ce4db3 105 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 2.0E-31 T 26-04-2016 IPR018741 Protein of unknown function DUF2288 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 257 281 6.2E-7 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 294 313 6.2E-7 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 PRINTS PR00164 ABC-2 type transport system membrane protein signature 314 333 6.2E-7 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 PANTHER PTHR30294 4 372 1.2E-82 T 26-04-2016 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 Pfam PF12698 ABC-2 family transporter protein 32 364 1.2E-35 T 26-04-2016 PAM18_RS12310 460469bbf62238ebd10522e09b50e247 372 PANTHER PTHR30294:SF15 4 372 1.2E-82 T 26-04-2016 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:1.10.1390.10 506 551 1.9E-16 T 26-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 26-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.844 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Pfam PF00342 Phosphoglucose isomerase 55 545 5.5E-194 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 2.6E-51 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 SUPERFAMILY SSF53697 9 551 2.63E-208 T 26-04-2016 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 26-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 9 105 2.2E-151 T 26-04-2016 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 267 505 2.2E-151 T 26-04-2016 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 150 188 2.2E-151 T 26-04-2016 PAM18_RS24780 5daab83886895ecd19799ba58766423c 554 PANTHER PTHR11469 2 549 3.6E-283 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 SUPERFAMILY SSF103481 41 144 1.09E-8 T 26-04-2016 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 Pfam PF00892 EamA-like transporter family 150 282 1.5E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 Pfam PF00892 EamA-like transporter family 8 141 6.6E-18 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 PANTHER PTHR12715:SF8 1 295 8.2E-74 T 26-04-2016 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 SUPERFAMILY SSF103481 191 288 6.41E-12 T 26-04-2016 PAM18_RS07105 7216fd3cc77ea6617415e8ac2f50528d 297 PANTHER PTHR12715 1 295 8.2E-74 T 26-04-2016 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 SUPERFAMILY SSF103481 185 282 2.48E-13 T 26-04-2016 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 SUPERFAMILY SSF103481 39 134 3.92E-12 T 26-04-2016 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 PANTHER PTHR32322:SF9 5 295 1.5E-112 T 26-04-2016 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 PANTHER PTHR32322 5 295 1.5E-112 T 26-04-2016 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 Pfam PF00892 EamA-like transporter family 142 280 1.5E-13 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS25030 fe241c036f4eaecd5480ea465c13b08e 297 Pfam PF00892 EamA-like transporter family 6 130 1.6E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS10575 6e5a3dc2bfd3e0fd485aba2b146a827b 119 Pfam PF14346 Domain of unknown function (DUF4398) 13 112 9.3E-24 T 26-04-2016 IPR025511 Domain of unknown function DUF4398 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 26-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-42 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.0E-33 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 PANTHER PTHR13501 1 109 6.7E-50 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.9E-45 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.804 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03450 d9dac43286d48fa21d0b5cdb26095755 110 SUPERFAMILY SSF54843 1 109 6.8E-42 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PAM18_RS13045 30b1975ba1c90f1ec384f6aab1989fe9 96 SUPERFAMILY SSF54909 1 95 3.75E-35 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS13045 30b1975ba1c90f1ec384f6aab1989fe9 96 PIRSF PIRSF001486 1 94 1.7E-44 T 26-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS13045 30b1975ba1c90f1ec384f6aab1989fe9 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.0E-37 T 26-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS13045 30b1975ba1c90f1ec384f6aab1989fe9 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.4E-44 T 26-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS13045 30b1975ba1c90f1ec384f6aab1989fe9 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 4.0E-28 T 26-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 SUPERFAMILY SSF51735 2 309 3.64E-87 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 49 309 1.2E-61 T 26-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 Gene3D G3DSA:3.40.50.720 135 293 5.8E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 PANTHER PTHR13812 1 309 1.3E-98 T 26-04-2016 PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 PANTHER PTHR13812:SF19 1 309 1.3E-98 T 26-04-2016 PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 Gene3D G3DSA:3.30.1780.10 4 134 8.2E-40 T 26-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal PAM18_RS25685 f6236ce34ea940ee76336002b721d077 310 PIRSF PIRSF001439 4 310 2.3E-72 T 26-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 PANTHER PTHR32089 150 535 2.9E-113 T 26-04-2016 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 Gene3D G3DSA:1.10.287.950 287 505 3.6E-56 T 26-04-2016 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 SMART SM00283 273 534 1.0E-79 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 SUPERFAMILY SSF58104 226 535 3.92E-76 T 26-04-2016 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 SMART SM00304 206 258 1.1E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 Pfam PF00672 HAMP domain 187 255 7.3E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS12435 288c5dcbd5e3be3aa1f4c1e1531b80e5 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 533 1.0E-53 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS02645 23533777027161f3cdf0c251e1fe748f 146 Gene3D G3DSA:1.10.760.10 25 130 6.9E-15 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02645 23533777027161f3cdf0c251e1fe748f 146 Pfam PF00034 Cytochrome c 50 131 2.7E-9 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02645 23533777027161f3cdf0c251e1fe748f 146 SUPERFAMILY SSF46626 39 143 2.6E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SMART SM00278 585 604 0.59 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SMART SM00278 553 572 0.61 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Pfam PF01541 GIY-YIG catalytic domain 19 93 9.2E-10 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 PANTHER PTHR30562:SF1 9 605 3.3E-277 T 26-04-2016 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Pfam PF14520 Helix-hairpin-helix domain 554 603 1.4E-12 T 26-04-2016 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SMART SM00465 17 98 1.4E-22 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Gene3D G3DSA:1.10.150.20 552 606 1.1E-24 T 26-04-2016 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 604 29.748 T 26-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SUPERFAMILY SSF46600 190 243 3.27E-11 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 PANTHER PTHR30562 9 605 3.3E-277 T 26-04-2016 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 539 1.6E-51 T 26-04-2016 IPR001162 UvrC family homology region PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 586 2.4E-186 T 26-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Gene3D G3DSA:3.40.1440.10 17 97 1.1E-6 T 26-04-2016 IPR027299 GIY-YIG domain PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SUPERFAMILY SSF82771 16 100 1.83E-21 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Pfam PF02151 UvrB/uvrC motif 214 234 6.6E-6 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 Gene3D G3DSA:4.10.860.10 183 243 8.3E-18 T 26-04-2016 IPR001943 UVR domain GO:0005515 PAM18_RS12365 e7ca09d4c346cbfa9531effcbf956395 608 SUPERFAMILY SSF47781 518 606 3.15E-24 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 90 2.3E-7 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 PANTHER PTHR10909:SF145 10 330 1.2E-54 T 26-04-2016 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 PANTHER PTHR10909 10 330 1.2E-54 T 26-04-2016 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 203 341 6.3E-28 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 SUPERFAMILY SSF47203 205 349 2.9E-35 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 Gene3D G3DSA:1.20.140.10 203 343 2.6E-33 T 26-04-2016 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 SUPERFAMILY SSF56645 13 197 1.59E-14 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS20550 af2aea373e28194ed48f8ebbeac10c98 354 Gene3D G3DSA:1.10.540.10 43 97 4.9E-9 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 SUPERFAMILY SSF46689 256 301 4.21E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 SUPERFAMILY SSF46689 204 254 8.96E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 PANTHER PTHR11019:SF81 41 310 3.2E-107 T 26-04-2016 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 Pfam PF12833 Helix-turn-helix domain 226 300 1.1E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 PANTHER PTHR11019 41 310 3.2E-107 T 26-04-2016 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 SMART SM00342 220 303 6.5E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 Pfam PF06719 AraC-type transcriptional regulator N-terminus 41 191 7.2E-51 T 26-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 257 299 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 249 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 Gene3D G3DSA:1.10.10.60 258 299 9.0E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS15370 3bc7ed4c1056ced662c659d5701e5e1f 310 Gene3D G3DSA:1.10.10.60 200 257 1.6E-21 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 294 9.4E-36 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 PANTHER PTHR22981 1 295 1.5E-117 T 26-04-2016 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 4.5E-51 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 26-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 Gene3D G3DSA:1.10.1040.10 164 295 2.3E-43 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 PIRSF PIRSF000103 1 297 6.3E-79 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 295 7.2E-147 T 26-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 SUPERFAMILY SSF51735 2 163 1.79E-45 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 SUPERFAMILY SSF48179 163 296 3.97E-39 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS07295 272a29bbb184032ba14edb808f61e4d5 298 Gene3D G3DSA:3.40.50.720 2 163 8.9E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 PIRSF PIRSF026640 1 183 5.5E-62 T 26-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 Pfam PF01817 Chorismate mutase type II 31 101 2.9E-8 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 SUPERFAMILY SSF48600 30 182 3.58E-30 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 SMART SM00830 23 103 8.5E-14 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 Gene3D G3DSA:1.20.59.10 31 101 1.9E-11 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS27110 6129f851d9e42e9769c611948ad4cc1d 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 27 134 7.4E-38 T 26-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 PAM18_RS26280 d3a62f2472c051280b1320054ff671e3 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 46.24 T 26-04-2016 IPR003846 Uncharacterised protein family UPF0061 PAM18_RS26280 d3a62f2472c051280b1320054ff671e3 486 PANTHER PTHR32057 4 486 6.1E-206 T 26-04-2016 PAM18_RS26280 d3a62f2472c051280b1320054ff671e3 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 456 4.3E-152 T 26-04-2016 IPR003846 Uncharacterised protein family UPF0061 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.539 T 26-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 PANTHER PTHR36965:SF1 2 90 3.0E-53 T 26-04-2016 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.8E-41 T 26-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 SUPERFAMILY SSF111148 1 89 2.62E-41 T 26-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 PIRSF PIRSF029827 1 90 1.3E-40 T 26-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 74 2.0E-39 T 26-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 PANTHER PTHR36965 2 90 3.0E-53 T 26-04-2016 PAM18_RS26915 46575be49be3b252d5714d477aa7887d 90 Gene3D G3DSA:1.10.3880.10 1 89 1.9E-41 T 26-04-2016 PAM18_RS28780 061a84ba26354370d111ef6d5685f608 449 Pfam PF00324 Amino acid permease 32 407 2.8E-33 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS28780 061a84ba26354370d111ef6d5685f608 449 PIRSF PIRSF006060 1 449 1.1E-67 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS28780 061a84ba26354370d111ef6d5685f608 449 PANTHER PTHR11785 2 449 4.9E-235 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS28780 061a84ba26354370d111ef6d5685f608 449 PANTHER PTHR11785:SF197 2 449 4.9E-235 T 26-04-2016 PAM18_RS10145 5b28bf898c2d8e642810f8ba3ed2613f 414 PANTHER PTHR30489 1 414 3.8E-119 T 26-04-2016 PAM18_RS10145 5b28bf898c2d8e642810f8ba3ed2613f 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 414 3.5E-156 T 26-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PAM18_RS10145 5b28bf898c2d8e642810f8ba3ed2613f 414 Pfam PF12704 MacB-like periplasmic core domain 27 241 2.1E-18 T 26-04-2016 IPR025857 MacB-like periplasmic core domain PAM18_RS10145 5b28bf898c2d8e642810f8ba3ed2613f 414 PANTHER PTHR30489:SF8 1 414 3.8E-119 T 26-04-2016 PAM18_RS10145 5b28bf898c2d8e642810f8ba3ed2613f 414 Pfam PF02687 FtsX-like permease family 274 407 1.7E-20 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 PANTHER PTHR30290:SF14 28 533 1.9E-213 T 26-04-2016 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 Gene3D G3DSA:3.90.76.10 36 216 1.2E-45 T 26-04-2016 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 452 2.5E-97 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 SUPERFAMILY SSF53850 28 528 7.45E-146 T 26-04-2016 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 PANTHER PTHR30290 28 533 1.9E-213 T 26-04-2016 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 PIRSF PIRSF002741 19 529 5.8E-116 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS23450 bd704fcaee04e520a46c436aa0c0fb28 533 Gene3D G3DSA:3.10.105.10 291 502 6.0E-66 T 26-04-2016 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF04963 Sigma-54 factor, core binding domain 130 323 4.6E-63 T 26-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 5.3E-17 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 206 223 1.4E-32 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 412 423 1.4E-32 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 470 488 1.4E-32 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PRINTS PR00045 Sigma-54 factor signature 396 408 1.4E-32 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PANTHER PTHR32248:SF4 1 497 2.2E-180 T 26-04-2016 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 1.7E-159 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PANTHER PTHR32248 1 497 2.2E-180 T 26-04-2016 PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 Pfam PF04552 Sigma-54, DNA binding domain 337 495 5.0E-72 T 26-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding PAM18_RS23260 5bf60887ecf851fdf77990d038adc04f 497 PIRSF PIRSF000774 1 497 1.9E-157 T 26-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SUPERFAMILY SSF158472 177 229 1.31E-5 T 26-04-2016 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Gene3D G3DSA:3.30.565.10 279 444 1.4E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Gene3D G3DSA:1.10.287.130 224 278 3.0E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 4.0E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 4.0E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.0E-8 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PANTHER PTHR24423:SF477 171 444 4.1E-65 T 26-04-2016 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PANTHER PTHR24423:SF477 119 153 4.1E-65 T 26-04-2016 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 444 1.0E-14 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SMART SM00304 177 233 1.6E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SUPERFAMILY SSF47384 217 292 8.44E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Pfam PF00672 HAMP domain 159 229 3.3E-14 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SUPERFAMILY SSF55874 282 444 1.7E-30 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SMART SM00388 234 293 4.4E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PANTHER PTHR24423 171 444 4.1E-65 T 26-04-2016 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 PANTHER PTHR24423 119 153 4.1E-65 T 26-04-2016 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 2.6E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 SMART SM00387 338 446 1.1E-28 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS11745 4cce3bdefba0d9c1c44eb4b0c574d0e3 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 38 148 4.1E-37 T 26-04-2016 IPR031930 2-component histidine kinase, sensor domain PAM18_RS20025 2b282482eb5d1a0f0e7bb8c022081773 73 Gene3D G3DSA:1.10.720.30 12 69 6.4E-32 T 26-04-2016 IPR003034 SAP domain PAM18_RS20025 2b282482eb5d1a0f0e7bb8c022081773 73 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 66 7.0E-34 T 26-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 PANTHER PTHR24064:SF234 1 431 2.3E-222 T 26-04-2016 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 SUPERFAMILY SSF103473 1 442 2.75E-78 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 Gene3D G3DSA:1.20.1250.20 262 443 2.7E-22 T 26-04-2016 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 Gene3D G3DSA:1.20.1250.20 24 207 4.5E-35 T 26-04-2016 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 Pfam PF07690 Major Facilitator Superfamily 33 343 1.5E-40 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 PANTHER PTHR24064 1 431 2.3E-222 T 26-04-2016 PAM18_RS13220 aae953b0841f502ab8f026cd91e9319b 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS07040 6a98d5b0f7cab16c1bef8114052e2dee 168 Pfam PF02464 Competence-damaged protein 10 161 6.5E-55 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS07040 6a98d5b0f7cab16c1bef8114052e2dee 168 SUPERFAMILY SSF142433 4 161 3.4E-52 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS07040 6a98d5b0f7cab16c1bef8114052e2dee 168 Gene3D G3DSA:3.90.950.20 3 162 1.6E-54 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS07040 6a98d5b0f7cab16c1bef8114052e2dee 168 PANTHER PTHR13939 3 168 1.1E-68 T 26-04-2016 PAM18_RS07040 6a98d5b0f7cab16c1bef8114052e2dee 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 161 2.4E-43 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 SUPERFAMILY SSF52255 4 160 3.4E-67 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 SMART SM01001 3 154 3.4E-102 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 1.4E-67 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Gene3D G3DSA:3.40.50.7700 3 158 4.9E-75 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.922 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 PIRSF PIRSF001338 1 161 5.7E-66 T 26-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Pfam PF00731 AIR carboxylase 5 152 4.5E-64 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 PANTHER PTHR23046:SF2 1 162 8.6E-88 T 26-04-2016 PAM18_RS28350 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 PANTHER PTHR23046 1 162 8.6E-88 T 26-04-2016 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 8.5E-58 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 PIRSF PIRSF003078 5 214 1.0E-60 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 Gene3D G3DSA:3.40.50.150 11 212 3.6E-65 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 Pfam PF02527 rRNA small subunit methyltransferase G 28 207 1.3E-62 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 SUPERFAMILY SSF53335 13 212 3.28E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 PANTHER PTHR31760:SF0 1 212 3.5E-77 T 26-04-2016 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 209 27.9 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PAM18_RS29090 4e828824a2364c7d328db8e624fa7594 214 PANTHER PTHR31760 1 212 3.5E-77 T 26-04-2016 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.1E-45 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.518 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 SUPERFAMILY SSF64263 1 119 5.1E-50 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 Pfam PF01196 Ribosomal protein L17 20 116 2.3E-33 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 PANTHER PTHR14413 1 119 2.8E-63 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03555 ac0d1b6be9719a22e63bd4a16ba0b937 129 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-48 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS26615 e1703d84556384e803ed37f7ffe2640a 266 Gene3D G3DSA:3.40.630.40 4 263 1.5E-94 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS26615 e1703d84556384e803ed37f7ffe2640a 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 5.1E-123 T 26-04-2016 IPR010247 N-formylglutamate deformylase PAM18_RS26615 e1703d84556384e803ed37f7ffe2640a 266 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 2.6E-71 T 26-04-2016 IPR007709 N-formylglutamate amidohydrolase PAM18_RS26615 e1703d84556384e803ed37f7ffe2640a 266 SUPERFAMILY SSF53187 5 263 2.72E-82 T 26-04-2016 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 PIRSF PIRSF006102 3 213 1.7E-65 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 6.3E-60 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 PANTHER PTHR30586 2 215 1.5E-149 T 26-04-2016 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.7E-108 T 26-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.649 T 26-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PAM18_RS10090 13e95127b59357ab145b2e7087de4ef5 223 PANTHER PTHR30586:SF1 2 215 1.5E-149 T 26-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Gene3D G3DSA:3.40.50.980 19 131 1.3E-34 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Gene3D G3DSA:3.40.50.980 171 196 1.3E-34 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 PANTHER PTHR24095 19 540 2.7E-272 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Pfam PF00501 AMP-binding enzyme 25 443 2.7E-92 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Gene3D G3DSA:3.30.300.30 440 538 1.1E-31 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Gene3D G3DSA:2.30.38.10 369 436 2.7E-21 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 1.5E-21 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 SUPERFAMILY SSF56801 13 538 2.22E-142 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 PANTHER PTHR24095:SF169 19 540 2.7E-272 T 26-04-2016 PAM18_RS03780 9fbbb93a539feb91243cdc77d49385ba 540 Gene3D G3DSA:3.40.50.980 197 341 3.8E-31 T 26-04-2016 PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 46 478 4.0E-148 T 26-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 PANTHER PTHR30576 11 478 0.0 T 26-04-2016 PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 34 477 1.3E-136 T 26-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 Gene3D G3DSA:3.40.50.720 150 221 3.5E-7 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 Pfam PF13727 CoA-binding domain 70 248 1.0E-27 T 26-04-2016 PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 SUPERFAMILY SSF51735 151 267 3.46E-9 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 Pfam PF02397 Bacterial sugar transferase 284 472 1.2E-58 T 26-04-2016 IPR003362 Bacterial sugar transferase PAM18_RS14430 67fe750624e1b8a67202e4af369db816 478 PANTHER PTHR30576:SF9 11 478 0.0 T 26-04-2016 PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 SUPERFAMILY SSF52218 4 196 3.01E-64 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 5.2E-45 T 26-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 Gene3D G3DSA:3.40.50.360 3 196 1.0E-67 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 PANTHER PTHR30546 4 196 2.6E-77 T 26-04-2016 PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 26-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 3 198 32.831 T 26-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 PAM18_RS20875 092226fc64ef7a8cca956cdc3c0b9d4a 198 Pfam PF03358 NADPH-dependent FMN reductase 13 141 2.2E-8 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 PANTHER PTHR30485 5 204 1.2E-73 T 26-04-2016 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 8 31 3.4E-5 T 26-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 159 181 3.4E-5 T 26-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 SUPERFAMILY SSF81342 5 197 4.55E-33 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 PANTHER PTHR30485:SF1 5 204 1.2E-73 T 26-04-2016 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 Pfam PF01292 Prokaryotic cytochrome b561 6 190 2.5E-22 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS25560 e8a5ff00f66a84440d4cb3b735be3068 204 Gene3D G3DSA:1.20.950.20 5 197 4.1E-44 T 26-04-2016 PAM18_RS27485 daf5c06961bc2a6425dfc574bd722544 376 PANTHER PTHR38043 2 372 2.0E-99 T 26-04-2016 PAM18_RS27485 daf5c06961bc2a6425dfc574bd722544 376 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 31 358 1.4E-96 T 26-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PAM18_RS03090 1181430245fa3999941039a8f3e6a9d6 104 Pfam PF11112 Pyocin activator protein PrtN 16 89 5.3E-29 T 26-04-2016 IPR020518 Transcription regulator PrtN GO:0006355 PAM18_RS03090 1181430245fa3999941039a8f3e6a9d6 104 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 12 83 1.0E-37 T 26-04-2016 IPR020518 Transcription regulator PrtN GO:0006355 PAM18_RS04315 32d80d5519d61e4254d287117cee6792 123 Pfam PF03061 Thioesterase superfamily 32 106 1.4E-11 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS04315 32d80d5519d61e4254d287117cee6792 123 Gene3D G3DSA:3.10.129.10 32 119 3.4E-29 T 26-04-2016 IPR029069 HotDog domain PAM18_RS04315 32d80d5519d61e4254d287117cee6792 123 PANTHER PTHR12418:SF30 32 118 1.9E-36 T 26-04-2016 PAM18_RS04315 32d80d5519d61e4254d287117cee6792 123 PANTHER PTHR12418 32 118 1.9E-36 T 26-04-2016 PAM18_RS04315 32d80d5519d61e4254d287117cee6792 123 SUPERFAMILY SSF54637 32 121 8.34E-17 T 26-04-2016 IPR029069 HotDog domain PAM18_RS13680 8fabd194584810ebd44487d44b8f21b7 80 Pfam PF07867 Protein of unknown function (DUF1654) 12 78 6.7E-30 T 26-04-2016 IPR012449 Bacteriophage F116, Orf28 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 PANTHER PTHR13847 1 415 0.0 T 26-04-2016 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 SUPERFAMILY SSF51905 346 399 7.12E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 SUPERFAMILY SSF51905 29 254 7.12E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 Pfam PF01266 FAD dependent oxidoreductase 30 384 3.4E-37 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 Gene3D G3DSA:3.50.50.60 174 253 1.3E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 Gene3D G3DSA:3.50.50.60 20 120 1.3E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 Gene3D G3DSA:3.50.50.60 346 399 1.3E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 6.5E-6 T 26-04-2016 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 30 52 6.5E-6 T 26-04-2016 PAM18_RS14000 43e58dd9ab497a864334d0424d126854 432 PANTHER PTHR13847:SF194 1 415 0.0 T 26-04-2016 PAM18_RS00075 89339f4fffb8c7f2c47a77b231e5bacf 104 SUPERFAMILY SSF48452 4 82 4.55E-12 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS00075 89339f4fffb8c7f2c47a77b231e5bacf 104 Gene3D G3DSA:1.25.40.10 5 83 5.9E-13 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS00075 89339f4fffb8c7f2c47a77b231e5bacf 104 SMART SM00028 16 49 0.25 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS00075 89339f4fffb8c7f2c47a77b231e5bacf 104 SMART SM00028 50 83 23.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS00075 89339f4fffb8c7f2c47a77b231e5bacf 104 Pfam PF13432 Tetratricopeptide repeat 21 81 5.5E-7 T 26-04-2016 PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 Gene3D G3DSA:3.40.1190.20 3 309 1.7E-87 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 PANTHER PTHR10584:SF186 1 310 3.3E-139 T 26-04-2016 PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 Pfam PF00294 pfkB family carbohydrate kinase 5 303 1.6E-58 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 SUPERFAMILY SSF53613 2 309 8.57E-80 T 26-04-2016 IPR029056 Ribokinase-like PAM18_RS14280 f92c58769995232f7d6265ea2c98727a 316 PANTHER PTHR10584 1 310 3.3E-139 T 26-04-2016 PAM18_RS07405 185e1a98eab8ef662ae37f105eb1e1b2 520 PANTHER PTHR13285 1 433 4.2E-114 T 26-04-2016 PAM18_RS07405 185e1a98eab8ef662ae37f105eb1e1b2 520 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 148 355 8.2E-27 T 26-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT PAM18_RS07405 185e1a98eab8ef662ae37f105eb1e1b2 520 PIRSF PIRSF016636 474 520 0.069 T 26-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB PAM18_RS07405 185e1a98eab8ef662ae37f105eb1e1b2 520 PIRSF PIRSF500217 1 520 5.0E-164 T 26-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PAM18_RS07405 185e1a98eab8ef662ae37f105eb1e1b2 520 PANTHER PTHR13285:SF23 1 433 4.2E-114 T 26-04-2016 PAM18_RS06170 cae1d32be796d678ce673ff07c196b6c 1746 Pfam PF12458 ATPase involved in DNA repair 38 485 1.1E-200 T 26-04-2016 IPR020958 DUF3686 PAM18_RS06170 cae1d32be796d678ce673ff07c196b6c 1746 Pfam PF07728 AAA domain (dynein-related subfamily) 1292 1415 5.5E-5 T 26-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PAM18_RS06170 cae1d32be796d678ce673ff07c196b6c 1746 Gene3D G3DSA:3.40.50.300 1281 1431 4.1E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06170 cae1d32be796d678ce673ff07c196b6c 1746 SUPERFAMILY SSF52540 1280 1437 4.97E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PANTHER PTHR10992 27 277 2.9E-99 T 26-04-2016 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PANTHER PTHR10992 294 331 2.9E-99 T 26-04-2016 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 SUPERFAMILY SSF53474 45 329 4.82E-62 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PANTHER PTHR10992:SF771 27 277 2.9E-99 T 26-04-2016 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PANTHER PTHR10992:SF771 294 331 2.9E-99 T 26-04-2016 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 1.5E-11 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 1.5E-11 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.5E-11 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 Gene3D G3DSA:3.40.50.1820 29 330 3.6E-81 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 Pfam PF00561 alpha/beta hydrolase fold 66 317 1.2E-23 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00412 Epoxide hydrolase signature 136 149 1.8E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00412 Epoxide hydrolase signature 91 106 1.8E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00412 Epoxide hydrolase signature 306 328 1.8E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00412 Epoxide hydrolase signature 150 163 1.8E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS09800 4629214189f83265e21713ca168ed59a 333 PRINTS PR00412 Epoxide hydrolase signature 71 89 1.8E-6 T 26-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 PAM18_RS19600 89a7138f57e2e95d2fadde84a2bc5633 193 Gene3D G3DSA:3.90.1720.10 52 182 6.7E-45 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS19600 89a7138f57e2e95d2fadde84a2bc5633 193 Pfam PF00877 NlpC/P60 family 70 178 7.8E-30 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS19600 89a7138f57e2e95d2fadde84a2bc5633 193 SUPERFAMILY SSF54001 54 181 1.77E-39 T 26-04-2016 PAM18_RS19600 89a7138f57e2e95d2fadde84a2bc5633 193 PANTHER PTHR21666 28 181 3.1E-40 T 26-04-2016 PAM18_RS08290 3e807a411ff22d6883e4a5081a1ddbef 156 SUPERFAMILY SSF140566 6 130 3.01E-29 T 26-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PAM18_RS08290 3e807a411ff22d6883e4a5081a1ddbef 156 Gene3D G3DSA:1.20.58.300 4 130 6.7E-36 T 26-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PAM18_RS08290 3e807a411ff22d6883e4a5081a1ddbef 156 Pfam PF05130 FlgN protein 2 145 3.6E-31 T 26-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 Pfam PF01553 Acyltransferase 31 146 5.1E-10 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 SMART SM00563 38 150 8.8E-20 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 PANTHER PTHR10434:SF9 1 181 5.8E-93 T 26-04-2016 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 PANTHER PTHR10434 1 181 5.8E-93 T 26-04-2016 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 Gene3D G3DSA:3.40.1130.10 27 147 1.4E-5 T 26-04-2016 PAM18_RS01805 c039ace661b86d5fddb71443a305b1e3 192 SUPERFAMILY SSF69593 23 164 3.01E-21 T 26-04-2016 PAM18_RS26015 f7070e7e1e532ee3d57cf74bec803409 248 Gene3D G3DSA:3.30.565.40 42 153 3.2E-12 T 26-04-2016 IPR025303 Domain of unknown function DUF4163 PAM18_RS26015 f7070e7e1e532ee3d57cf74bec803409 248 Gene3D G3DSA:3.90.640.20 157 243 4.8E-10 T 26-04-2016 IPR021729 Domain of unknown function DUF3298 PAM18_RS26015 f7070e7e1e532ee3d57cf74bec803409 248 Pfam PF11738 Protein of unknown function (DUF3298) 159 232 4.8E-6 T 26-04-2016 IPR021729 Domain of unknown function DUF3298 PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 Gene3D G3DSA:1.10.530.10 247 356 6.0E-55 T 26-04-2016 PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 Gene3D G3DSA:1.10.530.10 113 166 6.0E-55 T 26-04-2016 PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 PANTHER PTHR30163:SF0 1 359 5.0E-214 T 26-04-2016 PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 Pfam PF13406 Transglycosylase SLT domain 59 352 2.4E-92 T 26-04-2016 IPR031304 Transglycosylase SLT domain 2 PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 PANTHER PTHR30163 1 359 5.0E-214 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 63 355 2.8E-116 T 26-04-2016 IPR011757 Lytic transglycosylase MltB PAM18_RS23170 8659debd63383e12c87d2b0447a73125 367 SUPERFAMILY SSF53955 50 354 5.91E-96 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PANTHER PTHR24423 69 107 6.6E-125 T 26-04-2016 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PANTHER PTHR24423 180 471 6.6E-125 T 26-04-2016 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 SUPERFAMILY SSF47384 222 303 1.2E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 Gene3D G3DSA:1.10.287.130 230 290 7.8E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 SMART SM00387 348 459 1.2E-32 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 7.8E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 7.8E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 7.8E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 7.8E-12 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PANTHER PTHR24423:SF474 69 107 6.6E-125 T 26-04-2016 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 PANTHER PTHR24423:SF474 180 471 6.6E-125 T 26-04-2016 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 458 1.7E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 4.3E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 SMART SM00388 239 304 2.6E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 Gene3D G3DSA:3.30.565.10 291 461 8.2E-40 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS25015 652d2162c406ff52b6f06736b1c42970 477 SUPERFAMILY SSF55874 293 461 1.15E-37 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 Gene3D G3DSA:3.30.1130.10 55 183 1.9E-64 T 26-04-2016 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 110 120 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 Pfam PF01227 GTP cyclohydrolase I 6 182 7.3E-76 T 26-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 Gene3D G3DSA:1.10.286.10 4 52 1.9E-22 T 26-04-2016 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 PANTHER PTHR11109 3 184 5.8E-118 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 SUPERFAMILY SSF55620 5 183 8.89E-79 T 26-04-2016 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 39.246 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS07855 bfdc28d6d607697c291964653a79df4a 186 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 1.4E-77 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 SUPERFAMILY SSF54534 30 228 1.79E-56 T 26-04-2016 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:3.10.50.40 111 234 6.9E-51 T 26-04-2016 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 PANTHER PTHR10516 109 230 3.2E-58 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS08760 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:1.10.287.460 24 110 5.9E-28 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 PANTHER PTHR10516:SF320 109 230 3.2E-58 T 26-04-2016 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 130 2.0E-31 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS08760 683c747fa89c692545648b408245bde4 253 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 9.4E-26 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 SUPERFAMILY SSF53383 28 445 4.0E-115 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.40.640.10 71 347 4.8E-77 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 Pfam PF00202 Aminotransferase class-III 26 444 1.4E-118 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.90.1150.10 350 445 1.5E-34 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.90.1150.10 14 69 1.5E-34 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 PANTHER PTHR11986 20 445 1.9E-292 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS00670 86d10632911fdfe0673bb43526fff6e0 448 PANTHER PTHR11986:SF72 20 445 1.9E-292 T 26-04-2016 PAM18_RS28835 1292e5f1a8705c93ecd8bcb4506f4b6e 247 Gene3D G3DSA:1.25.40.10 33 103 4.1E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS28835 1292e5f1a8705c93ecd8bcb4506f4b6e 247 SUPERFAMILY SSF48452 32 106 1.46E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 77 2.0E-9 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 344 2.0E-9 T 26-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 SUPERFAMILY SSF111369 45 104 6.67E-7 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 Gene3D G3DSA:2.40.50.100 47 79 4.1E-16 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 Gene3D G3DSA:2.40.50.100 210 243 4.1E-16 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 286 1.1E-18 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 SUPERFAMILY SSF111369 117 178 1.96E-5 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 PANTHER PTHR30386:SF7 1 344 4.3E-141 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 PANTHER PTHR30386 1 344 4.3E-141 T 26-04-2016 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 Pfam PF00529 HlyD membrane-fusion protein of T1SS 20 339 1.3E-8 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS09365 499b2481993037c39abc2c1fadd91f44 344 SUPERFAMILY SSF111369 188 284 1.15E-11 T 26-04-2016 PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 Gene3D G3DSA:3.40.50.300 3 223 1.4E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 SMART SM00382 30 226 2.4E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 PANTHER PTHR24220 6 224 2.2E-88 T 26-04-2016 PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 PANTHER PTHR24220:SF578 6 224 2.2E-88 T 26-04-2016 PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 Pfam PF00005 ABC transporter 24 178 2.4E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS04465 2d796d62d0cc59b181a3dc64464f35ab 234 SUPERFAMILY SSF52540 4 223 2.77E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 SMART SM00342 214 296 2.6E-30 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 292 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 PANTHER PTHR11019:SF61 29 296 9.6E-80 T 26-04-2016 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 Gene3D G3DSA:1.10.10.60 197 251 5.2E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 Pfam PF12833 Helix-turn-helix domain 220 296 1.1E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 SUPERFAMILY SSF46689 198 248 5.29E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 PANTHER PTHR11019 29 296 9.6E-80 T 26-04-2016 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 SUPERFAMILY SSF46689 250 296 3.05E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03635 c28af269655c9cc260abb5c342803b73 296 Gene3D G3DSA:1.10.10.60 252 296 1.6E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 PANTHER PTHR11748 18 355 4.0E-114 T 26-04-2016 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 Gene3D G3DSA:1.10.45.10 331 355 6.8E-8 T 26-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 SUPERFAMILY SSF56176 19 181 1.64E-27 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 Pfam PF01565 FAD binding domain 14 143 7.5E-19 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 Gene3D G3DSA:3.30.465.10 60 181 1.4E-20 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 PANTHER PTHR11748:SF1 18 355 4.0E-114 T 26-04-2016 PAM18_RS27965 413242d87e1e4e5c7b2d59a91391ea12 359 SUPERFAMILY SSF55103 140 355 9.29E-20 T 26-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PAM18_RS16505 7d6bf02f6c9bcb4b28d9fda9e1089d72 562 SUPERFAMILY SSF47226 8 125 1.0E-6 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS16505 7d6bf02f6c9bcb4b28d9fda9e1089d72 562 Gene3D G3DSA:1.20.120.160 13 134 2.4E-4 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS23485 b369683b9b791f2ab56d9789bf1142ed 210 Pfam PF01810 LysE type translocator 12 206 1.5E-36 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS23485 b369683b9b791f2ab56d9789bf1142ed 210 PANTHER PTHR30086 1 206 5.0E-97 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS23485 b369683b9b791f2ab56d9789bf1142ed 210 PIRSF PIRSF006324 2 209 3.4E-55 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS23485 b369683b9b791f2ab56d9789bf1142ed 210 PANTHER PTHR30086:SF7 1 206 5.0E-97 T 26-04-2016 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 Pfam PF00171 Aldehyde dehydrogenase family 37 454 2.1E-47 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 Gene3D G3DSA:3.40.309.10 266 453 2.3E-56 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 PANTHER PTHR11699:SF10 4 518 1.8E-193 T 26-04-2016 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 Gene3D G3DSA:3.40.605.10 8 264 1.4E-44 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 SUPERFAMILY SSF53720 24 516 1.31E-98 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 PAM18_RS19320 abff56f6d4d54546f255809fe9517f84 526 PANTHER PTHR11699 4 518 1.8E-193 T 26-04-2016 PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 Gene3D G3DSA:3.60.15.10 11 212 8.9E-49 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 PANTHER PTHR11935 7 212 2.4E-60 T 26-04-2016 PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 SMART SM00849 18 195 3.6E-34 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 PANTHER PTHR11935:SF8 7 212 2.4E-60 T 26-04-2016 PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 Pfam PF00753 Metallo-beta-lactamase superfamily 15 195 9.9E-30 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21490 d7e5376c991652b143860ba5d20f75db 213 SUPERFAMILY SSF56281 8 212 9.8E-52 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 125 186 1.7E-8 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 6.0E-10 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 5.3E-30 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 SUPERFAMILY SSF56784 3 215 5.65E-58 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 PANTHER PTHR18901 1 223 1.8E-111 T 26-04-2016 PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 Gene3D G3DSA:3.40.50.1000 74 216 1.7E-42 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 PANTHER PTHR18901:SF40 1 223 1.8E-111 T 26-04-2016 PAM18_RS10205 1d7feb58ddfb637fabcc10695e2fce83 230 Gene3D G3DSA:1.10.150.240 22 73 2.7E-10 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS12045 f1bddc7c7f65200936e6fdcb880eb1dc 389 Pfam PF08007 Cupin superfamily protein 16 319 4.8E-106 T 26-04-2016 IPR003347 JmjC domain PAM18_RS12045 f1bddc7c7f65200936e6fdcb880eb1dc 389 PANTHER PTHR13096 9 373 2.4E-74 T 26-04-2016 PAM18_RS12045 f1bddc7c7f65200936e6fdcb880eb1dc 389 SMART SM00558 101 225 6.1E-5 T 26-04-2016 IPR003347 JmjC domain PAM18_RS12045 f1bddc7c7f65200936e6fdcb880eb1dc 389 SUPERFAMILY SSF51197 6 300 2.88E-78 T 26-04-2016 PAM18_RS12045 f1bddc7c7f65200936e6fdcb880eb1dc 389 Gene3D G3DSA:2.60.120.650 7 215 9.3E-44 T 26-04-2016 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 4.4E-107 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 PANTHER PTHR20852:SF7 15 458 1.2E-148 T 26-04-2016 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 26-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.30.590.10 124 443 7.4E-92 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 SMART SM01230 120 376 1.2E-93 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 PANTHER PTHR20852 15 458 1.2E-148 T 26-04-2016 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.10.20.70 17 123 3.7E-18 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF54368 17 119 3.14E-17 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PAM18_RS15405 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF55931 122 456 1.18E-99 T 26-04-2016 PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 SUPERFAMILY SSF51261 159 271 5.75E-30 T 26-04-2016 IPR011055 Duplicated hybrid motif PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 PANTHER PTHR21666 48 298 2.3E-84 T 26-04-2016 PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 Gene3D G3DSA:2.70.70.10 147 271 2.4E-31 T 26-04-2016 PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 PANTHER PTHR21666:SF204 48 298 2.3E-84 T 26-04-2016 PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF13511 Domain of unknown function (DUF4124) 11 44 1.0E-10 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS28010 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF01551 Peptidase family M23 177 271 2.5E-24 T 26-04-2016 IPR016047 Peptidase M23 PAM18_RS26580 200f0a4e9ccfc69585945cfec8052f5a 116 PANTHER PTHR11803 13 116 2.0E-32 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS26580 200f0a4e9ccfc69585945cfec8052f5a 116 SUPERFAMILY SSF55298 4 115 6.6E-31 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS26580 200f0a4e9ccfc69585945cfec8052f5a 116 Pfam PF01042 Endoribonuclease L-PSP 5 114 1.8E-25 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS26580 200f0a4e9ccfc69585945cfec8052f5a 116 Gene3D G3DSA:3.30.1330.40 5 115 2.8E-29 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS11655 bb84c6b9683a5c797ef8ecb01fe7af4a 393 Pfam PF05762 VWA domain containing CoxE-like protein 187 272 2.3E-9 T 26-04-2016 IPR008912 Uncharacterised protein family CoxE-like PAM18_RS26060 d13bb54fda3c29a927e86ad2f35f5818 470 PANTHER PTHR11785 3 459 6.2E-270 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS26060 d13bb54fda3c29a927e86ad2f35f5818 470 Pfam PF00324 Amino acid permease 18 452 2.0E-116 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS26060 d13bb54fda3c29a927e86ad2f35f5818 470 PANTHER PTHR11785:SF399 3 459 6.2E-270 T 26-04-2016 PAM18_RS26060 d13bb54fda3c29a927e86ad2f35f5818 470 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS26060 d13bb54fda3c29a927e86ad2f35f5818 470 PIRSF PIRSF006060 1 466 7.4E-71 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS07145 8e7deb5b457c29c19f461160089a0e3f 440 Pfam PF00324 Amino acid permease 13 361 2.8E-38 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS07145 8e7deb5b457c29c19f461160089a0e3f 440 PANTHER PTHR11785:SF346 3 440 5.6E-285 T 26-04-2016 PAM18_RS07145 8e7deb5b457c29c19f461160089a0e3f 440 PIRSF PIRSF006060 1 435 6.6E-69 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS07145 8e7deb5b457c29c19f461160089a0e3f 440 PANTHER PTHR11785 3 440 5.6E-285 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 23.242 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 PANTHER PTHR33515 1 130 6.8E-48 T 26-04-2016 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 SUPERFAMILY SSF89919 2 106 1.96E-35 T 26-04-2016 IPR023799 Ribosome-binding factor A domain PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 26-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 1.0E-47 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 Pfam PF02033 Ribosome-binding factor A 7 112 7.4E-32 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.7E-34 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 PAM18_RS24835 2ef43db2e362b766dd90fd21275fe6bd 130 Gene3D G3DSA:3.30.300.20 4 119 3.1E-40 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 246 2.5E-93 T 26-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 PANTHER PTHR21485 5 252 2.2E-116 T 26-04-2016 PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 SUPERFAMILY SSF53448 5 251 1.6E-60 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 253 43.994 T 26-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 Gene3D G3DSA:3.90.550.10 5 252 1.7E-79 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 PANTHER PTHR21485:SF4 5 252 2.2E-116 T 26-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS10180 b3ccbc568c222a5fd3217677bab343ac 254 Pfam PF02348 Cytidylyltransferase 7 226 9.3E-56 T 26-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 PAM18_RS14910 2eebbeef8b4c623c93a9e30248787b99 149 Gene3D G3DSA:3.30.240.20 76 146 2.9E-16 T 26-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain PAM18_RS14910 2eebbeef8b4c623c93a9e30248787b99 149 PANTHER PTHR34582 4 145 9.0E-25 T 26-04-2016 PAM18_RS14910 2eebbeef8b4c623c93a9e30248787b99 149 PANTHER PTHR34582:SF6 4 145 9.0E-25 T 26-04-2016 PAM18_RS14910 2eebbeef8b4c623c93a9e30248787b99 149 Pfam PF04239 Protein of unknown function (DUF421) 85 146 2.6E-10 T 26-04-2016 IPR007353 Protein of unknown function DUF421 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 SUPERFAMILY SSF51905 348 411 3.15E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 SUPERFAMILY SSF51905 107 261 3.15E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 SUPERFAMILY SSF51905 4 57 3.15E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 SUPERFAMILY SSF54373 261 348 1.11E-16 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 PANTHER PTHR13847 1 55 6.5E-76 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 PANTHER PTHR13847 95 409 6.5E-76 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 PANTHER PTHR13847:SF180 1 55 6.5E-76 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 PANTHER PTHR13847:SF180 95 409 6.5E-76 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.50.50.60 96 118 9.7E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.50.50.60 177 249 9.7E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.50.50.60 348 407 9.7E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.50.50.60 1 60 9.7E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.30.9.10 250 346 1.1E-14 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Gene3D G3DSA:3.30.9.10 145 156 1.1E-14 T 26-04-2016 PAM18_RS14585 ca8ee995429651151f986db4382abe64 417 Pfam PF01266 FAD dependent oxidoreductase 6 384 6.4E-64 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF51182 32 186 9.78E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:1.10.10.60 226 258 7.2E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 Pfam PF12833 Helix-turn-helix domain 183 260 1.8E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:2.60.120.10 33 94 2.0E-7 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 SMART SM00342 177 259 4.6E-18 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 PANTHER PTHR11019:SF66 1 267 3.5E-169 T 26-04-2016 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 PANTHER PTHR11019 1 267 3.5E-169 T 26-04-2016 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF46689 216 261 1.57E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS19445 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:1.10.10.60 158 214 8.8E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 SUPERFAMILY SSF54427 1 163 6.13E-51 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 Gene3D G3DSA:3.10.450.50 2 156 3.6E-48 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 Pfam PF00866 Ring hydroxylating beta subunit 15 155 7.5E-48 T 26-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 7.1E-95 T 26-04-2016 IPR017640 Anthranilate 1,2-dioxygenase, small subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079|UniPathway: UPA01016 PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 PANTHER PTHR41534:SF1 1 163 1.6E-101 T 26-04-2016 PAM18_RS13020 b06df9ff89e725a8e17ba1cd3da1d7ea 163 PANTHER PTHR41534 1 163 1.6E-101 T 26-04-2016 PAM18_RS05170 3748ca3e1a7eb42f10777e4c630a0221 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 5.2E-159 T 26-04-2016 IPR010752 Protein of unknown function DUF1329 PAM18_RS05170 3748ca3e1a7eb42f10777e4c630a0221 455 Gene3D G3DSA:2.50.20.10 161 309 4.5E-39 T 26-04-2016 PAM18_RS05170 3748ca3e1a7eb42f10777e4c630a0221 455 Gene3D G3DSA:2.50.20.10 342 450 4.5E-39 T 26-04-2016 PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 Gene3D G3DSA:3.40.50.300 7 225 2.7E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 SMART SM00382 42 223 2.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 PANTHER PTHR24220 15 246 1.8E-87 T 26-04-2016 PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 Pfam PF00005 ABC transporter 34 172 1.7E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 SUPERFAMILY SSF52540 14 253 1.04E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00930 150b9b3c9f6ed7433cc1203a63ed3ec7 279 PANTHER PTHR24220:SF589 15 246 1.8E-87 T 26-04-2016 PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 Gene3D G3DSA:3.30.750.24 443 550 1.3E-15 T 26-04-2016 IPR002645 STAS domain PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 TIGRFAM TIGR00815 sulP: sulfate permease 8 547 1.7E-126 T 26-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 Pfam PF01740 STAS domain 439 546 4.7E-18 T 26-04-2016 IPR002645 STAS domain PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 SUPERFAMILY SSF52091 441 552 1.29E-15 T 26-04-2016 IPR002645 STAS domain PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 PANTHER PTHR11814 3 560 1.1E-170 T 26-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 PAM18_RS17425 7dfab8bb22141b839f266187ff8d7856 573 Pfam PF00916 Sulfate permease family 21 388 3.0E-93 T 26-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 PAM18_RS25460 7cc3edcabf4c845007702c4922ebaaa5 150 Pfam PF00583 Acetyltransferase (GNAT) family 54 129 1.2E-13 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS25460 7cc3edcabf4c845007702c4922ebaaa5 150 Gene3D G3DSA:3.40.630.30 1 149 1.7E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS25460 7cc3edcabf4c845007702c4922ebaaa5 150 SUPERFAMILY SSF55729 1 149 8.61E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS25460 7cc3edcabf4c845007702c4922ebaaa5 150 PANTHER PTHR13538:SF4 9 150 5.5E-29 T 26-04-2016 PAM18_RS25460 7cc3edcabf4c845007702c4922ebaaa5 150 PANTHER PTHR13538 9 150 5.5E-29 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 249 420 6.28E-67 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 9 199 6.28E-67 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 455 485 6.28E-67 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PANTHER PTHR23501:SF73 11 492 1.3E-166 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Pfam PF07690 Major Facilitator Superfamily 18 410 3.7E-55 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Gene3D G3DSA:1.20.1250.20 269 485 1.8E-11 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Gene3D G3DSA:1.20.1250.20 15 186 1.0E-36 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.4E-12 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.4E-12 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.4E-12 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.4E-12 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.4E-12 T 26-04-2016 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 419 2.1E-75 T 26-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PAM18_RS01220 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PANTHER PTHR23501 11 492 1.3E-166 T 26-04-2016 PAM18_RS25110 237f57c3b34e10529ac058b9980fe45e 125 Gene3D G3DSA:3.40.1260.10 8 124 2.1E-15 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS25110 237f57c3b34e10529ac058b9980fe45e 125 Pfam PF02635 DsrE/DsrF-like family 9 124 1.6E-15 T 26-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein PAM18_RS25110 237f57c3b34e10529ac058b9980fe45e 125 SUPERFAMILY SSF75169 10 125 5.38E-16 T 26-04-2016 IPR027396 DsrEFH-like PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 Pfam PF11940 Domain of unknown function (DUF3458) 465 841 6.8E-142 T 26-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 2.4E-10 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 2.4E-10 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 2.4E-10 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 2.4E-10 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 2.4E-10 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 Gene3D G3DSA:1.10.390.10 314 457 9.5E-32 T 26-04-2016 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 884 0.0 T 26-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 SUPERFAMILY SSF55486 209 457 2.01E-78 T 26-04-2016 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 Pfam PF01433 Peptidase family M1 114 390 1.6E-70 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PANTHER PTHR11533:SF152 619 884 0.0 T 26-04-2016 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PANTHER PTHR11533:SF152 2 595 0.0 T 26-04-2016 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 Gene3D G3DSA:1.25.50.10 556 885 4.0E-130 T 26-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PANTHER PTHR11533 619 884 0.0 T 26-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 PANTHER PTHR11533 2 595 0.0 T 26-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 PAM18_RS09665 3cc9f42184b052f68063117b6da8edfa 885 SUPERFAMILY SSF63737 4 199 2.22E-42 T 26-04-2016 PAM18_RS28640 dc345c349d02eaa2f601eac17913cd50 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 9.1E-17 T 26-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PAM18_RS28640 dc345c349d02eaa2f601eac17913cd50 53 PIRSF PIRSF036466 1 53 7.6E-24 T 26-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PAM18_RS28640 dc345c349d02eaa2f601eac17913cd50 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 21.504 T 26-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 PAM18_RS10795 d408eac6325793b87a97f648d2eccf52 833 PANTHER PTHR30287 8 833 5.0E-160 T 26-04-2016 PAM18_RS10795 d408eac6325793b87a97f648d2eccf52 833 Pfam PF02687 FtsX-like permease family 714 826 3.3E-8 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS16845 77b3a80ecdcce5daf4ac17377993b26c 253 Pfam PF03412 Peptidase C39 family 57 192 2.5E-20 T 26-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 PAM18_RS16845 77b3a80ecdcce5daf4ac17377993b26c 253 Gene3D G3DSA:3.90.70.10 69 192 4.3E-6 T 26-04-2016 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.7E-20 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 124 133 2.7E-20 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.7E-20 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 PIRSF PIRSF000303 1 161 3.4E-64 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 26-04-2016 IPR029760 Glutathione peroxidase conserved site PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 26-04-2016 IPR029759 Glutathione peroxidase active site PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 SUPERFAMILY SSF52833 5 160 2.05E-60 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 PANTHER PTHR11592 12 161 3.3E-82 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 Gene3D G3DSA:3.40.30.10 5 160 9.4E-70 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS10960 6418c0f43374c5dd3d8c5df23126d87f 161 Pfam PF00255 Glutathione peroxidase 9 112 1.8E-39 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 PAM18_RS18165 dddc1ec4d5cccbe5934e178974291a65 368 SUPERFAMILY SSF110296 2 353 9.02E-59 T 26-04-2016 PAM18_RS18165 dddc1ec4d5cccbe5934e178974291a65 368 Gene3D G3DSA:2.130.10.10 3 366 9.7E-74 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS18625 11595ad5073fd56ad6789e7f121075b0 118 Gene3D G3DSA:3.40.50.10400 1 118 3.5E-54 T 26-04-2016 IPR027269 Hypothetical PA1492 domain PAM18_RS18625 11595ad5073fd56ad6789e7f121075b0 118 Pfam PF09152 Domain of unknown function (DUF1937) 2 112 3.0E-49 T 26-04-2016 IPR015235 Domain of unknown function DUF1937 PAM18_RS18625 11595ad5073fd56ad6789e7f121075b0 118 SUPERFAMILY SSF52309 1 117 3.11E-42 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 33.287 T 26-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Pfam PF13393 Histidyl-tRNA synthetase 10 313 6.6E-45 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 SUPERFAMILY SSF55681 6 323 6.7E-102 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 SUPERFAMILY SSF52954 330 425 5.73E-23 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Gene3D G3DSA:3.40.50.800 330 424 6.3E-30 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 PANTHER PTHR11476:SF9 3 429 4.8E-226 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Gene3D G3DSA:3.30.930.10 222 323 1.0E-93 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Gene3D G3DSA:3.30.930.10 5 186 1.0E-93 T 26-04-2016 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 Pfam PF03129 Anticodon binding domain 335 422 2.0E-8 T 26-04-2016 IPR004154 Anticodon-binding PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 PANTHER PTHR11476 3 429 4.8E-226 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 2.6E-152 T 26-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 PAM18_RS05765 e9c8a6b313cc274ddce50556a2d5b23e 429 PIRSF PIRSF001549 2 425 2.0E-115 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 PANTHER PTHR11908 1 137 2.3E-37 T 26-04-2016 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 SUPERFAMILY SSF54292 6 90 8.78E-25 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 55 2.8E-6 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 Pfam PF01799 [2Fe-2S] binding domain 75 147 2.8E-27 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 Gene3D G3DSA:3.10.20.30 4 76 1.7E-27 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 Gene3D G3DSA:1.10.150.120 77 158 3.1E-32 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 SUPERFAMILY SSF47741 86 156 1.01E-29 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS17655 b06725ca0e79c21277d651aabbff4f3a 163 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 529 2.1E-45 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 SUPERFAMILY SSF58104 230 530 4.71E-70 T 26-04-2016 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 PANTHER PTHR32089:SF34 154 531 2.0E-114 T 26-04-2016 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 Gene3D G3DSA:1.10.287.950 284 500 9.3E-59 T 26-04-2016 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 PANTHER PTHR32089 154 531 2.0E-114 T 26-04-2016 PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 52 141 2.0E-15 T 26-04-2016 IPR029095 NarX-like, N-terminal PAM18_RS11170 5634fa089a4ce364f1d69fb0385c8616 531 SMART SM00283 266 530 1.1E-70 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS00590 68d43444f221e5f3c88bb7e0b0ed4c7a 157 SUPERFAMILY SSF46785 6 144 2.03E-43 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00590 68d43444f221e5f3c88bb7e0b0ed4c7a 157 PANTHER PTHR33204 1 157 7.1E-112 T 26-04-2016 PAM18_RS00590 68d43444f221e5f3c88bb7e0b0ed4c7a 157 Pfam PF01638 HxlR-like helix-turn-helix 19 104 3.9E-23 T 26-04-2016 IPR002577 Helix-turn-helix, HxlR type PAM18_RS00590 68d43444f221e5f3c88bb7e0b0ed4c7a 157 Gene3D G3DSA:1.10.10.10 2 109 1.1E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00590 68d43444f221e5f3c88bb7e0b0ed4c7a 157 PANTHER PTHR33204:SF14 1 157 7.1E-112 T 26-04-2016 PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 Pfam PF00083 Sugar (and other) transporter 48 438 6.4E-52 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 Gene3D G3DSA:1.20.1250.20 250 432 1.7E-17 T 26-04-2016 PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 Gene3D G3DSA:1.20.1250.20 26 202 7.5E-23 T 26-04-2016 PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 SUPERFAMILY SSF103473 8 436 1.7E-72 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS03835 d490537d4193e94f9864aaa1358f7f06 442 PANTHER PTHR23511 8 437 4.2E-104 T 26-04-2016 PAM18_RS14850 14a172047736140b84ada895cf2cfa37 55 PANTHER PTHR36569 1 54 3.0E-31 T 26-04-2016 PAM18_RS14850 14a172047736140b84ada895cf2cfa37 55 PANTHER PTHR36569:SF1 1 54 3.0E-31 T 26-04-2016 PAM18_RS14850 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.3E-9 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS14850 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 4.9E-9 T 26-04-2016 IPR019626 Stress-induced protein, KGG, repeat PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 Gene3D G3DSA:3.90.470.20 124 213 1.4E-7 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 125 220 2.8E-9 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 PRINTS PR01399 Enterobactin synthetase component D signature 91 109 6.8E-18 T 26-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 PRINTS PR01399 Enterobactin synthetase component D signature 169 185 6.8E-18 T 26-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 6.8E-18 T 26-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 PANTHER PTHR38096 1 242 5.4E-80 T 26-04-2016 PAM18_RS19765 915c4bc930917c89885a34b6c4d4f086 242 SUPERFAMILY SSF56214 123 221 5.41E-13 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 PAM18_RS17605 a76cc8878ebd83c8fd17069df0e7e271 308 Gene3D G3DSA:3.40.50.2300 134 251 5.9E-10 T 26-04-2016 PAM18_RS17605 a76cc8878ebd83c8fd17069df0e7e271 308 PANTHER PTHR35271 57 305 1.1E-62 T 26-04-2016 PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 22 83 8.42E-12 T 26-04-2016 PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 255 359 8.42E-12 T 26-04-2016 PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 132 218 8.42E-12 T 26-04-2016 PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 PANTHER PTHR34847 4 582 1.3E-144 T 26-04-2016 PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF16861 Carbamoyltransferase C-terminus 408 575 1.9E-61 T 26-04-2016 IPR031730 Carbamoyltransferase, C-terminal PAM18_RS26190 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF02543 Carbamoyltransferase N-terminus 5 354 2.6E-57 T 26-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 PANTHER PTHR30290 10 526 7.2E-193 T 26-04-2016 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 PANTHER PTHR30290:SF14 10 526 7.2E-193 T 26-04-2016 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 442 1.4E-86 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 Gene3D G3DSA:3.10.105.10 283 495 3.5E-56 T 26-04-2016 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 PIRSF PIRSF002741 16 525 5.9E-101 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 SUPERFAMILY SSF53850 24 523 6.36E-135 T 26-04-2016 PAM18_RS27780 34d9d15df971319bbf1953683dac09f3 526 Gene3D G3DSA:3.90.76.10 32 212 1.8E-41 T 26-04-2016 PAM18_RS15695 88e81ce7c991d9db2d50a1d1d1bec91d 145 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 138 1.1E-13 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15695 88e81ce7c991d9db2d50a1d1d1bec91d 145 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 11 143 1.0E-63 T 26-04-2016 IPR030991 Cytochrome c-550 PedF PAM18_RS15695 88e81ce7c991d9db2d50a1d1d1bec91d 145 Gene3D G3DSA:1.10.760.10 53 142 6.5E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15695 88e81ce7c991d9db2d50a1d1d1bec91d 145 SUPERFAMILY SSF46626 11 141 4.66E-18 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PANTHER PTHR11786:SF0 1 262 3.5E-68 T 26-04-2016 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PANTHER PTHR11786 1 262 3.5E-68 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 SUPERFAMILY SSF54001 3 263 7.85E-75 T 26-04-2016 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 Gene3D G3DSA:3.30.2140.10 4 89 7.2E-50 T 26-04-2016 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 Gene3D G3DSA:3.30.2140.10 189 264 7.2E-50 T 26-04-2016 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 49 72 3.7E-12 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 25 48 3.7E-12 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 73 95 3.7E-12 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 107 132 3.7E-12 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS25280 013664ac75830dbd914e9b1d30742c06 279 Pfam PF00797 N-acetyltransferase 26 261 2.1E-71 T 26-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 PAM18_RS15460 c8daf8a5072e01d31281555e6609db4d 99 PIRSF PIRSF037266 1 97 3.5E-45 T 26-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 PAM18_RS15460 c8daf8a5072e01d31281555e6609db4d 99 Gene3D G3DSA:1.10.10.10 14 90 3.2E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15460 c8daf8a5072e01d31281555e6609db4d 99 SUPERFAMILY SSF46785 9 91 2.87E-6 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15460 c8daf8a5072e01d31281555e6609db4d 99 Pfam PF09904 Winged helix-turn helix 5 94 1.5E-39 T 26-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 SUPERFAMILY SSF51735 4 255 1.08E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 Gene3D G3DSA:3.40.50.720 5 255 4.4E-54 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 3.7E-39 T 26-04-2016 PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PANTHER PTHR24322 159 191 1.4E-89 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PANTHER PTHR24322 13 143 1.4E-89 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PANTHER PTHR24322:SF456 159 191 1.4E-89 T 26-04-2016 PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PANTHER PTHR24322:SF456 13 143 1.4E-89 T 26-04-2016 PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.5E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.5E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.5E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 8.5E-15 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS10490 c50b9cad337dbe771f0afd5ddbc39f26 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 0.005 T 26-04-2016 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 191 4.3E-61 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 PANTHER PTHR30335:SF0 2 194 8.9E-127 T 26-04-2016 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 PIRSF PIRSF006102 1 193 1.7E-60 T 26-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 192 24.557 T 26-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 PANTHER PTHR30335 2 194 8.9E-127 T 26-04-2016 PAM18_RS07610 3ff9d1242dba712eaa3ef5fb8d02416a 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 192 1.9E-82 T 26-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 PAM18_RS02965 d66e0c42c92fb9d7c6192395a96a6827 168 Pfam PF13590 Domain of unknown function (DUF4136) 33 161 1.2E-7 T 26-04-2016 IPR025411 Domain of unknown function DUF4136 PAM18_RS10870 d2d4a53d9ef72a984a2399285afbc2a4 402 Pfam PF06224 Winged helix DNA-binding domain 38 379 4.8E-82 T 26-04-2016 IPR009351 Protein of unknown function DUF1006 PAM18_RS10870 d2d4a53d9ef72a984a2399285afbc2a4 402 PANTHER PTHR30528 2 400 4.6E-135 T 26-04-2016 PAM18_RS00945 65405773789dd66e166ca7e85b595d0b 271 SUPERFAMILY SSF51197 9 253 2.75E-41 T 26-04-2016 PAM18_RS00945 65405773789dd66e166ca7e85b595d0b 271 PANTHER PTHR10696 28 254 7.6E-33 T 26-04-2016 PAM18_RS00945 65405773789dd66e166ca7e85b595d0b 271 Gene3D G3DSA:3.60.130.10 19 255 1.6E-32 T 26-04-2016 PAM18_RS00945 65405773789dd66e166ca7e85b595d0b 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 251 3.6E-34 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS24900 d3a345f3293a1269d94bb98face2ba59 135 Pfam PF13664 Domain of unknown function (DUF4149) 13 97 2.1E-5 T 26-04-2016 IPR025423 Domain of unknown function DUF4149 PAM18_RS02215 28704e1ce7c27a53532e17b8150561d1 416 PANTHER PTHR30569 1 416 1.1E-111 T 26-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 PAM18_RS02215 28704e1ce7c27a53532e17b8150561d1 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 8.7E-60 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS14455 942176805a780552aa49ff024740e686 356 SUPERFAMILY SSF56281 77 153 4.6E-38 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS14455 942176805a780552aa49ff024740e686 356 SUPERFAMILY SSF56281 180 329 4.6E-38 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS14455 942176805a780552aa49ff024740e686 356 PANTHER PTHR15032:SF4 41 341 1.5E-103 T 26-04-2016 PAM18_RS14455 942176805a780552aa49ff024740e686 356 Pfam PF12706 Beta-lactamase superfamily domain 94 288 6.9E-46 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS14455 942176805a780552aa49ff024740e686 356 PANTHER PTHR15032 41 341 1.5E-103 T 26-04-2016 PAM18_RS14455 942176805a780552aa49ff024740e686 356 Gene3D G3DSA:3.60.15.10 41 340 4.7E-99 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS28430 79fde186e83904d317ad26c4bdc7a4a3 241 SUPERFAMILY SSF51445 105 200 6.59E-7 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS28430 79fde186e83904d317ad26c4bdc7a4a3 241 Pfam PF11340 Protein of unknown function (DUF3142) 99 184 3.9E-16 T 26-04-2016 IPR021488 Protein of unknown function DUF3142 PAM18_RS28430 79fde186e83904d317ad26c4bdc7a4a3 241 Gene3D G3DSA:3.20.20.80 133 189 2.2E-4 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 51 60 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 78 89 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 123 135 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 103 111 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.35E-32 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 Pfam PF00117 Glutamine amidotransferase class-I 5 186 7.6E-45 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PANTHER PTHR11922 1 190 4.2E-81 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 1.1E-47 T 26-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 SUPERFAMILY SSF52317 1 189 9.48E-47 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PANTHER PTHR11922:SF25 1 190 4.2E-81 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 Gene3D G3DSA:3.40.50.880 1 188 9.4E-55 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 6.25E-8 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 6.25E-8 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 2.42E-14 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 2.42E-14 T 26-04-2016 PAM18_RS20655 523c3790f6645ae8e3216d5173eb4778 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.42E-14 T 26-04-2016 PAM18_RS25530 5401c63ffa02ff3b0058ade8276d89e4 135 SUPERFAMILY SSF68912 100 133 5.89E-5 T 26-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PAM18_RS25530 5401c63ffa02ff3b0058ade8276d89e4 135 Gene3D G3DSA:1.10.720.10 102 131 7.6E-5 T 26-04-2016 PAM18_RS25530 5401c63ffa02ff3b0058ade8276d89e4 135 Pfam PF07498 Rho termination factor, N-terminal domain 102 133 1.6E-8 T 26-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 PAM18_RS22180 e1d6715e1a1e82c1778a9aaab6f8ac5e 230 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 171 220 3.7E-7 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS22180 e1d6715e1a1e82c1778a9aaab6f8ac5e 230 Gene3D G3DSA:3.30.1150.10 124 225 2.8E-16 T 26-04-2016 PAM18_RS22180 e1d6715e1a1e82c1778a9aaab6f8ac5e 230 SUPERFAMILY SSF74653 53 66 4.32E-15 T 26-04-2016 PAM18_RS22180 e1d6715e1a1e82c1778a9aaab6f8ac5e 230 SUPERFAMILY SSF74653 130 221 4.32E-15 T 26-04-2016 PAM18_RS22180 e1d6715e1a1e82c1778a9aaab6f8ac5e 230 Pfam PF13103 TonB C terminal 145 212 1.1E-6 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS24670 8542b6bb878abe64ec8303937bcdf75e 107 Pfam PF00355 Rieske [2Fe-2S] domain 3 86 3.1E-11 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS24670 8542b6bb878abe64ec8303937bcdf75e 107 SUPERFAMILY SSF50022 4 106 3.93E-25 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS24670 8542b6bb878abe64ec8303937bcdf75e 107 PANTHER PTHR40261:SF2 1 107 2.5E-51 T 26-04-2016 PAM18_RS24670 8542b6bb878abe64ec8303937bcdf75e 107 Gene3D G3DSA:2.102.10.10 2 106 5.1E-25 T 26-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PAM18_RS24670 8542b6bb878abe64ec8303937bcdf75e 107 PANTHER PTHR40261 1 107 2.5E-51 T 26-04-2016 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 Gene3D G3DSA:1.20.1640.10 97 286 1.0E-25 T 26-04-2016 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 SUPERFAMILY SSF82866 70 286 4.32E-38 T 26-04-2016 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 Pfam PF07549 SecD/SecF GG Motif 31 57 1.7E-12 T 26-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 92 276 1.4E-54 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 Pfam PF02355 Protein export membrane protein 111 287 4.4E-64 T 26-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 8 290 28.186 T 26-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 PANTHER PTHR30081 4 305 7.2E-85 T 26-04-2016 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 36 279 9.7E-80 T 26-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 PRINTS PR01755 Bacterial translocase SecF protein signature 195 213 2.6E-32 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 PRINTS PR01755 Bacterial translocase SecF protein signature 35 50 2.6E-32 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 PRINTS PR01755 Bacterial translocase SecF protein signature 147 161 2.6E-32 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS05675 29c6769fa5086076a5ebf6afd8752ba2 306 PRINTS PR01755 Bacterial translocase SecF protein signature 227 242 2.6E-32 T 26-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAM18_RS23350 c3d1998b2501437090f11a12e88e8ae6 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 3 262 4.9E-60 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PAM18_RS23350 c3d1998b2501437090f11a12e88e8ae6 331 PANTHER PTHR34138:SF1 1 331 4.7E-84 T 26-04-2016 PAM18_RS23350 c3d1998b2501437090f11a12e88e8ae6 331 PANTHER PTHR34138 1 331 4.7E-84 T 26-04-2016 PAM18_RS23350 c3d1998b2501437090f11a12e88e8ae6 331 Pfam PF04085 rod shape-determining protein MreC 109 254 4.1E-38 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PAM18_RS23350 c3d1998b2501437090f11a12e88e8ae6 331 PIRSF PIRSF038471 1 269 2.8E-74 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 Pfam PF00202 Aminotransferase class-III 19 382 1.3E-79 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 SUPERFAMILY SSF53383 15 384 5.57E-101 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 Gene3D G3DSA:3.40.640.10 56 288 3.0E-62 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 PANTHER PTHR11986:SF88 1 390 6.5E-265 T 26-04-2016 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 PANTHER PTHR11986 1 390 6.5E-265 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 Gene3D G3DSA:3.90.1150.10 293 384 7.4E-31 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 Gene3D G3DSA:3.90.1150.10 9 53 7.4E-31 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS02685 37bfc65b80739b0393871c9ba443e1f5 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 247 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 PANTHER PTHR10422:SF24 19 462 3.3E-139 T 26-04-2016 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 SUPERFAMILY SSF81442 12 458 2.75E-89 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 PANTHER PTHR10422 19 462 3.3E-139 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 259 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 Gene3D G3DSA:1.20.210.10 13 456 1.5E-19 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS02650 8abb27d7832510305658e76238c9aa5f 465 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 8.1E-83 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18860 95e2f68a34a36c6cfd233e206404abf4 150 PANTHER PTHR38766 8 150 1.6E-42 T 26-04-2016 PAM18_RS18860 95e2f68a34a36c6cfd233e206404abf4 150 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 118 1.9E-22 T 26-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PAM18_RS18860 95e2f68a34a36c6cfd233e206404abf4 150 PANTHER PTHR38766:SF1 8 150 1.6E-42 T 26-04-2016 PAM18_RS18860 95e2f68a34a36c6cfd233e206404abf4 150 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 142 1.1E-19 T 26-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 338 2.4E-44 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 Gene3D G3DSA:3.30.70.270 191 343 2.3E-49 T 26-04-2016 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 SMART SM00267 178 345 2.8E-57 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 PANTHER PTHR10799 107 338 3.8E-24 T 26-04-2016 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 Gene3D G3DSA:3.30.450.20 18 152 1.6E-29 T 26-04-2016 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 PANTHER PTHR10799:SF710 107 338 3.8E-24 T 26-04-2016 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 338 8.1E-46 T 26-04-2016 IPR000160 GGDEF domain PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 SUPERFAMILY SSF55073 194 339 1.02E-43 T 26-04-2016 IPR029787 Nucleotide cyclase PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 Pfam PF08447 PAS fold 44 132 5.1E-24 T 26-04-2016 IPR013655 PAS fold-3 GO:0005515 PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 SMART SM00091 21 89 4.7E-5 T 26-04-2016 IPR000014 PAS domain PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 146 8.1E-8 T 26-04-2016 IPR000014 PAS domain PAM18_RS01705 7bcb31c3be64b8ccf17a80445db2c6ee 345 SUPERFAMILY SSF55785 27 140 9.25E-19 T 26-04-2016 IPR000014 PAS domain PAM18_RS03885 0624a3c487fe6dcf862ebed54770e694 133 PANTHER PTHR33337 3 133 1.0E-49 T 26-04-2016 PAM18_RS03885 0624a3c487fe6dcf862ebed54770e694 133 PANTHER PTHR33337:SF11 3 133 1.0E-49 T 26-04-2016 PAM18_RS03885 0624a3c487fe6dcf862ebed54770e694 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 116 1.7E-16 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS03885 0624a3c487fe6dcf862ebed54770e694 133 Gene3D G3DSA:3.90.1590.10 1 133 3.0E-40 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS03885 0624a3c487fe6dcf862ebed54770e694 133 SUPERFAMILY SSF51316 1 132 1.15E-41 T 26-04-2016 IPR011057 Mss4-like PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 PANTHER PTHR12169 1 364 4.3E-202 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 Pfam PF03969 AFG1-like ATPase 1 360 1.1E-169 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 Gene3D G3DSA:3.40.50.300 5 169 1.3E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 PANTHER PTHR12169:SF11 1 364 4.3E-202 T 26-04-2016 PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 SUPERFAMILY SSF52540 53 197 3.84E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS23140 0ed0ee5e702838f652009009a6127f7e 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 54.614 T 26-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF53850 104 312 7.19E-39 T 26-04-2016 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 102 190 8.3E-16 T 26-04-2016 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 PANTHER PTHR30126:SF3 13 315 2.0E-151 T 26-04-2016 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:1.10.10.10 14 99 3.2E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 191 276 2.5E-15 T 26-04-2016 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 2.3E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 PANTHER PTHR30126 13 315 2.0E-151 T 26-04-2016 PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF46785 13 123 1.47E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS14530 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF03466 LysR substrate binding domain 103 308 1.2E-39 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 SMART SM00903 15 162 1.0E-52 T 26-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 PANTHER PTHR30466 7 163 1.7E-72 T 26-04-2016 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 163 4.0E-72 T 26-04-2016 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 UniPathway: UPA00208 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 PANTHER PTHR30466:SF2 7 163 1.7E-72 T 26-04-2016 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 Gene3D G3DSA:2.30.110.10 5 162 3.2E-50 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 SUPERFAMILY SSF50475 11 163 2.21E-47 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS04320 fbcc274e61d8ec89afce90e311d92807 170 Pfam PF01613 Flavin reductase like domain 15 163 3.6E-28 T 26-04-2016 IPR002563 Flavin reductase like domain GO:0010181 PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 PANTHER PTHR11085:SF17 7 254 4.8E-75 T 26-04-2016 PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 PANTHER PTHR11085 7 254 4.8E-75 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Gene3D G3DSA:3.30.1600.10 34 78 8.4E-18 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Gene3D G3DSA:3.30.1600.10 130 175 8.4E-18 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Pfam PF02146 Sir2 family 25 202 3.5E-37 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 SUPERFAMILY SSF52467 6 254 1.12E-69 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Gene3D G3DSA:3.40.50.1220 185 251 1.6E-34 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Gene3D G3DSA:3.40.50.1220 86 129 1.6E-34 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19605 03247097c08fbe75ec180c1fc809cba9 256 Gene3D G3DSA:3.40.50.1220 4 33 1.6E-34 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 SUPERFAMILY SSF46785 2 69 7.12E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:1.10.10.10 1 67 4.4E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 PANTHER PTHR11751:SF314 86 467 6.0E-192 T 26-04-2016 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 Pfam PF00155 Aminotransferase class I and II 167 449 5.5E-24 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 SMART SM00345 7 66 9.4E-13 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 PANTHER PTHR11751 86 467 6.0E-192 T 26-04-2016 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:3.40.640.10 145 349 1.6E-66 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:3.90.1150.10 350 468 1.1E-5 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 SUPERFAMILY SSF53383 98 467 3.85E-90 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS04110 51e6d3eecd731e702448303ea2390b23 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 9.9E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS00515 5c07db15ad49f4a751b6edfad83dcb01 415 SUPERFAMILY SSF48371 78 238 4.07E-12 T 26-04-2016 IPR016024 Armadillo-type fold GO:0005488 PAM18_RS00515 5c07db15ad49f4a751b6edfad83dcb01 415 Gene3D G3DSA:1.25.10.10 77 222 2.9E-9 T 26-04-2016 IPR011989 Armadillo-like helical PAM18_RS00515 5c07db15ad49f4a751b6edfad83dcb01 415 Pfam PF13646 HEAT repeats 154 221 1.6E-7 T 26-04-2016 PAM18_RS00515 5c07db15ad49f4a751b6edfad83dcb01 415 TIGRFAM TIGR02270 TIGR02270: conserved hypothetical protein 8 413 4.2E-192 T 26-04-2016 IPR011959 Conserved hypothetical protein CHP02270 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 PIRSF PIRSF001434 7 403 9.6E-135 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 2.7E-144 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 8.6E-205 T 26-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 Gene3D G3DSA:3.40.640.10 19 266 3.1E-93 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 PANTHER PTHR11808 1 403 7.3E-255 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 Gene3D G3DSA:3.90.1150.10 268 402 7.9E-51 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 PANTHER PTHR11808:SF36 1 403 7.3E-255 T 26-04-2016 PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 SUPERFAMILY SSF53383 41 401 2.7E-123 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS09530 8fbbaf8a65853fdd7dca178c5a6109e6 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 PAM18_RS11190 f4a3128ee0d84a634372ca7b0d60a33b 185 Pfam PF11188 Protein of unknown function (DUF2975) 71 181 1.1E-10 T 26-04-2016 IPR021354 Protein of unknown function DUF2975 PAM18_RS20175 69c2cf9af2a9d2ffb66adb71e817fafd 206 Gene3D G3DSA:2.160.10.10 86 175 8.0E-18 T 26-04-2016 PAM18_RS20175 69c2cf9af2a9d2ffb66adb71e817fafd 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 160 8.6E-5 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS20175 69c2cf9af2a9d2ffb66adb71e817fafd 206 SUPERFAMILY SSF51161 47 175 2.77E-19 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 SUPERFAMILY SSF56281 22 521 1.54E-154 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Pfam PF14864 Alkyl sulfatase C-terminal 529 652 5.0E-33 T 26-04-2016 IPR029229 Alkyl sulfatase, C-terminal PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 SMART SM00849 122 344 5.1E-24 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Pfam PF14863 Alkyl sulfatase dimerisation 381 519 2.2E-56 T 26-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 PANTHER PTHR11935:SF93 244 469 2.1E-187 T 26-04-2016 PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 PANTHER PTHR11935:SF93 73 227 2.1E-187 T 26-04-2016 PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 PANTHER PTHR11935 244 469 2.1E-187 T 26-04-2016 PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 PANTHER PTHR11935 73 227 2.1E-187 T 26-04-2016 PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Gene3D G3DSA:3.30.1050.10 540 641 2.5E-9 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Pfam PF00753 Metallo-beta-lactamase superfamily 118 344 1.1E-47 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Gene3D G3DSA:3.60.15.10 250 374 4.7E-41 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 Gene3D G3DSA:3.60.15.10 107 208 4.7E-41 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS21945 b5d2d563e6be0ba8032dbedb37754510 658 SUPERFAMILY SSF55718 531 652 3.06E-35 T 26-04-2016 IPR003033 SCP2 sterol-binding domain PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PANTHER PTHR13789 2 366 1.3E-122 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PANTHER PTHR13789:SF210 2 366 1.3E-122 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 Pfam PF01494 FAD binding domain 6 348 5.8E-34 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 SUPERFAMILY SSF51905 271 364 5.44E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 SUPERFAMILY SSF51905 6 174 5.44E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 Gene3D G3DSA:3.50.50.60 272 351 1.5E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 Gene3D G3DSA:3.50.50.60 6 180 1.5E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.5E-20 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 1.5E-20 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.5E-20 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-20 T 26-04-2016 PAM18_RS03820 f1f97ab32fed645616ffdd41902cd38f 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.5E-20 T 26-04-2016 PAM18_RS19615 d3e40b6d589cbc7ce8df68e3ffb03eb2 254 Pfam PF02274 Amidinotransferase 29 252 1.3E-21 T 26-04-2016 PAM18_RS19615 d3e40b6d589cbc7ce8df68e3ffb03eb2 254 PANTHER PTHR12737 2 254 2.8E-78 T 26-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 PAM18_RS19615 d3e40b6d589cbc7ce8df68e3ffb03eb2 254 PANTHER PTHR12737:SF9 2 254 2.8E-78 T 26-04-2016 PAM18_RS19615 d3e40b6d589cbc7ce8df68e3ffb03eb2 254 Gene3D G3DSA:3.75.10.10 2 253 1.5E-78 T 26-04-2016 PAM18_RS19615 d3e40b6d589cbc7ce8df68e3ffb03eb2 254 SUPERFAMILY SSF55909 2 253 1.45E-58 T 26-04-2016 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 SMART SM00331 174 391 3.9E-13 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 Gene3D G3DSA:3.40.50.2300 7 147 2.1E-37 T 26-04-2016 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 SUPERFAMILY SSF52172 7 149 5.98E-40 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 PANTHER PTHR26402 194 203 2.3E-38 T 26-04-2016 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 PANTHER PTHR26402 6 135 2.3E-38 T 26-04-2016 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 SMART SM00448 6 118 2.1E-36 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 391 8.0E-31 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 PAM18_RS11110 ea24d4be3421c764f6dd47b056956e9f 394 Pfam PF00072 Response regulator receiver domain 9 110 1.5E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS21880 08e9e667d1a94e1de8e66971c375192a 156 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 147 9.9E-18 T 26-04-2016 IPR009936 Protein of unknown function DUF1468 PAM18_RS01730 c89522991f9bf1b6edb7147599976672 265 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 27 164 2.2E-25 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS01730 c89522991f9bf1b6edb7147599976672 265 Gene3D G3DSA:3.40.50.150 22 172 6.5E-15 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01730 c89522991f9bf1b6edb7147599976672 265 SUPERFAMILY SSF53335 17 191 3.32E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS01730 c89522991f9bf1b6edb7147599976672 265 Pfam PF05050 Methyltransferase FkbM domain 29 176 5.3E-19 T 26-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS08045 ef1cce59dd5372ed5f2e2051e6ce8712 390 PANTHER PTHR30294 6 390 1.8E-204 T 26-04-2016 PAM18_RS08045 ef1cce59dd5372ed5f2e2051e6ce8712 390 PANTHER PTHR30294:SF19 6 390 1.8E-204 T 26-04-2016 PAM18_RS08045 ef1cce59dd5372ed5f2e2051e6ce8712 390 Pfam PF12698 ABC-2 family transporter protein 38 376 1.4E-20 T 26-04-2016 PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 Pfam PF04072 Leucine carboxyl methyltransferase 19 175 6.6E-19 T 26-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 SUPERFAMILY SSF53335 13 249 2.22E-53 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 PANTHER PTHR13600 13 187 1.4E-61 T 26-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 PANTHER PTHR13600:SF19 13 187 1.4E-61 T 26-04-2016 PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 Gene3D G3DSA:3.40.50.150 5 241 2.4E-33 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16305 ff51c90b744ff7bbe248ab02e3459372 275 PIRSF PIRSF028177 1 274 9.9E-97 T 26-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 PAM18_RS03025 9b982941f38c12959be9bf16460707f6 224 Pfam PF00483 Nucleotidyl transferase 2 117 7.3E-16 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 PAM18_RS03025 9b982941f38c12959be9bf16460707f6 224 SUPERFAMILY SSF53448 1 220 6.08E-57 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS03025 9b982941f38c12959be9bf16460707f6 224 PANTHER PTHR22572 2 222 9.8E-48 T 26-04-2016 PAM18_RS03025 9b982941f38c12959be9bf16460707f6 224 Gene3D G3DSA:3.90.550.10 1 223 2.6E-54 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 SUPERFAMILY SSF54637 1 142 3.67E-53 T 26-04-2016 IPR029069 HotDog domain PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 PANTHER PTHR30272 1 146 4.9E-83 T 26-04-2016 PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Pfam PF07977 FabA-like domain 11 137 1.1E-38 T 26-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Gene3D G3DSA:3.10.129.10 1 142 7.6E-60 T 26-04-2016 IPR029069 HotDog domain PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 36.125 T 26-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PAM18_RS06585 a9c7790e5cafa0a47c4ae5cecdff8410 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 4.7E-65 T 26-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 Pfam PF01047 MarR family 47 110 3.4E-11 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 Gene3D G3DSA:1.10.10.10 14 151 1.7E-34 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 PANTHER PTHR33164:SF5 13 158 4.1E-58 T 26-04-2016 PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 SUPERFAMILY SSF46785 15 155 2.02E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 SMART SM00347 40 143 2.9E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PAM18_RS10965 66e3dc94bcb01564c04ecadf4eb2e46f 163 PANTHER PTHR33164 13 158 4.1E-58 T 26-04-2016 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 SUPERFAMILY SSF74653 187 267 1.83E-24 T 26-04-2016 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 130 140 1.1E-8 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 187 208 1.1E-8 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 208 226 1.1E-8 T 26-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 Gene3D G3DSA:3.30.1150.10 160 270 1.5E-20 T 26-04-2016 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 PANTHER PTHR33446 22 270 6.6E-27 T 26-04-2016 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 269 5.2E-24 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS01000 0db1204deca924c4846ef703b59b8017 270 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 270 1.2E-25 T 26-04-2016 IPR006260 TonB, C-terminal GO:0006810 PAM18_RS20380 77462f223b16f4ff0a085f40d6a4923d 154 PANTHER PTHR35603:SF1 2 152 4.6E-52 T 26-04-2016 PAM18_RS20380 77462f223b16f4ff0a085f40d6a4923d 154 PANTHER PTHR35603 2 152 4.6E-52 T 26-04-2016 PAM18_RS20380 77462f223b16f4ff0a085f40d6a4923d 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 2.1E-7 T 26-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 PAM18_RS20625 536e991b24dfdb64bc3a2e11390d4714 157 Pfam PF00578 AhpC/TSA family 5 133 3.4E-36 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 PAM18_RS20625 536e991b24dfdb64bc3a2e11390d4714 157 Gene3D G3DSA:3.40.30.10 2 154 3.2E-50 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20625 536e991b24dfdb64bc3a2e11390d4714 157 PIRSF PIRSF000239 1 155 6.8E-29 T 26-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 PAM18_RS20625 536e991b24dfdb64bc3a2e11390d4714 157 SUPERFAMILY SSF52833 3 154 4.56E-51 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS20625 536e991b24dfdb64bc3a2e11390d4714 157 PANTHER PTHR10681 3 154 3.6E-50 T 26-04-2016 PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.0E-35 T 26-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 Gene3D G3DSA:3.40.30.10 3 83 7.7E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 46 59 1.2E-15 T 26-04-2016 IPR014025 Glutaredoxin subgroup PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 60 73 1.2E-15 T 26-04-2016 IPR014025 Glutaredoxin subgroup PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-15 T 26-04-2016 IPR014025 Glutaredoxin subgroup PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 SUPERFAMILY SSF52833 1 83 1.2E-29 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 Pfam PF00462 Glutaredoxin 4 63 8.2E-22 T 26-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 PANTHER PTHR10168 3 82 7.8E-30 T 26-04-2016 PAM18_RS26805 c4a55980bb84ae5ee46d0e5927b71929 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 26-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 7.1E-30 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 SUPERFAMILY SSF52788 1 136 1.44E-36 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 SMART SM00226 1 136 2.2E-54 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 PANTHER PTHR11717:SF18 1 134 2.0E-32 T 26-04-2016 PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 PANTHER PTHR11717 1 134 2.0E-32 T 26-04-2016 PAM18_RS14190 99221a8d80cfea7e174df13ea199fde7 156 Gene3D G3DSA:3.40.50.270 1 134 1.6E-36 T 26-04-2016 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 Gene3D G3DSA:1.10.1040.10 165 293 6.5E-44 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 SUPERFAMILY SSF48179 164 293 1.09E-41 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 PANTHER PTHR22981 3 292 1.3E-122 T 26-04-2016 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 26-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 SUPERFAMILY SSF51735 1 162 5.02E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 9.6E-53 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 1.2E-33 T 26-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 PIRSF PIRSF000103 1 298 6.3E-83 T 26-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 7.4E-125 T 26-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 PAM18_RS21930 99b932418ee3770d6ae2e6fb638a1c90 298 Gene3D G3DSA:3.40.50.720 1 163 2.4E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS18345 416b3018c2b7e3df8e10a412d5b11319 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 21 93 2.7E-17 T 26-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PAM18_RS18345 416b3018c2b7e3df8e10a412d5b11319 111 PANTHER PTHR36835 1 111 6.6E-44 T 26-04-2016 PAM18_RS18345 416b3018c2b7e3df8e10a412d5b11319 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-33 T 26-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Gene3D G3DSA:1.10.275.10 8 112 2.9E-42 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 458 1.1E-193 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 44.006 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Gene3D G3DSA:1.20.200.10 113 380 5.6E-108 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PANTHER PTHR11444:SF3 7 461 2.2E-237 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Gene3D G3DSA:1.10.40.30 381 438 4.6E-31 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PANTHER PTHR11444 7 461 2.2E-237 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 SUPERFAMILY SSF48557 10 461 5.97E-156 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Pfam PF00206 Lyase 12 306 2.4E-77 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 1.3E-25 T 26-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.3E-30 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.3E-30 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.3E-30 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 1.3E-30 T 26-04-2016 IPR000362 Fumarate lyase family PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 1.9E-69 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.9E-69 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.9E-69 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 1.9E-69 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 1.9E-69 T 26-04-2016 PAM18_RS27510 7d1e69899a5390370be821f22ef29fa3 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.9E-69 T 26-04-2016 PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 SUPERFAMILY SSF89562 4 158 3.79E-52 T 26-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 PANTHER PTHR33254 1 160 4.9E-101 T 26-04-2016 PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 Pfam PF03737 Demethylmenaquinone methyltransferase 5 153 1.9E-46 T 26-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 PANTHER PTHR33254:SF7 1 160 4.9E-101 T 26-04-2016 PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.3E-73 T 26-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 PAM18_RS16790 593c4af23b6a09f72659a5c2766d9cbd 162 Gene3D G3DSA:3.50.30.40 2 158 1.3E-58 T 26-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 PANTHER PTHR10909 2 380 5.4E-161 T 26-04-2016 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 1.9E-49 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Gene3D G3DSA:1.10.540.10 5 118 9.0E-33 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 5.0E-30 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Gene3D G3DSA:2.40.110.10 121 217 2.0E-42 T 26-04-2016 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 4.1E-30 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 SUPERFAMILY SSF56645 6 243 1.24E-78 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 Gene3D G3DSA:1.20.140.10 218 381 6.0E-70 T 26-04-2016 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 PANTHER PTHR10909:SF145 2 380 5.4E-161 T 26-04-2016 PAM18_RS17510 371f5bfd44e644cc549d95a0452f9d0c 384 SUPERFAMILY SSF47203 229 380 2.9E-56 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS22535 35fbccb431880e94f1a8ecdacaae3bdd 326 PANTHER PTHR35337 1 323 7.7E-55 T 26-04-2016 PAM18_RS22535 35fbccb431880e94f1a8ecdacaae3bdd 326 Pfam PF01944 Stage II sporulation protein M 110 290 7.9E-36 T 26-04-2016 IPR002798 Stage II sporulation protein M-like PAM18_RS01670 f772651e4238824cbaf19539148597db 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 7 154 1.7E-44 T 26-04-2016 IPR018729 Protein of unknown function DUF2269, transmembrane PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 PANTHER PTHR11085 1 246 1.3E-85 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 12 249 56.526 T 26-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Gene3D G3DSA:3.30.1600.10 118 168 4.4E-26 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Gene3D G3DSA:3.30.1600.10 30 68 4.4E-26 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Gene3D G3DSA:3.40.50.1220 175 246 4.4E-40 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Gene3D G3DSA:3.40.50.1220 3 29 4.4E-40 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Gene3D G3DSA:3.40.50.1220 80 117 4.4E-40 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 Pfam PF02146 Sir2 family 19 199 1.9E-50 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 PAM18_RS19955 e6b8316f5fc1e888753e176b7f38eccd 250 SUPERFAMILY SSF52467 3 247 2.25E-82 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 PANTHER PTHR10920:SF20 2 206 1.3E-128 T 26-04-2016 PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 PIRSF PIRSF005461 1 207 1.3E-80 T 26-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 SUPERFAMILY SSF53335 27 205 6.1E-43 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 Gene3D G3DSA:3.40.50.150 3 205 2.1E-72 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 Pfam PF01728 FtsJ-like methyltransferase 28 204 3.0E-56 T 26-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.627 T 26-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PAM18_RS24890 69531ab9627fcc8148a496ee600c1943 207 PANTHER PTHR10920 2 206 1.3E-128 T 26-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 Pfam PF05506 Domain of unknown function (DUF756) 590 672 6.7E-19 T 26-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 Pfam PF05506 Domain of unknown function (DUF756) 490 577 1.2E-18 T 26-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 686 1.1E-300 T 26-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 Pfam PF04185 Phosphoesterase family 48 422 2.4E-133 T 26-04-2016 IPR007312 Phosphoesterase GO:0016788 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 PANTHER PTHR31956 4 497 3.7E-184 T 26-04-2016 PAM18_RS08455 4f635d430da80f8fea2df737fcac923a 692 PANTHER PTHR31956:SF1 4 497 3.7E-184 T 26-04-2016 PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 Pfam PF13679 Methyltransferase domain 131 236 9.4E-13 T 26-04-2016 IPR025714 Methyltransferase domain PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 SUPERFAMILY SSF53335 124 191 2.69E-6 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 PANTHER PTHR13369:SF1 104 258 2.1E-111 T 26-04-2016 PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 PANTHER PTHR13369:SF1 338 405 2.1E-111 T 26-04-2016 PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 PANTHER PTHR13369 104 258 2.1E-111 T 26-04-2016 PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 PANTHER PTHR13369 338 405 2.1E-111 T 26-04-2016 PAM18_RS26960 f30339d866e3f1552552a8b11e55e783 406 Gene3D G3DSA:3.40.50.150 132 200 5.5E-4 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 PANTHER PTHR11075:SF53 35 197 7.9E-84 T 26-04-2016 PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 SUPERFAMILY SSF75620 3 196 6.02E-43 T 26-04-2016 PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 Gene3D G3DSA:3.30.160.20 106 170 7.4E-25 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 4.5E-98 T 26-04-2016 IPR017509 Putative peptide chain release factor H PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 Pfam PF00472 RF-1 domain 107 185 2.7E-22 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 PANTHER PTHR11075 35 197 7.9E-84 T 26-04-2016 PAM18_RS28580 2d2d026ebd55bb5eb78a865290ef855f 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 Pfam PF02608 Basic membrane protein 36 302 2.0E-52 T 26-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 PANTHER PTHR34296 8 356 2.0E-174 T 26-04-2016 PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 Gene3D G3DSA:3.40.50.2300 32 165 5.5E-43 T 26-04-2016 PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 Gene3D G3DSA:3.40.50.2300 166 248 9.6E-4 T 26-04-2016 PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 SUPERFAMILY SSF53822 174 245 5.18E-5 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS00740 60cdfca1307138fbb9e287b091e5f86e 365 PANTHER PTHR34296:SF1 8 356 2.0E-174 T 26-04-2016 PAM18_RS22000 692f23fbce9f418116d4785f6112dfa4 245 Pfam PF13645 L,D-transpeptidase catalytic domain 44 210 1.0E-63 T 26-04-2016 IPR032676 Putative L,D-transpeptidase catalytic domain PAM18_RS22000 692f23fbce9f418116d4785f6112dfa4 245 PANTHER PTHR38477 4 244 2.4E-93 T 26-04-2016 PAM18_RS22000 692f23fbce9f418116d4785f6112dfa4 245 PANTHER PTHR38477:SF1 4 244 2.4E-93 T 26-04-2016 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 PANTHER PTHR38689:SF1 2 122 6.1E-59 T 26-04-2016 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 113 8.8E-7 T 26-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 PIRSF PIRSF000169 1 122 1.1E-43 T 26-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 120 3.3E-34 T 26-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 PANTHER PTHR38689 2 122 6.1E-59 T 26-04-2016 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 Gene3D G3DSA:1.20.1300.10 1 122 3.0E-36 T 26-04-2016 PAM18_RS17755 c3d38432c869f0bcae47c84e815af0c5 122 SUPERFAMILY SSF81343 4 122 1.33E-27 T 26-04-2016 PAM18_RS17410 8d4080ce9df6a106748a99fbadb9fa2c 297 Pfam PF01758 Sodium Bile acid symporter family 12 194 3.4E-33 T 26-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PAM18_RS17410 8d4080ce9df6a106748a99fbadb9fa2c 297 PANTHER PTHR10361:SF24 1 278 1.7E-166 T 26-04-2016 PAM18_RS17410 8d4080ce9df6a106748a99fbadb9fa2c 297 PANTHER PTHR10361 1 278 1.7E-166 T 26-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 Gene3D G3DSA:1.10.10.10 3 86 5.1E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 SUPERFAMILY SSF46785 4 111 1.75E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.7E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 PANTHER PTHR30537 1 302 3.9E-226 T 26-04-2016 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 PANTHER PTHR30537:SF30 1 302 3.9E-226 T 26-04-2016 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 SUPERFAMILY SSF53850 90 295 1.01E-38 T 26-04-2016 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 Gene3D G3DSA:3.40.190.10 161 261 9.3E-19 T 26-04-2016 PAM18_RS00625 67e9474a14afa43bd884ef472c570443 302 Pfam PF03466 LysR substrate binding domain 88 293 8.7E-41 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS04930 82d75869972856646b8ce6f17db44529 188 Pfam PF02810 SEC-C motif 166 181 1.1E-5 T 26-04-2016 IPR004027 SEC-C motif PAM18_RS04930 82d75869972856646b8ce6f17db44529 188 SUPERFAMILY SSF103642 165 182 2.78E-5 T 26-04-2016 PAM18_RS04930 82d75869972856646b8ce6f17db44529 188 Gene3D G3DSA:3.10.450.50 165 182 7.0E-6 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS25400 c33d48795a98f4289883ee91a729d8f7 425 Pfam PF13719 zinc-ribbon domain 6 41 2.2E-10 T 26-04-2016 IPR011723 Zinc finger/thioredoxin putative PAM18_RS25400 c33d48795a98f4289883ee91a729d8f7 425 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 3.6E-18 T 26-04-2016 IPR011723 Zinc finger/thioredoxin putative PAM18_RS25400 c33d48795a98f4289883ee91a729d8f7 425 Pfam PF11906 Protein of unknown function (DUF3426) 276 421 7.4E-37 T 26-04-2016 IPR021834 Protein of unknown function DUF3426 PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 Gene3D G3DSA:3.60.15.10 16 228 2.0E-33 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 PANTHER PTHR11935:SF109 21 257 3.2E-67 T 26-04-2016 PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 SMART SM00849 21 221 2.0E-26 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 SUPERFAMILY SSF56281 14 269 7.6E-53 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 Pfam PF00753 Metallo-beta-lactamase superfamily 18 221 2.0E-26 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20665 89bf9190cc523f48e3ce8f3728b10e80 301 PANTHER PTHR11935 21 257 3.2E-67 T 26-04-2016 PAM18_RS07440 acec8802a6cc6d28ada1dc41c770b137 493 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 1 493 0.0 T 26-04-2016 PAM18_RS07440 acec8802a6cc6d28ada1dc41c770b137 493 SUPERFAMILY SSF53448 285 362 8.44E-12 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS07440 acec8802a6cc6d28ada1dc41c770b137 493 SUPERFAMILY SSF53448 150 254 8.44E-12 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS07440 acec8802a6cc6d28ada1dc41c770b137 493 Pfam PF13641 Glycosyltransferase like family 2 86 342 1.9E-54 T 26-04-2016 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PANTHER PTHR30483 4 374 5.6E-142 T 26-04-2016 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 Gene3D G3DSA:3.40.50.2300 28 228 1.6E-69 T 26-04-2016 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 Pfam PF13458 Periplasmic binding protein 29 368 5.6E-65 T 26-04-2016 IPR028081 Leucine-binding protein domain PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PANTHER PTHR30483:SF20 4 374 5.6E-142 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 1.1E-23 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 1.1E-23 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 334 349 1.1E-23 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 1.1E-23 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 1.1E-23 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25710 a4fab06ace52f3f354020c741b0d5e45 374 SUPERFAMILY SSF53822 28 371 1.95E-91 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS16405 8bd95490b45fed6fa7901efd8a4a1aee 100 Pfam PF08980 Domain of unknown function (DUF1883) 1 75 1.5E-32 T 26-04-2016 IPR015073 Atu1913-like PAM18_RS16405 8bd95490b45fed6fa7901efd8a4a1aee 100 Gene3D G3DSA:4.10.1210.10 1 92 7.9E-39 T 26-04-2016 IPR015073 Atu1913-like PAM18_RS16405 8bd95490b45fed6fa7901efd8a4a1aee 100 SUPERFAMILY SSF141099 1 96 9.68E-38 T 26-04-2016 IPR015073 Atu1913-like PAM18_RS19705 ef72366235b28e851f319bf53fd2aa3f 55 Pfam PF06796 Periplasmic nitrate reductase protein NapE 2 53 2.1E-24 T 26-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE PAM18_RS19705 ef72366235b28e851f319bf53fd2aa3f 55 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 11 52 1.8E-23 T 26-04-2016 IPR004448 Nitrate reductas, NapE, periplasmic PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 SUPERFAMILY SSF51395 3 357 1.7E-100 T 26-04-2016 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 354 1.9E-70 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 PANTHER PTHR22893 319 359 4.7E-231 T 26-04-2016 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 PANTHER PTHR22893 8 299 4.7E-231 T 26-04-2016 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 PANTHER PTHR22893:SF9 319 359 4.7E-231 T 26-04-2016 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 PANTHER PTHR22893:SF9 8 299 4.7E-231 T 26-04-2016 PAM18_RS21450 0ce0bd4a6cecba83945a04d551719250 370 Gene3D G3DSA:3.20.20.70 3 360 2.0E-106 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS15860 f111b5ed1181faadde3281a996a4e54d 421 Pfam PF13557 Putative MetA-pathway of phenol degradation 267 417 1.6E-5 T 26-04-2016 IPR025737 MetA-pathway of phenol degradation, putative PAM18_RS10135 0265ee7715a479146d7bbc4e015131c4 416 Pfam PF02687 FtsX-like permease family 276 409 3.5E-21 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS10135 0265ee7715a479146d7bbc4e015131c4 416 Pfam PF12704 MacB-like periplasmic core domain 27 231 9.5E-17 T 26-04-2016 IPR025857 MacB-like periplasmic core domain PAM18_RS10135 0265ee7715a479146d7bbc4e015131c4 416 PANTHER PTHR30489 1 416 5.9E-123 T 26-04-2016 PAM18_RS10135 0265ee7715a479146d7bbc4e015131c4 416 PANTHER PTHR30489:SF8 1 416 5.9E-123 T 26-04-2016 PAM18_RS10135 0265ee7715a479146d7bbc4e015131c4 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 1.3E-161 T 26-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 PANTHER PTHR31964:SF42 1 156 1.3E-38 T 26-04-2016 PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 PANTHER PTHR31964 1 156 1.3E-38 T 26-04-2016 PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 SUPERFAMILY SSF52402 1 156 2.93E-26 T 26-04-2016 PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 2 20 7.1E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 134 156 7.1E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 116 128 7.1E-5 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 Gene3D G3DSA:3.40.50.620 1 156 2.0E-28 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS16890 80575ee234200efaddd5d024b43d1167 165 Pfam PF00582 Universal stress protein family 1 156 5.7E-26 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS28465 4f7897261f0f01e2012a90f6f898dc89 381 Gene3D G3DSA:3.40.50.2000 163 344 1.3E-25 T 26-04-2016 PAM18_RS28465 4f7897261f0f01e2012a90f6f898dc89 381 SUPERFAMILY SSF53756 1 368 5.89E-73 T 26-04-2016 PAM18_RS28465 4f7897261f0f01e2012a90f6f898dc89 381 Pfam PF00534 Glycosyl transferases group 1 189 345 2.1E-32 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS28465 4f7897261f0f01e2012a90f6f898dc89 381 Pfam PF13439 Glycosyltransferase Family 4 15 172 1.9E-13 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS28465 4f7897261f0f01e2012a90f6f898dc89 381 PANTHER PTHR12526 1 370 3.0E-60 T 26-04-2016 PAM18_RS24660 39aef20dbda1ae0f7b87cb4da7aa0c7e 354 Gene3D G3DSA:3.40.1570.10 202 335 1.3E-8 T 26-04-2016 PAM18_RS24660 39aef20dbda1ae0f7b87cb4da7aa0c7e 354 Gene3D G3DSA:3.40.1570.10 13 171 7.2E-5 T 26-04-2016 PAM18_RS24660 39aef20dbda1ae0f7b87cb4da7aa0c7e 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 38 167 1.9E-42 T 26-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 PAM18_RS24660 39aef20dbda1ae0f7b87cb4da7aa0c7e 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 220 351 1.5E-42 T 26-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 PAM18_RS24660 39aef20dbda1ae0f7b87cb4da7aa0c7e 354 SUPERFAMILY SSF144064 14 351 1.37E-126 T 26-04-2016 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PANTHER PTHR10992:SF860 4 174 5.7E-124 T 26-04-2016 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PANTHER PTHR10992:SF860 210 311 5.7E-124 T 26-04-2016 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PANTHER PTHR10992 4 174 5.7E-124 T 26-04-2016 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PANTHER PTHR10992 210 311 5.7E-124 T 26-04-2016 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 SUPERFAMILY SSF53474 4 296 8.24E-65 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PIRSF PIRSF006431 1 315 1.2E-135 T 26-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 4.6E-131 T 26-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Gene3D G3DSA:3.40.50.1820 15 305 5.7E-74 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-13 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-13 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.5E-13 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 6.9E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 6.9E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 6.9E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26565 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Pfam PF00561 alpha/beta hydrolase fold 36 296 2.1E-37 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS10375 7859fa708ba4e7a4d9fb063866ba82f8 214 PANTHER PTHR35023 1 214 9.9E-68 T 26-04-2016 PAM18_RS10375 7859fa708ba4e7a4d9fb063866ba82f8 214 Gene3D G3DSA:3.40.50.410 60 170 5.6E-7 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS10375 7859fa708ba4e7a4d9fb063866ba82f8 214 Pfam PF13519 von Willebrand factor type A domain 59 164 3.4E-9 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS10375 7859fa708ba4e7a4d9fb063866ba82f8 214 SUPERFAMILY SSF53300 60 176 4.65E-14 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS10375 7859fa708ba4e7a4d9fb063866ba82f8 214 PANTHER PTHR35023:SF1 1 214 9.9E-68 T 26-04-2016 PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 Gene3D G3DSA:1.20.1250.20 236 433 1.0E-16 T 26-04-2016 PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 PANTHER PTHR11662:SF277 12 440 2.1E-166 T 26-04-2016 PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 Pfam PF07690 Major Facilitator Superfamily 40 396 2.4E-51 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 SUPERFAMILY SSF103473 25 437 2.49E-73 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 Gene3D G3DSA:1.20.1250.20 32 223 1.0E-41 T 26-04-2016 PAM18_RS01195 a036abad58bd44d65c555d40fbdda7fb 440 PANTHER PTHR11662 12 440 2.1E-166 T 26-04-2016 PAM18_RS15090 255a640e24896f6e2bb30eccfa2f77e0 152 SUPERFAMILY SSF102712 5 138 2.48E-14 T 26-04-2016 PAM18_RS15090 255a640e24896f6e2bb30eccfa2f77e0 152 Gene3D G3DSA:3.40.140.10 5 125 2.3E-12 T 26-04-2016 PAM18_RS15090 255a640e24896f6e2bb30eccfa2f77e0 152 Pfam PF14464 Prokaryotic homologs of the JAB domain 8 121 7.3E-18 T 26-04-2016 IPR028090 JAB domain, prokaryotic PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Gene3D G3DSA:1.10.540.10 7 120 1.2E-31 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.8E-29 T 26-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 SUPERFAMILY SSF56645 5 241 4.58E-79 T 26-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 5.3E-40 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 PANTHER PTHR10909 3 377 6.8E-250 T 26-04-2016 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Gene3D G3DSA:2.40.110.10 123 217 2.9E-39 T 26-04-2016 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 3.9E-24 T 26-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 SUPERFAMILY SSF47203 229 377 1.16E-46 T 26-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 Gene3D G3DSA:1.20.140.10 218 377 3.9E-56 T 26-04-2016 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 PANTHER PTHR10909:SF190 3 377 6.8E-250 T 26-04-2016 PAM18_RS19655 a6931c027c2931c07eaf754ad8e41d10 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 26-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 PAM18_RS13255 14e0419acf7eabaec97f156a9db10859 382 Pfam PF03929 PepSY-associated TM region 8 373 4.5E-51 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS13255 14e0419acf7eabaec97f156a9db10859 382 PANTHER PTHR34219 1 377 2.5E-136 T 26-04-2016 PAM18_RS13255 14e0419acf7eabaec97f156a9db10859 382 PANTHER PTHR34219:SF1 1 377 2.5E-136 T 26-04-2016 PAM18_RS06470 526f1b9f5eb060e575df91b016ef7f44 140 SUPERFAMILY SSF82649 6 136 7.32E-43 T 26-04-2016 PAM18_RS06470 526f1b9f5eb060e575df91b016ef7f44 140 Pfam PF02657 Fe-S metabolism associated domain 15 133 2.3E-38 T 26-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 PAM18_RS06470 526f1b9f5eb060e575df91b016ef7f44 140 PANTHER PTHR12735 5 140 1.7E-61 T 26-04-2016 PAM18_RS06470 526f1b9f5eb060e575df91b016ef7f44 140 Gene3D G3DSA:3.90.1010.10 5 137 1.2E-45 T 26-04-2016 PAM18_RS06470 526f1b9f5eb060e575df91b016ef7f44 140 PANTHER PTHR12735:SF26 5 140 1.7E-61 T 26-04-2016 PAM18_RS11415 722c37681123e4c405adbe8a9b303d65 172 Pfam PF00565 Staphylococcal nuclease homologue 61 159 5.7E-7 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS11415 722c37681123e4c405adbe8a9b303d65 172 SMART SM00318 24 160 2.0E-4 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS11415 722c37681123e4c405adbe8a9b303d65 172 Gene3D G3DSA:2.40.50.90 23 163 2.4E-13 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS11415 722c37681123e4c405adbe8a9b303d65 172 SUPERFAMILY SSF50199 24 165 3.01E-16 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS13895 618922e87eb2a5663a95ac49507998a2 310 Gene3D G3DSA:1.10.3720.10 18 298 1.1E-51 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13895 618922e87eb2a5663a95ac49507998a2 310 PANTHER PTHR30193:SF28 1 309 5.4E-160 T 26-04-2016 PAM18_RS13895 618922e87eb2a5663a95ac49507998a2 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 306 8.9E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13895 618922e87eb2a5663a95ac49507998a2 310 SUPERFAMILY SSF161098 70 295 1.7E-48 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS13895 618922e87eb2a5663a95ac49507998a2 310 PANTHER PTHR30193 1 309 5.4E-160 T 26-04-2016 PAM18_RS21795 097852f94367db3e1550b8686897339d 125 Pfam PF16137 Domain of unknown function (DUF4845) 31 116 1.5E-23 T 26-04-2016 IPR032314 Protein of unknown function DUF4845 PAM18_RS22070 01a7cb9269f1672f285fa167a28db2c7 71 SUPERFAMILY SSF46955 21 68 4.39E-5 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 PANTHER PTHR30126 1 309 1.6E-158 T 26-04-2016 PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:3.40.190.10 92 178 8.6E-17 T 26-04-2016 PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF53850 90 298 2.53E-38 T 26-04-2016 PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 Pfam PF03466 LysR substrate binding domain 88 295 3.4E-38 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:3.40.190.10 179 263 1.2E-17 T 26-04-2016 PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:1.10.10.10 3 86 3.3E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF46785 4 86 6.7E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 PANTHER PTHR30126:SF26 1 309 1.6E-158 T 26-04-2016 PAM18_RS05305 bb290e286af74211249a93f90ff6c939 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.7E-20 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 PANTHER PTHR36924:SF1 2 93 8.0E-47 T 26-04-2016 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 SUPERFAMILY SSF47413 10 91 8.3E-23 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 Gene3D G3DSA:1.10.260.40 2 94 5.2E-32 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 SMART SM00530 14 70 4.8E-5 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 PANTHER PTHR36924 2 93 8.0E-47 T 26-04-2016 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 2.9E-32 T 26-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PAM18_RS24455 1ba7fbe9efcc18d969ef8cbdf2b1258f 101 Pfam PF01381 Helix-turn-helix 22 69 5.9E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 SUPERFAMILY SSF52402 20 272 3.45E-77 T 26-04-2016 PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 PANTHER PTHR23090:SF7 1 275 4.0E-145 T 26-04-2016 PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 Pfam PF02540 NAD synthase 28 272 8.1E-65 T 26-04-2016 IPR022310 NAD/GMP synthase PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 27 273 1.0E-67 T 26-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 PANTHER PTHR23090 1 275 4.0E-145 T 26-04-2016 PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 Gene3D G3DSA:3.40.50.620 19 272 5.1E-70 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS25745 e1ef486465ae82017fe70a44f2dab472 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 22 275 32.708 T 26-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 PAM18_RS24815 ed6cb0d3e417c58befec829429760ef5 114 PANTHER PTHR34606 8 111 2.0E-36 T 26-04-2016 PAM18_RS24815 ed6cb0d3e417c58befec829429760ef5 114 Pfam PF04972 BON domain 45 107 2.3E-18 T 26-04-2016 IPR007055 BON domain PAM18_RS24815 ed6cb0d3e417c58befec829429760ef5 114 SMART SM00749 50 113 7.1E-10 T 26-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria PAM18_RS27225 be25ab1ce2b574af451b1fcde443245f 422 Pfam PF01384 Phosphate transporter family 26 409 6.2E-119 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS27225 be25ab1ce2b574af451b1fcde443245f 422 PANTHER PTHR11101 1 420 5.6E-265 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS27225 be25ab1ce2b574af451b1fcde443245f 422 PANTHER PTHR11101:SF63 1 420 5.6E-265 T 26-04-2016 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 Gene3D G3DSA:3.30.1330.120 300 437 6.4E-50 T 26-04-2016 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 8.2E-280 T 26-04-2016 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79|UniPathway: UPA00946 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 PANTHER PTHR16943:SF19 1 494 4.6E-259 T 26-04-2016 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 PANTHER PTHR16943 1 494 4.6E-259 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 Pfam PF03972 MmgE/PrpD family 18 477 9.1E-152 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS21675 f3ace5b8df003e3f54b8756153dd2a3a 494 SUPERFAMILY SSF103378 13 492 1.26E-152 T 26-04-2016 IPR005656 MmgE/PrpD GO:0016829 PAM18_RS01960 70a1fa28caa41e0d91b420cf8c26e550 139 Pfam PF14467 Domain of unknown function (DUF4426) 23 138 2.0E-40 T 26-04-2016 IPR025218 Domain of unknown function DUF4426 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 PANTHER PTHR30465 65 356 3.1E-215 T 26-04-2016 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 PANTHER PTHR30465 1 45 3.1E-215 T 26-04-2016 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 2.5E-36 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 SUPERFAMILY SSF161098 123 339 6.28E-14 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 PANTHER PTHR30465:SF66 65 356 3.1E-215 T 26-04-2016 PAM18_RS16570 951179b12eed382f1c4cf7dd92da0064 360 PANTHER PTHR30465:SF66 1 45 3.1E-215 T 26-04-2016 PAM18_RS07260 fa0d7c7ed66ae7083de53031413b67c5 176 SUPERFAMILY SSF81342 2 172 8.63E-29 T 26-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 PAM18_RS07260 fa0d7c7ed66ae7083de53031413b67c5 176 PANTHER PTHR30529 1 176 1.7E-66 T 26-04-2016 PAM18_RS07260 fa0d7c7ed66ae7083de53031413b67c5 176 PANTHER PTHR30529:SF5 1 176 1.7E-66 T 26-04-2016 PAM18_RS07260 fa0d7c7ed66ae7083de53031413b67c5 176 Gene3D G3DSA:1.20.950.20 3 74 7.0E-4 T 26-04-2016 PAM18_RS07260 fa0d7c7ed66ae7083de53031413b67c5 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 6.0E-27 T 26-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PAM18_RS17560 7921c8f7d345f436a6a368bd55ebedc3 270 Pfam PF12697 Alpha/beta hydrolase family 5 252 1.5E-12 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS17560 7921c8f7d345f436a6a368bd55ebedc3 270 SUPERFAMILY SSF53474 5 258 5.77E-31 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17560 7921c8f7d345f436a6a368bd55ebedc3 270 PANTHER PTHR10992 5 260 1.7E-19 T 26-04-2016 PAM18_RS17560 7921c8f7d345f436a6a368bd55ebedc3 270 Gene3D G3DSA:3.40.50.1820 5 259 3.4E-32 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS12250 76e706461c0600e677ae3e11131ab711 88 Gene3D G3DSA:1.10.1200.10 3 82 1.6E-13 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS12250 76e706461c0600e677ae3e11131ab711 88 SUPERFAMILY SSF47336 3 82 1.7E-10 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PRINTS PR01806 Virulence factor MviN signature 31 50 3.3E-10 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PRINTS PR01806 Virulence factor MviN signature 248 274 3.3E-10 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PRINTS PR01806 Virulence factor MviN signature 50 66 3.3E-10 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PRINTS PR01806 Virulence factor MviN signature 419 436 3.3E-10 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 Pfam PF03023 MviN-like protein 30 442 6.9E-42 T 26-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PANTHER PTHR11206 202 407 1.8E-30 T 26-04-2016 PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PANTHER PTHR11206 64 77 1.8E-30 T 26-04-2016 PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PANTHER PTHR11206:SF90 202 407 1.8E-30 T 26-04-2016 PAM18_RS14380 2f4bd865ffdf6a0e5b35adde2466b368 469 PANTHER PTHR11206:SF90 64 77 1.8E-30 T 26-04-2016 PAM18_RS09965 f5c476add150474db92d5f27f1746d82 128 PANTHER PTHR39176 1 128 4.5E-37 T 26-04-2016 PAM18_RS09965 f5c476add150474db92d5f27f1746d82 128 Pfam PF07007 Protein of unknown function (DUF1311) 37 111 5.0E-14 T 26-04-2016 IPR009739 Protein of unknown function DUF1311 PAM18_RS09965 f5c476add150474db92d5f27f1746d82 128 PANTHER PTHR39176:SF1 1 128 4.5E-37 T 26-04-2016 PAM18_RS13760 82ab2dd21f200e1248d36a36c2dd5558 494 PANTHER PTHR35565:SF3 1 494 0.0 T 26-04-2016 PAM18_RS13760 82ab2dd21f200e1248d36a36c2dd5558 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 489 2.3E-193 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS13760 82ab2dd21f200e1248d36a36c2dd5558 494 PANTHER PTHR35565 1 494 0.0 T 26-04-2016 PAM18_RS13760 82ab2dd21f200e1248d36a36c2dd5558 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 489 1.4E-214 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.0E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.0E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.0E-9 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 SMART SM00421 151 208 4.0E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 SUPERFAMILY SSF46894 145 212 6.46E-15 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 198 3.7E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 Pfam PF08448 PAS fold 28 130 1.0E-6 T 26-04-2016 IPR013656 PAS fold-4 PAM18_RS18210 aa1c7f90d988cc23d5f385a3889c36e6 230 Gene3D G3DSA:1.10.10.10 149 211 8.5E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.0E-27 T 26-04-2016 IPR021131 Ribosomal protein L18e/L15P PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 Gene3D G3DSA:3.100.10.10 32 143 7.1E-22 T 26-04-2016 PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 26-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 PANTHER PTHR12934 1 143 1.5E-64 T 26-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.4E-43 T 26-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 SUPERFAMILY SSF52080 4 142 2.62E-42 T 26-04-2016 IPR021131 Ribosomal protein L18e/L15P PAM18_RS03520 0584c53260dd3c6ac75a1348a178b33a 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 17.557 T 26-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 Pfam PF00375 Sodium:dicarboxylate symporter family 8 410 1.4E-120 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 Gene3D G3DSA:1.10.3860.10 4 414 6.2E-132 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 SUPERFAMILY SSF118215 8 411 6.8E-125 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 26-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 202 221 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 4.2E-53 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PANTHER PTHR11958 1 431 1.8E-257 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 PANTHER PTHR11958:SF26 1 431 1.8E-257 T 26-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 PAM18_RS28625 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 26-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 PAM18_RS17065 8d4e3f7b5ba9b4dbaca47e9c350b3d91 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 2 67 2.6E-23 T 26-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 PAM18_RS17065 8d4e3f7b5ba9b4dbaca47e9c350b3d91 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 2 67 2.9E-20 T 26-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:1.10.300.10 103 196 1.1E-38 T 26-04-2016 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 PANTHER PTHR11846 1 428 5.3E-252 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.90.170.10 267 425 9.0E-67 T 26-04-2016 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 SUPERFAMILY SSF52540 3 429 6.59E-177 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 26-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.40.440.10 3 94 8.5E-71 T 26-04-2016 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.40.440.10 197 266 8.5E-71 T 26-04-2016 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 SMART SM00788 4 424 5.3E-301 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 26-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 218.942 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 3.9E-177 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS25845 f5f59be034a97d07464a676700439a9b 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 6.5E-185 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 PAM18_RS01895 e667c065fcbf385370f4db841f3527ba 335 Pfam PF02687 FtsX-like permease family 211 327 3.7E-8 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS01895 e667c065fcbf385370f4db841f3527ba 335 PIRSF PIRSF003097 37 331 5.1E-64 T 26-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 Gene3D G3DSA:3.60.20.10 131 265 8.5E-87 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 Gene3D G3DSA:3.60.20.10 347 558 8.5E-87 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 Pfam PF01804 Penicillin amidase 3 720 9.9E-145 T 26-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 PANTHER PTHR34218 1 732 0.0 T 26-04-2016 PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 Gene3D G3DSA:2.30.120.10 266 327 1.2E-20 T 26-04-2016 PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 SUPERFAMILY SSF56235 3 726 3.86E-184 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 PANTHER PTHR34218:SF3 1 732 0.0 T 26-04-2016 PAM18_RS13660 da816f0ab12d6b7975b95d266e4f0917 732 Gene3D G3DSA:1.10.439.10 3 130 7.1E-37 T 26-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 PANTHER PTHR21708 1 293 2.2E-76 T 26-04-2016 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 292 7.5E-32 T 26-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:1.10.1040.10 183 292 3.4E-35 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 PANTHER PTHR21708:SF24 1 293 2.2E-76 T 26-04-2016 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF48179 174 293 4.42E-32 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 296 4.4E-86 T 26-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:3.40.50.720 1 182 3.4E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF51735 1 169 3.57E-30 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS22935 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.4E-34 T 26-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 PANTHER PTHR14226:SF34 184 340 2.7E-157 T 26-04-2016 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 PANTHER PTHR14226:SF34 1 166 2.7E-157 T 26-04-2016 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 PANTHER PTHR14226 1 166 2.7E-157 T 26-04-2016 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 PANTHER PTHR14226 184 340 2.7E-157 T 26-04-2016 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 SUPERFAMILY SSF52151 9 251 3.14E-49 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 Gene3D G3DSA:3.40.1090.10 9 226 1.2E-13 T 26-04-2016 PAM18_RS08875 15d817d4291d1907545c4fca942a6c6d 389 Pfam PF01734 Patatin-like phospholipase 14 226 3.1E-23 T 26-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PAM18_RS24805 a4308ea1b967e7db85d908d3f3bbbcf5 104 Pfam PF11006 Protein of unknown function (DUF2845) 25 100 6.2E-22 T 26-04-2016 IPR021268 Protein of unknown function DUF2845 PAM18_RS16070 51c9b6f91bbafb66ddca234a1744f9d0 178 Gene3D G3DSA:3.30.428.10 3 103 1.7E-12 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS16070 51c9b6f91bbafb66ddca234a1744f9d0 178 SUPERFAMILY SSF54197 3 109 2.06E-15 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 PAM18_RS26670 72a13d9f9514473d6cd7554657f41a83 312 Pfam PF00487 Fatty acid desaturase 49 282 7.8E-33 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 PANTHER PTHR23117:SF8 1 184 1.0E-88 T 26-04-2016 PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 178 3.4E-67 T 26-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 179 36.062 T 26-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 PANTHER PTHR23117 1 184 1.0E-88 T 26-04-2016 PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 SUPERFAMILY SSF52540 3 180 3.11E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 Gene3D G3DSA:3.40.50.300 74 149 6.2E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 Gene3D G3DSA:3.40.50.300 2 25 6.2E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08185 71893dbfed8b50ba241ba9121f4f1529 185 SMART SM00072 2 182 5.1E-6 T 26-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PAM18_RS17805 208f763d3dddd8f652949d8b33ac8d40 198 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 29 195 3.0E-93 T 26-04-2016 IPR009706 Protein of unknown function DUF1287 PAM18_RS17805 208f763d3dddd8f652949d8b33ac8d40 198 Pfam PF06940 Domain of unknown function (DUF1287) 34 195 1.2E-66 T 26-04-2016 IPR009706 Protein of unknown function DUF1287 PAM18_RS17805 208f763d3dddd8f652949d8b33ac8d40 198 PIRSF PIRSF011444 3 198 1.5E-90 T 26-04-2016 IPR009706 Protein of unknown function DUF1287 PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 12 95 2.3E-36 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 99 174 1.0E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 PANTHER PTHR38768:SF1 2 221 1.5E-96 T 26-04-2016 PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 95 174 2.68E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 PANTHER PTHR38768 2 221 1.5E-96 T 26-04-2016 PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 Pfam PF04337 Protein of unknown function, DUF480 14 158 3.4E-55 T 26-04-2016 IPR007432 Protein of unknown function DUF480 PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 219 30.28 T 26-04-2016 IPR007432 Protein of unknown function DUF480 PAM18_RS07775 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 13 90 1.34E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS21595 453bfa9a6704899dfc854d53daefa0bd 157 Gene3D G3DSA:3.30.530.20 10 141 7.8E-18 T 26-04-2016 IPR023393 START-like domain PAM18_RS21595 453bfa9a6704899dfc854d53daefa0bd 157 SUPERFAMILY SSF55961 10 139 9.47E-21 T 26-04-2016 PAM18_RS21595 453bfa9a6704899dfc854d53daefa0bd 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 139 2.4E-14 T 26-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PIRSF PIRSF019404 1 147 1.9E-39 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PANTHER PTHR38786 2 147 2.5E-46 T 26-04-2016 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 141 7.2E-33 T 26-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 Pfam PF02050 Flagellar FliJ protein 21 141 1.5E-36 T 26-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 109 127 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 5 27 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 64 85 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 127 147 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 87 108 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS20065 e5f03a0f22a8af30637cb2969475f901 147 PRINTS PR01004 Flagellar FliJ protein signature 45 62 3.6E-13 T 26-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 PANTHER PTHR11777 4 244 8.1E-58 T 26-04-2016 PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 SUPERFAMILY SSF55186 105 243 1.7E-28 T 26-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 Pfam PF01411 tRNA synthetases class II (A) 14 67 8.6E-9 T 26-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 197 240 4.6E-11 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 SUPERFAMILY SSF50447 2 68 1.2E-12 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain PAM18_RS15070 e72fd3f9d7f87dfc27bc662c9a77b118 244 SMART SM00863 197 240 1.4E-12 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 PANTHER PTHR30442 1 721 3.0E-207 T 26-04-2016 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 721 1.7E-96 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 SUPERFAMILY SSF56935 35 721 2.2E-119 T 26-04-2016 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 164 2.9E-21 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 Gene3D G3DSA:2.40.170.20 166 721 6.6E-109 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 Gene3D G3DSA:2.170.130.10 51 165 1.4E-30 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS08720 8396374f5a521d17838da6876fa2fab1 721 Pfam PF00593 TonB dependent receptor 457 718 5.9E-35 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS14800 834c24db4c7cb522e3c2f156245c57e6 245 Gene3D G3DSA:3.60.10.10 6 177 1.2E-13 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS14800 834c24db4c7cb522e3c2f156245c57e6 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 10 236 5.4E-20 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS14800 834c24db4c7cb522e3c2f156245c57e6 245 SUPERFAMILY SSF56219 5 243 4.97E-43 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS14800 834c24db4c7cb522e3c2f156245c57e6 245 PANTHER PTHR15822:SF7 5 244 2.1E-106 T 26-04-2016 PAM18_RS14800 834c24db4c7cb522e3c2f156245c57e6 245 PANTHER PTHR15822 5 244 2.1E-106 T 26-04-2016 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 500 1.0E-121 T 26-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 SUPERFAMILY SSF103473 257 428 9.81E-59 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 SUPERFAMILY SSF103473 11 200 9.81E-59 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 SUPERFAMILY SSF103473 480 505 9.81E-59 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 PANTHER PTHR23501:SF51 14 519 6.0E-298 T 26-04-2016 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 Gene3D G3DSA:1.20.1250.20 482 503 2.7E-15 T 26-04-2016 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 Gene3D G3DSA:1.20.1250.20 13 202 3.1E-22 T 26-04-2016 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 Gene3D G3DSA:1.20.1250.20 271 431 2.7E-15 T 26-04-2016 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 Pfam PF07690 Major Facilitator Superfamily 25 418 1.2E-44 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS09360 77641d21ec5af6093af9cfb39d1a8d00 519 PANTHER PTHR23501 14 519 6.0E-298 T 26-04-2016 PAM18_RS09470 f5cb5f7a8e055ff1bb1316f924a8e89d 253 PANTHER PTHR10108 5 247 2.7E-100 T 26-04-2016 PAM18_RS09470 f5cb5f7a8e055ff1bb1316f924a8e89d 253 Pfam PF08241 Methyltransferase domain 47 143 1.4E-25 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS09470 f5cb5f7a8e055ff1bb1316f924a8e89d 253 PANTHER PTHR10108:SF835 5 247 2.7E-100 T 26-04-2016 PAM18_RS09470 f5cb5f7a8e055ff1bb1316f924a8e89d 253 Gene3D G3DSA:3.40.50.150 34 251 4.2E-49 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS09470 f5cb5f7a8e055ff1bb1316f924a8e89d 253 SUPERFAMILY SSF53335 9 240 1.7E-47 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS03380 82b085c3289986888f34905f67156a75 166 PANTHER PTHR11560 2 164 4.5E-56 T 26-04-2016 PAM18_RS03380 82b085c3289986888f34905f67156a75 166 Pfam PF00466 Ribosomal protein L10 5 101 2.5E-26 T 26-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PAM18_RS03380 82b085c3289986888f34905f67156a75 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 75 154 1.0E-5 T 26-04-2016 PAM18_RS03380 82b085c3289986888f34905f67156a75 166 SUPERFAMILY SSF160369 4 160 2.35E-49 T 26-04-2016 PAM18_RS03380 82b085c3289986888f34905f67156a75 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 26-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03380 82b085c3289986888f34905f67156a75 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.953 T 26-04-2016 IPR022973 Ribosomal protein L10 PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.9E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 6.9E-7 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 SUPERFAMILY SSF51735 8 274 1.65E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 PANTHER PTHR24320:SF45 1 303 2.5E-115 T 26-04-2016 PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 Pfam PF00106 short chain dehydrogenase 16 216 3.7E-24 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 Gene3D G3DSA:3.40.50.720 6 265 6.7E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26320 524c0b3d2e47b61c08c734e964463fb0 309 PANTHER PTHR24320 1 303 2.5E-115 T 26-04-2016 PAM18_RS22690 ebe5f2f352ba7414878cfdc38dd2a3e0 251 PANTHER PTHR37323 1 251 1.5E-101 T 26-04-2016 PAM18_RS22690 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Gene3D G3DSA:3.40.630.30 24 170 3.7E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS22690 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 1.5E-29 T 26-04-2016 PAM18_RS22690 ebe5f2f352ba7414878cfdc38dd2a3e0 251 SUPERFAMILY SSF55729 23 223 3.55E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS22690 ebe5f2f352ba7414878cfdc38dd2a3e0 251 PANTHER PTHR37323:SF1 1 251 1.5E-101 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 Pfam PF05656 Protein of unknown function (DUF805) 175 277 4.6E-21 T 26-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 PANTHER PTHR34980:SF1 164 318 1.7E-104 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 PANTHER PTHR34980:SF1 2 55 1.7E-104 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 Gene3D G3DSA:3.30.700.10 289 353 3.2E-8 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 SUPERFAMILY SSF54523 290 323 2.83E-5 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 PANTHER PTHR34980 164 318 1.7E-104 T 26-04-2016 PAM18_RS03245 c6417d327810ac6108989565d3c1098a 358 PANTHER PTHR34980 2 55 1.7E-104 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 Gene3D G3DSA:2.40.170.20 268 738 1.7E-70 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 Gene3D G3DSA:2.40.170.20 777 883 1.7E-70 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 120 883 2.7E-201 T 26-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 SMART SM00965 67 118 3.3E-5 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 SUPERFAMILY SSF56935 570 729 2.24E-89 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 SUPERFAMILY SSF56935 768 883 2.24E-89 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 SUPERFAMILY SSF56935 130 540 2.24E-89 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552 65 323 0.0 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552 770 883 0.0 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552 344 732 0.0 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 249 5.0E-18 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 126 883 2.7E-249 T 26-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 Gene3D G3DSA:2.170.130.10 139 262 4.1E-38 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 Pfam PF00593 TonB dependent receptor 577 881 7.9E-32 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552:SF20 65 323 0.0 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552:SF20 770 883 0.0 T 26-04-2016 PAM18_RS08005 96ae77ad624d5883f298b33a8196cf63 883 PANTHER PTHR32552:SF20 344 732 0.0 T 26-04-2016 PAM18_RS23385 434a23db4024c3ca012d9bebc98c70b6 263 PIRSF PIRSF012281 1 262 1.2E-130 T 26-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 PAM18_RS23385 434a23db4024c3ca012d9bebc98c70b6 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 248 1.1E-21 T 26-04-2016 IPR019220 Domain of unknown function DUF2135 PAM18_RS15435 954356aef494e6e05be8ea071fec3b86 224 PANTHER PTHR10108:SF835 6 140 6.4E-43 T 26-04-2016 PAM18_RS15435 954356aef494e6e05be8ea071fec3b86 224 SUPERFAMILY SSF53335 7 221 1.66E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15435 954356aef494e6e05be8ea071fec3b86 224 Pfam PF13649 Methyltransferase domain 45 140 4.9E-13 T 26-04-2016 PAM18_RS15435 954356aef494e6e05be8ea071fec3b86 224 Gene3D G3DSA:3.40.50.150 7 220 8.2E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15435 954356aef494e6e05be8ea071fec3b86 224 PANTHER PTHR10108 6 140 6.4E-43 T 26-04-2016 PAM18_RS21375 0fdb84b1df69a48fb4f036188e9e41fc 339 Pfam PF10974 Protein of unknown function (DUF2804) 24 338 2.7E-76 T 26-04-2016 IPR021243 Protein of unknown function DUF2804 PAM18_RS21375 0fdb84b1df69a48fb4f036188e9e41fc 339 PANTHER PTHR35868 2 339 1.2E-130 T 26-04-2016 PAM18_RS21375 0fdb84b1df69a48fb4f036188e9e41fc 339 PANTHER PTHR35868:SF3 2 339 1.2E-130 T 26-04-2016 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 290 2.6E-16 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 Gene3D G3DSA:2.40.50.100 63 97 4.5E-25 T 26-04-2016 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 Gene3D G3DSA:2.40.50.100 172 205 4.5E-25 T 26-04-2016 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 371 1.6E-80 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 SUPERFAMILY SSF111369 53 294 9.94E-71 T 26-04-2016 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 PANTHER PTHR30158:SF2 9 395 6.3E-206 T 26-04-2016 PAM18_RS13120 90ea7d7354fba15cc581da3293765bad 414 PANTHER PTHR30158 9 395 6.3E-206 T 26-04-2016 PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 Gene3D G3DSA:1.20.1250.20 217 398 6.5E-18 T 26-04-2016 PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 Pfam PF07690 Major Facilitator Superfamily 40 357 1.4E-27 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 PANTHER PTHR23523 5 407 1.4E-291 T 26-04-2016 PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 Gene3D G3DSA:1.20.1250.20 22 201 1.6E-14 T 26-04-2016 PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 SUPERFAMILY SSF103473 21 401 1.44E-45 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS13085 134335e4410c96da540a90748a2a0b75 408 PANTHER PTHR23523:SF1 5 407 1.4E-291 T 26-04-2016 PAM18_RS18770 4c3cf4b232d4f35bbe71f9edf81954a5 296 SMART SM00260 146 281 6.1E-22 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18770 4c3cf4b232d4f35bbe71f9edf81954a5 296 PIRSF PIRSF020479 1 296 6.3E-114 T 26-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like PAM18_RS18770 4c3cf4b232d4f35bbe71f9edf81954a5 296 SUPERFAMILY SSF50341 148 282 2.75E-15 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS18770 4c3cf4b232d4f35bbe71f9edf81954a5 296 Pfam PF01584 CheW-like domain 150 281 1.8E-13 T 26-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PAM18_RS10725 df46597db76eba45f3a3b1b1822cd78c 256 SMART SM00880 11 253 5.9E-41 T 26-04-2016 IPR007899 CHAD domain PAM18_RS10725 df46597db76eba45f3a3b1b1822cd78c 256 Pfam PF05235 CHAD domain 23 214 1.4E-27 T 26-04-2016 IPR007899 CHAD domain PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 SUPERFAMILY SSF52540 10 226 4.35E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 PANTHER PTHR24220 13 397 5.0E-181 T 26-04-2016 PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 Pfam PF00005 ABC transporter 28 173 2.5E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 Pfam PF00005 ABC transporter 280 436 6.5E-6 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 Gene3D G3DSA:3.40.50.300 259 487 1.2E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 Gene3D G3DSA:3.40.50.300 10 231 1.0E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 SUPERFAMILY SSF52540 259 487 2.35E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 PANTHER PTHR24220:SF239 13 397 5.0E-181 T 26-04-2016 PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS00690 51f03ae419edd1d7c5cb9ac89b1d1c58 523 SMART SM00382 36 220 2.3E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS10685 3fdfa9bc9e087988d2e585802ff83331 171 PANTHER PTHR42641 1 171 1.4E-113 T 26-04-2016 PAM18_RS10685 3fdfa9bc9e087988d2e585802ff83331 171 PANTHER PTHR42641:SF2 1 171 1.4E-113 T 26-04-2016 PAM18_RS10685 3fdfa9bc9e087988d2e585802ff83331 171 Pfam PF05232 Chlorhexidine efflux transporter 93 156 1.1E-23 T 26-04-2016 IPR007896 Chlorhexidine efflux transporter PAM18_RS10685 3fdfa9bc9e087988d2e585802ff83331 171 Pfam PF05232 Chlorhexidine efflux transporter 25 88 1.1E-24 T 26-04-2016 IPR007896 Chlorhexidine efflux transporter PAM18_RS20355 da1d35e4cf272d78f085bc10d57d0136 89 PANTHER PTHR34702:SF1 1 89 1.4E-22 T 26-04-2016 PAM18_RS20355 da1d35e4cf272d78f085bc10d57d0136 89 PIRSF PIRSF028784 1 89 2.0E-28 T 26-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PAM18_RS20355 da1d35e4cf272d78f085bc10d57d0136 89 PANTHER PTHR34702 1 89 1.4E-22 T 26-04-2016 PAM18_RS20355 da1d35e4cf272d78f085bc10d57d0136 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 1.1E-21 T 26-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 SMART SM01003 4 136 1.6E-68 T 26-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 Gene3D G3DSA:3.40.50.720 168 200 4.8E-5 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 Gene3D G3DSA:3.40.50.1770 2 167 9.6E-58 T 26-04-2016 PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 SMART SM01002 145 314 7.9E-85 T 26-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 369 1.8E-73 T 26-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 SUPERFAMILY SSF52283 2 167 5.36E-51 T 26-04-2016 PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 8.3E-43 T 26-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 SUPERFAMILY SSF51735 136 317 2.69E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 PANTHER PTHR10160 2 370 9.1E-176 T 26-04-2016 PAM18_RS00985 193b1cde9b6eb6286e917e1607f60178 372 Gene3D G3DSA:3.40.50.1770 201 367 9.3E-39 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 269 395 3.4E-27 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 SMART SM00382 265 398 4.4E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 PANTHER PTHR23077:SF75 201 492 2.9E-133 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 PANTHER PTHR23077:SF75 102 114 2.9E-133 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 Gene3D G3DSA:1.10.8.60 405 459 2.4E-8 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 Gene3D G3DSA:3.40.50.300 232 404 2.1E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 SUPERFAMILY SSF52540 234 448 9.46E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 PANTHER PTHR23077 201 492 2.9E-133 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 PANTHER PTHR23077 102 114 2.9E-133 T 26-04-2016 PAM18_RS03235 77249e96229bfecc8fa7abea25fe6bb8 493 SUPERFAMILY SSF52540 41 214 1.4E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 Pfam PF00675 Insulinase (Peptidase family M16) 41 179 6.8E-21 T 26-04-2016 IPR011765 Peptidase M16, N-terminal PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 Pfam PF05193 Peptidase M16 inactive domain 195 378 3.3E-28 T 26-04-2016 IPR007863 Peptidase M16, C-terminal PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 Gene3D G3DSA:3.30.830.10 28 248 3.3E-58 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 PANTHER PTHR11851 30 437 1.1E-103 T 26-04-2016 PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 SUPERFAMILY SSF63411 255 450 3.67E-34 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 PANTHER PTHR11851:SF136 30 437 1.1E-103 T 26-04-2016 PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 Gene3D G3DSA:3.30.830.10 268 443 4.2E-27 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 PAM18_RS01880 53c4d53e2aba2a9c78d38fb3409de816 456 SUPERFAMILY SSF63411 28 245 7.83E-61 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 SMART SM00342 248 331 3.8E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 PANTHER PTHR11019 76 339 3.4E-75 T 26-04-2016 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 PANTHER PTHR11019 32 51 3.4E-75 T 26-04-2016 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 Pfam PF12833 Helix-turn-helix domain 254 329 1.9E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 Gene3D G3DSA:1.10.10.60 285 329 1.3E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 Gene3D G3DSA:3.40.50.880 29 215 2.6E-32 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 SUPERFAMILY SSF46689 232 282 1.16E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 SUPERFAMILY SSF46689 284 330 2.51E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 PANTHER PTHR11019:SF90 76 339 3.4E-75 T 26-04-2016 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 PANTHER PTHR11019:SF90 32 51 3.4E-75 T 26-04-2016 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 SUPERFAMILY SSF52317 29 214 4.01E-36 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 Gene3D G3DSA:1.10.10.60 228 284 4.2E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS03850 fe2fc7d0d61a9d7cd7804a7b2026b3b9 340 Pfam PF01965 DJ-1/PfpI family 44 197 1.8E-17 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 SUPERFAMILY SSF52540 25 211 1.39E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 Pfam PF00005 ABC transporter 25 175 9.4E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 PANTHER PTHR24220 3 221 4.6E-73 T 26-04-2016 PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 Gene3D G3DSA:3.40.50.300 22 212 2.0E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 SMART SM00382 29 224 4.6E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS00375 def47d83b76330af74c8df86bfcf170e 238 PANTHER PTHR24220:SF430 3 221 4.6E-73 T 26-04-2016 PAM18_RS01715 ae9ccc4ae63f18c6ecea1ab93637eb4b 267 PANTHER PTHR30269 1 267 2.2E-122 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS01715 ae9ccc4ae63f18c6ecea1ab93637eb4b 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 6.8E-57 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS01715 ae9ccc4ae63f18c6ecea1ab93637eb4b 267 PANTHER PTHR30269:SF18 1 267 2.2E-122 T 26-04-2016 PAM18_RS21605 fe0fc79cf6a059b9fe25a81424e548f3 131 PANTHER PTHR36974 1 131 3.1E-43 T 26-04-2016 PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 PANTHER PTHR12526:SF363 1 397 1.4E-124 T 26-04-2016 PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 PANTHER PTHR12526 1 397 1.4E-124 T 26-04-2016 PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 Gene3D G3DSA:3.40.50.2000 179 356 1.2E-23 T 26-04-2016 PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 Pfam PF13692 Glycosyl transferases group 1 208 343 1.0E-22 T 26-04-2016 PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 Pfam PF13439 Glycosyltransferase Family 4 18 183 8.8E-28 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS21440 6ad761fe3f9cc17d9869352945d9b5f3 406 SUPERFAMILY SSF53756 7 378 1.62E-75 T 26-04-2016 PAM18_RS07100 cd81e375f7b752d0b95476db74618325 238 PANTHER PTHR21392 1 237 7.1E-132 T 26-04-2016 PAM18_RS07100 cd81e375f7b752d0b95476db74618325 238 PANTHER PTHR21392:SF1 1 237 7.1E-132 T 26-04-2016 PAM18_RS07100 cd81e375f7b752d0b95476db74618325 238 SMART SM01144 26 219 4.0E-74 T 26-04-2016 IPR005636 DTW PAM18_RS07100 cd81e375f7b752d0b95476db74618325 238 Pfam PF03942 DTW domain 28 214 9.1E-43 T 26-04-2016 IPR005636 DTW PAM18_RS11240 c6f76e8b8c59dd8892375d4f2f550a50 145 Pfam PF12158 Protein of unknown function (DUF3592) 9 133 1.1E-16 T 26-04-2016 IPR021994 Protein of unknown function DUF3592 PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 7.8E-64 T 26-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 PANTHER PTHR11603:SF148 1 325 2.0E-156 T 26-04-2016 PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 Gene3D G3DSA:3.40.50.300 26 190 5.8E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 PIRSF PIRSF002849 1 326 1.3E-128 T 26-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 PANTHER PTHR11603 1 325 2.0E-156 T 26-04-2016 PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 SUPERFAMILY SSF52540 10 298 2.66E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS09730 4b460720d4c06239c2b9d7bf11d10b55 326 Gene3D G3DSA:1.10.8.300 208 322 1.3E-41 T 26-04-2016 PAM18_RS01190 c06b44e8a94dc50e14d4c0b455bfeaa4 416 PANTHER PTHR34596 2 416 1.4E-167 T 26-04-2016 PAM18_RS01190 c06b44e8a94dc50e14d4c0b455bfeaa4 416 Pfam PF03573 outer membrane porin, OprD family 26 414 4.6E-151 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS01190 c06b44e8a94dc50e14d4c0b455bfeaa4 416 Gene3D G3DSA:2.40.160.10 31 416 1.0E-140 T 26-04-2016 IPR023614 Porin domain PAM18_RS23725 6f28ddce648fd0d0d10ef4e5977732fc 169 SUPERFAMILY SSF54523 10 142 8.63E-16 T 26-04-2016 PAM18_RS23725 6f28ddce648fd0d0d10ef4e5977732fc 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 2.6E-4 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23725 6f28ddce648fd0d0d10ef4e5977732fc 169 Pfam PF12019 Type II transport protein GspH 47 148 2.8E-14 T 26-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PAM18_RS17890 ec31775e5d1cf902f3e41bef1b171559 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 5 45 3.3E-9 T 26-04-2016 IPR008621 Cbb3-type cytochrome oxidase component PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 SMART SM00382 29 238 9.6E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 PANTHER PTHR24220:SF408 6 265 1.6E-133 T 26-04-2016 PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 1.2E-90 T 26-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 Gene3D G3DSA:3.40.50.300 2 243 6.5E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 Pfam PF00005 ABC transporter 21 181 6.6E-33 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 PANTHER PTHR24220 6 265 1.6E-133 T 26-04-2016 PAM18_RS08130 f82272a2c3e4523eb0811a44e8988082 278 SUPERFAMILY SSF52540 4 242 1.66E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS00200 eac88d662b1264200b563951cb8459e8 73 Pfam PF06649 Protein of unknown function (DUF1161) 23 72 2.9E-24 T 26-04-2016 IPR010595 Protein of unknown function DUF1161 PAM18_RS00200 eac88d662b1264200b563951cb8459e8 73 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 73 2.0E-35 T 26-04-2016 IPR010595 Protein of unknown function DUF1161 PAM18_RS05880 a9a7ce5712639ed07c781759b785df5f 164 PANTHER PTHR35011 1 164 1.2E-45 T 26-04-2016 PAM18_RS05880 a9a7ce5712639ed07c781759b785df5f 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 145 4.0E-24 T 26-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PAM18_RS05880 a9a7ce5712639ed07c781759b785df5f 164 PANTHER PTHR35011:SF2 1 164 1.2E-45 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 SUPERFAMILY SSF101386 147 245 1.6E-26 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 Gene3D G3DSA:1.10.287.1080 18 71 2.6E-6 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 Gene3D G3DSA:1.10.287.1080 145 229 8.0E-15 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 SUPERFAMILY SSF101386 2 104 1.96E-23 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 PANTHER PTHR30522 1 273 3.4E-125 T 26-04-2016 PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 PANTHER PTHR30522:SF0 1 273 3.4E-125 T 26-04-2016 IPR011551 NTP pyrophosphohydrolase MazG PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 4.1E-26 T 26-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 180 236 4.6E-10 T 26-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PAM18_RS20950 f0a93eb3391d9f746581e842d79244f6 276 TIGRFAM TIGR00444 mazG: MazG family protein 10 267 3.9E-97 T 26-04-2016 IPR011551 NTP pyrophosphohydrolase MazG PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 Gene3D G3DSA:1.10.287.460 20 96 2.3E-9 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 PANTHER PTHR10516 23 71 1.2E-25 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 PANTHER PTHR10516 92 206 1.2E-25 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 SUPERFAMILY SSF54534 22 208 3.93E-37 T 26-04-2016 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 109 1.2E-5 T 26-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 PANTHER PTHR10516:SF320 23 71 1.2E-25 T 26-04-2016 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 PANTHER PTHR10516:SF320 92 206 1.2E-25 T 26-04-2016 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 127 206 3.1E-18 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS27465 bb7aa2146ba547ddfb52fa082a41a253 209 Gene3D G3DSA:3.10.50.40 97 208 3.4E-32 T 26-04-2016 PAM18_RS28075 63f41b237f993ff435f964faffe0973c 134 PANTHER PTHR11049:SF5 3 134 3.1E-64 T 26-04-2016 PAM18_RS28075 63f41b237f993ff435f964faffe0973c 134 PANTHER PTHR11049 3 134 3.1E-64 T 26-04-2016 PAM18_RS28075 63f41b237f993ff435f964faffe0973c 134 Gene3D G3DSA:3.10.129.10 7 131 1.4E-32 T 26-04-2016 IPR029069 HotDog domain PAM18_RS28075 63f41b237f993ff435f964faffe0973c 134 Pfam PF03061 Thioesterase superfamily 29 103 3.6E-16 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS28075 63f41b237f993ff435f964faffe0973c 134 SUPERFAMILY SSF54637 9 131 3.58E-32 T 26-04-2016 IPR029069 HotDog domain PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293 248 305 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293 177 210 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293 1 157 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 305 56.959 T 26-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 Gene3D G3DSA:3.40.50.620 247 256 2.6E-64 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 Gene3D G3DSA:3.40.50.620 5 209 2.6E-64 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293:SF6 248 305 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293:SF6 177 210 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PANTHER PTHR23293:SF6 1 157 7.3E-97 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 SUPERFAMILY SSF52402 5 209 1.65E-77 T 26-04-2016 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 260 2.2E-67 T 26-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 PIRSF PIRSF002936 1 305 1.3E-155 T 26-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PAM18_RS23165 8d49de4ffc9ce6e1db406f1dd145acdb 305 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 305 3.7E-159 T 26-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 138 3.7E-47 T 26-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 SUPERFAMILY SSF52540 29 128 6.27E-25 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 PANTHER PTHR33540 3 151 2.2E-51 T 26-04-2016 PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 Gene3D G3DSA:3.40.50.300 6 151 4.6E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 PANTHER PTHR33540:SF2 3 151 2.2E-51 T 26-04-2016 PAM18_RS25895 f3f1fa3907e7e1c6119c4c44a142e773 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 130 2.2E-39 T 26-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PAM18_RS07595 637ac4a0dfef8fd23939b3c24d5b4992 344 PANTHER PTHR30578:SF0 3 340 3.2E-151 T 26-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PAM18_RS07595 637ac4a0dfef8fd23939b3c24d5b4992 344 PANTHER PTHR30578 3 340 3.2E-151 T 26-04-2016 PAM18_RS07595 637ac4a0dfef8fd23939b3c24d5b4992 344 Pfam PF03116 NQR2, RnfD, RnfE family 7 332 2.1E-102 T 26-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PAM18_RS07595 637ac4a0dfef8fd23939b3c24d5b4992 344 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 333 2.6E-139 T 26-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PAM18_RS07595 637ac4a0dfef8fd23939b3c24d5b4992 344 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 334 26.736 T 26-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 SUPERFAMILY SSF48452 270 365 4.67E-17 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 SUPERFAMILY SSF48452 92 187 4.67E-17 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 5 393 4.5E-107 T 26-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 Gene3D G3DSA:1.25.40.10 331 395 2.5E-21 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 Gene3D G3DSA:1.25.40.10 272 299 2.5E-21 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 Gene3D G3DSA:1.25.40.10 90 204 2.5E-21 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27480 d7767246f2d4092882126088e289e552 412 Pfam PF07219 HemY protein N-terminus 27 131 6.7E-26 T 26-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 PAM18_RS14375 09a174a1117bf26b73377be8cb055481 355 Pfam PF01757 Acyltransferase family 7 322 2.8E-26 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PAM18_RS14375 09a174a1117bf26b73377be8cb055481 355 PANTHER PTHR37312 1 160 7.3E-94 T 26-04-2016 PAM18_RS14375 09a174a1117bf26b73377be8cb055481 355 PANTHER PTHR37312 179 348 7.3E-94 T 26-04-2016 PAM18_RS06325 76fa3ddb33517a56549782d01c98fc13 431 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 412 3.9E-131 T 26-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA PAM18_RS06325 76fa3ddb33517a56549782d01c98fc13 431 SMART SM01154 41 419 8.4E-183 T 26-04-2016 IPR012548 Protein of unknown function DUF1704 PAM18_RS06325 76fa3ddb33517a56549782d01c98fc13 431 Pfam PF08014 Domain of unknown function (DUF1704) 42 416 2.0E-131 T 26-04-2016 IPR012548 Protein of unknown function DUF1704 PAM18_RS25960 e8ede7a7fd9e366310fe98526b7d2db2 508 Pfam PF10144 Bacterial virulence factor haemolysin 31 158 7.5E-8 T 26-04-2016 IPR019305 Uncharacterised protein family Smp PAM18_RS15150 59ea96f1576223f4f9add4e5f0a25e70 359 Pfam PF00296 Luciferase-like monooxygenase 37 330 3.6E-50 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS15150 59ea96f1576223f4f9add4e5f0a25e70 359 Gene3D G3DSA:3.20.20.30 30 357 2.1E-62 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS15150 59ea96f1576223f4f9add4e5f0a25e70 359 PANTHER PTHR30011:SF29 6 357 1.8E-153 T 26-04-2016 PAM18_RS15150 59ea96f1576223f4f9add4e5f0a25e70 359 SUPERFAMILY SSF51679 30 352 9.94E-58 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS15150 59ea96f1576223f4f9add4e5f0a25e70 359 PANTHER PTHR30011 6 357 1.8E-153 T 26-04-2016 PAM18_RS15680 c67cf0b011300bf1aa9638258f84ceb7 304 Gene3D G3DSA:3.60.15.10 1 304 1.9E-122 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS15680 c67cf0b011300bf1aa9638258f84ceb7 304 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 304 3.0E-146 T 26-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 PAM18_RS15680 c67cf0b011300bf1aa9638258f84ceb7 304 Pfam PF12706 Beta-lactamase superfamily domain 50 271 7.6E-49 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS15680 c67cf0b011300bf1aa9638258f84ceb7 304 SUPERFAMILY SSF56281 1 304 6.38E-68 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS15680 c67cf0b011300bf1aa9638258f84ceb7 304 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 304 177.943 T 26-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 Gene3D G3DSA:2.60.120.330 2 324 1.2E-96 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PANTHER PTHR10209:SF144 122 331 3.6E-145 T 26-04-2016 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PANTHER PTHR10209:SF144 1 106 3.6E-145 T 26-04-2016 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PANTHER PTHR10209 122 331 3.6E-145 T 26-04-2016 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PANTHER PTHR10209 1 106 3.6E-145 T 26-04-2016 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 181 276 2.7E-23 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PRINTS PR00682 Isopenicillin N synthase signature 236 262 5.7E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PRINTS PR00682 Isopenicillin N synthase signature 201 222 5.7E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 PRINTS PR00682 Isopenicillin N synthase signature 29 46 5.7E-14 T 26-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 SUPERFAMILY SSF51197 4 290 1.72E-89 T 26-04-2016 PAM18_RS03815 dc793f79fc85783fed4bd85135724be8 334 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 6 129 1.9E-31 T 26-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain PAM18_RS02400 09eb535c641be6a492342779b8c7721e 133 PANTHER PTHR21660 1 132 8.2E-22 T 26-04-2016 PAM18_RS02400 09eb535c641be6a492342779b8c7721e 133 Gene3D G3DSA:3.10.129.10 2 132 3.9E-45 T 26-04-2016 IPR029069 HotDog domain PAM18_RS02400 09eb535c641be6a492342779b8c7721e 133 SUPERFAMILY SSF54637 4 131 3.74E-29 T 26-04-2016 IPR029069 HotDog domain PAM18_RS02400 09eb535c641be6a492342779b8c7721e 133 Pfam PF03061 Thioesterase superfamily 47 123 4.8E-16 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 PANTHER PTHR10108 7 169 2.2E-40 T 26-04-2016 PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 PANTHER PTHR10108 195 204 2.2E-40 T 26-04-2016 PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 Gene3D G3DSA:3.40.50.150 12 265 3.9E-25 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 Pfam PF13649 Methyltransferase domain 49 155 3.5E-9 T 26-04-2016 PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 PANTHER PTHR10108:SF820 7 169 2.2E-40 T 26-04-2016 PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 PANTHER PTHR10108:SF820 195 204 2.2E-40 T 26-04-2016 PAM18_RS15985 1ffc6dd159d7f7a70569e8e11a24c333 269 SUPERFAMILY SSF53335 9 202 2.28E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16985 d74fdba5a81892ad9cbd3eb054777fdd 273 Pfam PF00034 Cytochrome c 181 264 6.1E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS16985 d74fdba5a81892ad9cbd3eb054777fdd 273 SUPERFAMILY SSF46626 163 269 1.27E-19 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS16985 d74fdba5a81892ad9cbd3eb054777fdd 273 Gene3D G3DSA:1.10.760.10 178 269 2.9E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Gene3D G3DSA:3.10.180.10 437 628 1.3E-43 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 PANTHER PTHR12110 1 275 5.1E-92 T 26-04-2016 PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 2.7E-37 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Gene3D G3DSA:3.10.180.10 287 431 2.8E-37 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Gene3D G3DSA:3.20.20.150 1 264 6.5E-78 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 PANTHER PTHR12110:SF14 1 275 5.1E-92 T 26-04-2016 PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 SUPERFAMILY SSF51658 1 269 5.94E-76 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 294 426 1.5E-37 T 26-04-2016 PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 441 565 6.5E-9 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS01200 b75e2f23108c6bd26673e43907107179 634 SUPERFAMILY SSF54593 292 621 2.64E-65 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS06670 e843327d16de10b1e8dddfe84326d54e 283 Gene3D G3DSA:3.40.50.1820 5 281 8.9E-83 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS06670 e843327d16de10b1e8dddfe84326d54e 283 Pfam PF00756 Putative esterase 25 275 4.7E-63 T 26-04-2016 IPR000801 Putative esterase PAM18_RS06670 e843327d16de10b1e8dddfe84326d54e 283 PANTHER PTHR10061 4 283 3.5E-181 T 26-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 PAM18_RS06670 e843327d16de10b1e8dddfe84326d54e 283 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 280 7.3E-127 T 26-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 PAM18_RS06670 e843327d16de10b1e8dddfe84326d54e 283 SUPERFAMILY SSF53474 5 282 8.9E-94 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS14685 119c7e323b73ae859671c8555e035f53 202 Pfam PF06930 Protein of unknown function (DUF1282) 8 177 2.6E-21 T 26-04-2016 IPR009698 Protein of unknown function DUF1282 PAM18_RS02410 5355ad72783f10355a5c3d423e40cdda 515 PANTHER PTHR30618 1 497 0.0 T 26-04-2016 PAM18_RS02410 5355ad72783f10355a5c3d423e40cdda 515 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 49 470 2.9E-79 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS02410 5355ad72783f10355a5c3d423e40cdda 515 PANTHER PTHR30618:SF6 1 497 0.0 T 26-04-2016 PAM18_RS04585 5d10ce16a747f8632dd41310dddab3b6 600 Pfam PF09822 ABC-type uncharacterized transport system 34 291 3.2E-62 T 26-04-2016 IPR019196 ABC-type uncharacterised transport system PAM18_RS19510 1b66128a8dc124a99d024f4d9ba7d883 248 PANTHER PTHR10108:SF730 2 170 3.5E-20 T 26-04-2016 PAM18_RS19510 1b66128a8dc124a99d024f4d9ba7d883 248 PANTHER PTHR10108 2 170 3.5E-20 T 26-04-2016 PAM18_RS19510 1b66128a8dc124a99d024f4d9ba7d883 248 SUPERFAMILY SSF53335 3 158 1.15E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19510 1b66128a8dc124a99d024f4d9ba7d883 248 Gene3D G3DSA:3.40.50.150 2 167 2.8E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19510 1b66128a8dc124a99d024f4d9ba7d883 248 Pfam PF13649 Methyltransferase domain 39 124 3.1E-13 T 26-04-2016 PAM18_RS16980 ae939ccde6b9b2fa955444aa7c084380 295 PANTHER PTHR36838:SF2 1 293 2.9E-168 T 26-04-2016 PAM18_RS16980 ae939ccde6b9b2fa955444aa7c084380 295 PANTHER PTHR36838 1 293 2.9E-168 T 26-04-2016 PAM18_RS16980 ae939ccde6b9b2fa955444aa7c084380 295 Pfam PF03547 Membrane transport protein 134 285 2.4E-14 T 26-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 SMART SM00382 26 216 3.0E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 Pfam PF00005 ABC transporter 18 160 1.1E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 Gene3D G3DSA:3.40.50.300 1 231 7.6E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 PANTHER PTHR24220:SF193 3 237 1.0E-96 T 26-04-2016 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 PANTHER PTHR24220:SF193 254 304 1.0E-96 T 26-04-2016 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 PANTHER PTHR24220 3 237 1.0E-96 T 26-04-2016 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 PANTHER PTHR24220 254 304 1.0E-96 T 26-04-2016 PAM18_RS06450 2bc5fbfee0309c05cb918dfd3c88b132 307 SUPERFAMILY SSF52540 2 232 1.52E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF00905 Penicillin binding protein transpeptidase domain 242 538 4.8E-80 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.40.710.10 224 542 2.0E-81 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 PANTHER PTHR30627:SF1 1 557 1.4E-212 T 26-04-2016 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.90.1310.10 125 223 7.2E-24 T 26-04-2016 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 PANTHER PTHR30627 1 557 1.4E-212 T 26-04-2016 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 201 1.0E-11 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56519 49 216 2.09E-37 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PAM18_RS14225 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56601 217 545 1.31E-87 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 55 1.5E-6 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 245 348 4.4E-17 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 PANTHER PTHR32182:SF13 1 373 3.4E-127 T 26-04-2016 PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 SUPERFAMILY SSF52540 224 350 1.44E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 SUPERFAMILY SSF52540 1 100 1.44E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 PIRSF PIRSF029347 1 387 3.2E-169 T 26-04-2016 IPR014555 RecF-like PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 PANTHER PTHR32182 1 373 3.4E-127 T 26-04-2016 PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 Gene3D G3DSA:3.40.50.300 1 60 1.1E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21705 35fc239add10a7a8a030bc258051d981 387 Gene3D G3DSA:3.40.50.300 275 352 2.4E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 270 7.6E-53 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 PANTHER PTHR11941:SF89 4 269 2.5E-203 T 26-04-2016 PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 113 133 - T 26-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 PANTHER PTHR11941 4 269 2.5E-203 T 26-04-2016 PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 Gene3D G3DSA:3.90.226.10 18 213 8.1E-65 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 Gene3D G3DSA:1.10.12.10 214 271 3.7E-15 T 26-04-2016 IPR014748 Crontonase, C-terminal PAM18_RS21920 a1ef6ac19b1bff8428a18e4191c28d1e 272 SUPERFAMILY SSF52096 18 271 1.4E-78 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 PANTHER PTHR32234 1 586 2.7E-218 T 26-04-2016 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 PANTHER PTHR32234:SF0 1 586 2.7E-218 T 26-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 177 355 2.2E-10 T 26-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Pfam PF11412 Disulphide bond corrector protein DsbC 32 138 8.3E-31 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 584 38.608 T 26-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Pfam PF13899 Thioredoxin-like 476 547 1.4E-12 T 26-04-2016 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 SUPERFAMILY SSF52833 480 578 5.48E-20 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 SUPERFAMILY SSF74863 31 141 9.68E-35 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 ProSitePatterns PS00194 Thioredoxin family active site. 492 510 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Gene3D G3DSA:2.60.40.1250 30 141 2.0E-38 T 26-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAM18_RS13190 f52e1dab2a7fe23f0b66890d84dfe2b4 587 Gene3D G3DSA:3.40.30.10 476 584 1.2E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 Gene3D G3DSA:3.40.50.620 1 129 8.7E-30 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 Gene3D G3DSA:3.40.50.620 133 284 1.2E-27 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 SUPERFAMILY SSF52402 139 284 3.43E-25 T 26-04-2016 PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 SUPERFAMILY SSF52402 1 129 7.37E-31 T 26-04-2016 PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 Pfam PF00582 Universal stress protein family 1 129 1.4E-31 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 Pfam PF00582 Universal stress protein family 139 282 5.4E-23 T 26-04-2016 IPR006016 UspA GO:0006950 PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 PRINTS PR01438 Universal stress protein signature 110 132 4.7E-12 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 PRINTS PR01438 Universal stress protein signature 92 104 4.7E-12 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 PRINTS PR01438 Universal stress protein signature 1 18 4.7E-12 T 26-04-2016 IPR006015 Universal stress protein A PAM18_RS22700 17825e315b10e74abb66477bbeee6a56 286 PANTHER PTHR31964 1 129 2.1E-25 T 26-04-2016 PAM18_RS06905 3e13376ebfc2a8c74d93b3df65dfea1b 407 Pfam PF04860 Phage portal protein 52 377 1.7E-95 T 26-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein PAM18_RS06905 3e13376ebfc2a8c74d93b3df65dfea1b 407 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 42 383 2.4E-77 T 26-04-2016 IPR006427 Phage portal protein, HK97 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 SMART SM00382 366 550 1.3E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 PANTHER PTHR24220 338 546 1.0E-107 T 26-04-2016 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 SUPERFAMILY SSF90123 10 312 6.15E-33 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 Gene3D G3DSA:1.20.1560.10 10 311 3.3E-27 T 26-04-2016 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 Gene3D G3DSA:3.40.50.300 336 549 4.7E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 Pfam PF00005 ABC transporter 359 493 4.4E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 PANTHER PTHR24220:SF425 338 546 1.0E-107 T 26-04-2016 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 SUPERFAMILY SSF52540 336 547 6.27E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 6 548 5.8E-222 T 26-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 PAM18_RS13600 089e152eda92e006b8c2f8ec232ca2f2 550 Pfam PF00664 ABC transporter transmembrane region 34 174 6.8E-9 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PAM18_RS14040 fe4de2ac014d02ede396b424edff1cc6 340 SUPERFAMILY SSF53850 35 271 2.72E-30 T 26-04-2016 PAM18_RS14040 fe4de2ac014d02ede396b424edff1cc6 340 PANTHER PTHR30024 1 333 4.2E-197 T 26-04-2016 PAM18_RS14040 fe4de2ac014d02ede396b424edff1cc6 340 Pfam PF13379 NMT1-like family 33 273 1.1E-23 T 26-04-2016 PAM18_RS14040 fe4de2ac014d02ede396b424edff1cc6 340 PANTHER PTHR30024:SF2 1 333 4.2E-197 T 26-04-2016 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PIRSF PIRSF006648 4 260 6.2E-15 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PANTHER PTHR30413 16 267 6.1E-126 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 Pfam PF01061 ABC-2 type transporter 17 228 2.1E-31 T 26-04-2016 IPR013525 ABC-2 type transporter GO:0016020 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PANTHER PTHR30413:SF9 16 267 6.1E-126 T 26-04-2016 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 5.3E-8 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 37 58 5.3E-8 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS11795 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 205 224 5.3E-8 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 SUPERFAMILY SSF103481 181 282 5.1E-18 T 26-04-2016 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 PANTHER PTHR22911 1 298 8.0E-59 T 26-04-2016 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 Pfam PF00892 EamA-like transporter family 147 277 2.5E-21 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 Pfam PF00892 EamA-like transporter family 12 135 1.1E-11 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 PANTHER PTHR22911:SF23 1 298 8.0E-59 T 26-04-2016 PAM18_RS08970 96469b5bf7e8645067870a53d3b53a3b 299 SUPERFAMILY SSF103481 38 136 3.79E-9 T 26-04-2016 PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 Pfam PF03797 Autotransporter beta-domain 369 632 1.8E-49 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SUPERFAMILY SSF52266 302 330 2.17E-15 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SUPERFAMILY SSF52266 111 121 2.17E-15 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SUPERFAMILY SSF52266 148 265 2.17E-15 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SUPERFAMILY SSF52266 30 67 2.17E-15 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 Gene3D G3DSA:2.40.128.130 342 646 2.4E-68 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 Gene3D G3DSA:3.40.50.1110 19 336 9.4E-66 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 - T 26-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 PANTHER PTHR22835:SF222 1 457 7.1E-103 T 26-04-2016 PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SUPERFAMILY SSF103515 349 646 2.09E-46 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 325 2.5E-13 T 26-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 PANTHER PTHR22835 1 457 7.1E-103 T 26-04-2016 PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 PIRSF PIRSF037375 2 646 5.5E-218 T 26-04-2016 IPR017186 Lipase, autotransporter EstA PAM18_RS26720 6ee49fb4abc00135248b6524bc1b7320 646 SMART SM00869 370 636 2.0E-35 T 26-04-2016 IPR005546 Autotransporter beta-domain PAM18_RS08315 7a28c329edb76ede37550490455628e2 101 PANTHER PTHR33495 14 100 6.0E-12 T 26-04-2016 PAM18_RS08315 7a28c329edb76ede37550490455628e2 101 Pfam PF13466 STAS domain 16 94 2.2E-14 T 26-04-2016 IPR002645 STAS domain PAM18_RS08315 7a28c329edb76ede37550490455628e2 101 SUPERFAMILY SSF52091 10 100 1.08E-21 T 26-04-2016 IPR002645 STAS domain PAM18_RS08315 7a28c329edb76ede37550490455628e2 101 Gene3D G3DSA:3.30.750.24 12 100 4.4E-21 T 26-04-2016 IPR002645 STAS domain PAM18_RS13980 e39b14b53d42cbd94daaba3050875b43 450 Pfam PF02447 GntP family permease 10 449 3.0E-184 T 26-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PAM18_RS13980 e39b14b53d42cbd94daaba3050875b43 450 PANTHER PTHR30354:SF1 5 450 4.8E-247 T 26-04-2016 PAM18_RS13980 e39b14b53d42cbd94daaba3050875b43 450 PANTHER PTHR30354 5 450 4.8E-247 T 26-04-2016 PAM18_RS13980 e39b14b53d42cbd94daaba3050875b43 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 450 3.7E-162 T 26-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PAM18_RS13980 e39b14b53d42cbd94daaba3050875b43 450 PIRSF PIRSF002746 5 450 3.1E-161 T 26-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 Gene3D G3DSA:2.70.40.10 3 187 3.3E-70 T 26-04-2016 IPR029054 dUTPase-like PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 PANTHER PTHR11241:SF1 1 187 1.9E-80 T 26-04-2016 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.976 T 26-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 PANTHER PTHR11241 1 187 1.9E-80 T 26-04-2016 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 2.4E-51 T 26-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 Pfam PF00692 dUTPase 76 184 8.9E-9 T 26-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 PAM18_RS07640 6ddb749ed148fefdad374cff3a595247 188 SUPERFAMILY SSF51283 3 187 1.83E-53 T 26-04-2016 IPR029054 dUTPase-like PAM18_RS03160 d5952d70811faba0a27a1dec29e52890 231 Pfam PF05100 Phage minor tail protein L 24 228 6.3E-96 T 26-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail PAM18_RS03160 d5952d70811faba0a27a1dec29e52890 231 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 7 226 5.4E-76 T 26-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail PAM18_RS10935 69894c56ebedd7fba05ab72fb404f348 375 SUPERFAMILY SSF53187 107 373 8.13E-53 T 26-04-2016 PAM18_RS10935 69894c56ebedd7fba05ab72fb404f348 375 PANTHER PTHR12756:SF18 1 294 1.2E-188 T 26-04-2016 PAM18_RS10935 69894c56ebedd7fba05ab72fb404f348 375 Gene3D G3DSA:3.40.630.10 99 343 3.0E-35 T 26-04-2016 PAM18_RS10935 69894c56ebedd7fba05ab72fb404f348 375 Pfam PF00246 Zinc carboxypeptidase 134 339 3.2E-18 T 26-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 PAM18_RS10935 69894c56ebedd7fba05ab72fb404f348 375 PANTHER PTHR12756 1 294 1.2E-188 T 26-04-2016 PAM18_RS17145 e9eb9eceae99b993e4ae984d276be535 109 PIRSF PIRSF017117 1 109 6.9E-42 T 26-04-2016 IPR016684 Type III secretion system chaperone, YscY PAM18_RS17145 e9eb9eceae99b993e4ae984d276be535 109 Gene3D G3DSA:1.25.40.10 3 106 8.7E-11 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS17145 e9eb9eceae99b993e4ae984d276be535 109 SUPERFAMILY SSF48452 2 109 2.37E-12 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 PANTHER PTHR12526 81 366 4.8E-53 T 26-04-2016 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 Pfam PF00534 Glycosyl transferases group 1 185 335 3.2E-29 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 PANTHER PTHR12526:SF397 81 366 4.8E-53 T 26-04-2016 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 SUPERFAMILY SSF53756 8 365 2.09E-62 T 26-04-2016 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 Gene3D G3DSA:3.40.50.2000 162 345 1.8E-29 T 26-04-2016 PAM18_RS26185 f1096630b698d8c1a874be03c5a9669a 378 Pfam PF13439 Glycosyltransferase Family 4 41 172 3.5E-9 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PAM18_RS02740 c0047c0cea17c48d9458016f4fc2ff0b 152 SUPERFAMILY SSF47175 23 150 5.89E-33 T 26-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PAM18_RS02740 c0047c0cea17c48d9458016f4fc2ff0b 152 PIRSF PIRSF000027 7 152 9.7E-47 T 26-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 PAM18_RS02740 c0047c0cea17c48d9458016f4fc2ff0b 152 Pfam PF01322 Cytochrome C' 30 150 6.6E-32 T 26-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 PAM18_RS02740 c0047c0cea17c48d9458016f4fc2ff0b 152 Gene3D G3DSA:1.20.120.10 22 151 5.7E-36 T 26-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 PANTHER PTHR32552:SF14 63 129 0.0 T 26-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 PANTHER PTHR32552:SF14 154 804 0.0 T 26-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 Gene3D G3DSA:2.40.170.20 279 804 1.8E-108 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 162 260 2.3E-16 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 Pfam PF00593 TonB dependent receptor 571 802 1.2E-24 T 26-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 PANTHER PTHR32552 63 129 0.0 T 26-04-2016 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 PANTHER PTHR32552 154 804 0.0 T 26-04-2016 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 164 804 2.7E-111 T 26-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 Gene3D G3DSA:2.170.130.10 157 276 6.7E-27 T 26-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 SMART SM00965 65 116 2.8E-14 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 Pfam PF07660 Secretin and TonB N terminus short domain 65 115 3.3E-7 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 787 804 - T 26-04-2016 IPR010917 TonB-dependent receptor, conserved site PAM18_RS16045 7a0d10c5f32a36b0a41a2dd4a2e0308d 804 SUPERFAMILY SSF56935 157 804 1.6E-110 T 26-04-2016 PAM18_RS03965 6dcf77f1799386032a2d623fa299b810 343 Gene3D G3DSA:1.10.3470.10 18 342 6.1E-85 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS03965 6dcf77f1799386032a2d623fa299b810 343 SUPERFAMILY SSF81345 12 339 4.32E-67 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS03965 6dcf77f1799386032a2d623fa299b810 343 PANTHER PTHR30472:SF24 2 342 1.0E-168 T 26-04-2016 PAM18_RS03965 6dcf77f1799386032a2d623fa299b810 343 Pfam PF01032 FecCD transport family 33 339 3.9E-77 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS03965 6dcf77f1799386032a2d623fa299b810 343 PANTHER PTHR30472 2 342 1.0E-168 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PANTHER PTHR30035:SF2 2 267 2.6E-160 T 26-04-2016 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PRINTS PR01805 VacJ lipoprotein signature 174 191 9.6E-25 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PRINTS PR01805 VacJ lipoprotein signature 87 103 9.6E-25 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PRINTS PR01805 VacJ lipoprotein signature 70 83 9.6E-25 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PRINTS PR01805 VacJ lipoprotein signature 138 155 9.6E-25 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 PANTHER PTHR30035 2 267 2.6E-160 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS08885 d8555fa9663d3f082c0b7a22c249068e 267 Pfam PF04333 MlaA lipoprotein 69 262 1.9E-67 T 26-04-2016 IPR007428 MlaA lipoprotein GO:0016020 PAM18_RS18880 f0cbb80e673bb5fc7ed6db3d35654981 427 PANTHER PTHR37533 1 427 3.3E-117 T 26-04-2016 PAM18_RS18880 f0cbb80e673bb5fc7ed6db3d35654981 427 Pfam PF02120 Flagellar hook-length control protein FliK 295 372 6.6E-23 T 26-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PAM18_RS18880 f0cbb80e673bb5fc7ed6db3d35654981 427 PANTHER PTHR37533:SF2 1 427 3.3E-117 T 26-04-2016 PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 PANTHER PTHR23515:SF2 1 422 4.6E-114 T 26-04-2016 PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 Pfam PF07690 Major Facilitator Superfamily 17 368 9.2E-43 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 SUPERFAMILY SSF103473 5 412 4.19E-65 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 Gene3D G3DSA:1.20.1250.20 213 411 4.8E-22 T 26-04-2016 PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 Gene3D G3DSA:1.20.1250.20 9 190 1.4E-28 T 26-04-2016 PAM18_RS05405 17dd19809e082cd70ea3709b5daa1fd4 431 PANTHER PTHR23515 1 422 4.6E-114 T 26-04-2016 PAM18_RS22575 7cdfaee0994c0a0696a88a70353a238a 268 Pfam PF13174 Tetratricopeptide repeat 94 128 0.0021 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS22575 7cdfaee0994c0a0696a88a70353a238a 268 Gene3D G3DSA:1.25.40.10 190 241 4.4E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS22575 7cdfaee0994c0a0696a88a70353a238a 268 Gene3D G3DSA:1.25.40.10 93 144 4.4E-8 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS22575 7cdfaee0994c0a0696a88a70353a238a 268 SUPERFAMILY SSF81901 91 144 9.94E-6 T 26-04-2016 PAM18_RS22575 7cdfaee0994c0a0696a88a70353a238a 268 SUPERFAMILY SSF81901 186 241 9.94E-6 T 26-04-2016 PAM18_RS22720 fa33003cd96a8acebeaa6a9e92dd1b91 350 Gene3D G3DSA:3.20.20.70 1 349 4.5E-131 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS22720 fa33003cd96a8acebeaa6a9e92dd1b91 350 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 6.2E-85 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS22720 fa33003cd96a8acebeaa6a9e92dd1b91 350 PANTHER PTHR22893 1 349 6.9E-171 T 26-04-2016 PAM18_RS22720 fa33003cd96a8acebeaa6a9e92dd1b91 350 SUPERFAMILY SSF51395 1 349 4.64E-122 T 26-04-2016 PAM18_RS22720 fa33003cd96a8acebeaa6a9e92dd1b91 350 PANTHER PTHR22893:SF14 1 349 6.9E-171 T 26-04-2016 PAM18_RS04635 92837a08d3c6f81630442e675a989dbc 221 PANTHER PTHR30353 1 219 1.8E-94 T 26-04-2016 IPR032818 DedA family PAM18_RS04635 92837a08d3c6f81630442e675a989dbc 221 Pfam PF09335 SNARE associated Golgi protein 47 172 3.0E-25 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS04635 92837a08d3c6f81630442e675a989dbc 221 PANTHER PTHR30353:SF0 1 219 1.8E-94 T 26-04-2016 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PANTHER PTHR12277 22 275 4.5E-48 T 26-04-2016 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 2.3E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 2.3E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 2.3E-7 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 SUPERFAMILY SSF53474 26 276 1.44E-42 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 Pfam PF12146 Serine aminopeptidase, S33 67 171 1.9E-15 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 98 109 3.0E-6 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 142 156 3.0E-6 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 71 79 3.0E-6 T 26-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PAM18_RS06335 4cbb6e0bb9412ad904f1d68619e2cdc0 301 Gene3D G3DSA:3.40.50.1820 41 275 1.4E-41 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 Gene3D G3DSA:2.160.10.10 10 182 1.1E-36 T 26-04-2016 PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 SUPERFAMILY SSF51161 8 139 1.52E-31 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.9E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.5E-4 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 PANTHER PTHR13061 5 179 1.0E-63 T 26-04-2016 PAM18_RS28935 5e8120becc8d6b3be41c5f59cbe08a4f 186 PANTHER PTHR13061:SF8 5 179 1.0E-63 T 26-04-2016 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 100 1.5E-6 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 SUPERFAMILY SSF46626 25 103 2.22E-20 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 92 102 4.9E-29 T 26-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 81 91 4.9E-29 T 26-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 43 56 4.9E-29 T 26-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 28 41 4.9E-29 T 26-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 66 79 4.9E-29 T 26-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 PAM18_RS02620 0c22eb0a87ea5a6e9f8fc615a0473325 104 Gene3D G3DSA:1.10.760.10 24 104 5.0E-33 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS06765 92ebc895c7e8e00e00600420497c2043 178 Pfam PF14359 Domain of unknown function (DUF4406) 5 95 1.6E-29 T 26-04-2016 IPR025518 Protein of unknown function DUF4406 PAM18_RS06765 92ebc895c7e8e00e00600420497c2043 178 Gene3D G3DSA:3.40.50.10400 1 99 2.2E-7 T 26-04-2016 IPR027269 Hypothetical PA1492 domain PAM18_RS06765 92ebc895c7e8e00e00600420497c2043 178 SUPERFAMILY SSF52309 1 98 9.16E-22 T 26-04-2016 PAM18_RS26700 48d9560c22e92146cd41baf711d5f199 85 Pfam PF04355 SmpA / OmlA family 22 47 6.0E-6 T 26-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PAM18_RS02885 c8c97408108a399dd23bbee84b8159b5 204 Pfam PF14300 Domain of unknown function (DUF4375) 73 194 2.5E-26 T 26-04-2016 IPR025402 Domain of unknown function DUF4375 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 PANTHER PTHR33866:SF2 4 159 3.3E-88 T 26-04-2016 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 13 123 4.0E-45 T 26-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 11 127 31.184 T 26-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 Gene3D G3DSA:3.60.90.10 12 126 1.5E-40 T 26-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 PANTHER PTHR33866 4 159 3.3E-88 T 26-04-2016 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 SUPERFAMILY SSF56276 13 124 3.26E-38 T 26-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS24995 64d0785a7c80488b736c0952be6a73d2 160 Pfam PF02675 S-adenosylmethionine decarboxylase 18 123 3.0E-34 T 26-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 PANTHER PTHR10632:SF8 1 395 1.2E-171 T 26-04-2016 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 137 1.1E-7 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 PANTHER PTHR10632 1 395 1.2E-171 T 26-04-2016 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 SUPERFAMILY SSF51905 119 261 1.01E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 Gene3D G3DSA:3.50.50.60 1 121 5.8E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 Gene3D G3DSA:3.50.50.60 262 331 5.8E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS12740 73a1cea46acacaf1540ea6ce617c9c0b 395 SUPERFAMILY SSF51905 2 149 1.83E-21 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 Gene3D G3DSA:3.10.350.10 97 144 2.0E-9 T 26-04-2016 IPR018392 LysM domain PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 SMART SM00257 95 144 5.6E-10 T 26-04-2016 IPR018392 LysM domain PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 SUPERFAMILY SSF54106 94 144 9.16E-7 T 26-04-2016 IPR018392 LysM domain PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 PANTHER PTHR34700 1 145 1.8E-39 T 26-04-2016 PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF01476 LysM domain 97 144 9.1E-10 T 26-04-2016 IPR018392 LysM domain PAM18_RS27075 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF04972 BON domain 22 87 7.1E-13 T 26-04-2016 IPR007055 BON domain PAM18_RS01020 95da3f361c07ecbd5d07f340cbc0582f 193 SUPERFAMILY SSF53474 8 180 4.2E-37 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01020 95da3f361c07ecbd5d07f340cbc0582f 193 Gene3D G3DSA:3.40.50.1820 5 180 3.5E-48 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS01020 95da3f361c07ecbd5d07f340cbc0582f 193 Pfam PF06821 Serine hydrolase 8 178 6.7E-69 T 26-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 PANTHER PTHR11079 1 104 1.3E-20 T 26-04-2016 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 PIRSF PIRSF016821 8 133 5.6E-38 T 26-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 PANTHER PTHR11079:SF70 1 104 1.3E-20 T 26-04-2016 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 Gene3D G3DSA:3.10.290.10 9 105 3.9E-34 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 Pfam PF01479 S4 domain 11 56 1.4E-9 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 SUPERFAMILY SSF55174 10 105 8.93E-26 T 26-04-2016 PAM18_RS27165 b161819814bfacd90ffffd7a75cfb95d 133 SMART SM00363 11 74 5.9E-6 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 PAM18_RS11225 f5bba4e982fc3ff77cb8122e79f077c1 318 PANTHER PTHR30520:SF2 56 315 4.8E-172 T 26-04-2016 PAM18_RS11225 f5bba4e982fc3ff77cb8122e79f077c1 318 Pfam PF01226 Formate/nitrite transporter 78 310 1.1E-42 T 26-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 PAM18_RS11225 f5bba4e982fc3ff77cb8122e79f077c1 318 Gene3D G3DSA:1.20.1080.10 88 315 4.2E-47 T 26-04-2016 IPR023271 Aquaporin-like PAM18_RS11225 f5bba4e982fc3ff77cb8122e79f077c1 318 PANTHER PTHR30520 56 315 4.8E-172 T 26-04-2016 PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 4.9E-106 T 26-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 Pfam PF00005 ABC transporter 17 161 1.6E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 PANTHER PTHR24220:SF404 3 232 5.1E-141 T 26-04-2016 PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 Gene3D G3DSA:3.40.50.300 1 221 2.1E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 SUPERFAMILY SSF52540 2 221 2.55E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 PANTHER PTHR24220 3 232 5.1E-141 T 26-04-2016 PAM18_RS25455 93d173b30f99ad26cfe2f812f3f985b6 232 SMART SM00382 26 211 1.4E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS03135 b0e333c8e47add9ec2a09e8eb822d847 164 Pfam PF16460 Phage tail tube, TTP, lambda-like 25 161 7.8E-84 T 26-04-2016 IPR032495 Phage tail tube protein, lambda-like PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SMART SM00450 40 136 5.7E-14 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SUPERFAMILY SSF52821 16 139 3.27E-29 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 PANTHER PTHR12231 43 139 1.7E-37 T 26-04-2016 PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Pfam PF00581 Rhodanese-like domain 43 131 4.5E-11 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Gene3D G3DSA:3.40.250.10 39 138 7.5E-25 T 26-04-2016 IPR001763 Rhodanese-like domain PAM18_RS26810 50f19f1d45ff6f34da6e2ba3ca9318b7 139 PANTHER PTHR12231:SF138 43 139 1.7E-37 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SMART SM00062 44 269 1.1E-30 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Pfam PF01464 Transglycosylase SLT domain 295 402 5.3E-20 T 26-04-2016 IPR008258 Transglycosylase SLT domain 1 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 312 340 - T 26-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:3.40.190.10 21 165 4.7E-22 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53955 435 453 9.68E-33 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53955 246 400 9.68E-33 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 PANTHER PTHR21666:SF215 274 488 5.3E-134 T 26-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:1.10.530.10 252 397 1.1E-38 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:1.10.530.10 432 453 1.1E-38 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53850 45 268 1.59E-37 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 PANTHER PTHR21666 274 488 5.3E-134 T 26-04-2016 PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 268 9.5E-27 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS05985 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 6 489 45.366 T 26-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 PAM18_RS08840 962398ce11584333e346477e9afadc28 185 Pfam PF13302 Acetyltransferase (GNAT) domain 21 152 2.1E-18 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS08840 962398ce11584333e346477e9afadc28 185 Gene3D G3DSA:3.40.630.30 11 182 5.2E-42 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08840 962398ce11584333e346477e9afadc28 185 PANTHER PTHR13256:SF43 11 180 2.2E-50 T 26-04-2016 PAM18_RS08840 962398ce11584333e346477e9afadc28 185 PANTHER PTHR13256 11 180 2.2E-50 T 26-04-2016 PAM18_RS08840 962398ce11584333e346477e9afadc28 185 SUPERFAMILY SSF55729 11 176 1.48E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PANTHER PTHR13789 1 402 9.6E-158 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PANTHER PTHR13789:SF5 1 402 9.6E-158 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 26-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 Pfam PF01494 FAD binding domain 4 345 1.3E-23 T 26-04-2016 IPR002938 FAD-binding domain GO:0071949 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 Gene3D G3DSA:3.50.50.60 3 182 3.6E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 Gene3D G3DSA:3.50.50.60 272 360 3.6E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 SUPERFAMILY SSF51905 280 399 3.35E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 SUPERFAMILY SSF51905 1 177 3.35E-57 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.4E-17 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.4E-17 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.4E-17 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.4E-17 T 26-04-2016 PAM18_RS27295 81651bd27aef0c800051637ec14e3b9b 405 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 394 5.1E-136 T 26-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 Gene3D G3DSA:3.60.15.10 45 274 2.6E-32 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 PANTHER PTHR23200 1 288 3.5E-153 T 26-04-2016 PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 SMART SM00849 54 272 1.3E-27 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 Pfam PF00753 Metallo-beta-lactamase superfamily 51 272 1.6E-27 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 SUPERFAMILY SSF56281 48 276 7.21E-34 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS09880 82f76790d11faebc10502124b11e0c99 288 PANTHER PTHR23200:SF45 1 288 3.5E-153 T 26-04-2016 PAM18_RS16190 507b335de04ca5c3e6bf9b1010eecac4 107 PANTHER PTHR30561:SF0 1 106 2.7E-51 T 26-04-2016 PAM18_RS16190 507b335de04ca5c3e6bf9b1010eecac4 107 PANTHER PTHR30561 1 106 2.7E-51 T 26-04-2016 PAM18_RS16190 507b335de04ca5c3e6bf9b1010eecac4 107 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.3E-29 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS16190 507b335de04ca5c3e6bf9b1010eecac4 107 SUPERFAMILY SSF103481 4 104 2.48E-22 T 26-04-2016 PAM18_RS00510 c61d49dfc8b6de85592b1780272bb123 306 SUPERFAMILY SSF63829 114 288 1.83E-5 T 26-04-2016 PAM18_RS25125 b16c49595593af596d1a0d519dd5112d 192 SUPERFAMILY SSF52540 11 114 1.26E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25125 b16c49595593af596d1a0d519dd5112d 192 Gene3D G3DSA:3.40.50.300 11 136 6.8E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25125 b16c49595593af596d1a0d519dd5112d 192 PANTHER PTHR37816:SF1 12 192 7.3E-53 T 26-04-2016 PAM18_RS25125 b16c49595593af596d1a0d519dd5112d 192 Pfam PF13671 AAA domain 14 59 3.3E-6 T 26-04-2016 PAM18_RS25125 b16c49595593af596d1a0d519dd5112d 192 PANTHER PTHR37816 12 192 7.3E-53 T 26-04-2016 PAM18_RS22175 eb1e66b5c8de0f3f64596cc8b22e696e 568 Gene3D G3DSA:2.40.160.20 276 353 2.2E-5 T 26-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 PAM18_RS22175 eb1e66b5c8de0f3f64596cc8b22e696e 568 Pfam PF16930 Putative porin 32 568 7.3E-228 T 26-04-2016 IPR032638 Putative bacterial porin PAM18_RS22175 eb1e66b5c8de0f3f64596cc8b22e696e 568 SUPERFAMILY SSF56935 409 568 3.48E-12 T 26-04-2016 PAM18_RS22175 eb1e66b5c8de0f3f64596cc8b22e696e 568 SUPERFAMILY SSF56935 187 361 3.48E-12 T 26-04-2016 PAM18_RS22175 eb1e66b5c8de0f3f64596cc8b22e696e 568 SUPERFAMILY SSF56935 128 150 3.48E-12 T 26-04-2016 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 PANTHER PTHR21535 70 332 7.8E-40 T 26-04-2016 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 144 254 2.0E-13 T 26-04-2016 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 256 332 8.6E-22 T 26-04-2016 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF143865 9 260 2.88E-49 T 26-04-2016 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 Pfam PF01544 CorA-like Mg2+ transporter protein 41 328 1.2E-62 T 26-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PAM18_RS16785 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF144083 267 329 5.75E-16 T 26-04-2016 PAM18_RS17085 851c11852941481cda6b3bbf332e0203 276 Pfam PF16806 Antiactivator protein ExsD 42 274 6.3E-101 T 26-04-2016 IPR031835 Antiactivator protein ExsD PAM18_RS18720 8b3ed37caf3884421b495fd1c170b6f5 526 Pfam PF02120 Flagellar hook-length control protein FliK 432 512 4.6E-19 T 26-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 PANTHER PTHR24220 7 277 4.2E-104 T 26-04-2016 PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 PANTHER PTHR24220:SF10 7 277 4.2E-104 T 26-04-2016 PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 SMART SM00382 34 217 1.2E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 Gene3D G3DSA:3.40.50.300 2 215 2.1E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 Pfam PF00005 ABC transporter 27 167 1.4E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS13945 cb92a6dd3c0ac75003d339611f8c00b9 278 SUPERFAMILY SSF52540 9 238 1.82E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS01855 ec0c21d7f1c9a05a6a841c68bb670351 136 Pfam PF13508 Acetyltransferase (GNAT) domain 48 119 1.2E-6 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS01855 ec0c21d7f1c9a05a6a841c68bb670351 136 SUPERFAMILY SSF55729 12 119 5.32E-16 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS01855 ec0c21d7f1c9a05a6a841c68bb670351 136 Gene3D G3DSA:3.40.630.30 12 124 2.7E-16 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS13290 73f488fcbf2e77ba6fa6c39626bf0d33 73 PANTHER PTHR37011 2 73 1.0E-36 T 26-04-2016 PAM18_RS13290 73f488fcbf2e77ba6fa6c39626bf0d33 73 Gene3D G3DSA:2.30.30.100 21 73 8.5E-19 T 26-04-2016 PAM18_RS13290 73f488fcbf2e77ba6fa6c39626bf0d33 73 SUPERFAMILY SSF50182 22 72 2.62E-14 T 26-04-2016 IPR010920 LSM domain PAM18_RS13290 73f488fcbf2e77ba6fa6c39626bf0d33 73 PANTHER PTHR37011:SF1 2 73 1.0E-36 T 26-04-2016 PAM18_RS13290 73f488fcbf2e77ba6fa6c39626bf0d33 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 9.3E-19 T 26-04-2016 IPR010305 Protein of unknown function DUF903 PAM18_RS27355 8e98dc022c2d4c117a5d9ec34fde1290 139 PANTHER PTHR35091 6 138 5.7E-52 T 26-04-2016 PAM18_RS27355 8e98dc022c2d4c117a5d9ec34fde1290 139 PANTHER PTHR35091:SF1 6 138 5.7E-52 T 26-04-2016 PAM18_RS27355 8e98dc022c2d4c117a5d9ec34fde1290 139 Pfam PF03748 Flagellar basal body-associated protein FliL 37 138 2.9E-21 T 26-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 PANTHER PTHR30108:SF2 77 204 9.5E-87 T 26-04-2016 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 PANTHER PTHR30108:SF2 1 60 9.5E-87 T 26-04-2016 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 Gene3D G3DSA:3.40.50.1950 6 203 3.4E-75 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 Pfam PF02441 Flavoprotein 6 144 7.6E-27 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 200 9.3E-62 T 26-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 PANTHER PTHR30108 77 204 9.5E-87 T 26-04-2016 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 PANTHER PTHR30108 1 60 9.5E-87 T 26-04-2016 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 36.238 T 26-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 PAM18_RS04685 0e2d91198d8b979fb56724d27aa5180e 209 SUPERFAMILY SSF52507 6 202 1.7E-59 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 PAM18_RS26570 b15cdaa089873c05ab01301cb1fabc6a 158 SUPERFAMILY SSF55811 5 133 8.53E-20 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS26570 b15cdaa089873c05ab01301cb1fabc6a 158 Pfam PF00293 NUDIX domain 9 127 2.2E-11 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS26570 b15cdaa089873c05ab01301cb1fabc6a 158 PANTHER PTHR22769 6 141 1.4E-14 T 26-04-2016 PAM18_RS26570 b15cdaa089873c05ab01301cb1fabc6a 158 Gene3D G3DSA:3.90.79.10 6 134 4.4E-24 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 Pfam PF13145 PPIC-type PPIASE domain 271 391 2.5E-7 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 Gene3D G3DSA:3.10.50.40 285 401 5.8E-11 T 26-04-2016 PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 SUPERFAMILY SSF109998 267 320 3.45E-5 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 SUPERFAMILY SSF109998 69 160 3.45E-5 T 26-04-2016 IPR027304 Trigger factor/SurA domain PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 PANTHER PTHR10657 195 427 1.8E-18 T 26-04-2016 PAM18_RS00135 f199a4dd2f108e9daee096c67f88b8bc 428 SUPERFAMILY SSF54534 292 383 6.54E-11 T 26-04-2016 PAM18_RS18875 2c1fc2fc5d678c0f2c9aeccffb71a57e 173 PANTHER PTHR35091:SF1 4 173 7.9E-83 T 26-04-2016 PAM18_RS18875 2c1fc2fc5d678c0f2c9aeccffb71a57e 173 Pfam PF03748 Flagellar basal body-associated protein FliL 75 173 1.2E-23 T 26-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PAM18_RS18875 2c1fc2fc5d678c0f2c9aeccffb71a57e 173 PANTHER PTHR35091 4 173 7.9E-83 T 26-04-2016 PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 Pfam PF03929 PepSY-associated TM region 16 410 1.4E-59 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 PANTHER PTHR34219:SF2 6 225 7.1E-231 T 26-04-2016 PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 PANTHER PTHR34219:SF2 266 462 7.1E-231 T 26-04-2016 PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 PANTHER PTHR34219 6 225 7.1E-231 T 26-04-2016 PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 PANTHER PTHR34219 266 462 7.1E-231 T 26-04-2016 PAM18_RS05830 d615dd450a35ff48d6071217192c290a 471 Pfam PF03413 Peptidase propeptide and YPEB domain 299 355 7.7E-4 T 26-04-2016 IPR025711 PepSY domain PAM18_RS03895 e35445cb27bde5b2ebb8bc056aaf4961 462 Gene3D G3DSA:2.40.10.10 255 380 1.7E-38 T 26-04-2016 PAM18_RS03895 e35445cb27bde5b2ebb8bc056aaf4961 462 SUPERFAMILY SSF50494 222 459 2.71E-34 T 26-04-2016 IPR009003 Peptidase S1, PA clan PAM18_RS27590 47a1853ded0fde3717333bebeb6f30e3 233 PANTHER PTHR38765 1 233 2.9E-91 T 26-04-2016 PAM18_RS27590 47a1853ded0fde3717333bebeb6f30e3 233 Pfam PF04340 Protein of unknown function, DUF484 8 227 1.5E-87 T 26-04-2016 IPR007435 Protein of unknown function DUF484 PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 SUPERFAMILY SSF50331 254 327 1.28E-8 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 SUPERFAMILY SSF52540 4 241 4.37E-87 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 Pfam PF00005 ABC transporter 20 161 1.1E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 Gene3D G3DSA:3.40.50.300 4 238 4.9E-84 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 PANTHER PTHR24220 5 243 6.0E-123 T 26-04-2016 PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 SMART SM00382 28 211 1.7E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 Pfam PF08402 TOBE domain 257 327 2.1E-8 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 PAM18_RS08810 5a4cbba79107d65bf73f2e808bb522b8 331 PANTHER PTHR24220:SF150 5 243 6.0E-123 T 26-04-2016 PAM18_RS12555 2c819ab64a172ee96c79a12e928abd54 82 Gene3D G3DSA:1.10.260.40 18 69 1.5E-6 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS12555 2c819ab64a172ee96c79a12e928abd54 82 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 16 66 1.4E-7 T 26-04-2016 IPR031856 Putative bacterial antitoxin YdaS PAM18_RS21245 53239c734c6b92580bf673e4162968eb 126 PANTHER PTHR21366:SF15 1 125 5.1E-79 T 26-04-2016 PAM18_RS21245 53239c734c6b92580bf673e4162968eb 126 PANTHER PTHR21366 1 125 5.1E-79 T 26-04-2016 PAM18_RS21245 53239c734c6b92580bf673e4162968eb 126 SUPERFAMILY SSF54593 1 124 2.69E-27 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21245 53239c734c6b92580bf673e4162968eb 126 Gene3D G3DSA:3.10.180.10 7 125 1.1E-34 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAM18_RS21245 53239c734c6b92580bf673e4162968eb 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 2.7E-9 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAM18_RS01915 ebbf9239c6157df9529a9cfa710c427c 125 PANTHER PTHR10584 5 66 1.9E-20 T 26-04-2016 PAM18_RS01915 ebbf9239c6157df9529a9cfa710c427c 125 PANTHER PTHR10584:SF191 5 66 1.9E-20 T 26-04-2016 PAM18_RS01915 ebbf9239c6157df9529a9cfa710c427c 125 Pfam PF04241 Protein of unknown function (DUF423) 19 105 1.1E-29 T 26-04-2016 IPR006696 Protein of unknown function DUF423 PAM18_RS06455 ca30809410647bf9818202e4f0f55557 244 Pfam PF12679 ABC-2 family transporter protein 67 237 6.5E-9 T 26-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 PAM18_RS06455 ca30809410647bf9818202e4f0f55557 244 PANTHER PTHR30294:SF5 1 236 4.9E-115 T 26-04-2016 PAM18_RS06455 ca30809410647bf9818202e4f0f55557 244 PANTHER PTHR30294 1 236 4.9E-115 T 26-04-2016 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 283 37.994 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PANTHER PTHR22855 3 288 2.6E-169 T 26-04-2016 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 Pfam PF01039 Carboxyl transferase domain 98 242 4.3E-17 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.0E-38 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.0E-38 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.0E-38 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.0E-38 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.0E-38 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 SUPERFAMILY SSF52096 27 285 6.53E-88 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 14 286 6.8E-133 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 PANTHER PTHR22855:SF17 3 288 2.6E-169 T 26-04-2016 PAM18_RS09505 8ce4c28349bf87acf6b1918c73a18567 290 Gene3D G3DSA:3.90.226.10 20 284 2.4E-72 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS22410 ee33b31a1e88964ded31b6a01fcd1c45 160 Pfam PF01478 Type IV leader peptidase family 5 109 5.9E-9 T 26-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 259 3.8E-86 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 PANTHER PTHR30589:SF0 1 263 1.1E-117 T 26-04-2016 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 20.041 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 1.7E-84 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 PAM18_RS01720 4c362dbea672b21f9b0d4c5e71af5614 266 PANTHER PTHR30589 1 263 1.1E-117 T 26-04-2016 PAM18_RS21825 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 75 2.2E-16 T 26-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PAM18_RS21825 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 122 175 2.7E-11 T 26-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal PAM18_RS21825 83e31d4118eb4d4360df8fb5e4d0b54e 194 SUPERFAMILY SSF89069 6 72 7.32E-14 T 26-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PAM18_RS21825 83e31d4118eb4d4360df8fb5e4d0b54e 194 PANTHER PTHR38104 1 194 3.4E-70 T 26-04-2016 PAM18_RS14745 cfea98c05869da1b35c2c4609776b3d0 365 SUPERFAMILY SSF56059 122 256 3.24E-6 T 26-04-2016 PAM18_RS14745 cfea98c05869da1b35c2c4609776b3d0 365 Pfam PF11379 Protein of unknown function (DUF3182) 10 360 1.1E-141 T 26-04-2016 IPR021519 Protein of unknown function DUF3182 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 SUPERFAMILY SSF111369 41 269 3.01E-25 T 26-04-2016 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 PANTHER PTHR30469:SF7 1 357 2.5E-221 T 26-04-2016 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 Gene3D G3DSA:2.40.50.100 57 85 1.6E-15 T 26-04-2016 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 Gene3D G3DSA:2.40.50.100 160 191 1.6E-15 T 26-04-2016 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 PANTHER PTHR30469 1 357 2.5E-221 T 26-04-2016 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 346 1.8E-69 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS00790 464d9182ab89876e85faf73e9ba3ebaf 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 254 9.0E-17 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS00325 df47223803e820b29cf12aa894cd9424 375 PIRSF PIRSF029285 5 374 1.0E-178 T 26-04-2016 IPR014553 Predicted aminopeptidase PAM18_RS00325 df47223803e820b29cf12aa894cd9424 375 Pfam PF10023 Putative aminopeptidase 49 367 1.3E-134 T 26-04-2016 IPR014553 Predicted aminopeptidase PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 636 5.4E-128 T 26-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PANTHER PTHR30009:SF0 1 418 0.0 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PANTHER PTHR30009:SF0 471 654 0.0 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.6E-97 T 26-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 639 2.7E-238 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF01578 Cytochrome C assembly protein 89 296 7.1E-56 T 26-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 629 642 3.8E-65 T 26-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PANTHER PTHR30009 1 418 0.0 T 26-04-2016 PAM18_RS18690 67e62be752845e8f0a430f67eb3e2fa9 657 PANTHER PTHR30009 471 654 0.0 T 26-04-2016 PAM18_RS20250 e190db32bf9778a9dfa861120c4b6437 237 PANTHER PTHR30435:SF15 14 223 3.3E-75 T 26-04-2016 PAM18_RS20250 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13860 FlgD Ig-like domain 119 189 3.4E-22 T 26-04-2016 IPR025965 FlgD Ig-like domain PAM18_RS20250 e190db32bf9778a9dfa861120c4b6437 237 PANTHER PTHR30435 14 223 3.3E-75 T 26-04-2016 PAM18_RS20250 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 89 6.9E-25 T 26-04-2016 IPR005648 Flagellar hook capping protein PAM18_RS20250 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13861 FlgD Tudor-like domain 97 233 2.1E-17 T 26-04-2016 IPR025963 FlgD Tudor-like domain PAM18_RS15950 40fe2292257d8606d7da24bf6e73526a 207 PANTHER PTHR13256 36 204 8.8E-76 T 26-04-2016 PAM18_RS15950 40fe2292257d8606d7da24bf6e73526a 207 PANTHER PTHR13256:SF24 36 204 8.8E-76 T 26-04-2016 PAM18_RS15950 40fe2292257d8606d7da24bf6e73526a 207 Gene3D G3DSA:3.40.630.30 34 203 4.4E-42 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS15950 40fe2292257d8606d7da24bf6e73526a 207 Pfam PF13302 Acetyltransferase (GNAT) domain 35 179 7.6E-18 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS15950 40fe2292257d8606d7da24bf6e73526a 207 SUPERFAMILY SSF55729 30 202 1.14E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS05110 4988d659c768a7725742870bc3b5f798 678 PANTHER PTHR31645 2 633 2.0E-168 T 26-04-2016 PAM18_RS05110 4988d659c768a7725742870bc3b5f798 678 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 636 2.5E-214 T 26-04-2016 IPR004814 Oligopeptide transporter OPT PAM18_RS05110 4988d659c768a7725742870bc3b5f798 678 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 7 632 1.5E-112 T 26-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PAM18_RS05110 4988d659c768a7725742870bc3b5f798 678 PANTHER PTHR31645:SF0 2 633 2.0E-168 T 26-04-2016 PAM18_RS05110 4988d659c768a7725742870bc3b5f798 678 Pfam PF03169 OPT oligopeptide transporter protein 13 634 6.6E-109 T 26-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PAM18_RS24140 66d3938ce389346054971e86aadfb844 192 Pfam PF01169 Uncharacterized protein family UPF0016 9 79 2.2E-19 T 26-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PAM18_RS24140 66d3938ce389346054971e86aadfb844 192 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 7.6E-22 T 26-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PAM18_RS24140 66d3938ce389346054971e86aadfb844 192 PANTHER PTHR12608 9 189 4.5E-41 T 26-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PAM18_RS05055 0a65cf3107ae9a6889778fda7fd90de4 196 PANTHER PTHR13256:SF19 1 196 2.3E-69 T 26-04-2016 PAM18_RS05055 0a65cf3107ae9a6889778fda7fd90de4 196 SUPERFAMILY SSF55729 15 189 2.08E-36 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS05055 0a65cf3107ae9a6889778fda7fd90de4 196 Pfam PF13302 Acetyltransferase (GNAT) domain 21 162 1.1E-29 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS05055 0a65cf3107ae9a6889778fda7fd90de4 196 PANTHER PTHR13256 1 196 2.3E-69 T 26-04-2016 PAM18_RS05055 0a65cf3107ae9a6889778fda7fd90de4 196 Gene3D G3DSA:3.40.630.30 13 194 2.0E-46 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 PANTHER PTHR23416:SF69 30 220 2.6E-66 T 26-04-2016 PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 PANTHER PTHR23416 30 220 2.6E-66 T 26-04-2016 PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 5.4E-8 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 SUPERFAMILY SSF51161 35 192 2.91E-37 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS05505 08b92b5e48adcb7ae4ab51cc77799b4a 229 Gene3D G3DSA:2.160.10.10 33 188 3.6E-40 T 26-04-2016 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PRINTS PR00721 Stomatin signature 239 256 2.5E-16 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PRINTS PR00721 Stomatin signature 327 350 2.5E-16 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PRINTS PR00721 Stomatin signature 283 301 2.5E-16 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PRINTS PR00721 Stomatin signature 302 323 2.5E-16 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PRINTS PR00721 Stomatin signature 204 225 2.5E-16 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 SMART SM00244 148 307 2.1E-14 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 SUPERFAMILY SSF117892 187 313 2.35E-25 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 Pfam PF01145 SPFH domain / Band 7 family 152 323 3.3E-21 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PANTHER PTHR10264 69 365 3.5E-133 T 26-04-2016 IPR001972 Stomatin family GO:0016020 PAM18_RS23895 b121876a61a4836ea6fa643dc869088f 381 PANTHER PTHR10264:SF83 69 365 3.5E-133 T 26-04-2016 PAM18_RS25970 e9c7b42f1c41226974ee4989fb6407b4 236 SUPERFAMILY SSF159594 28 189 3.14E-21 T 26-04-2016 PAM18_RS25970 e9c7b42f1c41226974ee4989fb6407b4 236 Gene3D G3DSA:3.40.50.10610 19 190 1.6E-16 T 26-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PAM18_RS25970 e9c7b42f1c41226974ee4989fb6407b4 236 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 186 4.5E-38 T 26-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component PAM18_RS16520 2a12620b4e485cdfce6d1016767d0cc7 451 PANTHER PTHR11785:SF259 9 432 4.6E-164 T 26-04-2016 PAM18_RS16520 2a12620b4e485cdfce6d1016767d0cc7 451 PANTHER PTHR11785 9 432 4.6E-164 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS16520 2a12620b4e485cdfce6d1016767d0cc7 451 Pfam PF13520 Amino acid permease 13 410 1.0E-54 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS16520 2a12620b4e485cdfce6d1016767d0cc7 451 PIRSF PIRSF006060 2 450 3.1E-73 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 Gene3D G3DSA:3.40.50.300 17 164 1.8E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 PANTHER PTHR12169 323 374 5.0E-152 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 PANTHER PTHR12169 6 293 5.0E-152 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 SUPERFAMILY SSF52540 52 179 1.58E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 PANTHER PTHR12169:SF11 323 374 5.0E-152 T 26-04-2016 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 PANTHER PTHR12169:SF11 6 293 5.0E-152 T 26-04-2016 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 Pfam PF03969 AFG1-like ATPase 11 293 2.7E-82 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS13825 65015d70a23450ebb40d9fbe831551ee 384 Pfam PF03969 AFG1-like ATPase 316 376 6.2E-14 T 26-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 SUPERFAMILY SSF56784 1 222 2.24E-60 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 2 222 42.683 T 26-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 PANTHER PTHR20371 1 224 5.5E-110 T 26-04-2016 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 210 8.6E-80 T 26-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 Gene3D G3DSA:3.40.50.1000 1 223 7.8E-25 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.0E-7 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 8.0E-7 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 8.0E-7 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS17235 238b27fcd845dd2e49852b7aedee8405 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 8.0E-7 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 PAM18_RS04740 340af6b78202be0f948dc92bd09a76f4 407 SUPERFAMILY SSF53474 21 283 2.96E-38 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04740 340af6b78202be0f948dc92bd09a76f4 407 Gene3D G3DSA:3.40.50.1820 21 283 4.7E-35 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS04740 340af6b78202be0f948dc92bd09a76f4 407 Pfam PF00561 alpha/beta hydrolase fold 40 270 5.9E-13 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS04740 340af6b78202be0f948dc92bd09a76f4 407 PANTHER PTHR10992 21 284 2.5E-26 T 26-04-2016 PAM18_RS04740 340af6b78202be0f948dc92bd09a76f4 407 PANTHER PTHR10992:SF107 21 284 2.5E-26 T 26-04-2016 PAM18_RS16125 ab0645a58c6af25131a21a2e635c4d63 424 Pfam PF00487 Fatty acid desaturase 86 357 1.1E-7 T 26-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 PAM18_RS09790 57e2014bcdfd8b74a0b3c7c83f8974ce 158 Gene3D G3DSA:1.10.260.40 14 65 9.6E-4 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS09790 57e2014bcdfd8b74a0b3c7c83f8974ce 158 SUPERFAMILY SSF47413 12 64 4.07E-5 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS25085 fabc27c43f11f7a0d74abc0110e3f40f 249 PANTHER PTHR10108 3 192 2.6E-22 T 26-04-2016 PAM18_RS25085 fabc27c43f11f7a0d74abc0110e3f40f 249 SUPERFAMILY SSF53335 4 247 3.19E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25085 fabc27c43f11f7a0d74abc0110e3f40f 249 Gene3D G3DSA:3.40.50.150 34 247 1.6E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25085 fabc27c43f11f7a0d74abc0110e3f40f 249 PANTHER PTHR10108:SF779 3 192 2.6E-22 T 26-04-2016 PAM18_RS25085 fabc27c43f11f7a0d74abc0110e3f40f 249 Pfam PF13489 Methyltransferase domain 31 159 5.9E-15 T 26-04-2016 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 PANTHER PTHR33711:SF1 6 238 2.1E-146 T 26-04-2016 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 PANTHER PTHR33711 6 238 2.1E-146 T 26-04-2016 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 43 1.2E-14 T 26-04-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 1.5E-105 T 26-04-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 Gene3D G3DSA:2.60.130.10 10 238 2.2E-77 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 SUPERFAMILY SSF49482 11 238 1.15E-74 T 26-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 Pfam PF00775 Dioxygenase 49 230 6.4E-57 T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS00775 14d3b6ace13a1e7ec250e77444a61c93 239 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 26-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 PAM18_RS24710 4bdf48716dbf23b347b6be4f7d95030e 431 PIRSF PIRSF005353 1 431 2.3E-180 T 26-04-2016 IPR026033 Purine permease PbuG-like PAM18_RS24710 4bdf48716dbf23b347b6be4f7d95030e 431 PANTHER PTHR11119 1 418 1.6E-176 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS24710 4bdf48716dbf23b347b6be4f7d95030e 431 PANTHER PTHR11119:SF9 1 418 1.6E-176 T 26-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 PAM18_RS24710 4bdf48716dbf23b347b6be4f7d95030e 431 Pfam PF00860 Permease family 17 391 5.2E-54 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 PANTHER PTHR13847:SF148 1 63 2.2E-253 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 PANTHER PTHR13847:SF148 107 422 2.2E-253 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 PANTHER PTHR13847 1 63 2.2E-253 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 PANTHER PTHR13847 107 422 2.2E-253 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 50.179 T 26-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.30.9.10 136 189 5.3E-13 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.30.9.10 270 359 5.3E-13 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF54373 270 360 1.11E-17 T 26-04-2016 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 190 269 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 108 122 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 360 422 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 1 55 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 1 54 2.07E-54 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 360 416 2.07E-54 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 107 270 2.07E-54 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS27715 80ba7b1828922b7c1092a7f4435af112 432 Pfam PF01266 FAD dependent oxidoreductase 3 398 8.0E-66 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 SUPERFAMILY SSF161098 530 746 2.09E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 SUPERFAMILY SSF161098 452 521 3.01E-6 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 Gene3D G3DSA:2.130.10.10 106 376 4.8E-7 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 Gene3D G3DSA:1.10.3720.10 51 71 2.7E-9 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 Gene3D G3DSA:1.10.3720.10 442 521 2.7E-9 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 Gene3D G3DSA:1.10.3720.10 530 758 1.4E-31 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 PANTHER PTHR30425 592 761 9.1E-190 T 26-04-2016 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 PANTHER PTHR30425 317 526 9.1E-190 T 26-04-2016 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 PANTHER PTHR30425:SF3 592 761 9.1E-190 T 26-04-2016 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 PANTHER PTHR30425:SF3 317 526 9.1E-190 T 26-04-2016 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 SUPERFAMILY SSF50978 106 393 1.45E-9 T 26-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 PAM18_RS28035 634d65d5ad8cc1780f6c7696376f1e81 761 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 478 756 1.5E-10 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS18320 fd7f9e16cdcd73aac3e4027cf4575089 135 Gene3D G3DSA:3.10.450.50 3 114 1.7E-16 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS18320 fd7f9e16cdcd73aac3e4027cf4575089 135 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 4 116 1.0E-9 T 26-04-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 PAM18_RS18320 fd7f9e16cdcd73aac3e4027cf4575089 135 SUPERFAMILY SSF54427 5 122 1.15E-27 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS18320 fd7f9e16cdcd73aac3e4027cf4575089 135 Pfam PF14534 Domain of unknown function (DUF4440) 15 113 5.2E-10 T 26-04-2016 IPR027843 Domain of unknown function DUF4440 PAM18_RS27640 667db6c23d7a55f034f55aab0a6978b7 86 PANTHER PTHR38040:SF1 2 86 5.8E-38 T 26-04-2016 PAM18_RS27640 667db6c23d7a55f034f55aab0a6978b7 86 PANTHER PTHR38040 2 86 5.8E-38 T 26-04-2016 PAM18_RS27640 667db6c23d7a55f034f55aab0a6978b7 86 Pfam PF04380 Membrane fusogenic activity 5 78 4.8E-25 T 26-04-2016 IPR007475 Membrane fusogenic activity PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 PANTHER PTHR11048:SF3 12 296 6.2E-84 T 26-04-2016 PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 297 19.81 T 26-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 Pfam PF01040 UbiA prenyltransferase family 29 285 4.9E-60 T 26-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 26-04-2016 IPR030470 UbiA prenyltransferase conserved site PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 PANTHER PTHR11048 12 296 6.2E-84 T 26-04-2016 PAM18_RS00575 e61a8966da5d119ca4e1d14a65f0e998 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 296 7.2E-106 T 26-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 PAM18_RS18075 072baebfea90446ae5f169acd66eaa4a 177 PANTHER PTHR23091:SF262 1 175 4.3E-100 T 26-04-2016 PAM18_RS18075 072baebfea90446ae5f169acd66eaa4a 177 Pfam PF00583 Acetyltransferase (GNAT) family 65 144 3.8E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS18075 072baebfea90446ae5f169acd66eaa4a 177 SUPERFAMILY SSF55729 1 169 1.28E-39 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18075 072baebfea90446ae5f169acd66eaa4a 177 Gene3D G3DSA:3.40.630.30 6 168 7.5E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18075 072baebfea90446ae5f169acd66eaa4a 177 PANTHER PTHR23091 1 175 4.3E-100 T 26-04-2016 PAM18_RS06890 4558e21262b468f3b79edcc4ecbb9246 134 SMART SM00507 48 100 2.2E-6 T 26-04-2016 IPR003615 HNH nuclease PAM18_RS06890 4558e21262b468f3b79edcc4ecbb9246 134 Pfam PF01844 HNH endonuclease 61 104 1.4E-8 T 26-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PAM18_RS04705 44ecead62cce83cb4ba5146891e48f5b 151 Pfam PF01575 MaoC like domain 13 116 1.7E-25 T 26-04-2016 IPR002539 MaoC-like domain PAM18_RS04705 44ecead62cce83cb4ba5146891e48f5b 151 PANTHER PTHR13078 12 144 2.2E-39 T 26-04-2016 PAM18_RS04705 44ecead62cce83cb4ba5146891e48f5b 151 SUPERFAMILY SSF54637 9 146 7.47E-37 T 26-04-2016 IPR029069 HotDog domain PAM18_RS04705 44ecead62cce83cb4ba5146891e48f5b 151 Gene3D G3DSA:3.10.129.10 13 146 1.5E-34 T 26-04-2016 IPR029069 HotDog domain PAM18_RS19420 03f1ec9234e0291b19c3c1d5bd365ec3 167 SUPERFAMILY SSF52833 10 163 1.55E-9 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS19420 03f1ec9234e0291b19c3c1d5bd365ec3 167 Pfam PF14595 Thioredoxin 13 135 5.6E-24 T 26-04-2016 PAM18_RS19420 03f1ec9234e0291b19c3c1d5bd365ec3 167 Gene3D G3DSA:3.40.30.10 3 163 1.2E-39 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 263 8.5E-101 T 26-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 SUPERFAMILY SSF51366 14 265 2.94E-86 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 PANTHER PTHR22854 2 264 2.4E-114 T 26-04-2016 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 PANTHER PTHR22854:SF2 2 264 2.4E-114 T 26-04-2016 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 Gene3D G3DSA:3.20.20.70 5 267 6.3E-105 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 265 36.64 T 26-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PAM18_RS03205 e0e815794f171a03c9fe0e4cf4a1af3d 278 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 26-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 PAM18_RS21000 3aff8626dcb9ec64bf60e34acca2a047 135 PANTHER PTHR35535:SF2 1 135 1.4E-39 T 26-04-2016 PAM18_RS21000 3aff8626dcb9ec64bf60e34acca2a047 135 Pfam PF03724 META domain 28 129 2.8E-27 T 26-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ PAM18_RS21000 3aff8626dcb9ec64bf60e34acca2a047 135 PANTHER PTHR35535 1 135 1.4E-39 T 26-04-2016 PAM18_RS19045 ff92ccc47c9e26378f0fe99cb3a50e5d 313 PANTHER PTHR11061 1 267 5.5E-136 T 26-04-2016 PAM18_RS19045 ff92ccc47c9e26378f0fe99cb3a50e5d 313 SUPERFAMILY SSF53335 4 287 3.31E-53 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19045 ff92ccc47c9e26378f0fe99cb3a50e5d 313 Gene3D G3DSA:3.40.50.150 72 310 1.1E-55 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19045 ff92ccc47c9e26378f0fe99cb3a50e5d 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 5.0E-171 T 26-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 PAM18_RS19045 ff92ccc47c9e26378f0fe99cb3a50e5d 313 PANTHER PTHR11061:SF34 1 267 5.5E-136 T 26-04-2016 PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 340 7.2E-38 T 26-04-2016 IPR017516 AbrB duplication PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 164 2.9E-37 T 26-04-2016 IPR017516 AbrB duplication PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 PANTHER PTHR38457 2 345 9.2E-101 T 26-04-2016 PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 PIRSF PIRSF038991 3 345 2.3E-68 T 26-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 PANTHER PTHR38457:SF1 2 345 9.2E-101 T 26-04-2016 PAM18_RS21890 f5725f82c6c1fb4047e4c17cbb6920be 345 Pfam PF05145 Putative ammonia monooxygenase 33 340 1.5E-84 T 26-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 PAM18_RS23330 72b076259ca0ed64c0fba95455a196e4 1276 PANTHER PTHR38690 3 1276 0.0 T 26-04-2016 PAM18_RS23330 72b076259ca0ed64c0fba95455a196e4 1276 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1275 1.2E-292 T 26-04-2016 IPR011836 Conserved hypothetical protein CHP02099 PAM18_RS23330 72b076259ca0ed64c0fba95455a196e4 1276 Pfam PF13502 AsmA-like C-terminal region 1020 1265 6.7E-52 T 26-04-2016 IPR032712 AsmA-like, C-terminal PAM18_RS23330 72b076259ca0ed64c0fba95455a196e4 1276 Pfam PF13116 Protein of unknown function 513 798 1.0E-49 T 26-04-2016 IPR025263 Domain of unknown function DUF3971 PAM18_RS12645 241f939073c9f759e192e61f2b8b5811 331 Pfam PF03864 Phage major capsid protein E 12 329 7.1E-96 T 26-04-2016 IPR005564 Major capsid protein GpE GO:0019028 PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 SUPERFAMILY SSF54523 17 70 1.57E-5 T 26-04-2016 PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 PANTHER PTHR39583 7 211 6.0E-61 T 26-04-2016 PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 3.5E-7 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 PANTHER PTHR39583:SF1 7 211 6.0E-61 T 26-04-2016 PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 36 2.7E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS22270 def6fd380e08d5fc76f793cb9ad265a3 213 SUPERFAMILY SSF54523 56 208 1.18E-8 T 26-04-2016 PAM18_RS04950 4522eef0e41926de2de81533b838f9db 69 Pfam PF10981 Protein of unknown function (DUF2788) 14 60 2.8E-22 T 26-04-2016 IPR021249 Protein of unknown function DUF2788 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 SUPERFAMILY SSF46992 3 86 3.14E-33 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 Gene3D G3DSA:1.20.58.110 3 86 6.9E-33 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 PANTHER PTHR33398 2 86 1.0E-39 T 26-04-2016 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 7.8E-30 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.91 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 Pfam PF01649 Ribosomal protein S20 2 84 1.5E-29 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23795 0f99b2ba4f548c4219b86f4f7d705ddb 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 91 6.0E-35 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 SMART SM00671 114 147 6.4E-6 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 SMART SM00671 148 183 1.5E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 SMART SM00671 76 111 6.6E-5 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 SMART SM00671 40 75 1.2E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 PANTHER PTHR11102 34 269 1.4E-41 T 26-04-2016 PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 SUPERFAMILY SSF81901 15 251 8.28E-44 T 26-04-2016 PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Gene3D G3DSA:1.25.40.10 21 263 5.9E-45 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 77 110 0.049 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 236 250 0.71 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 202 215 120.0 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 148 183 5.2E-6 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 41 75 1.8E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS23530 441273ea6f164eec239e261edeb06b29 271 Pfam PF08238 Sel1 repeat 114 147 3.5E-7 T 26-04-2016 IPR006597 Sel1-like repeat PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 Gene3D G3DSA:2.40.50.100 78 153 8.9E-32 T 26-04-2016 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.2E-17 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.2E-17 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.2E-17 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 PANTHER PTHR23151 1 154 3.6E-54 T 26-04-2016 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 26-04-2016 IPR001882 Biotin-binding site PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 9.3E-60 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 SUPERFAMILY SSF51230 78 153 2.49E-25 T 26-04-2016 IPR011053 Single hybrid motif PAM18_RS25380 4bc925f52d2d237d7f36a6cc24a4fc93 154 Pfam PF00364 Biotin-requiring enzyme 80 153 4.1E-26 T 26-04-2016 IPR000089 Biotin/lipoyl attachment PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PIRSF PIRSF004749 1 168 5.1E-60 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PANTHER PTHR10458 1 168 5.9E-107 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 Pfam PF01327 Polypeptide deformylase 4 153 6.6E-53 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 SUPERFAMILY SSF56420 2 165 2.09E-64 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 102 120 4.7E-39 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.7E-39 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 121 150 4.7E-39 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PRINTS PR01576 Peptide deformylase signature 90 101 4.7E-39 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 PANTHER PTHR10458:SF10 1 168 5.9E-107 T 26-04-2016 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 Gene3D G3DSA:3.90.45.10 5 166 1.1E-67 T 26-04-2016 IPR023635 Peptide deformylase PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 32.206 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS00095 847a93a0606dca68a677e2810f62c284 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 3.7E-56 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PRINTS PR00607 Class IE cytochrome C signature 70 80 4.3E-7 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PRINTS PR00607 Class IE cytochrome C signature 59 70 4.3E-7 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PRINTS PR00607 Class IE cytochrome C signature 98 110 4.3E-7 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PRINTS PR00607 Class IE cytochrome C signature 113 124 4.3E-7 T 26-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 51 123 4.3E-15 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PANTHER PTHR40942 1 128 7.4E-111 T 26-04-2016 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 PANTHER PTHR40942:SF3 1 128 7.4E-111 T 26-04-2016 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 Gene3D G3DSA:1.10.760.10 53 124 1.5E-27 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS27835 99ef45c503c7e262d51c9a9948064ba3 129 SUPERFAMILY SSF46626 54 124 2.4E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS21630 c1de274fed300a8cc3e8f36c57fcce28 506 Pfam PF03929 PepSY-associated TM region 10 356 1.1E-50 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS21630 c1de274fed300a8cc3e8f36c57fcce28 506 PANTHER PTHR34219:SF4 1 495 2.4E-269 T 26-04-2016 PAM18_RS21630 c1de274fed300a8cc3e8f36c57fcce28 506 PANTHER PTHR34219 1 495 2.4E-269 T 26-04-2016 PAM18_RS01580 0ed828df8e2dd68b41ea2741a1847bfd 145 Pfam PF14347 Domain of unknown function (DUF4399) 54 145 7.8E-39 T 26-04-2016 IPR025512 Domain of unknown function DUF4399 PAM18_RS07365 392f6026a079a761c5a94a8c05220068 549 PANTHER PTHR33908 2 545 2.1E-154 T 26-04-2016 PAM18_RS07365 392f6026a079a761c5a94a8c05220068 549 PANTHER PTHR33908:SF3 2 545 2.1E-154 T 26-04-2016 PAM18_RS07365 392f6026a079a761c5a94a8c05220068 549 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 10 236 3.6E-30 T 26-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 PAM18_RS07365 392f6026a079a761c5a94a8c05220068 549 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 547 41.412 T 26-04-2016 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 UniPathway: UPA00037 PAM18_RS21710 9aa3fbc666f90cf45d673880747dbf90 101 PANTHER PTHR30561 1 101 1.5E-40 T 26-04-2016 PAM18_RS21710 9aa3fbc666f90cf45d673880747dbf90 101 SUPERFAMILY SSF103481 5 100 3.4E-19 T 26-04-2016 PAM18_RS21710 9aa3fbc666f90cf45d673880747dbf90 101 PANTHER PTHR30561:SF0 1 101 1.5E-40 T 26-04-2016 PAM18_RS21710 9aa3fbc666f90cf45d673880747dbf90 101 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-23 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 SUPERFAMILY SSF51735 112 270 5.81E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 SMART SM00829 11 322 8.2E-14 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 SUPERFAMILY SSF50129 10 141 1.42E-33 T 26-04-2016 IPR011032 GroES-like PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 PANTHER PTHR11695 16 324 1.2E-109 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 Pfam PF00107 Zinc-binding dehydrogenase 151 256 3.1E-21 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 Gene3D G3DSA:3.40.50.720 146 254 2.9E-25 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 Gene3D G3DSA:3.90.180.10 6 145 6.9E-37 T 26-04-2016 IPR011032 GroES-like PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 PANTHER PTHR11695:SF605 16 324 1.2E-109 T 26-04-2016 PAM18_RS11785 ac06436f1a10c6fd3361c4397199f2fa 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.9E-6 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PAM18_RS24180 2bd77a9dc087ef1465d951c1eb571c0e 60 Pfam PF14255 Cysteine-rich CPXCG 7 56 8.6E-24 T 26-04-2016 IPR025990 Cysteine-rich CPXCG protein PAM18_RS24180 2bd77a9dc087ef1465d951c1eb571c0e 60 PIRSF PIRSF037225 1 60 5.1E-26 T 26-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 Pfam PF14489 QueF-like protein 190 262 1.3E-23 T 26-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 PANTHER PTHR34354:SF1 1 276 7.6E-98 T 26-04-2016 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 Gene3D G3DSA:3.30.1130.10 141 276 6.5E-50 T 26-04-2016 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 PANTHER PTHR34354 1 276 7.6E-98 T 26-04-2016 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 150.477 T 26-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 TIGRFAM TIGR03138 QueF: queuine synthase 5 276 2.1E-123 T 26-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 PIRSF PIRSF004750 1 276 7.3E-119 T 26-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 Gene3D G3DSA:3.30.1130.10 16 132 5.6E-40 T 26-04-2016 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 126 1.5E-46 T 26-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 PAM18_RS11070 bbd147d5f969b98e8dfafa7a650cc300 276 SUPERFAMILY SSF55620 132 259 1.78E-10 T 26-04-2016 PAM18_RS22365 256d4074302e2336e85a0bf25b58dafe 227 Gene3D G3DSA:3.90.1550.10 6 213 4.1E-51 T 26-04-2016 PAM18_RS22365 256d4074302e2336e85a0bf25b58dafe 227 SUPERFAMILY SSF55681 6 214 1.66E-45 T 26-04-2016 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 462 5.1E-88 T 26-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 SUPERFAMILY SSF51735 2 286 3.15E-104 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PANTHER PTHR30562 18 489 3.4E-262 T 26-04-2016 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 SUPERFAMILY SSF48179 287 490 2.41E-61 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 222 234 - T 26-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 Gene3D G3DSA:1.10.1040.10 286 489 6.6E-69 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 Gene3D G3DSA:3.40.50.720 4 285 5.4E-115 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PANTHER PTHR30562:SF4 18 489 3.4E-262 T 26-04-2016 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 5.97E-21 T 26-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PRINTS PR00084 Mannitol dehydrogenase signature 222 235 5.97E-21 T 26-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PRINTS PR00084 Mannitol dehydrogenase signature 252 267 5.97E-21 T 26-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 PRINTS PR00084 Mannitol dehydrogenase signature 183 196 5.97E-21 T 26-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PAM18_RS13880 3eefadc15349047b14f294c4f5f102ed 491 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 27 192 6.8E-47 T 26-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PAM18_RS02445 74bd31227d9e8b188a1de4c17a0967dc 147 SUPERFAMILY SSF55729 3 145 5.66E-33 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS02445 74bd31227d9e8b188a1de4c17a0967dc 147 PANTHER PTHR23091:SF250 6 145 9.8E-70 T 26-04-2016 PAM18_RS02445 74bd31227d9e8b188a1de4c17a0967dc 147 PANTHER PTHR23091 6 145 9.8E-70 T 26-04-2016 PAM18_RS02445 74bd31227d9e8b188a1de4c17a0967dc 147 Pfam PF00583 Acetyltransferase (GNAT) family 58 134 1.2E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS02445 74bd31227d9e8b188a1de4c17a0967dc 147 Gene3D G3DSA:3.40.630.30 4 144 2.1E-33 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS13475 3fd5a631d7a9ec1f053bb50047eaad8b 324 TIGRFAM TIGR03637 cas1_YPEST: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST 12 318 5.1E-154 T 26-04-2016 IPR019857 CRISPR-associated protein Cas1, YPEST subtype PAM18_RS13475 3fd5a631d7a9ec1f053bb50047eaad8b 324 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 19 294 1.6E-62 T 26-04-2016 IPR002729 CRISPR-associated protein Cas1 PAM18_RS13475 3fd5a631d7a9ec1f053bb50047eaad8b 324 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 11 322 9.633 T 26-04-2016 IPR002729 CRISPR-associated protein Cas1 PAM18_RS13475 3fd5a631d7a9ec1f053bb50047eaad8b 324 Pfam PF01867 CRISPR associated protein Cas1 24 296 6.7E-28 T 26-04-2016 IPR002729 CRISPR-associated protein Cas1 PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 Gene3D G3DSA:1.20.950.20 3 215 1.7E-63 T 26-04-2016 PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 224 2.9E-80 T 26-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 PANTHER PTHR30598:SF3 1 227 1.4E-103 T 26-04-2016 PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 SUPERFAMILY SSF103501 4 224 6.28E-64 T 26-04-2016 IPR023234 NarG-like domain PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 PANTHER PTHR30598 1 227 1.4E-103 T 26-04-2016 PAM18_RS05430 d8bfec742b88dc99323941db02980b16 227 Pfam PF02665 Nitrate reductase gamma subunit 5 224 4.1E-77 T 26-04-2016 IPR023234 NarG-like domain PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 26-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 Gene3D G3DSA:1.20.1250.20 22 202 8.5E-35 T 26-04-2016 PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 Gene3D G3DSA:1.20.1250.20 239 424 7.5E-29 T 26-04-2016 PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 Pfam PF07690 Major Facilitator Superfamily 27 380 7.6E-43 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 PANTHER PTHR23511 23 423 4.2E-75 T 26-04-2016 PAM18_RS20560 a952cb22740dc2f094046e4624a080d5 451 SUPERFAMILY SSF103473 11 414 1.83E-77 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS25595 4b1c49336f542caa28c1c038b9989699 209 Gene3D G3DSA:1.10.357.10 2 177 1.1E-27 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS25595 4b1c49336f542caa28c1c038b9989699 209 SUPERFAMILY SSF46689 2 78 7.18E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS25595 4b1c49336f542caa28c1c038b9989699 209 PANTHER PTHR30055 1 205 1.3E-89 T 26-04-2016 PAM18_RS25595 4b1c49336f542caa28c1c038b9989699 209 PANTHER PTHR30055:SF39 1 205 1.3E-89 T 26-04-2016 PAM18_RS25595 4b1c49336f542caa28c1c038b9989699 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-8 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PAM18_RS08530 04be176222d1950544d6bc763f89c0e1 664 PANTHER PTHR30509:SF1 2 249 2.4E-183 T 26-04-2016 PAM18_RS08530 04be176222d1950544d6bc763f89c0e1 664 PANTHER PTHR30509:SF1 302 635 2.4E-183 T 26-04-2016 PAM18_RS08530 04be176222d1950544d6bc763f89c0e1 664 PANTHER PTHR30509 2 249 2.4E-183 T 26-04-2016 PAM18_RS08530 04be176222d1950544d6bc763f89c0e1 664 PANTHER PTHR30509 302 635 2.4E-183 T 26-04-2016 PAM18_RS08530 04be176222d1950544d6bc763f89c0e1 664 Pfam PF04632 Fusaric acid resistance protein family 16 657 1.9E-195 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 SUPERFAMILY SSF52540 4 165 2.16E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 168 1.9E-38 T 26-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 318 1.5E-8 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 PANTHER PTHR13748 1 319 4.2E-51 T 26-04-2016 PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 SMART SM00833 235 318 6.5E-7 T 26-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAM18_RS28895 c799041ab5c0cc114039db5d0e354f5a 322 Gene3D G3DSA:3.40.50.300 4 170 1.8E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 Gene3D G3DSA:2.40.50.100 70 102 4.6E-16 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 Gene3D G3DSA:2.40.50.100 163 194 4.6E-16 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 366 2.0E-79 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 269 7.9E-35 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 PANTHER PTHR30469:SF11 1 305 1.5E-138 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 PANTHER PTHR30469:SF11 321 376 1.5E-138 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 PANTHER PTHR30469 1 305 1.5E-138 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 PANTHER PTHR30469 321 376 1.5E-138 T 26-04-2016 PAM18_RS22815 b11ca8332f0dcfae0e22bae4d2d69030 376 SUPERFAMILY SSF111369 60 273 4.05E-45 T 26-04-2016 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF109635 1 92 3.92E-24 T 26-04-2016 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 11 132 27.461 T 26-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 PANTHER PTHR33823:SF2 9 132 1.8E-31 T 26-04-2016 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 PANTHER PTHR33823 9 132 1.8E-31 T 26-04-2016 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 15 123 4.5E-40 T 26-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 126 5.3E-11 T 26-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PAM18_RS28915 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF57716 93 131 2.71E-9 T 26-04-2016 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 352 372 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 PANTHER PTHR11119 16 502 1.2E-118 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 PANTHER PTHR11119:SF3 16 502 1.2E-118 T 26-04-2016 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 TIGRFAM TIGR03173 pbuX: xanthine permease 27 437 1.5E-152 T 26-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 Pfam PF00860 Permease family 25 404 3.5E-90 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PAM18_RS10390 a202952b92e27e153994de41e8e16af7 509 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 434 1.6E-100 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 SMART SM00382 26 214 1.1E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 PANTHER PTHR24220 3 253 1.5E-95 T 26-04-2016 PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 PANTHER PTHR24220:SF558 3 253 1.5E-95 T 26-04-2016 PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 Gene3D G3DSA:3.40.50.300 3 237 1.3E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 SUPERFAMILY SSF52540 2 227 1.04E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24645 564a7d280a6b1a5796b06a0cd10383c3 255 Pfam PF00005 ABC transporter 17 167 3.8E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS24015 57648571effecb826468a75fad8e8778 67 PANTHER PTHR38453:SF1 1 67 9.6E-42 T 26-04-2016 PAM18_RS24015 57648571effecb826468a75fad8e8778 67 PANTHER PTHR38453 1 67 9.6E-42 T 26-04-2016 PAM18_RS24015 57648571effecb826468a75fad8e8778 67 Pfam PF04328 Protein of unknown function (DUF466) 5 67 1.7E-30 T 26-04-2016 IPR007423 Protein of unknown function DUF466 PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 PANTHER PTHR22550 1 324 9.3E-165 T 26-04-2016 PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 SMART SM00327 89 289 1.3E-23 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 PANTHER PTHR22550:SF12 1 324 9.3E-165 T 26-04-2016 PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 Pfam PF00092 von Willebrand factor type A domain 91 282 1.1E-32 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 Gene3D G3DSA:3.40.50.410 87 284 5.0E-28 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS09715 bc86ebf9441b33de9c353651d515264d 340 SUPERFAMILY SSF53300 86 266 1.63E-38 T 26-04-2016 IPR002035 von Willebrand factor, type A PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.10.10.10 4 67 1.9E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 PANTHER PTHR11751:SF283 1 93 2.2E-26 T 26-04-2016 PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00895 77 201 5.6E-23 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF48008 74 210 1.31E-28 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00345 9 67 2.5E-12 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.20.120.530 70 209 5.9E-29 T 26-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF07729 FCD domain 77 198 1.1E-26 T 26-04-2016 IPR011711 GntR, C-terminal PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-17 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF46785 4 71 5.82E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28860 9098f33bb7a1698ecd0f1b4487a6d4f6 226 PANTHER PTHR11751 1 93 2.2E-26 T 26-04-2016 PAM18_RS22140 98bc65b1ba06ef3b27eec903ccdbd6b8 301 Pfam PF04116 Fatty acid hydroxylase superfamily 111 244 4.0E-21 T 26-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PAM18_RS22140 98bc65b1ba06ef3b27eec903ccdbd6b8 301 PANTHER PTHR11863:SF2 13 244 4.4E-38 T 26-04-2016 PAM18_RS22140 98bc65b1ba06ef3b27eec903ccdbd6b8 301 PANTHER PTHR11863 13 244 4.4E-38 T 26-04-2016 PAM18_RS20360 0f27bc680073fabfcf44af61a0395f97 174 PANTHER PTHR34584:SF1 3 171 4.7E-59 T 26-04-2016 PAM18_RS20360 0f27bc680073fabfcf44af61a0395f97 174 PIRSF PIRSF019239 10 174 5.4E-43 T 26-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PAM18_RS20360 0f27bc680073fabfcf44af61a0395f97 174 Pfam PF01899 Na+/H+ ion antiporter subunit 21 168 2.8E-43 T 26-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PAM18_RS20360 0f27bc680073fabfcf44af61a0395f97 174 PANTHER PTHR34584 3 171 4.7E-59 T 26-04-2016 PAM18_RS27900 581da0fe7d6f55eb96fa6e446ac151a0 206 PANTHER PTHR30086:SF13 2 202 3.4E-94 T 26-04-2016 PAM18_RS27900 581da0fe7d6f55eb96fa6e446ac151a0 206 Pfam PF01810 LysE type translocator 15 203 6.9E-19 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS27900 581da0fe7d6f55eb96fa6e446ac151a0 206 PANTHER PTHR30086 2 202 3.4E-94 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS19265 4a0fa94db6cd000b7ea21aef1872e590 50 Gene3D G3DSA:1.10.10.10 2 32 7.3E-9 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19265 4a0fa94db6cd000b7ea21aef1872e590 50 Pfam PF08279 HTH domain 2 32 1.4E-7 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 Pfam PF08021 Siderophore-interacting FAD-binding domain 29 145 1.1E-39 T 26-04-2016 IPR013113 FAD-binding 9, siderophore-interacting PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 Gene3D G3DSA:2.40.30.10 21 144 3.1E-33 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 PANTHER PTHR30157 11 238 2.0E-132 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 PANTHER PTHR30157 268 318 2.0E-132 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 Pfam PF04954 Siderophore-interacting protein 162 314 9.7E-38 T 26-04-2016 IPR007037 Siderophore-interacting protein PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 Gene3D G3DSA:3.40.50.80 155 315 4.4E-41 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 PANTHER PTHR30157:SF0 11 238 2.0E-132 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 PANTHER PTHR30157:SF0 268 318 2.0E-132 T 26-04-2016 PAM18_RS15440 9aa20626249090679f7f7e2f157e4740 318 SUPERFAMILY SSF63380 21 144 4.31E-11 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 PAM18_RS06440 fd61b0c7d6745cb6d8f13d681509127e 132 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 118 9.9E-34 T 26-04-2016 PAM18_RS06440 fd61b0c7d6745cb6d8f13d681509127e 132 PANTHER PTHR38013 1 128 1.6E-49 T 26-04-2016 PAM18_RS04945 5dec418e6eecf9313b0989b71b9ae05e 130 Gene3D G3DSA:1.10.490.10 1 128 4.4E-42 T 26-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 PAM18_RS04945 5dec418e6eecf9313b0989b71b9ae05e 130 SUPERFAMILY SSF46458 5 130 3.2E-34 T 26-04-2016 IPR009050 Globin-like PAM18_RS24570 16b6da9ed464c73a9948872794a3ea00 202 Pfam PF01794 Ferric reductase like transmembrane component 43 154 5.4E-16 T 26-04-2016 IPR013130 Ferric reductase transmembrane component-like domain PAM18_RS24570 16b6da9ed464c73a9948872794a3ea00 202 PANTHER PTHR36964 2 202 2.2E-73 T 26-04-2016 PAM18_RS24570 16b6da9ed464c73a9948872794a3ea00 202 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 197 24.604 T 26-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 SUPERFAMILY SSF50475 203 272 4.8E-7 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 167 262 9.2E-13 T 26-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 37 123 8.8E-10 T 26-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 PANTHER PTHR30212 4 300 1.8E-115 T 26-04-2016 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 Gene3D G3DSA:2.30.110.10 34 123 6.0E-5 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 Gene3D G3DSA:2.30.110.10 167 260 1.2E-7 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 PAM18_RS09885 88949f1bfb7736e19d390c02f786f678 310 PANTHER PTHR30212:SF3 4 300 1.8E-115 T 26-04-2016 PAM18_RS14900 c4dc105852722a2f5dd1285ee63cdec3 129 Gene3D G3DSA:3.40.50.2300 6 122 1.8E-13 T 26-04-2016 PAM18_RS14900 c4dc105852722a2f5dd1285ee63cdec3 129 Pfam PF00072 Response regulator receiver domain 9 116 5.3E-6 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS14900 c4dc105852722a2f5dd1285ee63cdec3 129 SUPERFAMILY SSF52172 7 121 5.83E-14 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.40.640.10 70 316 8.7E-87 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.90.1150.10 319 425 3.8E-38 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.90.1150.10 2 69 3.8E-38 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 4.0E-192 T 26-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 PANTHER PTHR11986:SF5 1 427 6.0E-231 T 26-04-2016 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 Pfam PF00202 Aminotransferase class-III 33 395 1.1E-75 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 SUPERFAMILY SSF53383 2 424 8.21E-135 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 PANTHER PTHR11986 1 427 6.0E-231 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS04890 8f5a4b53820691c6984dee37afd8901b 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.701 T 26-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 SUPERFAMILY SSF51219 6 235 3.14E-84 T 26-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 PANTHER PTHR31801:SF3 3 234 2.2E-106 T 26-04-2016 PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 PANTHER PTHR31801 3 234 2.2E-106 T 26-04-2016 PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 Pfam PF01987 Mitochondrial biogenesis AIM24 8 222 8.6E-65 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 6 224 1.6E-40 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 PAM18_RS06330 dc0bc1f05ebed1f6c229d087c79cebb8 248 Gene3D G3DSA:3.60.160.10 1 239 1.4E-103 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 PAM18_RS19135 e02e7f97573d470d7f30bc041d128764 424 PANTHER PTHR35093 1 424 1.4E-169 T 26-04-2016 PAM18_RS19135 e02e7f97573d470d7f30bc041d128764 424 PANTHER PTHR35093:SF2 1 424 1.4E-169 T 26-04-2016 PAM18_RS19135 e02e7f97573d470d7f30bc041d128764 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 424 4.2E-135 T 26-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) PAM18_RS19135 e02e7f97573d470d7f30bc041d128764 424 Gene3D G3DSA:2.40.160.60 24 424 3.0E-117 T 26-04-2016 PAM18_RS19135 e02e7f97573d470d7f30bc041d128764 424 SUPERFAMILY SSF56935 24 424 9.77E-92 T 26-04-2016 PAM18_RS01160 ddda8bc5e2fd850ca778f3d212c2bd91 277 SUPERFAMILY SSF111364 23 276 1.2E-51 T 26-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PAM18_RS01160 ddda8bc5e2fd850ca778f3d212c2bd91 277 Gene3D G3DSA:2.40.230.20 20 262 6.5E-24 T 26-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PAM18_RS16020 28d7e2ef630acd68efda07e4298d1d2a 515 Pfam PF13556 PucR C-terminal helix-turn-helix domain 429 487 7.6E-19 T 26-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain PAM18_RS16020 28d7e2ef630acd68efda07e4298d1d2a 515 PANTHER PTHR33744:SF3 2 497 5.1E-153 T 26-04-2016 PAM18_RS16020 28d7e2ef630acd68efda07e4298d1d2a 515 Pfam PF07905 Purine catabolism regulatory protein-like family 8 123 2.3E-31 T 26-04-2016 IPR012914 Purine catabolism PurC-like domain PAM18_RS16020 28d7e2ef630acd68efda07e4298d1d2a 515 PANTHER PTHR33744 2 497 5.1E-153 T 26-04-2016 PAM18_RS07415 3a2fea79c4a65815e0ffee9d7146b091 474 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 64 325 1.3E-86 T 26-04-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PAM18_RS07415 3a2fea79c4a65815e0ffee9d7146b091 474 Pfam PF16824 C-terminal carbohydrate-binding module 346 465 2.1E-57 T 26-04-2016 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PAM18_RS22090 d7d24683afccd7fd9493277ec21d7a42 168 SUPERFAMILY SSF55729 1 148 2.92E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS22090 d7d24683afccd7fd9493277ec21d7a42 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 5.0E-10 T 26-04-2016 PAM18_RS22090 d7d24683afccd7fd9493277ec21d7a42 168 PANTHER PTHR23091:SF237 1 150 1.6E-34 T 26-04-2016 PAM18_RS22090 d7d24683afccd7fd9493277ec21d7a42 168 Gene3D G3DSA:3.40.630.30 1 130 1.5E-20 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS22090 d7d24683afccd7fd9493277ec21d7a42 168 PANTHER PTHR23091 1 150 1.6E-34 T 26-04-2016 PAM18_RS18200 8d35fb4644a054036f6911b7d9bbf22c 116 Gene3D G3DSA:3.30.70.1060 1 115 3.4E-39 T 26-04-2016 PAM18_RS18200 8d35fb4644a054036f6911b7d9bbf22c 116 PANTHER PTHR35174:SF3 2 116 1.3E-47 T 26-04-2016 PAM18_RS18200 8d35fb4644a054036f6911b7d9bbf22c 116 Pfam PF03795 YCII-related domain 1 116 8.0E-31 T 26-04-2016 IPR005545 YCII-related PAM18_RS18200 8d35fb4644a054036f6911b7d9bbf22c 116 PANTHER PTHR35174 2 116 1.3E-47 T 26-04-2016 PAM18_RS18200 8d35fb4644a054036f6911b7d9bbf22c 116 SUPERFAMILY SSF54909 1 116 1.15E-36 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF69065 4 158 9.07E-50 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00535 20 148 1.8E-59 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:1.10.1520.10 5 141 3.2E-47 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00358 155 223 7.1E-16 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF14622 Ribonuclease-III-like 18 139 6.7E-35 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 2.4E-69 T 26-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF00035 Double-stranded RNA binding motif 155 219 1.6E-7 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:3.30.160.20 152 223 1.8E-21 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.116 T 26-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF54768 108 226 5.79E-26 T 26-04-2016 PAM18_RS21790 8a85b935615972fe6aafaebefd54bc09 229 PANTHER PTHR11207 2 219 5.7E-92 T 26-04-2016 PAM18_RS26655 e3026d213a9c846b27e16cbc890f883e 480 PIRSF PIRSF002744 1 464 3.3E-100 T 26-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PAM18_RS26655 e3026d213a9c846b27e16cbc890f883e 480 PANTHER PTHR31806:SF1 6 466 7.4E-148 T 26-04-2016 PAM18_RS26655 e3026d213a9c846b27e16cbc890f883e 480 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 440 1.6E-45 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS26655 e3026d213a9c846b27e16cbc890f883e 480 PANTHER PTHR31806 6 466 7.4E-148 T 26-04-2016 PAM18_RS25155 32f3d3775658042b133de4baab33aa58 465 PANTHER PTHR11785:SF390 1 391 4.9E-235 T 26-04-2016 PAM18_RS25155 32f3d3775658042b133de4baab33aa58 465 PIRSF PIRSF006060 1 458 8.1E-72 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS25155 32f3d3775658042b133de4baab33aa58 465 PANTHER PTHR11785 1 391 4.9E-235 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS25155 32f3d3775658042b133de4baab33aa58 465 Pfam PF13520 Amino acid permease 14 435 3.7E-52 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PANTHER PTHR11910 8 177 4.5E-53 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.8E-24 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.8E-24 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 3.8E-24 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 3.8E-24 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.8E-24 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.687 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 4.6E-56 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 3.9E-49 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 Gene3D G3DSA:1.10.520.20 2 106 2.4E-32 T 26-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PAM18_RS29055 94409f5629df26021006a6f972a216d7 178 SUPERFAMILY SSF47928 3 105 4.84E-25 T 26-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PAM18_RS07190 b0ce2c5741ecc1dd9cfd9a12dc35929f 415 PANTHER PTHR34596 7 415 1.6E-170 T 26-04-2016 PAM18_RS07190 b0ce2c5741ecc1dd9cfd9a12dc35929f 415 Pfam PF03573 outer membrane porin, OprD family 24 413 2.8E-147 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS07190 b0ce2c5741ecc1dd9cfd9a12dc35929f 415 Gene3D G3DSA:2.40.160.10 29 415 1.5E-137 T 26-04-2016 IPR023614 Porin domain PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 Gene3D G3DSA:3.40.50.150 56 246 2.0E-25 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 Pfam PF08241 Methyltransferase domain 68 162 3.9E-16 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 SUPERFAMILY SSF53335 55 201 6.02E-27 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 PANTHER PTHR10108 17 34 7.1E-77 T 26-04-2016 PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 PANTHER PTHR10108 53 203 7.1E-77 T 26-04-2016 PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 PANTHER PTHR10108:SF330 17 34 7.1E-77 T 26-04-2016 PAM18_RS11945 e7831c7472d754bf76a418611e7d06f9 269 PANTHER PTHR10108:SF330 53 203 7.1E-77 T 26-04-2016 PAM18_RS00370 9f2360074aea5e201999eaf187e936ba 399 PANTHER PTHR30489 1 193 6.9E-30 T 26-04-2016 PAM18_RS00370 9f2360074aea5e201999eaf187e936ba 399 PANTHER PTHR30489 210 399 6.9E-30 T 26-04-2016 PAM18_RS00370 9f2360074aea5e201999eaf187e936ba 399 Pfam PF02687 FtsX-like permease family 275 391 4.1E-8 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 PAM18_RS05585 59a7228d915e6b20ecc57cfb6f4832ec 296 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 2.5E-31 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS05585 59a7228d915e6b20ecc57cfb6f4832ec 296 PANTHER PTHR32196:SF27 1 294 1.5E-150 T 26-04-2016 PAM18_RS05585 59a7228d915e6b20ecc57cfb6f4832ec 296 PANTHER PTHR32196 1 294 1.5E-150 T 26-04-2016 PAM18_RS27020 1e65914c30b94322be4e074e5c44ae77 331 PANTHER PTHR33376:SF7 1 331 1.8E-186 T 26-04-2016 PAM18_RS27020 1e65914c30b94322be4e074e5c44ae77 331 PANTHER PTHR33376 1 331 1.8E-186 T 26-04-2016 PAM18_RS27020 1e65914c30b94322be4e074e5c44ae77 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.0E-113 T 26-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PAM18_RS27020 1e65914c30b94322be4e074e5c44ae77 331 PIRSF PIRSF006470 1 330 2.7E-133 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS27020 1e65914c30b94322be4e074e5c44ae77 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 272 3.4E-82 T 26-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PAM18_RS04555 63d5584853e6585a69fa176334c30b6c 265 Gene3D G3DSA:3.40.50.1980 19 137 7.6E-28 T 26-04-2016 PAM18_RS04555 63d5584853e6585a69fa176334c30b6c 265 SUPERFAMILY SSF53807 19 261 3.92E-52 T 26-04-2016 PAM18_RS04555 63d5584853e6585a69fa176334c30b6c 265 Gene3D G3DSA:3.40.50.1980 141 261 7.1E-32 T 26-04-2016 PAM18_RS04555 63d5584853e6585a69fa176334c30b6c 265 PANTHER PTHR30535 19 261 3.4E-50 T 26-04-2016 PAM18_RS04555 63d5584853e6585a69fa176334c30b6c 265 Pfam PF01497 Periplasmic binding protein 22 216 3.2E-23 T 26-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 PAM18_RS01555 79c17e189ecb23314f2a2c1f9fc6f853 209 PANTHER PTHR12907:SF14 10 206 2.0E-84 T 26-04-2016 PAM18_RS01555 79c17e189ecb23314f2a2c1f9fc6f853 209 PANTHER PTHR12907 10 206 2.0E-84 T 26-04-2016 PAM18_RS01555 79c17e189ecb23314f2a2c1f9fc6f853 209 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 111 199 2.6E-19 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS01555 79c17e189ecb23314f2a2c1f9fc6f853 209 SMART SM00702 20 199 3.7E-38 T 26-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 PAM18_RS11085 5faf83e22cb4b367f98830437877661a 247 SUPERFAMILY SSF56784 11 236 5.5E-28 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS11085 5faf83e22cb4b367f98830437877661a 247 Gene3D G3DSA:3.40.50.1000 87 235 3.9E-11 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS11085 5faf83e22cb4b367f98830437877661a 247 Gene3D G3DSA:3.40.50.1000 10 29 3.9E-11 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.8E-56 T 26-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 SUPERFAMILY SSF46955 1 113 3.48E-37 T 26-04-2016 IPR009061 Putative DNA-binding domain PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 Pfam PF13411 MerR HTH family regulatory protein 1 68 6.3E-22 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 SMART SM00422 1 70 4.2E-31 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-9 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-9 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-9 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 PANTHER PTHR30204:SF18 1 112 4.9E-52 T 26-04-2016 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 PANTHER PTHR30204 1 112 4.9E-52 T 26-04-2016 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 Gene3D G3DSA:1.10.1660.10 1 55 1.1E-27 T 26-04-2016 PAM18_RS06365 ef015ded9b6cd07cb520a788897ad77b 156 Gene3D G3DSA:1.10.1660.10 56 131 9.0E-27 T 26-04-2016 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.806 T 26-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 26-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 4.2E-73 T 26-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 SUPERFAMILY SSF69765 1 155 5.63E-67 T 26-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 Gene3D G3DSA:3.30.1330.50 1 155 9.4E-73 T 26-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 PANTHER PTHR32125 1 157 3.0E-62 T 26-04-2016 PAM18_RS06675 82ad9b3cab8e9740db15894802fe13ea 157 Pfam PF02542 YgbB family 1 154 9.3E-68 T 26-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 PAM18_RS28775 9a1429e14c8c8b76fb3c5335a42df514 250 PIRSF PIRSF029730 6 250 9.7E-94 T 26-04-2016 IPR011227 Uncharacterised conserved protein UCP029730 PAM18_RS28775 9a1429e14c8c8b76fb3c5335a42df514 250 Gene3D G3DSA:3.40.630.40 18 249 5.9E-74 T 26-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 PAM18_RS28775 9a1429e14c8c8b76fb3c5335a42df514 250 SUPERFAMILY SSF53187 12 250 5.34E-68 T 26-04-2016 PAM18_RS28775 9a1429e14c8c8b76fb3c5335a42df514 250 Pfam PF05013 N-formylglutamate amidohydrolase 27 231 2.8E-39 T 26-04-2016 IPR007709 N-formylglutamate amidohydrolase PAM18_RS16240 ac28beca9b3cd1f5eb5fea0951414d25 263 Pfam PF12787 EcsC protein family 8 243 3.2E-39 T 26-04-2016 IPR024787 EcsC protein PAM18_RS24165 29613d44cd572b5f82abcc64919f5cde 204 SUPERFAMILY SSF143081 3 199 1.7E-43 T 26-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS24165 29613d44cd572b5f82abcc64919f5cde 204 Gene3D G3DSA:3.90.1680.10 5 203 7.0E-42 T 26-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS24165 29613d44cd572b5f82abcc64919f5cde 204 PANTHER PTHR13604 3 203 1.4E-50 T 26-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS24165 29613d44cd572b5f82abcc64919f5cde 204 Pfam PF02586 SOS response associated peptidase (SRAP) 1 190 2.9E-34 T 26-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS28255 93007fe4361aea1400aa258f50cf810f 96 SUPERFAMILY SSF102829 10 93 7.32E-16 T 26-04-2016 IPR007838 Cell division protein ZapA-like PAM18_RS28255 93007fe4361aea1400aa258f50cf810f 96 Pfam PF05164 Cell division protein ZapA 9 91 7.6E-13 T 26-04-2016 IPR007838 Cell division protein ZapA-like PAM18_RS01935 e0bbd7434033d17551dcd0fd6beb440c 448 Gene3D G3DSA:2.50.20.10 337 445 5.0E-35 T 26-04-2016 PAM18_RS01935 e0bbd7434033d17551dcd0fd6beb440c 448 Gene3D G3DSA:2.50.20.10 157 304 5.0E-35 T 26-04-2016 PAM18_RS01935 e0bbd7434033d17551dcd0fd6beb440c 448 Pfam PF07044 Protein of unknown function (DUF1329) 82 444 3.3E-139 T 26-04-2016 IPR010752 Protein of unknown function DUF1329 PAM18_RS15590 e129f1b84f5b5a0b1d1d87221089efb2 463 PANTHER PTHR30354:SF7 1 463 2.1E-264 T 26-04-2016 PAM18_RS15590 e129f1b84f5b5a0b1d1d87221089efb2 463 PANTHER PTHR30354 1 463 2.1E-264 T 26-04-2016 PAM18_RS07400 ad1060c33f6178afa57079935796a7f7 391 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 85 355 2.4E-99 T 26-04-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 SUPERFAMILY SSF47741 92 163 2.22E-30 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 SUPERFAMILY SSF54292 9 96 1.44E-25 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 Pfam PF01799 [2Fe-2S] binding domain 81 153 4.2E-31 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 67 1.8E-7 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 Gene3D G3DSA:3.10.20.30 10 82 1.1E-29 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 PANTHER PTHR11908:SF66 7 154 1.5E-38 T 26-04-2016 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 PANTHER PTHR11908 7 154 1.5E-38 T 26-04-2016 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 Gene3D G3DSA:1.10.150.120 83 158 3.0E-33 T 26-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 PAM18_RS15935 ed221df8e0f53a268803028af21cb1bb 170 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 26-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PAM18_RS27300 b4f445676af8498b3b6b7ec26806af50 160 Pfam PF14539 Domain of unknown function (DUF4442) 9 150 3.1E-30 T 26-04-2016 IPR027961 Protein of unknown function DUF4442 PAM18_RS27300 b4f445676af8498b3b6b7ec26806af50 160 Gene3D G3DSA:3.10.129.10 8 154 2.2E-43 T 26-04-2016 IPR029069 HotDog domain PAM18_RS27300 b4f445676af8498b3b6b7ec26806af50 160 SUPERFAMILY SSF54637 11 151 3.69E-25 T 26-04-2016 IPR029069 HotDog domain PAM18_RS28725 f39b2fc03d9319e97053cf254b469b03 167 SUPERFAMILY SSF46785 29 159 4.25E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS28725 f39b2fc03d9319e97053cf254b469b03 167 PANTHER PTHR33202 10 166 2.6E-78 T 26-04-2016 PAM18_RS28725 f39b2fc03d9319e97053cf254b469b03 167 Pfam PF01475 Ferric uptake regulator family 35 154 1.2E-11 T 26-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PAM18_RS28725 f39b2fc03d9319e97053cf254b469b03 167 PANTHER PTHR33202:SF6 10 166 2.6E-78 T 26-04-2016 PAM18_RS28725 f39b2fc03d9319e97053cf254b469b03 167 Gene3D G3DSA:1.10.10.10 27 96 1.3E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS00305 35892bb328e39488aebd106380509650 141 PANTHER PTHR33797:SF1 1 141 9.7E-64 T 26-04-2016 PAM18_RS00305 35892bb328e39488aebd106380509650 141 Pfam PF02566 OsmC-like protein 43 135 5.4E-20 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS00305 35892bb328e39488aebd106380509650 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 137 3.1E-64 T 26-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 PAM18_RS00305 35892bb328e39488aebd106380509650 141 Gene3D G3DSA:3.30.300.20 1 139 3.2E-54 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta PAM18_RS00305 35892bb328e39488aebd106380509650 141 SUPERFAMILY SSF82784 2 139 1.44E-41 T 26-04-2016 IPR003718 OsmC/Ohr family PAM18_RS00305 35892bb328e39488aebd106380509650 141 PANTHER PTHR33797 1 141 9.7E-64 T 26-04-2016 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 PANTHER PTHR34595 3 832 0.0 T 26-04-2016 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 462 6.2E-155 T 26-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 511 819 1.5E-72 T 26-04-2016 IPR007296 Domain of unknown function DUF403 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 SUPERFAMILY SSF56059 23 219 1.91E-23 T 26-04-2016 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 SUPERFAMILY SSF56059 326 418 1.91E-23 T 26-04-2016 PAM18_RS25780 35d2ea60c2eac2f873d1fde5e0692b89 832 PANTHER PTHR34595:SF1 3 832 0.0 T 26-04-2016 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SUPERFAMILY SSF48452 472 584 2.82E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SUPERFAMILY SSF48452 466 810 9.1E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 ProSitePatterns PS00622 LuxR-type HTH domain signature. 859 886 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SMART SM00421 842 899 4.5E-22 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 Pfam PF00196 Bacterial regulatory proteins, luxR family 844 898 1.2E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 859 875 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 845 859 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 875 887 1.1E-10 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SUPERFAMILY SSF46894 835 905 4.76E-20 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SUPERFAMILY SSF52540 145 248 2.71E-9 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 SUPERFAMILY SSF52540 29 111 2.71E-9 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 Gene3D G3DSA:1.10.10.10 843 905 7.0E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS05175 84db2ed315d4568263a74d313aefd064 906 Gene3D G3DSA:1.25.40.10 461 820 6.3E-50 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 SUPERFAMILY SSF51735 334 364 5.23E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 SUPERFAMILY SSF51735 17 304 5.23E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 Gene3D G3DSA:3.40.50.720 18 292 1.0E-31 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 PANTHER PTHR10366 332 370 2.4E-97 T 26-04-2016 PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 PANTHER PTHR10366 18 304 2.4E-97 T 26-04-2016 PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 Pfam PF07993 Male sterility protein 21 253 6.3E-30 T 26-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 PANTHER PTHR10366:SF382 332 370 2.4E-97 T 26-04-2016 PAM18_RS17870 ca75bfba21ba7e822858af72eb602804 385 PANTHER PTHR10366:SF382 18 304 2.4E-97 T 26-04-2016 PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 SUPERFAMILY SSF103473 5 384 1.31E-33 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 PANTHER PTHR23534 1 389 1.3E-104 T 26-04-2016 PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 Gene3D G3DSA:1.20.1250.20 4 191 4.6E-9 T 26-04-2016 PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 Gene3D G3DSA:1.20.1250.20 205 385 2.7E-19 T 26-04-2016 PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 Pfam PF07690 Major Facilitator Superfamily 11 240 2.3E-9 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS16365 f9a7e8df682ac6503c8626292fcc05fc 389 Pfam PF07690 Major Facilitator Superfamily 252 380 2.1E-12 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 Gene3D G3DSA:3.30.700.10 8 113 1.8E-18 T 26-04-2016 PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 117 8.3E-26 T 26-04-2016 IPR031982 Type IV minor pilin ComP PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 6.0E-9 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 3 27 3.0E-8 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 PANTHER PTHR30093 1 61 1.4E-31 T 26-04-2016 PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 PANTHER PTHR30093:SF4 1 61 1.4E-31 T 26-04-2016 PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23760 f824c43af10d92bff21fa0a0d160271b 141 SUPERFAMILY SSF54523 8 126 5.76E-23 T 26-04-2016 PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.8E-28 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.4E-31 T 26-04-2016 IPR018076 Type II secretion system F domain PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.0E-29 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.0E-29 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.0E-29 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.0E-29 T 26-04-2016 IPR003004 GspF/PilC family PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PANTHER PTHR30012:SF5 2 404 5.9E-260 T 26-04-2016 PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 PANTHER PTHR30012 2 404 5.9E-260 T 26-04-2016 PAM18_RS22220 29bee192bdd8266b5646c8cfe7e82baa 404 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 2.5E-173 T 26-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 SUPERFAMILY SSF46785 5 88 1.84E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 Gene3D G3DSA:3.40.190.10 84 178 2.1E-9 T 26-04-2016 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 PANTHER PTHR30126 3 290 5.1E-105 T 26-04-2016 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 Gene3D G3DSA:1.10.10.10 6 83 7.1E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.3E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 Pfam PF03466 LysR substrate binding domain 88 292 1.1E-25 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 SUPERFAMILY SSF53850 89 293 2.17E-26 T 26-04-2016 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 Gene3D G3DSA:3.40.190.10 179 256 4.2E-10 T 26-04-2016 PAM18_RS11350 c85e9e793ff00086a009a2d82f123802 295 PANTHER PTHR30126:SF29 3 290 5.1E-105 T 26-04-2016 PAM18_RS02970 f999deacbb78c423e3239d7feda19bca 517 PANTHER PTHR30029:SF2 2 505 2.0E-236 T 26-04-2016 PAM18_RS02970 f999deacbb78c423e3239d7feda19bca 517 Pfam PF04293 SpoVR like protein 12 443 3.9E-178 T 26-04-2016 IPR007390 Sporulation stage V, protein R PAM18_RS02970 f999deacbb78c423e3239d7feda19bca 517 PANTHER PTHR30029 2 505 2.0E-236 T 26-04-2016 PAM18_RS05795 25764d6f2b2403b43aa9c0f5a8bacfeb 195 Pfam PF06078 Bacterial protein of unknown function (DUF937) 37 177 8.2E-19 T 26-04-2016 IPR009282 Protein of unknown function DUF937 PAM18_RS05795 25764d6f2b2403b43aa9c0f5a8bacfeb 195 SUPERFAMILY SSF140804 73 184 2.22E-27 T 26-04-2016 IPR027405 YidB-like PAM18_RS05795 25764d6f2b2403b43aa9c0f5a8bacfeb 195 Gene3D G3DSA:1.10.10.690 73 184 1.4E-33 T 26-04-2016 IPR027405 YidB-like PAM18_RS04735 86d1d1ca944804b81bb2139f04f5e3a1 285 Gene3D G3DSA:3.40.50.150 66 207 7.2E-18 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS04735 86d1d1ca944804b81bb2139f04f5e3a1 285 Pfam PF04072 Leucine carboxyl methyltransferase 60 180 7.5E-16 T 26-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- PAM18_RS04735 86d1d1ca944804b81bb2139f04f5e3a1 285 SUPERFAMILY SSF53335 27 260 6.13E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS11310 e7fa125f34afcfa1079fd442a4baa5b0 231 PANTHER PTHR10992:SF832 3 228 1.7E-48 T 26-04-2016 PAM18_RS11310 e7fa125f34afcfa1079fd442a4baa5b0 231 PANTHER PTHR10992 3 228 1.7E-48 T 26-04-2016 PAM18_RS11310 e7fa125f34afcfa1079fd442a4baa5b0 231 Gene3D G3DSA:3.40.50.1820 5 225 9.4E-29 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11310 e7fa125f34afcfa1079fd442a4baa5b0 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 1.5E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS11310 e7fa125f34afcfa1079fd442a4baa5b0 231 SUPERFAMILY SSF53474 2 224 1.54E-25 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 Gene3D G3DSA:1.10.287.950 428 645 7.7E-53 T 26-04-2016 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 PANTHER PTHR32089:SF43 314 677 7.2E-143 T 26-04-2016 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 SMART SM00283 413 674 2.0E-96 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 4.2E-20 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.2E-20 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 4.2E-20 T 26-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 476 673 1.4E-48 T 26-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 PANTHER PTHR32089 314 677 7.2E-143 T 26-04-2016 PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 148 7.0E-26 T 26-04-2016 IPR029095 NarX-like, N-terminal PAM18_RS02080 5797163efe7734cd5454190d8b7d54e7 682 SUPERFAMILY SSF58104 374 675 2.09E-67 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 Pfam PF01734 Patatin-like phospholipase 7 163 3.9E-16 T 26-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 Gene3D G3DSA:3.40.1090.10 7 165 9.7E-8 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 PANTHER PTHR14226:SF24 3 185 8.9E-103 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 PANTHER PTHR14226:SF24 241 343 8.9E-103 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 PANTHER PTHR14226 3 185 8.9E-103 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 PANTHER PTHR14226 241 343 8.9E-103 T 26-04-2016 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 SUPERFAMILY SSF52151 239 339 1.18E-49 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS17465 50e0f67a6a206e113478a94d53f320e5 345 SUPERFAMILY SSF52151 3 178 1.18E-49 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS24255 674717223d7f4eea4fb76cbcc15f0b79 180 Pfam PF05229 Spore Coat Protein U domain 31 177 2.7E-36 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24255 674717223d7f4eea4fb76cbcc15f0b79 180 PANTHER PTHR37089:SF3 1 180 6.3E-117 T 26-04-2016 PAM18_RS24255 674717223d7f4eea4fb76cbcc15f0b79 180 SMART SM00972 119 177 7.4E-22 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24255 674717223d7f4eea4fb76cbcc15f0b79 180 PANTHER PTHR37089 1 180 6.3E-117 T 26-04-2016 PAM18_RS18945 b2c7ecdfbca88e15372fdd570644da63 143 SUPERFAMILY SSF55729 1 141 2.92E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18945 b2c7ecdfbca88e15372fdd570644da63 143 Gene3D G3DSA:3.40.630.30 1 127 3.0E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS18945 b2c7ecdfbca88e15372fdd570644da63 143 Pfam PF13673 Acetyltransferase (GNAT) domain 50 130 3.1E-16 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS18945 b2c7ecdfbca88e15372fdd570644da63 143 PANTHER PTHR23091:SF240 1 126 1.6E-38 T 26-04-2016 PAM18_RS18945 b2c7ecdfbca88e15372fdd570644da63 143 PANTHER PTHR23091 1 126 1.6E-38 T 26-04-2016 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 PANTHER PTHR19384 1 148 7.2E-19 T 26-04-2016 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 SUPERFAMILY SSF52218 1 148 7.04E-36 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 Pfam PF00258 Flavodoxin 5 140 6.8E-20 T 26-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 83 93 2.9E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 52 63 2.9E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 4 17 2.9E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 108 127 2.9E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 PAM18_RS07870 7793a0e52a79c28d57d6fb190949bafd 150 Gene3D G3DSA:3.40.50.360 1 149 2.2E-32 T 26-04-2016 IPR029039 Flavoprotein-like domain PAM18_RS22130 d602d37de896e990bb70406479d3e8ce 464 PANTHER PTHR11895 4 462 4.4E-172 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22130 d602d37de896e990bb70406479d3e8ce 464 Pfam PF01425 Amidase 28 442 1.4E-89 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22130 d602d37de896e990bb70406479d3e8ce 464 Gene3D G3DSA:3.90.1300.10 3 451 5.6E-120 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS22130 d602d37de896e990bb70406479d3e8ce 464 PANTHER PTHR11895:SF66 4 462 4.4E-172 T 26-04-2016 PAM18_RS22130 d602d37de896e990bb70406479d3e8ce 464 SUPERFAMILY SSF75304 2 451 4.06E-123 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PAM18_RS23905 7c0237e77f3f9980f9e1703fa8f8244b 270 PANTHER PTHR34817:SF2 3 250 2.3E-133 T 26-04-2016 PAM18_RS23905 7c0237e77f3f9980f9e1703fa8f8244b 270 PANTHER PTHR34817 3 250 2.3E-133 T 26-04-2016 PAM18_RS23905 7c0237e77f3f9980f9e1703fa8f8244b 270 Gene3D G3DSA:3.30.460.10 6 85 1.1E-4 T 26-04-2016 PAM18_RS23905 7c0237e77f3f9980f9e1703fa8f8244b 270 Pfam PF10127 Predicted nucleotidyltransferase 13 260 4.5E-92 T 26-04-2016 IPR018775 Nucleotidyltransferase, predicted PAM18_RS06195 4bb98ab3c562126994ae39c2294987b7 368 PANTHER PTHR22893 1 355 2.5E-179 T 26-04-2016 PAM18_RS06195 4bb98ab3c562126994ae39c2294987b7 368 Gene3D G3DSA:3.20.20.70 1 344 5.2E-130 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS06195 4bb98ab3c562126994ae39c2294987b7 368 PANTHER PTHR22893:SF7 1 355 2.5E-179 T 26-04-2016 PAM18_RS06195 4bb98ab3c562126994ae39c2294987b7 368 SUPERFAMILY SSF51395 1 356 1.13E-118 T 26-04-2016 PAM18_RS06195 4bb98ab3c562126994ae39c2294987b7 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 2.6E-71 T 26-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PAM18_RS04135 1b3c4d9eaeed71ec6efce6ce4568a226 267 Gene3D G3DSA:3.90.850.10 2 267 9.8E-87 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04135 1b3c4d9eaeed71ec6efce6ce4568a226 267 PANTHER PTHR30143 1 267 7.2E-98 T 26-04-2016 PAM18_RS04135 1b3c4d9eaeed71ec6efce6ce4568a226 267 SUPERFAMILY SSF56529 3 267 6.28E-78 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS04135 1b3c4d9eaeed71ec6efce6ce4568a226 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.1E-140 T 26-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 PAM18_RS04135 1b3c4d9eaeed71ec6efce6ce4568a226 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 265 1.8E-7 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS11210 957b9469f2d2bac02e5fcd58d96fb23a 114 SUPERFAMILY SSF47413 1 70 6.19E-11 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS11210 957b9469f2d2bac02e5fcd58d96fb23a 114 Gene3D G3DSA:1.10.260.40 1 72 1.3E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS11210 957b9469f2d2bac02e5fcd58d96fb23a 114 SMART SM00530 5 64 9.3E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PAM18_RS11210 957b9469f2d2bac02e5fcd58d96fb23a 114 Pfam PF13560 Helix-turn-helix domain 2 73 8.8E-8 T 26-04-2016 PAM18_RS14265 674ddbd4cae7dfb201bedc6123a5b8fe 238 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 57 211 4.2E-37 T 26-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 PAM18_RS15055 18ae8d57f4c2a4ce8962812018bacbee 158 Pfam PF13628 Domain of unknown function (DUF4142) 24 152 1.6E-21 T 26-04-2016 IPR025419 Domain of unknown function DUF4142 PAM18_RS15055 18ae8d57f4c2a4ce8962812018bacbee 158 PANTHER PTHR38593 1 158 2.3E-81 T 26-04-2016 PAM18_RS15055 18ae8d57f4c2a4ce8962812018bacbee 158 PANTHER PTHR38593:SF2 1 158 2.3E-81 T 26-04-2016 PAM18_RS21960 c8ee9337d83cb7695c24ed821169febe 81 PANTHER PTHR38775 2 80 1.2E-28 T 26-04-2016 PAM18_RS21960 c8ee9337d83cb7695c24ed821169febe 81 Pfam PF06611 Protein of unknown function (DUF1145) 4 58 1.2E-13 T 26-04-2016 IPR009525 Protein of unknown function DUF1145 PAM18_RS21960 c8ee9337d83cb7695c24ed821169febe 81 PANTHER PTHR38775:SF1 2 80 1.2E-28 T 26-04-2016 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 SUPERFAMILY SSF143800 2 77 1.67E-31 T 26-04-2016 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.5E-29 T 26-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 22.188 T 26-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 Gene3D G3DSA:2.30.170.40 2 77 1.2E-37 T 26-04-2016 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 PANTHER PTHR13528 1 69 6.6E-37 T 26-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PAM18_RS27775 1fccd6e3293b7cee4f3434398a7ff5c1 78 Pfam PF00830 Ribosomal L28 family 3 61 9.2E-29 T 26-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 PAM18_RS01355 8177fbe2c2c0e9d7a742f77272f374bc 94 Gene3D G3DSA:3.30.70.900 6 89 3.2E-12 T 26-04-2016 PAM18_RS01355 8177fbe2c2c0e9d7a742f77272f374bc 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 69 2.8E-12 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS01355 8177fbe2c2c0e9d7a742f77272f374bc 94 SUPERFAMILY SSF54909 6 81 6.52E-10 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS24040 6c5b6751f186a9847cbd8e2f4189cc6e 144 Pfam PF05425 Copper resistance protein D 44 134 3.9E-11 T 26-04-2016 IPR008457 Copper resistance protein D GO:0016021 PAM18_RS07090 3cc5ee2e82d95b21cf9aca9e47a67b12 297 PANTHER PTHR30193:SF10 1 292 1.1E-118 T 26-04-2016 PAM18_RS07090 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Gene3D G3DSA:1.10.3720.10 2 282 6.8E-50 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07090 3cc5ee2e82d95b21cf9aca9e47a67b12 297 SUPERFAMILY SSF161098 4 283 1.44E-53 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07090 3cc5ee2e82d95b21cf9aca9e47a67b12 297 PANTHER PTHR30193 1 292 1.1E-118 T 26-04-2016 PAM18_RS07090 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 286 5.7E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 Gene3D G3DSA:3.40.190.100 114 234 5.4E-37 T 26-04-2016 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 SUPERFAMILY SSF53850 23 284 2.03E-74 T 26-04-2016 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 Gene3D G3DSA:3.40.190.10 25 112 8.4E-21 T 26-04-2016 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 274 3.5E-61 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 PANTHER PTHR30177 3 279 8.5E-101 T 26-04-2016 PAM18_RS08900 c5ce7667dec55a63999c294d917ac87b 285 PANTHER PTHR30177:SF0 3 279 8.5E-101 T 26-04-2016 PAM18_RS28520 13421f93e88b949d8fc60f2402ab2449 380 PANTHER PTHR23028:SF69 4 372 8.0E-208 T 26-04-2016 PAM18_RS28520 13421f93e88b949d8fc60f2402ab2449 380 PANTHER PTHR23028 4 372 8.0E-208 T 26-04-2016 PAM18_RS28520 13421f93e88b949d8fc60f2402ab2449 380 Pfam PF01757 Acyltransferase family 7 341 7.3E-27 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 PANTHER PTHR30203 3 464 1.1E-273 T 26-04-2016 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 Pfam PF02321 Outer membrane efflux protein 276 463 2.1E-25 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 Pfam PF02321 Outer membrane efflux protein 58 241 6.0E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 Gene3D G3DSA:1.20.1600.10 54 464 4.3E-76 T 26-04-2016 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 SUPERFAMILY SSF56954 50 465 3.01E-83 T 26-04-2016 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 PIRSF PIRSF001892 1 471 5.4E-166 T 26-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 PAM18_RS04050 42d1107244ff7d86d48f826070dd2601 471 PANTHER PTHR30203:SF8 3 464 1.1E-273 T 26-04-2016 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 SUPERFAMILY SSF81442 9 468 9.55E-122 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 PANTHER PTHR10422:SF21 5 469 0.0 T 26-04-2016 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 PANTHER PTHR10422 5 469 0.0 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 Gene3D G3DSA:1.20.210.10 8 469 1.4E-67 T 26-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 5.1E-112 T 26-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 6.5E-226 T 26-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS17900 a89145b2963255e7c9ff9be5c6981b29 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 26-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 PAM18_RS18610 8e51135fba8de3fe0edabe8121b05122 208 PANTHER PTHR21174 1 208 1.2E-49 T 26-04-2016 IPR009218 Predicted HD phosphohydrolase PAM18_RS18610 8e51135fba8de3fe0edabe8121b05122 208 PIRSF PIRSF035170 1 207 3.1E-81 T 26-04-2016 IPR009218 Predicted HD phosphohydrolase PAM18_RS18610 8e51135fba8de3fe0edabe8121b05122 208 SUPERFAMILY SSF109604 23 194 1.1E-18 T 26-04-2016 PAM18_RS11710 0ae68533ed27187145ec4822bc7b2e1b 108 PANTHER PTHR10438 20 107 2.5E-15 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PAM18_RS11710 0ae68533ed27187145ec4822bc7b2e1b 108 Pfam PF00085 Thioredoxin 19 99 3.1E-14 T 26-04-2016 IPR013766 Thioredoxin domain GO:0045454 PAM18_RS11710 0ae68533ed27187145ec4822bc7b2e1b 108 Gene3D G3DSA:3.40.30.10 17 107 2.1E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS11710 0ae68533ed27187145ec4822bc7b2e1b 108 SUPERFAMILY SSF52833 19 106 7.72E-21 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS15415 458eaf108a17d2dfb9094f4230612ce2 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 98 8.1E-23 T 26-04-2016 IPR008407 Branched-chain amino acid transport, AzlD PAM18_RS10105 f2d904d9cd7171fa7be90fa4ea6d262f 333 PIRSF PIRSF006268 12 325 3.5E-83 T 26-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PAM18_RS10105 f2d904d9cd7171fa7be90fa4ea6d262f 333 SUPERFAMILY SSF143631 20 325 5.49E-95 T 26-04-2016 IPR003374 ApbE-like domain PAM18_RS10105 f2d904d9cd7171fa7be90fa4ea6d262f 333 PANTHER PTHR30040:SF3 1 330 4.4E-166 T 26-04-2016 PAM18_RS10105 f2d904d9cd7171fa7be90fa4ea6d262f 333 PANTHER PTHR30040 1 330 4.4E-166 T 26-04-2016 PAM18_RS10105 f2d904d9cd7171fa7be90fa4ea6d262f 333 Pfam PF02424 ApbE family 26 306 2.1E-80 T 26-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 257 7.0E-43 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 Gene3D G3DSA:3.10.310.10 123 247 9.7E-46 T 26-04-2016 PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 PANTHER PTHR13774 1 259 2.8E-113 T 26-04-2016 PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 Gene3D G3DSA:3.10.310.10 1 122 8.9E-50 T 26-04-2016 PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 PIRSF PIRSF016184 1 259 3.0E-60 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 Pfam PF02567 Phenazine biosynthesis-like protein 8 255 9.1E-63 T 26-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 PANTHER PTHR13774:SF17 1 259 2.8E-113 T 26-04-2016 PAM18_RS11280 7362ea351319fa767d0f6ed147b4806c 259 SUPERFAMILY SSF54506 1 259 2.43E-86 T 26-04-2016 PAM18_RS20725 1b2153766ec55b4d1d89d20e05af729f 134 SUPERFAMILY SSF54637 2 133 1.37E-29 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20725 1b2153766ec55b4d1d89d20e05af729f 134 Gene3D G3DSA:3.10.129.10 1 133 6.5E-32 T 26-04-2016 IPR029069 HotDog domain PAM18_RS20725 1b2153766ec55b4d1d89d20e05af729f 134 Pfam PF03061 Thioesterase superfamily 20 104 1.5E-13 T 26-04-2016 IPR006683 Thioesterase domain PAM18_RS08075 b32b87b9a4e1096ebf8b1f0425174940 275 Pfam PF12679 ABC-2 family transporter protein 5 273 8.7E-38 T 26-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 PAM18_RS08075 b32b87b9a4e1096ebf8b1f0425174940 275 PANTHER PTHR30294:SF26 1 275 1.6E-89 T 26-04-2016 PAM18_RS08075 b32b87b9a4e1096ebf8b1f0425174940 275 PANTHER PTHR30294 1 275 1.6E-89 T 26-04-2016 PAM18_RS11630 20840bd263c9a6bb01631b8936d4a733 204 PIRSF PIRSF006324 1 204 1.5E-53 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS11630 20840bd263c9a6bb01631b8936d4a733 204 PANTHER PTHR30086:SF8 1 204 1.5E-145 T 26-04-2016 PAM18_RS11630 20840bd263c9a6bb01631b8936d4a733 204 PANTHER PTHR30086 1 204 1.5E-145 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS11630 20840bd263c9a6bb01631b8936d4a733 204 Pfam PF01810 LysE type translocator 15 203 1.8E-31 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS25985 260fa6dd7329284221cbea6a2384d797 337 Pfam PF13449 Esterase-like activity of phytase 44 194 3.1E-12 T 26-04-2016 IPR027372 Phytase-like domain PAM18_RS25985 260fa6dd7329284221cbea6a2384d797 337 SUPERFAMILY SSF101898 44 276 2.88E-8 T 26-04-2016 PAM18_RS24965 3917a67786cac8d716c9a28719376cb3 144 PANTHER PTHR12901:SF7 3 144 2.0E-73 T 26-04-2016 PAM18_RS24965 3917a67786cac8d716c9a28719376cb3 144 Gene3D G3DSA:3.30.530.20 4 144 3.2E-47 T 26-04-2016 IPR023393 START-like domain PAM18_RS24965 3917a67786cac8d716c9a28719376cb3 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 8.4E-35 T 26-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain PAM18_RS24965 3917a67786cac8d716c9a28719376cb3 144 PANTHER PTHR12901 3 144 2.0E-73 T 26-04-2016 PAM18_RS24965 3917a67786cac8d716c9a28719376cb3 144 SUPERFAMILY SSF55961 1 144 3.14E-35 T 26-04-2016 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 9.7E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 Gene3D G3DSA:3.40.190.10 178 267 8.2E-21 T 26-04-2016 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 Gene3D G3DSA:1.10.10.10 8 92 6.1E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 PANTHER PTHR30537:SF1 1 299 3.4E-161 T 26-04-2016 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 Gene3D G3DSA:3.40.190.10 97 177 1.3E-7 T 26-04-2016 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 Pfam PF03466 LysR substrate binding domain 94 296 1.7E-42 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 SUPERFAMILY SSF46785 7 88 8.16E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 SUPERFAMILY SSF53850 95 297 1.19E-41 T 26-04-2016 PAM18_RS19940 e8d7f87677ffbbcc9f0189d643e7e8bc 303 PANTHER PTHR30537 1 299 3.4E-161 T 26-04-2016 PAM18_RS17965 40c12cd486a15ac1a64961910edc90a4 278 PANTHER PTHR39456:SF2 2 277 7.3E-171 T 26-04-2016 PAM18_RS17965 40c12cd486a15ac1a64961910edc90a4 278 Pfam PF10118 Predicted metal-dependent hydrolase 16 262 3.1E-91 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS17965 40c12cd486a15ac1a64961910edc90a4 278 PANTHER PTHR39456 2 277 7.3E-171 T 26-04-2016 PAM18_RS17965 40c12cd486a15ac1a64961910edc90a4 278 PIRSF PIRSF007580 1 278 1.0E-102 T 26-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 PAM18_RS17045 45a5933697f40486a93ac72d05c17c1f 112 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 74 112 9.2E-21 T 26-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 PAM18_RS17045 45a5933697f40486a93ac72d05c17c1f 112 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 26 112 8.5E-27 T 26-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 PAM18_RS23740 eff6d461c81e6a93f96925ce0a48d864 274 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 32 2.1E-6 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS23740 eff6d461c81e6a93f96925ce0a48d864 274 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 3.3E-4 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 Pfam PF00164 Ribosomal protein S12/S23 5 123 9.7E-43 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 SUPERFAMILY SSF50249 3 123 3.48E-51 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 Gene3D G3DSA:2.40.50.140 1 123 1.2E-64 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.4E-70 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PANTHER PTHR11652 1 116 4.6E-75 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-60 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.002 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 PAM18_RS03400 d35b6f1d8024dfdd575ece7c4321a1d8 123 PIRSF PIRSF002133 1 123 8.0E-53 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PAM18_RS00975 2a798af238a75b61edd97400ebc56a87 300 PANTHER PTHR30468 14 298 6.1E-171 T 26-04-2016 PAM18_RS00975 2a798af238a75b61edd97400ebc56a87 300 Gene3D G3DSA:3.60.130.10 13 296 1.5E-90 T 26-04-2016 PAM18_RS00975 2a798af238a75b61edd97400ebc56a87 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 280 2.8E-53 T 26-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 PAM18_RS00975 2a798af238a75b61edd97400ebc56a87 300 PANTHER PTHR30468:SF5 14 298 6.1E-171 T 26-04-2016 PAM18_RS00975 2a798af238a75b61edd97400ebc56a87 300 SUPERFAMILY SSF51197 13 296 3.75E-89 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 Gene3D G3DSA:3.30.300.30 429 533 3.3E-4 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 Gene3D G3DSA:3.40.50.980 177 355 3.7E-29 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 Gene3D G3DSA:2.30.38.10 361 422 1.6E-15 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 SUPERFAMILY SSF56801 8 540 8.37E-113 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 PANTHER PTHR24096:SF249 8 550 2.4E-280 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 Gene3D G3DSA:3.40.50.980 10 176 1.6E-32 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 PANTHER PTHR24096 8 550 2.4E-280 T 26-04-2016 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 Pfam PF00501 AMP-binding enzyme 12 428 5.3E-91 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 PAM18_RS17580 089b3666d4f3801f68522c1514910744 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 26-04-2016 IPR020845 AMP-binding, conserved site PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 PANTHER PTHR11785:SF77 3 476 8.9E-251 T 26-04-2016 PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 7 481 1.0E-217 T 26-04-2016 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 PANTHER PTHR11785 3 476 8.9E-251 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 482 2.5E-206 T 26-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 PIRSF PIRSF006060 1 480 2.2E-51 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS27035 1d96b26cc07a0cd96cb1ed318839745a 482 Pfam PF13520 Amino acid permease 13 455 1.1E-76 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS11965 a3270687efb81d0b45651a0b900fee97 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 96 3.3E-22 T 26-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PAM18_RS11965 a3270687efb81d0b45651a0b900fee97 102 PANTHER PTHR11434:SF4 5 102 5.3E-63 T 26-04-2016 PAM18_RS11965 a3270687efb81d0b45651a0b900fee97 102 PANTHER PTHR11434 5 102 5.3E-63 T 26-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PAM18_RS11965 a3270687efb81d0b45651a0b900fee97 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.323 T 26-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PAM18_RS12835 fdb6f83beaf7c4825affc16826327d60 347 PANTHER PTHR30238 14 333 1.3E-167 T 26-04-2016 PAM18_RS12835 fdb6f83beaf7c4825affc16826327d60 347 PANTHER PTHR30238:SF0 14 333 1.3E-167 T 26-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PAM18_RS12835 fdb6f83beaf7c4825affc16826327d60 347 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 321 6.4E-125 T 26-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PAM18_RS12835 fdb6f83beaf7c4825affc16826327d60 347 Pfam PF03741 Integral membrane protein TerC family 82 290 2.2E-60 T 26-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 PAM18_RS19225 0e5ad388c71ed98aafdef3f774d8044e 679 PANTHER PTHR30509 13 255 4.5E-175 T 26-04-2016 PAM18_RS19225 0e5ad388c71ed98aafdef3f774d8044e 679 PANTHER PTHR30509 302 639 4.5E-175 T 26-04-2016 PAM18_RS19225 0e5ad388c71ed98aafdef3f774d8044e 679 Pfam PF04632 Fusaric acid resistance protein family 23 660 1.1E-186 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS19225 0e5ad388c71ed98aafdef3f774d8044e 679 PANTHER PTHR30509:SF1 13 255 4.5E-175 T 26-04-2016 PAM18_RS19225 0e5ad388c71ed98aafdef3f774d8044e 679 PANTHER PTHR30509:SF1 302 639 4.5E-175 T 26-04-2016 PAM18_RS17540 24b5173364da565591ede39a8b0b7b8b 355 Pfam PF01594 Domain of unknown function DUF20 11 338 7.1E-40 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS17540 24b5173364da565591ede39a8b0b7b8b 355 PANTHER PTHR21716 1 355 3.4E-152 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS17540 24b5173364da565591ede39a8b0b7b8b 355 PANTHER PTHR21716:SF20 1 355 3.4E-152 T 26-04-2016 PAM18_RS13545 c295f2f5e9973a73393998c01eaca77a 301 PANTHER PTHR30477:SF0 18 299 1.3E-88 T 26-04-2016 PAM18_RS13545 c295f2f5e9973a73393998c01eaca77a 301 PANTHER PTHR30477 18 299 1.3E-88 T 26-04-2016 PAM18_RS13545 c295f2f5e9973a73393998c01eaca77a 301 SUPERFAMILY SSF81345 19 283 3.79E-32 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS13545 c295f2f5e9973a73393998c01eaca77a 301 Gene3D G3DSA:1.10.3470.10 65 285 9.9E-12 T 26-04-2016 IPR029022 ABC transporter, BtuC-like PAM18_RS13545 c295f2f5e9973a73393998c01eaca77a 301 Pfam PF00950 ABC 3 transport family 27 286 3.5E-52 T 26-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PAM18_RS05245 3165a4dc9c2324a0f968f957e2ee2d8e 151 Pfam PF15648 Restriction endonuclease fold toxin 5 6 93 3.2E-21 T 26-04-2016 IPR028904 Tox-REase-5 domain PAM18_RS02325 cb787a167dc840e02f0dee4f891d3a84 192 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 13 178 4.5E-43 T 26-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE PAM18_RS12620 25def1dcac566663030ef29f1e9211d9 642 Pfam PF05876 Phage terminase large subunit (GpA) 39 605 6.5E-140 T 26-04-2016 IPR008866 Bacteriophage lambda, GpA PAM18_RS12620 25def1dcac566663030ef29f1e9211d9 642 PANTHER PTHR34413 27 608 1.7E-106 T 26-04-2016 PAM18_RS12620 25def1dcac566663030ef29f1e9211d9 642 PANTHER PTHR34413:SF2 27 608 1.7E-106 T 26-04-2016 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 Hamap MF_00323 Ferrochelatase [hemH]. 2 337 35.69 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 TIGRFAM TIGR00109 hemH: ferrochelatase 3 197 9.1E-39 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 Gene3D G3DSA:3.40.50.1400 3 204 4.4E-49 T 26-04-2016 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 Pfam PF00762 Ferrochelatase 4 332 1.1E-98 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 Gene3D G3DSA:3.40.50.1400 221 332 1.7E-29 T 26-04-2016 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 SUPERFAMILY SSF53800 3 335 3.53E-87 T 26-04-2016 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 PANTHER PTHR11108 224 332 1.5E-100 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PAM18_RS24280 bad9c1d3452d43362def4aacd157dae9 340 PANTHER PTHR11108 5 203 1.5E-100 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 PAM18_RS09145 939d43e7c5c685bbfaf9dd7996a4d47d 281 Gene3D G3DSA:1.10.3720.10 12 266 2.5E-52 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09145 939d43e7c5c685bbfaf9dd7996a4d47d 281 SUPERFAMILY SSF161098 13 281 1.78E-61 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS09145 939d43e7c5c685bbfaf9dd7996a4d47d 281 PANTHER PTHR32243 4 281 1.7E-149 T 26-04-2016 PAM18_RS09145 939d43e7c5c685bbfaf9dd7996a4d47d 281 PANTHER PTHR32243:SF23 4 281 1.7E-149 T 26-04-2016 PAM18_RS09145 939d43e7c5c685bbfaf9dd7996a4d47d 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 274 1.6E-13 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS07835 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Gene3D G3DSA:2.40.50.100 6 69 1.2E-21 T 26-04-2016 PAM18_RS07835 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 SUPERFAMILY SSF50331 6 69 3.16E-16 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal PAM18_RS07835 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 2.1E-18 T 26-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 PAM18_RS07835 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Pfam PF03459 TOBE domain 8 67 3.7E-16 T 26-04-2016 IPR005116 Transport-associated OB, type 1 PAM18_RS06150 8f0ac94ed20d50befe2c1515afc2228c 206 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 66 202 1.0E-49 T 26-04-2016 IPR019231 Protein of unknown function DUF2170 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Gene3D G3DSA:1.10.1040.10 189 284 4.2E-30 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Gene3D G3DSA:1.10.1040.10 414 498 1.9E-21 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 SUPERFAMILY SSF48179 413 497 1.45E-20 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 SUPERFAMILY SSF48179 186 290 1.45E-31 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 PANTHER PTHR23309 391 501 7.8E-269 T 26-04-2016 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 PANTHER PTHR23309 1 305 7.8E-269 T 26-04-2016 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 1.3E-57 T 26-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Gene3D G3DSA:3.50.50.60 306 338 5.4E-4 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 PANTHER PTHR23309:SF12 391 501 7.8E-269 T 26-04-2016 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 PANTHER PTHR23309:SF12 1 305 7.8E-269 T 26-04-2016 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 1.2E-31 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 414 497 7.0E-22 T 26-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 SUPERFAMILY SSF51735 2 186 1.75E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS17525 07efeb3cdda4cfa008358294546476b3 509 Gene3D G3DSA:3.40.50.720 3 188 1.7E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS09000 ced4b293c979f4678ece13eb5b4c459f 105 PANTHER PTHR34205 1 103 6.9E-55 T 26-04-2016 PAM18_RS09000 ced4b293c979f4678ece13eb5b4c459f 105 PANTHER PTHR34205:SF2 1 103 6.9E-55 T 26-04-2016 PAM18_RS09000 ced4b293c979f4678ece13eb5b4c459f 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 6.3E-38 T 26-04-2016 IPR009305 Protein of unknown function DUF962 PAM18_RS08120 8e4b4cc2050ea690875072cf52234b4c 121 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 1.5E-40 T 26-04-2016 IPR021218 Protein of unknown function DUF2784 PAM18_RS17405 d614349d393754799024dcab30124907 398 TIGRFAM TIGR00843 benE: benzoate transporter 18 393 6.8E-129 T 26-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PAM18_RS17405 d614349d393754799024dcab30124907 398 PANTHER PTHR30199:SF0 1 397 2.7E-184 T 26-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PAM18_RS17405 d614349d393754799024dcab30124907 398 Pfam PF03594 Benzoate membrane transport protein 16 392 4.7E-168 T 26-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 PAM18_RS17405 d614349d393754799024dcab30124907 398 PANTHER PTHR30199 1 397 2.7E-184 T 26-04-2016 PAM18_RS24295 b877a8c0aa1c4b33389e0493f4faaf70 318 Pfam PF04463 Protein of unknown function (DUF523) 13 150 1.0E-33 T 26-04-2016 IPR007553 Domain of unknown function DUF523 PAM18_RS24295 b877a8c0aa1c4b33389e0493f4faaf70 318 Pfam PF08349 Protein of unknown function (DUF1722) 193 309 5.3E-41 T 26-04-2016 IPR013560 Domain of unknown function DUF1722 PAM18_RS24295 b877a8c0aa1c4b33389e0493f4faaf70 318 PIRSF PIRSF037004 3 318 9.1E-125 T 26-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 PAM18_RS24295 b877a8c0aa1c4b33389e0493f4faaf70 318 PANTHER PTHR30087 1 318 1.8E-153 T 26-04-2016 PAM18_RS24295 b877a8c0aa1c4b33389e0493f4faaf70 318 PANTHER PTHR30087:SF0 1 318 1.8E-153 T 26-04-2016 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 PANTHER PTHR36150:SF1 2 65 5.6E-25 T 26-04-2016 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 Pfam PF03884 Domain of unknown function (DUF329) 7 55 1.5E-26 T 26-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 SUPERFAMILY SSF57716 2 55 1.3E-21 T 26-04-2016 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 PANTHER PTHR36150 2 65 5.6E-25 T 26-04-2016 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 Gene3D G3DSA:3.30.50.10 2 55 3.4E-26 T 26-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 PAM18_RS23610 bbfe392a953862f8cfd8ccbff091eb12 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 57 19.522 T 26-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 PAM18_RS00835 be95ae230cc5f23952efe472f3255553 278 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 64 278 3.1E-17 T 26-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PAM18_RS00835 be95ae230cc5f23952efe472f3255553 278 SUPERFAMILY SSF111364 39 278 5.49E-76 T 26-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PAM18_RS00835 be95ae230cc5f23952efe472f3255553 278 Gene3D G3DSA:2.40.230.20 34 278 3.1E-87 T 26-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 PAM18_RS04630 6e48ba51eba2f7789cb917762467dd49 276 SUPERFAMILY SSF55486 39 251 9.52E-38 T 26-04-2016 PAM18_RS04630 6e48ba51eba2f7789cb917762467dd49 276 Gene3D G3DSA:3.40.390.10 35 250 5.5E-31 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 PAM18_RS04630 6e48ba51eba2f7789cb917762467dd49 276 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 249 2.7E-87 T 26-04-2016 IPR010384 MtfA family PAM18_RS04630 6e48ba51eba2f7789cb917762467dd49 276 PANTHER PTHR30164 1 276 2.5E-116 T 26-04-2016 PAM18_RS20825 5112ad834f3e61a4f64e1a26d3424788 441 Pfam PF03573 outer membrane porin, OprD family 34 440 2.2E-163 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS20825 5112ad834f3e61a4f64e1a26d3424788 441 PANTHER PTHR34596 1 441 3.9E-182 T 26-04-2016 PAM18_RS20825 5112ad834f3e61a4f64e1a26d3424788 441 Gene3D G3DSA:2.40.160.10 39 441 6.5E-155 T 26-04-2016 IPR023614 Porin domain PAM18_RS28820 b334c837010e742cbe71d725b0b47e38 194 Pfam PF09335 SNARE associated Golgi protein 51 155 3.8E-8 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 Gene3D G3DSA:1.10.3720.10 16 225 8.4E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 PANTHER PTHR30085:SF1 11 232 1.1E-90 T 26-04-2016 PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 225 6.8E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 121 2.4E-16 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 PANTHER PTHR30085 11 232 1.1E-90 T 26-04-2016 PAM18_RS03800 9dc0ff535b7a200d885fac2647d2c673 232 SUPERFAMILY SSF161098 16 212 3.01E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS14600 94d9a40a7495b27ff4a2cb079a1aa41d 88 PANTHER PTHR10357 1 58 7.1E-17 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 PAM18_RS14600 94d9a40a7495b27ff4a2cb079a1aa41d 88 SUPERFAMILY SSF51445 5 57 5.05E-16 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily PAM18_RS14600 94d9a40a7495b27ff4a2cb079a1aa41d 88 Gene3D G3DSA:3.20.20.80 5 58 7.9E-17 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 PAM18_RS14600 94d9a40a7495b27ff4a2cb079a1aa41d 88 PANTHER PTHR10357:SF142 1 58 7.1E-17 T 26-04-2016 PAM18_RS23045 d23a2dd63695431d8c931cd4ceeae15d 97 PANTHER PTHR37479:SF1 1 97 4.6E-38 T 26-04-2016 PAM18_RS23045 d23a2dd63695431d8c931cd4ceeae15d 97 PANTHER PTHR37479 1 97 4.6E-38 T 26-04-2016 PAM18_RS23045 d23a2dd63695431d8c931cd4ceeae15d 97 Hamap MF_00910 Cell division protein FtsL [ftsL]. 12 95 15.183 T 26-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PAM18_RS23045 d23a2dd63695431d8c931cd4ceeae15d 97 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 13 95 9.3E-24 T 26-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PAM18_RS23045 d23a2dd63695431d8c931cd4ceeae15d 97 Pfam PF04999 Cell division protein FtsL 1 96 4.7E-33 T 26-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Gene3D G3DSA:3.30.1490.100 221 332 5.7E-34 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Gene3D G3DSA:3.30.70.270 49 147 1.1E-34 T 26-04-2016 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 PANTHER PTHR11076 1 323 4.8E-185 T 26-04-2016 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 SUPERFAMILY SSF100879 225 331 1.82E-23 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Pfam PF00817 impB/mucB/samB family 2 137 4.5E-46 T 26-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Pfam PF11798 IMS family HHH motif 152 180 7.9E-6 T 26-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Gene3D G3DSA:1.10.150.20 148 218 1.1E-28 T 26-04-2016 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 SUPERFAMILY SSF56672 1 217 4.8E-81 T 26-04-2016 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 Hamap MF_01113 DNA polymerase IV [dinB]. 1 331 32.52 T 26-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PAM18_RS21010 fcc84d0ee6a777eb743aa7e6c1f18960 332 PANTHER PTHR11076:SF32 1 323 4.8E-185 T 26-04-2016 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 2.3E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 2.3E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 2.3E-8 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 Gene3D G3DSA:3.30.450.80 40 162 0.001 T 26-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 SMART SM00421 163 220 4.7E-16 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 SUPERFAMILY SSF46894 149 219 2.24E-17 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 218 4.0E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PAM18_RS04410 cbd073902cc6387e98e9481435c77f2f 222 Gene3D G3DSA:1.10.10.10 163 219 2.2E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 Pfam PF00436 Single-strand binding protein family 5 110 3.9E-43 T 26-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 SUPERFAMILY SSF50249 3 165 2.78E-61 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 Gene3D G3DSA:2.40.50.140 1 165 1.9E-60 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 PANTHER PTHR10302:SF0 1 165 3.1E-50 T 26-04-2016 PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 165 4.9E-62 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 Hamap MF_00984 Single-stranded DNA-binding protein. 5 116 39.463 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 PIRSF PIRSF002070 1 159 7.2E-41 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PAM18_RS03580 3bc26d49d732dc3f67de58190a78e8a4 165 PANTHER PTHR10302 1 165 3.1E-50 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 Gene3D G3DSA:3.40.50.300 529 613 9.9E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 Gene3D G3DSA:3.40.50.300 393 485 9.9E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 SUPERFAMILY SSF52540 759 780 5.33E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 SUPERFAMILY SSF52540 416 464 5.33E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 SUPERFAMILY SSF52540 813 858 5.33E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 SUPERFAMILY SSF52540 517 613 5.33E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS13470 e1cc49273d08c55882c2755eb7ceda17 1076 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1072 0.0 T 26-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PANTHER PTHR24422 6 277 2.1E-148 T 26-04-2016 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 Gene3D G3DSA:3.40.50.150 84 277 5.7E-67 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 SUPERFAMILY SSF47757 12 84 1.57E-18 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 114 134 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 148 164 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PRINTS PR00996 Glutamate methyltransferase family signature 78 90 3.3E-43 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 Gene3D G3DSA:1.10.155.10 12 83 1.5E-23 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 85 276 6.4E-56 T 26-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PANTHER PTHR24422:SF13 6 277 2.1E-148 T 26-04-2016 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 72 1.3E-15 T 26-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 SMART SM00138 19 280 8.6E-93 T 26-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 SUPERFAMILY SSF53335 85 277 4.57E-56 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS00885 63e58411f4a057e13581fa619d717c7e 280 PIRSF PIRSF000410 3 280 4.7E-95 T 26-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 Gene3D G3DSA:1.10.760.10 341 441 4.8E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 Gene3D G3DSA:1.10.760.10 566 600 4.8E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 Gene3D G3DSA:1.10.760.10 490 526 4.8E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 SUPERFAMILY SSF46626 480 524 1.3E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 SUPERFAMILY SSF46626 351 409 1.3E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15905 e27f1f413c46ccbfad5fccde15be82db 631 SUPERFAMILY SSF46626 576 599 1.3E-17 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS23970 f7d875a85e4293d98376a179aa21e6a5 172 SUPERFAMILY SSF48498 63 141 1.75E-8 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAM18_RS23970 f7d875a85e4293d98376a179aa21e6a5 172 Gene3D G3DSA:1.10.357.10 7 167 1.4E-15 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 PAM18_RS23970 f7d875a85e4293d98376a179aa21e6a5 172 PANTHER PTHR30055 6 145 3.7E-13 T 26-04-2016 PAM18_RS23970 f7d875a85e4293d98376a179aa21e6a5 172 SUPERFAMILY SSF46689 6 62 1.33E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS10770 90dd0fc7d26b64faa6ba92676d14f218 340 Pfam PF03280 Proteobacterial lipase chaperone protein 135 325 7.6E-54 T 26-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 PAM18_RS10770 90dd0fc7d26b64faa6ba92676d14f218 340 Hamap MF_00790 Lipase chaperone [lifO]. 1 333 24.207 T 26-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 PAM18_RS10770 90dd0fc7d26b64faa6ba92676d14f218 340 SUPERFAMILY SSF158855 63 335 1.06E-78 T 26-04-2016 PAM18_RS15765 f80943d65812b06c1ba608c9a359defa 130 Pfam PF11720 Peptidase inhibitor I78 family 66 130 1.1E-16 T 26-04-2016 IPR021719 Proteinase inhibitor I78 PAM18_RS15765 f80943d65812b06c1ba608c9a359defa 130 PANTHER PTHR39600 1 130 5.8E-44 T 26-04-2016 PAM18_RS13575 914ab66c7e062a446e70c2357add7778 403 PANTHER PTHR34219:SF3 3 394 7.9E-120 T 26-04-2016 PAM18_RS13575 914ab66c7e062a446e70c2357add7778 403 PANTHER PTHR34219 3 394 7.9E-120 T 26-04-2016 PAM18_RS13575 914ab66c7e062a446e70c2357add7778 403 Pfam PF03929 PepSY-associated TM region 12 366 5.2E-54 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 SUPERFAMILY SSF161098 8 252 5.45E-46 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 PANTHER PTHR30183:SF2 403 539 5.3E-292 T 26-04-2016 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 Gene3D G3DSA:1.10.3720.10 10 260 3.8E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 Gene3D G3DSA:1.10.3720.10 290 531 2.1E-29 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 PANTHER PTHR30183 403 539 5.3E-292 T 26-04-2016 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 SUPERFAMILY SSF161098 280 531 1.96E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 PANTHER PTHR30183 3 386 5.3E-292 T 26-04-2016 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 PANTHER PTHR30183:SF2 3 386 5.3E-292 T 26-04-2016 PAM18_RS27270 c0463eb567c9dde88e6d81041e7f44a1 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 7.5E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS05845 e6b640444cb9361338511a22fbf6119d 129 Pfam PF11162 Protein of unknown function (DUF2946) 9 127 9.5E-11 T 26-04-2016 IPR021333 Protein of unknown function DUF2946 PAM18_RS00450 d4f1aa74b152b51b328b2b2e1be3ed85 619 PANTHER PTHR35370 2 619 0.0 T 26-04-2016 PAM18_RS00450 d4f1aa74b152b51b328b2b2e1be3ed85 619 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 618 7.4E-211 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS00450 d4f1aa74b152b51b328b2b2e1be3ed85 619 PANTHER PTHR35370:SF1 2 619 0.0 T 26-04-2016 PAM18_RS00450 d4f1aa74b152b51b328b2b2e1be3ed85 619 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 617 1.5E-229 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS00450 d4f1aa74b152b51b328b2b2e1be3ed85 619 PIRSF PIRSF028304 1 619 1.1E-191 T 26-04-2016 IPR010272 Type VI secretion system, TssF-like PAM18_RS00240 71d795bef02320b54d8f0b3a2498e74f 117 PIRSF PIRSF020555 1 117 1.8E-59 T 26-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats PAM18_RS00240 71d795bef02320b54d8f0b3a2498e74f 117 Pfam PF16068 Domain of unknown function (DUF4810) 26 108 2.6E-32 T 26-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats PAM18_RS11680 5ab4999dd98540650dbd97716b971121 435 Pfam PF03573 outer membrane porin, OprD family 36 432 1.6E-137 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS11680 5ab4999dd98540650dbd97716b971121 435 PANTHER PTHR34596 1 434 8.1E-164 T 26-04-2016 PAM18_RS11680 5ab4999dd98540650dbd97716b971121 435 Gene3D G3DSA:2.40.160.10 37 432 2.0E-122 T 26-04-2016 IPR023614 Porin domain PAM18_RS10830 0bcf990c53f9e15b87848697cfe5c325 376 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 4 372 4.7E-152 T 26-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PAM18_RS10830 0bcf990c53f9e15b87848697cfe5c325 376 PIRSF PIRSF015557 1 376 9.3E-171 T 26-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PAM18_RS10830 0bcf990c53f9e15b87848697cfe5c325 376 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 4 372 2.0E-161 T 26-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 PAM18_RS19645 5e2f7a3acae4fa59353d4d3d78fa2193 165 PANTHER PTHR38773 1 165 1.8E-91 T 26-04-2016 PAM18_RS19645 5e2f7a3acae4fa59353d4d3d78fa2193 165 SMART SM00731 7 159 9.7E-62 T 26-04-2016 IPR006640 SprT-like PAM18_RS19645 5e2f7a3acae4fa59353d4d3d78fa2193 165 Pfam PF10263 SprT-like family 10 158 8.6E-30 T 26-04-2016 IPR006640 SprT-like PAM18_RS19645 5e2f7a3acae4fa59353d4d3d78fa2193 165 Hamap MF_00746 Protein SprT [sprT]. 3 159 36.608 T 26-04-2016 IPR023483 Uncharacterised protein family SprT PAM18_RS24540 fd33fb31409fbd121a8ad9bb0881d5f6 218 Pfam PF04403 Paraquat-inducible protein A 57 208 4.2E-48 T 26-04-2016 IPR007498 Paraquat-inducible protein A PAM18_RS24540 fd33fb31409fbd121a8ad9bb0881d5f6 218 PANTHER PTHR30462:SF3 15 209 2.0E-28 T 26-04-2016 PAM18_RS24540 fd33fb31409fbd121a8ad9bb0881d5f6 218 PANTHER PTHR30462 15 209 2.0E-28 T 26-04-2016 PAM18_RS04535 ab281e63b3e051bb1fdf8354cc93afb5 248 SUPERFAMILY SSF53850 26 234 5.61E-28 T 26-04-2016 PAM18_RS04535 ab281e63b3e051bb1fdf8354cc93afb5 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 233 1.1E-10 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS04535 ab281e63b3e051bb1fdf8354cc93afb5 248 PANTHER PTHR35936 3 244 4.2E-153 T 26-04-2016 PAM18_RS04535 ab281e63b3e051bb1fdf8354cc93afb5 248 PANTHER PTHR35936:SF2 3 244 4.2E-153 T 26-04-2016 PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 SMART SM00318 24 155 4.8E-15 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 Gene3D G3DSA:2.40.50.90 27 155 2.4E-23 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 PANTHER PTHR12302 22 156 2.1E-36 T 26-04-2016 PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 PANTHER PTHR12302:SF0 22 156 2.1E-36 T 26-04-2016 PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 Pfam PF00565 Staphylococcal nuclease homologue 47 154 1.5E-16 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS26405 59505b7f896a1dbf6ccdb7a878990cf0 255 SUPERFAMILY SSF50199 22 156 1.57E-28 T 26-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Gene3D G3DSA:1.10.1040.10 39 325 5.6E-114 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.8E-63 T 26-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.862 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Gene3D G3DSA:3.50.50.60 3 38 1.8E-5 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.3E-130 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF48179 183 332 1.55E-69 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 PANTHER PTHR21371 1 337 1.2E-192 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.3E-75 T 26-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 PAM18_RS24585 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF51735 1 182 6.95E-75 T 26-04-2016 IPR016040 NAD(P)-binding domain PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 Pfam PF00534 Glycosyl transferases group 1 184 348 1.8E-32 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 PANTHER PTHR12526:SF220 79 352 3.1E-118 T 26-04-2016 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 PANTHER PTHR12526:SF220 1 55 3.1E-118 T 26-04-2016 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 PANTHER PTHR12526 79 352 3.1E-118 T 26-04-2016 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 PANTHER PTHR12526 1 55 3.1E-118 T 26-04-2016 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 Gene3D G3DSA:3.40.50.2000 153 348 9.8E-20 T 26-04-2016 PAM18_RS26215 be2ab8908123860511a147e51e569c2f 373 SUPERFAMILY SSF53756 4 363 2.3E-60 T 26-04-2016 PAM18_RS14405 9cc84d93739a9790cc5bd9d48a9b7e0a 395 Pfam PF00534 Glycosyl transferases group 1 192 365 1.4E-14 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 PAM18_RS14405 9cc84d93739a9790cc5bd9d48a9b7e0a 395 PANTHER PTHR12526 1 390 6.8E-48 T 26-04-2016 PAM18_RS14405 9cc84d93739a9790cc5bd9d48a9b7e0a 395 SUPERFAMILY SSF53756 8 389 1.26E-34 T 26-04-2016 PAM18_RS14405 9cc84d93739a9790cc5bd9d48a9b7e0a 395 PANTHER PTHR12526:SF397 1 390 6.8E-48 T 26-04-2016 PAM18_RS18740 32b94fb038cb99165a178560346dfb9f 240 Gene3D G3DSA:3.60.140.10 18 239 1.0E-53 T 26-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAM18_RS18740 32b94fb038cb99165a178560346dfb9f 240 PANTHER PTHR30616 4 147 1.5E-60 T 26-04-2016 PAM18_RS18740 32b94fb038cb99165a178560346dfb9f 240 PANTHER PTHR30616 165 240 1.5E-60 T 26-04-2016 PAM18_RS18740 32b94fb038cb99165a178560346dfb9f 240 SUPERFAMILY SSF64438 26 224 3.11E-47 T 26-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic PAM18_RS18740 32b94fb038cb99165a178560346dfb9f 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 18 226 1.2E-45 T 26-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAM18_RS15740 2f03dc354fe7adc8d116d8e985c37f97 399 SUPERFAMILY SSF56935 34 398 3.66E-28 T 26-04-2016 PAM18_RS15740 2f03dc354fe7adc8d116d8e985c37f97 399 Pfam PF13609 Gram-negative porin 27 378 2.3E-24 T 26-04-2016 PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 SUPERFAMILY SSF54909 246 344 1.27E-28 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 Pfam PF03992 Antibiotic biosynthesis monooxygenase 261 321 6.0E-7 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 PANTHER PTHR11550 30 214 7.8E-48 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 Gene3D G3DSA:3.30.70.900 262 343 1.5E-12 T 26-04-2016 PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 Pfam PF00117 Glutamine amidotransferase class-I 31 215 5.6E-10 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 SUPERFAMILY SSF52317 9 238 3.21E-43 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS14245 f942814d96cf3d2212a11e72602d9bcf 356 Gene3D G3DSA:3.40.50.880 9 239 2.8E-37 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 SUPERFAMILY SSF75471 1 96 9.55E-28 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.2E-18 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 2.4E-23 T 26-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 PANTHER PTHR40065 1 104 1.5E-31 T 26-04-2016 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 93 2.0E-41 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 Gene3D G3DSA:3.30.110.60 1 95 5.9E-28 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 SMART SM01103 3 86 1.6E-38 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 PAM18_RS24895 e6b8616b2d5c6e134a441db2369a2381 104 PANTHER PTHR40065:SF1 1 104 1.5E-31 T 26-04-2016 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 SUPERFAMILY SSF46689 202 250 3.54E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 PANTHER PTHR11019 6 256 3.7E-126 T 26-04-2016 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 PANTHER PTHR11019:SF99 6 256 3.7E-126 T 26-04-2016 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 Gene3D G3DSA:1.10.10.60 203 247 1.3E-8 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 Gene3D G3DSA:1.10.10.60 145 202 2.5E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 SUPERFAMILY SSF51182 7 173 1.27E-19 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 Gene3D G3DSA:2.60.120.10 11 82 6.3E-10 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 244 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 SMART SM00342 166 248 9.1E-24 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS05145 3cd2a12cc775d91ae8d33752078a4bab 262 Pfam PF12833 Helix-turn-helix domain 175 250 4.2E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS06155 c6289fca9183e2edfde0581821931113 231 Pfam PF04012 PspA/IM30 family 2 228 1.1E-65 T 26-04-2016 IPR007157 PspA/IM30 PAM18_RS06155 c6289fca9183e2edfde0581821931113 231 PANTHER PTHR31088:SF0 2 228 2.9E-63 T 26-04-2016 PAM18_RS06155 c6289fca9183e2edfde0581821931113 231 PANTHER PTHR31088 2 228 2.9E-63 T 26-04-2016 PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 Gene3D G3DSA:3.60.21.10 199 251 2.6E-33 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 Gene3D G3DSA:3.60.21.10 16 150 2.6E-33 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 SUPERFAMILY SSF56300 192 253 5.7E-33 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 SUPERFAMILY SSF56300 15 136 5.7E-33 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 PANTHER PTHR34990 2 270 7.3E-157 T 26-04-2016 PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 PANTHER PTHR34990:SF2 2 270 7.3E-157 T 26-04-2016 PAM18_RS08985 3e29310b879bf372de7bbfe5f80d6ea4 270 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 17 231 1.3E-13 T 26-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type PAM18_RS00245 cabf0e00fab0d23b4fa0025efdc2f729 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 15 214 7.4E-95 T 26-04-2016 IPR008517 Protein of unknown function DUF799 PAM18_RS14880 ef2222cf91238ed7b0b57ef0b2a36f31 172 Pfam PF02464 Competence-damaged protein 10 159 5.4E-36 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS14880 ef2222cf91238ed7b0b57ef0b2a36f31 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 2.1E-24 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS14880 ef2222cf91238ed7b0b57ef0b2a36f31 172 Gene3D G3DSA:3.90.950.20 6 163 3.5E-40 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS14880 ef2222cf91238ed7b0b57ef0b2a36f31 172 SUPERFAMILY SSF142433 5 163 9.94E-40 T 26-04-2016 IPR008136 CinA, C-terminal PAM18_RS14880 ef2222cf91238ed7b0b57ef0b2a36f31 172 PANTHER PTHR13939 1 171 2.3E-59 T 26-04-2016 PAM18_RS05485 6f54245e0b0ba3796bb7c6e2b7a4cc4e 238 PIRSF PIRSF000851 2 238 1.4E-89 T 26-04-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 PAM18_RS05485 6f54245e0b0ba3796bb7c6e2b7a4cc4e 238 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 69 1.6E-6 T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS17230 f3b458e869e09fb4710594a7e17b7de8 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 9.3E-12 T 26-04-2016 IPR027379 Cardiolipin synthase N-terminal PAM18_RS13780 24b0f8c25b197e26d8f4f881ae7cedeb 252 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 21 233 6.2E-36 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS13780 24b0f8c25b197e26d8f4f881ae7cedeb 252 Pfam PF09850 Type VI secretion system protein DotU 72 227 6.2E-30 T 26-04-2016 IPR017732 Type IV / VI secretion system, DotU PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 PANTHER PTHR30483 1 420 2.6E-235 T 26-04-2016 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 Gene3D G3DSA:3.40.50.2300 146 345 4.4E-73 T 26-04-2016 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.2E-5 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.2E-5 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 5.2E-5 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 1.1E-179 T 26-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 PANTHER PTHR30483:SF8 1 420 2.6E-235 T 26-04-2016 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 Pfam PF13433 Periplasmic binding protein domain 31 407 1.4E-174 T 26-04-2016 PAM18_RS25435 bf33a49cd5e2c18553f2d28a9410eb82 421 SUPERFAMILY SSF53822 30 408 6.8E-94 T 26-04-2016 IPR028082 Periplasmic binding protein-like I PAM18_RS05025 c66535535e1005efa870161cf3f674c3 167 Pfam PF01936 NYN domain 11 159 4.8E-35 T 26-04-2016 IPR021139 NYN domain, limkain-b1-type PAM18_RS05025 c66535535e1005efa870161cf3f674c3 167 PANTHER PTHR35458:SF2 1 164 1.8E-64 T 26-04-2016 PAM18_RS05025 c66535535e1005efa870161cf3f674c3 167 Gene3D G3DSA:3.40.50.1010 8 160 2.8E-42 T 26-04-2016 IPR029060 PIN domain-like PAM18_RS05025 c66535535e1005efa870161cf3f674c3 167 PANTHER PTHR35458 1 164 1.8E-64 T 26-04-2016 PAM18_RS28585 135cf11bfd2e8d209901c41d2733acab 379 PANTHER PTHR11118 21 373 1.4E-112 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS28585 135cf11bfd2e8d209901c41d2733acab 379 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 367 8.5E-189 T 26-04-2016 IPR017510 Release factor H-coupled RctB family protein PAM18_RS28585 135cf11bfd2e8d209901c41d2733acab 379 SUPERFAMILY SSF103365 8 372 6.8E-103 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS28585 135cf11bfd2e8d209901c41d2733acab 379 Pfam PF01139 tRNA-splicing ligase RtcB 125 372 2.5E-55 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS28585 135cf11bfd2e8d209901c41d2733acab 379 Pfam PF01139 tRNA-splicing ligase RtcB 29 98 1.1E-8 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS18990 f30a20ed74adc32badd07bceb7aa2a39 503 PIRSF PIRSF002744 1 483 2.0E-96 T 26-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PAM18_RS18990 f30a20ed74adc32badd07bceb7aa2a39 503 PANTHER PTHR31806 1 487 1.5E-256 T 26-04-2016 PAM18_RS18990 f30a20ed74adc32badd07bceb7aa2a39 503 PANTHER PTHR31806:SF2 1 487 1.5E-256 T 26-04-2016 PAM18_RS18990 f30a20ed74adc32badd07bceb7aa2a39 503 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 448 1.3E-46 T 26-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 PAM18_RS05380 f1701b50113d37474f5883f36258881a 249 Gene3D G3DSA:3.40.50.150 18 247 9.2E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS05380 f1701b50113d37474f5883f36258881a 249 PANTHER PTHR10108:SF730 2 230 1.6E-49 T 26-04-2016 PAM18_RS05380 f1701b50113d37474f5883f36258881a 249 Pfam PF08241 Methyltransferase domain 41 128 1.3E-16 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS05380 f1701b50113d37474f5883f36258881a 249 PANTHER PTHR10108 2 230 1.6E-49 T 26-04-2016 PAM18_RS05380 f1701b50113d37474f5883f36258881a 249 SUPERFAMILY SSF53335 3 171 5.88E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS22160 e9d02624652723f12a758968f396c650 314 SUPERFAMILY SSF54534 157 260 1.24E-24 T 26-04-2016 PAM18_RS22160 e9d02624652723f12a758968f396c650 314 Gene3D G3DSA:3.10.50.40 151 282 1.8E-31 T 26-04-2016 PAM18_RS22160 e9d02624652723f12a758968f396c650 314 Pfam PF13145 PPIC-type PPIASE domain 139 270 3.6E-22 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 PAM18_RS22160 e9d02624652723f12a758968f396c650 314 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 195 216 - T 26-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PAM18_RS22160 e9d02624652723f12a758968f396c650 314 PANTHER PTHR10657 60 80 1.3E-32 T 26-04-2016 PAM18_RS22160 e9d02624652723f12a758968f396c650 314 PANTHER PTHR10657 133 306 1.3E-32 T 26-04-2016 PAM18_RS06880 78841bf1847934705c806d022056398e 205 PANTHER PTHR34408 21 60 7.8E-36 T 26-04-2016 PAM18_RS06880 78841bf1847934705c806d022056398e 205 PANTHER PTHR34408 86 203 7.8E-36 T 26-04-2016 PAM18_RS06880 78841bf1847934705c806d022056398e 205 Gene3D G3DSA:3.30.20.10 109 146 2.1E-9 T 26-04-2016 PAM18_RS06880 78841bf1847934705c806d022056398e 205 SUPERFAMILY SSF53955 8 202 6.19E-42 T 26-04-2016 IPR023346 Lysozyme-like domain PAM18_RS06880 78841bf1847934705c806d022056398e 205 Gene3D G3DSA:1.10.530.10 36 54 2.7E-5 T 26-04-2016 PAM18_RS06880 78841bf1847934705c806d022056398e 205 Gene3D G3DSA:1.10.530.10 147 188 2.7E-5 T 26-04-2016 PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 Pfam PF03888 MucB/RseB N-terminal domain 23 194 2.6E-55 T 26-04-2016 IPR033434 MucB/RseB, N-terminal PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 PIRSF PIRSF005427 1 315 1.7E-97 T 26-04-2016 IPR005588 MucB/RseB PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 Gene3D G3DSA:2.50.20.10 115 182 1.6E-10 T 26-04-2016 PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 Pfam PF17188 MucB/RseB C-terminal domain 210 309 1.3E-23 T 26-04-2016 IPR033436 MucB/RseB, C-terminal PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 PANTHER PTHR38782 1 314 1.1E-136 T 26-04-2016 PAM18_RS21820 77beb0ece776f0d1a5e083861cec6711 316 PANTHER PTHR38782:SF1 1 314 1.1E-136 T 26-04-2016 PAM18_RS00860 84ea393946abf940601efaae5c8a43ba 126 Pfam PF09345 Domain of unknown function (DUF1987) 13 111 1.6E-34 T 26-04-2016 IPR018530 Domain of unknown function DUF1987 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 Gene3D G3DSA:3.90.1150.10 11 72 4.4E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 Gene3D G3DSA:3.90.1150.10 348 454 4.4E-39 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 PANTHER PTHR11986 1 458 1.5E-130 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 Gene3D G3DSA:3.40.640.10 74 346 1.2E-74 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 Pfam PF00202 Aminotransferase class-III 37 447 1.1E-91 T 26-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 SUPERFAMILY SSF53383 18 447 2.81E-115 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS01095 ba7eb384b4f428ae712e9bd5f28f1f31 460 PANTHER PTHR11986:SF81 1 458 1.5E-130 T 26-04-2016 PAM18_RS15635 15e6a4380bda7d9de21c4c092a31727f 118 Pfam PF04237 YjbR 11 101 1.5E-13 T 26-04-2016 IPR007351 Uncharacterised protein YjbR PAM18_RS15635 15e6a4380bda7d9de21c4c092a31727f 118 SUPERFAMILY SSF142906 1 114 1.03E-28 T 26-04-2016 PAM18_RS15635 15e6a4380bda7d9de21c4c092a31727f 118 PANTHER PTHR35145 1 117 3.1E-40 T 26-04-2016 PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 265 39.858 T 26-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 276 6.2E-112 T 26-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 PANTHER PTHR37426:SF1 1 278 1.5E-157 T 26-04-2016 PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 PANTHER PTHR37426 1 278 1.5E-157 T 26-04-2016 PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 Gene3D G3DSA:3.40.50.150 1 277 2.6E-105 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS26260 d5e3c55cb67a5c9d14932388998bec24 278 SUPERFAMILY SSF53335 8 274 1.33E-89 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10885 f4cec37ef3e09d0ab029948d559ddc7d 263 SUPERFAMILY SSF52096 9 263 1.59E-60 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10885 f4cec37ef3e09d0ab029948d559ddc7d 263 Gene3D G3DSA:3.90.226.10 9 257 4.2E-57 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS10885 f4cec37ef3e09d0ab029948d559ddc7d 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 262 1.4E-37 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 PAM18_RS10885 f4cec37ef3e09d0ab029948d559ddc7d 263 PANTHER PTHR11941:SF82 6 260 1.4E-185 T 26-04-2016 PAM18_RS10885 f4cec37ef3e09d0ab029948d559ddc7d 263 PANTHER PTHR11941 6 260 1.4E-185 T 26-04-2016 PAM18_RS13645 09460fe2c3c064290de0deeca4cca112 331 PIRSF PIRSF018266 5 327 5.4E-89 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS13645 09460fe2c3c064290de0deeca4cca112 331 Pfam PF04773 FecR protein 122 211 2.2E-19 T 26-04-2016 IPR006860 FecR protein PAM18_RS13645 09460fe2c3c064290de0deeca4cca112 331 PANTHER PTHR30273:SF2 6 328 5.3E-96 T 26-04-2016 PAM18_RS13645 09460fe2c3c064290de0deeca4cca112 331 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 8.4E-14 T 26-04-2016 IPR032623 FecR, N-terminal PAM18_RS13645 09460fe2c3c064290de0deeca4cca112 331 PANTHER PTHR30273 6 328 5.3E-96 T 26-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAM18_RS11420 fd5993183d1ca45a8d5ac6a9890dad36 237 SUPERFAMILY SSF54060 23 223 6.36E-83 T 26-04-2016 PAM18_RS11420 fd5993183d1ca45a8d5ac6a9890dad36 237 Pfam PF04231 Endonuclease I 25 221 9.6E-38 T 26-04-2016 IPR007346 Endonuclease I GO:0004518 PAM18_RS11420 fd5993183d1ca45a8d5ac6a9890dad36 237 PANTHER PTHR33607 1 237 2.0E-52 T 26-04-2016 PAM18_RS13380 9d2934353556dc2c2ff57767d705eb61 181 Pfam PF16304 Domain of unknown function (DUF4946) 32 180 2.1E-68 T 26-04-2016 IPR032543 Protein of unknown function DUF4946 PAM18_RS10880 4a6c17dc82e45b6250ec5b0326b3aaf0 249 PANTHER PTHR11558 5 171 1.6E-30 T 26-04-2016 PAM18_RS10880 4a6c17dc82e45b6250ec5b0326b3aaf0 249 SUPERFAMILY SSF53335 5 197 1.07E-40 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10880 4a6c17dc82e45b6250ec5b0326b3aaf0 249 Pfam PF01564 Spermine/spermidine synthase 58 172 1.6E-5 T 26-04-2016 PAM18_RS10880 4a6c17dc82e45b6250ec5b0326b3aaf0 249 Gene3D G3DSA:3.40.50.150 6 236 2.2E-51 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS24680 acc69feb8deb022ec8329122c4db7719 149 Pfam PF14248 Domain of unknown function (DUF4345) 4 120 1.7E-12 T 26-04-2016 IPR025597 Protein of unknown function DUF4345 PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 SUPERFAMILY SSF53383 6 398 3.63E-108 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 PANTHER PTHR11601:SF17 1 401 5.6E-156 T 26-04-2016 PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 Pfam PF00266 Aminotransferase class-V 24 389 7.4E-137 T 26-04-2016 IPR000192 Aminotransferase class V domain PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 PANTHER PTHR11601 1 401 5.6E-156 T 26-04-2016 PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 Gene3D G3DSA:3.90.1150.10 281 394 1.1E-20 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site PAM18_RS06475 4c27e4c0e128946928d38ebaea29012e 401 Gene3D G3DSA:3.40.640.10 34 280 1.0E-77 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 PAM18_RS24395 7ce37a36b9f6027949d9a3c576ae8430 420 Gene3D G3DSA:3.40.50.300 1 210 5.9E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS24395 7ce37a36b9f6027949d9a3c576ae8430 420 Pfam PF05707 Zonular occludens toxin (Zot) 2 212 5.5E-62 T 26-04-2016 IPR008900 Zona occludens toxin PAM18_RS20940 e4ed48786fea3e16b05a3de8c39e40c8 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 179 2.8E-61 T 26-04-2016 IPR018636 Protein of unknown function DUF2058 PAM18_RS25940 047f4679c3ee5444872ee47aa33e3d5d 289 PANTHER PTHR10067 12 285 9.5E-108 T 26-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PAM18_RS25940 047f4679c3ee5444872ee47aa33e3d5d 289 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 287 50.31 T 26-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PAM18_RS25940 047f4679c3ee5444872ee47aa33e3d5d 289 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 285 7.2E-80 T 26-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PAM18_RS25940 047f4679c3ee5444872ee47aa33e3d5d 289 Pfam PF02666 Phosphatidylserine decarboxylase 65 283 3.4E-60 T 26-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 PANTHER PTHR22911:SF44 1 298 1.9E-98 T 26-04-2016 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 Pfam PF00892 EamA-like transporter family 18 139 8.8E-9 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 Pfam PF00892 EamA-like transporter family 154 282 1.9E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 PANTHER PTHR22911 1 298 1.9E-98 T 26-04-2016 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 SUPERFAMILY SSF103481 189 286 2.62E-11 T 26-04-2016 PAM18_RS12420 3f71485359a6fd37d00f6b70e05eccd0 299 SUPERFAMILY SSF103481 39 141 2.09E-12 T 26-04-2016 PAM18_RS05500 f7b95fb59c60e6c9d6ff804046208860 104 PANTHER PTHR34477:SF1 8 104 3.0E-36 T 26-04-2016 PAM18_RS05500 f7b95fb59c60e6c9d6ff804046208860 104 PANTHER PTHR34477 8 104 3.0E-36 T 26-04-2016 PAM18_RS05500 f7b95fb59c60e6c9d6ff804046208860 104 SUPERFAMILY SSF82771 15 83 1.44E-9 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily PAM18_RS05500 f7b95fb59c60e6c9d6ff804046208860 104 Pfam PF01541 GIY-YIG catalytic domain 14 84 8.2E-12 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily PAM18_RS00310 6d9d28f719c1ce00ebf6272ed2bc9d53 77 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 1.0E-24 T 26-04-2016 IPR010595 Protein of unknown function DUF1161 PAM18_RS00310 6d9d28f719c1ce00ebf6272ed2bc9d53 77 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 74 3.0E-29 T 26-04-2016 IPR010595 Protein of unknown function DUF1161 PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 PANTHER PTHR30349:SF20 59 315 4.9E-29 T 26-04-2016 PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 Gene3D G3DSA:1.10.443.10 154 313 2.2E-37 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 PANTHER PTHR30349 59 315 4.9E-29 T 26-04-2016 PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 Gene3D G3DSA:1.10.150.130 59 151 5.4E-10 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 Pfam PF00589 Phage integrase family 155 309 2.3E-20 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PAM18_RS06715 b210d27c10e0dcb082a869c3e117eca6 324 SUPERFAMILY SSF56349 57 313 4.32E-55 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 SUPERFAMILY SSF53328 6 204 6.15E-67 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 137 160 - T 26-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 Pfam PF00551 Formyl transferase 6 184 2.6E-66 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 4.7E-78 T 26-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 Gene3D G3DSA:3.40.50.170 6 198 1.9E-74 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 PANTHER PTHR10520 6 197 9.1E-106 T 26-04-2016 PAM18_RS20900 1f4934775f501b79c534583bc5a2b2ad 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 191 32.7 T 26-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 290 1.2E-59 T 26-04-2016 IPR005218 Diacylglycerol/lipid kinase PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 PANTHER PTHR12358 28 300 8.1E-59 T 26-04-2016 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 296 48.327 T 26-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 125 4.6E-25 T 26-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 SMART SM00046 6 125 4.9E-14 T 26-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 295 1.4E-144 T 26-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 PAM18_RS09955 9bf894b1dea938571efff9e5ebe49a6a 302 SUPERFAMILY SSF111331 4 291 2.4E-66 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 Pfam PF03473 MOSC domain 142 265 1.0E-31 T 26-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 PANTHER PTHR14237 3 268 1.3E-94 T 26-04-2016 PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 SUPERFAMILY SSF50800 152 267 5.58E-22 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 SUPERFAMILY SSF50800 2 59 5.58E-22 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 SUPERFAMILY SSF141673 4 133 4.84E-34 T 26-04-2016 PAM18_RS09960 b7af5924d6e3922495fffe70fa49e468 268 Pfam PF03476 MOSC N-terminal beta barrel domain 1 119 1.2E-34 T 26-04-2016 IPR005303 MOSC, N-terminal beta barrel PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 PANTHER PTHR13847:SF190 8 402 3.9E-236 T 26-04-2016 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 Gene3D G3DSA:3.50.50.60 345 395 1.4E-44 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 Gene3D G3DSA:3.50.50.60 22 119 1.4E-44 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 Gene3D G3DSA:3.50.50.60 172 252 1.4E-44 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 Pfam PF01266 FAD dependent oxidoreductase 30 381 1.3E-48 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 PANTHER PTHR13847 8 402 3.9E-236 T 26-04-2016 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 SUPERFAMILY SSF51905 345 399 1.75E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS20510 f0c8272de8b98c8875239cf0bc787f1d 428 SUPERFAMILY SSF51905 29 253 1.75E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PAM18_RS19835 7e800c83e87c4791aeca521309a739f3 122 Pfam PF09961 Uncharacterized protein conserved in bacteria (DUF2195) 6 121 2.0E-36 T 26-04-2016 IPR018696 Protein of unknown function DUF2195 PAM18_RS01945 207860e2caf7f3dc590ed15c4db8b659 107 Pfam PF11872 Protein of unknown function (DUF3392) 5 106 5.1E-41 T 26-04-2016 IPR021813 Protein of unknown function DUF3392 PAM18_RS19635 0b4c8f0341e68aec693ef33c136d55c5 197 Pfam PF12339 DNA-J related protein 11 134 7.9E-43 T 26-04-2016 IPR021059 DnaJ-related protein, N-terminal PAM18_RS19635 0b4c8f0341e68aec693ef33c136d55c5 197 Gene3D G3DSA:1.10.287.110 133 194 4.4E-14 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS19635 0b4c8f0341e68aec693ef33c136d55c5 197 SUPERFAMILY SSF46565 137 192 1.44E-12 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS19635 0b4c8f0341e68aec693ef33c136d55c5 197 SMART SM00271 141 195 0.0048 T 26-04-2016 IPR001623 DnaJ domain PAM18_RS25285 16166af0a78e14cd51ff6b9951d5e9dc 151 Pfam PF09980 Predicted membrane protein (DUF2214) 3 148 3.0E-53 T 26-04-2016 IPR018706 Protein of unknown function DUF2214, membrane PAM18_RS26935 58f32a4406bba97d07e570d40f0a1c38 229 Pfam PF04367 Protein of unknown function (DUF502) 72 175 3.4E-12 T 26-04-2016 IPR007462 Protein of unknown function DUF502 PAM18_RS26935 58f32a4406bba97d07e570d40f0a1c38 229 PANTHER PTHR31876 3 228 1.8E-59 T 26-04-2016 PAM18_RS10530 4b78f5df730c93f1fd628929453c41c1 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 2 185 24.996 T 26-04-2016 IPR022929 Putative manganese efflux pump MntP PAM18_RS10530 4b78f5df730c93f1fd628929453c41c1 189 Pfam PF02659 Putative manganese efflux pump 31 182 1.0E-52 T 26-04-2016 IPR003810 Putative manganese efflux pump PAM18_RS10530 4b78f5df730c93f1fd628929453c41c1 189 PANTHER PTHR35529 2 189 3.9E-75 T 26-04-2016 PAM18_RS00950 47c84e776d6711407da160fab4e002bc 293 PANTHER PTHR36838:SF2 1 293 1.0E-160 T 26-04-2016 PAM18_RS00950 47c84e776d6711407da160fab4e002bc 293 Pfam PF03547 Membrane transport protein 149 287 3.8E-11 T 26-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PAM18_RS00950 47c84e776d6711407da160fab4e002bc 293 PANTHER PTHR36838 1 293 1.0E-160 T 26-04-2016 PAM18_RS00405 9bbb4fd9bbaab83a33d309b939f134a0 444 PANTHER PTHR35566 1 444 3.3E-212 T 26-04-2016 PAM18_RS00405 9bbb4fd9bbaab83a33d309b939f134a0 444 PANTHER PTHR35566:SF1 1 444 3.3E-212 T 26-04-2016 PAM18_RS00405 9bbb4fd9bbaab83a33d309b939f134a0 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.4E-160 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS00405 9bbb4fd9bbaab83a33d309b939f134a0 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.5E-157 T 26-04-2016 IPR010263 Type VI secretion protein, VC_A0114 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 Gene3D G3DSA:3.40.50.880 7 286 7.6E-78 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 PANTHER PTHR11019 6 115 1.6E-108 T 26-04-2016 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 PANTHER PTHR11019 133 274 1.6E-108 T 26-04-2016 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 PIRSF PIRSF037798 1 291 1.3E-166 T 26-04-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 PANTHER PTHR11019:SF109 6 115 1.6E-108 T 26-04-2016 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 PANTHER PTHR11019:SF109 133 274 1.6E-108 T 26-04-2016 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 Hamap MF_01046 Molecular chaperone Hsp31 and glyoxalase 3 [hchA]. 3 291 68.015 T 26-04-2016 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 GO:0016829|GO:0042026 KEGG: 00620+4.2.1.130|MetaCyc: PWY-901 PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 Pfam PF01965 DJ-1/PfpI family 77 196 3.5E-7 T 26-04-2016 IPR002818 DJ-1/PfpI PAM18_RS19905 8404c08c281530fea8d15a07d08fb7c9 291 SUPERFAMILY SSF52317 50 285 1.15E-52 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like PAM18_RS01245 073a8e86cc923fe9c5a68cb55c21b7b3 213 SUPERFAMILY SSF103359 46 196 5.23E-6 T 26-04-2016 PAM18_RS01245 073a8e86cc923fe9c5a68cb55c21b7b3 213 Pfam PF05076 Suppressor of fused protein (SUFU) 47 196 1.7E-22 T 26-04-2016 IPR020941 Suppressor of fused-like domain PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 Gene3D G3DSA:3.40.190.10 195 242 1.7E-4 T 26-04-2016 PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 PANTHER PTHR30579 1 287 7.1E-185 T 26-04-2016 PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.9E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 PANTHER PTHR30579:SF6 1 287 7.1E-185 T 26-04-2016 PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 SUPERFAMILY SSF53850 94 287 1.38E-21 T 26-04-2016 PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 Gene3D G3DSA:1.10.10.10 5 89 5.1E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 SUPERFAMILY SSF46785 3 84 2.43E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 Pfam PF03466 LysR substrate binding domain 94 286 8.5E-22 T 26-04-2016 IPR005119 LysR, substrate-binding PAM18_RS19260 2bdd992882528ca111bbc319c12b6d14 288 Gene3D G3DSA:3.40.190.10 91 194 3.0E-13 T 26-04-2016 PAM18_RS03035 d10ab0ef4405a6342309e3be622eec70 353 Gene3D G3DSA:3.40.50.1820 211 341 1.2E-10 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03035 d10ab0ef4405a6342309e3be622eec70 353 Gene3D G3DSA:3.40.50.1820 89 135 1.2E-10 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03035 d10ab0ef4405a6342309e3be622eec70 353 Pfam PF12048 Protein of unknown function (DUF3530) 16 341 1.4E-106 T 26-04-2016 IPR022529 Protein of unknown function DUF3530 PAM18_RS03035 d10ab0ef4405a6342309e3be622eec70 353 SUPERFAMILY SSF53474 72 127 2.82E-9 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS03035 d10ab0ef4405a6342309e3be622eec70 353 SUPERFAMILY SSF53474 207 319 2.82E-9 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS00430 1505677bb7b9248868b4ab143d1a7cfb 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 3.3E-219 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS00430 1505677bb7b9248868b4ab143d1a7cfb 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 493 1.3E-190 T 26-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PAM18_RS00430 1505677bb7b9248868b4ab143d1a7cfb 498 PANTHER PTHR35565 1 498 0.0 T 26-04-2016 PAM18_RS00430 1505677bb7b9248868b4ab143d1a7cfb 498 PANTHER PTHR35565:SF3 1 498 0.0 T 26-04-2016 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 Pfam PF01554 MatE 244 409 2.6E-30 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 Pfam PF01554 MatE 18 176 7.3E-22 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 PIRSF PIRSF006603 5 455 6.2E-54 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 PANTHER PTHR11206 8 441 6.9E-88 T 26-04-2016 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 423 4.4E-68 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS27665 2b5c449381f55e4ec363e5068dbae8a8 488 PANTHER PTHR11206:SF95 8 441 6.9E-88 T 26-04-2016 PAM18_RS20150 3c6366d997d3ca2690093d7a132d0b48 367 Pfam PF13489 Methyltransferase domain 146 309 6.7E-17 T 26-04-2016 PAM18_RS20150 3c6366d997d3ca2690093d7a132d0b48 367 Gene3D G3DSA:3.40.50.150 135 315 2.2E-26 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS20150 3c6366d997d3ca2690093d7a132d0b48 367 SUPERFAMILY SSF53335 140 324 5.63E-25 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.100 115 233 1.4E-23 T 26-04-2016 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 SUPERFAMILY SSF53850 23 299 8.96E-77 T 26-04-2016 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 310 5.3E-133 T 26-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.10 234 298 2.1E-31 T 26-04-2016 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.10 23 111 2.1E-31 T 26-04-2016 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 283 2.9E-54 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 PANTHER PTHR30177:SF6 1 287 5.7E-192 T 26-04-2016 PAM18_RS28160 186da5be8e9f7e1958278f52dec4d0aa 312 PANTHER PTHR30177 1 287 5.7E-192 T 26-04-2016 PAM18_RS12675 5e63209256cc5d55e7968f9a6a2544d6 1086 PANTHER PTHR38812 57 978 2.4E-27 T 26-04-2016 PAM18_RS12675 5e63209256cc5d55e7968f9a6a2544d6 1086 PANTHER PTHR38812:SF1 57 978 2.4E-27 T 26-04-2016 PAM18_RS12675 5e63209256cc5d55e7968f9a6a2544d6 1086 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 291 364 9.7E-19 T 26-04-2016 IPR013491 Caudovirus, tape measure, N-terminal PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Pfam PF04055 Radical SAM superfamily 112 280 8.5E-16 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 SUPERFAMILY SSF102114 108 320 1.03E-13 T 26-04-2016 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 PANTHER PTHR30544 8 362 9.5E-184 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 8 355 73.213 T 26-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 359 4.2E-144 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 PANTHER PTHR30544:SF5 8 362 9.5E-184 T 26-04-2016 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Gene3D G3DSA:3.20.20.70 108 336 3.3E-14 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS05745 92c7d0c715be41bf84b02fd7d4e8a2cb 379 PIRSF PIRSF006004 4 368 1.2E-152 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 PAM18_RS06345 98ec2774895d3d694aaf2f48b41d79f4 173 Pfam PF01661 Macro domain 20 132 4.4E-43 T 26-04-2016 IPR002589 Macro domain PAM18_RS06345 98ec2774895d3d694aaf2f48b41d79f4 173 SUPERFAMILY SSF52949 3 167 1.03E-62 T 26-04-2016 PAM18_RS06345 98ec2774895d3d694aaf2f48b41d79f4 173 Gene3D G3DSA:3.40.220.10 3 169 5.7E-69 T 26-04-2016 PAM18_RS06345 98ec2774895d3d694aaf2f48b41d79f4 173 SMART SM00506 3 132 1.5E-50 T 26-04-2016 IPR002589 Macro domain PAM18_RS06345 98ec2774895d3d694aaf2f48b41d79f4 173 PANTHER PTHR11106 4 168 8.0E-85 T 26-04-2016 PAM18_RS22870 9af90aaa8f4bbdefac4f7c87bced33b0 228 SUPERFAMILY SSF110849 29 225 1.05E-57 T 26-04-2016 IPR003115 ParB/Sulfiredoxin PAM18_RS22870 9af90aaa8f4bbdefac4f7c87bced33b0 228 Pfam PF08857 Putative ParB-like nuclease 32 187 1.7E-46 T 26-04-2016 IPR014956 Putative ParB-like nuclease PAM18_RS22870 9af90aaa8f4bbdefac4f7c87bced33b0 228 PIRSF PIRSF029669 15 228 4.7E-82 T 26-04-2016 IPR016932 Uncharacterised conserved protein UCP029669 PAM18_RS22870 9af90aaa8f4bbdefac4f7c87bced33b0 228 Gene3D G3DSA:3.90.1530.10 24 154 1.9E-41 T 26-04-2016 PAM18_RS14730 5aafceee4d200023f55da18c602167db 69 Pfam PF13396 Phospholipase_D-nuclease N-terminal 21 59 6.2E-10 T 26-04-2016 IPR027379 Cardiolipin synthase N-terminal PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 348 365 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 320 339 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 216 239 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 111 137 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 139 158 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 380 399 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 164 185 3.1E-59 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 Pfam PF01566 Natural resistance-associated macrophage protein 52 409 6.5E-127 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 PANTHER PTHR11706 2 438 1.4E-205 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 404 4.8E-114 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS21590 8d5c9274fa3327084e6a744498f0cf95 438 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 23 436 40.216 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 PAM18_RS09775 dee3d0a070d1a6388161a39ad95bba8a 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 452 1.4E-157 T 26-04-2016 IPR031617 Putative exopolysaccharide exporter PAM18_RS19490 c9692254eb0e9fde97654318af441c1c 420 SUPERFAMILY SSF52777 50 207 4.34E-7 T 26-04-2016 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 TIGRFAM TIGR01773 GABAperm: GABA permease 1 461 2.7E-253 T 26-04-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 PANTHER PTHR11785 9 475 5.2E-283 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 PIRSF PIRSF006060 8 472 9.6E-74 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 Pfam PF00324 Amino acid permease 26 449 2.2E-117 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 PAM18_RS00655 5a849b0b8d3c0807f1037ae04119460a 475 PANTHER PTHR11785:SF24 9 475 5.2E-283 T 26-04-2016 PAM18_RS02590 22bde135cfc76473fe5ba13c9dbf58f7 171 PANTHER PTHR30154 1 162 6.3E-60 T 26-04-2016 PAM18_RS02590 22bde135cfc76473fe5ba13c9dbf58f7 171 PANTHER PTHR30154:SF27 1 162 6.3E-60 T 26-04-2016 PAM18_RS02590 22bde135cfc76473fe5ba13c9dbf58f7 171 Gene3D G3DSA:1.10.10.10 31 63 4.5E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS01420 9e24c29ec88ddfa43963f5ef4e5e523a 60 Pfam PF10055 Uncharacterized small protein (DUF2292) 17 52 1.1E-17 T 26-04-2016 IPR018743 Protein of unknown function DUF2292 PAM18_RS24085 f9299c5a889109451aef270f1a5d6774 323 Pfam PF02625 XdhC and CoxI family 19 69 1.9E-14 T 26-04-2016 IPR003777 XdhC- CoxI PAM18_RS24085 f9299c5a889109451aef270f1a5d6774 323 Pfam PF13478 XdhC Rossmann domain 169 311 7.7E-35 T 26-04-2016 IPR027051 XdhC Rossmann domain PAM18_RS24085 f9299c5a889109451aef270f1a5d6774 323 PANTHER PTHR30388 5 323 2.6E-106 T 26-04-2016 PAM18_RS24085 f9299c5a889109451aef270f1a5d6774 323 PANTHER PTHR30388:SF4 5 323 2.6E-106 T 26-04-2016 PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 PANTHER PTHR18901 11 220 7.1E-95 T 26-04-2016 PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 Gene3D G3DSA:3.40.50.1000 81 218 6.5E-41 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 Gene3D G3DSA:1.10.150.240 22 80 8.8E-24 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 SUPERFAMILY SSF56784 7 220 2.76E-55 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 PANTHER PTHR18901:SF23 11 220 7.1E-95 T 26-04-2016 PAM18_RS00335 b4785111d1a01d49a2552e2696283807 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 189 1.5E-25 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PANTHER PTHR10339:SF23 101 394 4.7E-60 T 26-04-2016 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 Pfam PF03496 ADP-ribosyltransferase exoenzyme 243 428 1.7E-37 T 26-04-2016 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PANTHER PTHR10339 101 394 4.7E-60 T 26-04-2016 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 SUPERFAMILY SSF47233 95 229 2.35E-52 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 Pfam PF03545 Yersinia virulence determinant (YopE) 129 198 1.1E-32 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 39 56 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 84 101 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 23 36 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 178 196 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 212 229 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 129 146 5.0E-40 T 26-04-2016 IPR003537 Yersinia virulence determinant YopE GO:0005096 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 SUPERFAMILY SSF56399 233 423 6.17E-36 T 26-04-2016 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 Gene3D G3DSA:3.90.176.10 262 410 3.2E-24 T 26-04-2016 PAM18_RS05565 73a767bf3eea9d6583466d11580dcb3a 453 Gene3D G3DSA:1.20.120.260 96 228 1.6E-53 T 26-04-2016 IPR014773 Virulence factor YopE uncharacterised domain PAM18_RS10160 dbd1ae8ba85b261002113ed3b38f7e1e 211 PANTHER PTHR30625:SF0 1 195 8.3E-63 T 26-04-2016 PAM18_RS10160 dbd1ae8ba85b261002113ed3b38f7e1e 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 187 7.4E-35 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS10160 dbd1ae8ba85b261002113ed3b38f7e1e 211 PANTHER PTHR30625 1 195 8.3E-63 T 26-04-2016 PAM18_RS20130 173349794ea864d41b88b17395719335 128 SUPERFAMILY SSF160214 52 127 8.5E-24 T 26-04-2016 IPR005186 FlaG protein PAM18_RS20130 173349794ea864d41b88b17395719335 128 Pfam PF03646 FlaG protein 36 125 3.5E-24 T 26-04-2016 IPR005186 FlaG protein PAM18_RS20130 173349794ea864d41b88b17395719335 128 Gene3D G3DSA:3.30.160.170 50 124 1.5E-24 T 26-04-2016 IPR005186 FlaG protein PAM18_RS20130 173349794ea864d41b88b17395719335 128 PANTHER PTHR37166 1 128 5.0E-22 T 26-04-2016 PAM18_RS20130 173349794ea864d41b88b17395719335 128 PANTHER PTHR37166:SF1 1 128 5.0E-22 T 26-04-2016 PAM18_RS16545 1e7654f2fba477385067e6905122e522 253 Gene3D G3DSA:3.40.50.150 90 218 8.6E-9 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16545 1e7654f2fba477385067e6905122e522 253 Pfam PF08241 Methyltransferase domain 82 131 1.7E-6 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS16545 1e7654f2fba477385067e6905122e522 253 SUPERFAMILY SSF53335 90 178 1.44E-14 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS10175 7b60f349e2edc62aff1b7b793a8b2503 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.286 T 26-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PAM18_RS10175 7b60f349e2edc62aff1b7b793a8b2503 61 Gene3D G3DSA:2.20.25.10 8 58 3.1E-25 T 26-04-2016 PAM18_RS10175 7b60f349e2edc62aff1b7b793a8b2503 61 SUPERFAMILY SSF158997 1 54 1.05E-20 T 26-04-2016 PAM18_RS10175 7b60f349e2edc62aff1b7b793a8b2503 61 Pfam PF03966 Trm112p-like protein 2 41 4.0E-10 T 26-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 PAM18_RS10175 7b60f349e2edc62aff1b7b793a8b2503 61 PANTHER PTHR33505 1 58 2.4E-27 T 26-04-2016 PAM18_RS07355 8166ebdb4dd905065c5a83aba58c3688 137 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 5 125 20.714 T 26-04-2016 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF UniPathway: UPA00030 PAM18_RS07355 8166ebdb4dd905065c5a83aba58c3688 137 Pfam PF00893 Small Multidrug Resistance protein 44 112 5.4E-7 T 26-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 PAM18_RS07355 8166ebdb4dd905065c5a83aba58c3688 137 SUPERFAMILY SSF103481 37 122 8.37E-12 T 26-04-2016 PAM18_RS06405 5db55d83f1e7efdc2bbacb250247797e 231 Pfam PF06904 Extensin-like protein C-terminus 60 231 5.5E-61 T 26-04-2016 IPR009683 Extensin-like, C-terminal PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 SMART SM00342 172 253 1.2E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 Gene3D G3DSA:1.10.10.60 210 258 2.6E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 SUPERFAMILY SSF51182 14 177 3.26E-14 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 SUPERFAMILY SSF46689 210 257 3.36E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 Pfam PF02311 AraC-like ligand binding domain 24 105 3.7E-7 T 26-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 Pfam PF12833 Helix-turn-helix domain 178 254 6.7E-21 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 Gene3D G3DSA:1.10.10.60 151 209 5.9E-11 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 Gene3D G3DSA:2.60.120.10 21 88 2.8E-11 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 PANTHER PTHR11019 6 261 1.9E-123 T 26-04-2016 PAM18_RS21325 57b447c15be762ca1ee98129196fbdcb 262 PANTHER PTHR11019:SF99 6 261 1.9E-123 T 26-04-2016 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 Gene3D G3DSA:1.20.1250.20 239 424 1.2E-12 T 26-04-2016 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 Gene3D G3DSA:1.20.1250.20 19 218 6.7E-42 T 26-04-2016 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 PANTHER PTHR11662 13 424 2.8E-147 T 26-04-2016 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 Pfam PF07690 Major Facilitator Superfamily 26 390 6.9E-42 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 PANTHER PTHR11662:SF3 13 424 2.8E-147 T 26-04-2016 PAM18_RS14490 626896696943a3ab6f9326eeebf88b75 440 SUPERFAMILY SSF103473 18 425 8.76E-72 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS11075 e297793d975b817ad77015d0689002f0 87 Pfam PF14357 Domain of unknown function (DUF4404) 7 87 3.0E-27 T 26-04-2016 IPR025516 Protein of unknown function DUF4404 PAM18_RS16635 38e30e59d6bdfeb2aa598e213ddd5faf 612 PANTHER PTHR22935:SF73 19 467 0.0 T 26-04-2016 PAM18_RS16635 38e30e59d6bdfeb2aa598e213ddd5faf 612 SUPERFAMILY SSF56601 34 383 1.5E-70 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS16635 38e30e59d6bdfeb2aa598e213ddd5faf 612 Pfam PF00144 Beta-lactamase 43 380 6.9E-61 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS16635 38e30e59d6bdfeb2aa598e213ddd5faf 612 PANTHER PTHR22935 19 467 0.0 T 26-04-2016 PAM18_RS16635 38e30e59d6bdfeb2aa598e213ddd5faf 612 Gene3D G3DSA:3.40.710.10 27 380 1.8E-73 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 SUPERFAMILY SSF51679 4 433 3.27E-103 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 Gene3D G3DSA:3.20.20.30 348 433 8.2E-99 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 Gene3D G3DSA:3.20.20.30 1 305 8.2E-99 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 Pfam PF00296 Luciferase-like monooxygenase 34 387 2.3E-51 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 PIRSF PIRSF000337 2 435 2.6E-150 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 PANTHER PTHR30011:SF28 1 432 1.4E-273 T 26-04-2016 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 20 428 8.7E-110 T 26-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 PAM18_RS03995 1e5dcd34b0bd57efcc78492d0f9928a4 435 PANTHER PTHR30011 1 432 1.4E-273 T 26-04-2016 PAM18_RS21275 6c0b3d15759ffb390b49e3a16df8e946 88 Pfam PF10976 Protein of unknown function (DUF2790) 8 86 5.8E-34 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS08405 d4bc69718600003985d3d141201a13f1 441 Pfam PF00668 Condensation domain 206 297 1.1E-5 T 26-04-2016 IPR001242 Condensation domain PAM18_RS08405 d4bc69718600003985d3d141201a13f1 441 Pfam PF00668 Condensation domain 18 144 1.5E-11 T 26-04-2016 IPR001242 Condensation domain PAM18_RS08405 d4bc69718600003985d3d141201a13f1 441 SUPERFAMILY SSF52777 189 433 4.0E-37 T 26-04-2016 PAM18_RS08405 d4bc69718600003985d3d141201a13f1 441 SUPERFAMILY SSF52777 6 156 8.89E-23 T 26-04-2016 PAM18_RS24610 e0b47c623cadc6ac6246286fd5d26cd1 259 SUPERFAMILY SSF48452 159 255 6.07E-9 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS24610 e0b47c623cadc6ac6246286fd5d26cd1 259 Gene3D G3DSA:1.25.40.10 160 251 6.3E-10 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS13515 279c68664d40d905b41a7d3654d153e8 141 PIRSF PIRSF029509 1 141 2.9E-48 T 26-04-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane PAM18_RS05320 1c8b8c572e145ac1462cff449bca48c4 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 3.5E-23 T 26-04-2016 IPR012451 Protein of unknown function DUF1656 PAM18_RS04085 9d1996d344e1c53c660bec55b3c348fd 418 PANTHER PTHR34596 1 418 1.6E-173 T 26-04-2016 PAM18_RS04085 9d1996d344e1c53c660bec55b3c348fd 418 Gene3D G3DSA:2.40.160.10 32 418 6.0E-145 T 26-04-2016 IPR023614 Porin domain PAM18_RS04085 9d1996d344e1c53c660bec55b3c348fd 418 Pfam PF03573 outer membrane porin, OprD family 28 416 9.2E-150 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 PANTHER PTHR32308 7 275 4.9E-78 T 26-04-2016 IPR011206 Citrate lyase beta subunit-like PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 PIRSF PIRSF015582 1 275 3.0E-72 T 26-04-2016 IPR011206 Citrate lyase beta subunit-like PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 PANTHER PTHR32308:SF0 7 275 4.9E-78 T 26-04-2016 PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 215 9.9E-29 T 26-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 SUPERFAMILY SSF51621 4 227 7.68E-58 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS21230 61d517cb04fc31700c31a4db976fe97f 275 Gene3D G3DSA:3.20.20.60 4 227 1.5E-65 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS21575 1eec266e94759c31d4702c469cdb2c34 431 Pfam PF05853 beta-keto acid cleavage enzyme 44 136 2.3E-6 T 26-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 PAM18_RS21575 1eec266e94759c31d4702c469cdb2c34 431 Gene3D G3DSA:3.20.20.70 44 115 2.0E-7 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 PAM18_RS14625 300e30c9058240183c33abdc7fb4b551 184 SUPERFAMILY SSF52096 3 170 1.33E-29 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS14625 300e30c9058240183c33abdc7fb4b551 184 Gene3D G3DSA:3.90.226.10 3 168 8.9E-20 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS14625 300e30c9058240183c33abdc7fb4b551 184 Pfam PF00574 Clp protease 2 168 6.0E-15 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAM18_RS15995 b438f64cced42588e9028c286fa040fe 48 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 10 44 2.6E-9 T 26-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 SUPERFAMILY SSF51161 49 207 6.38E-33 T 26-04-2016 IPR011004 Trimeric LpxA-like PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 154 9.9E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 190 1.3E-6 T 26-04-2016 IPR001451 Hexapeptide repeat PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 PANTHER PTHR23416 122 207 3.6E-22 T 26-04-2016 PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 Gene3D G3DSA:2.160.10.10 110 207 3.6E-27 T 26-04-2016 PAM18_RS20185 a0b1d3242fd7f13ddd9fe592e3427754 210 Gene3D G3DSA:3.40.50.20 1 91 6.4E-7 T 26-04-2016 IPR016185 Pre-ATP-grasp domain PAM18_RS04715 97f44123089d6ace3dc25523fb9db5da 236 PANTHER PTHR30249 3 234 3.3E-100 T 26-04-2016 PAM18_RS04715 97f44123089d6ace3dc25523fb9db5da 236 PANTHER PTHR30249:SF5 3 234 3.3E-100 T 26-04-2016 PAM18_RS04715 97f44123089d6ace3dc25523fb9db5da 236 Pfam PF04172 LrgB-like family 21 233 8.2E-73 T 26-04-2016 IPR007300 CidB/LrgB family PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Gene3D G3DSA:1.10.287.130 277 306 6.3E-4 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Gene3D G3DSA:1.10.287.130 204 234 6.3E-4 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.0E-19 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 SMART SM00387 351 460 1.3E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 SUPERFAMILY SSF55874 300 460 4.98E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423 1 19 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423 192 236 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423 272 463 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 309 9.4E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 SUPERFAMILY SSF47384 278 309 1.92E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 SUPERFAMILY SSF47384 203 243 1.92E-5 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423:SF497 1 19 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423:SF497 192 236 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 PANTHER PTHR24423:SF497 272 463 1.6E-94 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Gene3D G3DSA:3.40.50.2300 19 156 3.3E-6 T 26-04-2016 PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 459 9.2E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS12445 ee039630aa20cf3b7058a02139a128fc 470 Gene3D G3DSA:3.30.565.10 314 458 2.5E-44 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 PANTHER PTHR13903:SF8 1 281 4.1E-119 T 26-04-2016 PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 Gene3D G3DSA:2.60.120.10 3 257 3.2E-82 T 26-04-2016 IPR014710 RmlC-like jelly roll fold PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 SUPERFAMILY SSF51182 7 281 1.85E-85 T 26-04-2016 IPR011051 RmlC-like cupin domain PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 PIRSF PIRSF006232 3 285 2.4E-97 T 26-04-2016 IPR012093 Pirin PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 PANTHER PTHR13903 1 281 4.1E-119 T 26-04-2016 IPR012093 Pirin PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 Pfam PF02678 Pirin 22 122 1.1E-37 T 26-04-2016 IPR003829 Pirin, N-terminal domain PAM18_RS08880 08774e98d416bf2b789f5d86d4484c2a 285 Pfam PF05726 Pirin C-terminal cupin domain 181 282 9.3E-33 T 26-04-2016 IPR008778 Pirin, C-terminal domain PAM18_RS24535 6681b4301aa2dc8ea84657da9cfa9a68 206 Pfam PF04403 Paraquat-inducible protein A 43 198 5.5E-56 T 26-04-2016 IPR007498 Paraquat-inducible protein A PAM18_RS24535 6681b4301aa2dc8ea84657da9cfa9a68 206 PANTHER PTHR30462 10 197 2.0E-61 T 26-04-2016 PAM18_RS24535 6681b4301aa2dc8ea84657da9cfa9a68 206 PANTHER PTHR30462:SF1 10 197 2.0E-61 T 26-04-2016 PAM18_RS02715 3f29bb5481b9f7f50b3d6f3c466bedf0 341 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 31 154 3.7E-41 T 26-04-2016 IPR007621 TPM domain PAM18_RS02715 3f29bb5481b9f7f50b3d6f3c466bedf0 341 PANTHER PTHR30373 1 341 7.5E-136 T 26-04-2016 PAM18_RS02715 3f29bb5481b9f7f50b3d6f3c466bedf0 341 PANTHER PTHR30373:SF2 1 341 7.5E-136 T 26-04-2016 PAM18_RS18145 b548c1af9a4994c1a0898efc7303d979 297 PANTHER PTHR22911:SF37 11 297 2.8E-113 T 26-04-2016 PAM18_RS18145 b548c1af9a4994c1a0898efc7303d979 297 PANTHER PTHR22911 11 297 2.8E-113 T 26-04-2016 PAM18_RS18145 b548c1af9a4994c1a0898efc7303d979 297 Pfam PF00892 EamA-like transporter family 150 280 1.5E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS18145 b548c1af9a4994c1a0898efc7303d979 297 SUPERFAMILY SSF103481 185 282 1.19E-7 T 26-04-2016 PAM18_RS18145 b548c1af9a4994c1a0898efc7303d979 297 SUPERFAMILY SSF103481 47 137 1.31E-6 T 26-04-2016 PAM18_RS09520 54b9dc6345f00a3994205900f151ca29 171 PANTHER PTHR36926:SF1 1 171 1.3E-73 T 26-04-2016 PAM18_RS09520 54b9dc6345f00a3994205900f151ca29 171 Pfam PF02674 Colicin V production protein 2 135 2.5E-33 T 26-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PAM18_RS09520 54b9dc6345f00a3994205900f151ca29 171 PANTHER PTHR36926 1 171 1.3E-73 T 26-04-2016 PAM18_RS28620 dbbbbf124553b6f914ac8488d6bd1bbe 409 PANTHER PTHR35793 2 409 1.1E-279 T 26-04-2016 PAM18_RS28620 dbbbbf124553b6f914ac8488d6bd1bbe 409 Pfam PF07670 Nucleoside recognition 52 157 1.1E-7 T 26-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 PAM18_RS28620 dbbbbf124553b6f914ac8488d6bd1bbe 409 PANTHER PTHR35793:SF2 2 409 1.1E-279 T 26-04-2016 PAM18_RS28620 dbbbbf124553b6f914ac8488d6bd1bbe 409 PIRSF PIRSF036542 1 409 1.4E-206 T 26-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB PAM18_RS16050 a175e2facfc64c2e3ed23f9c05e30f7d 383 Pfam PF03929 PepSY-associated TM region 12 360 4.1E-51 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS16050 a175e2facfc64c2e3ed23f9c05e30f7d 383 PANTHER PTHR34219:SF3 1 368 4.9E-117 T 26-04-2016 PAM18_RS16050 a175e2facfc64c2e3ed23f9c05e30f7d 383 PANTHER PTHR34219 1 368 4.9E-117 T 26-04-2016 PAM18_RS12410 0bbccb2917ed2e6de84c76f98547316a 186 SUPERFAMILY SSF55729 10 179 4.01E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS12410 0bbccb2917ed2e6de84c76f98547316a 186 PANTHER PTHR23091 1 176 1.0E-66 T 26-04-2016 PAM18_RS12410 0bbccb2917ed2e6de84c76f98547316a 186 PANTHER PTHR23091:SF218 1 176 1.0E-66 T 26-04-2016 PAM18_RS12410 0bbccb2917ed2e6de84c76f98547316a 186 Pfam PF00583 Acetyltransferase (GNAT) family 71 150 2.5E-15 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS12410 0bbccb2917ed2e6de84c76f98547316a 186 Gene3D G3DSA:3.40.630.30 11 180 7.6E-34 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS28175 efcc43d337b703620e18ad65dae82ca8 224 Pfam PF06267 Family of unknown function (DUF1028) 2 191 6.1E-69 T 26-04-2016 IPR010430 Protein of unknown function DUF1028 PAM18_RS28175 efcc43d337b703620e18ad65dae82ca8 224 PANTHER PTHR39328:SF1 2 224 1.4E-89 T 26-04-2016 PAM18_RS28175 efcc43d337b703620e18ad65dae82ca8 224 SUPERFAMILY SSF56235 1 224 4.24E-80 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS28175 efcc43d337b703620e18ad65dae82ca8 224 Gene3D G3DSA:3.60.20.10 1 214 3.5E-84 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal PAM18_RS28175 efcc43d337b703620e18ad65dae82ca8 224 PANTHER PTHR39328 2 224 1.4E-89 T 26-04-2016 PAM18_RS05610 b905eda19b1950ffff1d7f59eb319847 142 SUPERFAMILY SSF102400 2 139 2.48E-42 T 26-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PAM18_RS05610 b905eda19b1950ffff1d7f59eb319847 142 PANTHER PTHR38767 2 142 4.9E-64 T 26-04-2016 PAM18_RS05610 b905eda19b1950ffff1d7f59eb319847 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 135 6.9E-38 T 26-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PAM18_RS05610 b905eda19b1950ffff1d7f59eb319847 142 Gene3D G3DSA:3.40.50.10110 2 138 1.8E-45 T 26-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 PAM18_RS09450 882bdfc6dc1dbdd0cadfba69df983197 125 PANTHER PTHR11803 15 124 1.1E-38 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS09450 882bdfc6dc1dbdd0cadfba69df983197 125 Gene3D G3DSA:3.30.1330.40 13 123 2.9E-34 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS09450 882bdfc6dc1dbdd0cadfba69df983197 125 SUPERFAMILY SSF55298 13 124 5.5E-34 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS09450 882bdfc6dc1dbdd0cadfba69df983197 125 Pfam PF01042 Endoribonuclease L-PSP 15 120 8.2E-28 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS25475 a6a18ccb0a32d77bc868446e33eeb3cb 172 Gene3D G3DSA:3.40.630.30 3 168 2.9E-41 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS25475 a6a18ccb0a32d77bc868446e33eeb3cb 172 SUPERFAMILY SSF55729 5 169 1.18E-35 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS25475 a6a18ccb0a32d77bc868446e33eeb3cb 172 PANTHER PTHR23091 1 169 7.0E-93 T 26-04-2016 PAM18_RS25475 a6a18ccb0a32d77bc868446e33eeb3cb 172 PANTHER PTHR23091:SF187 1 169 7.0E-93 T 26-04-2016 PAM18_RS25475 a6a18ccb0a32d77bc868446e33eeb3cb 172 Pfam PF13420 Acetyltransferase (GNAT) domain 5 157 1.9E-22 T 26-04-2016 PAM18_RS27460 a1bfc6562139f494212b15017bb8bbba 352 ProDom PD032367 ALGINATE REGULATORY ALGR3 ALGP TRANSCRIPTION TRANSCRIPTIONAL DNA-BINDING ACTIVATOR KINASES KINASE 1 123 2.0E-47 T 26-04-2016 PAM18_RS25220 411e67e4f4d5092b82cfb9be693df8c4 411 Pfam PF08874 Domain of unknown function (DUF1835) 89 201 2.6E-14 T 26-04-2016 IPR014973 Protein of unknown function DUF1835 PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 PANTHER PTHR13754:SF15 1 252 4.4E-90 T 26-04-2016 PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 Pfam PF12706 Beta-lactamase superfamily domain 22 204 1.4E-23 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 SUPERFAMILY SSF56281 1 222 9.83E-43 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 SMART SM00849 11 162 1.3E-14 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 PANTHER PTHR13754 1 252 4.4E-90 T 26-04-2016 PAM18_RS20605 aea03359d7c528a1844aebeeb368e92d 252 Gene3D G3DSA:3.60.15.10 1 224 6.3E-35 T 26-04-2016 IPR001279 Metallo-beta-lactamase PAM18_RS24245 95a5d2f1b9443dc1274e4fa85e61575f 182 SMART SM00972 118 179 1.7E-18 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS24245 95a5d2f1b9443dc1274e4fa85e61575f 182 PANTHER PTHR37089:SF2 1 182 2.4E-142 T 26-04-2016 PAM18_RS24245 95a5d2f1b9443dc1274e4fa85e61575f 182 PANTHER PTHR37089 1 182 2.4E-142 T 26-04-2016 PAM18_RS24245 95a5d2f1b9443dc1274e4fa85e61575f 182 Pfam PF05229 Spore Coat Protein U domain 29 179 1.0E-32 T 26-04-2016 IPR007893 Spore coat protein U PAM18_RS01380 23a56591701a20c65d6980129360774c 171 PANTHER PTHR28026:SF3 1 170 2.9E-71 T 26-04-2016 PAM18_RS01380 23a56591701a20c65d6980129360774c 171 Pfam PF06127 Protein of unknown function (DUF962) 1 143 1.4E-27 T 26-04-2016 IPR009305 Protein of unknown function DUF962 PAM18_RS01380 23a56591701a20c65d6980129360774c 171 PANTHER PTHR28026 1 170 2.9E-71 T 26-04-2016 PAM18_RS11875 795d9e4e833292b3dba2844f802251f4 397 Pfam PF05940 NnrS protein 14 391 8.6E-113 T 26-04-2016 IPR010266 NnrS PAM18_RS11940 7a2da925088de19a8eb9e133ff8f742c 467 Pfam PF01139 tRNA-splicing ligase RtcB 67 466 5.3E-91 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS11940 7a2da925088de19a8eb9e133ff8f742c 467 SUPERFAMILY SSF103365 39 467 3.01E-102 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS11940 7a2da925088de19a8eb9e133ff8f742c 467 PANTHER PTHR11118 42 467 3.6E-85 T 26-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PAM18_RS09630 58d564d783c8927e7a3ec7fe0cebc9a3 299 Gene3D G3DSA:3.40.50.1100 85 295 7.0E-39 T 26-04-2016 PAM18_RS09630 58d564d783c8927e7a3ec7fe0cebc9a3 299 Gene3D G3DSA:3.40.50.1100 48 84 2.2E-4 T 26-04-2016 PAM18_RS09630 58d564d783c8927e7a3ec7fe0cebc9a3 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 283 3.6E-15 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS09630 58d564d783c8927e7a3ec7fe0cebc9a3 299 PIRSF PIRSF006278 1 298 4.1E-72 T 26-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PAM18_RS09630 58d564d783c8927e7a3ec7fe0cebc9a3 299 SUPERFAMILY SSF53686 8 294 2.12E-55 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAM18_RS06825 b729cef95cfc6003320e7533f500ec46 88 Gene3D G3DSA:1.10.260.40 28 81 1.4E-10 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS04990 d22255dec2047cb3246c645958b72f40 379 Gene3D G3DSA:3.60.10.10 68 374 6.1E-9 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS04990 d22255dec2047cb3246c645958b72f40 379 SUPERFAMILY SSF56219 73 375 4.19E-27 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS04990 d22255dec2047cb3246c645958b72f40 379 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 354 2.2E-16 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 SUPERFAMILY SSF103481 50 147 1.96E-11 T 26-04-2016 PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 PANTHER PTHR32322 6 300 1.2E-182 T 26-04-2016 PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 PANTHER PTHR32322:SF10 6 300 1.2E-182 T 26-04-2016 PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 Pfam PF00892 EamA-like transporter family 162 294 2.8E-10 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 Pfam PF00892 EamA-like transporter family 22 146 5.5E-14 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS19255 6bf2c5c8fa7e1d53041896db6b3eec60 300 SUPERFAMILY SSF103481 214 298 4.18E-8 T 26-04-2016 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 SMART SM00342 247 329 2.1E-29 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 SUPERFAMILY SSF46689 283 331 5.38E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 Pfam PF12833 Helix-turn-helix domain 253 331 2.3E-22 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 Gene3D G3DSA:1.10.10.60 283 332 2.8E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 6.0E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 6.0E-7 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PANTHER PTHR11019 209 337 1.2E-32 T 26-04-2016 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PANTHER PTHR11019 7 80 1.2E-32 T 26-04-2016 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PANTHER PTHR11019:SF52 209 337 1.2E-32 T 26-04-2016 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 PANTHER PTHR11019:SF52 7 80 1.2E-32 T 26-04-2016 PAM18_RS09005 542f3a8b1845259e8b54e8e2dd3d8f3c 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 1.3E-45 T 26-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 3.0E-26 T 26-04-2016 IPR001498 Impact, N-terminal PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 SUPERFAMILY SSF54980 127 195 3.96E-11 T 26-04-2016 IPR009022 Elongation factor G, III-V domain PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 SUPERFAMILY SSF54211 7 119 2.73E-37 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 Pfam PF09186 Domain of unknown function (DUF1949) 133 188 2.9E-11 T 26-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 Gene3D G3DSA:3.30.230.30 4 120 2.8E-42 T 26-04-2016 IPR001498 Impact, N-terminal PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 26-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 PANTHER PTHR16301 4 196 2.5E-57 T 26-04-2016 IPR023582 Impact family PAM18_RS00850 5c65f2813543dcc239661f08313ddcb3 196 Gene3D G3DSA:3.30.70.240 127 195 1.3E-13 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain PAM18_RS08210 e66c3a43599018844e6fbe4bfbbaf586 172 Gene3D G3DSA:3.40.630.30 29 171 1.1E-37 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08210 e66c3a43599018844e6fbe4bfbbaf586 172 SUPERFAMILY SSF55729 28 167 1.68E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase PAM18_RS08210 e66c3a43599018844e6fbe4bfbbaf586 172 Pfam PF00583 Acetyltransferase (GNAT) family 78 161 3.4E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 PAM18_RS08210 e66c3a43599018844e6fbe4bfbbaf586 172 PANTHER PTHR23091:SF236 1 165 6.7E-65 T 26-04-2016 PAM18_RS08210 e66c3a43599018844e6fbe4bfbbaf586 172 PANTHER PTHR23091 1 165 6.7E-65 T 26-04-2016 PAM18_RS13490 ca808f2db543c76144e43a2e5e0a699c 472 Pfam PF03573 outer membrane porin, OprD family 52 470 2.2E-136 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS13490 ca808f2db543c76144e43a2e5e0a699c 472 Gene3D G3DSA:2.40.160.10 57 472 4.1E-118 T 26-04-2016 IPR023614 Porin domain PAM18_RS13490 ca808f2db543c76144e43a2e5e0a699c 472 PANTHER PTHR34596 4 28 1.0E-160 T 26-04-2016 PAM18_RS13490 ca808f2db543c76144e43a2e5e0a699c 472 PANTHER PTHR34596 47 472 1.0E-160 T 26-04-2016 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 PANTHER PTHR30203 5 468 8.6E-302 T 26-04-2016 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 PANTHER PTHR30203:SF10 5 468 8.6E-302 T 26-04-2016 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 Pfam PF02321 Outer membrane efflux protein 279 458 8.8E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 Pfam PF02321 Outer membrane efflux protein 58 252 1.3E-27 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 Gene3D G3DSA:1.20.1600.10 48 464 2.2E-108 T 26-04-2016 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 SUPERFAMILY SSF56954 2 463 7.19E-105 T 26-04-2016 PAM18_RS13630 3971fced1b917ba17df66feab725696b 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 460 1.3E-104 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS16375 4eb91c15e3e549967b37f3092d767509 762 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 79 761 2.5E-288 T 26-04-2016 IPR010706 Fatty acid cis-trans isomerase PAM18_RS16810 8b1f490aa3ba253d5ba167e349708427 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 4.8E-77 T 26-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PAM18_RS16810 8b1f490aa3ba253d5ba167e349708427 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 77.752 T 26-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein PAM18_RS16810 8b1f490aa3ba253d5ba167e349708427 272 PANTHER PTHR31756:SF3 1 272 3.9E-114 T 26-04-2016 PAM18_RS16810 8b1f490aa3ba253d5ba167e349708427 272 PANTHER PTHR31756 1 272 3.9E-114 T 26-04-2016 PAM18_RS27730 15bf10cc1ec461a5628ea268dbdb8b50 855 Pfam PF11739 Dicarboxylate transport 634 839 1.6E-59 T 26-04-2016 IPR021730 Dicarboxylate transport PAM18_RS28660 5f178c4ee5b8cedaa0741692f4ecddb9 197 Pfam PF01914 MarC family integral membrane protein 4 192 1.6E-42 T 26-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PAM18_RS28660 5f178c4ee5b8cedaa0741692f4ecddb9 197 PANTHER PTHR33508:SF4 1 197 1.1E-82 T 26-04-2016 PAM18_RS28660 5f178c4ee5b8cedaa0741692f4ecddb9 197 PANTHER PTHR33508 1 197 1.1E-82 T 26-04-2016 PAM18_RS04825 95345d610ae3968f7f6db3a07e3cacf1 50 Pfam PF03889 Domain of unknown function 5 40 2.2E-18 T 26-04-2016 IPR005589 Protein of unknown function DUF331 PAM18_RS27655 5688740d8b0bf15edd18b1e54c8029fe 349 Gene3D G3DSA:3.40.50.1000 43 65 1.9E-9 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27655 5688740d8b0bf15edd18b1e54c8029fe 349 Gene3D G3DSA:3.40.50.1000 163 295 1.9E-9 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS27655 5688740d8b0bf15edd18b1e54c8029fe 349 SUPERFAMILY SSF56784 27 220 9.63E-12 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.921 T 26-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 SUPERFAMILY SSF51278 1 100 1.26E-47 T 26-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 PANTHER PTHR33569:SF1 1 101 6.7E-66 T 26-04-2016 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 Pfam PF00699 Urease beta subunit 3 99 7.9E-46 T 26-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 Gene3D G3DSA:2.10.150.10 1 100 4.6E-50 T 26-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 1.4E-45 T 26-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 PAM18_RS25480 8944f312800d641e129d7d1dfa4628ff 101 PANTHER PTHR33569 1 101 6.7E-66 T 26-04-2016 PAM18_RS00300 d575e43cfe8c0393ba58df60fdbd6587 234 Gene3D G3DSA:3.40.30.10 8 47 7.5E-4 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00300 d575e43cfe8c0393ba58df60fdbd6587 234 Gene3D G3DSA:3.40.30.10 169 190 7.5E-4 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00300 d575e43cfe8c0393ba58df60fdbd6587 234 SUPERFAMILY SSF52833 4 210 3.23E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS00300 d575e43cfe8c0393ba58df60fdbd6587 234 Pfam PF01323 DSBA-like thioredoxin domain 10 187 5.3E-6 T 26-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 PAM18_RS00300 d575e43cfe8c0393ba58df60fdbd6587 234 Gene3D G3DSA:1.10.472.60 48 168 1.8E-32 T 26-04-2016 IPR023169 UPF0413, central domain PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 169 1.9E-18 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 SMART SM00644 18 169 9.3E-60 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 PANTHER PTHR30417 8 181 3.1E-87 T 26-04-2016 PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 Gene3D G3DSA:3.40.80.10 7 181 5.1E-68 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 PANTHER PTHR30417:SF4 8 181 3.1E-87 T 26-04-2016 PAM18_RS23560 f1b007dd5241a8459ea30b2019210621 188 SUPERFAMILY SSF55846 7 181 1.31E-65 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 PAM18_RS22705 c319c1a95ecd54434c9dcbe4e1921677 190 PANTHER PTHR38764 2 187 1.3E-86 T 26-04-2016 PAM18_RS22705 c319c1a95ecd54434c9dcbe4e1921677 190 PANTHER PTHR38764:SF1 2 187 1.3E-86 T 26-04-2016 PAM18_RS22705 c319c1a95ecd54434c9dcbe4e1921677 190 PIRSF PIRSF011489 1 190 3.7E-82 T 26-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PAM18_RS22705 c319c1a95ecd54434c9dcbe4e1921677 190 Pfam PF04336 Protein of unknown function, DUF479 81 184 2.3E-34 T 26-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 PAM18_RS06900 d77a42cb1d66a94b04b5a47d8d28e94a 575 Pfam PF03354 Phage Terminase 87 557 6.9E-68 T 26-04-2016 IPR005021 Phage terminase PAM18_RS06900 d77a42cb1d66a94b04b5a47d8d28e94a 575 PANTHER PTHR41287 1 575 7.6E-160 T 26-04-2016 PAM18_RS06810 f91a251a5797ecee0baf723a4a72e2a0 84 Pfam PF07867 Protein of unknown function (DUF1654) 14 79 6.2E-23 T 26-04-2016 IPR012449 Bacteriophage F116, Orf28 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 Pfam PF05787 Bacterial protein of unknown function (DUF839) 85 636 8.4E-196 T 26-04-2016 IPR008557 Protein of unknown function DUF839 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 PANTHER PTHR35399 6 672 0.0 T 26-04-2016 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 Gene3D G3DSA:2.120.10.30 559 624 1.2E-7 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 Gene3D G3DSA:2.120.10.30 415 522 1.2E-7 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 PANTHER PTHR35399:SF2 6 672 0.0 T 26-04-2016 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 SUPERFAMILY SSF63829 474 520 3.17E-13 T 26-04-2016 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 SUPERFAMILY SSF63829 345 435 3.17E-13 T 26-04-2016 PAM18_RS12020 6fa0a7f1a5122be10c1e103912e5d8ac 672 SUPERFAMILY SSF63829 557 636 3.17E-13 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 466 1.3E-94 T 26-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 PANTHER PTHR30203:SF13 1 485 1.0E-232 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:2.20.200.10 102 143 9.4E-12 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:2.20.200.10 317 350 9.4E-12 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:1.20.1600.10 144 316 3.7E-86 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:1.20.1600.10 55 92 3.7E-86 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:1.20.1600.10 353 465 3.7E-86 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 PANTHER PTHR30203 1 485 1.0E-232 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 SUPERFAMILY SSF56954 5 466 1.83E-94 T 26-04-2016 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Pfam PF02321 Outer membrane efflux protein 285 464 2.9E-21 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS03730 de7a64c24ece364cc0a5f73a3925f72f 487 Pfam PF02321 Outer membrane efflux protein 68 253 1.8E-26 T 26-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 PAM18_RS07980 137893beae7a1acd36d0669a92f3c588 88 Pfam PF07130 YebG protein 1 72 2.3E-26 T 26-04-2016 IPR009813 Uncharacterised protein family YebG PAM18_RS07980 137893beae7a1acd36d0669a92f3c588 88 Gene3D G3DSA:1.10.10.710 18 86 2.0E-27 T 26-04-2016 IPR009813 Uncharacterised protein family YebG PAM18_RS14125 bcd465bb898dc1e3bcd10bc84a947e52 93 Pfam PF06155 Protein of unknown function (DUF971) 13 90 8.9E-22 T 26-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 PAM18_RS21540 8acbddc23a63770f537fbfd1fbbb0336 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 7.3E-21 T 26-04-2016 IPR009241 Toxin HigB-like PAM18_RS08635 13cf00c63dcbd80775a28dc3d377ff9a 79 Pfam PF13490 Putative zinc-finger 4 38 2.9E-8 T 26-04-2016 IPR027383 Putative zinc-finger PAM18_RS20520 55d84c45c734c14ddfab16c60bc93623 158 Gene3D G3DSA:3.10.50.30 81 157 1.1E-7 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PAM18_RS20520 55d84c45c734c14ddfab16c60bc93623 158 SUPERFAMILY SSF54534 85 145 2.35E-6 T 26-04-2016 PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 SUPERFAMILY SSF52540 1 235 7.34E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 Gene3D G3DSA:3.40.50.300 1 236 1.6E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 PANTHER PTHR24220 3 243 4.5E-156 T 26-04-2016 PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 SMART SM00382 26 213 1.0E-18 T 26-04-2016 IPR003593 AAA+ ATPase domain PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 PANTHER PTHR24220:SF447 3 243 4.5E-156 T 26-04-2016 PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 PIRSF PIRSF039085 1 241 2.3E-104 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PAM18_RS03810 2bbff6f1c38177503c5cc3f303810e83 247 Pfam PF00005 ABC transporter 18 165 1.8E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 Pfam PF00535 Glycosyl transferase family 2 249 431 1.6E-23 T 26-04-2016 IPR001173 Glycosyltransferase 2-like PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 72 748 52.273 T 26-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 PANTHER PTHR10587 470 748 1.0E-158 T 26-04-2016 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 PANTHER PTHR10587 152 421 1.0E-158 T 26-04-2016 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 PANTHER PTHR10587:SF63 470 748 1.0E-158 T 26-04-2016 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 PANTHER PTHR10587:SF63 152 421 1.0E-158 T 26-04-2016 PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 SUPERFAMILY SSF53448 247 533 8.06E-29 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS26550 c3861ce16f4fe42fee4fd296d8649e69 861 Gene3D G3DSA:3.90.550.10 342 385 7.5E-5 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases PAM18_RS17155 8b970db150ffb5b89e62797058fed54b 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 2.1E-47 T 26-04-2016 IPR012673 Type III secretion system chaperone SycN GO:0009306 PAM18_RS17155 8b970db150ffb5b89e62797058fed54b 123 SUPERFAMILY SSF69635 2 121 3.45E-40 T 26-04-2016 PAM18_RS08035 7743ca3a3257e3530404f304262a3de2 161 PANTHER PTHR37819 10 149 3.0E-51 T 26-04-2016 PAM18_RS08035 7743ca3a3257e3530404f304262a3de2 161 PIRSF PIRSF029598 2 145 7.1E-40 T 26-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 PAM18_RS08035 7743ca3a3257e3530404f304262a3de2 161 PANTHER PTHR37819:SF1 10 149 3.0E-51 T 26-04-2016 PAM18_RS08035 7743ca3a3257e3530404f304262a3de2 161 Pfam PF06146 Phosphate-starvation-inducible E 59 127 2.2E-17 T 26-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like PAM18_RS04260 acb9432348542e8bc3c758f6638223bc 209 Pfam PF01794 Ferric reductase like transmembrane component 52 161 1.3E-6 T 26-04-2016 IPR013130 Ferric reductase transmembrane component-like domain PAM18_RS07625 a422b3c7fa8e259799dc9eff4b74b82b 266 Pfam PF14257 Domain of unknown function (DUF4349) 25 250 3.2E-24 T 26-04-2016 IPR025645 Domain of unknown function DUF4349 PAM18_RS02630 6cd70c5ed376a551b3443eb30c54645a 260 PANTHER PTHR22908 5 252 1.5E-54 T 26-04-2016 PAM18_RS02630 6cd70c5ed376a551b3443eb30c54645a 260 SUPERFAMILY SSF52540 14 232 1.45E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS02630 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF07728 AAA domain (dynein-related subfamily) 27 161 1.6E-31 T 26-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PAM18_RS02630 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 174 257 1.1E-30 T 26-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal PAM18_RS02630 6cd70c5ed376a551b3443eb30c54645a 260 Gene3D G3DSA:3.40.50.300 14 178 5.6E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS25705 7e8e5737842ac8c27fbc7562a683bb8b 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 2.4E-50 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS25705 7e8e5737842ac8c27fbc7562a683bb8b 304 PANTHER PTHR11795 4 304 5.2E-136 T 26-04-2016 PAM18_RS25705 7e8e5737842ac8c27fbc7562a683bb8b 304 PANTHER PTHR11795:SF371 4 304 5.2E-136 T 26-04-2016 PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.30.30.40 45 113 9.3E-37 T 26-04-2016 PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 2.5E-17 T 26-04-2016 IPR013987 PhnA protein, N-terminal PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.5E-50 T 26-04-2016 IPR004624 PhnA protein PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF57783 3 37 2.13E-15 T 26-04-2016 PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF03831 PhnA domain 46 113 6.7E-33 T 26-04-2016 IPR013988 PhnA protein, C-terminal PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.20.25.10 2 41 8.0E-24 T 26-04-2016 PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF82057 41 113 9.16E-29 T 26-04-2016 PAM18_RS00650 f48df482eaaaff8ac9096770d1b37901 113 PANTHER PTHR30305 2 113 2.8E-86 T 26-04-2016 PAM18_RS08475 31e4fb52c23b06a7ee3bb9398dad7ac5 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 274 4.4E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08475 31e4fb52c23b06a7ee3bb9398dad7ac5 277 Gene3D G3DSA:1.10.3720.10 70 276 7.2E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08475 31e4fb52c23b06a7ee3bb9398dad7ac5 277 PANTHER PTHR30043 1 276 4.9E-98 T 26-04-2016 PAM18_RS08475 31e4fb52c23b06a7ee3bb9398dad7ac5 277 SUPERFAMILY SSF161098 70 268 1.44E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08475 31e4fb52c23b06a7ee3bb9398dad7ac5 277 PANTHER PTHR30043:SF1 1 276 4.9E-98 T 26-04-2016 PAM18_RS07680 128699c7f42060ccb8f3ddceda86bb0d 198 PANTHER PTHR21666 66 185 4.0E-44 T 26-04-2016 PAM18_RS07680 128699c7f42060ccb8f3ddceda86bb0d 198 PANTHER PTHR21666 36 50 4.0E-44 T 26-04-2016 PAM18_RS07680 128699c7f42060ccb8f3ddceda86bb0d 198 Gene3D G3DSA:3.90.1720.10 59 187 1.1E-47 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS07680 128699c7f42060ccb8f3ddceda86bb0d 198 Pfam PF00877 NlpC/P60 family 75 181 4.5E-32 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS07680 128699c7f42060ccb8f3ddceda86bb0d 198 SUPERFAMILY SSF54001 58 185 2.94E-43 T 26-04-2016 PAM18_RS09725 6d79e086ec471816786f8d52afdd0511 312 Pfam PF01882 Protein of unknown function DUF58 49 133 1.9E-20 T 26-04-2016 IPR002881 Domain of unknown function DUF58 PAM18_RS09725 6d79e086ec471816786f8d52afdd0511 312 PANTHER PTHR33608 5 312 6.7E-142 T 26-04-2016 PAM18_RS09725 6d79e086ec471816786f8d52afdd0511 312 PANTHER PTHR33608:SF6 5 312 6.7E-142 T 26-04-2016 PAM18_RS02110 74b1d3c5911b087b10beb25c2713bcfc 203 PANTHER PTHR30086 1 196 2.2E-113 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS02110 74b1d3c5911b087b10beb25c2713bcfc 203 Pfam PF01810 LysE type translocator 14 199 1.6E-51 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS02110 74b1d3c5911b087b10beb25c2713bcfc 203 PANTHER PTHR30086:SF10 1 196 2.2E-113 T 26-04-2016 PAM18_RS25325 8d20d5854ebe796d913e7f148d073b0a 263 SUPERFAMILY SSF53335 111 220 8.81E-10 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25325 8d20d5854ebe796d913e7f148d073b0a 263 Gene3D G3DSA:3.40.50.150 108 217 7.9E-8 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS25325 8d20d5854ebe796d913e7f148d073b0a 263 PANTHER PTHR32266 7 258 3.9E-58 T 26-04-2016 PAM18_RS25325 8d20d5854ebe796d913e7f148d073b0a 263 Pfam PF03059 Nicotianamine synthase protein 118 246 7.6E-12 T 26-04-2016 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 PAM18_RS15965 21dcecb93ff72b9dd1db70ed9e426689 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 14 101 2.9E-26 T 26-04-2016 IPR018676 Protein of unknown function DUF2149 PAM18_RS16185 aacce7d5416151b73860bba0205b1581 132 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 18.76 T 26-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 PAM18_RS16185 aacce7d5416151b73860bba0205b1581 132 PANTHER PTHR11058:SF5 10 125 6.4E-59 T 26-04-2016 PAM18_RS16185 aacce7d5416151b73860bba0205b1581 132 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 1.9E-29 T 26-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PAM18_RS16185 aacce7d5416151b73860bba0205b1581 132 PANTHER PTHR11058 10 125 6.4E-59 T 26-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 PAM18_RS00235 cd235fd9dbac79afccd746139bf7ff9e 228 Gene3D G3DSA:3.40.50.10070 49 133 2.0E-6 T 26-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PAM18_RS00235 cd235fd9dbac79afccd746139bf7ff9e 228 PANTHER PTHR41164 1 228 9.1E-84 T 26-04-2016 PAM18_RS00235 cd235fd9dbac79afccd746139bf7ff9e 228 Pfam PF03783 Curli production assembly/transport component CsgG 48 225 2.7E-30 T 26-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 PAM18_RS00235 cd235fd9dbac79afccd746139bf7ff9e 228 PANTHER PTHR41164:SF1 1 228 9.1E-84 T 26-04-2016 PAM18_RS00235 cd235fd9dbac79afccd746139bf7ff9e 228 SUPERFAMILY SSF52964 49 146 6.02E-10 T 26-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 PAM18_RS19050 8d4367c834c0ec4fde6a98f47a18a85e 252 Gene3D G3DSA:3.30.460.10 40 131 3.0E-19 T 26-04-2016 PAM18_RS19050 8d4367c834c0ec4fde6a98f47a18a85e 252 Pfam PF01909 Nucleotidyltransferase domain 40 78 2.2E-5 T 26-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PAM18_RS19050 8d4367c834c0ec4fde6a98f47a18a85e 252 SUPERFAMILY SSF81301 40 118 1.36E-11 T 26-04-2016 PAM18_RS16380 1ea776d5e7414e770ba0c5447ffe15f2 172 Gene3D G3DSA:2.130.10.10 48 120 2.1E-4 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 PAM18_RS26370 9b8519d1f281a0c7930888e75ed8f7bd 174 Pfam PF04351 Pilus assembly protein, PilP 26 170 1.7E-49 T 26-04-2016 IPR007446 Pilus assembly protein PilP PAM18_RS26370 9b8519d1f281a0c7930888e75ed8f7bd 174 PIRSF PIRSF016481 1 174 6.5E-75 T 26-04-2016 IPR007446 Pilus assembly protein PilP PAM18_RS08925 86c4218aa21e7b0df586681c56afae97 52 Pfam PF11752 Protein of unknown function (DUF3309) 4 52 3.4E-21 T 26-04-2016 IPR021738 Protein of unknown function DUF3309 PAM18_RS06035 50f9b45141fe090f1ae54922d3370156 203 PANTHER PTHR12992 5 191 2.7E-53 T 26-04-2016 PAM18_RS06035 50f9b45141fe090f1ae54922d3370156 203 SUPERFAMILY SSF55811 10 178 2.84E-32 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS06035 50f9b45141fe090f1ae54922d3370156 203 Gene3D G3DSA:3.90.79.10 7 186 4.1E-36 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 PAM18_RS06035 50f9b45141fe090f1ae54922d3370156 203 Pfam PF00293 NUDIX domain 28 136 5.6E-11 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 PAM18_RS16430 98c9e377505fd3b416e7d01502f92fad 165 PIRSF PIRSF030820 1 165 1.8E-67 T 26-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PAM18_RS16430 98c9e377505fd3b416e7d01502f92fad 165 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 161 5.6E-46 T 26-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PAM18_RS24030 c8345e1ca0dad9808f08ab02d6ffc6aa 125 SUPERFAMILY SSF141371 1 123 4.32E-39 T 26-04-2016 PAM18_RS24030 c8345e1ca0dad9808f08ab02d6ffc6aa 125 PIRSF PIRSF028141 4 123 1.9E-39 T 26-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type PAM18_RS24030 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Gene3D G3DSA:2.40.10.220 2 124 2.1E-48 T 26-04-2016 PAM18_RS24030 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Pfam PF07238 PilZ domain 7 103 2.7E-12 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS05020 505f08f1cbbc5d43d03d5d783e9da491 238 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 235 9.6E-67 T 26-04-2016 IPR018648 Protein of unknown function DUF2076 PAM18_RS01290 850aea4b35068623e4b20dd98a43f81a 268 Pfam PF11394 Protein of unknown function (DUF2875) 40 206 5.4E-31 T 26-04-2016 IPR021531 Protein of unknown function DUF2875 PAM18_RS17215 cedc92548bfc18e0f550eb13d4a3be2e 289 Gene3D G3DSA:2.120.10.30 153 249 8.9E-8 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS17215 cedc92548bfc18e0f550eb13d4a3be2e 289 Pfam PF03088 Strictosidine synthase 144 189 1.1E-4 T 26-04-2016 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 PAM18_RS17215 cedc92548bfc18e0f550eb13d4a3be2e 289 PANTHER PTHR10426 144 236 7.2E-14 T 26-04-2016 IPR004141 Strictosidine synthase GO:0009058|GO:0016844 PAM18_RS17215 cedc92548bfc18e0f550eb13d4a3be2e 289 SUPERFAMILY SSF101898 41 283 4.18E-18 T 26-04-2016 PAM18_RS17215 cedc92548bfc18e0f550eb13d4a3be2e 289 Gene3D G3DSA:2.120.10.30 54 152 1.8E-6 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS02190 dcd68d8eee4743750cb1ca712b6c67b6 144 Pfam PF11162 Protein of unknown function (DUF2946) 24 143 6.6E-9 T 26-04-2016 IPR021333 Protein of unknown function DUF2946 PAM18_RS19590 4fbcf690082afaae37baf0efa3cd7204 220 SUPERFAMILY SSF53335 8 220 5.19E-47 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19590 4fbcf690082afaae37baf0efa3cd7204 220 Gene3D G3DSA:3.40.50.150 5 220 2.8E-74 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS19590 4fbcf690082afaae37baf0efa3cd7204 220 PANTHER PTHR10509 1 220 2.2E-92 T 26-04-2016 PAM18_RS19590 4fbcf690082afaae37baf0efa3cd7204 220 PANTHER PTHR10509:SF14 1 220 2.2E-92 T 26-04-2016 PAM18_RS19590 4fbcf690082afaae37baf0efa3cd7204 220 Pfam PF01596 O-methyltransferase 22 219 1.2E-62 T 26-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 PANTHER PTHR10283:SF93 12 168 6.3E-261 T 26-04-2016 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 PANTHER PTHR10283:SF93 198 488 6.3E-261 T 26-04-2016 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 5 497 9.1E-228 T 26-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 PANTHER PTHR10283 12 168 6.3E-261 T 26-04-2016 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 PANTHER PTHR10283 198 488 6.3E-261 T 26-04-2016 PAM18_RS16515 3b2383b1e98132a85ca69accfbfd8845 500 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 500 320.973 T 26-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 PAM18_RS28970 b4438bc7555fc8c08b70be5882f3342e 207 Gene3D G3DSA:3.40.50.1000 93 198 2.4E-22 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS28970 b4438bc7555fc8c08b70be5882f3342e 207 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 16 197 8.5E-31 T 26-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PAM18_RS28970 b4438bc7555fc8c08b70be5882f3342e 207 SUPERFAMILY SSF56784 17 198 4.75E-16 T 26-04-2016 IPR023214 HAD-like domain PAM18_RS28970 b4438bc7555fc8c08b70be5882f3342e 207 Pfam PF12710 haloacid dehalogenase-like hydrolase 17 195 1.6E-25 T 26-04-2016 PAM18_RS28970 b4438bc7555fc8c08b70be5882f3342e 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 15 197 2.1E-39 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 PAM18_RS00495 4a83476bfce90ef10b30bca08c01bc6a 370 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 20 318 4.3E-93 T 26-04-2016 IPR018683 Domain of unknown function DUF2169 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 591 3.2E-219 T 26-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 Pfam PF01964 Radical SAM ThiC family 140 588 1.6E-200 T 26-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 593 56.332 T 26-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557:SF1 131 161 0.0 T 26-04-2016 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557:SF1 20 97 0.0 T 26-04-2016 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557:SF1 190 626 0.0 T 26-04-2016 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 Pfam PF13667 ThiC-associated domain 22 99 7.1E-34 T 26-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557 131 161 0.0 T 26-04-2016 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557 20 97 0.0 T 26-04-2016 PAM18_RS26020 695620f4c29ec77e265bb0f09f278c26 627 PANTHER PTHR30557 190 626 0.0 T 26-04-2016 PAM18_RS19495 bee49b0e6d65af5db53a3559fbcbab5a 204 SUPERFAMILY SSF53474 2 190 9.7E-24 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS19495 bee49b0e6d65af5db53a3559fbcbab5a 204 Pfam PF00975 Thioesterase domain 2 123 6.6E-9 T 26-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 PAM18_RS19495 bee49b0e6d65af5db53a3559fbcbab5a 204 Gene3D G3DSA:3.40.50.1820 2 170 1.6E-17 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS28180 3265a1d6597cb558962aad6ea714037d 140 PANTHER PTHR11803 27 135 1.1E-33 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS28180 3265a1d6597cb558962aad6ea714037d 140 SUPERFAMILY SSF55298 24 137 4.56E-32 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS28180 3265a1d6597cb558962aad6ea714037d 140 Pfam PF01042 Endoribonuclease L-PSP 26 133 6.4E-22 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS28180 3265a1d6597cb558962aad6ea714037d 140 Gene3D G3DSA:3.30.1330.40 5 136 3.3E-40 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.1E-155 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 277 530 1.6E-93 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 37 273 3.6E-82 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 PANTHER PTHR22855 1 535 0.0 T 26-04-2016 PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 PANTHER PTHR22855:SF35 1 535 0.0 T 26-04-2016 PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 23 270 2.99E-74 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS15540 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 237 517 5.97E-91 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS22615 65cf3c4c57745d153a9e9dad811dab16 102 Pfam PF13467 Ribbon-helix-helix domain 16 83 2.6E-24 T 26-04-2016 IPR027373 Ribbon-helix-helix domain PAM18_RS19975 b623f9b0f1e58ee6a6cffba1b42da199 190 Pfam PF13689 Domain of unknown function (DUF4154) 48 185 1.6E-32 T 26-04-2016 IPR025293 Protein of unknown function DUF4154 PAM18_RS23705 50dd1feac74d7a4e1ff89d1d31f22d64 81 Gene3D G3DSA:2.10.110.10 45 76 4.3E-4 T 26-04-2016 IPR001781 Zinc finger, LIM-type GO:0008270 PAM18_RS18930 a0d2f2ad99685fcf9090cd8689799a85 80 Gene3D G3DSA:1.10.260.40 17 51 1.9E-4 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS18930 a0d2f2ad99685fcf9090cd8689799a85 80 SUPERFAMILY SSF47413 17 58 9.78E-5 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 PAM18_RS09765 5d1b8a921f2028d4d4d4d8696d3d4833 329 Gene3D G3DSA:1.25.40.10 220 301 9.0E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS09765 5d1b8a921f2028d4d4d4d8696d3d4833 329 Gene3D G3DSA:1.25.10.10 128 184 2.6E-5 T 26-04-2016 IPR011989 Armadillo-like helical PAM18_RS10855 79180de09ce3731fcb434ffa0e1b8c7f 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 243 1.7E-46 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS10855 79180de09ce3731fcb434ffa0e1b8c7f 249 PANTHER PTHR30269 1 249 3.0E-72 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS10855 79180de09ce3731fcb434ffa0e1b8c7f 249 PANTHER PTHR30269:SF9 1 249 3.0E-72 T 26-04-2016 PAM18_RS15970 291f4b8ce1dbdcf731cb84d49242bc6a 158 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 138 1.7E-6 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS06860 7e14c5ca9fb8f448c9e96b45ad60e4f6 124 SUPERFAMILY SSF88659 59 115 2.43E-5 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PAM18_RS06860 7e14c5ca9fb8f448c9e96b45ad60e4f6 124 Gene3D G3DSA:1.10.10.10 53 114 7.1E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS15875 f1c15c935122296d21b9d1c9b202b9b6 332 PANTHER PTHR32196:SF35 27 331 1.8E-120 T 26-04-2016 PAM18_RS15875 f1c15c935122296d21b9d1c9b202b9b6 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 318 1.0E-47 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS15875 f1c15c935122296d21b9d1c9b202b9b6 332 PANTHER PTHR32196 27 331 1.8E-120 T 26-04-2016 PAM18_RS05140 0f2253651cc56a3c5aa4a9736319cb7f 56 Pfam PF10617 Protein of unknown function (DUF2474) 16 52 2.7E-18 T 26-04-2016 IPR018895 Protein of unknown function DUF2474 PAM18_RS18700 7ed8cebcfcf7e41723596c86378b2c76 58 PANTHER PTHR37531 1 58 1.9E-26 T 26-04-2016 PAM18_RS18700 7ed8cebcfcf7e41723596c86378b2c76 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 1.8E-17 T 26-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PAM18_RS18700 7ed8cebcfcf7e41723596c86378b2c76 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 8.7E-22 T 26-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PAM18_RS18700 7ed8cebcfcf7e41723596c86378b2c76 58 PANTHER PTHR37531:SF1 1 58 1.9E-26 T 26-04-2016 PAM18_RS16415 8b7aa5c71418c67a539e4241b00bd543 75 Pfam PF11174 Protein of unknown function (DUF2970) 15 70 4.1E-25 T 26-04-2016 IPR021344 Protein of unknown function DUF2970 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 Pfam PF07690 Major Facilitator Superfamily 18 362 2.0E-47 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 PANTHER PTHR23505 4 398 3.7E-84 T 26-04-2016 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 Gene3D G3DSA:1.20.1250.20 12 204 9.6E-37 T 26-04-2016 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 Gene3D G3DSA:1.20.1250.20 217 402 4.9E-24 T 26-04-2016 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 PANTHER PTHR23505:SF12 4 398 3.7E-84 T 26-04-2016 PAM18_RS04300 c602d810ca2ef164de538398cae81df4 419 SUPERFAMILY SSF103473 9 400 3.66E-74 T 26-04-2016 IPR020846 Major facilitator superfamily domain PAM18_RS24025 9f980f1efc36de66b5490c66a7dfd718 168 Pfam PF11220 Protein of unknown function (DUF3015) 24 163 3.6E-54 T 26-04-2016 IPR021383 Protein of unknown function DUF3015 PAM18_RS26465 f09067d5382d375a3e26883594114027 309 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 17 134 9.3E-44 T 26-04-2016 IPR008769 Poly granule associated PAM18_RS26465 f09067d5382d375a3e26883594114027 309 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 8 134 1.6E-45 T 26-04-2016 IPR008769 Poly granule associated PAM18_RS26465 f09067d5382d375a3e26883594114027 309 PANTHER PTHR38664:SF1 12 156 3.0E-19 T 26-04-2016 PAM18_RS26465 f09067d5382d375a3e26883594114027 309 PANTHER PTHR38664 12 156 3.0E-19 T 26-04-2016 PAM18_RS05535 309adfeec38d98bf02d8eb061c9ce23c 156 SUPERFAMILY SSF55961 1 152 2.27E-8 T 26-04-2016 PAM18_RS00225 457f80e9b660e6d7d9721429980057b7 417 PANTHER PTHR39084 1 417 1.8E-93 T 26-04-2016 PAM18_RS00225 457f80e9b660e6d7d9721429980057b7 417 Pfam PF02308 MgtC family 11 136 1.9E-18 T 26-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PAM18_RS00225 457f80e9b660e6d7d9721429980057b7 417 Pfam PF13194 Domain of unknown function (DUF4010) 184 392 1.9E-61 T 26-04-2016 IPR025105 Domain of unknown function DUF4010 PAM18_RS06895 34605f3a56926816d13a9fbe53961614 160 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 45 157 1.2E-27 T 26-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family PAM18_RS06895 34605f3a56926816d13a9fbe53961614 160 Pfam PF05119 Phage terminase, small subunit 54 144 1.4E-23 T 26-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family PAM18_RS04455 058fe8b409e6fdc59136785a169493cc 172 Pfam PF11736 Protein of unknown function (DUF3299) 28 167 9.7E-48 T 26-04-2016 IPR021727 Protein of unknown function DUF3299 PAM18_RS24800 b7ccbfbfb60333acb3cc61bb9a8e1a26 97 Pfam PF11006 Protein of unknown function (DUF2845) 23 94 5.6E-18 T 26-04-2016 IPR021268 Protein of unknown function DUF2845 PAM18_RS20815 d40667151868dd96623c0c5c1d834ac0 69 Gene3D G3DSA:1.20.5.300 2 49 6.9E-18 T 26-04-2016 PAM18_RS20815 d40667151868dd96623c0c5c1d834ac0 69 PANTHER PTHR36508 1 69 2.5E-26 T 26-04-2016 PAM18_RS20815 d40667151868dd96623c0c5c1d834ac0 69 Hamap MF_00715 Protein SlyX [slyX]. 2 69 17.239 T 26-04-2016 IPR007236 SlyX PAM18_RS20815 d40667151868dd96623c0c5c1d834ac0 69 Pfam PF04102 SlyX 3 69 4.8E-24 T 26-04-2016 IPR007236 SlyX PAM18_RS08820 136bae3326b77687cabfbf4e132820e9 279 PANTHER PTHR30193 1 279 4.2E-86 T 26-04-2016 PAM18_RS08820 136bae3326b77687cabfbf4e132820e9 279 Gene3D G3DSA:1.10.3720.10 8 274 1.6E-38 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08820 136bae3326b77687cabfbf4e132820e9 279 PANTHER PTHR30193:SF20 1 279 4.2E-86 T 26-04-2016 PAM18_RS08820 136bae3326b77687cabfbf4e132820e9 279 SUPERFAMILY SSF161098 7 275 8.11E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS08820 136bae3326b77687cabfbf4e132820e9 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 270 5.5E-12 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS21400 7563c8d855eb1e22fa585678ccacf455 139 Gene3D G3DSA:1.20.120.550 12 100 4.4E-4 T 26-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PAM18_RS21400 7563c8d855eb1e22fa585678ccacf455 139 Pfam PF01124 MAPEG family 6 136 1.6E-21 T 26-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PAM18_RS21400 7563c8d855eb1e22fa585678ccacf455 139 SUPERFAMILY SSF161084 11 136 8.37E-17 T 26-04-2016 PAM18_RS27455 221e900e26040134f33aae0e34ca02df 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 4 113 7.5E-30 T 26-04-2016 IPR012659 Conserved hypothetical protein CHP02444 PAM18_RS27455 221e900e26040134f33aae0e34ca02df 159 Pfam PF09523 Protein of unknown function (DUF2390) 5 110 2.2E-32 T 26-04-2016 IPR012659 Conserved hypothetical protein CHP02444 PAM18_RS13740 526fd90d497d558627e0c634eb310bff 338 PANTHER PTHR35564:SF2 2 327 1.6E-142 T 26-04-2016 PAM18_RS13740 526fd90d497d558627e0c634eb310bff 338 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 317 2.0E-82 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS13740 526fd90d497d558627e0c634eb310bff 338 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 20 317 1.7E-73 T 26-04-2016 IPR010732 Type VI secretion, TssG-like PAM18_RS13740 526fd90d497d558627e0c634eb310bff 338 PANTHER PTHR35564 2 327 1.6E-142 T 26-04-2016 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 Gene3D G3DSA:3.40.50.1820 3 268 2.8E-52 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 SUPERFAMILY SSF53474 3 267 9.4E-55 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 TIGRFAM TIGR02240 PHA_depoly_arom: poly(3-hydroxyalkanoate) depolymerase 4 279 7.2E-192 T 26-04-2016 IPR011942 Poly(3-hydroxyalkanoate) depolymerase KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.9E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.9E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.9E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.9E-16 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 PANTHER PTHR10992 8 268 5.4E-39 T 26-04-2016 PAM18_RS26450 0dd70ae705fbbd14789ba267ebeb9280 285 Pfam PF00561 alpha/beta hydrolase fold 30 251 1.4E-28 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 PANTHER PTHR35936:SF4 35 285 9.1E-143 T 26-04-2016 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 PANTHER PTHR35936 35 285 9.1E-143 T 26-04-2016 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 Gene3D G3DSA:3.40.190.10 65 149 6.1E-9 T 26-04-2016 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 Gene3D G3DSA:3.40.190.10 247 286 6.1E-9 T 26-04-2016 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 285 2.5E-15 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 SUPERFAMILY SSF53850 64 285 3.48E-31 T 26-04-2016 PAM18_RS27545 cd2957f49a61f5ed47cd774e840ae403 293 Gene3D G3DSA:3.40.190.10 158 233 8.6E-4 T 26-04-2016 PAM18_RS05165 973766db0196cd7742e214155540aac6 641 Pfam PF06980 Protein of unknown function (DUF1302) 31 641 1.8E-230 T 26-04-2016 IPR010727 Protein of unknown function DUF1302 PAM18_RS22725 bc041925e64782c46395b51eb55048b9 80 Pfam PF09012 FeoC like transcriptional regulator 3 67 6.2E-14 T 26-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC PAM18_RS22725 bc041925e64782c46395b51eb55048b9 80 SUPERFAMILY SSF46785 1 71 1.02E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS11840 22cb7ce7ea13055bf1d3bebd569c7125 194 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 88 175 4.9E-6 T 26-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 PAM18_RS29005 d601a2db832c4624c0711a71ffaaf0ee 296 Gene3D G3DSA:2.60.120.330 110 255 2.1E-23 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS29005 d601a2db832c4624c0711a71ffaaf0ee 296 PANTHER PTHR10209 114 254 1.7E-14 T 26-04-2016 PAM18_RS29005 d601a2db832c4624c0711a71ffaaf0ee 296 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 159 249 3.5E-9 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS29005 d601a2db832c4624c0711a71ffaaf0ee 296 SUPERFAMILY SSF51197 34 255 3.64E-23 T 26-04-2016 PAM18_RS23210 1235af6bf18ff42ee039e8796b3fa915 102 SUPERFAMILY SSF52091 7 100 1.79E-16 T 26-04-2016 IPR002645 STAS domain PAM18_RS23210 1235af6bf18ff42ee039e8796b3fa915 102 Gene3D G3DSA:3.30.750.24 11 100 4.0E-16 T 26-04-2016 IPR002645 STAS domain PAM18_RS23210 1235af6bf18ff42ee039e8796b3fa915 102 Pfam PF13466 STAS domain 14 94 2.6E-16 T 26-04-2016 IPR002645 STAS domain PAM18_RS18285 91d354c7a8b01613882738a161bb597d 207 SUPERFAMILY SSF53335 16 203 2.26E-36 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS18285 91d354c7a8b01613882738a161bb597d 207 Pfam PF13489 Methyltransferase domain 32 179 1.1E-14 T 26-04-2016 PAM18_RS18285 91d354c7a8b01613882738a161bb597d 207 PANTHER PTHR10108 1 199 2.1E-18 T 26-04-2016 PAM18_RS18285 91d354c7a8b01613882738a161bb597d 207 Gene3D G3DSA:3.40.50.150 32 194 3.5E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS16385 5f41706b0f4003bdaa2df448e3a86bb0 154 Gene3D G3DSA:3.90.1720.10 8 98 2.8E-7 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS16385 5f41706b0f4003bdaa2df448e3a86bb0 154 SUPERFAMILY SSF54001 7 100 2.99E-6 T 26-04-2016 PAM18_RS25240 39f47f6667bb8a6d727e35373bf7e84d 120 Pfam PF04138 GtrA-like protein 5 119 2.2E-22 T 26-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PAM18_RS11885 07e27531dd961c048d1e6b8752656f51 297 SUPERFAMILY SSF53474 88 232 1.2E-7 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS11885 07e27531dd961c048d1e6b8752656f51 297 Gene3D G3DSA:3.40.50.1820 75 269 5.2E-4 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17615 98c8393825506dc495d9f23416708f3c 171 Gene3D G3DSA:3.10.129.10 3 166 5.3E-60 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17615 98c8393825506dc495d9f23416708f3c 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.643 T 26-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS17615 98c8393825506dc495d9f23416708f3c 171 SUPERFAMILY SSF54637 2 168 4.97E-58 T 26-04-2016 IPR029069 HotDog domain PAM18_RS17615 98c8393825506dc495d9f23416708f3c 171 Pfam PF07977 FabA-like domain 28 158 1.3E-52 T 26-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 PAM18_RS17615 98c8393825506dc495d9f23416708f3c 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 4.6E-98 T 26-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 PAM18_RS26295 5e55a99b91e49f90864fa090b336f7e4 150 SUPERFAMILY SSF54637 11 145 6.66E-27 T 26-04-2016 IPR029069 HotDog domain PAM18_RS26295 5e55a99b91e49f90864fa090b336f7e4 150 Gene3D G3DSA:3.10.129.10 2 148 4.9E-43 T 26-04-2016 IPR029069 HotDog domain PAM18_RS26295 5e55a99b91e49f90864fa090b336f7e4 150 Pfam PF14539 Domain of unknown function (DUF4442) 13 138 1.2E-19 T 26-04-2016 IPR027961 Protein of unknown function DUF4442 PAM18_RS07935 9be0442d7190755219c6c50b6df4dc81 456 Gene3D G3DSA:2.50.20.10 343 451 1.1E-34 T 26-04-2016 PAM18_RS07935 9be0442d7190755219c6c50b6df4dc81 456 Gene3D G3DSA:2.50.20.10 162 310 1.1E-34 T 26-04-2016 PAM18_RS07935 9be0442d7190755219c6c50b6df4dc81 456 Pfam PF07044 Protein of unknown function (DUF1329) 84 451 1.1E-153 T 26-04-2016 IPR010752 Protein of unknown function DUF1329 PAM18_RS07885 46c3ddddc020682b1d4d6615aaa341ba 228 Pfam PF04172 LrgB-like family 14 226 2.1E-70 T 26-04-2016 IPR007300 CidB/LrgB family PAM18_RS07885 46c3ddddc020682b1d4d6615aaa341ba 228 PANTHER PTHR30249:SF4 1 226 1.9E-128 T 26-04-2016 PAM18_RS07885 46c3ddddc020682b1d4d6615aaa341ba 228 PANTHER PTHR30249 1 226 1.9E-128 T 26-04-2016 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 580 590 3.2E-19 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 693 707 3.2E-19 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 569 3.2E-19 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 670 688 3.2E-19 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 459 3.2E-19 T 26-04-2016 IPR001775 GspD/PilQ family PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 651 684 - T 26-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 Pfam PF00263 Bacterial type II and III secretion system protein 549 705 2.2E-49 T 26-04-2016 IPR004846 Type II/III secretion system GO:0009306 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 Pfam PF03958 Bacterial type II/III secretion system short domain 381 449 2.4E-15 T 26-04-2016 IPR005644 NolW-like PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 PANTHER PTHR30604 1 714 1.9E-138 T 26-04-2016 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 Pfam PF07660 Secretin and TonB N terminus short domain 307 353 1.5E-8 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 281 706 2.0E-161 T 26-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 Pfam PF11741 AMIN domain 38 121 7.9E-7 T 26-04-2016 IPR021731 AMIN domain PAM18_RS26365 61959ae8882cc31c2fd68ac996e7ddc7 714 SMART SM00965 306 354 1.4E-10 T 26-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Gene3D G3DSA:3.20.20.60 303 392 1.1E-135 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Gene3D G3DSA:3.20.20.60 429 513 1.1E-135 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Gene3D G3DSA:3.20.20.60 3 270 1.1E-135 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 SUPERFAMILY SSF51621 429 514 2.42E-124 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 SUPERFAMILY SSF51621 10 392 2.42E-124 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 PANTHER PTHR21631 96 144 1.3E-77 T 26-04-2016 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 PANTHER PTHR21631 168 266 1.3E-77 T 26-04-2016 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 PANTHER PTHR21631 446 531 1.3E-77 T 26-04-2016 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 PANTHER PTHR21631 317 409 1.3E-77 T 26-04-2016 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 81 269 3.2E-20 T 26-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 330 399 1.2E-9 T 26-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PAM18_RS12025 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 429 530 2.5E-13 T 26-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 PAM18_RS20630 e0e937e41e14aec901568ae53f88a943 357 Pfam PF01594 Domain of unknown function DUF20 20 345 3.1E-72 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS20630 e0e937e41e14aec901568ae53f88a943 357 PANTHER PTHR21716:SF19 6 357 7.8E-158 T 26-04-2016 PAM18_RS20630 e0e937e41e14aec901568ae53f88a943 357 PANTHER PTHR21716 6 357 7.8E-158 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like PAM18_RS20610 6a1a6553f05a7de6fbefbe7e53c5fc1b 396 Pfam PF06804 NlpB/DapX lipoprotein 36 375 1.5E-24 T 26-04-2016 IPR010653 NlpB/DapX lipoprotein PAM18_RS03905 4d74478fcc12d5af144e1fe3e56f5052 132 PANTHER PTHR11803 1 130 4.9E-71 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS03905 4d74478fcc12d5af144e1fe3e56f5052 132 Gene3D G3DSA:3.30.1330.40 11 130 1.9E-39 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS03905 4d74478fcc12d5af144e1fe3e56f5052 132 PANTHER PTHR11803:SF6 1 130 4.9E-71 T 26-04-2016 PAM18_RS03905 4d74478fcc12d5af144e1fe3e56f5052 132 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.1E-25 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family PAM18_RS03905 4d74478fcc12d5af144e1fe3e56f5052 132 SUPERFAMILY SSF55298 9 130 1.4E-35 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAM18_RS23870 d17292f615b53c88f678b6f0b0892cd5 162 Pfam PF11220 Protein of unknown function (DUF3015) 19 158 4.6E-56 T 26-04-2016 IPR021383 Protein of unknown function DUF3015 PAM18_RS21900 7b51b2ee3b7b65916018c9e45e39b681 273 PANTHER PTHR35788 1 273 7.0E-195 T 26-04-2016 PAM18_RS21900 7b51b2ee3b7b65916018c9e45e39b681 273 PANTHER PTHR35788:SF2 1 273 7.0E-195 T 26-04-2016 PAM18_RS21900 7b51b2ee3b7b65916018c9e45e39b681 273 Pfam PF04294 VanW like protein 70 203 1.9E-33 T 26-04-2016 IPR007391 Vancomycin resistance VanW PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 PANTHER PTHR12715:SF12 11 286 1.3E-56 T 26-04-2016 PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 SUPERFAMILY SSF103481 44 143 1.1E-9 T 26-04-2016 PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 SUPERFAMILY SSF103481 194 285 9.68E-13 T 26-04-2016 PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 PANTHER PTHR12715 11 286 1.3E-56 T 26-04-2016 PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 Pfam PF00892 EamA-like transporter family 153 283 3.7E-11 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS11620 14aa81d75435db373fa1ecedf73e01e7 287 Pfam PF00892 EamA-like transporter family 17 140 1.2E-9 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS04150 7ad0fd59df6317af2474c72fde7315db 307 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 280 1.8E-85 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS04150 7ad0fd59df6317af2474c72fde7315db 307 SUPERFAMILY SSF53213 12 280 5.1E-50 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS04150 7ad0fd59df6317af2474c72fde7315db 307 Gene3D G3DSA:3.40.830.10 5 268 1.6E-24 T 26-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 PAM18_RS04150 7ad0fd59df6317af2474c72fde7315db 307 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 282 1.7E-138 T 26-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 PAM18_RS22020 7aa6ea53ac6f6b01010e532762579c93 430 ProDom PD140749 ORF PHAGE PA0727 1 429 0.0 T 26-04-2016 PAM18_RS16115 9436461e40ce5a991af281035c88775f 255 Pfam PF04116 Fatty acid hydroxylase superfamily 76 206 1.5E-28 T 26-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PAM18_RS16115 9436461e40ce5a991af281035c88775f 255 PANTHER PTHR11863 49 217 9.7E-29 T 26-04-2016 PAM18_RS16115 9436461e40ce5a991af281035c88775f 255 PANTHER PTHR11863 1 14 9.7E-29 T 26-04-2016 PAM18_RS16115 9436461e40ce5a991af281035c88775f 255 PANTHER PTHR11863:SF2 49 217 9.7E-29 T 26-04-2016 PAM18_RS16115 9436461e40ce5a991af281035c88775f 255 PANTHER PTHR11863:SF2 1 14 9.7E-29 T 26-04-2016 PAM18_RS21340 4b263f9a59f92b1f77f2cf09d9f0466c 260 Gene3D G3DSA:1.20.910.10 18 249 2.4E-52 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS21340 4b263f9a59f92b1f77f2cf09d9f0466c 260 SUPERFAMILY SSF48613 19 243 5.44E-45 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS21340 4b263f9a59f92b1f77f2cf09d9f0466c 260 Pfam PF14518 Iron-containing redox enzyme 56 232 5.4E-14 T 26-04-2016 IPR028201 PqqC-like protein PAM18_RS14480 6c2dc243e0dfb6515a0395da3881dda3 331 PIRSF PIRSF033905 1 331 1.6E-171 T 26-04-2016 IPR009645 Uncharacterised conserved protein GguC PAM18_RS14480 6c2dc243e0dfb6515a0395da3881dda3 331 Gene3D G3DSA:3.90.850.10 134 310 2.2E-4 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS14480 6c2dc243e0dfb6515a0395da3881dda3 331 SUPERFAMILY SSF56529 112 316 9.01E-25 T 26-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 399 9.2E-44 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 PANTHER PTHR30097:SF4 5 484 7.3E-212 T 26-04-2016 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.50.100 294 325 2.3E-10 T 26-04-2016 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.50.100 185 218 2.3E-10 T 26-04-2016 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 PANTHER PTHR30097 5 484 7.3E-212 T 26-04-2016 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 SUPERFAMILY SSF111369 181 404 1.7E-22 T 26-04-2016 PAM18_RS12980 3f60db454586883fe5615237b69c4ee8 484 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 162 471 4.2E-44 T 26-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 PAM18_RS11570 dbd8dc7a5bc0c9090d036f5e7ff436d9 130 Gene3D G3DSA:3.90.1590.10 2 120 2.4E-33 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS11570 dbd8dc7a5bc0c9090d036f5e7ff436d9 130 PANTHER PTHR33337:SF10 1 116 5.8E-46 T 26-04-2016 PAM18_RS11570 dbd8dc7a5bc0c9090d036f5e7ff436d9 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 1.7E-17 T 26-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 PAM18_RS11570 dbd8dc7a5bc0c9090d036f5e7ff436d9 130 PANTHER PTHR33337 1 116 5.8E-46 T 26-04-2016 PAM18_RS11570 dbd8dc7a5bc0c9090d036f5e7ff436d9 130 SUPERFAMILY SSF51316 3 123 2.93E-36 T 26-04-2016 IPR011057 Mss4-like PAM18_RS10555 2bb6b7a3b5abb5043e0856181e6c4a10 208 Gene3D G3DSA:3.40.50.10230 1 204 1.0E-81 T 26-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PAM18_RS10555 2bb6b7a3b5abb5043e0856181e6c4a10 208 SUPERFAMILY SSF63965 1 205 3.14E-74 T 26-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PAM18_RS10555 2bb6b7a3b5abb5043e0856181e6c4a10 208 PANTHER PTHR32439 2 203 7.6E-76 T 26-04-2016 PAM18_RS10555 2bb6b7a3b5abb5043e0856181e6c4a10 208 Pfam PF02570 Precorrin-8X methylmutase 11 205 5.2E-73 T 26-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 PAM18_RS15285 63e9a6b22e2651744c96c6e983fc614a 351 Pfam PF05275 Copper resistance protein B precursor (CopB) 147 351 1.1E-92 T 26-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PAM18_RS28530 585e03e8bccfd8e8df15570741962d40 70 Pfam PF06568 Domain of unknown function (DUF1127) 25 60 1.1E-11 T 26-04-2016 IPR009506 Protein of unknown function DUF1127 PAM18_RS12875 8fa69d05df3ebc9ba693d70f3053eca9 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 96 2.0E-10 T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PAM18_RS17590 79ecd4a80c29b2a6a5c46ab7477fdd65 113 Pfam PF14333 Domain of unknown function (DUF4389) 8 83 2.5E-29 T 26-04-2016 IPR025498 Protein of unknown function DUF4389 PAM18_RS08650 a10c6d78c5f7b9b678705d618cc08232 244 Pfam PF09836 Putative DNA-binding domain 6 90 3.2E-28 T 26-04-2016 IPR018640 Putative DNA-binding domain, bacteria PAM18_RS02070 d96f290186cd04b6121a312428ab3a72 121 PANTHER PTHR26402 2 121 2.3E-42 T 26-04-2016 PAM18_RS02070 d96f290186cd04b6121a312428ab3a72 121 Pfam PF00072 Response regulator receiver domain 4 116 3.7E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02070 d96f290186cd04b6121a312428ab3a72 121 SMART SM00448 2 115 3.4E-39 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 PAM18_RS02070 d96f290186cd04b6121a312428ab3a72 121 Gene3D G3DSA:3.40.50.2300 1 120 1.2E-39 T 26-04-2016 PAM18_RS02070 d96f290186cd04b6121a312428ab3a72 121 SUPERFAMILY SSF52172 1 120 9.53E-39 T 26-04-2016 IPR011006 CheY-like superfamily PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PANTHER PTHR22773:SF49 1 493 1.2E-160 T 26-04-2016 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 Pfam PF00361 Proton-conducting membrane transporter 124 417 8.7E-41 T 26-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 1.2E-11 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 1.2E-11 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 1.2E-11 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 1.2E-11 T 26-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PAM18_RS20365 69558840d65bcc33facffb5e67008a4e 499 PANTHER PTHR22773 1 493 1.2E-160 T 26-04-2016 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 26-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 PANTHER PTHR13707 2 218 5.5E-113 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 Pfam PF01144 Coenzyme A transferase 6 201 1.8E-41 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 SUPERFAMILY SSF100950 4 216 3.27E-74 T 26-04-2016 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 SMART SM00882 6 202 5.8E-72 T 26-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.1E-98 T 26-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 PAM18_RS15610 0b98d5de4aca98813e101f57334311d2 218 Gene3D G3DSA:3.40.810.20 4 213 4.7E-89 T 26-04-2016 PAM18_RS15640 7cce59c82c8c0c2704be6ff5a47443e3 187 SUPERFAMILY SSF159275 5 187 6.28E-57 T 26-04-2016 PAM18_RS15640 7cce59c82c8c0c2704be6ff5a47443e3 187 Pfam PF06475 Putative glycolipid-binding 17 186 4.9E-55 T 26-04-2016 IPR009467 Putative glycolipid-binding protein PAM18_RS26775 72cc2a6ddd034686cb74b1c8abe5a443 190 Pfam PF13511 Domain of unknown function (DUF4124) 8 57 6.3E-15 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS13270 2439638923458c82a2c59fb1873e4417 307 SUPERFAMILY SSF82171 39 273 8.37E-8 T 26-04-2016 PAM18_RS13270 2439638923458c82a2c59fb1873e4417 307 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 221 245 7.5E-5 T 26-04-2016 IPR006530 YD repeat PAM18_RS13270 2439638923458c82a2c59fb1873e4417 307 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 283 306 1.4E-4 T 26-04-2016 IPR006530 YD repeat PAM18_RS13270 2439638923458c82a2c59fb1873e4417 307 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 88 120 0.0024 T 26-04-2016 IPR006530 YD repeat PAM18_RS13270 2439638923458c82a2c59fb1873e4417 307 Pfam PF05593 RHS Repeat 226 262 3.5E-8 T 26-04-2016 IPR031325 RHS repeat PAM18_RS01985 5628a0e25cd02ffdbac3e72b75ce7565 197 PANTHER PTHR33219:SF5 9 196 1.4E-80 T 26-04-2016 PAM18_RS01985 5628a0e25cd02ffdbac3e72b75ce7565 197 PANTHER PTHR33219 9 196 1.4E-80 T 26-04-2016 PAM18_RS01985 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 14 83 1.7E-19 T 26-04-2016 IPR003425 CCB3/YggT GO:0016020 PAM18_RS01985 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 110 179 9.5E-21 T 26-04-2016 IPR003425 CCB3/YggT GO:0016020 PAM18_RS19440 a798d52ca1ce288cab75ef45eaffc6b9 62 Pfam PF07869 Protein of unknown function (DUF1656) 4 56 2.7E-11 T 26-04-2016 IPR012451 Protein of unknown function DUF1656 PAM18_RS04000 cad7219e7a641ef9da46dadcb49fec4e 222 SMART SM00287 41 104 6.4E-7 T 26-04-2016 IPR003646 SH3-like domain, bacterial-type PAM18_RS04000 cad7219e7a641ef9da46dadcb49fec4e 222 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 45 221 1.7E-42 T 26-04-2016 IPR016476 SH3 domain protein PAM18_RS04000 cad7219e7a641ef9da46dadcb49fec4e 222 Pfam PF08239 Bacterial SH3 domain 53 101 2.4E-10 T 26-04-2016 IPR003646 SH3-like domain, bacterial-type PAM18_RS04000 cad7219e7a641ef9da46dadcb49fec4e 222 PIRSF PIRSF006158 15 222 9.7E-75 T 26-04-2016 IPR016476 SH3 domain protein PAM18_RS11890 1b19fc00d678e05996e05d6dd45ad10e 360 SUPERFAMILY SSF52151 160 323 1.41E-15 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS11890 1b19fc00d678e05996e05d6dd45ad10e 360 SUPERFAMILY SSF52151 48 106 1.41E-15 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 PAM18_RS02335 ed73d0b533e0176c99c5b09d49d10b51 169 SUPERFAMILY SSF50630 22 163 4.12E-40 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS02335 ed73d0b533e0176c99c5b09d49d10b51 169 PANTHER PTHR38037 1 169 7.9E-58 T 26-04-2016 PAM18_RS02335 ed73d0b533e0176c99c5b09d49d10b51 169 Pfam PF05618 Putative ATP-dependant zinc protease 23 166 1.8E-54 T 26-04-2016 PAM18_RS02335 ed73d0b533e0176c99c5b09d49d10b51 169 Gene3D G3DSA:2.40.70.10 21 157 8.0E-44 T 26-04-2016 IPR021109 Aspartic peptidase domain PAM18_RS07545 3609310dd6bca434afd108c2233c23fe 64 SUPERFAMILY SSF55008 2 61 1.57E-13 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS07545 3609310dd6bca434afd108c2233c23fe 64 Pfam PF00403 Heavy-metal-associated domain 4 60 3.9E-9 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PAM18_RS07545 3609310dd6bca434afd108c2233c23fe 64 Gene3D G3DSA:3.30.70.100 2 61 5.6E-16 T 26-04-2016 PAM18_RS29000 c9faaded5439b67aaa9d4d5f68986cd6 315 SUPERFAMILY SSF51197 110 286 8.24E-19 T 26-04-2016 PAM18_RS29000 c9faaded5439b67aaa9d4d5f68986cd6 315 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 191 275 3.1E-5 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS29000 c9faaded5439b67aaa9d4d5f68986cd6 315 Gene3D G3DSA:2.60.120.330 133 309 1.4E-15 T 26-04-2016 IPR027443 Isopenicillin N synthase-like PAM18_RS23425 a1850f55ea833a93d3e8d7c38be761f1 236 Pfam PF04402 Protein of unknown function (DUF541) 31 227 1.6E-26 T 26-04-2016 IPR007497 Protein of unknown function DUF541 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 SUPERFAMILY SSF51679 14 350 8.51E-79 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 PANTHER PTHR30011 1 354 2.7E-187 T 26-04-2016 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 PANTHER PTHR30011:SF29 1 354 2.7E-187 T 26-04-2016 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 Gene3D G3DSA:3.20.20.30 12 252 9.5E-89 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 Gene3D G3DSA:3.20.20.30 284 350 9.5E-89 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS12200 9bc42db7c9a870689ba69b95f259fc97 362 Pfam PF00296 Luciferase-like monooxygenase 21 324 1.9E-75 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PAM18_RS06105 ede49dc63b214523104994bdc0a3820c 226 PANTHER PTHR30258 1 102 3.4E-22 T 26-04-2016 PAM18_RS06105 ede49dc63b214523104994bdc0a3820c 226 SUPERFAMILY SSF160246 3 66 1.52E-13 T 26-04-2016 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 141 174 5.2E-4 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 37 70 0.003 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 71 104 42.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13414 TPR repeat 47 82 8.2E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13424 Tetratricopeptide repeat 105 172 1.5E-8 T 26-04-2016 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 38 242 2.8E-30 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 SUPERFAMILY SSF48452 38 203 1.37E-24 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 4.7E-74 T 26-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW PAM18_RS05750 69dc5b9e5d5d9255d51f639eecef8626 252 PANTHER PTHR23083 38 251 4.0E-26 T 26-04-2016 PAM18_RS12535 3e8cefcf61d6e92dd001a56aa1026e89 114 Pfam PF07867 Protein of unknown function (DUF1654) 19 84 2.7E-17 T 26-04-2016 IPR012449 Bacteriophage F116, Orf28 PAM18_RS02200 faec22c989ff7d89fb92962dde19776e 492 Pfam PF03929 PepSY-associated TM region 8 277 1.5E-11 T 26-04-2016 IPR005625 PepSY-associated TM protein PAM18_RS06910 900e8546ac3ff850ef1ef6f10f8ee406 217 Pfam PF04586 Caudovirus prohead serine protease 13 157 5.5E-36 T 26-04-2016 IPR006433 Prohead protease PAM18_RS06910 900e8546ac3ff850ef1ef6f10f8ee406 217 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 20 158 3.1E-46 T 26-04-2016 IPR006433 Prohead protease PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 PANTHER PTHR19328 45 100 1.4E-194 T 26-04-2016 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 PANTHER PTHR19328 130 437 1.4E-194 T 26-04-2016 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 Gene3D G3DSA:2.120.10.30 64 436 1.2E-61 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 PANTHER PTHR19328:SF26 45 100 1.4E-194 T 26-04-2016 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 PANTHER PTHR19328:SF26 130 437 1.4E-194 T 26-04-2016 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 SUPERFAMILY SSF50952 126 437 3.79E-33 T 26-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 SUPERFAMILY SSF50952 65 97 3.79E-33 T 26-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PAM18_RS13520 5ba1742bb4ae7eeaf6564fee1b002612 439 Pfam PF07995 Glucose / Sorbosone dehydrogenase 80 360 4.0E-14 T 26-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 PAM18_RS01630 c3fd342e3ea3cb2f9ffc4d3c98a8f7b5 309 PANTHER PTHR30193 1 304 3.4E-132 T 26-04-2016 PAM18_RS01630 c3fd342e3ea3cb2f9ffc4d3c98a8f7b5 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 297 2.0E-18 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01630 c3fd342e3ea3cb2f9ffc4d3c98a8f7b5 309 PANTHER PTHR30193:SF10 1 304 3.4E-132 T 26-04-2016 PAM18_RS01630 c3fd342e3ea3cb2f9ffc4d3c98a8f7b5 309 Gene3D G3DSA:1.10.3720.10 14 297 1.8E-50 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS01630 c3fd342e3ea3cb2f9ffc4d3c98a8f7b5 309 SUPERFAMILY SSF161098 19 300 4.95E-55 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PAM18_RS22625 51ccafb6b8b97c20e4a9655e7421db84 203 Pfam PF11008 Protein of unknown function (DUF2846) 15 146 1.0E-33 T 26-04-2016 IPR022548 Domain of unknown function DUF2846 PAM18_RS21070 fde3e8fca9b0e179e6ac49eefeab3d4c 171 Pfam PF13511 Domain of unknown function (DUF4124) 8 55 5.5E-10 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS11370 ba0b109136fc137d690fceb46fb7ffd2 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 4.0E-29 T 26-04-2016 IPR021250 Protein of unknown function DUF2789 PAM18_RS20905 7ea2e835001b53ad3c722ecda69067cf 238 Pfam PF11306 Protein of unknown function (DUF3108) 22 219 6.2E-20 T 26-04-2016 IPR021457 Protein of unknown function DUF3108 PAM18_RS17260 d255508340ea620b5befaab33e575a14 327 Pfam PF12146 Serine aminopeptidase, S33 83 170 5.5E-10 T 26-04-2016 IPR022742 Serine aminopeptidase, S33 PAM18_RS17260 d255508340ea620b5befaab33e575a14 327 PANTHER PTHR10992 74 282 1.9E-16 T 26-04-2016 PAM18_RS17260 d255508340ea620b5befaab33e575a14 327 SUPERFAMILY SSF53474 237 296 1.16E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17260 d255508340ea620b5befaab33e575a14 327 SUPERFAMILY SSF53474 29 176 1.16E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS17260 d255508340ea620b5befaab33e575a14 327 Gene3D G3DSA:3.40.50.1820 39 284 1.5E-33 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Pfam PF01476 LysM domain 31 76 2.5E-12 T 26-04-2016 IPR018392 LysM domain PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Gene3D G3DSA:3.10.350.10 30 77 3.5E-7 T 26-04-2016 IPR018392 LysM domain PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SMART SM00257 30 78 0.0023 T 26-04-2016 IPR018392 LysM domain PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 PANTHER PTHR34700 4 340 6.3E-116 T 26-04-2016 PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SUPERFAMILY SSF54106 30 77 3.4E-7 T 26-04-2016 IPR018392 LysM domain PAM18_RS00100 e0adbf0c836c3cd09f6fb730e80ecdfb 341 PANTHER PTHR34700:SF2 4 340 6.3E-116 T 26-04-2016 PAM18_RS09300 49b2fa5f304fa06b97abbe898ef38493 474 Pfam PF13440 Polysaccharide biosynthesis protein 26 319 3.8E-25 T 26-04-2016 PAM18_RS09300 49b2fa5f304fa06b97abbe898ef38493 474 PANTHER PTHR30250 1 459 6.7E-26 T 26-04-2016 PAM18_RS09300 49b2fa5f304fa06b97abbe898ef38493 474 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 460 6.8E-16 T 26-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PAM18_RS04180 e0dee72019f52b7813f5d751f772c6cc 189 Gene3D G3DSA:3.90.226.10 70 119 3.8E-4 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS04180 e0dee72019f52b7813f5d751f772c6cc 189 SUPERFAMILY SSF52096 34 186 1.79E-10 T 26-04-2016 IPR029045 ClpP/crotonase-like domain PAM18_RS21985 f3004b89b202be8ad07daadbb24a65fd 70 Pfam PF14375 Cysteine-rich CWC 10 62 1.4E-14 T 26-04-2016 IPR032720 Cysteine-rich CWC PAM18_RS18915 167c1125657c9f81e7e3b0edc238c870 237 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 74 181 1.5E-17 T 26-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted PAM18_RS18915 167c1125657c9f81e7e3b0edc238c870 237 PANTHER PTHR39327 1 237 3.1E-117 T 26-04-2016 PAM18_RS18915 167c1125657c9f81e7e3b0edc238c870 237 PANTHER PTHR39327:SF1 1 237 3.1E-117 T 26-04-2016 PAM18_RS18915 167c1125657c9f81e7e3b0edc238c870 237 SUPERFAMILY SSF54001 71 137 4.76E-7 T 26-04-2016 PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 PANTHER PTHR11260 2 198 7.5E-102 T 26-04-2016 PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 Gene3D G3DSA:3.40.30.10 4 92 1.9E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 80 5.9E-15 T 26-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 Gene3D G3DSA:1.20.1050.10 93 200 1.7E-34 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 PANTHER PTHR11260:SF253 2 198 7.5E-102 T 26-04-2016 PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 196 5.8E-6 T 26-04-2016 IPR004046 Glutathione S-transferase, C-terminal PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 SUPERFAMILY SSF52833 1 85 1.88E-22 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS16150 1357497b86d6468014bedd9fa721ff82 207 SUPERFAMILY SSF47616 80 200 2.23E-28 T 26-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like PAM18_RS26070 4f42ead616429478d36fc87a09064918 258 SMART SM00062 22 243 1.8E-11 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26070 4f42ead616429478d36fc87a09064918 258 SUPERFAMILY SSF53850 23 241 3.17E-35 T 26-04-2016 PAM18_RS26070 4f42ead616429478d36fc87a09064918 258 PANTHER PTHR35936 1 254 4.6E-22 T 26-04-2016 PAM18_RS26070 4f42ead616429478d36fc87a09064918 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 238 2.9E-15 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PAM18_RS26070 4f42ead616429478d36fc87a09064918 258 Gene3D G3DSA:3.40.190.10 31 134 2.2E-13 T 26-04-2016 PAM18_RS17000 b468b2c1fcbc35611fa137ba02087c79 317 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 2.1E-93 T 26-04-2016 IPR007296 Domain of unknown function DUF403 PAM18_RS17000 b468b2c1fcbc35611fa137ba02087c79 317 PANTHER PTHR34595 1 317 4.0E-137 T 26-04-2016 PAM18_RS02635 07781b734992aa91305d4f18df7ec74f 192 SUPERFAMILY SSF81452 6 191 2.62E-49 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS02635 07781b734992aa91305d4f18df7ec74f 192 PANTHER PTHR11403:SF6 6 192 3.5E-84 T 26-04-2016 PAM18_RS02635 07781b734992aa91305d4f18df7ec74f 192 Gene3D G3DSA:1.20.120.80 13 191 7.7E-48 T 26-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 PAM18_RS02635 07781b734992aa91305d4f18df7ec74f 192 Pfam PF00510 Cytochrome c oxidase subunit III 18 190 1.7E-18 T 26-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 PAM18_RS02635 07781b734992aa91305d4f18df7ec74f 192 PANTHER PTHR11403 6 192 3.5E-84 T 26-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 PAM18_RS19425 ad202a13b7f4bbfe5dff5e53bee15fc7 85 Pfam PF10976 Protein of unknown function (DUF2790) 11 83 4.4E-25 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS01640 211b825fdb459bb325e73113f9e66c59 309 Pfam PF06977 SdiA-regulated 51 302 8.0E-107 T 26-04-2016 IPR009722 SdiA-regulated PAM18_RS01640 211b825fdb459bb325e73113f9e66c59 309 Gene3D G3DSA:2.120.10.30 71 294 6.9E-14 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS01640 211b825fdb459bb325e73113f9e66c59 309 SUPERFAMILY SSF50956 13 304 2.35E-57 T 26-04-2016 PAM18_RS19075 8a286d00a5fdfd43226fde3d1f34fc90 135 Pfam PF07366 SnoaL-like polyketide cyclase 9 127 4.0E-38 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS19075 8a286d00a5fdfd43226fde3d1f34fc90 135 Gene3D G3DSA:3.10.450.50 10 133 4.7E-20 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS19075 8a286d00a5fdfd43226fde3d1f34fc90 135 SUPERFAMILY SSF54427 5 133 3.93E-32 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS02835 829bfb87cb60de57f4c783025b34dba3 162 Pfam PF01863 Protein of unknown function DUF45 93 154 1.1E-12 T 26-04-2016 IPR002725 Protein of unknown function DUF45 PAM18_RS02835 829bfb87cb60de57f4c783025b34dba3 162 PANTHER PTHR30399 1 162 1.4E-103 T 26-04-2016 PAM18_RS02835 829bfb87cb60de57f4c783025b34dba3 162 PANTHER PTHR30399:SF4 1 162 1.4E-103 T 26-04-2016 PAM18_RS05885 9902564fd6188f88cdddc11ca2d1841a 346 PANTHER PTHR33376:SF2 3 327 2.5E-115 T 26-04-2016 PAM18_RS05885 9902564fd6188f88cdddc11ca2d1841a 346 PANTHER PTHR33376 3 327 2.5E-115 T 26-04-2016 PAM18_RS05885 9902564fd6188f88cdddc11ca2d1841a 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 321 1.3E-81 T 26-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PAM18_RS09655 28e4a4f78843da2ac6d2ce917af693a5 87 Pfam PF07023 Protein of unknown function (DUF1315) 6 67 1.5E-28 T 26-04-2016 IPR009749 Protein of unknown function DUF1315 PAM18_RS13540 682cca4fe0762d54854c504de1eb8636 305 PANTHER PTHR30477 68 234 2.4E-74 T 26-04-2016 PAM18_RS13540 682cca4fe0762d54854c504de1eb8636 305 Gene3D G3DSA:3.40.50.1980 145 196 9.2E-6 T 26-04-2016 PAM18_RS13540 682cca4fe0762d54854c504de1eb8636 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 93 284 3.5E-13 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PAM18_RS13540 682cca4fe0762d54854c504de1eb8636 305 PANTHER PTHR30477:SF15 68 234 2.4E-74 T 26-04-2016 PAM18_RS13540 682cca4fe0762d54854c504de1eb8636 305 SUPERFAMILY SSF53807 35 300 4.91E-31 T 26-04-2016 PAM18_RS02515 e0a586238703ebac0ca0b1ba5b096662 333 Gene3D G3DSA:2.60.40.1090 198 333 2.3E-6 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS02515 e0a586238703ebac0ca0b1ba5b096662 333 SUPERFAMILY SSF49401 206 332 2.49E-14 T 26-04-2016 IPR008966 Adhesion domain PAM18_RS02515 e0a586238703ebac0ca0b1ba5b096662 333 Pfam PF00419 Fimbrial protein 183 333 1.4E-19 T 26-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 PAM18_RS09105 165ee7ff54e8cc78b5ccf5dde78b6ed8 60 Pfam PF06945 Protein of unknown function (DUF1289) 3 47 2.1E-18 T 26-04-2016 IPR010710 Protein of unknown function DUF1289 PAM18_RS00360 6f7a5b2d8b4145c764265ec7eb25c50c 304 Pfam PF13488 Glycine zipper 71 116 1.2E-7 T 26-04-2016 PAM18_RS17160 1a924afcd5c68606b8b171de65b5d7b5 92 SUPERFAMILY SSF140591 2 90 3.73E-29 T 26-04-2016 PAM18_RS17160 1a924afcd5c68606b8b171de65b5d7b5 92 Pfam PF09059 TyeA 6 86 2.7E-32 T 26-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA PAM18_RS17160 1a924afcd5c68606b8b171de65b5d7b5 92 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 87 5.0E-44 T 26-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA PAM18_RS17160 1a924afcd5c68606b8b171de65b5d7b5 92 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 3.1E-21 T 26-04-2016 IPR013351 Type III secretion system effector delivery regulator TyeA-related PAM18_RS07425 4332f6ad2e8e3c5cc7757d1370f9725a 490 Pfam PF13372 Alginate export 39 485 4.5E-117 T 26-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 PAM18_RS02180 7f27ffd72a331e3cf1490a5639d12334 184 Pfam PF13328 HD domain 17 164 1.7E-10 T 26-04-2016 IPR003607 HD/PDEase domain PAM18_RS02180 7f27ffd72a331e3cf1490a5639d12334 184 PANTHER PTHR21262 6 150 1.2E-30 T 26-04-2016 PAM18_RS02180 7f27ffd72a331e3cf1490a5639d12334 184 SUPERFAMILY SSF109604 4 164 3.01E-31 T 26-04-2016 PAM18_RS20525 3a0ec301cef3340823a24d4829ab4f6b 416 PANTHER PTHR34596 1 416 3.7E-177 T 26-04-2016 PAM18_RS20525 3a0ec301cef3340823a24d4829ab4f6b 416 Pfam PF03573 outer membrane porin, OprD family 23 414 6.8E-158 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS20525 3a0ec301cef3340823a24d4829ab4f6b 416 Gene3D G3DSA:2.40.160.10 27 416 7.7E-150 T 26-04-2016 IPR023614 Porin domain PAM18_RS12670 8de4471d40191f4b4cc7b85d543194b6 146 Gene3D G3DSA:2.80.10.50 3 135 4.7E-13 T 26-04-2016 PAM18_RS12670 8de4471d40191f4b4cc7b85d543194b6 146 SUPERFAMILY SSF50370 3 137 1.07E-15 T 26-04-2016 IPR000772 Ricin B, lectin domain PAM18_RS08350 248462905cd64274e33efd316a7a7710 682 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 639 680 6.7E-16 T 26-04-2016 IPR020011 Motility protein FimV, C-terminal PAM18_RS08350 248462905cd64274e33efd316a7a7710 682 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 182 235 4.5E-12 T 26-04-2016 IPR020012 Motility protein FimV, N-terminal PAM18_RS08350 248462905cd64274e33efd316a7a7710 682 Gene3D G3DSA:1.25.40.10 346 356 3.1E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS08350 248462905cd64274e33efd316a7a7710 682 Gene3D G3DSA:1.25.40.10 450 506 3.1E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS08350 248462905cd64274e33efd316a7a7710 682 Gene3D G3DSA:1.25.40.10 632 660 3.1E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS26770 1e9b87d3031a254e966f8e8abccfee34 173 Pfam PF13511 Domain of unknown function (DUF4124) 7 57 5.2E-15 T 26-04-2016 IPR025392 Domain of unknown function DUF4124 PAM18_RS15125 379e9f5c04e711f51e0e6fe2056f6748 281 PANTHER PTHR34598:SF2 1 281 3.7E-204 T 26-04-2016 PAM18_RS15125 379e9f5c04e711f51e0e6fe2056f6748 281 PANTHER PTHR34598 1 281 3.7E-204 T 26-04-2016 PAM18_RS27435 43a40b581eee806f56de12df03af7c0b 209 PANTHER PTHR30086 1 209 2.5E-107 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS27435 43a40b581eee806f56de12df03af7c0b 209 PANTHER PTHR30086:SF14 1 209 2.5E-107 T 26-04-2016 PAM18_RS27435 43a40b581eee806f56de12df03af7c0b 209 PIRSF PIRSF006324 1 206 1.0E-50 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS27435 43a40b581eee806f56de12df03af7c0b 209 Pfam PF01810 LysE type translocator 16 203 4.9E-32 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS20880 a4f606eab23d6646d7c1fc266ee58f1f 139 Pfam PF09842 Predicted membrane protein (DUF2069) 24 128 5.7E-31 T 26-04-2016 IPR018643 Protein of unknown function DUF2069, membrane PAM18_RS07845 451706c194a580dc049d7c1b2a7d66e3 103 Pfam PF06844 Protein of unknown function (DUF1244) 32 97 3.1E-38 T 26-04-2016 IPR023163 SMc04008-like domain PAM18_RS07845 451706c194a580dc049d7c1b2a7d66e3 103 Gene3D G3DSA:1.10.3340.10 4 89 2.2E-44 T 26-04-2016 IPR023163 SMc04008-like domain PAM18_RS07845 451706c194a580dc049d7c1b2a7d66e3 103 SUPERFAMILY SSF158757 5 82 4.05E-38 T 26-04-2016 IPR023163 SMc04008-like domain PAM18_RS11030 7f2ed2c448cea2614d099e948d0bd69e 223 Pfam PF01841 Transglutaminase-like superfamily 21 136 1.4E-15 T 26-04-2016 IPR002931 Transglutaminase-like PAM18_RS11030 7f2ed2c448cea2614d099e948d0bd69e 223 SUPERFAMILY SSF54001 16 160 3.08E-21 T 26-04-2016 PAM18_RS13070 d1dd0bad7640bae4176c19df34fbdf1a 417 SUPERFAMILY SSF140860 248 313 6.8E-8 T 26-04-2016 PAM18_RS13070 d1dd0bad7640bae4176c19df34fbdf1a 417 Gene3D G3DSA:1.25.40.20 248 354 9.5E-6 T 26-04-2016 IPR020683 Ankyrin repeat-containing domain PAM18_RS21045 f29524ba73f3c1587fdc8bb37088b293 634 PANTHER PTHR30540:SF7 26 589 8.4E-245 T 26-04-2016 PAM18_RS21045 f29524ba73f3c1587fdc8bb37088b293 634 Pfam PF02705 K+ potassium transporter 24 556 1.9E-205 T 26-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PAM18_RS21045 f29524ba73f3c1587fdc8bb37088b293 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 15 634 34.261 T 26-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup PAM18_RS21045 f29524ba73f3c1587fdc8bb37088b293 634 PANTHER PTHR30540 26 589 8.4E-245 T 26-04-2016 PAM18_RS04345 cc34c4047fc293f9103e86a9e8f6a428 274 Pfam PF10703 Molybdenum cofactor biosynthesis protein F 7 270 6.5E-103 T 26-04-2016 IPR024724 Molybdenum cofactor biosynthesis protein F PAM18_RS14775 92f5bca14061b91d66aaeb44078aebbd 101 Pfam PF11154 Protein of unknown function (DUF2934) 4 38 2.0E-14 T 26-04-2016 IPR021327 Protein of unknown function DUF2934 PAM18_RS01390 56eb09a10e9e99d5b7cde7e33d48813f 250 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 3.3E-25 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS09035 b200c34d4f3034c31e28acc478d88aed 123 Pfam PF03692 Putative zinc- or iron-chelating domain 6 97 5.5E-12 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PAM18_RS16100 6998a8da09d1ef242a94cb325fb7ce2a 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 15 162 5.0E-85 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS16100 6998a8da09d1ef242a94cb325fb7ce2a 162 SUPERFAMILY SSF54427 19 148 9.83E-25 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16100 6998a8da09d1ef242a94cb325fb7ce2a 162 Gene3D G3DSA:3.10.450.50 4 160 5.0E-51 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16100 6998a8da09d1ef242a94cb325fb7ce2a 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 8.1E-91 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS25245 907a906f2be7fea106cd06c8dd510630 453 PANTHER PTHR11206 5 450 2.5E-140 T 26-04-2016 PAM18_RS25245 907a906f2be7fea106cd06c8dd510630 453 PANTHER PTHR11206:SF94 5 450 2.5E-140 T 26-04-2016 PAM18_RS25245 907a906f2be7fea106cd06c8dd510630 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 3.3E-71 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS25245 907a906f2be7fea106cd06c8dd510630 453 Pfam PF01554 MatE 23 181 5.2E-20 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS25245 907a906f2be7fea106cd06c8dd510630 453 Pfam PF01554 MatE 248 406 1.5E-13 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 PAM18_RS08105 1ac43e551b4add5336ddd5a2a9636e0b 100 PANTHER PTHR33336 2 94 1.5E-19 T 26-04-2016 PAM18_RS08105 1ac43e551b4add5336ddd5a2a9636e0b 100 Gene3D G3DSA:3.30.70.900 4 89 1.4E-21 T 26-04-2016 PAM18_RS08105 1ac43e551b4add5336ddd5a2a9636e0b 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 74 2.7E-18 T 26-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain PAM18_RS08105 1ac43e551b4add5336ddd5a2a9636e0b 100 SUPERFAMILY SSF54909 3 89 2.57E-22 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel PAM18_RS13275 2a2e903ca52c62fd20e8d1dfcf1ccd23 310 Pfam PF05593 RHS Repeat 229 265 8.0E-5 T 26-04-2016 IPR031325 RHS repeat PAM18_RS13275 2a2e903ca52c62fd20e8d1dfcf1ccd23 310 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 224 249 6.7E-4 T 26-04-2016 IPR006530 YD repeat PAM18_RS24470 ecb43c076c91e157bd5a2f6ea2d1baea 412 PANTHER PTHR12994 1 367 1.5E-130 T 26-04-2016 PAM18_RS24470 ecb43c076c91e157bd5a2f6ea2d1baea 412 Pfam PF03577 Peptidase family C69 11 217 1.1E-9 T 26-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PAM18_RS20415 adf31557f1f27c53482cfea7fd4e24d8 381 PANTHER PTHR10566 91 230 4.0E-40 T 26-04-2016 PAM18_RS20415 adf31557f1f27c53482cfea7fd4e24d8 381 Pfam PF00144 Beta-lactamase 18 373 4.4E-79 T 26-04-2016 IPR001466 Beta-lactamase-related PAM18_RS20415 adf31557f1f27c53482cfea7fd4e24d8 381 SUPERFAMILY SSF56601 7 374 6.47E-79 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS20415 adf31557f1f27c53482cfea7fd4e24d8 381 Gene3D G3DSA:3.40.710.10 3 374 2.2E-84 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like PAM18_RS20415 adf31557f1f27c53482cfea7fd4e24d8 381 PANTHER PTHR10566:SF94 91 230 4.0E-40 T 26-04-2016 PAM18_RS06830 5a84b36e3aea293aaecb036fbe7ab14f 277 Pfam PF13730 Helix-turn-helix domain 14 64 7.1E-12 T 26-04-2016 PAM18_RS06830 5a84b36e3aea293aaecb036fbe7ab14f 277 Gene3D G3DSA:1.10.10.10 14 76 2.4E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain PAM18_RS22785 008ec76c1de50a51d87e86137df8f238 300 ProSitePatterns PS00018 EF-hand calcium-binding domain. 212 224 - T 26-04-2016 IPR018247 EF-Hand 1, calcium-binding site PAM18_RS22785 008ec76c1de50a51d87e86137df8f238 300 Pfam PF12483 E3 Ubiquitin ligase 83 183 7.0E-10 T 26-04-2016 IPR022170 Mitochondrial ubiquitin ligase activator of NFKB 1 GO:0004842|GO:0007005 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.-|UniPathway: UPA00143 PAM18_RS12500 64d679d1cb51e07b18db0118dde9b823 299 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 11 237 1.6E-89 T 26-04-2016 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 PAM18_RS12500 64d679d1cb51e07b18db0118dde9b823 299 Pfam PF03837 RecT family 48 239 2.1E-58 T 26-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 PAM18_RS05855 8d836902c4ea11df5998758a41f0ac64 190 TIGRFAM TIGR04061 AZL_007950_fam: AZL_007950 family protein 18 183 1.2E-70 T 26-04-2016 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 PAM18_RS08450 00b2033890afed40308bccaf9f7f9da5 151 PANTHER PTHR34821:SF1 1 150 1.2E-83 T 26-04-2016 PAM18_RS08450 00b2033890afed40308bccaf9f7f9da5 151 PANTHER PTHR34821 1 150 1.2E-83 T 26-04-2016 PAM18_RS08450 00b2033890afed40308bccaf9f7f9da5 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 144 4.9E-36 T 26-04-2016 IPR006750 Putative inner membrane exporter, YdcZ PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 PANTHER PTHR30217 240 330 4.9E-205 T 26-04-2016 PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 PANTHER PTHR30217 1 218 4.9E-205 T 26-04-2016 PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 PANTHER PTHR30217:SF3 240 330 4.9E-205 T 26-04-2016 PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 PANTHER PTHR30217:SF3 1 218 4.9E-205 T 26-04-2016 PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 Pfam PF01136 Peptidase family U32 75 330 7.1E-65 T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS05215 4192bdf9077fe620f1b01b62f8b347da 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- PAM18_RS08375 5a4cdc4cdec97e3ebd7d8676a6567a6f 250 SUPERFAMILY SSF53335 15 225 3.62E-13 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS08375 5a4cdc4cdec97e3ebd7d8676a6567a6f 250 Gene3D G3DSA:3.40.50.150 54 225 6.0E-10 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS14865 9dd31f8ca30d93c49f980170c18de9f9 95 Pfam PF10711 Hypothetical protein (DUF2513) 2 84 2.2E-17 T 26-04-2016 IPR019650 Protein of unknown function DUF2513 PAM18_RS08660 78424c6f3c45b0db226a09df2de81aa3 438 Gene3D G3DSA:2.40.160.10 27 438 5.7E-121 T 26-04-2016 IPR023614 Porin domain PAM18_RS08660 78424c6f3c45b0db226a09df2de81aa3 438 SUPERFAMILY SSF56935 49 246 1.05E-27 T 26-04-2016 PAM18_RS08660 78424c6f3c45b0db226a09df2de81aa3 438 SUPERFAMILY SSF56935 281 438 1.05E-27 T 26-04-2016 PAM18_RS08660 78424c6f3c45b0db226a09df2de81aa3 438 Pfam PF07396 Phosphate-selective porin O and P 53 438 2.6E-107 T 26-04-2016 IPR010870 Phosphate-selective porin O/P PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 23 46 2.8E-48 T 26-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 72 94 2.8E-48 T 26-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 48 67 2.8E-48 T 26-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 104 126 2.8E-48 T 26-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 154 1.5E-43 T 26-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 PIRSF PIRSF003165 1 162 4.1E-59 T 26-04-2016 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 SUPERFAMILY SSF48452 30 135 9.49E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS17120 bf933cbf735f9d4535b4fa1278523061 168 Gene3D G3DSA:1.25.40.10 34 138 1.1E-12 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 PAM18_RS27470 064f1c45b32b7742ef34f1ad90e092e8 160 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 145 3.3E-53 T 26-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PAM18_RS27470 064f1c45b32b7742ef34f1ad90e092e8 160 PIRSF PIRSF016548 1 155 2.2E-68 T 26-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PAM18_RS22165 ba116f73e8f8f6bd21c55662e1935c8f 159 Pfam PF10722 Putative bacterial sensory transduction regulator 11 135 5.3E-17 T 26-04-2016 IPR019660 Putative sensory transduction regulator YbjN PAM18_RS13395 8f6783b1b446f2f2307b389873142d87 724 Pfam PF04632 Fusaric acid resistance protein family 19 699 1.9E-152 T 26-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PAM18_RS13395 8f6783b1b446f2f2307b389873142d87 724 PANTHER PTHR30509:SF1 6 256 4.6E-155 T 26-04-2016 PAM18_RS13395 8f6783b1b446f2f2307b389873142d87 724 PANTHER PTHR30509:SF1 332 671 4.6E-155 T 26-04-2016 PAM18_RS13395 8f6783b1b446f2f2307b389873142d87 724 PANTHER PTHR30509 6 256 4.6E-155 T 26-04-2016 PAM18_RS13395 8f6783b1b446f2f2307b389873142d87 724 PANTHER PTHR30509 332 671 4.6E-155 T 26-04-2016 PAM18_RS08255 213f4fc788171eb3a7390c95f0e13b96 342 Pfam PF13515 Fusaric acid resistance protein-like 190 322 1.5E-9 T 26-04-2016 PAM18_RS08255 213f4fc788171eb3a7390c95f0e13b96 342 PIRSF PIRSF029594 7 342 4.8E-178 T 26-04-2016 IPR016926 Uncharacterised conserved protein UCP029594 PAM18_RS08255 213f4fc788171eb3a7390c95f0e13b96 342 Pfam PF11168 Protein of unknown function (DUF2955) 14 153 2.6E-48 T 26-04-2016 IPR022604 Protein of unknown function DUF2955 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457 236 343 1.9E-70 T 26-04-2016 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457 6 50 1.9E-70 T 26-04-2016 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457 66 213 1.9E-70 T 26-04-2016 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 Pfam PF02628 Cytochrome oxidase assembly protein 13 320 5.9E-82 T 26-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457:SF1 236 343 1.9E-70 T 26-04-2016 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457:SF1 6 50 1.9E-70 T 26-04-2016 PAM18_RS00570 676231d5137995204d1a811a5ddb1b5a 357 PANTHER PTHR35457:SF1 66 213 1.9E-70 T 26-04-2016 PAM18_RS28335 86109d8d6f4c1715c1599d99f4517d43 182 Pfam PF11736 Protein of unknown function (DUF3299) 28 175 8.0E-46 T 26-04-2016 IPR021727 Protein of unknown function DUF3299 PAM18_RS19245 ff2d55e972bac8f67e2fa066a5f06cb5 78 Gene3D G3DSA:3.10.20.30 41 70 6.2E-9 T 26-04-2016 IPR012675 Beta-grasp domain PAM18_RS19245 ff2d55e972bac8f67e2fa066a5f06cb5 78 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 77 1.3E-16 T 26-04-2016 PAM18_RS19245 ff2d55e972bac8f67e2fa066a5f06cb5 78 SUPERFAMILY SSF54292 1 77 1.31E-15 T 26-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PAM18_RS08745 a2d8731874e3ffd4285f0dcc50ac1ecf 306 PANTHER PTHR38103:SF1 2 305 6.7E-161 T 26-04-2016 PAM18_RS08745 a2d8731874e3ffd4285f0dcc50ac1ecf 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 44.932 T 26-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PAM18_RS08745 a2d8731874e3ffd4285f0dcc50ac1ecf 306 PANTHER PTHR38103 2 305 6.7E-161 T 26-04-2016 PAM18_RS08745 a2d8731874e3ffd4285f0dcc50ac1ecf 306 Pfam PF04381 Putative exonuclease, RdgC 1 300 2.9E-115 T 26-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 PAM18_RS26875 6130c8938b816946c960fada056d2219 86 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 12 84 2.8E-27 T 26-04-2016 IPR018680 Protein of unknown function DUF2164 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 Gene3D G3DSA:3.10.50.40 130 145 2.2E-25 T 26-04-2016 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 Gene3D G3DSA:3.10.50.40 5 84 2.2E-25 T 26-04-2016 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 141 1.3E-23 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 SUPERFAMILY SSF54534 9 143 4.71E-40 T 26-04-2016 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 PANTHER PTHR10516:SF329 1 86 5.4E-29 T 26-04-2016 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 PANTHER PTHR10516:SF329 133 146 5.4E-29 T 26-04-2016 PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 PANTHER PTHR10516 1 86 5.4E-29 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS23770 1bd17f9890f7937001024c2439d3e9e6 146 PANTHER PTHR10516 133 146 5.4E-29 T 26-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAM18_RS05835 6f64481c85e503d0a5c303df76aafe2e 131 Pfam PF14248 Domain of unknown function (DUF4345) 7 121 3.2E-16 T 26-04-2016 IPR025597 Protein of unknown function DUF4345 PAM18_RS16880 ab932f0c1719d72fbf7c6566057e2ac7 115 Gene3D G3DSA:3.40.30.10 14 77 6.6E-4 T 26-04-2016 IPR012336 Thioredoxin-like fold PAM18_RS16105 b77f96a7cc791472ef2a689dda85f26e 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 15 162 4.0E-84 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS16105 b77f96a7cc791472ef2a689dda85f26e 162 Gene3D G3DSA:3.10.450.50 2 160 2.0E-51 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16105 b77f96a7cc791472ef2a689dda85f26e 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 1.8E-88 T 26-04-2016 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 PAM18_RS16105 b77f96a7cc791472ef2a689dda85f26e 162 SUPERFAMILY SSF54427 20 149 4.88E-25 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS00695 f9f9a41bbaf99ba39079742df660c095 365 PANTHER PTHR32196:SF22 1 362 1.4E-109 T 26-04-2016 PAM18_RS00695 f9f9a41bbaf99ba39079742df660c095 365 PANTHER PTHR32196 1 362 1.4E-109 T 26-04-2016 PAM18_RS00695 f9f9a41bbaf99ba39079742df660c095 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 338 3.1E-47 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PAM18_RS05980 3725f1ef515644c7b60cbda491ad6e46 194 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 10 189 2.6E-80 T 26-04-2016 IPR018715 Protein of unknown function DUF2239 PAM18_RS09585 cce9af6411620de80ca145b899fe883b 382 Pfam PF05134 Type II secretion system (T2SS), protein L 7 222 5.3E-57 T 26-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain PAM18_RS09585 cce9af6411620de80ca145b899fe883b 382 SUPERFAMILY SSF53067 6 139 5.31E-26 T 26-04-2016 PAM18_RS09585 cce9af6411620de80ca145b899fe883b 382 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 381 1.1E-107 T 26-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 PAM18_RS09585 cce9af6411620de80ca145b899fe883b 382 Pfam PF12693 GspL periplasmic domain 226 381 8.7E-46 T 26-04-2016 IPR025691 GspL periplasmic domain PAM18_RS09585 cce9af6411620de80ca145b899fe883b 382 PIRSF PIRSF015761 35 382 2.3E-49 T 26-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 PAM18_RS04690 89f38b5770a552e43412d745bd08708c 82 Pfam PF07119 Protein of unknown function (DUF1375) 1 68 2.2E-22 T 26-04-2016 IPR010780 Protein of unknown function DUF1375 PAM18_RS22975 82e441af5302c3eff3fba830a75313b1 153 Pfam PF05258 Protein of unknown function (DUF721) 14 96 2.0E-10 T 26-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 PAM18_RS09675 f1789a504053a3e88cd6b5186fae97de 455 Gene3D G3DSA:2.50.20.10 160 308 2.4E-39 T 26-04-2016 PAM18_RS09675 f1789a504053a3e88cd6b5186fae97de 455 Gene3D G3DSA:2.50.20.10 341 451 2.4E-39 T 26-04-2016 PAM18_RS09675 f1789a504053a3e88cd6b5186fae97de 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 2.1E-162 T 26-04-2016 IPR010752 Protein of unknown function DUF1329 PAM18_RS04490 12a1c468836fb1a1d48db6c7f1f0a2d4 152 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 46 128 4.4E-5 T 26-04-2016 PAM18_RS07205 8c8b34a972bc4199f3f7db30ab25fb2f 112 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 21 87 6.0E-27 T 26-04-2016 IPR009707 Membrane protein GlpM/YdgC PAM18_RS07205 8c8b34a972bc4199f3f7db30ab25fb2f 112 Pfam PF06942 GlpM protein 5 111 1.1E-49 T 26-04-2016 IPR009707 Membrane protein GlpM/YdgC PAM18_RS23405 c137004de982f1d6efae4e2008779b78 589 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 31 586 1.4E-252 T 26-04-2016 IPR018671 Protein of unknown function DUF2138 PAM18_RS02745 5e66decb562026a475753815ab655028 139 Pfam PF06476 Protein of unknown function (DUF1090) 21 128 4.9E-34 T 26-04-2016 IPR009468 Protein of unknown function DUF1090 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 SUPERFAMILY SSF46626 355 421 5.8E-5 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 Gene3D G3DSA:1.10.760.10 615 634 1.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 Gene3D G3DSA:1.10.760.10 485 571 1.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 Gene3D G3DSA:1.10.760.10 358 388 1.6E-10 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 SUPERFAMILY SSF46626 473 495 5.48E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 SUPERFAMILY SSF46626 354 375 5.48E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 SUPERFAMILY SSF46626 527 571 5.48E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15215 f08e9c10d257d30f34ac5ac1bb4c1e7b 634 SUPERFAMILY SSF46626 615 634 5.48E-16 T 26-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 PAM18_RS15360 6b2fadd3e32d918783c518118e934c7e 664 PANTHER PTHR37031 259 664 5.6E-144 T 26-04-2016 PAM18_RS15360 6b2fadd3e32d918783c518118e934c7e 664 SUPERFAMILY SSF56300 319 361 4.8E-7 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS15360 6b2fadd3e32d918783c518118e934c7e 664 SUPERFAMILY SSF56300 412 566 4.8E-7 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like PAM18_RS15360 6b2fadd3e32d918783c518118e934c7e 664 PANTHER PTHR37031:SF2 259 664 5.6E-144 T 26-04-2016 PAM18_RS14670 7813afc4f09a45d8cf69d1b166188d6a 458 Pfam PF14518 Iron-containing redox enzyme 100 265 3.0E-33 T 26-04-2016 IPR028201 PqqC-like protein PAM18_RS14670 7813afc4f09a45d8cf69d1b166188d6a 458 SMART SM01236 131 228 1.8E-27 T 26-04-2016 PAM18_RS14670 7813afc4f09a45d8cf69d1b166188d6a 458 Gene3D G3DSA:1.20.910.10 124 250 6.0E-8 T 26-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 PAM18_RS03155 2fd2c568f6433c0e0f112a02b43961c4 113 Pfam PF05939 Phage minor tail protein 5 111 3.7E-32 T 26-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail PAM18_RS27410 54022f03d121ba999ae832aa620fe552 195 PANTHER PTHR30353 1 180 4.4E-97 T 26-04-2016 IPR032818 DedA family PAM18_RS27410 54022f03d121ba999ae832aa620fe552 195 PANTHER PTHR30353:SF8 1 180 4.4E-97 T 26-04-2016 PAM18_RS27410 54022f03d121ba999ae832aa620fe552 195 Pfam PF09335 SNARE associated Golgi protein 22 138 4.9E-18 T 26-04-2016 IPR032816 SNARE associated Golgi protein PAM18_RS12700 8e203f2c3a7684a06d8e3804dac14b5a 586 SUPERFAMILY SSF69279 263 414 6.72E-5 T 26-04-2016 PAM18_RS18830 c222c5cc5a48f8550c2bb0d23bfad623 447 PANTHER PTHR30373 380 447 6.8E-126 T 26-04-2016 PAM18_RS18830 c222c5cc5a48f8550c2bb0d23bfad623 447 PANTHER PTHR30373 65 315 6.8E-126 T 26-04-2016 PAM18_RS18830 c222c5cc5a48f8550c2bb0d23bfad623 447 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 76 199 1.4E-37 T 26-04-2016 IPR007621 TPM domain PAM18_RS18830 c222c5cc5a48f8550c2bb0d23bfad623 447 PANTHER PTHR30373:SF2 380 447 6.8E-126 T 26-04-2016 PAM18_RS18830 c222c5cc5a48f8550c2bb0d23bfad623 447 PANTHER PTHR30373:SF2 65 315 6.8E-126 T 26-04-2016 PAM18_RS05240 fe059a0cb50b1488ad313b42edf2f0fc 239 PIRSF PIRSF029636 10 239 6.7E-96 T 26-04-2016 IPR016929 Uncharacterised conserved protein UCP029636 PAM18_RS05240 fe059a0cb50b1488ad313b42edf2f0fc 239 Pfam PF15579 Immunity protein 52 139 234 7.3E-25 T 26-04-2016 IPR028969 Immunity protein 52 PAM18_RS17710 f8258efbed6c488d0a4e95a5313d0f9c 254 PANTHER PTHR31881:SF3 11 254 2.9E-138 T 26-04-2016 PAM18_RS17710 f8258efbed6c488d0a4e95a5313d0f9c 254 Pfam PF04654 Protein of unknown function, DUF599 18 228 7.4E-62 T 26-04-2016 IPR006747 Protein of unknown function DUF599 PAM18_RS17710 f8258efbed6c488d0a4e95a5313d0f9c 254 PANTHER PTHR31881 11 254 2.9E-138 T 26-04-2016 PAM18_RS17095 83a94af08d391410fa61ecc34f15a8a0 137 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 2 125 9.8E-53 T 26-04-2016 IPR013400 Type III secretion system chaperone, YscW PAM18_RS17095 83a94af08d391410fa61ecc34f15a8a0 137 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 21 114 1.8E-11 T 26-04-2016 PAM18_RS22805 2b8bc98bad7d6d71c0c25140ba7eb7a3 354 Pfam PF09375 Imelysin 36 332 1.0E-56 T 26-04-2016 PAM18_RS25390 40f14fb1380249dbac9e7c72a5b15b33 288 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 21 258 4.9E-15 T 26-04-2016 PAM18_RS22065 61609f370409d3b5ccfdcfd5ad6e75a6 95 ProDom PD066019 ORF PA0718 PHAGE 6 95 3.0E-46 T 26-04-2016 PAM18_RS22395 172336d328560322caeb0920afb71a7e 489 PANTHER PTHR11101 2 489 6.1E-198 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS22395 172336d328560322caeb0920afb71a7e 489 Gene3D G3DSA:1.20.1250.20 52 200 2.3E-4 T 26-04-2016 PAM18_RS22395 172336d328560322caeb0920afb71a7e 489 PANTHER PTHR11101:SF59 2 489 6.1E-198 T 26-04-2016 PAM18_RS22395 172336d328560322caeb0920afb71a7e 489 Pfam PF01384 Phosphate transporter family 201 478 2.8E-43 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS22395 172336d328560322caeb0920afb71a7e 489 Pfam PF01384 Phosphate transporter family 30 180 1.2E-35 T 26-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 PAM18_RS18785 607fccb33f2be39f46b089789caf1b90 246 PANTHER PTHR30433 2 246 8.5E-125 T 26-04-2016 PAM18_RS18785 607fccb33f2be39f46b089789caf1b90 246 PANTHER PTHR30433:SF3 2 246 8.5E-125 T 26-04-2016 IPR022522 Flagellar motor stator, MotA PAM18_RS18785 607fccb33f2be39f46b089789caf1b90 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 219 3.8E-25 T 26-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PAM18_RS13455 8fef1d680c160149cda6be33605221f5 342 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 340 6.1E-136 T 26-04-2016 IPR013399 CRISPR-associated protein Csy3 PAM18_RS13455 8fef1d680c160149cda6be33605221f5 342 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 8 337 5.4E-147 T 26-04-2016 IPR013399 CRISPR-associated protein Csy3 PAM18_RS06855 ded2e1ff4a96d8a87a919668e173b751 99 SUPERFAMILY SSF57938 10 50 8.63E-5 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PAM18_RS06855 ded2e1ff4a96d8a87a919668e173b751 99 Gene3D G3DSA:2.10.230.10 19 50 2.5E-4 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PAM18_RS12580 c0a133686582fbce7d913dcb11e6478a 147 Gene3D G3DSA:3.30.1330.70 8 141 5.4E-24 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS12580 c0a133686582fbce7d913dcb11e6478a 147 Pfam PF05866 Endodeoxyribonuclease RusA 12 139 5.7E-35 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS12580 c0a133686582fbce7d913dcb11e6478a 147 SUPERFAMILY SSF103084 9 140 1.06E-20 T 26-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 PAM18_RS22080 fbe5fe753e1535c2e639226894f3a38c 97 Pfam PF11006 Protein of unknown function (DUF2845) 19 93 8.2E-17 T 26-04-2016 IPR021268 Protein of unknown function DUF2845 PAM18_RS12760 0960db8cd37412694a2052edea6d4980 170 Pfam PF11776 Nickel/cobalt transporter regulator 136 162 3.6E-6 T 26-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB PAM18_RS25225 516ea053ebe43745bd32068f884e953f 130 Pfam PF03692 Putative zinc- or iron-chelating domain 25 125 2.4E-16 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein PAM18_RS23645 7d5954ee95faf60c6e93791c24435f47 56 Pfam PF11293 Protein of unknown function (DUF3094) 2 56 3.1E-35 T 26-04-2016 IPR021444 Protein of unknown function DUF3094 PAM18_RS10275 8f8a4d1fd04e7227af180edbfabf906b 118 Pfam PF07238 PilZ domain 17 106 2.4E-13 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS23580 4ed3e70b23f70826fc0cbb9dfbe566ec 356 Pfam PF04932 O-Antigen ligase 97 230 2.8E-9 T 26-04-2016 IPR007016 O-antigen ligase-related PAM18_RS04445 52afac8a39373e03eb4b3514b60bfbfa 118 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 115 2.3E-21 T 26-04-2016 IPR007360 Invasion gene expression up-regulator, SirB PAM18_RS22405 1ab98afdc5529718ac1e027ea7e8a876 168 Pfam PF07811 TadE-like protein 26 68 3.7E-6 T 26-04-2016 IPR012495 TadE-like PAM18_RS06865 7a4b888bb967c66c46ce6f78719e37b4 139 SUPERFAMILY SSF143100 4 65 8.89E-7 T 26-04-2016 PAM18_RS25730 0d8352d12f83347049413270374aec99 200 PANTHER PTHR39321 21 200 2.2E-50 T 26-04-2016 PAM18_RS25730 0d8352d12f83347049413270374aec99 200 SUPERFAMILY SSF52374 27 177 1.56E-21 T 26-04-2016 PAM18_RS25730 0d8352d12f83347049413270374aec99 200 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 61 4.9E-7 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS25730 0d8352d12f83347049413270374aec99 200 Gene3D G3DSA:3.40.50.620 26 189 5.8E-27 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAM18_RS25730 0d8352d12f83347049413270374aec99 200 Pfam PF01467 Cytidylyltransferase-like 28 156 5.2E-6 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PAM18_RS07720 3a89341ea16463e3b3abc9719a27fbc6 441 Gene3D G3DSA:1.10.575.10 156 329 4.0E-33 T 26-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 PAM18_RS07720 3a89341ea16463e3b3abc9719a27fbc6 441 SUPERFAMILY SSF48537 147 366 1.06E-38 T 26-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 PAM18_RS09660 4513a0d893a73e04f920e9f4793aaa5c 277 Pfam PF10977 Protein of unknown function (DUF2797) 40 273 2.5E-98 T 26-04-2016 IPR021246 Protein of unknown function DUF2797 PAM18_RS05255 cb36576f48a34ad98c2423bdb65385cc 175 Pfam PF13503 Domain of unknown function (DUF4123) 17 143 8.8E-23 T 26-04-2016 IPR025391 Domain of unknown function DUF4123 PAM18_RS02880 d1e00c39ad466d0972ada456a0233978 115 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 4 108 1.0E-5 T 26-04-2016 IPR018958 SMI1/KNR4-like domain PAM18_RS02880 d1e00c39ad466d0972ada456a0233978 115 SUPERFAMILY SSF160631 4 108 3.14E-11 T 26-04-2016 PAM18_RS21190 ca60af2436c655ab3916329819d35cc9 370 SUPERFAMILY SSF53187 145 363 1.42E-42 T 26-04-2016 PAM18_RS21190 ca60af2436c655ab3916329819d35cc9 370 SUPERFAMILY SSF53187 18 109 1.42E-42 T 26-04-2016 PAM18_RS21190 ca60af2436c655ab3916329819d35cc9 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 109 9.7E-9 T 26-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PAM18_RS21190 ca60af2436c655ab3916329819d35cc9 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 145 357 7.6E-16 T 26-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 PAM18_RS21190 ca60af2436c655ab3916329819d35cc9 370 Gene3D G3DSA:3.40.630.10 19 264 4.6E-13 T 26-04-2016 PAM18_RS26530 7b0ca062a6b8cf9f9fbb219b6bda6e6a 153 Pfam PF03682 Uncharacterised protein family (UPF0158) 1 152 7.6E-57 T 26-04-2016 IPR005361 Uncharacterised protein family UPF0158 PAM18_RS21525 101d6b3609fa9b1146abfd77073eab2e 110 ProDom PD140749 ORF PHAGE PA0727 1 109 2.0E-49 T 26-04-2016 PAM18_RS26160 7a2edeeed5de0960c5f40bb95411c9f1 401 Pfam PF04932 O-Antigen ligase 198 322 1.2E-10 T 26-04-2016 IPR007016 O-antigen ligase-related PAM18_RS14995 45961973d1a43e8987cb2f9cb590ae64 142 Pfam PF12680 SnoaL-like domain 16 111 2.1E-8 T 26-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain PAM18_RS14995 45961973d1a43e8987cb2f9cb590ae64 142 SUPERFAMILY SSF54427 10 118 3.51E-19 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS14995 45961973d1a43e8987cb2f9cb590ae64 142 Gene3D G3DSA:3.10.450.50 7 119 2.6E-17 T 26-04-2016 IPR032710 NTF2-like domain PAM18_RS16495 8899f1ea99e8bb8589882175532954f8 259 PANTHER PTHR30269 7 259 2.1E-169 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS16495 8899f1ea99e8bb8589882175532954f8 259 Pfam PF01925 Sulfite exporter TauE/SafE 15 249 2.2E-40 T 26-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 PAM18_RS16495 8899f1ea99e8bb8589882175532954f8 259 PANTHER PTHR30269:SF25 7 259 2.1E-169 T 26-04-2016 PAM18_RS14810 f14b471a890c454c9644013fa4aeb325 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 304 2.2E-13 T 26-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PAM18_RS14810 f14b471a890c454c9644013fa4aeb325 331 PANTHER PTHR34697 11 325 8.2E-37 T 26-04-2016 PAM18_RS14810 f14b471a890c454c9644013fa4aeb325 331 PANTHER PTHR34697:SF2 11 325 8.2E-37 T 26-04-2016 PAM18_RS26820 056282d0cf2bccbb017aba66f7df1ae1 272 Pfam PF02517 CAAX protease self-immunity 169 258 9.9E-20 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 PAM18_RS26820 056282d0cf2bccbb017aba66f7df1ae1 272 PANTHER PTHR10794 49 271 2.8E-129 T 26-04-2016 PAM18_RS26820 056282d0cf2bccbb017aba66f7df1ae1 272 PANTHER PTHR10794:SF54 49 271 2.8E-129 T 26-04-2016 PAM18_RS28565 3881b5d64e5daf1383d40c15443e8fac 120 Pfam PF09498 Protein of unknown function (DUF2388) 55 117 2.5E-21 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS28565 3881b5d64e5daf1383d40c15443e8fac 120 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 51 117 9.0E-20 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS21975 46018cc91398a44d50027c710cb75df6 358 Pfam PF09925 Predicted membrane protein (DUF2157) 52 181 1.3E-15 T 26-04-2016 IPR018677 Domain of unknown function DUF2157 PAM18_RS02825 e0b283e903cc2f7780a6e83435ee7b11 255 SUPERFAMILY SSF53335 15 207 5.11E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02825 e0b283e903cc2f7780a6e83435ee7b11 255 Pfam PF08241 Methyltransferase domain 47 135 3.1E-16 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 PAM18_RS02825 e0b283e903cc2f7780a6e83435ee7b11 255 PANTHER PTHR10108 9 180 1.7E-50 T 26-04-2016 PAM18_RS02825 e0b283e903cc2f7780a6e83435ee7b11 255 Gene3D G3DSA:3.40.50.150 10 229 1.5E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PAM18_RS02825 e0b283e903cc2f7780a6e83435ee7b11 255 PANTHER PTHR10108:SF805 9 180 1.7E-50 T 26-04-2016 PAM18_RS24700 61335bac7a38688e5aec3bf526e2070b 297 Pfam PF04228 Putative neutral zinc metallopeptidase 1 292 2.1E-136 T 26-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PAM18_RS24700 61335bac7a38688e5aec3bf526e2070b 297 PANTHER PTHR30168 2 297 4.6E-156 T 26-04-2016 PAM18_RS19640 a441fb16cf0ec1c7bad2dc191d099e24 199 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 1.1E-57 T 26-04-2016 IPR009698 Protein of unknown function DUF1282 PAM18_RS02600 02423319e9c42261a2faa503be21927e 174 PANTHER PTHR30154 1 174 1.1E-94 T 26-04-2016 PAM18_RS02600 02423319e9c42261a2faa503be21927e 174 PANTHER PTHR30154:SF27 1 174 1.1E-94 T 26-04-2016 PAM18_RS05820 aab417acf9dc182e837974359b2375e6 153 Pfam PF11162 Protein of unknown function (DUF2946) 12 149 1.7E-18 T 26-04-2016 IPR021333 Protein of unknown function DUF2946 PAM18_RS20060 93885bd433c6496b785aecf8bd467faa 237 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 236 3.5E-73 T 26-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PAM18_RS20060 93885bd433c6496b785aecf8bd467faa 237 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 55 224 6.7E-14 T 26-04-2016 IPR010239 Conserved hypothetical protein CHP02001 PAM18_RS01385 1b991d756fa7fbe57372f6e06a43abbd 252 Pfam PF01435 Peptidase family M48 73 246 2.1E-25 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 PAM18_RS01385 1b991d756fa7fbe57372f6e06a43abbd 252 PANTHER PTHR22726:SF4 7 252 2.7E-143 T 26-04-2016 PAM18_RS01385 1b991d756fa7fbe57372f6e06a43abbd 252 PANTHER PTHR22726 7 252 2.7E-143 T 26-04-2016 PAM18_RS01385 1b991d756fa7fbe57372f6e06a43abbd 252 Gene3D G3DSA:3.30.2010.10 65 145 5.1E-21 T 26-04-2016 PAM18_RS11640 601a22d6da241e0656cbebe7806c946a 361 Pfam PF05359 Domain of Unknown Function (DUF748) 139 275 5.1E-13 T 26-04-2016 IPR008023 Protein of unknown function DUF748 PAM18_RS00630 29b659316d48f0a07f31a849e25df2ed 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 87 4.6E-8 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PAM18_RS22795 55ccdd59df62a62b1f6e34edc6963cee 446 Pfam PF09375 Imelysin 67 423 1.9E-96 T 26-04-2016 PAM18_RS24200 70d51b58d47bcc95b17720f4e3257d25 195 Pfam PF03923 Uncharacterized lipoprotein 39 192 7.3E-12 T 26-04-2016 IPR005619 Uncharacterised protein family, YajG PAM18_RS00255 169ab4e23d32449fd30e057c3d2cdebf 553 SUPERFAMILY SSF53182 210 335 6.54E-11 T 26-04-2016 PAM18_RS00255 169ab4e23d32449fd30e057c3d2cdebf 553 SUPERFAMILY SSF53182 380 401 6.54E-11 T 26-04-2016 PAM18_RS00255 169ab4e23d32449fd30e057c3d2cdebf 553 SUPERFAMILY SSF53182 459 507 6.54E-11 T 26-04-2016 PAM18_RS28450 12e951cb4f9451098d1bb1c4af595100 142 PANTHER PTHR22911 5 140 9.7E-26 T 26-04-2016 PAM18_RS28450 12e951cb4f9451098d1bb1c4af595100 142 SUPERFAMILY SSF103481 46 141 7.06E-20 T 26-04-2016 PAM18_RS28450 12e951cb4f9451098d1bb1c4af595100 142 Pfam PF00892 EamA-like transporter family 4 139 2.1E-24 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 PAM18_RS08600 c017869b17cf1da8c961b2c47406f042 173 Pfam PF11745 Protein of unknown function (DUF3304) 20 145 2.0E-39 T 26-04-2016 IPR021733 Protein of unknown function DUF3304 PAM18_RS08240 102ccf765410a0a864391cc3f28167b2 172 Pfam PF02293 AmiS/UreI family transporter 2 168 3.3E-56 T 26-04-2016 IPR003211 AmiS/UreI transporter GO:0006810|GO:0016020 PAM18_RS21980 06d8e9b742e3005f99cc7a764d42abed 271 Pfam PF16106 Domain of unknown function (DUF4824) 19 265 1.8E-89 T 26-04-2016 IPR032249 Protein of unknown function DUF4824 PAM18_RS18520 f84969c89ca1466fbb756c81df16318b 425 Pfam PF06181 Protein of unknown function (DUF989) 4 294 2.6E-128 T 26-04-2016 IPR010389 Domain of unknown function DUF989 PAM18_RS04275 55775a799a6a8fc3858ba561814ee075 86 Pfam PF10976 Protein of unknown function (DUF2790) 11 83 8.5E-23 T 26-04-2016 IPR021245 Protein of unknown function DUF2790 PAM18_RS06925 031f6b74ca3085c28c843e3d8f69b477 106 Pfam PF05135 Phage gp6-like head-tail connector protein 1 101 1.0E-14 T 26-04-2016 IPR021146 Phage gp6-like head-tail connector protein PAM18_RS16265 77cb91bf5761874d9eca866ad4fbcc12 175 Pfam PF11356 Type II secretion system protein C 38 162 1.1E-12 T 26-04-2016 IPR024961 Type II secretion system protein C, N-terminal PAM18_RS11425 7686728c5eff5a03ff236a3011082875 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 2 63 8.8E-25 T 26-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system PAM18_RS23565 8462f0c2e3d98d34950ec184fde466ae 751 Pfam PF07793 Protein of unknown function (DUF1631) 24 745 1.5E-255 T 26-04-2016 IPR012434 Protein of unknown function DUF1631 PAM18_RS06960 f87dbd541a8764516178df9fe11b9ffe 713 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 134 204 1.6E-20 T 26-04-2016 IPR013491 Caudovirus, tape measure, N-terminal PAM18_RS13400 2c75f0afaec1cbd58ccf1f9ace9a70a0 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 2.3E-15 T 26-04-2016 IPR012451 Protein of unknown function DUF1656 PAM18_RS26725 ac701eb40511638599d8bf3435befedd 464 Pfam PF13163 Protein of unknown function (DUF3999) 32 456 4.5E-148 T 26-04-2016 IPR025060 Protein of unknown function DUF3999 PAM18_RS11385 e85f14787e089b35cccddb2c9b35a6f5 124 Pfam PF16703 Domain of unknown function (DUF5064) 1 115 5.3E-46 T 26-04-2016 IPR032024 Protein of unknown function DUF5064 PAM18_RS22235 45b3b6f57a1762bd108c7362f659f41b 197 Pfam PF04612 Type II secretion system (T2SS), protein M 24 190 4.7E-47 T 26-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 PAM18_RS23875 aab5efa9d06de6cd16ac3c99909f3ce2 618 Pfam PF13387 Domain of unknown function (DUF4105) 119 291 2.0E-60 T 26-04-2016 IPR025178 Domain of unknown function DUF4105 PAM18_RS07840 17b341176dee7ffa3ef1cc41de27c208 112 Gene3D G3DSA:3.20.160.10 7 110 3.2E-43 T 26-04-2016 PAM18_RS07840 17b341176dee7ffa3ef1cc41de27c208 112 Pfam PF08888 HopJ type III effector protein 4 108 1.9E-38 T 26-04-2016 IPR014984 HopJ type III effector protein PAM18_RS21625 624fb19fc74213c720e33cd3bc7cca85 107 Pfam PF11804 Protein of unknown function (DUF3325) 2 101 1.2E-30 T 26-04-2016 IPR021762 Protein of unknown function DUF3325 PAM18_RS27860 06344119da127168214d1efdf1c700bc 123 Pfam PF09685 Domain of unknown function (DUF4870) 17 122 3.5E-40 T 26-04-2016 IPR019109 Protein of unknown function DUF4870 PAM18_RS05260 1173b3683f2aeec912858dcf1bc72024 131 Pfam PF05488 PAAR motif 2 52 2.2E-15 T 26-04-2016 IPR008727 PAAR motif PAM18_RS00555 78f9ea2bc875a632bd82888f0d7b9e7f 69 Pfam PF11137 Protein of unknown function (DUF2909) 2 60 1.9E-20 T 26-04-2016 IPR021313 Protein of unknown function DUF2909 PAM18_RS04125 ba5da04e561b039d4c8813459d4ca84b 162 PIRSF PIRSF030820 1 162 6.4E-62 T 26-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PAM18_RS04125 ba5da04e561b039d4c8813459d4ca84b 162 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 159 1.1E-38 T 26-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 PAM18_RS22560 989604be29848654d878af3457acc016 119 Pfam PF07238 PilZ domain 4 98 3.4E-5 T 26-04-2016 IPR009875 PilZ domain GO:0035438 PAM18_RS24675 f0dda712c289d3ebfcb59949be44ad94 170 Pfam PF13590 Domain of unknown function (DUF4136) 37 165 6.4E-11 T 26-04-2016 IPR025411 Domain of unknown function DUF4136 PAM18_RS21090 0114a9e8d8da9e27ee69cfc58c0f0009 124 Pfam PF16931 Putative phage holin 1 120 3.6E-32 T 26-04-2016 IPR032637 Putative phage holin-like PAM18_RS12560 58ca11fb24f92ebb1341a394aa92732a 190 Gene3D G3DSA:1.10.3600.10 15 147 4.0E-18 T 26-04-2016 IPR009364 Putative bacterial toxin ydaT PAM18_RS14055 7cb68b8b3fcef6c4441aa62b054f5779 205 PANTHER PTHR30086:SF12 3 194 5.2E-103 T 26-04-2016 PAM18_RS14055 7cb68b8b3fcef6c4441aa62b054f5779 205 Pfam PF01810 LysE type translocator 17 192 2.0E-17 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS14055 7cb68b8b3fcef6c4441aa62b054f5779 205 PANTHER PTHR30086 3 194 5.2E-103 T 26-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PAM18_RS25525 e4653b518844416529f3665cff0f5ddb 114 Pfam PF04355 SmpA / OmlA family 31 97 3.9E-14 T 26-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PAM18_RS16025 3302afb02dbec97f35b08d36576cfba3 408 Pfam PF10783 Protein of unknown function (DUF2599) 302 407 2.6E-27 T 26-04-2016 IPR019719 Protein of unknown function DUF2599 PAM18_RS13570 7ecb6f7ff605cb86a9ce24a6b37cda65 179 PIRSF PIRSF029505 1 179 1.1E-95 T 26-04-2016 IPR016922 Uncharacterised conserved protein UCP029505 PAM18_RS06045 3d5e9d4ff5ce9885d86523dd91e405ba 64 PANTHER PTHR35175:SF2 2 61 1.1E-19 T 26-04-2016 PAM18_RS06045 3d5e9d4ff5ce9885d86523dd91e405ba 64 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 8.7E-19 T 26-04-2016 IPR010710 Protein of unknown function DUF1289 PAM18_RS06045 3d5e9d4ff5ce9885d86523dd91e405ba 64 PANTHER PTHR35175 2 61 1.1E-19 T 26-04-2016 PAM18_RS06435 702fd78be84c2dfab94cdcdec1761ad4 226 Pfam PF13852 Protein of unknown function (DUF4197) 25 223 4.9E-77 T 26-04-2016 IPR025245 Protein of unknown function DUF4197 PAM18_RS08765 dfc188dcd5f67dd19f606c38b4ce5e04 143 Pfam PF06803 Protein of unknown function (DUF1232) 67 102 1.7E-13 T 26-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 PAM18_RS21370 e08d9e019c9cea14e08abab0950cb854 167 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 86 143 3.9E-21 T 26-04-2016 IPR018637 Domain of unknown function DUF2059 PAM18_RS25965 cc866fe65fa1061d858995d9e75518ec 178 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 5 166 1.6E-29 T 26-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase PAM18_RS05355 230fff9e3db6297da186d2922417e459 81 Pfam PF10688 Bacterial inner membrane protein 3 73 2.9E-5 T 26-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV PAM18_RS10055 24fe2738c3c00c454335d09e9c2a38d5 209 Pfam PF10972 Peptidoglycan-binding protein, CsiV 61 173 7.3E-19 T 26-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV PAM18_RS26425 3974c7774f7d6094cb9f4a803c30daf9 231 Pfam PF05036 Sporulation related domain 152 222 3.2E-16 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS26425 3974c7774f7d6094cb9f4a803c30daf9 231 Gene3D G3DSA:3.30.70.1070 150 225 1.1E-22 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS26425 3974c7774f7d6094cb9f4a803c30daf9 231 SUPERFAMILY SSF110997 152 225 3.14E-17 T 26-04-2016 IPR007730 Sporulation-related domain GO:0042834 PAM18_RS20710 77366ff9cbc4a5ee0aade4d25cefa41b 125 Gene3D G3DSA:1.20.120.160 8 114 1.4E-16 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20710 77366ff9cbc4a5ee0aade4d25cefa41b 125 Pfam PF01627 Hpt domain 33 98 2.5E-12 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS20710 77366ff9cbc4a5ee0aade4d25cefa41b 125 SUPERFAMILY SSF47226 13 95 3.53E-16 T 26-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 PAM18_RS25090 bf11f888dbb4131fa6dd085ca86aed0e 206 Pfam PF13590 Domain of unknown function (DUF4136) 56 205 1.2E-18 T 26-04-2016 IPR025411 Domain of unknown function DUF4136 PAM18_RS02865 3847eba0a023d26aed7a4833affc60bb 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 26-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PAM18_RS02865 3847eba0a023d26aed7a4833affc60bb 52 PANTHER PTHR21659 1 52 1.9E-23 T 26-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PAM18_RS02865 3847eba0a023d26aed7a4833affc60bb 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 2.5E-22 T 26-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 PAM18_RS17545 a7d5be39d68bf199a53676badec39e21 268 Pfam PF16234 Domain of unknown function (DUF4892) 20 201 6.3E-97 T 26-04-2016 IPR032608 Protein of unknown function DUF4892 PAM18_RS10740 bacbbeca6f4aefa0046290419110b7bc 162 SUPERFAMILY SSF56524 40 161 3.27E-18 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS10740 bacbbeca6f4aefa0046290419110b7bc 162 Pfam PF00174 Oxidoreductase molybdopterin binding domain 65 136 2.4E-5 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS10740 bacbbeca6f4aefa0046290419110b7bc 162 Gene3D G3DSA:3.90.420.10 37 126 7.7E-7 T 26-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 PAM18_RS15450 39d3e4dcd5d139e476a4314f1431acec 84 Pfam PF06568 Domain of unknown function (DUF1127) 30 66 2.6E-7 T 26-04-2016 IPR009506 Protein of unknown function DUF1127 PAM18_RS04580 bf1acb9e66c69d9c0c711d4f67be99f6 335 Pfam PF14238 Domain of unknown function (DUF4340) 70 249 4.0E-13 T 26-04-2016 IPR025641 Domain of unknown function DUF4340 PAM18_RS09545 92beee7600ae1b6dd88f7064a0bb8e05 235 Pfam PF11356 Type II secretion system protein C 36 164 8.4E-22 T 26-04-2016 IPR024961 Type II secretion system protein C, N-terminal PAM18_RS14890 7aba5e790a21765eecf07d00e13e9b7b 71 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 53 5.0E-7 T 26-04-2016 IPR027379 Cardiolipin synthase N-terminal PAM18_RS25515 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 65 97 6.7E-20 T 26-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat PAM18_RS25515 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 23 55 1.1E-19 T 26-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat PAM18_RS25515 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 105 137 7.9E-20 T 26-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat PAM18_RS22450 4f04c44d66a718dbb743dc4d99feeb43 394 Pfam PF16968 Pilus assembly protein TadZ N-terminal 1 133 4.1E-87 T 26-04-2016 IPR031580 Pilus assembly protein TadZ, N-terminal PAM18_RS22450 4f04c44d66a718dbb743dc4d99feeb43 394 Gene3D G3DSA:3.40.50.300 150 372 2.5E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22450 4f04c44d66a718dbb743dc4d99feeb43 394 SUPERFAMILY SSF52540 150 372 7.54E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAM18_RS22900 b0e31623f95fd782f3eedcbc86bf65e1 333 Pfam PF04338 Protein of unknown function, DUF481 126 333 2.2E-47 T 26-04-2016 IPR007433 Protein of unknown function DUF481 PAM18_RS28550 223d1466c3282f6bacefbab75ca67cc9 652 Pfam PF13387 Domain of unknown function (DUF4105) 271 441 2.6E-29 T 26-04-2016 IPR025178 Domain of unknown function DUF4105 PAM18_RS27105 fe30c157ead0170567a83653e93f6ef7 71 Pfam PF02599 Global regulator protein family 4 67 1.9E-10 T 26-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 PAM18_RS27105 fe30c157ead0170567a83653e93f6ef7 71 SUPERFAMILY SSF117130 3 67 1.2E-8 T 26-04-2016 PAM18_RS16955 46c567803c31cc2c3c1f803893574d54 332 SUPERFAMILY SSF63829 39 302 3.99E-28 T 26-04-2016 PAM18_RS16955 46c567803c31cc2c3c1f803893574d54 332 Gene3D G3DSA:2.120.10.30 39 301 4.5E-22 T 26-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like PAM18_RS15920 5766fa943bb769eaf90dd35a5dad693d 126 Gene3D G3DSA:2.60.40.1240 51 111 4.0E-4 T 26-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain PAM18_RS15920 5766fa943bb769eaf90dd35a5dad693d 126 Pfam PF14263 Domain of unknown function (DUF4354) 1 123 3.1E-47 T 26-04-2016 IPR025581 Protein of unknown function DUF4354 PAM18_RS02890 eb5fee65bd1c53162086e667f9e2a842 908 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 444 801 4.6E-16 T 26-04-2016 IPR031161 Peptidase family M60 domain PAM18_RS02890 eb5fee65bd1c53162086e667f9e2a842 908 SMART SM01276 435 780 1.5E-8 T 26-04-2016 IPR031161 Peptidase family M60 domain PAM18_RS03140 df948fe8c2380d7e6b201e4b16bcaf51 115 Pfam PF16459 Phage tail assembly chaperone, TAC 5 107 2.8E-24 T 26-04-2016 IPR024410 Phage tail assembly chaperone protein, TAC PAM18_RS21635 31c27ec9b9bf74a167e307e8dc347578 98 Pfam PF12365 Protein of unknown function (DUF3649) 64 90 3.0E-7 T 26-04-2016 IPR022109 Protein of unknown function DUF3649 PAM18_RS28540 d8f3ada318e929f343fb5898e9805ced 97 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 97 1.0E-38 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS28540 d8f3ada318e929f343fb5898e9805ced 97 Pfam PF09498 Protein of unknown function (DUF2388) 28 96 3.7E-31 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS09860 647f0be76057b411ed207e60bbe866f0 126 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 14 123 2.0E-19 T 26-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PAM18_RS27720 195e112a0919ac55fe2a7536e144198a 114 PIRSF PIRSF025560 2 114 4.6E-31 T 26-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 PAM18_RS27720 195e112a0919ac55fe2a7536e144198a 114 Pfam PF07027 Protein of unknown function (DUF1318) 28 114 2.3E-26 T 26-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 PAM18_RS21085 7b990c623271fe88bc68bdf8427cc535 91 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 89 2.2E-26 T 26-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 PAM18_RS27100 aa56492661e7381a10e983f3c8c10a63 135 Pfam PF13488 Glycine zipper 77 119 5.1E-5 T 26-04-2016 PAM18_RS02310 3b5bf35e0f7166c3eff5af520b3e8176 124 Pfam PF06803 Protein of unknown function (DUF1232) 34 70 3.3E-13 T 26-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 PAM18_RS16695 eb6567eb39ad82852a59c41c0c4e88f7 445 Pfam PF01145 SPFH domain / Band 7 family 35 289 2.1E-38 T 26-04-2016 IPR001107 Band 7 domain PAM18_RS28880 05e9626ce210e91592e8cbccb8a15c3a 585 PANTHER PTHR16254 5 389 5.4E-110 T 26-04-2016 PAM18_RS28880 05e9626ce210e91592e8cbccb8a15c3a 585 PANTHER PTHR16254 557 575 5.4E-110 T 26-04-2016 PAM18_RS28880 05e9626ce210e91592e8cbccb8a15c3a 585 Pfam PF00999 Sodium/hydrogen exchanger family 12 376 8.9E-64 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PAM18_RS12460 0dfd468381ee84192170163a825ddd44 70 Pfam PF13986 Domain of unknown function (DUF4224) 6 45 7.7E-16 T 26-04-2016 IPR025319 Domain of unknown function DUF4224 PAM18_RS05005 2344a04c7627a15d4c420bb808bc89cd 218 Pfam PF06790 Uncharacterised protein family (UPF0259) 66 208 5.8E-7 T 26-04-2016 IPR009627 Uncharacterised protein family UPF0259 PAM18_RS09810 990692e884e9d8754661023ea6a61bae 73 Pfam PF11197 Protein of unknown function (DUF2835) 5 71 8.8E-26 T 26-04-2016 IPR021363 Protein of unknown function DUF2835 PAM18_RS11340 51e6cc16fb8a0106e70b7b6e783d5498 425 Gene3D G3DSA:2.40.160.10 33 425 7.3E-134 T 26-04-2016 IPR023614 Porin domain PAM18_RS11340 51e6cc16fb8a0106e70b7b6e783d5498 425 PANTHER PTHR34596 1 425 7.0E-157 T 26-04-2016 PAM18_RS11340 51e6cc16fb8a0106e70b7b6e783d5498 425 Pfam PF03573 outer membrane porin, OprD family 28 423 3.0E-141 T 26-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 PAM18_RS17910 ccf0fd169d0aa1460ba920d4023ea1d5 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 5 45 4.1E-9 T 26-04-2016 IPR008621 Cbb3-type cytochrome oxidase component PAM18_RS21435 5da9e8a0dc7c8b9a03f91b4a273db8a5 207 TIGRFAM TIGR03398 plc_access_R: phospholipase C accessory protein PlcR 66 205 1.5E-61 T 26-04-2016 IPR017769 Phospholipase C accessory protein PlcR PAM18_RS28905 801bb076b6dcfd65a5d904ddf418786c 213 Pfam PF08856 Protein of unknown function (DUF1826) 17 210 5.1E-65 T 26-04-2016 IPR014955 Protein of unknown function DUF1826 PAM18_RS11440 86c16257453cb7f1c98f45481c39796e 95 Pfam PF12021 Protein of unknown function (DUF3509) 4 87 2.3E-32 T 26-04-2016 IPR021898 Protein of unknown function DUF3509 PAM18_RS28535 f3e4ed4e8cce02ff4386ad2a7da049fb 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 104 2.5E-42 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS28535 f3e4ed4e8cce02ff4386ad2a7da049fb 105 Pfam PF09498 Protein of unknown function (DUF2388) 37 104 6.3E-32 T 26-04-2016 IPR012661 Conserved hypothetical protein CHP02448 PAM18_RS03110 98b81313fd8b910f6bafccfe3cbc1a83 115 Pfam PF16085 Bacteriophage holin Hol, superfamily III 1 111 8.3E-60 T 26-04-2016 IPR032128 Pyocin R2, holin PAM18_RS12780 cf824ca01cc5e5cc6d6b1754b1d7d7cc 180 Pfam PF16304 Domain of unknown function (DUF4946) 26 179 5.1E-63 T 26-04-2016 IPR032543 Protein of unknown function DUF4946 PAM18_RS17925 96432ae5ac6425755c608d6b69f709f6 179 Pfam PF05751 FixH 12 155 2.7E-39 T 26-04-2016 IPR008620 Nitrogen fixation protein FixH PAM18_RS22260 b76f137af15d8370221006de075f2948 143 Pfam PF11356 Type II secretion system protein C 56 124 4.4E-8 T 26-04-2016 IPR024961 Type II secretion system protein C, N-terminal PAM18_RS21310 11ea892646418828f5751d37ba9fc154 127 SUPERFAMILY SSF141488 43 117 1.83E-20 T 26-04-2016 IPR018660 C-type lysozyme, inhibitor PAM18_RS21310 11ea892646418828f5751d37ba9fc154 127 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 49 115 4.9E-21 T 26-04-2016 IPR018660 C-type lysozyme, inhibitor PAM18_RS17470 2228e6710a81ac271c308b098217ecf0 201 Pfam PF16233 Domain of unknown function (DUF4893) 67 176 8.7E-22 T 26-04-2016 IPR032609 Protein of unknown function DUF4893 PAM18_RS17950 fd5530b2e126c18fbde0ace121bac19f 155 Gene3D G3DSA:1.20.1270.10 83 126 2.3E-4 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain PAM18_RS02895 c87c0814a7b982f084800c37ef81932b 123 Pfam PF08378 Nuclease-related domain 33 90 4.6E-10 T 26-04-2016 IPR011528 Nuclease-related domain, NERD PAM18_RS14750 269e672960f5235c91706f812f6a89d4 121 Pfam PF12021 Protein of unknown function (DUF3509) 10 78 4.4E-14 T 26-04-2016 IPR021898 Protein of unknown function DUF3509 PAM18_RS08535 e9476dd620fab16eaabab386c6f9d741 67 Pfam PF07869 Protein of unknown function (DUF1656) 6 59 2.3E-20 T 26-04-2016 IPR012451 Protein of unknown function DUF1656 PAM18_RS08595 6ed13f4d7199b0b52297dc7ae580e0f7 271 Pfam PF13503 Domain of unknown function (DUF4123) 28 148 2.1E-18 T 26-04-2016 IPR025391 Domain of unknown function DUF4123 PAM18_RS00560 da2683b0c63eb31e93781a3467b2d822 260 Pfam PF02104 SURF1 family 36 233 5.9E-29 T 26-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 PAM18_RS06845 67c1afc194d22672fcf81a8141717f11 123 Pfam PF16786 Recombination enhancement, RecA-dependent nuclease 7 101 4.5E-26 T 26-04-2016 IPR031875 Recombination enhancement, RecA-dependent nuclease PAM18_RS16360 fd60b28a9dfa77b868f24e32cba3ddb4 80 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 7.1E-29 T 26-04-2016 IPR010696 Protein of unknown function DUF1272 PAM18_RS16130 d8b431abd8abc0c3fef4a407724ee4c3 207 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 110 196 4.1E-10 T 26-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 PAM18_RS20890 af51d77bcea63644a2cf41d388c39dc6 345 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 20 247 6.8E-68 T 26-04-2016 IPR018642 Protein of unknown function DUF2066 PAM18_RS13485 44c2065a4656b0cc159773721e842603 306 Pfam PF13557 Putative MetA-pathway of phenol degradation 57 302 4.5E-61 T 26-04-2016 IPR025737 MetA-pathway of phenol degradation, putative PAM18_RS17180 02734d2ac248e3b73a7038c3b9e7a3ce 132 Pfam PF02120 Flagellar hook-length control protein FliK 36 117 1.2E-9 T 26-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal PAM18_RS17180 02734d2ac248e3b73a7038c3b9e7a3ce 132 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 3 132 1.6E-47 T 26-04-2016 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 PAM18_RS11405 ff8d0b21a6f315c927d8e971b5fc7644 77 Pfam PF12021 Protein of unknown function (DUF3509) 7 68 5.2E-12 T 26-04-2016 IPR021898 Protein of unknown function DUF3509 PAM18_RS10300 73db1db17e6ca787da4aa5206fb31367 210 Pfam PF16105 Domain of unknown function (DUF4823) 52 199 2.9E-58 T 26-04-2016 IPR032248 Protein of unknown function DUF4823 PAM18_RS08030 2ef33bb259949c4c2330d7a10c9c058b 95 Pfam PF12021 Protein of unknown function (DUF3509) 7 88 9.2E-28 T 26-04-2016 IPR021898 Protein of unknown function DUF3509 PAM18_RS25265 ea6c9bf23e68b348a02456554e545fd6 258 PIRSF PIRSF029691 1 258 3.1E-116 T 26-04-2016 IPR016934 Uncharacterised conserved protein UCP029691 PAM18_RS09670 cad1e9b779a16bfa9c76272bc117c8c0 654 Pfam PF06980 Protein of unknown function (DUF1302) 40 654 2.9E-182 T 26-04-2016 IPR010727 Protein of unknown function DUF1302 PAM18_RS04470 2b94d273e33fb860a278781abe60bd41 194 Pfam PF10986 Protein of unknown function (DUF2796) 31 189 8.9E-55 T 26-04-2016 IPR021253 Protein of unknown function DUF2796 PAM18_RS20430 91629e77563827d708fc51c94f9cb792 154 Pfam PF05425 Copper resistance protein D 48 150 4.3E-19 T 26-04-2016 IPR008457 Copper resistance protein D GO:0016021 PAM18_RS25250 a6fdb5598783b2b81f183f7508b139ac 122 Pfam PF10686 Protein of unknown function (DUF2493) 1 61 7.4E-7 T 26-04-2016 IPR019627 Mycobacteriophage D29, Gp61 PAM18_RS25100 2ef9a418e728003f2f9b2f39578f9177 187 Pfam PF13590 Domain of unknown function (DUF4136) 25 186 1.1E-29 T 26-04-2016 IPR025411 Domain of unknown function DUF4136 PAM18_RS11880 2a7cbc19f7b34de80cfb2c1ba3d3b21e 88 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 67 2.0E-17 T 26-04-2016