locus-tag class description JJQ57_RS00005 PF00308 Bacterial dnaA protein JJQ57_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JJQ57_RS00005 PF11638 DnaA N-terminal domain JJQ57_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JJQ57_RS00010 PF02767 DNA polymerase III beta subunit, central domain JJQ57_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JJQ57_RS00015 PF02463 RecF/RecN/SMC N terminal domain JJQ57_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JJQ57_RS00020 PF00204 DNA gyrase B JJQ57_RS00020 PF18053 DNA gyrase B subunit insert domain JJQ57_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS00020 PF01751 Toprim domain JJQ57_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit JJQ57_RS00040 PF05746 DALR anticodon binding domain JJQ57_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit JJQ57_RS00050 PF03352 Methyladenine glycosylase JJQ57_RS00065 PF02592 Putative vitamin uptake transporter JJQ57_RS00080 PF02080 TrkA-C domain JJQ57_RS00080 PF02254 TrkA-N domain JJQ57_RS00085 PF01029 NusB family JJQ57_RS00085 PF01189 16S rRNA methyltransferase RsmB/F JJQ57_RS00090 PF00551 Formyl transferase JJQ57_RS00090 PF02911 Formyl transferase, C-terminal domain JJQ57_RS00095 PF01327 Polypeptide deformylase JJQ57_RS00100 PF01476 LysM domain JJQ57_RS00105 PF17782 DprA winged helix domain JJQ57_RS00105 PF02481 DNA recombination-mediator protein A JJQ57_RS00110 PF01300 Telomere recombination JJQ57_RS00115 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS00115 PF00107 Zinc-binding dehydrogenase JJQ57_RS00120 PF01218 Coproporphyrinogen III oxidase JJQ57_RS00125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JJQ57_RS00125 PF01488 Shikimate / quinate 5-dehydrogenase JJQ57_RS00125 PF08501 Shikimate dehydrogenase substrate binding domain JJQ57_RS00150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS00155 PF00884 Sulfatase JJQ57_RS00155 PF12411 Choline sulfatase enzyme C terminal JJQ57_RS00160 PF03466 LysR substrate binding domain JJQ57_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00175 PF00072 Response regulator receiver domain JJQ57_RS00175 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS00180 PF00290 Tryptophan synthase alpha chain JJQ57_RS00185 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS00190 PF03466 LysR substrate binding domain JJQ57_RS00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00195 PF07311 Dodecin JJQ57_RS00205 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ57_RS00205 PF17287 POTRA domain JJQ57_RS00205 PF08479 POTRA domain, ShlB-type JJQ57_RS00210 PF13332 Hemagglutinin repeat JJQ57_RS00210 PF13018 Extended Signal Peptide of Type V secretion system JJQ57_RS00210 PF13332 Hemagglutinin repeat JJQ57_RS00210 PF05860 haemagglutination activity domain JJQ57_RS00210 PF04829 Pre-toxin domain with VENN motif JJQ57_RS00210 PF13018 Extended Signal Peptide of Type V secretion system JJQ57_RS00210 PF04829 Pre-toxin domain with VENN motif JJQ57_RS00210 PF05860 haemagglutination activity domain JJQ57_RS00225 PF13332 Hemagglutinin repeat JJQ57_RS00225 PF05594 Haemagluttinin repeat JJQ57_RS00225 PF04829 Pre-toxin domain with VENN motif JJQ57_RS00225 PF14436 Bacterial EndoU nuclease JJQ57_RS00225 PF05860 haemagglutination activity domain JJQ57_RS00245 PF13194 Domain of unknown function (DUF4010) JJQ57_RS00250 PF03496 ADP-ribosyltransferase exoenzyme JJQ57_RS00250 PF03545 Yersinia virulence determinant (YopE) JJQ57_RS00255 PF03783 Curli production assembly/transport component CsgG JJQ57_RS00265 PF05643 Putative bacterial lipoprotein (DUF799) JJQ57_RS00290 PF00733 Asparagine synthase JJQ57_RS00290 PF13537 Glutamine amidotransferase domain JJQ57_RS00300 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JJQ57_RS00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00310 PF03466 LysR substrate binding domain JJQ57_RS00325 PF02566 OsmC-like protein JJQ57_RS00330 PF06649 Protein of unknown function (DUF1161) JJQ57_RS00355 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS00360 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS00365 PF01432 Peptidase family M3 JJQ57_RS00370 PF09526 Probable metal-binding protein (DUF2387) JJQ57_RS00375 PF04055 Radical SAM superfamily JJQ57_RS00385 PF03781 Sulfatase-modifying factor enzyme 1 JJQ57_RS00395 PF12704 MacB-like periplasmic core domain JJQ57_RS00395 PF02687 FtsX-like permease family JJQ57_RS00395 PF00005 ABC transporter JJQ57_RS00400 PF03793 PASTA domain JJQ57_RS00400 PF00069 Protein kinase domain JJQ57_RS00415 PF06761 Intracellular multiplication and human macrophage-killing JJQ57_RS00415 PF06744 Type VI secretion protein IcmF C-terminal JJQ57_RS00415 PF14331 ImcF-related N-terminal domain JJQ57_RS00420 PF00691 OmpA family JJQ57_RS00420 PF13677 Membrane MotB of proton-channel complex MotA/MotB JJQ57_RS00425 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JJQ57_RS00440 PF06812 ImpA, N-terminal, type VI secretion system JJQ57_RS00445 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JJQ57_RS00450 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JJQ57_RS00455 PF05638 Type VI secretion system effector, Hcp JJQ57_RS00460 PF07024 ImpE protein JJQ57_RS00465 PF04965 Gene 25-like lysozyme JJQ57_RS00470 PF05947 Type VI secretion system, TssF JJQ57_RS00480 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS00480 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS00480 PF17871 AAA lid domain JJQ57_RS00480 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS00485 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS00490 PF18660 Tsi6 JJQ57_RS00500 PF05488 PAAR motif JJQ57_RS00505 PF08786 DcrB JJQ57_RS00510 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS00510 PF06715 Gp5 C-terminal repeat (3 copies) JJQ57_RS00530 PF13665 Domain of unknown function (DUF4150) JJQ57_RS00530 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JJQ57_RS00545 PF00484 Carbonic anhydrase JJQ57_RS00550 PF00916 Sulfate permease family JJQ57_RS00550 PF01740 STAS domain JJQ57_RS00560 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JJQ57_RS00560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JJQ57_RS00565 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS00570 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JJQ57_RS00575 PF00510 Cytochrome c oxidase subunit III JJQ57_RS00600 PF01040 UbiA prenyltransferase family JJQ57_RS00605 PF02630 SCO1/SenC JJQ57_RS00610 PF13673 Acetyltransferase (GNAT) domain JJQ57_RS00615 PF01638 HxlR-like helix-turn-helix JJQ57_RS00625 PF01323 DSBA-like thioredoxin domain JJQ57_RS00630 PF00375 Sodium:dicarboxylate symporter family JJQ57_RS00635 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS00635 PF07729 FCD domain JJQ57_RS00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00650 PF03466 LysR substrate binding domain JJQ57_RS00675 PF03831 PhnA domain JJQ57_RS00675 PF08274 PhnA Zinc-Ribbon JJQ57_RS00680 PF00324 Amino acid permease JJQ57_RS00685 PF00171 Aldehyde dehydrogenase family JJQ57_RS00690 PF07883 Cupin domain JJQ57_RS00695 PF00202 Aminotransferase class-III JJQ57_RS00700 PF03466 LysR substrate binding domain JJQ57_RS00700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00705 PF01979 Amidohydrolase family JJQ57_RS00710 PF00005 ABC transporter JJQ57_RS00715 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS00720 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS00725 PF00578 AhpC/TSA family JJQ57_RS00725 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ57_RS00730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS00730 PF13192 Thioredoxin domain JJQ57_RS00735 PF03976 Polyphosphate kinase 2 (PPK2) JJQ57_RS00740 PF01979 Amidohydrolase family JJQ57_RS00745 PF01156 Inosine-uridine preferring nucleoside hydrolase JJQ57_RS00750 PF03502 Nucleoside-specific channel-forming protein, Tsx JJQ57_RS00765 PF02608 ABC transporter substrate-binding protein PnrA-like JJQ57_RS00770 PF03171 2OG-Fe(II) oxygenase superfamily JJQ57_RS00770 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JJQ57_RS00775 PF00962 Adenosine/AMP deaminase JJQ57_RS00790 PF00593 TonB dependent receptor JJQ57_RS00790 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00795 PF03466 LysR substrate binding domain JJQ57_RS00800 PF00775 Dioxygenase JJQ57_RS00800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JJQ57_RS00805 PF00775 Dioxygenase JJQ57_RS00810 PF01614 Bacterial transcriptional regulator JJQ57_RS00810 PF09339 IclR helix-turn-helix domain JJQ57_RS00815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS00825 PF00873 AcrB/AcrD/AcrF family JJQ57_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00830 PF03466 LysR substrate binding domain JJQ57_RS00840 PF03573 outer membrane porin, OprD family JJQ57_RS00865 PF00860 Permease family JJQ57_RS00870 PF08362 YcdC-like protein, C-terminal region JJQ57_RS00870 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS00875 PF01205 Uncharacterized protein family UPF0029 JJQ57_RS00880 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS00885 PF09345 Domain of unknown function (DUF1987) JJQ57_RS00900 PF00072 Response regulator receiver domain JJQ57_RS00900 PF01339 CheB methylesterase JJQ57_RS00905 PF03975 CheD chemotactic sensory transduction JJQ57_RS00910 PF03705 CheR methyltransferase, all-alpha domain JJQ57_RS00910 PF01739 CheR methyltransferase, SAM binding domain JJQ57_RS00915 PF00672 HAMP domain JJQ57_RS00915 PF02203 Tar ligand binding domain homologue JJQ57_RS00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS00920 PF01584 CheW-like domain JJQ57_RS00925 PF01627 Hpt domain JJQ57_RS00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS00925 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ57_RS00925 PF09078 CheY binding JJQ57_RS00925 PF01584 CheW-like domain JJQ57_RS00930 PF00072 Response regulator receiver domain JJQ57_RS00935 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS00935 PF00672 HAMP domain JJQ57_RS00935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00940 PF03466 LysR substrate binding domain JJQ57_RS00950 PF00884 Sulfatase JJQ57_RS00955 PF00005 ABC transporter JJQ57_RS00960 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS00965 PF09084 NMT1/THI5 like JJQ57_RS00980 PF03573 outer membrane porin, OprD family JJQ57_RS00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS00990 PF03466 LysR substrate binding domain JJQ57_RS00995 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS00995 PF00593 TonB dependent receptor JJQ57_RS01000 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ57_RS01005 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ57_RS01010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJQ57_RS01010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JJQ57_RS01015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JJQ57_RS01020 PF02233 NAD(P) transhydrogenase beta subunit JJQ57_RS01025 PF03544 Gram-negative bacterial TonB protein C-terminal JJQ57_RS01030 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS01035 PF02472 Biopolymer transport protein ExbD/TolR JJQ57_RS01050 PF16957 Malonate decarboxylase, alpha subunit, transporter JJQ57_RS01055 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JJQ57_RS01060 PF06857 Malonate decarboxylase delta subunit (MdcD) JJQ57_RS01065 PF01039 Carboxyl transferase domain JJQ57_RS01075 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JJQ57_RS01080 PF00698 Acyl transferase domain JJQ57_RS01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS01095 PF03466 LysR substrate binding domain JJQ57_RS01105 PF00171 Aldehyde dehydrogenase family JJQ57_RS01110 PF00324 Amino acid permease JJQ57_RS01115 PF00202 Aminotransferase class-III JJQ57_RS01125 PF00701 Dihydrodipicolinate synthetase family JJQ57_RS01130 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ57_RS01135 PF01381 Helix-turn-helix JJQ57_RS01135 PF08671 Anti-repressor SinI JJQ57_RS01140 PF01144 Coenzyme A transferase JJQ57_RS01145 PF01144 Coenzyme A transferase JJQ57_RS01150 PF00108 Thiolase, N-terminal domain JJQ57_RS01150 PF02803 Thiolase, C-terminal domain JJQ57_RS01155 PF00083 Sugar (and other) transporter JJQ57_RS01160 PF00206 Lyase JJQ57_RS01160 PF10397 Adenylosuccinate lyase C-terminus JJQ57_RS01165 PF12146 Serine aminopeptidase, S33 JJQ57_RS01170 PF02627 Carboxymuconolactone decarboxylase family JJQ57_RS01175 PF03466 LysR substrate binding domain JJQ57_RS01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS01185 PF07690 Major Facilitator Superfamily JJQ57_RS01195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ57_RS01195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ57_RS01210 PF03573 outer membrane porin, OprD family JJQ57_RS01215 PF07690 Major Facilitator Superfamily JJQ57_RS01220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS01220 PF01261 Xylose isomerase-like TIM barrel JJQ57_RS01225 PF17938 Tetracyclin repressor-like, C-terminal domain JJQ57_RS01225 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS01230 PF08501 Shikimate dehydrogenase substrate binding domain JJQ57_RS01230 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JJQ57_RS01235 PF01220 Dehydroquinase class II JJQ57_RS01240 PF07690 Major Facilitator Superfamily JJQ57_RS01245 PF01494 FAD binding domain JJQ57_RS01260 PF00571 CBS domain JJQ57_RS01260 PF03448 MgtE intracellular N domain JJQ57_RS01260 PF01769 Divalent cation transporter JJQ57_RS01275 PF01047 MarR family JJQ57_RS01280 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JJQ57_RS01285 PF06912 Protein of unknown function (DUF1275) JJQ57_RS01325 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JJQ57_RS01325 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS01325 PF13296 Putative type VI secretion system Rhs element Vgr JJQ57_RS01330 PF05638 Type VI secretion system effector, Hcp JJQ57_RS01340 PF00171 Aldehyde dehydrogenase family JJQ57_RS01345 PF00202 Aminotransferase class-III JJQ57_RS01350 PF00072 Response regulator receiver domain JJQ57_RS01355 PF00155 Aminotransferase class I and II JJQ57_RS01355 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS01360 PF02627 Carboxymuconolactone decarboxylase family JJQ57_RS01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS01375 PF03466 LysR substrate binding domain JJQ57_RS01380 PF07690 Major Facilitator Superfamily JJQ57_RS01400 PF01435 Peptidase family M48 JJQ57_RS01415 PF12857 TOBE-like domain JJQ57_RS01415 PF00005 ABC transporter JJQ57_RS01420 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01440 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS01440 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS01440 PF00563 EAL domain JJQ57_RS01455 PF00491 Arginase family JJQ57_RS01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS01460 PF03466 LysR substrate binding domain JJQ57_RS01465 PF08448 PAS fold JJQ57_RS01465 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS01470 PF03573 outer membrane porin, OprD family JJQ57_RS01475 PF04371 Porphyromonas-type peptidyl-arginine deiminase JJQ57_RS01490 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS01495 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS01500 PF07722 Peptidase C26 JJQ57_RS01505 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS01510 PF00202 Aminotransferase class-III JJQ57_RS01515 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS01520 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS01525 PF08402 TOBE domain JJQ57_RS01525 PF00005 ABC transporter JJQ57_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01540 PF01804 Penicillin amidase JJQ57_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01590 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS01600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS01600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS01605 PF02913 FAD linked oxidases, C-terminal domain JJQ57_RS01605 PF01565 FAD binding domain JJQ57_RS01610 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS01620 PF04076 Bacterial OB fold (BOF) protein JJQ57_RS01625 PF00850 Histone deacetylase domain JJQ57_RS01630 PF00324 Amino acid permease JJQ57_RS01635 PF01547 Bacterial extracellular solute-binding protein JJQ57_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01645 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS01650 PF00005 ABC transporter JJQ57_RS01650 PF08402 TOBE domain JJQ57_RS01655 PF06977 SdiA-regulated JJQ57_RS01660 PF04389 Peptidase family M28 JJQ57_RS01665 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS01670 PF07411 Domain of unknown function (DUF1508) JJQ57_RS01675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JJQ57_RS01680 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS01680 PF00585 C-terminal regulatory domain of Threonine dehydratase JJQ57_RS01690 PF11066 Protein of unknown function (DUF2867) JJQ57_RS01690 PF13460 NAD(P)H-binding JJQ57_RS01710 PF00293 NUDIX domain JJQ57_RS01715 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ57_RS01715 PF05524 PEP-utilising enzyme, N-terminal JJQ57_RS01715 PF00391 PEP-utilising enzyme, mobile domain JJQ57_RS01715 PF01590 GAF domain JJQ57_RS01720 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS01730 PF01925 Sulfite exporter TauE/SafE JJQ57_RS01735 PF01790 Prolipoprotein diacylglyceryl transferase JJQ57_RS01740 PF00303 Thymidylate synthase JJQ57_RS01765 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ57_RS01780 PF00186 Dihydrofolate reductase JJQ57_RS01785 PF12850 Calcineurin-like phosphoesterase superfamily domain JJQ57_RS01790 PF00860 Permease family JJQ57_RS01795 PF00920 Dehydratase family JJQ57_RS01800 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ57_RS01800 PF17785 PUA-like domain JJQ57_RS01805 PF01965 DJ-1/PfpI family JJQ57_RS01815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JJQ57_RS01815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JJQ57_RS01815 PF06827 Zinc finger found in FPG and IleRS JJQ57_RS01845 PF00037 4Fe-4S binding domain JJQ57_RS01850 PF01467 Cytidylyltransferase-like JJQ57_RS01855 PF05199 GMC oxidoreductase JJQ57_RS01855 PF00732 GMC oxidoreductase JJQ57_RS01865 PF00171 Aldehyde dehydrogenase family JJQ57_RS01870 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS01880 PF00561 alpha/beta hydrolase fold JJQ57_RS01895 PF05193 Peptidase M16 inactive domain JJQ57_RS01900 PF05193 Peptidase M16 inactive domain JJQ57_RS01900 PF00675 Insulinase (Peptidase family M16) JJQ57_RS01905 PF02881 SRP54-type protein, helical bundle domain JJQ57_RS01905 PF00448 SRP54-type protein, GTPase domain JJQ57_RS01910 PF00005 ABC transporter JJQ57_RS01915 PF18075 FtsX extracellular domain JJQ57_RS01920 PF04545 Sigma-70, region 4 JJQ57_RS01920 PF04542 Sigma-70 region 2 JJQ57_RS01920 PF00140 Sigma-70 factor, region 1.2 JJQ57_RS01930 PF00912 Transglycosylase JJQ57_RS01935 PF04241 Protein of unknown function (DUF423) JJQ57_RS01940 PF02597 ThiS family JJQ57_RS01940 PF05690 Thiazole biosynthesis protein ThiG JJQ57_RS01945 PF05690 Thiazole biosynthesis protein ThiG JJQ57_RS01950 PF02390 Putative methyltransferase JJQ57_RS01955 PF07044 Protein of unknown function (DUF1329) JJQ57_RS01970 PF06969 HemN C-terminal domain JJQ57_RS01970 PF04055 Radical SAM superfamily JJQ57_RS01975 PF01725 Ham1 family JJQ57_RS01985 PF00561 alpha/beta hydrolase fold JJQ57_RS01985 PF07021 Methionine biosynthesis protein MetW JJQ57_RS01990 PF00561 alpha/beta hydrolase fold JJQ57_RS01995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JJQ57_RS01995 PF01926 50S ribosome-binding GTPase JJQ57_RS02000 PF02594 Uncharacterised ACR, YggU family COG1872 JJQ57_RS02005 PF02325 YGGT family JJQ57_RS02010 PF14748 Pyrroline-5-carboxylate reductase dimerisation JJQ57_RS02010 PF03807 NADP oxidoreductase coenzyme F420-dependent JJQ57_RS02015 PF01168 Alanine racemase, N-terminal domain JJQ57_RS02020 PF00437 Type II/IV secretion system protein JJQ57_RS02025 PF00437 Type II/IV secretion system protein JJQ57_RS02030 PF01545 Cation efflux family JJQ57_RS02040 PF00571 CBS domain JJQ57_RS02040 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS02045 PF01053 Cys/Met metabolism PLP-dependent enzyme JJQ57_RS02050 PF01979 Amidohydrolase family JJQ57_RS02055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ57_RS02055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ57_RS02060 PF00156 Phosphoribosyl transferase domain JJQ57_RS02065 PF03652 Holliday junction resolvase JJQ57_RS02070 PF02622 Uncharacterized ACR, COG1678 JJQ57_RS02080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JJQ57_RS02080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JJQ57_RS02085 PF00072 Response regulator receiver domain JJQ57_RS02090 PF00072 Response regulator receiver domain JJQ57_RS02095 PF01584 CheW-like domain JJQ57_RS02100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JJQ57_RS02100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS02105 PF03705 CheR methyltransferase, all-alpha domain JJQ57_RS02105 PF01739 CheR methyltransferase, SAM binding domain JJQ57_RS02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS02110 PF01627 Hpt domain JJQ57_RS02110 PF00072 Response regulator receiver domain JJQ57_RS02110 PF01584 CheW-like domain JJQ57_RS02110 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ57_RS02115 PF01339 CheB methylesterase JJQ57_RS02130 PF01810 LysE type translocator JJQ57_RS02140 PF04452 RNA methyltransferase JJQ57_RS02145 PF00202 Aminotransferase class-III JJQ57_RS02150 PF01593 Flavin containing amine oxidoreductase JJQ57_RS02155 PF01292 Prokaryotic cytochrome b561 JJQ57_RS02160 PF04264 YceI-like domain JJQ57_RS02165 PF01047 MarR family JJQ57_RS02200 PF00239 Resolvase, N terminal domain JJQ57_RS02200 PF02796 Helix-turn-helix domain of resolvase JJQ57_RS02210 PF12833 Helix-turn-helix domain JJQ57_RS02210 PF07883 Cupin domain JJQ57_RS02215 PF09278 MerR, DNA binding JJQ57_RS02215 PF00376 MerR family regulatory protein JJQ57_RS02220 PF02411 MerT mercuric transport protein JJQ57_RS02225 PF00403 Heavy-metal-associated domain JJQ57_RS02235 PF13700 Domain of unknown function (DUF4158) JJQ57_RS02235 PF01526 Tn3 transposase DDE domain JJQ57_RS02265 PF06224 Winged helix DNA-binding domain JJQ57_RS02285 PF00892 EamA-like transporter family JJQ57_RS02295 PF13185 GAF domain JJQ57_RS02295 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS02330 PF06508 Queuosine biosynthesis protein QueC JJQ57_RS02355 PF13676 TIR domain JJQ57_RS02380 PF04380 Membrane fusogenic activity JJQ57_RS02385 PF00543 Nitrogen regulatory protein P-II JJQ57_RS02390 PF00909 Ammonium Transporter Family JJQ57_RS02395 PF01894 Uncharacterised protein family UPF0047 JJQ57_RS02410 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS02410 PF00155 Aminotransferase class I and II JJQ57_RS02425 PF02899 Phage integrase, N-terminal SAM-like domain JJQ57_RS02425 PF00589 Phage integrase family JJQ57_RS02435 PF01678 Diaminopimelate epimerase JJQ57_RS02440 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJQ57_RS02440 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ57_RS02445 PF13627 Prokaryotic lipoprotein-attachment site JJQ57_RS02450 PF01491 Frataxin-like domain JJQ57_RS02460 PF14760 Rnk N-terminus JJQ57_RS02460 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ57_RS02470 PF12633 Adenylate cyclase NT domain JJQ57_RS02470 PF01295 Adenylate cyclase, class-I JJQ57_RS02490 PF01544 CorA-like Mg2+ transporter protein JJQ57_RS02500 PF05638 Type VI secretion system effector, Hcp JJQ57_RS02505 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS02520 PF00206 Lyase JJQ57_RS02520 PF14698 Argininosuccinate lyase C-terminal JJQ57_RS02525 PF06580 Histidine kinase JJQ57_RS02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS02525 PF07694 5TMR of 5TMR-LYT JJQ57_RS02530 PF04397 LytTr DNA-binding domain JJQ57_RS02530 PF00072 Response regulator receiver domain JJQ57_RS02535 PF03900 Porphobilinogen deaminase, C-terminal domain JJQ57_RS02535 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JJQ57_RS02540 PF02602 Uroporphyrinogen-III synthase HemD JJQ57_RS02555 PF02600 Disulfide bond formation protein DsbB JJQ57_RS02560 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JJQ57_RS02565 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ57_RS02565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS02580 PF12848 ABC transporter JJQ57_RS02580 PF00005 ABC transporter JJQ57_RS02590 PF03741 Integral membrane protein TerC family JJQ57_RS02595 PF01810 LysE type translocator JJQ57_RS02600 PF03239 Iron permease FTR1 family JJQ57_RS02605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JJQ57_RS02610 PF03061 Thioesterase superfamily JJQ57_RS02620 PF09335 SNARE associated Golgi protein JJQ57_RS02625 PF00490 Delta-aminolevulinic acid dehydratase JJQ57_RS02630 PF02503 Polyphosphate kinase middle domain JJQ57_RS02630 PF13090 Polyphosphate kinase C-terminal domain 2 JJQ57_RS02630 PF17941 Polyphosphate kinase C-terminal domain 1 JJQ57_RS02630 PF13089 Polyphosphate kinase N-terminal domain JJQ57_RS02635 PF02541 Ppx/GppA phosphatase family JJQ57_RS02640 PF00085 Thioredoxin JJQ57_RS02645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ57_RS02645 PF07497 Rho termination factor, RNA-binding domain JJQ57_RS02645 PF07498 Rho termination factor, N-terminal domain JJQ57_RS02650 PF01757 Acyltransferase family JJQ57_RS02655 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JJQ57_RS02660 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS02665 PF07690 Major Facilitator Superfamily JJQ57_RS02670 PF14765 Polyketide synthase dehydratase JJQ57_RS02670 PF00550 Phosphopantetheine attachment site JJQ57_RS02670 PF08659 KR domain JJQ57_RS02670 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS02670 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS02670 PF16197 Ketoacyl-synthetase C-terminal extension JJQ57_RS02670 PF08990 Erythronolide synthase docking JJQ57_RS02670 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS02670 PF00698 Acyl transferase domain JJQ57_RS02680 PF13533 Biotin-lipoyl like JJQ57_RS02685 PF00005 ABC transporter JJQ57_RS02700 PF01812 5-formyltetrahydrofolate cyclo-ligase family JJQ57_RS02710 PF05164 Cell division protein ZapA JJQ57_RS02720 PF03695 Uncharacterised protein family (UPF0149) JJQ57_RS02725 PF00557 Metallopeptidase family M24 JJQ57_RS02725 PF05195 Aminopeptidase P, N-terminal domain JJQ57_RS02730 PF01494 FAD binding domain JJQ57_RS02740 PF01494 FAD binding domain JJQ57_RS02755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS02755 PF03466 LysR substrate binding domain JJQ57_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS02770 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ57_RS02770 PF01571 Aminomethyltransferase folate-binding domain JJQ57_RS02775 PF01597 Glycine cleavage H-protein JJQ57_RS02780 PF01212 Beta-eliminating lyase JJQ57_RS02780 PF02347 Glycine cleavage system P-protein JJQ57_RS02795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ57_RS02795 PF00437 Type II/IV secretion system protein JJQ57_RS02800 PF01928 CYTH domain JJQ57_RS02805 PF01865 Protein of unknown function DUF47 JJQ57_RS02810 PF01384 Phosphate transporter family JJQ57_RS02815 PF01546 Peptidase family M20/M25/M40 JJQ57_RS02815 PF07687 Peptidase dimerisation domain JJQ57_RS02820 PF01914 MarC family integral membrane protein JJQ57_RS02825 PF00696 Amino acid kinase family JJQ57_RS02825 PF00583 Acetyltransferase (GNAT) family JJQ57_RS02830 PF04262 Glutamate-cysteine ligase JJQ57_RS02840 PF17674 HHH domain JJQ57_RS02840 PF00575 S1 RNA binding domain JJQ57_RS02840 PF16921 Tex protein YqgF-like domain JJQ57_RS02840 PF09371 Tex-like protein N-terminal domain JJQ57_RS02845 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS02845 PF00072 Response regulator receiver domain JJQ57_RS02850 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS02850 PF00672 HAMP domain JJQ57_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS02855 PF02016 LD-carboxypeptidase N-terminal domain JJQ57_RS02855 PF17676 LD-carboxypeptidase C-terminal domain JJQ57_RS02860 PF18030 RimK PreATP-grasp domain JJQ57_RS02860 PF08443 RimK-like ATP-grasp domain JJQ57_RS02865 PF18030 RimK PreATP-grasp domain JJQ57_RS02865 PF08443 RimK-like ATP-grasp domain JJQ57_RS02870 PF01479 S4 domain JJQ57_RS02880 PF01430 Hsp33 protein JJQ57_RS02885 PF01293 Phosphoenolpyruvate carboxykinase JJQ57_RS02900 PF00881 Nitroreductase family JJQ57_RS02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS02905 PF03466 LysR substrate binding domain JJQ57_RS02910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS02910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS02910 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS02915 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS02915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS02915 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS02915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS02920 PF00465 Iron-containing alcohol dehydrogenase JJQ57_RS02925 PF03061 Thioesterase superfamily JJQ57_RS02930 PF01817 Chorismate mutase type II JJQ57_RS02935 PF02599 Global regulator protein family JJQ57_RS02950 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS02950 PF00384 Molybdopterin oxidoreductase JJQ57_RS02955 PF02634 FdhD/NarQ family JJQ57_RS02960 PF03466 LysR substrate binding domain JJQ57_RS02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS02965 PF01476 LysM domain JJQ57_RS02965 PF04972 BON domain JJQ57_RS02970 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS02975 PF00293 NUDIX domain JJQ57_RS02980 PF00459 Inositol monophosphatase family JJQ57_RS02995 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS02995 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS03000 PF00696 Amino acid kinase family JJQ57_RS03005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ57_RS03005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ57_RS03015 PF13520 Amino acid permease JJQ57_RS03020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JJQ57_RS03025 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JJQ57_RS03030 PF03480 Bacterial extracellular solute-binding protein, family 7 JJQ57_RS03035 PF00072 Response regulator receiver domain JJQ57_RS03035 PF00158 Sigma-54 interaction domain JJQ57_RS03035 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS03040 PF02743 Cache domain JJQ57_RS03040 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS03045 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JJQ57_RS03050 PF00483 Nucleotidyl transferase JJQ57_RS03055 PF04321 RmlD substrate binding domain JJQ57_RS03060 PF16363 GDP-mannose 4,6 dehydratase JJQ57_RS03065 PF13356 Arm DNA-binding domain JJQ57_RS03065 PF00589 Phage integrase family JJQ57_RS03130 PF07690 Major Facilitator Superfamily JJQ57_RS03135 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS03135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS03140 PF02321 Outer membrane efflux protein JJQ57_RS03145 PF01047 MarR family JJQ57_RS03155 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS03165 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS03170 PF00005 ABC transporter JJQ57_RS03280 PF13356 Arm DNA-binding domain JJQ57_RS03280 PF00589 Phage integrase family JJQ57_RS03285 PF13356 Arm DNA-binding domain JJQ57_RS03285 PF00589 Phage integrase family JJQ57_RS03295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JJQ57_RS03295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JJQ57_RS03300 PF04362 Bacterial Fe(2+) trafficking JJQ57_RS03305 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ57_RS03305 PF00633 Helix-hairpin-helix motif JJQ57_RS03305 PF14815 NUDIX domain JJQ57_RS03305 PF10576 Iron-sulfur binding domain of endonuclease III JJQ57_RS03315 PF01266 FAD dependent oxidoreductase JJQ57_RS03330 PF00475 Imidazoleglycerol-phosphate dehydratase JJQ57_RS03335 PF00117 Glutamine amidotransferase class-I JJQ57_RS03345 PF00977 Histidine biosynthesis protein JJQ57_RS03350 PF00977 Histidine biosynthesis protein JJQ57_RS03375 PF04748 Divergent polysaccharide deacetylase JJQ57_RS03380 PF13180 PDZ domain JJQ57_RS03380 PF03572 Peptidase family S41 JJQ57_RS03385 PF01551 Peptidase family M23 JJQ57_RS03395 PF01676 Metalloenzyme superfamily JJQ57_RS03395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JJQ57_RS03405 PF00462 Glutaredoxin JJQ57_RS03410 PF02556 Preprotein translocase subunit SecB JJQ57_RS03415 PF00588 SpoU rRNA Methylase family JJQ57_RS03425 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS03425 PF00158 Sigma-54 interaction domain JJQ57_RS03425 PF00072 Response regulator receiver domain JJQ57_RS03430 PF00989 PAS fold JJQ57_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS03430 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS03445 PF00924 Mechanosensitive ion channel JJQ57_RS03455 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS03455 PF03951 Glutamine synthetase, beta-Grasp domain JJQ57_RS03460 PF02568 Thiamine biosynthesis protein (ThiI) JJQ57_RS03460 PF02926 THUMP domain JJQ57_RS03465 PF00679 Elongation factor G C-terminus JJQ57_RS03465 PF03144 Elongation factor Tu domain 2 JJQ57_RS03465 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS03470 PF09278 MerR, DNA binding JJQ57_RS03470 PF00376 MerR family regulatory protein JJQ57_RS03490 PF03797 Autotransporter beta-domain JJQ57_RS03490 PF00657 GDSL-like Lipase/Acylhydrolase JJQ57_RS03495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS03500 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JJQ57_RS03515 PF08212 Lipocalin-like domain JJQ57_RS03520 PF01979 Amidohydrolase family JJQ57_RS03525 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS03525 PF07702 UTRA domain JJQ57_RS03530 PF05962 HutD JJQ57_RS03550 PF17392 Urocanase C-terminal domain JJQ57_RS03550 PF17391 Urocanase N-terminal domain JJQ57_RS03550 PF01175 Urocanase Rossmann-like domain JJQ57_RS03555 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JJQ57_RS03560 PF00221 Aromatic amino acid lyase JJQ57_RS03565 PF00324 Amino acid permease JJQ57_RS03575 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS03580 PF00005 ABC transporter JJQ57_RS03580 PF00571 CBS domain JJQ57_RS03585 PF00221 Aromatic amino acid lyase JJQ57_RS03590 PF01979 Amidohydrolase family JJQ57_RS03600 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS03605 PF13091 PLD-like domain JJQ57_RS03605 PF13396 Phospholipase_D-nuclease N-terminal JJQ57_RS03625 PF03466 LysR substrate binding domain JJQ57_RS03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS03630 PF01266 FAD dependent oxidoreductase JJQ57_RS03635 PF01042 Endoribonuclease L-PSP JJQ57_RS03640 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS03645 PF00293 NUDIX domain JJQ57_RS03650 PF00561 alpha/beta hydrolase fold JJQ57_RS03655 PF02580 D-Tyr-tRNA(Tyr) deacylase JJQ57_RS03660 PF04349 Periplasmic glucan biosynthesis protein, MdoG JJQ57_RS03665 PF00535 Glycosyl transferase family 2 JJQ57_RS03670 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS03680 PF00005 ABC transporter JJQ57_RS03685 PF03682 Uncharacterised protein family (UPF0158) JJQ57_RS03690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS03690 PF16591 Helical bimodular sensor domain JJQ57_RS03690 PF00672 HAMP domain JJQ57_RS03700 PF00902 Sec-independent protein translocase protein (TatC) JJQ57_RS03705 PF02416 mttA/Hcf106 family JJQ57_RS03710 PF02416 mttA/Hcf106 family JJQ57_RS03715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JJQ57_RS03720 PF01502 Phosphoribosyl-AMP cyclohydrolase JJQ57_RS03725 PF03109 ABC1 family JJQ57_RS03735 PF01209 ubiE/COQ5 methyltransferase family JJQ57_RS03760 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JJQ57_RS03765 PF00561 alpha/beta hydrolase fold JJQ57_RS03770 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JJQ57_RS03780 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS03780 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS03785 PF00227 Proteasome subunit JJQ57_RS03795 PF05746 DALR anticodon binding domain JJQ57_RS03795 PF00750 tRNA synthetases class I (R) JJQ57_RS03795 PF03485 Arginyl tRNA synthetase N terminal domain JJQ57_RS03800 PF00271 Helicase conserved C-terminal domain JJQ57_RS03800 PF00270 DEAD/DEAH box helicase JJQ57_RS03800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JJQ57_RS03800 PF17764 3′ DNA-binding domain (3′BD) JJQ57_RS03800 PF18074 Primosomal protein N C-terminal domain JJQ57_RS03805 PF01197 Ribosomal protein L31 JJQ57_RS03820 PF00390 Malic enzyme, N-terminal domain JJQ57_RS03820 PF03949 Malic enzyme, NAD binding domain JJQ57_RS03825 PF17092 Penicillin-binding protein OB-like domain JJQ57_RS03825 PF00912 Transglycosylase JJQ57_RS03825 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS03830 PF11104 Type IV pilus assembly protein PilM; JJQ57_RS03835 PF05137 Fimbrial assembly protein (PilN) JJQ57_RS03840 PF04350 Pilus assembly protein, PilO JJQ57_RS03845 PF04351 Pilus assembly protein, PilP JJQ57_RS03850 PF11741 AMIN domain JJQ57_RS03850 PF07660 Secretin and TonB N terminus short domain JJQ57_RS03850 PF00263 Bacterial type II and III secretion system protein JJQ57_RS03850 PF03958 Bacterial type II/III secretion system short domain JJQ57_RS03855 PF01202 Shikimate kinase JJQ57_RS03860 PF01761 3-dehydroquinate synthase JJQ57_RS03870 PF00310 Glutamine amidotransferases class-II JJQ57_RS03870 PF04898 Glutamate synthase central domain JJQ57_RS03870 PF01493 GXGXG motif JJQ57_RS03870 PF01645 Conserved region in glutamate synthase JJQ57_RS03875 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS03875 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JJQ57_RS03880 PF01208 Uroporphyrinogen decarboxylase (URO-D) JJQ57_RS03895 PF00106 short chain dehydrogenase JJQ57_RS03900 PF07690 Major Facilitator Superfamily JJQ57_RS03905 PF03466 LysR substrate binding domain JJQ57_RS03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS03910 PF13614 AAA domain JJQ57_RS03925 PF01053 Cys/Met metabolism PLP-dependent enzyme JJQ57_RS03930 PF01925 Sulfite exporter TauE/SafE JJQ57_RS03935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JJQ57_RS03940 PF12795 Mechanosensitive ion channel porin domain JJQ57_RS03940 PF00924 Mechanosensitive ion channel JJQ57_RS03940 PF12794 Mechanosensitive ion channel inner membrane domain 1 JJQ57_RS03945 PF03471 Transporter associated domain JJQ57_RS03945 PF00999 Sodium/hydrogen exchanger family JJQ57_RS03945 PF02080 TrkA-C domain JJQ57_RS03950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS03950 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS03950 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS03950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS03955 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JJQ57_RS03960 PF01625 Peptide methionine sulfoxide reductase JJQ57_RS03965 PF00563 EAL domain JJQ57_RS03965 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS03965 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS03970 PF00364 Biotin-requiring enzyme JJQ57_RS03970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ57_RS03970 PF02817 e3 binding domain JJQ57_RS03975 PF00456 Transketolase, thiamine diphosphate binding domain JJQ57_RS03975 PF17831 Pyruvate dehydrogenase E1 component middle domain JJQ57_RS03980 PF08335 GlnD PII-uridylyltransferase JJQ57_RS03980 PF03710 Glutamate-ammonia ligase adenylyltransferase JJQ57_RS03985 PF01063 Amino-transferase class IV JJQ57_RS03990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JJQ57_RS03995 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JJQ57_RS04000 PF00534 Glycosyl transferases group 1 JJQ57_RS04000 PF13439 Glycosyltransferase Family 4 JJQ57_RS04025 PF16861 Carbamoyltransferase C-terminus JJQ57_RS04025 PF02543 Carbamoyltransferase N-terminus JJQ57_RS04030 PF00534 Glycosyl transferases group 1 JJQ57_RS04050 PF00535 Glycosyl transferase family 2 JJQ57_RS04055 PF04932 O-Antigen ligase JJQ57_RS04065 PF00664 ABC transporter transmembrane region JJQ57_RS04065 PF00005 ABC transporter JJQ57_RS04070 PF01467 Cytidylyltransferase-like JJQ57_RS04070 PF00294 pfkB family carbohydrate kinase JJQ57_RS04080 PF07690 Major Facilitator Superfamily JJQ57_RS04085 PF00665 Integrase core domain JJQ57_RS04090 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS04090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS04090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS04095 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS04095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS04095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS04105 PF00248 Aldo/keto reductase family JJQ57_RS04110 PF01266 FAD dependent oxidoreductase JJQ57_RS04115 PF00893 Small Multidrug Resistance protein JJQ57_RS04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS04120 PF03466 LysR substrate binding domain JJQ57_RS04125 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JJQ57_RS04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS04135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS04150 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS04150 PF00072 Response regulator receiver domain JJQ57_RS04160 PF01627 Hpt domain JJQ57_RS04160 PF00672 HAMP domain JJQ57_RS04160 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS04160 PF00072 Response regulator receiver domain JJQ57_RS04160 PF17149 Periplasmic sensor domain found in signal transduction proteins JJQ57_RS04165 PF00324 Amino acid permease JJQ57_RS04170 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS04175 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS04175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS04175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS04185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS04185 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS04185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS04190 PF00155 Aminotransferase class I and II JJQ57_RS04195 PF02525 Flavodoxin-like fold JJQ57_RS04200 PF02321 Outer membrane efflux protein JJQ57_RS04205 PF13667 ThiC-associated domain JJQ57_RS04205 PF01964 Radical SAM ThiC family JJQ57_RS04215 PF00293 NUDIX domain JJQ57_RS04225 PF00149 Calcineurin-like phosphoesterase JJQ57_RS04230 PF05728 Uncharacterised protein family (UPF0227) JJQ57_RS04235 PF01751 Toprim domain JJQ57_RS04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS04235 PF00986 DNA gyrase B subunit, carboxyl terminus JJQ57_RS04235 PF00204 DNA gyrase B JJQ57_RS04250 PF03989 DNA gyrase C-terminal domain, beta-propeller JJQ57_RS04250 PF00521 DNA gyrase/topoisomerase IV, subunit A JJQ57_RS04260 PF04307 LexA-binding, inner membrane-associated putative hydrolase JJQ57_RS04275 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS04275 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS04275 PF00563 EAL domain JJQ57_RS04285 PF02666 Phosphatidylserine decarboxylase JJQ57_RS04290 PF00581 Rhodanese-like domain JJQ57_RS04300 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS04305 PF13677 Membrane MotB of proton-channel complex MotA/MotB JJQ57_RS04305 PF00691 OmpA family JJQ57_RS04310 PF03193 RsgA GTPase JJQ57_RS04315 PF00929 Exonuclease JJQ57_RS04320 PF08331 Domain of unknown function (DUF1730) JJQ57_RS04325 PF01256 Carbohydrate kinase JJQ57_RS04325 PF03853 YjeF-related protein N-terminus JJQ57_RS04330 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JJQ57_RS04335 PF01520 N-acetylmuramoyl-L-alanine amidase JJQ57_RS04335 PF11741 AMIN domain JJQ57_RS04340 PF01119 DNA mismatch repair protein, C-terminal domain JJQ57_RS04340 PF08676 MutL C terminal dimerisation domain JJQ57_RS04350 PF17209 Hfq protein JJQ57_RS04355 PF16360 GTP-binding GTPase Middle Region JJQ57_RS04355 PF13167 GTP-binding GTPase N-terminal JJQ57_RS04355 PF01926 50S ribosome-binding GTPase JJQ57_RS04360 PF01145 SPFH domain / Band 7 family JJQ57_RS04365 PF01145 SPFH domain / Band 7 family JJQ57_RS04375 PF13393 Histidyl-tRNA synthetase JJQ57_RS04380 PF00709 Adenylosuccinate synthetase JJQ57_RS04395 PF08461 Ribonuclease R winged-helix domain JJQ57_RS04395 PF17876 Cold shock domain JJQ57_RS04395 PF00773 RNB domain JJQ57_RS04395 PF00575 S1 RNA binding domain JJQ57_RS04395 PF08206 Ribonuclease B OB domain JJQ57_RS04400 PF08032 RNA 2'-O ribose methyltransferase substrate binding JJQ57_RS04400 PF00588 SpoU rRNA Methylase family JJQ57_RS04405 PF01250 Ribosomal protein S6 JJQ57_RS04410 PF01084 Ribosomal protein S18 JJQ57_RS04420 PF01281 Ribosomal protein L9, N-terminal domain JJQ57_RS04420 PF03948 Ribosomal protein L9, C-terminal domain JJQ57_RS04425 PF00772 DnaB-like helicase N terminal domain JJQ57_RS04425 PF03796 DnaB-like helicase C terminal domain JJQ57_RS04430 PF00842 Alanine racemase, C-terminal domain JJQ57_RS04430 PF01168 Alanine racemase, N-terminal domain JJQ57_RS04435 PF00232 Glycosyl hydrolase family 1 JJQ57_RS04445 PF00232 Glycosyl hydrolase family 1 JJQ57_RS04450 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS04450 PF00563 EAL domain JJQ57_RS04450 PF13188 PAS domain JJQ57_RS04450 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS04455 PF11842 Domain of unknown function (DUF3362) JJQ57_RS04455 PF08497 Radical SAM N-terminal JJQ57_RS04455 PF04055 Radical SAM superfamily JJQ57_RS04460 PF14403 Circularly permuted ATP-grasp type 2 JJQ57_RS04460 PF04168 A predicted alpha-helical domain with a conserved ER motif. JJQ57_RS04465 PF01841 Transglutaminase-like superfamily JJQ57_RS04465 PF08379 Bacterial transglutaminase-like N-terminal region JJQ57_RS04470 PF05552 Conserved TM helix JJQ57_RS04470 PF00924 Mechanosensitive ion channel JJQ57_RS04475 PF01551 Peptidase family M23 JJQ57_RS04475 PF01476 LysM domain JJQ57_RS04480 PF03641 Possible lysine decarboxylase JJQ57_RS04485 PF00127 Copper binding proteins, plastocyanin/azurin family JJQ57_RS04495 PF02540 NAD synthase JJQ57_RS04500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JJQ57_RS04500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JJQ57_RS04510 PF01467 Cytidylyltransferase-like JJQ57_RS04520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS04520 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS04520 PF00672 HAMP domain JJQ57_RS04525 PF03466 LysR substrate binding domain JJQ57_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS04530 PF13458 Periplasmic binding protein JJQ57_RS04535 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS04540 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS04540 PF11862 Domain of unknown function (DUF3382) JJQ57_RS04545 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ57_RS04545 PF00005 ABC transporter JJQ57_RS04550 PF00005 ABC transporter JJQ57_RS04555 PF02423 Ornithine cyclodeaminase/mu-crystallin family JJQ57_RS04560 PF00106 short chain dehydrogenase JJQ57_RS04570 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS04570 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS04575 PF00355 Rieske [2Fe-2S] domain JJQ57_RS04580 PF07690 Major Facilitator Superfamily JJQ57_RS04585 PF03466 LysR substrate binding domain JJQ57_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS04590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS04590 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS04590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS04595 PF07690 Major Facilitator Superfamily JJQ57_RS04600 PF00171 Aldehyde dehydrogenase family JJQ57_RS04605 PF03573 outer membrane porin, OprD family JJQ57_RS04615 PF04542 Sigma-70 region 2 JJQ57_RS04615 PF08281 Sigma-70, region 4 JJQ57_RS04620 PF16220 Domain of unknown function (DUF4880) JJQ57_RS04620 PF04773 FecR protein JJQ57_RS04625 PF04955 HupE / UreJ protein JJQ57_RS04630 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ57_RS04635 PF01730 UreF JJQ57_RS04640 PF02814 UreE urease accessory protein, N-terminal domain JJQ57_RS04640 PF05194 UreE urease accessory protein, C-terminal domain JJQ57_RS04645 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS04650 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS04650 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS04650 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS04655 PF00487 Fatty acid desaturase JJQ57_RS04665 PF00672 HAMP domain JJQ57_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS04665 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS04670 PF00072 Response regulator receiver domain JJQ57_RS04670 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS04690 PF01292 Prokaryotic cytochrome b561 JJQ57_RS04695 PF00174 Oxidoreductase molybdopterin binding domain JJQ57_RS04705 PF00210 Ferritin-like domain JJQ57_RS04710 PF05170 AsmA family JJQ57_RS04715 PF13411 MerR HTH family regulatory protein JJQ57_RS04740 PF00012 Hsp70 protein JJQ57_RS04760 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ57_RS04770 PF00449 Urease alpha-subunit, N-terminal domain JJQ57_RS04770 PF01979 Amidohydrolase family JJQ57_RS04775 PF00699 Urease beta subunit JJQ57_RS04785 PF00547 Urease, gamma subunit JJQ57_RS04790 PF01774 UreD urease accessory protein JJQ57_RS04800 PF00005 ABC transporter JJQ57_RS04805 PF00005 ABC transporter JJQ57_RS04805 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ57_RS04810 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS04815 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS04820 PF13458 Periplasmic binding protein JJQ57_RS04825 PF01914 MarC family integral membrane protein JJQ57_RS04830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS04830 PF00072 Response regulator receiver domain JJQ57_RS04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS04830 PF01627 Hpt domain JJQ57_RS04830 PF00672 HAMP domain JJQ57_RS04830 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS04835 PF02844 Phosphoribosylglycinamide synthetase, N domain JJQ57_RS04835 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JJQ57_RS04835 PF02843 Phosphoribosylglycinamide synthetase, C domain JJQ57_RS04840 PF01808 AICARFT/IMPCHase bienzyme JJQ57_RS04840 PF02142 MGS-like domain JJQ57_RS04845 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS04850 PF01207 Dihydrouridine synthase (Dus) JJQ57_RS04870 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS04870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS04870 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS04875 PF00364 Biotin-requiring enzyme JJQ57_RS04880 PF01220 Dehydroquinase class II JJQ57_RS04885 PF02683 Cytochrome C biogenesis protein transmembrane region JJQ57_RS04885 PF11412 Disulphide bond corrector protein DsbC JJQ57_RS04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS04895 PF00072 Response regulator receiver domain JJQ57_RS04895 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS04895 PF00563 EAL domain JJQ57_RS04905 PF00293 NUDIX domain JJQ57_RS04910 PF01253 Translation initiation factor SUI1 JJQ57_RS04915 PF17944 Arginine decarboxylase C-terminal helical extension JJQ57_RS04915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ57_RS04915 PF17810 Arginine decarboxylase helical bundle domain JJQ57_RS04925 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS04925 PF00593 TonB dependent receptor JJQ57_RS04930 PF03059 Nicotianamine synthase protein JJQ57_RS04935 PF10100 Staphylopine dehydrogenase JJQ57_RS04940 PF00892 EamA-like transporter family JJQ57_RS04945 PF03006 Haemolysin-III related JJQ57_RS04950 PF00106 short chain dehydrogenase JJQ57_RS04965 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS04965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS04975 PF00797 N-acetyltransferase JJQ57_RS04985 PF00690 Cation transporter/ATPase, N-terminus JJQ57_RS04985 PF00689 Cation transporting ATPase, C-terminus JJQ57_RS05000 PF02690 Na+/Pi-cotransporter JJQ57_RS05010 PF01554 MatE JJQ57_RS05020 PF00535 Glycosyl transferase family 2 JJQ57_RS05045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS05050 PF00561 alpha/beta hydrolase fold JJQ57_RS05060 PF13247 4Fe-4S dicluster domain JJQ57_RS05060 PF09163 Formate dehydrogenase N, transmembrane JJQ57_RS05065 PF01292 Prokaryotic cytochrome b561 JJQ57_RS05070 PF04216 Protein involved in formate dehydrogenase formation JJQ57_RS05075 PF03841 L-seryl-tRNA selenium transferase JJQ57_RS05075 PF12390 Selenocysteine synthase N terminal JJQ57_RS05080 PF09106 Elongation factor SelB, winged helix JJQ57_RS05080 PF09107 Elongation factor SelB, winged helix JJQ57_RS05080 PF03144 Elongation factor Tu domain 2 JJQ57_RS05080 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS05090 PF00202 Aminotransferase class-III JJQ57_RS05095 PF13520 Amino acid permease JJQ57_RS05130 PF04229 GrpB protein JJQ57_RS05135 PF01597 Glycine cleavage H-protein JJQ57_RS05155 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ57_RS05165 PF13847 Methyltransferase domain JJQ57_RS05180 PF12833 Helix-turn-helix domain JJQ57_RS05180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS05190 PF02803 Thiolase, C-terminal domain JJQ57_RS05190 PF00108 Thiolase, N-terminal domain JJQ57_RS05195 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS05200 PF00892 EamA-like transporter family JJQ57_RS05210 PF00072 Response regulator receiver domain JJQ57_RS05220 PF00892 EamA-like transporter family JJQ57_RS05230 PF09278 MerR, DNA binding JJQ57_RS05230 PF00376 MerR family regulatory protein JJQ57_RS05235 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS05240 PF00072 Response regulator receiver domain JJQ57_RS05240 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS05250 PF17284 Spermidine synthase tetramerisation domain JJQ57_RS05255 PF02675 S-adenosylmethionine decarboxylase JJQ57_RS05265 PF01070 FMN-dependent dehydrogenase JJQ57_RS05270 PF02652 L-lactate permease JJQ57_RS05275 PF07729 FCD domain JJQ57_RS05275 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS05280 PF01668 SmpB protein JJQ57_RS05285 PF03364 Polyketide cyclase / dehydrase and lipid transport JJQ57_RS05290 PF03658 RnfH family Ubiquitin JJQ57_RS05295 PF04355 SmpA / OmlA family JJQ57_RS05300 PF01475 Ferric uptake regulator family JJQ57_RS05305 PF02463 RecF/RecN/SMC N terminal domain JJQ57_RS05310 PF01025 GrpE JJQ57_RS05315 PF00012 Hsp70 protein JJQ57_RS05320 PF00226 DnaJ domain JJQ57_RS05320 PF01556 DnaJ C terminal domain JJQ57_RS05320 PF00684 DnaJ central domain JJQ57_RS05325 PF05173 Dihydrodipicolinate reductase, C-terminus JJQ57_RS05325 PF01113 Dihydrodipicolinate reductase, N-terminus JJQ57_RS05330 PF00117 Glutamine amidotransferase class-I JJQ57_RS05330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JJQ57_RS05335 PF01810 LysE type translocator JJQ57_RS05340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS05340 PF02142 MGS-like domain JJQ57_RS05340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JJQ57_RS05345 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ57_RS05345 PF03449 Transcription elongation factor, N-terminal JJQ57_RS05355 PF01985 CRS1 / YhbY (CRM) domain JJQ57_RS05360 PF01728 FtsJ-like methyltransferase JJQ57_RS05365 PF01434 Peptidase family M41 JJQ57_RS05365 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS05365 PF17862 AAA+ lid domain JJQ57_RS05365 PF06480 FtsH Extracellular JJQ57_RS05370 PF00809 Pterin binding enzyme JJQ57_RS05375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJQ57_RS05375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJQ57_RS05375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJQ57_RS05375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJQ57_RS05380 PF00121 Triosephosphate isomerase JJQ57_RS05385 PF03840 Preprotein translocase SecG subunit JJQ57_RS05400 PF17384 RimP C-terminal SH3 domain JJQ57_RS05400 PF02576 RimP N-terminal domain JJQ57_RS05405 PF00575 S1 RNA binding domain JJQ57_RS05405 PF08529 NusA N-terminal domain JJQ57_RS05405 PF13184 NusA-like KH domain JJQ57_RS05410 PF04760 Translation initiation factor IF-2, N-terminal region JJQ57_RS05410 PF08364 Bacterial translation initiation factor IF-2 associated region JJQ57_RS05410 PF11987 Translation-initiation factor 2 JJQ57_RS05410 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS05415 PF02033 Ribosome-binding factor A JJQ57_RS05420 PF01509 TruB family pseudouridylate synthase (N terminal domain) JJQ57_RS05420 PF16198 tRNA pseudouridylate synthase B C-terminal domain JJQ57_RS05420 PF09157 Pseudouridine synthase II TruB, C-terminal JJQ57_RS05425 PF00312 Ribosomal protein S15 JJQ57_RS05430 PF00013 KH domain JJQ57_RS05430 PF00575 S1 RNA binding domain JJQ57_RS05430 PF03725 3' exoribonuclease family, domain 2 JJQ57_RS05430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JJQ57_RS05430 PF01138 3' exoribonuclease family, domain 1 JJQ57_RS05435 PF04972 BON domain JJQ57_RS05440 PF05532 CsbD-like JJQ57_RS05465 PF00501 AMP-binding enzyme JJQ57_RS05465 PF16177 Acetyl-coenzyme A synthetase N-terminus JJQ57_RS05465 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS05470 PF00342 Phosphoglucose isomerase JJQ57_RS05475 PF02261 Aspartate decarboxylase JJQ57_RS05480 PF02569 Pantoate-beta-alanine ligase JJQ57_RS05485 PF02548 Ketopantoate hydroxymethyltransferase JJQ57_RS05490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JJQ57_RS05495 PF01743 Poly A polymerase head domain JJQ57_RS05495 PF12626 Polymerase A arginine-rich C-terminus JJQ57_RS05495 PF12627 Probable RNA and SrmB- binding site of polymerase A JJQ57_RS05500 PF00158 Sigma-54 interaction domain JJQ57_RS05500 PF00072 Response regulator receiver domain JJQ57_RS05500 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS05505 PF00989 PAS fold JJQ57_RS05505 PF08447 PAS fold JJQ57_RS05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS05505 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS05515 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ57_RS05520 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ57_RS05525 PF00155 Aminotransferase class I and II JJQ57_RS05530 PF17746 SfsA N-terminal OB domain JJQ57_RS05530 PF03749 Sugar fermentation stimulation protein RE domain JJQ57_RS05535 PF05958 tRNA (Uracil-5-)-methyltransferase JJQ57_RS05540 PF00860 Permease family JJQ57_RS05560 PF00155 Aminotransferase class I and II JJQ57_RS05585 PF00593 TonB dependent receptor JJQ57_RS05585 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS05590 PF05171 Haemin-degrading HemS.ChuX domain JJQ57_RS05595 PF01497 Periplasmic binding protein JJQ57_RS05600 PF01032 FecCD transport family JJQ57_RS05605 PF00005 ABC transporter JJQ57_RS05615 PF00027 Cyclic nucleotide-binding domain JJQ57_RS05635 PF00912 Transglycosylase JJQ57_RS05635 PF14814 Bifunctional transglycosylase second domain JJQ57_RS05635 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS05645 PF04287 tRNA pseudouridine synthase C JJQ57_RS05660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS05660 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS05660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS05665 PF10369 Small subunit of acetolactate synthase JJQ57_RS05670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JJQ57_RS05670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JJQ57_RS05675 PF01066 CDP-alcohol phosphatidyltransferase JJQ57_RS05680 PF00174 Oxidoreductase molybdopterin binding domain JJQ57_RS05685 PF01794 Ferric reductase like transmembrane component JJQ57_RS05715 PF04403 Paraquat-inducible protein A JJQ57_RS05720 PF04403 Paraquat-inducible protein A JJQ57_RS05725 PF02470 MlaD protein JJQ57_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS05735 PF01547 Bacterial extracellular solute-binding protein JJQ57_RS05780 PF00583 Acetyltransferase (GNAT) family JJQ57_RS05790 PF00484 Carbonic anhydrase JJQ57_RS05795 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS05795 PF00593 TonB dependent receptor JJQ57_RS05800 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB JJQ57_RS05805 PF01381 Helix-turn-helix JJQ57_RS05850 PF00176 SNF2 family N-terminal domain JJQ57_RS05850 PF12137 RNA polymerase recycling family C-terminal JJQ57_RS05850 PF00271 Helicase conserved C-terminal domain JJQ57_RS05850 PF18337 RapA N-terminal Tudor like domain JJQ57_RS05850 PF18339 RapA N-terminal Tudor like domain 1 JJQ57_RS05855 PF00271 Helicase conserved C-terminal domain JJQ57_RS05855 PF09369 Domain of unknown function (DUF1998) JJQ57_RS05855 PF00270 DEAD/DEAH box helicase JJQ57_RS05865 PF00589 Phage integrase family JJQ57_RS05865 PF13356 Arm DNA-binding domain JJQ57_RS05870 PF01926 50S ribosome-binding GTPase JJQ57_RS05870 PF06071 Protein of unknown function (DUF933) JJQ57_RS05875 PF01195 Peptidyl-tRNA hydrolase JJQ57_RS05880 PF14693 Ribosomal protein TL5, C-terminal domain JJQ57_RS05880 PF01386 Ribosomal L25p family JJQ57_RS05885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JJQ57_RS05885 PF14572 Phosphoribosyl synthetase-associated domain JJQ57_RS05895 PF08544 GHMP kinases C terminal JJQ57_RS05895 PF00288 GHMP kinases N terminal domain JJQ57_RS05900 PF03550 Outer membrane lipoprotein LolB JJQ57_RS05910 PF01488 Shikimate / quinate 5-dehydrogenase JJQ57_RS05910 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JJQ57_RS05910 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JJQ57_RS05915 PF00472 RF-1 domain JJQ57_RS05915 PF03462 PCRF domain JJQ57_RS05920 PF05175 Methyltransferase small domain JJQ57_RS05920 PF17827 PrmC N-terminal domain JJQ57_RS05925 PF00899 ThiF family JJQ57_RS05930 PF01177 Asp/Glu/Hydantoin racemase JJQ57_RS05935 PF09411 Lipid A 3-O-deacylase (PagL) JJQ57_RS05940 PF03441 FAD binding domain of DNA photolyase JJQ57_RS05940 PF00875 DNA photolyase JJQ57_RS05945 PF13411 MerR HTH family regulatory protein JJQ57_RS05955 PF01593 Flavin containing amine oxidoreductase JJQ57_RS05960 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS05960 PF08338 Domain of unknown function (DUF1731) JJQ57_RS05965 PF00762 Ferrochelatase JJQ57_RS06005 PF00860 Permease family JJQ57_RS06015 PF00156 Phosphoribosyl transferase domain JJQ57_RS06040 PF06039 Malate:quinone oxidoreductase (Mqo) JJQ57_RS06075 PF02308 MgtC family JJQ57_RS06080 PF02586 SOS response associated peptidase (SRAP) JJQ57_RS06085 PF00672 HAMP domain JJQ57_RS06085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS06090 PF01435 Peptidase family M48 JJQ57_RS06105 PF01169 Uncharacterized protein family UPF0016 JJQ57_RS06110 PF00324 Amino acid permease JJQ57_RS06115 PF08468 Methyltransferase small domain N-terminal JJQ57_RS06115 PF05175 Methyltransferase small domain JJQ57_RS06120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS06120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS06130 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ57_RS06130 PF17287 POTRA domain JJQ57_RS06130 PF08479 POTRA domain, ShlB-type JJQ57_RS06145 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS06150 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS06150 PF01799 [2Fe-2S] binding domain JJQ57_RS06155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS06155 PF00034 Cytochrome c JJQ57_RS06160 PF02625 XdhC and CoxI family JJQ57_RS06160 PF13478 XdhC Rossmann domain JJQ57_RS06170 PF05175 Methyltransferase small domain JJQ57_RS06175 PF03480 Bacterial extracellular solute-binding protein, family 7 JJQ57_RS06180 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS06180 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS06185 PF01741 Large-conductance mechanosensitive channel, MscL JJQ57_RS06190 PF00199 Catalase JJQ57_RS06190 PF06628 Catalase-related immune-responsive JJQ57_RS06195 PF00199 Catalase JJQ57_RS06195 PF06628 Catalase-related immune-responsive JJQ57_RS06215 PF18073 Rubredoxin metal binding domain JJQ57_RS06220 PF07238 PilZ domain JJQ57_RS06230 PF02554 Carbon starvation protein CstA JJQ57_RS06230 PF13722 5TM C-terminal transporter carbon starvation CstA JJQ57_RS06235 PF04328 Selenoprotein, putative JJQ57_RS06240 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ57_RS06240 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ57_RS06250 PF00464 Serine hydroxymethyltransferase JJQ57_RS06255 PF00563 EAL domain JJQ57_RS06255 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS06255 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS06265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS06265 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS06270 PF00873 AcrB/AcrD/AcrF family JJQ57_RS06275 PF02321 Outer membrane efflux protein JJQ57_RS06290 PF12848 ABC transporter JJQ57_RS06290 PF00005 ABC transporter JJQ57_RS06295 PF12704 MacB-like periplasmic core domain JJQ57_RS06295 PF02687 FtsX-like permease family JJQ57_RS06295 PF00005 ABC transporter JJQ57_RS06300 PF00005 ABC transporter JJQ57_RS06300 PF02687 FtsX-like permease family JJQ57_RS06300 PF12704 MacB-like periplasmic core domain JJQ57_RS06325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JJQ57_RS06325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JJQ57_RS06330 PF03150 Di-haem cytochrome c peroxidase JJQ57_RS06330 PF00034 Cytochrome c JJQ57_RS06340 PF01137 RNA 3'-terminal phosphate cyclase JJQ57_RS06340 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JJQ57_RS06345 PF10127 RNA repair pathway DNA polymerase beta family JJQ57_RS06350 PF01139 tRNA-splicing ligase RtcB JJQ57_RS06365 PF06956 Regulator of RNA terminal phosphate cyclase JJQ57_RS06365 PF00158 Sigma-54 interaction domain JJQ57_RS06390 PF13654 AAA domain JJQ57_RS06390 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ57_RS06400 PF03350 Uncharacterized protein family, UPF0114 JJQ57_RS06410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS06410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ57_RS06415 PF00034 Cytochrome c JJQ57_RS06415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS06425 PF00348 Polyprenyl synthetase JJQ57_RS06430 PF00829 Ribosomal prokaryotic L21 protein JJQ57_RS06435 PF01016 Ribosomal L27 protein JJQ57_RS06440 PF01018 GTP1/OBG JJQ57_RS06440 PF01926 50S ribosome-binding GTPase JJQ57_RS06445 PF00696 Amino acid kinase family JJQ57_RS06445 PF01472 PUA domain JJQ57_RS06450 PF05981 CreA protein JJQ57_RS06455 PF01649 Ribosomal protein S20 JJQ57_RS06460 PF03023 Lipid II flippase MurJ JJQ57_RS06465 PF06574 FAD synthetase JJQ57_RS06465 PF01687 Riboflavin kinase JJQ57_RS06470 PF06827 Zinc finger found in FPG and IleRS JJQ57_RS06470 PF00133 tRNA synthetases class I (I, L, M and V) JJQ57_RS06470 PF08264 Anticodon-binding domain of tRNA JJQ57_RS06475 PF01252 Signal peptidase (SPase) II JJQ57_RS06480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS06485 PF02401 LytB protein JJQ57_RS06490 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JJQ57_RS06490 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS06500 PF05567 Neisseria PilC beta-propeller domain JJQ57_RS06520 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS06520 PF00114 Pilin (bacterial filament) JJQ57_RS06530 PF01266 FAD dependent oxidoreductase JJQ57_RS06535 PF00158 Sigma-54 interaction domain JJQ57_RS06535 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS06535 PF00072 Response regulator receiver domain JJQ57_RS06540 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS06550 PF13525 Outer membrane lipoprotein JJQ57_RS06555 PF00849 RNA pseudouridylate synthase JJQ57_RS06555 PF01479 S4 domain JJQ57_RS06560 PF02578 Multi-copper polyphenol oxidoreductase laccase JJQ57_RS06565 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS06565 PF02861 Clp amino terminal domain, pathogenicity island component JJQ57_RS06565 PF17871 AAA lid domain JJQ57_RS06565 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS06565 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS06585 PF00589 Phage integrase family JJQ57_RS06595 PF00872 Transposase, Mutator family JJQ57_RS06610 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JJQ57_RS06615 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JJQ57_RS06725 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS06725 PF12705 PD-(D/E)XK nuclease superfamily JJQ57_RS06725 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS06860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ57_RS06860 PF00437 Type II/IV secretion system protein JJQ57_RS06875 PF00437 Type II/IV secretion system protein JJQ57_RS06900 PF05973 Phage derived protein Gp49-like (DUF891) JJQ57_RS06905 PF01381 Helix-turn-helix JJQ57_RS06915 PF00176 SNF2 family N-terminal domain JJQ57_RS06915 PF00271 Helicase conserved C-terminal domain JJQ57_RS06930 PF01131 DNA topoisomerase JJQ57_RS06930 PF01751 Toprim domain JJQ57_RS06930 PF01396 Topoisomerase DNA binding C4 zinc finger JJQ57_RS06985 PF03869 Arc-like DNA binding domain JJQ57_RS06990 PF04245 37-kD nucleoid-associated bacterial protein JJQ57_RS07030 PF00772 DnaB-like helicase N terminal domain JJQ57_RS07030 PF03796 DnaB-like helicase C terminal domain JJQ57_RS07070 PF13614 AAA domain JJQ57_RS07075 PF05860 haemagglutination activity domain JJQ57_RS07080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ57_RS07080 PF08479 POTRA domain, ShlB-type JJQ57_RS07085 PF03969 AFG1-like ATPase JJQ57_RS07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS07130 PF03884 DNA gyrase inhibitor YacG JJQ57_RS07135 PF01121 Dephospho-CoA kinase JJQ57_RS07140 PF06750 Bacterial Peptidase A24 N-terminal domain JJQ57_RS07140 PF01478 Type IV leader peptidase family JJQ57_RS07145 PF00482 Type II secretion system (T2SS), protein F JJQ57_RS07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS07185 PF03466 LysR substrate binding domain JJQ57_RS07190 PF00732 GMC oxidoreductase JJQ57_RS07190 PF05199 GMC oxidoreductase JJQ57_RS07195 PF07690 Major Facilitator Superfamily JJQ57_RS07195 PF00083 Sugar (and other) transporter JJQ57_RS07200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS07200 PF00672 HAMP domain JJQ57_RS07200 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS07210 PF01739 CheR methyltransferase, SAM binding domain JJQ57_RS07230 PF00360 Phytochrome region JJQ57_RS07230 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS07230 PF01590 GAF domain JJQ57_RS07230 PF00563 EAL domain JJQ57_RS07240 PF01336 OB-fold nucleic acid binding domain JJQ57_RS07240 PF00152 tRNA synthetases class II (D, K and N) JJQ57_RS07265 PF07634 RtxA repeat JJQ57_RS07265 PF16671 Actin cross-linking domain JJQ57_RS07265 PF11713 Peptidase C80 family JJQ57_RS07265 PF12146 Serine aminopeptidase, S33 JJQ57_RS07265 PF11647 Membrane Localization Domain JJQ57_RS07275 PF01661 Macro domain JJQ57_RS07280 PF00691 OmpA family JJQ57_RS07290 PF00403 Heavy-metal-associated domain JJQ57_RS07295 PF13411 MerR HTH family regulatory protein JJQ57_RS07305 PF00311 Phosphoenolpyruvate carboxylase JJQ57_RS07310 PF05191 Adenylate kinase, active site lid JJQ57_RS07315 PF00814 Glycoprotease family JJQ57_RS07325 PF01904 Protein of unknown function DUF72 JJQ57_RS07340 PF04445 Putative SAM-dependent methyltransferase JJQ57_RS07355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS07360 PF00873 AcrB/AcrD/AcrF family JJQ57_RS07375 PF01553 Acyltransferase JJQ57_RS07380 PF00005 ABC transporter JJQ57_RS07400 PF02657 Fe-S metabolism associated domain JJQ57_RS07405 PF00266 Aminotransferase class-V JJQ57_RS07410 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JJQ57_RS07410 PF14602 Hexapeptide repeat of succinyl-transferase JJQ57_RS07415 PF01810 LysE type translocator JJQ57_RS07420 PF03960 ArsC family JJQ57_RS07440 PF00999 Sodium/hydrogen exchanger family JJQ57_RS07445 PF00155 Aminotransferase class I and II JJQ57_RS07450 PF01966 HD domain JJQ57_RS07450 PF01909 Nucleotidyltransferase domain JJQ57_RS07450 PF08335 GlnD PII-uridylyltransferase JJQ57_RS07450 PF01842 ACT domain JJQ57_RS07455 PF00557 Metallopeptidase family M24 JJQ57_RS07460 PF00318 Ribosomal protein S2 JJQ57_RS07465 PF00889 Elongation factor TS JJQ57_RS07470 PF00696 Amino acid kinase family JJQ57_RS07475 PF01765 Ribosome recycling factor JJQ57_RS07480 PF01255 Putative undecaprenyl diphosphate synthase JJQ57_RS07490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JJQ57_RS07490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JJQ57_RS07490 PF13288 DXP reductoisomerase C-terminal domain JJQ57_RS07495 PF13180 PDZ domain JJQ57_RS07495 PF17820 PDZ domain JJQ57_RS07495 PF02163 Peptidase family M50 JJQ57_RS07500 PF07244 Surface antigen variable number repeat JJQ57_RS07500 PF01103 Surface antigen JJQ57_RS07505 PF03938 Outer membrane protein (OmpH-like) JJQ57_RS07510 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JJQ57_RS07510 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS07515 PF07977 FabA-like domain JJQ57_RS07520 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS07520 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JJQ57_RS07525 PF02684 Lipid-A-disaccharide synthetase JJQ57_RS07530 PF01351 Ribonuclease HII JJQ57_RS07535 PF01235 Sodium:alanine symporter family JJQ57_RS07540 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJQ57_RS07540 PF14579 Helix-hairpin-helix motif JJQ57_RS07540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJQ57_RS07540 PF02811 PHP domain JJQ57_RS07540 PF01336 OB-fold nucleic acid binding domain JJQ57_RS07545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JJQ57_RS07550 PF01171 PP-loop family JJQ57_RS07550 PF09179 TilS substrate binding domain JJQ57_RS07550 PF11734 TilS substrate C-terminal domain JJQ57_RS07555 PF00117 Glutamine amidotransferase class-I JJQ57_RS07555 PF06418 CTP synthase N-terminus JJQ57_RS07560 PF00793 DAHP synthetase I family JJQ57_RS07565 PF03952 Enolase, N-terminal domain JJQ57_RS07565 PF00113 Enolase, C-terminal TIM barrel domain JJQ57_RS07570 PF04977 Septum formation initiator JJQ57_RS07575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JJQ57_RS07585 PF04143 Sulphur transport JJQ57_RS07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS07590 PF03466 LysR substrate binding domain JJQ57_RS07595 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS07595 PF00107 Zinc-binding dehydrogenase JJQ57_RS07600 PF00756 Putative esterase JJQ57_RS07605 PF02542 YgbB family JJQ57_RS07610 PF01142 tRNA pseudouridine synthase D (TruD) JJQ57_RS07615 PF01975 Survival protein SurE JJQ57_RS07625 PF01551 Peptidase family M23 JJQ57_RS07625 PF01476 LysM domain JJQ57_RS07630 PF00140 Sigma-70 factor, region 1.2 JJQ57_RS07630 PF04542 Sigma-70 region 2 JJQ57_RS07630 PF04539 Sigma-70 region 3 JJQ57_RS07630 PF04545 Sigma-70, region 4 JJQ57_RS07635 PF00037 4Fe-4S binding domain JJQ57_RS07635 PF11953 Domain of unknown function (DUF3470) JJQ57_RS07640 PF01624 MutS domain I JJQ57_RS07640 PF05190 MutS family domain IV JJQ57_RS07640 PF00488 MutS domain V JJQ57_RS07640 PF05188 MutS domain II JJQ57_RS07640 PF05192 MutS domain III JJQ57_RS07650 PF02464 Competence-damaged protein JJQ57_RS07655 PF00154 recA bacterial DNA recombination protein JJQ57_RS07660 PF02631 RecX family JJQ57_RS07670 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JJQ57_RS07670 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS07670 PF10996 Beta-Casp domain JJQ57_RS07675 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JJQ57_RS07675 PF09363 XFP C-terminal domain JJQ57_RS07675 PF09364 XFP N-terminal domain JJQ57_RS07680 PF12843 Putative quorum-sensing-regulated virulence factor JJQ57_RS07690 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS07700 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS07705 PF08402 TOBE domain JJQ57_RS07705 PF00005 ABC transporter JJQ57_RS07710 PF03942 DTW domain JJQ57_RS07720 PF00072 Response regulator receiver domain JJQ57_RS07720 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS07725 PF01219 Prokaryotic diacylglycerol kinase JJQ57_RS07730 PF01645 Conserved region in glutamate synthase JJQ57_RS07735 PF01197 Ribosomal protein L31 JJQ57_RS07740 PF00444 Ribosomal protein L36 JJQ57_RS07750 PF00795 Carbon-nitrogen hydrolase JJQ57_RS07755 PF00324 Amino acid permease JJQ57_RS07760 PF12833 Helix-turn-helix domain JJQ57_RS07760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JJQ57_RS07760 PF02805 Metal binding domain of Ada JJQ57_RS07760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JJQ57_RS07765 PF00083 Sugar (and other) transporter JJQ57_RS07765 PF07690 Major Facilitator Superfamily JJQ57_RS07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS07770 PF03466 LysR substrate binding domain JJQ57_RS07775 PF18158 Adaptive response protein AidB N-terminal domain JJQ57_RS07775 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS07775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS07780 PF02515 CoA-transferase family III JJQ57_RS07785 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS07790 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JJQ57_RS07790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS07790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS07795 PF00108 Thiolase, N-terminal domain JJQ57_RS07795 PF02803 Thiolase, C-terminal domain JJQ57_RS07800 PF03573 outer membrane porin, OprD family JJQ57_RS07805 PF03466 LysR substrate binding domain JJQ57_RS07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS07810 PF00561 alpha/beta hydrolase fold JJQ57_RS07815 PF06942 GlpM protein JJQ57_RS07820 PF01266 FAD dependent oxidoreductase JJQ57_RS07820 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JJQ57_RS07825 PF08220 DeoR-like helix-turn-helix domain JJQ57_RS07825 PF00455 DeoR C terminal sensor domain JJQ57_RS07830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ57_RS07830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ57_RS07835 PF00230 Major intrinsic protein JJQ57_RS07840 PF04073 Aminoacyl-tRNA editing domain JJQ57_RS07845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ57_RS07845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ57_RS07850 PF02567 Phenazine biosynthesis-like protein JJQ57_RS07870 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS07870 PF08361 MAATS-type transcriptional repressor, C-terminal region JJQ57_RS07875 PF07690 Major Facilitator Superfamily JJQ57_RS07885 PF02311 AraC-like ligand binding domain JJQ57_RS07885 PF12833 Helix-turn-helix domain JJQ57_RS07890 PF00171 Aldehyde dehydrogenase family JJQ57_RS07895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ57_RS07895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ57_RS07900 PF16177 Acetyl-coenzyme A synthetase N-terminus JJQ57_RS07900 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS07900 PF00501 AMP-binding enzyme JJQ57_RS07905 PF00107 Zinc-binding dehydrogenase JJQ57_RS07905 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS07915 PF03466 LysR substrate binding domain JJQ57_RS07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS07925 PF01026 TatD related DNase JJQ57_RS07930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JJQ57_RS07930 PF00356 Bacterial regulatory proteins, lacI family JJQ57_RS07935 PF00391 PEP-utilising enzyme, mobile domain JJQ57_RS07935 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ57_RS07935 PF00381 PTS HPr component phosphorylation site JJQ57_RS07935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JJQ57_RS07935 PF05524 PEP-utilising enzyme, N-terminal JJQ57_RS07940 PF00294 pfkB family carbohydrate kinase JJQ57_RS07945 PF02378 Phosphotransferase system, EIIC JJQ57_RS07945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JJQ57_RS07950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ57_RS07950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ57_RS07950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ57_RS07955 PF00893 Small Multidrug Resistance protein JJQ57_RS07960 PF00892 EamA-like transporter family JJQ57_RS07965 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JJQ57_RS07970 PF01522 Polysaccharide deacetylase JJQ57_RS07975 PF00551 Formyl transferase JJQ57_RS07975 PF02911 Formyl transferase, C-terminal domain JJQ57_RS07975 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS07980 PF00535 Glycosyl transferase family 2 JJQ57_RS07985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ57_RS07990 PF01050 Mannose-6-phosphate isomerase JJQ57_RS07990 PF00483 Nucleotidyl transferase JJQ57_RS07995 PF11182 Alginate O-acetyl transferase AlgF JJQ57_RS08000 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JJQ57_RS08005 PF03062 MBOAT, membrane-bound O-acyltransferase family JJQ57_RS08010 PF05426 Alginate lyase JJQ57_RS08015 PF16824 C-terminal carbohydrate-binding module JJQ57_RS08015 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JJQ57_RS08020 PF05048 Periplasmic copper-binding protein (NosD) JJQ57_RS08025 PF13372 Alginate export JJQ57_RS08035 PF07238 PilZ domain JJQ57_RS08045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ57_RS08045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ57_RS08045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ57_RS08050 PF03883 Peroxide stress protein YaaA JJQ57_RS08055 PF08402 TOBE domain JJQ57_RS08055 PF00005 ABC transporter JJQ57_RS08060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JJQ57_RS08060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JJQ57_RS08070 PF12951 Passenger-associated-transport-repeat JJQ57_RS08070 PF03797 Autotransporter beta-domain JJQ57_RS08070 PF00082 Subtilase family JJQ57_RS08075 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS08075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ57_RS08075 PF00384 Molybdopterin oxidoreductase JJQ57_RS08080 PF00462 Glutaredoxin JJQ57_RS08085 PF07690 Major Facilitator Superfamily JJQ57_RS08090 PF00210 Ferritin-like domain JJQ57_RS08095 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS08100 PF00578 AhpC/TSA family JJQ57_RS08100 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ57_RS08105 PF00929 Exonuclease JJQ57_RS08110 PF01979 Amidohydrolase family JJQ57_RS08120 PF00764 Arginosuccinate synthase JJQ57_RS08125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS08130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS08130 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS08135 PF00873 AcrB/AcrD/AcrF family JJQ57_RS08140 PF02321 Outer membrane efflux protein JJQ57_RS08165 PF00206 Lyase JJQ57_RS08165 PF10397 Adenylosuccinate lyase C-terminus JJQ57_RS08170 PF10397 Adenylosuccinate lyase C-terminus JJQ57_RS08170 PF00206 Lyase JJQ57_RS08185 PF10576 Iron-sulfur binding domain of endonuclease III JJQ57_RS08185 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ57_RS08185 PF00633 Helix-hairpin-helix motif JJQ57_RS08190 PF02508 Rnf-Nqr subunit, membrane protein JJQ57_RS08195 PF04205 FMN-binding domain JJQ57_RS08200 PF03116 NQR2, RnfD, RnfE family JJQ57_RS08205 PF10531 SLBB domain JJQ57_RS08205 PF13375 RnfC Barrel sandwich hybrid domain JJQ57_RS08205 PF12838 4Fe-4S dicluster domain JJQ57_RS08205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JJQ57_RS08210 PF04060 Putative Fe-S cluster JJQ57_RS08215 PF02508 Rnf-Nqr subunit, membrane protein JJQ57_RS08230 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS08250 PF01588 Putative tRNA binding domain JJQ57_RS08250 PF09334 tRNA synthetases class I (M) JJQ57_RS08255 PF10609 NUBPL iron-transfer P-loop NTPase JJQ57_RS08260 PF00692 dUTPase JJQ57_RS08270 PF00114 Pilin (bacterial filament) JJQ57_RS08270 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS08280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JJQ57_RS08280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JJQ57_RS08290 PF01510 N-acetylmuramoyl-L-alanine amidase JJQ57_RS08300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS08300 PF02743 Cache domain JJQ57_RS08300 PF00672 HAMP domain JJQ57_RS08305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JJQ57_RS08305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JJQ57_RS08315 PF00884 Sulfatase JJQ57_RS08325 PF13640 2OG-Fe(II) oxygenase superfamily JJQ57_RS08325 PF18331 PKHD-type hydroxylase C-terminal domain JJQ57_RS08330 PF00593 TonB dependent receptor JJQ57_RS08330 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS08335 PF00667 FAD binding domain JJQ57_RS08335 PF00258 Flavodoxin JJQ57_RS08335 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS08435 PF10124 Mu-like prophage major head subunit gpT JJQ57_RS08445 PF05069 Phage virion morphogenesis family JJQ57_RS08450 PF04233 Phage Mu protein F like protein JJQ57_RS08455 PF06074 Protein of unknown function (DUF935) JJQ57_RS08555 PF07352 Bacteriophage Mu Gam like protein JJQ57_RS08610 PF03746 LamB/YcsF family JJQ57_RS08620 PF02626 Carboxyltransferase domain, subdomain A and B JJQ57_RS08625 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS08630 PF01810 LysE type translocator JJQ57_RS08635 PF00005 ABC transporter JJQ57_RS08635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ57_RS08640 PF00005 ABC transporter JJQ57_RS08640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ57_RS08645 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ57_RS08645 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS08650 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS08655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS08665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS08675 PF01321 Creatinase/Prolidase N-terminal domain JJQ57_RS08675 PF00557 Metallopeptidase family M24 JJQ57_RS08680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS08685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS08695 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS08700 PF00072 Response regulator receiver domain JJQ57_RS08705 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) JJQ57_RS08710 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) JJQ57_RS08715 PF06672 Protein of unknown function (DUF1175) JJQ57_RS08720 PF01835 MG2 domain JJQ57_RS08720 PF00207 Alpha-2-macroglobulin family JJQ57_RS08720 PF07703 Alpha-2-macroglobulin bait region domain JJQ57_RS08725 PF08486 Stage II sporulation protein JJQ57_RS08725 PF10062 Predicted secreted protein (DUF2300) JJQ57_RS08730 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) JJQ57_RS08735 PF02627 Carboxymuconolactone decarboxylase family JJQ57_RS08740 PF03330 Lytic transglycolase JJQ57_RS08745 PF02934 GatB/GatE catalytic domain JJQ57_RS08745 PF02637 GatB domain JJQ57_RS08750 PF01425 Amidase JJQ57_RS08755 PF02686 Glu-tRNAGln amidotransferase C subunit JJQ57_RS08765 PF04085 rod shape-determining protein MreC JJQ57_RS08775 PF02545 Maf-like protein JJQ57_RS08780 PF10150 Ribonuclease E/G family JJQ57_RS08780 PF00575 S1 RNA binding domain JJQ57_RS08790 PF00795 Carbon-nitrogen hydrolase JJQ57_RS08795 PF01523 Putative modulator of DNA gyrase JJQ57_RS08800 PF04751 Protein of unknown function (DUF615) JJQ57_RS08805 PF01523 Putative modulator of DNA gyrase JJQ57_RS08815 PF00206 Lyase JJQ57_RS08815 PF10415 Fumarase C C-terminus JJQ57_RS08825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JJQ57_RS08825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JJQ57_RS08830 PF02535 ZIP Zinc transporter JJQ57_RS08835 PF00381 PTS HPr component phosphorylation site JJQ57_RS08840 PF03668 P-loop ATPase protein family JJQ57_RS08845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JJQ57_RS08850 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JJQ57_RS08855 PF00309 Sigma-54 factor, Activator interacting domain (AID) JJQ57_RS08855 PF04963 Sigma-54 factor, core binding domain JJQ57_RS08855 PF04552 Sigma-54, DNA binding domain JJQ57_RS08860 PF00005 ABC transporter JJQ57_RS08860 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ57_RS08880 PF00571 CBS domain JJQ57_RS08880 PF01380 SIS domain JJQ57_RS08885 PF00005 ABC transporter JJQ57_RS08890 PF02405 Permease MlaE JJQ57_RS08895 PF02470 MlaD protein JJQ57_RS08900 PF05494 MlaC protein JJQ57_RS08915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJQ57_RS08920 PF01634 ATP phosphoribosyltransferase JJQ57_RS08925 PF00815 Histidinol dehydrogenase JJQ57_RS08930 PF00155 Aminotransferase class I and II JJQ57_RS08935 PF13180 PDZ domain JJQ57_RS08940 PF01784 NIF3 (NGG1p interacting factor 3) JJQ57_RS08945 PF13406 Transglycosylase SLT domain JJQ57_RS08950 PF01507 Phosphoadenosine phosphosulfate reductase family JJQ57_RS08955 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS08965 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JJQ57_RS08970 PF00579 tRNA synthetases class I (W and Y) JJQ57_RS08975 PF03969 AFG1-like ATPase JJQ57_RS08990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS08990 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS08990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS08995 PF00248 Aldo/keto reductase family JJQ57_RS09000 PF00572 Ribosomal protein L13 JJQ57_RS09005 PF00380 Ribosomal protein S9/S16 JJQ57_RS09010 PF00355 Rieske [2Fe-2S] domain JJQ57_RS09010 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JJQ57_RS09015 PF00032 Cytochrome b(C-terminal)/b6/petD JJQ57_RS09015 PF00033 Cytochrome b/b6/petB JJQ57_RS09020 PF02167 Cytochrome C1 family JJQ57_RS09025 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS09025 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS09030 PF04386 Stringent starvation protein B JJQ57_RS09035 PF04972 BON domain JJQ57_RS09040 PF13580 SIS domain JJQ57_RS09045 PF02021 Uncharacterised protein family UPF0102 JJQ57_RS09050 PF04348 LppC putative lipoprotein JJQ57_RS09055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS09065 PF02381 MraZ protein, putative antitoxin-like JJQ57_RS09070 PF01795 MraW methylase family JJQ57_RS09075 PF04999 Cell division protein FtsL JJQ57_RS09080 PF03717 Penicillin-binding Protein dimerisation domain JJQ57_RS09080 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS09085 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS09085 PF08245 Mur ligase middle domain JJQ57_RS09085 PF01225 Mur ligase family, catalytic domain JJQ57_RS09090 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS09090 PF08245 Mur ligase middle domain JJQ57_RS09090 PF01225 Mur ligase family, catalytic domain JJQ57_RS09095 PF00953 Glycosyl transferase family 4 JJQ57_RS09095 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JJQ57_RS09100 PF08245 Mur ligase middle domain JJQ57_RS09100 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS09105 PF01098 Cell cycle protein JJQ57_RS09110 PF03033 Glycosyltransferase family 28 N-terminal domain JJQ57_RS09110 PF04101 Glycosyltransferase family 28 C-terminal domain JJQ57_RS09115 PF08245 Mur ligase middle domain JJQ57_RS09115 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS09115 PF01225 Mur ligase family, catalytic domain JJQ57_RS09120 PF07478 D-ala D-ala ligase C-terminus JJQ57_RS09120 PF01820 D-ala D-ala ligase N-terminus JJQ57_RS09125 PF08478 POTRA domain, FtsQ-type JJQ57_RS09125 PF03799 Cell division protein FtsQ JJQ57_RS09130 PF02491 SHS2 domain inserted in FTSA JJQ57_RS09135 PF00091 Tubulin/FtsZ family, GTPase domain JJQ57_RS09135 PF12327 FtsZ family, C-terminal domain JJQ57_RS09140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JJQ57_RS09150 PF10145 Phage-related minor tail protein JJQ57_RS09150 PF01551 Peptidase family M23 JJQ57_RS09150 PF01464 Transglycosylase SLT domain JJQ57_RS09155 PF07517 SecA DEAD-like domain JJQ57_RS09155 PF01043 SecA preprotein cross-linking domain JJQ57_RS09155 PF07516 SecA Wing and Scaffold domain JJQ57_RS09155 PF02810 SEC-C motif JJQ57_RS09160 PF01960 ArgJ family JJQ57_RS09165 PF13417 Glutathione S-transferase, N-terminal domain JJQ57_RS09165 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS09170 PF00293 NUDIX domain JJQ57_RS09175 PF01923 Cobalamin adenosyltransferase JJQ57_RS09180 PF00072 Response regulator receiver domain JJQ57_RS09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS09180 PF08448 PAS fold JJQ57_RS09180 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS09180 PF13188 PAS domain JJQ57_RS09185 PF08546 Ketopantoate reductase PanE/ApbA C terminal JJQ57_RS09185 PF02558 Ketopantoate reductase PanE/ApbA JJQ57_RS09190 PF00072 Response regulator receiver domain JJQ57_RS09195 PF04461 Protein of unknown function (DUF520) JJQ57_RS09200 PF00924 Mechanosensitive ion channel JJQ57_RS09200 PF05552 Conserved TM helix JJQ57_RS09205 PF07690 Major Facilitator Superfamily JJQ57_RS09235 PF04186 FxsA cytoplasmic membrane protein JJQ57_RS09240 PF00166 Chaperonin 10 Kd subunit JJQ57_RS09245 PF00118 TCP-1/cpn60 chaperonin family JJQ57_RS09255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JJQ57_RS09270 PF00072 Response regulator receiver domain JJQ57_RS09270 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS09275 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS09275 PF00672 HAMP domain JJQ57_RS09295 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JJQ57_RS09295 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JJQ57_RS09300 PF00873 AcrB/AcrD/AcrF family JJQ57_RS09305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS09330 PF04011 LemA family JJQ57_RS09340 PF00563 EAL domain JJQ57_RS09340 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS09340 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS09345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JJQ57_RS09345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JJQ57_RS09350 PF01810 LysE type translocator JJQ57_RS09360 PF03466 LysR substrate binding domain JJQ57_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS09370 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JJQ57_RS09385 PF04023 FeoA domain JJQ57_RS09390 PF02421 Ferrous iron transport protein B JJQ57_RS09390 PF17910 FeoB cytosolic helical domain JJQ57_RS09390 PF07664 Ferrous iron transport protein B C terminus JJQ57_RS09390 PF07670 Nucleoside recognition JJQ57_RS09395 PF09012 FeoC like transcriptional regulator JJQ57_RS09400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS09405 PF07690 Major Facilitator Superfamily JJQ57_RS09420 PF00582 Universal stress protein family JJQ57_RS09440 PF00258 Flavodoxin JJQ57_RS09440 PF01613 Flavin reductase like domain JJQ57_RS09445 PF00144 Beta-lactamase JJQ57_RS09445 PF11954 Domain of unknown function (DUF3471) JJQ57_RS09460 PF07687 Peptidase dimerisation domain JJQ57_RS09460 PF01546 Peptidase family M20/M25/M40 JJQ57_RS09465 PF07690 Major Facilitator Superfamily JJQ57_RS09470 PF01425 Amidase JJQ57_RS09485 PF13091 PLD-like domain JJQ57_RS09485 PF13396 Phospholipase_D-nuclease N-terminal JJQ57_RS09500 PF01965 DJ-1/PfpI family JJQ57_RS09510 PF01566 Natural resistance-associated macrophage protein JJQ57_RS09515 PF05681 Fumarate hydratase (Fumerase) JJQ57_RS09515 PF05683 Fumarase C-terminus JJQ57_RS09520 PF08448 PAS fold JJQ57_RS09520 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS09525 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS09525 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS09530 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS09535 PF00224 Pyruvate kinase, barrel domain JJQ57_RS09535 PF02887 Pyruvate kinase, alpha/beta domain JJQ57_RS09540 PF00582 Universal stress protein family JJQ57_RS09570 PF17863 AAA lid domain JJQ57_RS09570 PF07726 ATPase family associated with various cellular activities (AAA) JJQ57_RS09600 PF00929 Exonuclease JJQ57_RS09600 PF08411 Exonuclease C-terminal JJQ57_RS09610 PF00551 Formyl transferase JJQ57_RS09630 PF00534 Glycosyl transferases group 1 JJQ57_RS09630 PF13439 Glycosyltransferase Family 4 JJQ57_RS09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS09635 PF00672 HAMP domain JJQ57_RS09635 PF02743 Cache domain JJQ57_RS09640 PF00672 HAMP domain JJQ57_RS09640 PF02743 Cache domain JJQ57_RS09640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS09645 PF05872 Bacterial protein of unknown function (DUF853) JJQ57_RS09650 PF02743 Cache domain JJQ57_RS09650 PF00672 HAMP domain JJQ57_RS09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS09665 PF00263 Bacterial type II and III secretion system protein JJQ57_RS09665 PF13629 Pilus formation protein N terminal region JJQ57_RS09665 PF04972 BON domain JJQ57_RS09675 PF00437 Type II/IV secretion system protein JJQ57_RS09705 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS09705 PF00072 Response regulator receiver domain JJQ57_RS09720 PF08448 PAS fold JJQ57_RS09720 PF08447 PAS fold JJQ57_RS09720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS09725 PF01384 Phosphate transporter family JJQ57_RS09735 PF02743 Cache domain JJQ57_RS09735 PF00672 HAMP domain JJQ57_RS09735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS09750 PF00892 EamA-like transporter family JJQ57_RS09760 PF17946 RecC C-terminal domain JJQ57_RS09765 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS09765 PF12705 PD-(D/E)XK nuclease superfamily JJQ57_RS09765 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS09770 PF13538 UvrD-like helicase C-terminal domain JJQ57_RS09780 PF12320 Type 5 capsule protein repressor C-terminal domain JJQ57_RS09780 PF00149 Calcineurin-like phosphoesterase JJQ57_RS09810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JJQ57_RS09810 PF07733 Bacterial DNA polymerase III alpha NTPase domain JJQ57_RS09810 PF02811 PHP domain JJQ57_RS09810 PF14579 Helix-hairpin-helix motif JJQ57_RS09825 PF01126 Heme oxygenase JJQ57_RS09850 PF11612 Type II secretion system (T2SS), protein J JJQ57_RS09850 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS09855 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS09855 PF12019 Type II transport protein GspH JJQ57_RS09865 PF02501 Type II secretion system (T2SS), protein I JJQ57_RS09865 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS09870 PF08334 Type II secretion system (T2SS), protein G JJQ57_RS09870 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS09890 PF03958 Bacterial type II/III secretion system short domain JJQ57_RS09890 PF00263 Bacterial type II and III secretion system protein JJQ57_RS09895 PF00437 Type II/IV secretion system protein JJQ57_RS09900 PF00482 Type II secretion system (T2SS), protein F JJQ57_RS09905 PF12849 PBP superfamily domain JJQ57_RS09920 PF17287 POTRA domain JJQ57_RS09920 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ57_RS09920 PF08479 POTRA domain, ShlB-type JJQ57_RS09925 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS09930 PF02472 Biopolymer transport protein ExbD/TolR JJQ57_RS09955 PF00639 PPIC-type PPIASE domain JJQ57_RS09965 PF03466 LysR substrate binding domain JJQ57_RS09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS09980 PF07690 Major Facilitator Superfamily JJQ57_RS09985 PF01425 Amidase JJQ57_RS09990 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS09995 PF00535 Glycosyl transferase family 2 JJQ57_RS10000 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS10005 PF00563 EAL domain JJQ57_RS10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS10010 PF03466 LysR substrate binding domain JJQ57_RS10020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS10030 PF09857 Putative toxin of bacterial toxin-antitoxin pair JJQ57_RS10155 PF00145 C-5 cytosine-specific DNA methylase JJQ57_RS10305 PF00561 alpha/beta hydrolase fold JJQ57_RS10320 PF00849 RNA pseudouridylate synthase JJQ57_RS10320 PF01479 S4 domain JJQ57_RS10360 PF03466 LysR substrate binding domain JJQ57_RS10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS10365 PF14864 Alkyl sulfatase C-terminal JJQ57_RS10365 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS10365 PF14863 Alkyl sulfatase dimerisation JJQ57_RS10380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ57_RS10380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ57_RS10390 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS10395 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS10395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS10395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS10400 PF00171 Aldehyde dehydrogenase family JJQ57_RS10405 PF12833 Helix-turn-helix domain JJQ57_RS10405 PF02311 AraC-like ligand binding domain JJQ57_RS10410 PF04294 VanW like protein JJQ57_RS10415 PF03167 Uracil DNA glycosylase superfamily JJQ57_RS10420 PF05145 Transition state regulatory protein AbrB JJQ57_RS10425 PF01970 Tripartite tricarboxylate transporter TctA family JJQ57_RS10440 PF03573 outer membrane porin, OprD family JJQ57_RS10445 PF00072 Response regulator receiver domain JJQ57_RS10445 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS10450 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS10460 PF01571 Aminomethyltransferase folate-binding domain JJQ57_RS10465 PF03937 Flavinator of succinate dehydrogenase JJQ57_RS10475 PF00890 FAD binding domain JJQ57_RS10475 PF02910 Fumarate reductase flavoprotein C-term JJQ57_RS10480 PF04542 Sigma-70 region 2 JJQ57_RS10480 PF08281 Sigma-70, region 4 JJQ57_RS10485 PF03872 Anti sigma-E protein RseA, N-terminal domain JJQ57_RS10485 PF03873 Anti sigma-E protein RseA, C-terminal domain JJQ57_RS10490 PF03888 MucB/RseB N-terminal domain JJQ57_RS10490 PF17188 MucB/RseB C-terminal domain JJQ57_RS10500 PF13180 PDZ domain JJQ57_RS10505 PF03144 Elongation factor Tu domain 2 JJQ57_RS10505 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS10505 PF00679 Elongation factor G C-terminus JJQ57_RS10505 PF06421 GTP-binding protein LepA C-terminus JJQ57_RS10510 PF10502 Signal peptidase, peptidase S26 JJQ57_RS10520 PF14622 Ribonuclease-III-like JJQ57_RS10520 PF00035 Double-stranded RNA binding motif JJQ57_RS10525 PF01926 50S ribosome-binding GTPase JJQ57_RS10525 PF07650 KH domain JJQ57_RS10530 PF11967 Recombination protein O N terminal JJQ57_RS10530 PF02565 Recombination protein O C terminal JJQ57_RS10535 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JJQ57_RS10540 PF08003 Protein of unknown function (DUF1698) JJQ57_RS10545 PF13649 Methyltransferase domain JJQ57_RS10565 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ57_RS10565 PF02190 ATP-dependent protease La (LON) substrate-binding domain JJQ57_RS10565 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS10570 PF12833 Helix-turn-helix domain JJQ57_RS10575 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS10575 PF00593 TonB dependent receptor JJQ57_RS10580 PF00171 Aldehyde dehydrogenase family JJQ57_RS10580 PF01619 Proline dehydrogenase JJQ57_RS10580 PF14850 DNA-binding domain of Proline dehydrogenase JJQ57_RS10580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JJQ57_RS10585 PF00474 Sodium:solute symporter family JJQ57_RS10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS10590 PF03466 LysR substrate binding domain JJQ57_RS10595 PF02525 Flavodoxin-like fold JJQ57_RS10600 PF00893 Small Multidrug Resistance protein JJQ57_RS10625 PF00324 Amino acid permease JJQ57_RS10640 PF03972 MmgE/PrpD family JJQ57_RS10645 PF04303 PrpF protein JJQ57_RS10650 PF00330 Aconitase family (aconitate hydratase) JJQ57_RS10650 PF00694 Aconitase C-terminal domain JJQ57_RS10655 PF00285 Citrate synthase, C-terminal domain JJQ57_RS10665 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS10665 PF07729 FCD domain JJQ57_RS10670 PF08241 Methyltransferase domain JJQ57_RS10675 PF00176 SNF2 family N-terminal domain JJQ57_RS10675 PF12419 SNF2 Helicase protein JJQ57_RS10675 PF00271 Helicase conserved C-terminal domain JJQ57_RS10700 PF00248 Aldo/keto reductase family JJQ57_RS10715 PF01510 N-acetylmuramoyl-L-alanine amidase JJQ57_RS10725 PF01566 Natural resistance-associated macrophage protein JJQ57_RS10730 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS10745 PF00266 Aminotransferase class-V JJQ57_RS10755 PF03466 LysR substrate binding domain JJQ57_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS10760 PF03466 LysR substrate binding domain JJQ57_RS10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS10780 PF05973 Phage derived protein Gp49-like (DUF891) JJQ57_RS10800 PF00589 Phage integrase family JJQ57_RS10800 PF02899 Phage integrase, N-terminal SAM-like domain JJQ57_RS10810 PF13274 Protein of unknown function (DUF4065) JJQ57_RS10815 PF12167 Arm DNA-binding domain JJQ57_RS10815 PF00589 Phage integrase family JJQ57_RS10840 PF03869 Arc-like DNA binding domain JJQ57_RS10845 PF09669 Phage regulatory protein Rha (Phage_pRha) JJQ57_RS10845 PF10549 ORF11CD3 domain JJQ57_RS10865 PF01381 Helix-turn-helix JJQ57_RS10865 PF00717 Peptidase S24-like JJQ57_RS10945 PF09669 Phage regulatory protein Rha (Phage_pRha) JJQ57_RS10945 PF10549 ORF11CD3 domain JJQ57_RS10955 PF00182 Chitinase class I JJQ57_RS10975 PF03354 Phage Terminase JJQ57_RS10980 PF04860 Phage portal protein JJQ57_RS11115 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS11115 PF08361 MAATS-type transcriptional repressor, C-terminal region JJQ57_RS11120 PF00561 alpha/beta hydrolase fold JJQ57_RS11130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS11130 PF12833 Helix-turn-helix domain JJQ57_RS11135 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS11140 PF13488 Glycine zipper JJQ57_RS11140 PF00691 OmpA family JJQ57_RS11145 PF01553 Acyltransferase JJQ57_RS11150 PF07085 DRTGG domain JJQ57_RS11150 PF01515 Phosphate acetyl/butaryl transferase JJQ57_RS11155 PF00871 Acetokinase family JJQ57_RS11165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS11170 PF00255 Glutathione peroxidase JJQ57_RS11175 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS11175 PF16925 Tetracyclin repressor-like, C-terminal domain JJQ57_RS11180 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS11180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS11185 PF02645 Uncharacterised protein, DegV family COG1307 JJQ57_RS11190 PF13439 Glycosyltransferase Family 4 JJQ57_RS11190 PF00534 Glycosyl transferases group 1 JJQ57_RS11200 PF05506 Domain of unknown function (DUF756) JJQ57_RS11200 PF04185 Phosphoesterase family JJQ57_RS11205 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal JJQ57_RS11205 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal JJQ57_RS11215 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS11215 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS11215 PF00563 EAL domain JJQ57_RS11220 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ57_RS11220 PF00578 AhpC/TSA family JJQ57_RS11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS11235 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS11240 PF18416 N-acetylglucosamine binding protein domain 2 JJQ57_RS11240 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JJQ57_RS11250 PF00206 Lyase JJQ57_RS11250 PF10415 Fumarase C C-terminus JJQ57_RS11265 PF01722 BolA-like protein JJQ57_RS11270 PF00581 Rhodanese-like domain JJQ57_RS11270 PF17773 UPF0176 acylphosphatase like domain JJQ57_RS11280 PF00005 ABC transporter JJQ57_RS11280 PF00664 ABC transporter transmembrane region JJQ57_RS11285 PF00563 EAL domain JJQ57_RS11285 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS11285 PF08448 PAS fold JJQ57_RS11295 PF00550 Phosphopantetheine attachment site JJQ57_RS11295 PF00107 Zinc-binding dehydrogenase JJQ57_RS11295 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS11295 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS11295 PF08659 KR domain JJQ57_RS11295 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS11295 PF00698 Acyl transferase domain JJQ57_RS11295 PF16197 Ketoacyl-synthetase C-terminal extension JJQ57_RS11295 PF14765 Polyketide synthase dehydratase JJQ57_RS11305 PF02311 AraC-like ligand binding domain JJQ57_RS11305 PF12833 Helix-turn-helix domain JJQ57_RS11310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS11315 PF00324 Amino acid permease JJQ57_RS11320 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JJQ57_RS11325 PF00472 RF-1 domain JJQ57_RS11330 PF00768 D-alanyl-D-alanine carboxypeptidase JJQ57_RS11335 PF00155 Aminotransferase class I and II JJQ57_RS11340 PF01329 Pterin 4 alpha carbinolamine dehydratase JJQ57_RS11345 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JJQ57_RS11350 PF00158 Sigma-54 interaction domain JJQ57_RS11350 PF18024 Helix-turn-helix domain JJQ57_RS11360 PF04632 Fusaric acid resistance protein family JJQ57_RS11365 PF03466 LysR substrate binding domain JJQ57_RS11365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS11370 PF03466 LysR substrate binding domain JJQ57_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS11380 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS11380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS11380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS11385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS11390 PF03972 MmgE/PrpD family JJQ57_RS11395 PF02515 CoA-transferase family III JJQ57_RS11400 PF03328 HpcH/HpaI aldolase/citrate lyase family JJQ57_RS11405 PF03480 Bacterial extracellular solute-binding protein, family 7 JJQ57_RS11410 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JJQ57_RS11415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JJQ57_RS11420 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS11420 PF00501 AMP-binding enzyme JJQ57_RS11420 PF16177 Acetyl-coenzyme A synthetase N-terminus JJQ57_RS11425 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS11430 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS11435 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS11445 PF00005 ABC transporter JJQ57_RS11450 PF12833 Helix-turn-helix domain JJQ57_RS11460 PF00202 Aminotransferase class-III JJQ57_RS11465 PF04958 Arginine N-succinyltransferase beta subunit JJQ57_RS11470 PF04958 Arginine N-succinyltransferase beta subunit JJQ57_RS11475 PF00171 Aldehyde dehydrogenase family JJQ57_RS11480 PF04996 Succinylarginine dihydrolase JJQ57_RS11490 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JJQ57_RS11495 PF01212 Beta-eliminating lyase JJQ57_RS11500 PF02272 DHHA1 domain JJQ57_RS11500 PF01411 tRNA synthetases class II (A) JJQ57_RS11500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJQ57_RS11505 PF13840 ACT domain JJQ57_RS11505 PF01842 ACT domain JJQ57_RS11505 PF00696 Amino acid kinase family JJQ57_RS11510 PF02599 Global regulator protein family JJQ57_RS11530 PF01381 Helix-turn-helix JJQ57_RS11530 PF00717 Peptidase S24-like JJQ57_RS11565 PF01769 Divalent cation transporter JJQ57_RS11565 PF03448 MgtE intracellular N domain JJQ57_RS11565 PF00571 CBS domain JJQ57_RS11575 PF07308 Protein of unknown function (DUF1456) JJQ57_RS11580 PF18693 TRAM domain JJQ57_RS11580 PF04055 Radical SAM superfamily JJQ57_RS11580 PF00919 Uncharacterized protein family UPF0004 JJQ57_RS11585 PF02705 K+ potassium transporter JJQ57_RS11590 PF01292 Prokaryotic cytochrome b561 JJQ57_RS11600 PF03706 Lysylphosphatidylglycerol synthase TM region JJQ57_RS11600 PF09924 Uncharacterised conserved protein (DUF2156) JJQ57_RS11620 PF11799 impB/mucB/samB family C-terminal domain JJQ57_RS11620 PF00817 impB/mucB/samB family JJQ57_RS11620 PF11798 IMS family HHH motif JJQ57_RS11645 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS11650 PF05958 tRNA (Uracil-5-)-methyltransferase JJQ57_RS11675 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JJQ57_RS11715 PF00551 Formyl transferase JJQ57_RS11720 PF00586 AIR synthase related protein, N-terminal domain JJQ57_RS11720 PF02769 AIR synthase related protein, C-terminal domain JJQ57_RS11730 PF00308 Bacterial dnaA protein JJQ57_RS11740 PF03358 NADPH-dependent FMN reductase JJQ57_RS11745 PF03960 ArsC family JJQ57_RS11750 PF03631 Virulence factor BrkB JJQ57_RS11765 PF00085 Thioredoxin JJQ57_RS11770 PF00708 Acylphosphatase JJQ57_RS11780 PF04073 Aminoacyl-tRNA editing domain JJQ57_RS11780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ57_RS11780 PF03129 Anticodon binding domain JJQ57_RS11810 PF16750 Sensor domain of 2-component histidine kinase JJQ57_RS11810 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS11810 PF00672 HAMP domain JJQ57_RS11815 PF00072 Response regulator receiver domain JJQ57_RS11815 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS11820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS11820 PF00072 Response regulator receiver domain JJQ57_RS11820 PF01627 Hpt domain JJQ57_RS11820 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS11820 PF00672 HAMP domain JJQ57_RS11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS11825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS11825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS11855 PF00589 Phage integrase family JJQ57_RS11855 PF13495 Phage integrase, N-terminal SAM-like domain JJQ57_RS11865 PF10706 Aminoglycoside-2''-adenylyltransferase JJQ57_RS11870 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS11875 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS11880 PF00186 Dihydrofolate reductase JJQ57_RS11890 PF00893 Small Multidrug Resistance protein JJQ57_RS11895 PF00809 Pterin binding enzyme JJQ57_RS11915 PF00563 EAL domain JJQ57_RS11915 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS11915 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS11915 PF13188 PAS domain JJQ57_RS11920 PF05052 MerE protein JJQ57_RS11925 PF13411 MerR HTH family regulatory protein JJQ57_RS11930 PF00403 Heavy-metal-associated domain JJQ57_RS11930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS11930 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS11935 PF03203 MerC mercury resistance protein JJQ57_RS11940 PF00403 Heavy-metal-associated domain JJQ57_RS11945 PF02411 MerT mercuric transport protein JJQ57_RS11950 PF09278 MerR, DNA binding JJQ57_RS11950 PF00376 MerR family regulatory protein JJQ57_RS12020 PF09317 Domain of unknown function (DUF1974) JJQ57_RS12020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS12020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS12020 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS12030 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS12030 PF13417 Glutathione S-transferase, N-terminal domain JJQ57_RS12035 PF00005 ABC transporter JJQ57_RS12040 PF01061 ABC-2 type transporter JJQ57_RS12045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS12045 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS12045 PF00672 HAMP domain JJQ57_RS12050 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS12050 PF00072 Response regulator receiver domain JJQ57_RS12065 PF14489 QueF-like protein JJQ57_RS12065 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JJQ57_RS12075 PF01966 HD domain JJQ57_RS12085 PF07702 UTRA domain JJQ57_RS12085 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS12095 PF04333 MlaA lipoprotein JJQ57_RS12105 PF00072 Response regulator receiver domain JJQ57_RS12115 PF00923 Transaldolase/Fructose-6-phosphate aldolase JJQ57_RS12120 PF01207 Dihydrouridine synthase (Dus) JJQ57_RS12125 PF00589 Phage integrase family JJQ57_RS12165 PF11112 Pyocin activator protein PrtN JJQ57_RS12185 PF01381 Helix-turn-helix JJQ57_RS12185 PF00717 Peptidase S24-like JJQ57_RS12310 PF17482 Phage tail sheath C-terminal domain JJQ57_RS12310 PF04984 Phage tail sheath protein subtilisin-like domain JJQ57_RS12350 PF00182 Chitinase class I JJQ57_RS12380 PF00857 Isochorismatase family JJQ57_RS12385 PF07690 Major Facilitator Superfamily JJQ57_RS12390 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS12390 PF07729 FCD domain JJQ57_RS12420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS12420 PF02743 Cache domain JJQ57_RS12420 PF00672 HAMP domain JJQ57_RS12425 PF07687 Peptidase dimerisation domain JJQ57_RS12425 PF01546 Peptidase family M20/M25/M40 JJQ57_RS12435 PF13443 Cro/C1-type HTH DNA-binding domain JJQ57_RS12455 PF03358 NADPH-dependent FMN reductase JJQ57_RS12475 PF01226 Formate/nitrite transporter JJQ57_RS12480 PF01266 FAD dependent oxidoreductase JJQ57_RS12490 PF12158 Protein of unknown function (DUF3592) JJQ57_RS12515 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JJQ57_RS12525 PF02567 Phenazine biosynthesis-like protein JJQ57_RS12530 PF00293 NUDIX domain JJQ57_RS12540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS12540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS12540 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS12550 PF04261 Dyp-type peroxidase family JJQ57_RS12585 PF03573 outer membrane porin, OprD family JJQ57_RS12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS12595 PF03466 LysR substrate binding domain JJQ57_RS12610 PF03974 Ecotin JJQ57_RS12635 PF09335 SNARE associated Golgi protein JJQ57_RS12645 PF03631 Virulence factor BrkB JJQ57_RS12670 PF00589 Phage integrase family JJQ57_RS12670 PF02899 Phage integrase, N-terminal SAM-like domain JJQ57_RS12700 PF12791 Anti-sigma factor N-terminus JJQ57_RS12715 PF11202 Phosphoribosyl transferase (PRTase) JJQ57_RS12715 PF15608 PELOTA RNA binding domain JJQ57_RS12730 PF02342 TerD domain JJQ57_RS12735 PF02342 TerD domain JJQ57_RS12745 PF03741 Integral membrane protein TerC family JJQ57_RS12750 PF02342 TerD domain JJQ57_RS12755 PF02342 TerD domain JJQ57_RS12775 PF02595 Glycerate kinase family JJQ57_RS12780 PF13700 Domain of unknown function (DUF4158) JJQ57_RS12780 PF01526 Tn3 transposase DDE domain JJQ57_RS12785 PF02796 Helix-turn-helix domain of resolvase JJQ57_RS12785 PF00239 Resolvase, N terminal domain JJQ57_RS12795 PF00589 Phage integrase family JJQ57_RS12795 PF13495 Phage integrase, N-terminal SAM-like domain JJQ57_RS12800 PF13427 Domain of unknown function (DUF4111) JJQ57_RS12800 PF01909 Nucleotidyltransferase domain JJQ57_RS12810 PF00893 Small Multidrug Resistance protein JJQ57_RS12815 PF00809 Pterin binding enzyme JJQ57_RS12835 PF00005 ABC transporter JJQ57_RS12835 PF00664 ABC transporter transmembrane region JJQ57_RS12860 PF00809 Pterin binding enzyme JJQ57_RS12880 PF00916 Sulfate permease family JJQ57_RS12880 PF01740 STAS domain JJQ57_RS12885 PF00582 Universal stress protein family JJQ57_RS12895 PF06977 SdiA-regulated JJQ57_RS12905 PF13545 Crp-like helix-turn-helix domain JJQ57_RS12905 PF00027 Cyclic nucleotide-binding domain JJQ57_RS12915 PF04116 Fatty acid hydroxylase superfamily JJQ57_RS12925 PF00376 MerR family regulatory protein JJQ57_RS12925 PF09278 MerR, DNA binding JJQ57_RS12930 PF02411 MerT mercuric transport protein JJQ57_RS12935 PF00403 Heavy-metal-associated domain JJQ57_RS12940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS12940 PF00403 Heavy-metal-associated domain JJQ57_RS12945 PF13411 MerR HTH family regulatory protein JJQ57_RS12950 PF05052 MerE protein JJQ57_RS12955 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS12955 PF00563 EAL domain JJQ57_RS12955 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS12975 PF00809 Pterin binding enzyme JJQ57_RS13000 PF00005 ABC transporter JJQ57_RS13000 PF00664 ABC transporter transmembrane region JJQ57_RS13020 PF00809 Pterin binding enzyme JJQ57_RS13045 PF00664 ABC transporter transmembrane region JJQ57_RS13045 PF00005 ABC transporter JJQ57_RS13065 PF00809 Pterin binding enzyme JJQ57_RS13070 PF00893 Small Multidrug Resistance protein JJQ57_RS13080 PF01909 Nucleotidyltransferase domain JJQ57_RS13080 PF13427 Domain of unknown function (DUF4111) JJQ57_RS13085 PF13495 Phage integrase, N-terminal SAM-like domain JJQ57_RS13085 PF00589 Phage integrase family JJQ57_RS13100 PF05544 Proline racemase JJQ57_RS13105 PF00701 Dihydrodipicolinate synthetase family JJQ57_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS13120 PF00005 ABC transporter JJQ57_RS13125 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS13130 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS13135 PF01738 Dienelactone hydrolase family JJQ57_RS13140 PF03466 LysR substrate binding domain JJQ57_RS13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS13145 PF00107 Zinc-binding dehydrogenase JJQ57_RS13145 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS13155 PF01061 ABC-2 type transporter JJQ57_RS13160 PF00437 Type II/IV secretion system protein JJQ57_RS13160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JJQ57_RS13165 PF00482 Type II secretion system (T2SS), protein F JJQ57_RS13170 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS13170 PF08334 Type II secretion system (T2SS), protein G JJQ57_RS13215 PF01242 6-pyruvoyl tetrahydropterin synthase JJQ57_RS13220 PF00158 Sigma-54 interaction domain JJQ57_RS13220 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS13225 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS13225 PF00042 Globin JJQ57_RS13225 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS13240 PF17263 Family of unknown function (DUF5329) JJQ57_RS13265 PF00072 Response regulator receiver domain JJQ57_RS13265 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS13280 PF00672 HAMP domain JJQ57_RS13280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS13285 PF13726 Na+-H+ antiporter family JJQ57_RS13285 PF03553 Na+/H+ antiporter family JJQ57_RS13290 PF00672 HAMP domain JJQ57_RS13290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS13290 PF17200 Single Cache domain 2 JJQ57_RS13295 PF01594 AI-2E family transporter JJQ57_RS13305 PF00361 Proton-conducting membrane transporter JJQ57_RS13310 PF00361 Proton-conducting membrane transporter JJQ57_RS13315 PF00361 Proton-conducting membrane transporter JJQ57_RS13315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JJQ57_RS13320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JJQ57_RS13325 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JJQ57_RS13330 PF12838 4Fe-4S dicluster domain JJQ57_RS13335 PF00146 NADH dehydrogenase JJQ57_RS13340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ57_RS13340 PF00384 Molybdopterin oxidoreductase JJQ57_RS13340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JJQ57_RS13345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JJQ57_RS13345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JJQ57_RS13355 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JJQ57_RS13355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JJQ57_RS13360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JJQ57_RS13365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JJQ57_RS13380 PF00463 Isocitrate lyase family JJQ57_RS13395 PF13673 Acetyltransferase (GNAT) domain JJQ57_RS13400 PF08007 Cupin superfamily protein JJQ57_RS13405 PF08328 Adenylosuccinate lyase C-terminal JJQ57_RS13405 PF00206 Lyase JJQ57_RS13415 PF04356 Protein of unknown function (DUF489) JJQ57_RS13425 PF00293 NUDIX domain JJQ57_RS13430 PF03971 Monomeric isocitrate dehydrogenase JJQ57_RS13435 PF00180 Isocitrate/isopropylmalate dehydrogenase JJQ57_RS13440 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS13445 PF02617 ATP-dependent Clp protease adaptor protein ClpS JJQ57_RS13450 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS13450 PF02861 Clp amino terminal domain, pathogenicity island component JJQ57_RS13450 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS13450 PF17871 AAA lid domain JJQ57_RS13450 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS13455 PF01176 Translation initiation factor 1A / IF-1 JJQ57_RS13460 PF04376 Arginine-tRNA-protein transferase, N terminus JJQ57_RS13460 PF04377 Arginine-tRNA-protein transferase, C terminus JJQ57_RS13465 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JJQ57_RS13470 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS13475 PF01580 FtsK/SpoIIIE family JJQ57_RS13475 PF17854 FtsK alpha domain JJQ57_RS13475 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JJQ57_RS13475 PF09397 Ftsk gamma domain JJQ57_RS13480 PF03548 Outer membrane lipoprotein carrier protein LolA JJQ57_RS13485 PF16193 AAA C-terminal domain JJQ57_RS13485 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS13485 PF12002 MgsA AAA+ ATPase C terminal JJQ57_RS13490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ57_RS13490 PF02403 Seryl-tRNA synthetase N-terminal domain JJQ57_RS13495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS13495 PF10414 Sirohaem synthase dimerisation region JJQ57_RS13495 PF14824 Sirohaem biosynthesis protein central JJQ57_RS13500 PF13409 Glutathione S-transferase, N-terminal domain JJQ57_RS13505 PF02885 Glycosyl transferase family, helical bundle domain JJQ57_RS13505 PF00591 Glycosyl transferase family, a/b domain JJQ57_RS13510 PF04358 DsrC like protein JJQ57_RS13515 PF04077 DsrH like protein JJQ57_RS13520 PF02635 DsrE/DsrF-like family JJQ57_RS13525 PF02635 DsrE/DsrF-like family JJQ57_RS13530 PF01027 Inhibitor of apoptosis-promoting Bax1 JJQ57_RS13545 PF05995 Cysteine dioxygenase type I JJQ57_RS13550 PF03466 LysR substrate binding domain JJQ57_RS13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS13555 PF00296 Luciferase-like monooxygenase JJQ57_RS13560 PF09084 NMT1/THI5 like JJQ57_RS13565 PF00296 Luciferase-like monooxygenase JJQ57_RS13570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS13570 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS13570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS13575 PF09084 NMT1/THI5 like JJQ57_RS13585 PF09084 NMT1/THI5 like JJQ57_RS13595 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS13600 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS13600 PF00072 Response regulator receiver domain JJQ57_RS13605 PF00593 TonB dependent receptor JJQ57_RS13605 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS13615 PF12833 Helix-turn-helix domain JJQ57_RS13615 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS13620 PF01494 FAD binding domain JJQ57_RS13625 PF00072 Response regulator receiver domain JJQ57_RS13625 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS13630 PF08459 UvrC Helix-hairpin-helix N-terminal JJQ57_RS13630 PF01541 GIY-YIG catalytic domain JJQ57_RS13630 PF02151 UvrB/uvrC motif JJQ57_RS13635 PF01066 CDP-alcohol phosphatidyltransferase JJQ57_RS13645 PF00589 Phage integrase family JJQ57_RS13645 PF13356 Arm DNA-binding domain JJQ57_RS13650 PF04261 Dyp-type peroxidase family JJQ57_RS13690 PF00589 Phage integrase family JJQ57_RS13690 PF13495 Phage integrase, N-terminal SAM-like domain JJQ57_RS13705 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS13730 PF13610 DDE domain JJQ57_RS13755 PF02525 Flavodoxin-like fold JJQ57_RS13760 PF03301 Tryptophan 2,3-dioxygenase JJQ57_RS13765 PF00583 Acetyltransferase (GNAT) family JJQ57_RS13770 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS13785 PF00487 Fatty acid desaturase JJQ57_RS13790 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS13790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS13790 PF00672 HAMP domain JJQ57_RS13795 PF00072 Response regulator receiver domain JJQ57_RS13795 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS13795 PF00158 Sigma-54 interaction domain JJQ57_RS13800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS13800 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS13810 PF07828 PA-IL-like protein JJQ57_RS13825 PF01590 GAF domain JJQ57_RS13825 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS13825 PF00360 Phytochrome region JJQ57_RS13825 PF00563 EAL domain JJQ57_RS13845 PF13649 Methyltransferase domain JJQ57_RS13850 PF01740 STAS domain JJQ57_RS13850 PF00916 Sulfate permease family JJQ57_RS13860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS13860 PF00672 HAMP domain JJQ57_RS13885 PF02308 MgtC family JJQ57_RS13890 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS13890 PF00501 AMP-binding enzyme JJQ57_RS13895 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS13895 PF12833 Helix-turn-helix domain JJQ57_RS13900 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS13900 PF00501 AMP-binding enzyme JJQ57_RS13905 PF00106 short chain dehydrogenase JJQ57_RS13910 PF02803 Thiolase, C-terminal domain JJQ57_RS13910 PF00108 Thiolase, N-terminal domain JJQ57_RS13915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS13915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS13915 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS13920 PF03466 LysR substrate binding domain JJQ57_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS13925 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS13925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS13925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS13935 PF03741 Integral membrane protein TerC family JJQ57_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS13945 PF03466 LysR substrate binding domain JJQ57_RS13950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS13955 PF03372 Endonuclease/Exonuclease/phosphatase family JJQ57_RS13965 PF17243 POTRA domain TamA domain 1 JJQ57_RS13965 PF01103 Surface antigen JJQ57_RS13965 PF07244 Surface antigen variable number repeat JJQ57_RS13970 PF04357 TamB, inner membrane protein subunit of TAM complex JJQ57_RS13975 PF01066 CDP-alcohol phosphatidyltransferase JJQ57_RS13980 PF12146 Serine aminopeptidase, S33 JJQ57_RS13980 PF12147 Putative methyltransferase JJQ57_RS13985 PF00782 Dual specificity phosphatase, catalytic domain JJQ57_RS14005 PF00248 Aldo/keto reductase family JJQ57_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14010 PF03466 LysR substrate binding domain JJQ57_RS14015 PF01235 Sodium:alanine symporter family JJQ57_RS14020 PF08534 Redoxin JJQ57_RS14025 PF00155 Aminotransferase class I and II JJQ57_RS14040 PF13533 Biotin-lipoyl like JJQ57_RS14045 PF00873 AcrB/AcrD/AcrF family JJQ57_RS14050 PF00873 AcrB/AcrD/AcrF family JJQ57_RS14055 PF02321 Outer membrane efflux protein JJQ57_RS14065 PF00672 HAMP domain JJQ57_RS14065 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS14065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS14070 PF00072 Response regulator receiver domain JJQ57_RS14070 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS14075 PF02321 Outer membrane efflux protein JJQ57_RS14080 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS14080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS14085 PF00873 AcrB/AcrD/AcrF family JJQ57_RS14090 PF14525 AraC-binding-like domain JJQ57_RS14090 PF12833 Helix-turn-helix domain JJQ57_RS14095 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JJQ57_RS14095 PF00355 Rieske [2Fe-2S] domain JJQ57_RS14100 PF00866 Ring hydroxylating beta subunit JJQ57_RS14105 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS14105 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS14105 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS14110 PF00106 short chain dehydrogenase JJQ57_RS14115 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS14115 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS14115 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS14120 PF00866 Ring hydroxylating beta subunit JJQ57_RS14125 PF00355 Rieske [2Fe-2S] domain JJQ57_RS14125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JJQ57_RS14130 PF14525 AraC-binding-like domain JJQ57_RS14130 PF12833 Helix-turn-helix domain JJQ57_RS14135 PF03466 LysR substrate binding domain JJQ57_RS14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JJQ57_RS14140 PF13378 Enolase C-terminal domain-like JJQ57_RS14145 PF02426 Muconolactone delta-isomerase JJQ57_RS14150 PF00775 Dioxygenase JJQ57_RS14150 PF04444 Catechol dioxygenase N terminus JJQ57_RS14160 PF03573 outer membrane porin, OprD family JJQ57_RS14185 PF07690 Major Facilitator Superfamily JJQ57_RS14190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JJQ57_RS14200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14200 PF03466 LysR substrate binding domain JJQ57_RS14205 PF05163 DinB family JJQ57_RS14210 PF02321 Outer membrane efflux protein JJQ57_RS14215 PF00873 AcrB/AcrD/AcrF family JJQ57_RS14220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS14230 PF00550 Phosphopantetheine attachment site JJQ57_RS14230 PF00698 Acyl transferase domain JJQ57_RS14230 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS14230 PF00107 Zinc-binding dehydrogenase JJQ57_RS14230 PF16197 Ketoacyl-synthetase C-terminal extension JJQ57_RS14230 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS14230 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS14230 PF08659 KR domain JJQ57_RS14230 PF14765 Polyketide synthase dehydratase JJQ57_RS14240 PF12833 Helix-turn-helix domain JJQ57_RS14265 PF00296 Luciferase-like monooxygenase JJQ57_RS14270 PF00034 Cytochrome c JJQ57_RS14275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS14280 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS14280 PF08521 Two-component sensor kinase N-terminal JJQ57_RS14285 PF00072 Response regulator receiver domain JJQ57_RS14285 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS14290 PF02683 Cytochrome C biogenesis protein transmembrane region JJQ57_RS14290 PF11412 Disulphide bond corrector protein DsbC JJQ57_RS14295 PF00578 AhpC/TSA family JJQ57_RS14300 PF13098 Thioredoxin-like domain JJQ57_RS14305 PF00067 Cytochrome P450 JJQ57_RS14315 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS14315 PF14497 Glutathione S-transferase, C-terminal domain JJQ57_RS14320 PF07690 Major Facilitator Superfamily JJQ57_RS14325 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS14330 PF07883 Cupin domain JJQ57_RS14335 PF03466 LysR substrate binding domain JJQ57_RS14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14340 PF04542 Sigma-70 region 2 JJQ57_RS14340 PF08281 Sigma-70, region 4 JJQ57_RS14345 PF16220 Domain of unknown function (DUF4880) JJQ57_RS14345 PF04773 FecR protein JJQ57_RS14350 PF00593 TonB dependent receptor JJQ57_RS14350 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS14365 PF17287 POTRA domain JJQ57_RS14365 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JJQ57_RS14365 PF08479 POTRA domain, ShlB-type JJQ57_RS14370 PF13332 Hemagglutinin repeat JJQ57_RS14370 PF05594 Haemagluttinin repeat JJQ57_RS14370 PF04829 Pre-toxin domain with VENN motif JJQ57_RS14370 PF15526 Novel toxin 21 JJQ57_RS14370 PF05860 haemagglutination activity domain JJQ57_RS14395 PF18624 CDI immunity protein JJQ57_RS14405 PF18624 CDI immunity protein JJQ57_RS14435 PF08241 Methyltransferase domain JJQ57_RS14445 PF11806 Domain of unknown function (DUF3327) JJQ57_RS14445 PF00756 Putative esterase JJQ57_RS14455 PF00158 Sigma-54 interaction domain JJQ57_RS14455 PF18024 Helix-turn-helix domain JJQ57_RS14460 PF07969 Amidohydrolase family JJQ57_RS14465 PF03466 LysR substrate binding domain JJQ57_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14470 PF01597 Glycine cleavage H-protein JJQ57_RS14475 PF02347 Glycine cleavage system P-protein JJQ57_RS14480 PF00464 Serine hydroxymethyltransferase JJQ57_RS14485 PF03315 Serine dehydratase beta chain JJQ57_RS14485 PF03313 Serine dehydratase alpha chain JJQ57_RS14490 PF01571 Aminomethyltransferase folate-binding domain JJQ57_RS14490 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ57_RS14525 PF00403 Heavy-metal-associated domain JJQ57_RS14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14540 PF03466 LysR substrate binding domain JJQ57_RS14545 PF04632 Fusaric acid resistance protein family JJQ57_RS14555 PF13533 Biotin-lipoyl like JJQ57_RS14565 PF03976 Polyphosphate kinase 2 (PPK2) JJQ57_RS14580 PF00975 Thioesterase domain JJQ57_RS14585 PF00668 Condensation domain JJQ57_RS14585 PF00550 Phosphopantetheine attachment site JJQ57_RS14585 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS14585 PF00501 AMP-binding enzyme JJQ57_RS14610 PF03573 outer membrane porin, OprD family JJQ57_RS14615 PF00857 Isochorismatase family JJQ57_RS14620 PF02678 Pirin JJQ57_RS14620 PF05726 Pirin C-terminal cupin domain JJQ57_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14625 PF03466 LysR substrate binding domain JJQ57_RS14630 PF01204 Trehalase JJQ57_RS14640 PF07995 Glucose / Sorbosone dehydrogenase JJQ57_RS14645 PF00202 Aminotransferase class-III JJQ57_RS14650 PF03621 MbtH-like protein JJQ57_RS14655 PF00975 Thioesterase domain JJQ57_RS14665 PF00950 ABC 3 transport family JJQ57_RS14670 PF00005 ABC transporter JJQ57_RS14700 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS14700 PF00668 Condensation domain JJQ57_RS14700 PF00550 Phosphopantetheine attachment site JJQ57_RS14700 PF00501 AMP-binding enzyme JJQ57_RS14705 PF00668 Condensation domain JJQ57_RS14705 PF00668 Condensation domain JJQ57_RS14705 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS14705 PF00501 AMP-binding enzyme JJQ57_RS14705 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS14705 PF00501 AMP-binding enzyme JJQ57_RS14705 PF00550 Phosphopantetheine attachment site JJQ57_RS14705 PF00550 Phosphopantetheine attachment site JJQ57_RS14710 PF07859 alpha/beta hydrolase fold JJQ57_RS14715 PF00593 TonB dependent receptor JJQ57_RS14715 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS14720 PF00005 ABC transporter JJQ57_RS14720 PF00664 ABC transporter transmembrane region JJQ57_RS14725 PF00551 Formyl transferase JJQ57_RS14750 PF02321 Outer membrane efflux protein JJQ57_RS14755 PF00005 ABC transporter JJQ57_RS14755 PF02687 FtsX-like permease family JJQ57_RS14755 PF12704 MacB-like periplasmic core domain JJQ57_RS14760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS14775 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JJQ57_RS14780 PF01804 Penicillin amidase JJQ57_RS14785 PF01475 Ferric uptake regulator family JJQ57_RS14790 PF03466 LysR substrate binding domain JJQ57_RS14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS14795 PF01070 FMN-dependent dehydrogenase JJQ57_RS14810 PF01799 [2Fe-2S] binding domain JJQ57_RS14810 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS14815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS14825 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS14825 PF00072 Response regulator receiver domain JJQ57_RS14840 PF06715 Gp5 C-terminal repeat (3 copies) JJQ57_RS14840 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS14855 PF17871 AAA lid domain JJQ57_RS14855 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS14855 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS14855 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS14865 PF05947 Type VI secretion system, TssF JJQ57_RS14880 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JJQ57_RS14885 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JJQ57_RS14915 PF00158 Sigma-54 interaction domain JJQ57_RS14925 PF03358 NADPH-dependent FMN reductase JJQ57_RS14930 PF00296 Luciferase-like monooxygenase JJQ57_RS14935 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS14935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS14940 PF00158 Sigma-54 interaction domain JJQ57_RS14945 PF03969 AFG1-like ATPase JJQ57_RS14950 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ57_RS14955 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS14960 PF09383 NIL domain JJQ57_RS14960 PF00005 ABC transporter JJQ57_RS14965 PF03180 NLPA lipoprotein JJQ57_RS14970 PF00296 Luciferase-like monooxygenase JJQ57_RS14975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS14975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS14980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS14980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS14980 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS14990 PF00294 pfkB family carbohydrate kinase JJQ57_RS14995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ57_RS14995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ57_RS15000 PF01232 Mannitol dehydrogenase Rossmann domain JJQ57_RS15000 PF08125 Mannitol dehydrogenase C-terminal domain JJQ57_RS15005 PF00005 ABC transporter JJQ57_RS15005 PF08402 TOBE domain JJQ57_RS15010 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15015 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15030 PF02311 AraC-like ligand binding domain JJQ57_RS15030 PF12833 Helix-turn-helix domain JJQ57_RS15045 PF00005 ABC transporter JJQ57_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15060 PF00296 Luciferase-like monooxygenase JJQ57_RS15065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS15065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS15075 PF00171 Aldehyde dehydrogenase family JJQ57_RS15085 PF02447 GntP family permease JJQ57_RS15095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JJQ57_RS15095 PF00356 Bacterial regulatory proteins, lacI family JJQ57_RS15135 PF01266 FAD dependent oxidoreductase JJQ57_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS15140 PF03466 LysR substrate binding domain JJQ57_RS15145 PF00144 Beta-lactamase JJQ57_RS15165 PF07883 Cupin domain JJQ57_RS15165 PF01381 Helix-turn-helix JJQ57_RS15175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ57_RS15185 PF00005 ABC transporter JJQ57_RS15190 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15195 PF01810 LysE type translocator JJQ57_RS15200 PF00668 Condensation domain JJQ57_RS15200 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS15200 PF00501 AMP-binding enzyme JJQ57_RS15200 PF00550 Phosphopantetheine attachment site JJQ57_RS15215 PF00550 Phosphopantetheine attachment site JJQ57_RS15215 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS15215 PF00550 Phosphopantetheine attachment site JJQ57_RS15215 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS15215 PF00501 AMP-binding enzyme JJQ57_RS15215 PF00668 Condensation domain JJQ57_RS15215 PF00501 AMP-binding enzyme JJQ57_RS15215 PF00668 Condensation domain JJQ57_RS15225 PF00704 Glycosyl hydrolases family 18 JJQ57_RS15230 PF07702 UTRA domain JJQ57_RS15230 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS15235 PF02910 Fumarate reductase flavoprotein C-term JJQ57_RS15235 PF00890 FAD binding domain JJQ57_RS15260 PF04966 Carbohydrate-selective porin, OprB family JJQ57_RS15265 PF01011 PQQ enzyme repeat JJQ57_RS15270 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS15270 PF00593 TonB dependent receptor JJQ57_RS15285 PF01435 Peptidase family M48 JJQ57_RS15315 PF03358 NADPH-dependent FMN reductase JJQ57_RS15320 PF01451 Low molecular weight phosphotyrosine protein phosphatase JJQ57_RS15325 PF02040 Arsenical pump membrane protein JJQ57_RS15330 PF01022 Bacterial regulatory protein, arsR family JJQ57_RS15335 PF12833 Helix-turn-helix domain JJQ57_RS15335 PF06719 AraC-type transcriptional regulator N-terminus JJQ57_RS15340 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS15340 PF00107 Zinc-binding dehydrogenase JJQ57_RS15350 PF09278 MerR, DNA binding JJQ57_RS15350 PF00376 MerR family regulatory protein JJQ57_RS15355 PF03717 Penicillin-binding Protein dimerisation domain JJQ57_RS15355 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS15360 PF00583 Acetyltransferase (GNAT) family JJQ57_RS15365 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS15375 PF03992 Antibiotic biosynthesis monooxygenase JJQ57_RS15385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS15385 PF00034 Cytochrome c JJQ57_RS15390 PF00732 GMC oxidoreductase JJQ57_RS15390 PF05199 GMC oxidoreductase JJQ57_RS15395 PF13618 Gluconate 2-dehydrogenase subunit 3 JJQ57_RS15400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS15400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS15410 PF00294 pfkB family carbohydrate kinase JJQ57_RS15420 PF00356 Bacterial regulatory proteins, lacI family JJQ57_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS15425 PF03466 LysR substrate binding domain JJQ57_RS15435 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JJQ57_RS15435 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JJQ57_RS15450 PF00710 Asparaginase, N-terminal JJQ57_RS15450 PF17763 Glutaminase/Asparaginase C-terminal domain JJQ57_RS15455 PF01235 Sodium:alanine symporter family JJQ57_RS15465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS15465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS15470 PF02817 e3 binding domain JJQ57_RS15470 PF00364 Biotin-requiring enzyme JJQ57_RS15470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ57_RS15475 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS15475 PF02780 Transketolase, C-terminal domain JJQ57_RS15480 PF00676 Dehydrogenase E1 component JJQ57_RS15480 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal JJQ57_RS15485 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS15500 PF00890 FAD binding domain JJQ57_RS15510 PF03023 Lipid II flippase MurJ JJQ57_RS15545 PF02563 Polysaccharide biosynthesis/export protein JJQ57_RS15545 PF10531 SLBB domain JJQ57_RS15545 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JJQ57_RS15550 PF00535 Glycosyl transferase family 2 JJQ57_RS15555 PF01050 Mannose-6-phosphate isomerase JJQ57_RS15555 PF00483 Nucleotidyl transferase JJQ57_RS15560 PF02397 Bacterial sugar transferase JJQ57_RS15570 PF03473 MOSC domain JJQ57_RS15570 PF03475 3-alpha domain JJQ57_RS15590 PF12706 Beta-lactamase superfamily domain JJQ57_RS15610 PF00145 C-5 cytosine-specific DNA methylase JJQ57_RS15615 PF03852 DNA mismatch endonuclease Vsr JJQ57_RS15640 PF13556 PucR C-terminal helix-turn-helix domain JJQ57_RS15640 PF17853 GGDEF-like domain JJQ57_RS15640 PF07905 Purine catabolism regulatory protein-like family JJQ57_RS15645 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JJQ57_RS15660 PF03176 MMPL family JJQ57_RS15680 PF01266 FAD dependent oxidoreductase JJQ57_RS15685 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JJQ57_RS15695 PF00743 Flavin-binding monooxygenase-like JJQ57_RS15705 PF13610 DDE domain JJQ57_RS15715 PF00239 Resolvase, N terminal domain JJQ57_RS15715 PF02796 Helix-turn-helix domain of resolvase JJQ57_RS15720 PF13700 Domain of unknown function (DUF4158) JJQ57_RS15720 PF01526 Tn3 transposase DDE domain JJQ57_RS15735 PF08448 PAS fold JJQ57_RS15735 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS15735 PF08447 PAS fold JJQ57_RS15735 PF00563 EAL domain JJQ57_RS15740 PF03764 Elongation factor G, domain IV JJQ57_RS15740 PF00679 Elongation factor G C-terminus JJQ57_RS15740 PF03144 Elongation factor Tu domain 2 JJQ57_RS15740 PF14492 Elongation Factor G, domain II JJQ57_RS15740 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS15745 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS15745 PF00593 TonB dependent receptor JJQ57_RS15750 PF02543 Carbamoyltransferase N-terminus JJQ57_RS15750 PF16861 Carbamoyltransferase C-terminus JJQ57_RS15755 PF12832 MFS_1 like family JJQ57_RS15770 PF00394 Multicopper oxidase JJQ57_RS15770 PF07732 Multicopper oxidase JJQ57_RS15770 PF07731 Multicopper oxidase JJQ57_RS15775 PF05275 Copper resistance protein B precursor (CopB) JJQ57_RS15785 PF00266 Aminotransferase class-V JJQ57_RS15790 PF00005 ABC transporter JJQ57_RS15790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ57_RS15795 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ57_RS15795 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15800 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS15805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS15810 PF00593 TonB dependent receptor JJQ57_RS15810 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS15815 PF03466 LysR substrate binding domain JJQ57_RS15820 PF07690 Major Facilitator Superfamily JJQ57_RS15825 PF03466 LysR substrate binding domain JJQ57_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS15830 PF00484 Carbonic anhydrase JJQ57_RS15835 PF02560 Cyanate lyase C-terminal domain JJQ57_RS15845 PF08281 Sigma-70, region 4 JJQ57_RS15845 PF04542 Sigma-70 region 2 JJQ57_RS15860 PF12833 Helix-turn-helix domain JJQ57_RS15860 PF06719 AraC-type transcriptional regulator N-terminus JJQ57_RS15870 PF01809 Putative membrane protein insertion efficiency factor JJQ57_RS15880 PF00849 RNA pseudouridylate synthase JJQ57_RS15885 PF00375 Sodium:dicarboxylate symporter family JJQ57_RS15890 PF00324 Amino acid permease JJQ57_RS15895 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS15915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS15915 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS15915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS15925 PF08021 Siderophore-interacting FAD-binding domain JJQ57_RS15925 PF04954 Siderophore-interacting protein JJQ57_RS15930 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS15930 PF00155 Aminotransferase class I and II JJQ57_RS15950 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS15950 PF13404 AsnC-type helix-turn-helix domain JJQ57_RS15960 PF13593 SBF-like CPA transporter family (DUF4137) JJQ57_RS15965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS15965 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS15970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS15975 PF00483 Nucleotidyl transferase JJQ57_RS15980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JJQ57_RS15980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JJQ57_RS15980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JJQ57_RS15995 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS15995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS16000 PF00873 AcrB/AcrD/AcrF family JJQ57_RS16010 PF06977 SdiA-regulated JJQ57_RS16015 PF13411 MerR HTH family regulatory protein JJQ57_RS16020 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS16020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS16020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS16025 PF01039 Carboxyl transferase domain JJQ57_RS16035 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS16035 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS16035 PF00364 Biotin-requiring enzyme JJQ57_RS16035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS16040 PF00682 HMGL-like JJQ57_RS16050 PF04209 homogentisate 1,2-dioxygenase JJQ57_RS16055 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS16060 PF13417 Glutathione S-transferase, N-terminal domain JJQ57_RS16065 PF07690 Major Facilitator Superfamily JJQ57_RS16070 PF00158 Sigma-54 interaction domain JJQ57_RS16070 PF00989 PAS fold JJQ57_RS16070 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS16080 PF00106 short chain dehydrogenase JJQ57_RS16085 PF02667 Short chain fatty acid transporter JJQ57_RS16090 PF02803 Thiolase, C-terminal domain JJQ57_RS16090 PF00108 Thiolase, N-terminal domain JJQ57_RS16095 PF01144 Coenzyme A transferase JJQ57_RS16100 PF01144 Coenzyme A transferase JJQ57_RS16105 PF03466 LysR substrate binding domain JJQ57_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS16110 PF00501 AMP-binding enzyme JJQ57_RS16110 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS16130 PF07690 Major Facilitator Superfamily JJQ57_RS16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS16135 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS16140 PF00465 Iron-containing alcohol dehydrogenase JJQ57_RS16150 PF04055 Radical SAM superfamily JJQ57_RS16150 PF13186 Iron-sulfur cluster-binding domain JJQ57_RS16155 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JJQ57_RS16160 PF03070 TENA/THI-4/PQQC family JJQ57_RS16165 PF12706 Beta-lactamase superfamily domain JJQ57_RS16170 PF08042 PqqA family JJQ57_RS16175 PF00171 Aldehyde dehydrogenase family JJQ57_RS16180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS16185 PF01011 PQQ enzyme repeat JJQ57_RS16185 PF13360 PQQ-like domain JJQ57_RS16195 PF00072 Response regulator receiver domain JJQ57_RS16195 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS16200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS16200 PF07730 Histidine kinase JJQ57_RS16200 PF05231 MASE1 JJQ57_RS16210 PF00072 Response regulator receiver domain JJQ57_RS16210 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS16215 PF00892 EamA-like transporter family JJQ57_RS16220 PF09456 RcsC Alpha-Beta-Loop (ABL) JJQ57_RS16220 PF00072 Response regulator receiver domain JJQ57_RS16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS16220 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS16235 PF05193 Peptidase M16 inactive domain JJQ57_RS16235 PF00675 Insulinase (Peptidase family M16) JJQ57_RS16240 PF08019 Phosphoethanolamine transferase EptA/EptB JJQ57_RS16240 PF00884 Sulfatase JJQ57_RS16245 PF05525 Branched-chain amino acid transport protein JJQ57_RS16295 PF00182 Chitinase class I JJQ57_RS16405 PF00574 Clp protease JJQ57_RS16410 PF04860 Phage portal protein JJQ57_RS16420 PF03354 Phage Terminase JJQ57_RS16495 PF03796 DnaB-like helicase C terminal domain JJQ57_RS16495 PF00772 DnaB-like helicase N terminal domain JJQ57_RS16525 PF00717 Peptidase S24-like JJQ57_RS16525 PF01381 Helix-turn-helix JJQ57_RS16530 PF00533 BRCA1 C Terminus (BRCT) domain JJQ57_RS16530 PF01653 NAD-dependent DNA ligase adenylation domain JJQ57_RS16530 PF12826 Helix-hairpin-helix motif JJQ57_RS16530 PF03120 NAD-dependent DNA ligase OB-fold domain JJQ57_RS16530 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JJQ57_RS16595 PF01385 Probable transposase JJQ57_RS16595 PF12323 Helix-turn-helix domain JJQ57_RS16595 PF07282 Putative transposase DNA-binding domain JJQ57_RS16620 PF12684 PDDEXK-like domain of unknown function (DUF3799) JJQ57_RS16620 PF06630 Enterobacterial exodeoxyribonuclease VIII JJQ57_RS16630 PF00436 Single-strand binding protein family JJQ57_RS16690 PF12848 ABC transporter JJQ57_RS16690 PF00005 ABC transporter JJQ57_RS16700 PF02525 Flavodoxin-like fold JJQ57_RS16705 PF03466 LysR substrate binding domain JJQ57_RS16705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS16710 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS16715 PF02673 Bacitracin resistance protein BacA JJQ57_RS16760 PF00294 pfkB family carbohydrate kinase JJQ57_RS16765 PF00356 Bacterial regulatory proteins, lacI family JJQ57_RS16770 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS16775 PF00005 ABC transporter JJQ57_RS16780 PF13407 Periplasmic binding protein domain JJQ57_RS16785 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS16785 PF00158 Sigma-54 interaction domain JJQ57_RS16785 PF00072 Response regulator receiver domain JJQ57_RS16805 PF00199 Catalase JJQ57_RS16835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS16835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JJQ57_RS16840 PF00941 FAD binding domain in molybdopterin dehydrogenase JJQ57_RS16840 PF03450 CO dehydrogenase flavoprotein C-terminal domain JJQ57_RS16845 PF01799 [2Fe-2S] binding domain JJQ57_RS16845 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS16845 PF10518 TAT (twin-arginine translocation) pathway signal sequence JJQ57_RS16850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS16850 PF08447 PAS fold JJQ57_RS16850 PF13426 PAS domain JJQ57_RS16860 PF13302 Acetyltransferase (GNAT) domain JJQ57_RS16865 PF01717 Cobalamin-independent synthase, Catalytic domain JJQ57_RS16865 PF08267 Cobalamin-independent synthase, N-terminal domain JJQ57_RS16870 PF18381 YcaO cyclodehydratase C-terminal domain JJQ57_RS16870 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JJQ57_RS16885 PF02514 CobN/Magnesium Chelatase JJQ57_RS16890 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS16890 PF00593 TonB dependent receptor JJQ57_RS16895 PF01795 MraW methylase family JJQ57_RS16900 PF02867 Ribonucleotide reductase, barrel domain JJQ57_RS16900 PF03477 ATP cone domain JJQ57_RS16900 PF00317 Ribonucleotide reductase, all-alpha domain JJQ57_RS16915 PF01266 FAD dependent oxidoreductase JJQ57_RS16930 PF13556 PucR C-terminal helix-turn-helix domain JJQ57_RS16930 PF07905 Purine catabolism regulatory protein-like family JJQ57_RS16945 PF08281 Sigma-70, region 4 JJQ57_RS16945 PF04542 Sigma-70 region 2 JJQ57_RS16950 PF04773 FecR protein JJQ57_RS16950 PF16220 Domain of unknown function (DUF4880) JJQ57_RS16955 PF00593 TonB dependent receptor JJQ57_RS16955 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS16960 PF03929 PepSY-associated TM region JJQ57_RS16970 PF07690 Major Facilitator Superfamily JJQ57_RS16985 PF01243 Pyridoxamine 5'-phosphate oxidase JJQ57_RS16985 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JJQ57_RS16990 PF02567 Phenazine biosynthesis-like protein JJQ57_RS16995 PF00425 chorismate binding enzyme JJQ57_RS16995 PF00117 Glutamine amidotransferase class-I JJQ57_RS17000 PF00857 Isochorismatase family JJQ57_RS17005 PF01474 Class-II DAHP synthetase family JJQ57_RS17010 PF03284 Phenazine biosynthesis protein A/B JJQ57_RS17015 PF03284 Phenazine biosynthesis protein A/B JJQ57_RS17020 PF03472 Autoinducer binding domain JJQ57_RS17020 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS17045 PF01804 Penicillin amidase JJQ57_RS17060 PF13417 Glutathione S-transferase, N-terminal domain JJQ57_RS17060 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS17080 PF00136 DNA polymerase family B JJQ57_RS17080 PF03104 DNA polymerase family B, exonuclease domain JJQ57_RS17095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JJQ57_RS17100 PF00893 Small Multidrug Resistance protein JJQ57_RS17105 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS17105 PF01799 [2Fe-2S] binding domain JJQ57_RS17110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS17125 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS17125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS17130 PF00005 ABC transporter JJQ57_RS17130 PF03412 Peptidase C39 family JJQ57_RS17130 PF00664 ABC transporter transmembrane region JJQ57_RS17155 PF01551 Peptidase family M23 JJQ57_RS17165 PF00550 Phosphopantetheine attachment site JJQ57_RS17170 PF00263 Bacterial type II and III secretion system protein JJQ57_RS17170 PF03958 Bacterial type II/III secretion system short domain JJQ57_RS17190 PF08774 VRR-NUC domain JJQ57_RS17190 PF18081 Fanconi anemia-associated nuclease SAP domain JJQ57_RS17195 PF08361 MAATS-type transcriptional repressor, C-terminal region JJQ57_RS17195 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS17210 PF00005 ABC transporter JJQ57_RS17210 PF03459 TOBE domain JJQ57_RS17215 PF04072 Leucine carboxyl methyltransferase JJQ57_RS17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS17220 PF03466 LysR substrate binding domain JJQ57_RS17225 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JJQ57_RS17230 PF02386 Cation transport protein JJQ57_RS17235 PF05661 Protein of unknown function (DUF808) JJQ57_RS17240 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS17250 PF01769 Divalent cation transporter JJQ57_RS17250 PF00571 CBS domain JJQ57_RS17250 PF03448 MgtE intracellular N domain JJQ57_RS17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS17255 PF03466 LysR substrate binding domain JJQ57_RS17265 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS17265 PF00563 EAL domain JJQ57_RS17265 PF01590 GAF domain JJQ57_RS17265 PF00360 Phytochrome region JJQ57_RS17270 PF01965 DJ-1/PfpI family JJQ57_RS17270 PF12833 Helix-turn-helix domain JJQ57_RS17275 PF06906 Protein of unknown function (DUF1272) JJQ57_RS17285 PF01106 NifU-like domain JJQ57_RS17285 PF01521 Iron-sulphur cluster biosynthesis JJQ57_RS17305 PF02310 B12 binding domain JJQ57_RS17305 PF02607 B12 binding domain JJQ57_RS17305 PF02574 Homocysteine S-methyltransferase JJQ57_RS17305 PF02965 Vitamin B12 dependent methionine synthase, activation domain JJQ57_RS17305 PF00809 Pterin binding enzyme JJQ57_RS17325 PF04055 Radical SAM superfamily JJQ57_RS17335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ57_RS17335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ57_RS17360 PF00107 Zinc-binding dehydrogenase JJQ57_RS17360 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS17365 PF01343 Peptidase family S49 JJQ57_RS17365 PF08496 Peptidase family S49 N-terminal JJQ57_RS17395 PF03466 LysR substrate binding domain JJQ57_RS17395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS17400 PF00565 Staphylococcal nuclease homologue JJQ57_RS17405 PF01925 Sulfite exporter TauE/SafE JJQ57_RS17410 PF00293 NUDIX domain JJQ57_RS17410 PF09297 NADH pyrophosphatase zinc ribbon domain JJQ57_RS17410 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JJQ57_RS17420 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS17425 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JJQ57_RS17430 PF13520 Amino acid permease JJQ57_RS17435 PF01276 Orn/Lys/Arg decarboxylase, major domain JJQ57_RS17435 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JJQ57_RS17435 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JJQ57_RS17445 PF00929 Exonuclease JJQ57_RS17450 PF00075 RNase H JJQ57_RS17460 PF16123 Hydroxyacylglutathione hydrolase C-terminus JJQ57_RS17460 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS17465 PF01464 Transglycosylase SLT domain JJQ57_RS17465 PF01476 LysM domain JJQ57_RS17470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS17475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS17485 PF12911 N-terminal TM domain of oligopeptide transport permease C JJQ57_RS17490 PF00005 ABC transporter JJQ57_RS17490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JJQ57_RS17500 PF05698 Bacterial trigger factor protein (TF) C-terminus JJQ57_RS17510 PF00216 Bacterial DNA-binding protein JJQ57_RS17515 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS17515 PF05362 Lon protease (S16) C-terminal proteolytic domain JJQ57_RS17515 PF02190 ATP-dependent protease La (LON) substrate-binding domain JJQ57_RS17520 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS17520 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS17520 PF06689 ClpX C4-type zinc finger JJQ57_RS17525 PF00574 Clp protease JJQ57_RS17530 PF05697 Bacterial trigger factor protein (TF) JJQ57_RS17530 PF05698 Bacterial trigger factor protein (TF) C-terminus JJQ57_RS17530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS17535 PF00072 Response regulator receiver domain JJQ57_RS17535 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS17540 PF00672 HAMP domain JJQ57_RS17540 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS17545 PF00144 Beta-lactamase JJQ57_RS17575 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JJQ57_RS17575 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JJQ57_RS17580 PF09190 DALR domain JJQ57_RS17580 PF01406 tRNA synthetases class I (C) catalytic domain JJQ57_RS17585 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JJQ57_RS17585 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ57_RS17590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JJQ57_RS17595 PF00149 Calcineurin-like phosphoesterase JJQ57_RS17605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JJQ57_RS17610 PF00582 Universal stress protein family JJQ57_RS17620 PF11791 Aconitate B N-terminal domain JJQ57_RS17620 PF06434 Aconitate hydratase 2 N-terminus JJQ57_RS17620 PF00330 Aconitase family (aconitate hydratase) JJQ57_RS17630 PF00072 Response regulator receiver domain JJQ57_RS17630 PF01339 CheB methylesterase JJQ57_RS17640 PF07690 Major Facilitator Superfamily JJQ57_RS17645 PF03793 PASTA domain JJQ57_RS17645 PF00069 Protein kinase domain JJQ57_RS17650 PF18267 Rubredoxin NAD+ reductase C-terminal domain JJQ57_RS17650 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS17650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ57_RS17650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS17650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ57_RS17655 PF00355 Rieske [2Fe-2S] domain JJQ57_RS17660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ57_RS17660 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS17660 PF00384 Molybdopterin oxidoreductase JJQ57_RS17660 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS17665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS17670 PF05736 OprF membrane domain JJQ57_RS17670 PF00691 OmpA family JJQ57_RS17680 PF05552 Conserved TM helix JJQ57_RS17690 PF01544 CorA-like Mg2+ transporter protein JJQ57_RS17695 PF03737 Aldolase/RraA JJQ57_RS17705 PF00391 PEP-utilising enzyme, mobile domain JJQ57_RS17705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JJQ57_RS17705 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ57_RS17710 PF03618 Kinase/pyrophosphorylase JJQ57_RS17715 PF08443 RimK-like ATP-grasp domain JJQ57_RS17715 PF18030 RimK PreATP-grasp domain JJQ57_RS17755 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS17755 PF17874 MalT-like TPR region JJQ57_RS17760 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS17760 PF17874 MalT-like TPR region JJQ57_RS17765 PF00425 chorismate binding enzyme JJQ57_RS17765 PF04715 Anthranilate synthase component I, N terminal region JJQ57_RS17775 PF01507 Phosphoadenosine phosphosulfate reductase family JJQ57_RS17785 PF03466 LysR substrate binding domain JJQ57_RS17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS17795 PF02558 Ketopantoate reductase PanE/ApbA JJQ57_RS17795 PF08546 Ketopantoate reductase PanE/ApbA C terminal JJQ57_RS17805 PF00793 DAHP synthetase I family JJQ57_RS17845 PF02540 NAD synthase JJQ57_RS17845 PF00117 Glutamine amidotransferase class-I JJQ57_RS17845 PF00958 GMP synthase C terminal domain JJQ57_RS17860 PF00248 Aldo/keto reductase family JJQ57_RS17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS17865 PF03466 LysR substrate binding domain JJQ57_RS17870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS17870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS17870 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS17875 PF00108 Thiolase, N-terminal domain JJQ57_RS17875 PF02803 Thiolase, C-terminal domain JJQ57_RS17895 PF08379 Bacterial transglutaminase-like N-terminal region JJQ57_RS17895 PF01841 Transglutaminase-like superfamily JJQ57_RS17900 PF04168 A predicted alpha-helical domain with a conserved ER motif. JJQ57_RS17900 PF14403 Circularly permuted ATP-grasp type 2 JJQ57_RS17905 PF14403 Circularly permuted ATP-grasp type 2 JJQ57_RS17920 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS17920 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS17920 PF00563 EAL domain JJQ57_RS17925 PF01915 Glycosyl hydrolase family 3 C-terminal domain JJQ57_RS17925 PF14310 Fibronectin type III-like domain JJQ57_RS17925 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ57_RS17930 PF02108 Flagellar assembly protein FliH JJQ57_RS17935 PF06578 YOP proteins translocation protein K (YscK) JJQ57_RS17940 PF01514 Secretory protein of YscJ/FliF family JJQ57_RS17945 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI JJQ57_RS17955 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) JJQ57_RS17960 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JJQ57_RS17965 PF08988 Type III secretion system, cytoplasmic E component of needle JJQ57_RS17970 PF16697 Inner membrane component of T3SS, cytoplasmic domain JJQ57_RS17970 PF16693 Inner membrane component of T3SS, periplasmic domain JJQ57_RS17975 PF03958 Bacterial type II/III secretion system short domain JJQ57_RS17975 PF00263 Bacterial type II and III secretion system protein JJQ57_RS17980 PF05932 Tir chaperone protein (CesT) family JJQ57_RS17985 PF16806 Antiactivator protein ExsD JJQ57_RS17990 PF12833 Helix-turn-helix domain JJQ57_RS17995 PF09619 Type III secretion system lipoprotein chaperone (YscW) JJQ57_RS18000 PF18286 Type III secretion system ExsE JJQ57_RS18005 PF05932 Tir chaperone protein (CesT) family JJQ57_RS18015 PF04888 Secretion system effector C (SseC) like family JJQ57_RS18020 PF07720 Tetratricopeptide repeat JJQ57_RS18025 PF04792 V antigen (LcrV) protein JJQ57_RS18035 PF09621 Type III secretion system regulator (LcrR) JJQ57_RS18040 PF00771 FHIPEP family JJQ57_RS18060 PF09059 TyeA JJQ57_RS18065 PF07201 HrpJ-like domain JJQ57_RS18070 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ57_RS18070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ57_RS18070 PF18269 T3SS EscN ATPase C-terminal domain JJQ57_RS18085 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ57_RS18090 PF00813 FliP family JJQ57_RS18095 PF01313 Bacterial export proteins, family 3 JJQ57_RS18100 PF01311 Bacterial export proteins, family 1 JJQ57_RS18105 PF01312 FlhB HrpN YscU SpaS Family JJQ57_RS18110 PF00884 Sulfatase JJQ57_RS18110 PF16347 Domain of unknown function (DUF4976) JJQ57_RS18120 PF17284 Spermidine synthase tetramerisation domain JJQ57_RS18125 PF06029 AlkA N-terminal domain JJQ57_RS18125 PF00730 HhH-GPD superfamily base excision DNA repair protein JJQ57_RS18125 PF12833 Helix-turn-helix domain JJQ57_RS18125 PF02805 Metal binding domain of Ada JJQ57_RS18140 PF03079 ARD/ARD' family JJQ57_RS18145 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ57_RS18155 PF01264 Chorismate synthase JJQ57_RS18170 PF05175 Methyltransferase small domain JJQ57_RS18185 PF01713 Smr domain JJQ57_RS18190 PF01227 GTP cyclohydrolase I JJQ57_RS18195 PF01814 Hemerythrin HHE cation binding domain JJQ57_RS18205 PF03793 PASTA domain JJQ57_RS18205 PF00069 Protein kinase domain JJQ57_RS18215 PF06744 Type VI secretion protein IcmF C-terminal JJQ57_RS18215 PF06761 Intracellular multiplication and human macrophage-killing JJQ57_RS18215 PF14331 ImcF-related N-terminal domain JJQ57_RS18225 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JJQ57_RS18245 PF00158 Sigma-54 interaction domain JJQ57_RS18245 PF00072 Response regulator receiver domain JJQ57_RS18245 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS18250 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS18250 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS18250 PF17871 AAA lid domain JJQ57_RS18250 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS18260 PF05947 Type VI secretion system, TssF JJQ57_RS18275 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JJQ57_RS18290 PF05638 Type VI secretion system effector, Hcp JJQ57_RS18295 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS18315 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS18320 PF00155 Aminotransferase class I and II JJQ57_RS18335 PF03594 Benzoate membrane transport protein JJQ57_RS18350 PF00107 Zinc-binding dehydrogenase JJQ57_RS18350 PF16884 N-terminal domain of oxidoreductase JJQ57_RS18355 PF00916 Sulfate permease family JJQ57_RS18355 PF01740 STAS domain JJQ57_RS18360 PF16591 Helical bimodular sensor domain JJQ57_RS18360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS18360 PF00672 HAMP domain JJQ57_RS18370 PF01613 Flavin reductase like domain JJQ57_RS18385 PF02769 AIR synthase related protein, C-terminal domain JJQ57_RS18385 PF00586 AIR synthase related protein, N-terminal domain JJQ57_RS18395 PF01734 Patatin-like phospholipase JJQ57_RS18405 PF04960 Glutaminase JJQ57_RS18410 PF00072 Response regulator receiver domain JJQ57_RS18410 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS18415 PF02702 Osmosensitive K+ channel His kinase sensor domain JJQ57_RS18415 PF13492 GAF domain JJQ57_RS18415 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS18415 PF13493 Domain of unknown function (DUF4118) JJQ57_RS18420 PF02669 K+-transporting ATPase, c chain JJQ57_RS18430 PF03814 Potassium-transporting ATPase A subunit JJQ57_RS18440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS18440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS18440 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS18445 PF09339 IclR helix-turn-helix domain JJQ57_RS18450 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS18455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS18455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS18455 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JJQ57_RS18460 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS18460 PF07729 FCD domain JJQ57_RS18465 PF07690 Major Facilitator Superfamily JJQ57_RS18470 PF01594 AI-2E family transporter JJQ57_RS18480 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS18480 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS18500 PF12833 Helix-turn-helix domain JJQ57_RS18500 PF02311 AraC-like ligand binding domain JJQ57_RS18505 PF03061 Thioesterase superfamily JJQ57_RS18695 PF02371 Transposase IS116/IS110/IS902 family JJQ57_RS18695 PF01548 Transposase JJQ57_RS18710 PF04002 RadC-like JAB domain JJQ57_RS18760 PF17755 UvrA DNA-binding domain JJQ57_RS18765 PF06965 Na+/H+ antiporter 1 JJQ57_RS18765 PF13462 Thioredoxin JJQ57_RS18770 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS18770 PF16193 AAA C-terminal domain JJQ57_RS18770 PF12002 MgsA AAA+ ATPase C terminal JJQ57_RS18775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS18780 PF00756 Putative esterase JJQ57_RS18795 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS18795 PF00107 Zinc-binding dehydrogenase JJQ57_RS18800 PF02583 Metal-sensitive transcriptional repressor JJQ57_RS18825 PF12344 Ultra-violet resistance protein B JJQ57_RS18825 PF00271 Helicase conserved C-terminal domain JJQ57_RS18825 PF17757 UvrB interaction domain JJQ57_RS18825 PF04851 Type III restriction enzyme, res subunit JJQ57_RS18825 PF02151 UvrB/uvrC motif JJQ57_RS18835 PF03466 LysR substrate binding domain JJQ57_RS18835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS18840 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS18845 PF03466 LysR substrate binding domain JJQ57_RS18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS18860 PF04261 Dyp-type peroxidase family JJQ57_RS18865 PF00589 Phage integrase family JJQ57_RS18865 PF13356 Arm DNA-binding domain JJQ57_RS18885 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS18885 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS18890 PF13185 GAF domain JJQ57_RS18895 PF05491 RuvB C-terminal winged helix domain JJQ57_RS18895 PF17864 RuvB AAA lid domain JJQ57_RS18895 PF05496 Holliday junction DNA helicase RuvB P-loop domain JJQ57_RS18900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS18900 PF01627 Hpt domain JJQ57_RS18900 PF00072 Response regulator receiver domain JJQ57_RS18900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS18900 PF00672 HAMP domain JJQ57_RS18900 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS18905 PF01047 MarR family JJQ57_RS18910 PF00255 Glutathione peroxidase JJQ57_RS18915 PF01641 SelR domain JJQ57_RS18920 PF00155 Aminotransferase class I and II JJQ57_RS18930 PF01435 Peptidase family M48 JJQ57_RS18935 PF00246 Zinc carboxypeptidase JJQ57_RS18935 PF18027 Cytosolic carboxypeptidase N-terminal domain JJQ57_RS18940 PF05724 Thiopurine S-methyltransferase (TPMT) JJQ57_RS18945 PF00582 Universal stress protein family JJQ57_RS18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS18950 PF03466 LysR substrate binding domain JJQ57_RS18955 PF07690 Major Facilitator Superfamily JJQ57_RS18960 PF13533 Biotin-lipoyl like JJQ57_RS18965 PF02321 Outer membrane efflux protein JJQ57_RS18970 PF03466 LysR substrate binding domain JJQ57_RS18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS18975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JJQ57_RS18980 PF03880 DbpA RNA binding domain JJQ57_RS18980 PF00271 Helicase conserved C-terminal domain JJQ57_RS18980 PF00270 DEAD/DEAH box helicase JJQ57_RS18985 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS18995 PF01474 Class-II DAHP synthetase family JJQ57_RS19000 PF06224 Winged helix DNA-binding domain JJQ57_RS19010 PF03466 LysR substrate binding domain JJQ57_RS19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19020 PF03466 LysR substrate binding domain JJQ57_RS19020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19025 PF01047 MarR family JJQ57_RS19030 PF02566 OsmC-like protein JJQ57_RS19035 PF09285 Elongation factor P, C-terminal JJQ57_RS19035 PF08207 Elongation factor P (EF-P) KOW-like domain JJQ57_RS19035 PF01132 Elongation factor P (EF-P) OB domain JJQ57_RS19050 PF11839 Alanine-zipper, major outer membrane lipoprotein JJQ57_RS19055 PF17969 L,D-transpeptidase C-terminal domain JJQ57_RS19055 PF03734 L,D-transpeptidase catalytic domain JJQ57_RS19065 PF13472 GDSL-like Lipase/Acylhydrolase family JJQ57_RS19070 PF00005 ABC transporter JJQ57_RS19080 PF03449 Transcription elongation factor, N-terminal JJQ57_RS19080 PF01272 Transcription elongation factor, GreA/GreB, C-term JJQ57_RS19090 PF02834 LigT like Phosphoesterase JJQ57_RS19095 PF00561 alpha/beta hydrolase fold JJQ57_RS19100 PF03280 Proteobacterial lipase chaperone protein JJQ57_RS19105 PF07681 DoxX JJQ57_RS19110 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS19110 PF01464 Transglycosylase SLT domain JJQ57_RS19115 PF01026 TatD related DNase JJQ57_RS19120 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS19120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS19120 PF00672 HAMP domain JJQ57_RS19135 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS19150 PF13559 Domain of unknown function (DUF4129) JJQ57_RS19150 PF01841 Transglutaminase-like superfamily JJQ57_RS19150 PF11992 Domain of unknown function (DUF3488) JJQ57_RS19160 PF17863 AAA lid domain JJQ57_RS19160 PF07726 ATPase family associated with various cellular activities (AAA) JJQ57_RS19165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JJQ57_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19170 PF03466 LysR substrate binding domain JJQ57_RS19180 PF03466 LysR substrate binding domain JJQ57_RS19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19190 PF00158 Sigma-54 interaction domain JJQ57_RS19190 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS19190 PF00072 Response regulator receiver domain JJQ57_RS19195 PF13188 PAS domain JJQ57_RS19195 PF08448 PAS fold JJQ57_RS19195 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS19195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS19195 PF00072 Response regulator receiver domain JJQ57_RS19210 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS19210 PF17932 Tetracyclin repressor-like, C-terminal domain JJQ57_RS19225 PF01039 Carboxyl transferase domain JJQ57_RS19230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS19230 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS19230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS19235 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS19240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS19240 PF00364 Biotin-requiring enzyme JJQ57_RS19240 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS19240 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS19250 PF00501 AMP-binding enzyme JJQ57_RS19250 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS19265 PF08281 Sigma-70, region 4 JJQ57_RS19265 PF04542 Sigma-70 region 2 JJQ57_RS19270 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS19270 PF00155 Aminotransferase class I and II JJQ57_RS19280 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS19280 PF00072 Response regulator receiver domain JJQ57_RS19285 PF05736 OprF membrane domain JJQ57_RS19285 PF00691 OmpA family JJQ57_RS19300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS19305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS19310 PF02570 Precorrin-8X methylmutase JJQ57_RS19315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ57_RS19315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ57_RS19320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS19325 PF01888 CbiD JJQ57_RS19330 PF02571 Precorrin-6x reductase CbiJ/CobK JJQ57_RS19335 PF02659 Putative manganese efflux pump JJQ57_RS19340 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS19340 PF00593 TonB dependent receptor JJQ57_RS19345 PF00005 ABC transporter JJQ57_RS19355 PF01032 FecCD transport family JJQ57_RS19360 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS19385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS19385 PF00672 HAMP domain JJQ57_RS19390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19390 PF03466 LysR substrate binding domain JJQ57_RS19395 PF07687 Peptidase dimerisation domain JJQ57_RS19395 PF01546 Peptidase family M20/M25/M40 JJQ57_RS19400 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS19405 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS19410 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS19415 PF00005 ABC transporter JJQ57_RS19440 PF03466 LysR substrate binding domain JJQ57_RS19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS19445 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS19450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS19455 PF07690 Major Facilitator Superfamily JJQ57_RS19460 PF00561 alpha/beta hydrolase fold JJQ57_RS19475 PF00860 Permease family JJQ57_RS19480 PF04389 Peptidase family M28 JJQ57_RS19480 PF02225 PA domain JJQ57_RS19485 PF02803 Thiolase, C-terminal domain JJQ57_RS19485 PF00108 Thiolase, N-terminal domain JJQ57_RS19495 PF13519 von Willebrand factor type A domain JJQ57_RS19495 PF17863 AAA lid domain JJQ57_RS19495 PF07728 AAA domain (dynein-related subfamily) JJQ57_RS19500 PF00793 DAHP synthetase I family JJQ57_RS19505 PF02514 CobN/Magnesium Chelatase JJQ57_RS19510 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ57_RS19510 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ57_RS19525 PF11760 Cobalamin synthesis G N-terminal JJQ57_RS19525 PF11761 Cobalamin biosynthesis central region JJQ57_RS19525 PF01890 Cobalamin synthesis G C-terminus JJQ57_RS19530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS19535 PF00561 alpha/beta hydrolase fold JJQ57_RS19540 PF12241 Trans-2-enoyl-CoA reductase catalytic region JJQ57_RS19540 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JJQ57_RS19540 PF07055 Enoyl reductase FAD binding domain JJQ57_RS19545 PF01012 Electron transfer flavoprotein domain JJQ57_RS19545 PF00766 Electron transfer flavoprotein FAD-binding domain JJQ57_RS19550 PF01012 Electron transfer flavoprotein domain JJQ57_RS19575 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS19580 PF00266 Aminotransferase class-V JJQ57_RS19585 PF01026 TatD related DNase JJQ57_RS19595 PF09115 DNA polymerase III, delta subunit, C terminal JJQ57_RS19600 PF02223 Thymidylate kinase JJQ57_RS19605 PF02618 YceG-like family JJQ57_RS19610 PF01063 Amino-transferase class IV JJQ57_RS19615 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS19615 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS19620 PF00550 Phosphopantetheine attachment site JJQ57_RS19630 PF00698 Acyl transferase domain JJQ57_RS19635 PF02504 Fatty acid synthesis protein JJQ57_RS19640 PF01783 Ribosomal L32p protein family JJQ57_RS19645 PF02620 Large ribosomal RNA subunit accumulation protein YceD JJQ57_RS19650 PF02545 Maf-like protein JJQ57_RS19655 PF01343 Peptidase family S49 JJQ57_RS19655 PF06965 Na+/H+ antiporter 1 JJQ57_RS19660 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS19665 PF00849 RNA pseudouridylate synthase JJQ57_RS19665 PF01479 S4 domain JJQ57_RS19670 PF00575 S1 RNA binding domain JJQ57_RS19670 PF10150 Ribonuclease E/G family JJQ57_RS19670 PF12111 Polyribonucleotide phosphorylase C terminal JJQ57_RS19675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JJQ57_RS19675 PF01565 FAD binding domain JJQ57_RS19680 PF01451 Low molecular weight phosphotyrosine protein phosphatase JJQ57_RS19685 PF02348 Cytidylyltransferase JJQ57_RS19690 PF03966 Trm112p-like protein JJQ57_RS19695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JJQ57_RS19700 PF02472 Biopolymer transport protein ExbD/TolR JJQ57_RS19705 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS19710 PF13567 Domain of unknown function (DUF4131) JJQ57_RS19710 PF03772 Competence protein JJQ57_RS19710 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS19720 PF12704 MacB-like periplasmic core domain JJQ57_RS19720 PF02687 FtsX-like permease family JJQ57_RS19725 PF00005 ABC transporter JJQ57_RS19730 PF12704 MacB-like periplasmic core domain JJQ57_RS19730 PF02687 FtsX-like permease family JJQ57_RS19745 PF03009 Glycerophosphoryl diester phosphodiesterase family JJQ57_RS19750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS19750 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS19760 PF02424 ApbE family JJQ57_RS19765 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS19765 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS19765 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS19770 PF02508 Rnf-Nqr subunit, membrane protein JJQ57_RS19775 PF02508 Rnf-Nqr subunit, membrane protein JJQ57_RS19780 PF04205 FMN-binding domain JJQ57_RS19785 PF03116 NQR2, RnfD, RnfE family JJQ57_RS19790 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JJQ57_RS19790 PF11973 NQRA C-terminal domain JJQ57_RS19795 PF00324 Amino acid permease JJQ57_RS19800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ57_RS19800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ57_RS19805 PF00270 DEAD/DEAH box helicase JJQ57_RS19805 PF00271 Helicase conserved C-terminal domain JJQ57_RS19805 PF03461 TRCF domain JJQ57_RS19805 PF02559 CarD-like/TRCF domain JJQ57_RS19805 PF17757 UvrB interaction domain JJQ57_RS19815 PF01048 Phosphorylase superfamily JJQ57_RS19820 PF00933 Glycosyl hydrolase family 3 N terminal domain JJQ57_RS19825 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS19830 PF01726 LexA DNA binding domain JJQ57_RS19830 PF00717 Peptidase S24-like JJQ57_RS19835 PF03846 Cell division inhibitor SulA JJQ57_RS19850 PF01131 DNA topoisomerase JJQ57_RS19850 PF01751 Toprim domain JJQ57_RS19850 PF08272 Topoisomerase I zinc-ribbon-like JJQ57_RS19850 PF01396 Topoisomerase DNA binding C4 zinc finger JJQ57_RS19860 PF02803 Thiolase, C-terminal domain JJQ57_RS19860 PF00108 Thiolase, N-terminal domain JJQ57_RS19865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS19865 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS19865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS19880 PF00582 Universal stress protein family JJQ57_RS19890 PF12848 ABC transporter JJQ57_RS19890 PF16326 ABC transporter C-terminal domain JJQ57_RS19890 PF00005 ABC transporter JJQ57_RS19895 PF01464 Transglycosylase SLT domain JJQ57_RS19895 PF14718 Soluble lytic murein transglycosylase L domain JJQ57_RS19910 PF00781 Diacylglycerol kinase catalytic domain JJQ57_RS19915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ57_RS19915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ57_RS19920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JJQ57_RS19920 PF01266 FAD dependent oxidoreductase JJQ57_RS19935 PF03454 MoeA C-terminal region (domain IV) JJQ57_RS19935 PF03453 MoeA N-terminal region (domain I and II) JJQ57_RS19935 PF00994 Probable molybdopterin binding domain JJQ57_RS19940 PF00994 Probable molybdopterin binding domain JJQ57_RS19945 PF12804 MobA-like NTP transferase domain JJQ57_RS19970 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS19975 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS19985 PF16123 Hydroxyacylglutathione hydrolase C-terminus JJQ57_RS19985 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS19990 PF03573 outer membrane porin, OprD family JJQ57_RS19995 PF00909 Ammonium Transporter Family JJQ57_RS20015 PF01966 HD domain JJQ57_RS20020 PF00072 Response regulator receiver domain JJQ57_RS20020 PF00989 PAS fold JJQ57_RS20020 PF01627 Hpt domain JJQ57_RS20020 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS20020 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS20025 PF00072 Response regulator receiver domain JJQ57_RS20025 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS20030 PF04320 Protein with unknown function (DUF469) JJQ57_RS20035 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JJQ57_RS20040 PF01170 Putative RNA methylase family UPF0020 JJQ57_RS20040 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ57_RS20040 PF02926 THUMP domain JJQ57_RS20045 PF04957 Ribosome modulation factor JJQ57_RS20050 PF01180 Dihydroorotate dehydrogenase JJQ57_RS20065 PF00561 alpha/beta hydrolase fold JJQ57_RS20095 PF13439 Glycosyltransferase Family 4 JJQ57_RS20095 PF00534 Glycosyl transferases group 1 JJQ57_RS20120 PF03537 Glycoside-hydrolase family GH114 JJQ57_RS20125 PF05088 Bacterial NAD-glutamate dehydrogenase JJQ57_RS20135 PF17863 AAA lid domain JJQ57_RS20135 PF07726 ATPase family associated with various cellular activities (AAA) JJQ57_RS20140 PF01882 Protein of unknown function DUF58 JJQ57_RS20170 PF03797 Autotransporter beta-domain JJQ57_RS20170 PF00082 Subtilase family JJQ57_RS20175 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS20175 PF00072 Response regulator receiver domain JJQ57_RS20180 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS20180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS20195 PF07044 Protein of unknown function (DUF1329) JJQ57_RS20205 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JJQ57_RS20205 PF11940 Domain of unknown function (DUF3458) Ig-like fold JJQ57_RS20205 PF01433 Peptidase family M1 domain JJQ57_RS20215 PF07023 Protein of unknown function (DUF1315) JJQ57_RS20220 PF01694 Rhomboid family JJQ57_RS20220 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JJQ57_RS20225 PF00149 Calcineurin-like phosphoesterase JJQ57_RS20230 PF01513 ATP-NAD kinase JJQ57_RS20250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS20250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS20260 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS20260 PF12833 Helix-turn-helix domain JJQ57_RS20280 PF04612 Type II secretion system (T2SS), protein M JJQ57_RS20285 PF12693 GspL periplasmic domain JJQ57_RS20285 PF05134 Type II secretion system (T2SS), protein L JJQ57_RS20290 PF03934 Type II secretion system (T2SS), protein K JJQ57_RS20295 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS20295 PF11612 Type II secretion system (T2SS), protein J JJQ57_RS20300 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS20300 PF02501 Type II secretion system (T2SS), protein I JJQ57_RS20305 PF12019 Type II transport protein GspH JJQ57_RS20305 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS20310 PF08334 Type II secretion system (T2SS), protein G JJQ57_RS20310 PF07963 Prokaryotic N-terminal methylation motif JJQ57_RS20315 PF00482 Type II secretion system (T2SS), protein F JJQ57_RS20320 PF00437 Type II/IV secretion system protein JJQ57_RS20325 PF11356 Type II secretion system protein C JJQ57_RS20330 PF00263 Bacterial type II and III secretion system protein JJQ57_RS20330 PF03958 Bacterial type II/III secretion system short domain JJQ57_RS20340 PF01053 Cys/Met metabolism PLP-dependent enzyme JJQ57_RS20345 PF00156 Phosphoribosyl transferase domain JJQ57_RS20350 PF02674 Colicin V production protein JJQ57_RS20355 PF05036 Sporulation related domain JJQ57_RS20360 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS20360 PF08245 Mur ligase middle domain JJQ57_RS20365 PF17848 Acetyl-coA carboxylase zinc finger domain JJQ57_RS20365 PF01039 Carboxyl transferase domain JJQ57_RS20370 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JJQ57_RS20375 PF01416 tRNA pseudouridine synthase JJQ57_RS20385 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ57_RS20385 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ57_RS20390 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ57_RS20390 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ57_RS20395 PF00180 Isocitrate/isopropylmalate dehydrogenase JJQ57_RS20400 PF08241 Methyltransferase domain JJQ57_RS20405 PF00694 Aconitase C-terminal domain JJQ57_RS20410 PF00330 Aconitase family (aconitate hydratase) JJQ57_RS20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS20420 PF01042 Endoribonuclease L-PSP JJQ57_RS20425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS20425 PF03466 LysR substrate binding domain JJQ57_RS20435 PF00011 Hsp20/alpha crystallin family JJQ57_RS20440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS20450 PF01207 Dihydrouridine synthase (Dus) JJQ57_RS20460 PF01081 KDPG and KHG aldolase JJQ57_RS20465 PF00561 alpha/beta hydrolase fold JJQ57_RS20495 PF00749 tRNA synthetases class I (E and Q), catalytic domain JJQ57_RS20500 PF03466 LysR substrate binding domain JJQ57_RS20500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS20505 PF13533 Biotin-lipoyl like JJQ57_RS20510 PF07690 Major Facilitator Superfamily JJQ57_RS20515 PF02151 UvrB/uvrC motif JJQ57_RS20515 PF04851 Type III restriction enzyme, res subunit JJQ57_RS20515 PF12344 Ultra-violet resistance protein B JJQ57_RS20515 PF00271 Helicase conserved C-terminal domain JJQ57_RS20515 PF17757 UvrB interaction domain JJQ57_RS20520 PF00155 Aminotransferase class I and II JJQ57_RS20535 PF02719 Polysaccharide biosynthesis protein JJQ57_RS20540 PF00953 Glycosyl transferase family 4 JJQ57_RS20545 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS20550 PF13579 Glycosyl transferase 4-like domain JJQ57_RS20555 PF02350 UDP-N-acetylglucosamine 2-epimerase JJQ57_RS20560 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS20565 PF08485 Polysaccharide biosynthesis protein C-terminal JJQ57_RS20565 PF02719 Polysaccharide biosynthesis protein JJQ57_RS20575 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 JJQ57_RS20575 PF00535 Glycosyl transferase family 2 JJQ57_RS20595 PF00501 AMP-binding enzyme JJQ57_RS20610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JJQ57_RS20610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JJQ57_RS20615 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS20615 PF00593 TonB dependent receptor JJQ57_RS20625 PF00672 HAMP domain JJQ57_RS20625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS20625 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS20625 PF01627 Hpt domain JJQ57_RS20625 PF00072 Response regulator receiver domain JJQ57_RS20625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS20630 PF07977 FabA-like domain JJQ57_RS20635 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS20635 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS20640 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS20640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS20640 PF00672 HAMP domain JJQ57_RS20645 PF01638 HxlR-like helix-turn-helix JJQ57_RS20665 PF12802 MarR family JJQ57_RS20675 PF00034 Cytochrome c JJQ57_RS20675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS20675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS20680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS20680 PF00034 Cytochrome c JJQ57_RS20680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS20685 PF12833 Helix-turn-helix domain JJQ57_RS20685 PF02311 AraC-like ligand binding domain JJQ57_RS20690 PF02548 Ketopantoate hydroxymethyltransferase JJQ57_RS20700 PF00183 Hsp90 protein JJQ57_RS20700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS20730 PF05525 Branched-chain amino acid transport protein JJQ57_RS20735 PF00549 CoA-ligase JJQ57_RS20735 PF02629 CoA binding domain JJQ57_RS20740 PF00549 CoA-ligase JJQ57_RS20740 PF08442 ATP-grasp domain JJQ57_RS20745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JJQ57_RS20745 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS20750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ57_RS20750 PF00364 Biotin-requiring enzyme JJQ57_RS20750 PF02817 e3 binding domain JJQ57_RS20755 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS20755 PF16078 2-oxoglutarate dehydrogenase N-terminus JJQ57_RS20755 PF00676 Dehydrogenase E1 component JJQ57_RS20755 PF16870 2-oxoglutarate dehydrogenase C-terminal JJQ57_RS20760 PF13085 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS20765 PF00890 FAD binding domain JJQ57_RS20765 PF02910 Fumarate reductase flavoprotein C-term JJQ57_RS20770 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JJQ57_RS20775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JJQ57_RS20780 PF00285 Citrate synthase, C-terminal domain JJQ57_RS20785 PF01852 START domain JJQ57_RS20790 PF03692 Putative zinc- or iron-chelating domain JJQ57_RS20805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ57_RS20805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ57_RS20815 PF06865 Pyrimidine/purine nucleoside phosphorylase JJQ57_RS20820 PF06940 Domain of unknown function (DUF1287) JJQ57_RS20835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS20835 PF03466 LysR substrate binding domain JJQ57_RS20845 PF01042 Endoribonuclease L-PSP JJQ57_RS20850 PF01266 FAD dependent oxidoreductase JJQ57_RS20860 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS20865 PF01266 FAD dependent oxidoreductase JJQ57_RS20870 PF01206 Sulfurtransferase TusA JJQ57_RS20875 PF18125 RlmM ferredoxin-like domain JJQ57_RS20875 PF01728 FtsJ-like methyltransferase JJQ57_RS20880 PF00330 Aconitase family (aconitate hydratase) JJQ57_RS20880 PF00694 Aconitase C-terminal domain JJQ57_RS20885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS20885 PF08447 PAS fold JJQ57_RS20900 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS20915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS20915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JJQ57_RS20920 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS20935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS20935 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JJQ57_RS20940 PF13746 4Fe-4S dicluster domain JJQ57_RS20940 PF12801 4Fe-4S binding domain JJQ57_RS20940 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JJQ57_RS20950 PF00403 Heavy-metal-associated domain JJQ57_RS20965 PF06969 HemN C-terminal domain JJQ57_RS20965 PF04055 Radical SAM superfamily JJQ57_RS20975 PF00027 Cyclic nucleotide-binding domain JJQ57_RS20975 PF00325 Bacterial regulatory proteins, crp family JJQ57_RS20980 PF00156 Phosphoribosyl transferase domain JJQ57_RS20990 PF00893 Small Multidrug Resistance protein JJQ57_RS20995 PF00893 Small Multidrug Resistance protein JJQ57_RS21005 PF00743 Flavin-binding monooxygenase-like JJQ57_RS21010 PF00106 short chain dehydrogenase JJQ57_RS21015 PF03691 Uncharacterised protein family (UPF0167) JJQ57_RS21020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS21020 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS21020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS21025 PF02132 RecR protein JJQ57_RS21025 PF13662 Toprim domain JJQ57_RS21030 PF02575 YbaB/EbfC DNA-binding family JJQ57_RS21035 PF12169 DNA polymerase III subunits gamma and tau domain III JJQ57_RS21035 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JJQ57_RS21035 PF12170 DNA polymerase III tau subunit V interacting with alpha JJQ57_RS21055 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JJQ57_RS21055 PF12826 Helix-hairpin-helix motif JJQ57_RS21055 PF01653 NAD-dependent DNA ligase adenylation domain JJQ57_RS21055 PF03120 NAD-dependent DNA ligase OB-fold domain JJQ57_RS21055 PF00533 BRCA1 C Terminus (BRCT) domain JJQ57_RS21060 PF04354 ZipA, C-terminal FtsZ-binding domain JJQ57_RS21065 PF06470 SMC proteins Flexible Hinge Domain JJQ57_RS21065 PF02463 RecF/RecN/SMC N terminal domain JJQ57_RS21075 PF00487 Fatty acid desaturase JJQ57_RS21080 PF01799 [2Fe-2S] binding domain JJQ57_RS21080 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS21085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JJQ57_RS21085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JJQ57_RS21095 PF01979 Amidohydrolase family JJQ57_RS21105 PF00860 Permease family JJQ57_RS21110 PF00576 HIUase/Transthyretin family JJQ57_RS21115 PF01522 Polysaccharide deacetylase JJQ57_RS21125 PF03561 Allantoicase repeat JJQ57_RS21130 PF04115 Ureidoglycolate lyase JJQ57_RS21140 PF05638 Type VI secretion system effector, Hcp JJQ57_RS21145 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS21145 PF13296 Putative type VI secretion system Rhs element Vgr JJQ57_RS21145 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JJQ57_RS21165 PF00860 Permease family JJQ57_RS21175 PF06463 Molybdenum Cofactor Synthesis C JJQ57_RS21175 PF04055 Radical SAM superfamily JJQ57_RS21180 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS21180 PF08362 YcdC-like protein, C-terminal region JJQ57_RS21190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS21190 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS21190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS21195 PF01261 Xylose isomerase-like TIM barrel JJQ57_RS21200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ57_RS21200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ57_RS21205 PF13660 Domain of unknown function (DUF4147) JJQ57_RS21205 PF05161 MOFRL family JJQ57_RS21210 PF02887 Pyruvate kinase, alpha/beta domain JJQ57_RS21210 PF00224 Pyruvate kinase, barrel domain JJQ57_RS21215 PF03253 Urea transporter JJQ57_RS21220 PF00027 Cyclic nucleotide-binding domain JJQ57_RS21220 PF00520 Ion transport protein JJQ57_RS21245 PF04346 Ethanolamine utilisation protein, EutH JJQ57_RS21250 PF08220 DeoR-like helix-turn-helix domain JJQ57_RS21250 PF00455 DeoR C terminal sensor domain JJQ57_RS21255 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS21255 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS21260 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS21260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS21265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JJQ57_RS21265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JJQ57_RS21270 PF03576 Peptidase family S58 JJQ57_RS21280 PF00072 Response regulator receiver domain JJQ57_RS21280 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS21295 PF03918 Cytochrome C biogenesis protein JJQ57_RS21300 PF08534 Redoxin JJQ57_RS21305 PF01578 Cytochrome C assembly protein JJQ57_RS21305 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JJQ57_RS21310 PF03100 CcmE JJQ57_RS21315 PF04995 Heme exporter protein D (CcmD) JJQ57_RS21320 PF01578 Cytochrome C assembly protein JJQ57_RS21325 PF03379 CcmB protein JJQ57_RS21330 PF00005 ABC transporter JJQ57_RS21340 PF01312 FlhB HrpN YscU SpaS Family JJQ57_RS21355 PF02578 Multi-copper polyphenol oxidoreductase laccase JJQ57_RS21365 PF13280 WYL domain JJQ57_RS21380 PF01584 CheW-like domain JJQ57_RS21390 PF13614 AAA domain JJQ57_RS21395 PF13677 Membrane MotB of proton-channel complex MotA/MotB JJQ57_RS21395 PF00691 OmpA family JJQ57_RS21400 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS21405 PF00072 Response regulator receiver domain JJQ57_RS21405 PF01339 CheB methylesterase JJQ57_RS21410 PF00072 Response regulator receiver domain JJQ57_RS21410 PF01627 Hpt domain JJQ57_RS21410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS21410 PF01584 CheW-like domain JJQ57_RS21410 PF02895 Signal transducing histidine kinase, homodimeric domain JJQ57_RS21415 PF04344 Chemotaxis phosphatase, CheZ JJQ57_RS21420 PF00072 Response regulator receiver domain JJQ57_RS21425 PF04539 Sigma-70 region 3 JJQ57_RS21425 PF04545 Sigma-70, region 4 JJQ57_RS21425 PF04542 Sigma-70 region 2 JJQ57_RS21430 PF10609 NUBPL iron-transfer P-loop NTPase JJQ57_RS21435 PF00448 SRP54-type protein, GTPase domain JJQ57_RS21440 PF00771 FHIPEP family JJQ57_RS21445 PF04536 TPM domain JJQ57_RS21455 PF01312 FlhB HrpN YscU SpaS Family JJQ57_RS21460 PF01311 Bacterial export proteins, family 1 JJQ57_RS21465 PF01313 Bacterial export proteins, family 3 JJQ57_RS21470 PF00813 FliP family JJQ57_RS21475 PF04347 Flagellar biosynthesis protein, FliO JJQ57_RS21480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ57_RS21485 PF02154 Flagellar motor switch protein FliM JJQ57_RS21485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JJQ57_RS21505 PF04304 Protein of unknown function (DUF454) JJQ57_RS21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS21510 PF00672 HAMP domain JJQ57_RS21510 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS21515 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS21515 PF00072 Response regulator receiver domain JJQ57_RS21520 PF00873 AcrB/AcrD/AcrF family JJQ57_RS21525 PF13533 Biotin-lipoyl like JJQ57_RS21535 PF00563 EAL domain JJQ57_RS21535 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS21535 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS21535 PF13188 PAS domain JJQ57_RS21540 PF00765 Autoinducer synthase JJQ57_RS21545 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS21545 PF03472 Autoinducer binding domain JJQ57_RS21580 PF01738 Dienelactone hydrolase family JJQ57_RS21590 PF00899 ThiF family JJQ57_RS21600 PF07687 Peptidase dimerisation domain JJQ57_RS21600 PF01546 Peptidase family M20/M25/M40 JJQ57_RS21605 PF13847 Methyltransferase domain JJQ57_RS21615 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS21620 PF00672 HAMP domain JJQ57_RS21620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS21620 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS21625 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS21625 PF00072 Response regulator receiver domain JJQ57_RS21630 PF00317 Ribonucleotide reductase, all-alpha domain JJQ57_RS21630 PF03477 ATP cone domain JJQ57_RS21630 PF02867 Ribonucleotide reductase, barrel domain JJQ57_RS21635 PF00268 Ribonucleotide reductase, small chain JJQ57_RS21660 PF06958 S-type Pyocin JJQ57_RS21660 PF06958 S-type Pyocin JJQ57_RS21670 PF09102 Exotoxin A, targeting JJQ57_RS21670 PF09009 Exotoxin A catalytic JJQ57_RS21670 PF09101 Exotoxin A binding JJQ57_RS21675 PF13520 Amino acid permease JJQ57_RS21680 PF00465 Iron-containing alcohol dehydrogenase JJQ57_RS21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS21685 PF03466 LysR substrate binding domain JJQ57_RS21700 PF07702 UTRA domain JJQ57_RS21700 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS21705 PF03466 LysR substrate binding domain JJQ57_RS21710 PF07883 Cupin domain JJQ57_RS21710 PF05899 Protein of unknown function (DUF861) JJQ57_RS21725 PF08659 KR domain JJQ57_RS21725 PF00550 Phosphopantetheine attachment site JJQ57_RS21725 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS21725 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS21725 PF14765 Polyketide synthase dehydratase JJQ57_RS21725 PF16197 Ketoacyl-synthetase C-terminal extension JJQ57_RS21725 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS21725 PF00698 Acyl transferase domain JJQ57_RS21730 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS21730 PF03472 Autoinducer binding domain JJQ57_RS21735 PF01965 DJ-1/PfpI family JJQ57_RS21755 PF07690 Major Facilitator Superfamily JJQ57_RS21765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JJQ57_RS21770 PF03466 LysR substrate binding domain JJQ57_RS21770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS21775 PF00248 Aldo/keto reductase family JJQ57_RS21785 PF02146 Sir2 family JJQ57_RS21790 PF01966 HD domain JJQ57_RS21790 PF13286 Phosphohydrolase-associated domain JJQ57_RS21800 PF01327 Polypeptide deformylase JJQ57_RS21805 PF13689 YfiR/HmsC-like JJQ57_RS21810 PF17152 Periplasmic sensor domain JJQ57_RS21810 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS21815 PF00691 OmpA family JJQ57_RS21830 PF13509 S1 domain JJQ57_RS21830 PF17783 CvfB-like winged helix domain JJQ57_RS21845 PF00005 ABC transporter JJQ57_RS21845 PF00664 ABC transporter transmembrane region JJQ57_RS21855 PF09905 DNA-binding protein VF530 JJQ57_RS21860 PF07995 Glucose / Sorbosone dehydrogenase JJQ57_RS21875 PF02311 AraC-like ligand binding domain JJQ57_RS21875 PF12833 Helix-turn-helix domain JJQ57_RS21880 PF07690 Major Facilitator Superfamily JJQ57_RS21885 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS21885 PF17151 Periplasmic sensor domain JJQ57_RS21895 PF02050 Flagellar FliJ protein JJQ57_RS21900 PF18269 T3SS EscN ATPase C-terminal domain JJQ57_RS21900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ57_RS21910 PF14841 FliG middle domain JJQ57_RS21910 PF01706 FliG C-terminal domain JJQ57_RS21910 PF14842 FliG N-terminal domain JJQ57_RS21915 PF01514 Secretory protein of YscJ/FliF family JJQ57_RS21915 PF08345 Flagellar M-ring protein C-terminal JJQ57_RS21920 PF02049 Flagellar hook-basal body complex protein FliE JJQ57_RS21925 PF00158 Sigma-54 interaction domain JJQ57_RS21925 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS21925 PF00072 Response regulator receiver domain JJQ57_RS21930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS21930 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS21930 PF13188 PAS domain JJQ57_RS21935 PF00158 Sigma-54 interaction domain JJQ57_RS21935 PF06490 Flagellar regulatory protein FleQ JJQ57_RS21935 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS21945 PF02561 Flagellar protein FliS JJQ57_RS21950 PF02561 Flagellar protein FliS JJQ57_RS21955 PF02465 Flagellar hook-associated protein 2 N-terminus JJQ57_RS21955 PF07196 Flagellin hook IN motif JJQ57_RS21955 PF07195 Flagellar hook-associated protein 2 C-terminus JJQ57_RS21965 PF00700 Bacterial flagellin C-terminal helical region JJQ57_RS21965 PF00669 Bacterial flagellin N-terminal helical region JJQ57_RS21970 PF00535 Glycosyl transferase family 2 JJQ57_RS22000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ57_RS22000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ57_RS22010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JJQ57_RS22015 PF00669 Bacterial flagellin N-terminal helical region JJQ57_RS22020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ57_RS22020 PF00460 Flagella basal body rod protein JJQ57_RS22025 PF10135 Rod binding protein JJQ57_RS22025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JJQ57_RS22030 PF02119 Flagellar P-ring protein JJQ57_RS22035 PF02107 Flagellar L-ring protein JJQ57_RS22040 PF00460 Flagella basal body rod protein JJQ57_RS22040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ57_RS22045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ57_RS22045 PF00460 Flagella basal body rod protein JJQ57_RS22050 PF07559 Flagellar basal body protein FlaE JJQ57_RS22050 PF00460 Flagella basal body rod protein JJQ57_RS22050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ57_RS22055 PF03963 Flagellar hook capping protein - N-terminal region JJQ57_RS22055 PF13861 FlgD Tudor-like domain JJQ57_RS22055 PF13860 FlgD Ig-like domain JJQ57_RS22060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JJQ57_RS22060 PF00460 Flagella basal body rod protein JJQ57_RS22065 PF00460 Flagella basal body rod protein JJQ57_RS22080 PF13458 Periplasmic binding protein JJQ57_RS22085 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS22090 PF11862 Domain of unknown function (DUF3382) JJQ57_RS22090 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS22095 PF12399 Branched-chain amino acid ATP-binding cassette transporter JJQ57_RS22095 PF00005 ABC transporter JJQ57_RS22100 PF00005 ABC transporter JJQ57_RS22110 PF00183 Hsp90 protein JJQ57_RS22110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS22115 PF03466 LysR substrate binding domain JJQ57_RS22125 PF04343 Protein of unknown function, DUF488 JJQ57_RS22145 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS22160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JJQ57_RS22165 PF01899 Na+/H+ ion antiporter subunit JJQ57_RS22170 PF00361 Proton-conducting membrane transporter JJQ57_RS22175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JJQ57_RS22180 PF00361 Proton-conducting membrane transporter JJQ57_RS22180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JJQ57_RS22180 PF13244 Domain of unknown function (DUF4040) JJQ57_RS22180 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JJQ57_RS22185 PF05433 Glycine zipper 2TM domain JJQ57_RS22195 PF02595 Glycerate kinase family JJQ57_RS22200 PF02447 GntP family permease JJQ57_RS22205 PF05651 Putative sugar diacid recognition JJQ57_RS22205 PF17853 GGDEF-like domain JJQ57_RS22205 PF13556 PucR C-terminal helix-turn-helix domain JJQ57_RS22210 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JJQ57_RS22210 PF01243 Pyridoxamine 5'-phosphate oxidase JJQ57_RS22215 PF00691 OmpA family JJQ57_RS22215 PF00223 Photosystem I psaA/psaB protein JJQ57_RS22220 PF00144 Beta-lactamase JJQ57_RS22225 PF02449 Beta-galactosidase JJQ57_RS22225 PF17992 Agarase CBM like domain JJQ57_RS22230 PF13307 Helicase C-terminal domain JJQ57_RS22230 PF06733 DEAD_2 JJQ57_RS22250 PF00691 OmpA family JJQ57_RS22250 PF05736 OprF membrane domain JJQ57_RS22260 PF02810 SEC-C motif JJQ57_RS22270 PF03458 UPF0126 domain JJQ57_RS22285 PF07516 SecA Wing and Scaffold domain JJQ57_RS22285 PF07517 SecA DEAD-like domain JJQ57_RS22285 PF01043 SecA preprotein cross-linking domain JJQ57_RS22285 PF02810 SEC-C motif JJQ57_RS22290 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS22290 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS22295 PF01804 Penicillin amidase JJQ57_RS22300 PF02646 RmuC family JJQ57_RS22315 PF01266 FAD dependent oxidoreductase JJQ57_RS22320 PF00171 Aldehyde dehydrogenase family JJQ57_RS22340 PF03060 Nitronate monooxygenase JJQ57_RS22345 PF00106 short chain dehydrogenase JJQ57_RS22350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS22350 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS22350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS22355 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS22360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS22360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS22360 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS22370 PF07690 Major Facilitator Superfamily JJQ57_RS22375 PF01575 MaoC like domain JJQ57_RS22380 PF13607 Succinyl-CoA ligase like flavodoxin domain JJQ57_RS22380 PF13380 CoA binding domain JJQ57_RS22385 PF02803 Thiolase, C-terminal domain JJQ57_RS22385 PF00108 Thiolase, N-terminal domain JJQ57_RS22400 PF00535 Glycosyl transferase family 2 JJQ57_RS22420 PF00182 Chitinase class I JJQ57_RS22520 PF00574 Clp protease JJQ57_RS22525 PF04860 Phage portal protein JJQ57_RS22535 PF03354 Phage Terminase JJQ57_RS22575 PF12323 Helix-turn-helix domain JJQ57_RS22575 PF01385 Probable transposase JJQ57_RS22575 PF07282 Putative transposase DNA-binding domain JJQ57_RS22615 PF03796 DnaB-like helicase C terminal domain JJQ57_RS22615 PF00772 DnaB-like helicase N terminal domain JJQ57_RS22635 PF01381 Helix-turn-helix JJQ57_RS22635 PF00717 Peptidase S24-like JJQ57_RS22690 PF07282 Putative transposase DNA-binding domain JJQ57_RS22690 PF01385 Probable transposase JJQ57_RS22690 PF12323 Helix-turn-helix domain JJQ57_RS22715 PF06630 Enterobacterial exodeoxyribonuclease VIII JJQ57_RS22715 PF12684 PDDEXK-like domain of unknown function (DUF3799) JJQ57_RS22725 PF00436 Single-strand binding protein family JJQ57_RS22785 PF00589 Phage integrase family JJQ57_RS22795 PF01259 SAICAR synthetase JJQ57_RS22800 PF10996 Beta-Casp domain JJQ57_RS22800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JJQ57_RS22800 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS22805 PF06804 NlpB/DapX lipoprotein JJQ57_RS22810 PF00701 Dihydrodipicolinate synthetase family JJQ57_RS22820 PF00578 AhpC/TSA family JJQ57_RS22825 PF01594 AI-2E family transporter JJQ57_RS22830 PF01206 Sulfurtransferase TusA JJQ57_RS22835 PF01435 Peptidase family M48 JJQ57_RS22840 PF02445 Quinolinate synthetase A protein JJQ57_RS22845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS22845 PF03466 LysR substrate binding domain JJQ57_RS22850 PF00117 Glutamine amidotransferase class-I JJQ57_RS22855 PF04715 Anthranilate synthase component I, N terminal region JJQ57_RS22855 PF00425 chorismate binding enzyme JJQ57_RS22860 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS22865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ57_RS22865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ57_RS22870 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ57_RS22870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ57_RS22880 PF00501 AMP-binding enzyme JJQ57_RS22880 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS22885 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JJQ57_RS22885 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JJQ57_RS22890 PF13953 PapC C-terminal domain JJQ57_RS22890 PF00577 Outer membrane usher protein JJQ57_RS22890 PF13954 PapC N-terminal domain JJQ57_RS22895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ57_RS22895 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ57_RS22900 PF00419 Fimbrial protein JJQ57_RS22910 PF00293 NUDIX domain JJQ57_RS22960 PF07905 Purine catabolism regulatory protein-like family JJQ57_RS22960 PF13556 PucR C-terminal helix-turn-helix domain JJQ57_RS22970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS22970 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS22975 PF04632 Fusaric acid resistance protein family JJQ57_RS22990 PF03466 LysR substrate binding domain JJQ57_RS22990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS22995 PF07690 Major Facilitator Superfamily JJQ57_RS23000 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS23000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS23005 PF02321 Outer membrane efflux protein JJQ57_RS23010 PF00857 Isochorismatase family JJQ57_RS23025 PF00561 alpha/beta hydrolase fold JJQ57_RS23030 PF06628 Catalase-related immune-responsive JJQ57_RS23030 PF00199 Catalase JJQ57_RS23080 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS23080 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS23080 PF12705 PD-(D/E)XK nuclease superfamily JJQ57_RS23140 PF01548 Transposase JJQ57_RS23140 PF02371 Transposase IS116/IS110/IS902 family JJQ57_RS23185 PF01526 Tn3 transposase DDE domain JJQ57_RS23185 PF13700 Domain of unknown function (DUF4158) JJQ57_RS23215 PF00216 Bacterial DNA-binding protein JJQ57_RS23220 PF00575 S1 RNA binding domain JJQ57_RS23225 PF02224 Cytidylate kinase JJQ57_RS23230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JJQ57_RS23235 PF00155 Aminotransferase class I and II JJQ57_RS23240 PF01817 Chorismate mutase type II JJQ57_RS23240 PF00800 Prephenate dehydratase JJQ57_RS23240 PF01842 ACT domain JJQ57_RS23245 PF00266 Aminotransferase class-V JJQ57_RS23250 PF00521 DNA gyrase/topoisomerase IV, subunit A JJQ57_RS23250 PF03989 DNA gyrase C-terminal domain, beta-propeller JJQ57_RS23255 PF01008 Initiation factor 2 subunit family JJQ57_RS23260 PF01979 Amidohydrolase family JJQ57_RS23270 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS23275 PF00106 short chain dehydrogenase JJQ57_RS23285 PF00491 Arginase family JJQ57_RS23290 PF03616 Sodium/glutamate symporter JJQ57_RS23295 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS23305 PF01479 S4 domain JJQ57_RS23305 PF00849 RNA pseudouridylate synthase JJQ57_RS23315 PF01081 KDPG and KHG aldolase JJQ57_RS23320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JJQ57_RS23325 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JJQ57_RS23325 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JJQ57_RS23330 PF01418 Helix-turn-helix domain, rpiR family JJQ57_RS23330 PF01380 SIS domain JJQ57_RS23335 PF01263 Aldose 1-epimerase JJQ57_RS23340 PF04966 Carbohydrate-selective porin, OprB family JJQ57_RS23345 PF00005 ABC transporter JJQ57_RS23345 PF17912 MalK OB fold domain JJQ57_RS23350 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS23355 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS23360 PF01547 Bacterial extracellular solute-binding protein JJQ57_RS23370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS23370 PF00672 HAMP domain JJQ57_RS23370 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS23375 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS23375 PF00072 Response regulator receiver domain JJQ57_RS23380 PF02685 Glucokinase JJQ57_RS23385 PF00920 Dehydratase family JJQ57_RS23390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ57_RS23390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ57_RS23405 PF04079 Segregation and condensation complex subunit ScpB JJQ57_RS23410 PF02616 Segregation and condensation protein ScpA JJQ57_RS23415 PF01300 Telomere recombination JJQ57_RS23420 PF02811 PHP domain JJQ57_RS23425 PF04279 Intracellular septation protein A JJQ57_RS23430 PF03795 YCII-related domain JJQ57_RS23440 PF00072 Response regulator receiver domain JJQ57_RS23440 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS23450 PF00672 HAMP domain JJQ57_RS23450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS23450 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS23450 PF16750 Sensor domain of 2-component histidine kinase JJQ57_RS23460 PF00881 Nitroreductase family JJQ57_RS23465 PF03692 Putative zinc- or iron-chelating domain JJQ57_RS23470 PF02386 Cation transport protein JJQ57_RS23475 PF02405 Permease MlaE JJQ57_RS23480 PF00005 ABC transporter JJQ57_RS23495 PF12833 Helix-turn-helix domain JJQ57_RS23495 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS23505 PF00211 Adenylate and Guanylate cyclase catalytic domain JJQ57_RS23510 PF13439 Glycosyltransferase Family 4 JJQ57_RS23510 PF00534 Glycosyl transferases group 1 JJQ57_RS23520 PF12833 Helix-turn-helix domain JJQ57_RS23525 PF01588 Putative tRNA binding domain JJQ57_RS23535 PF03466 LysR substrate binding domain JJQ57_RS23535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS23540 PF03358 NADPH-dependent FMN reductase JJQ57_RS23545 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS23545 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS23555 PF01597 Glycine cleavage H-protein JJQ57_RS23565 PF02525 Flavodoxin-like fold JJQ57_RS23580 PF00561 alpha/beta hydrolase fold JJQ57_RS23585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JJQ57_RS23590 PF00005 ABC transporter JJQ57_RS23590 PF00664 ABC transporter transmembrane region JJQ57_RS23620 PF00474 Sodium:solute symporter family JJQ57_RS23625 PF04341 Protein of unknown function, DUF485 JJQ57_RS23630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS23645 PF04333 MlaA lipoprotein JJQ57_RS23735 PF02796 Helix-turn-helix domain of resolvase JJQ57_RS23735 PF00239 Resolvase, N terminal domain JJQ57_RS23750 PF03279 Bacterial lipid A biosynthesis acyltransferase JJQ57_RS23755 PF03775 Septum formation inhibitor MinC, C-terminal domain JJQ57_RS23755 PF05209 Septum formation inhibitor MinC, N-terminal domain JJQ57_RS23760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ57_RS23765 PF03776 Septum formation topological specificity factor MinE JJQ57_RS23770 PF00849 RNA pseudouridylate synthase JJQ57_RS23775 PF02127 Aminopeptidase I zinc metalloprotease (M18) JJQ57_RS23780 PF13302 Acetyltransferase (GNAT) domain JJQ57_RS23785 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS23785 PF07702 UTRA domain JJQ57_RS23800 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS23810 PF08402 TOBE domain JJQ57_RS23810 PF00005 ABC transporter JJQ57_RS23815 PF18429 Domain of unknown function (DUF5609) JJQ57_RS23820 PF14765 Polyketide synthase dehydratase JJQ57_RS23820 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS23820 PF16197 Ketoacyl-synthetase C-terminal extension JJQ57_RS23820 PF00550 Phosphopantetheine attachment site JJQ57_RS23820 PF00698 Acyl transferase domain JJQ57_RS23820 PF08659 KR domain JJQ57_RS23820 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS23820 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS23825 PF03572 Peptidase family S41 JJQ57_RS23825 PF17804 Tail specific protease N-terminal domain JJQ57_RS23825 PF11818 C-terminal domain of tail specific protease (DUF3340) JJQ57_RS23825 PF00595 PDZ domain JJQ57_RS23830 PF00563 EAL domain JJQ57_RS23830 PF17153 Periplasmic sensor domain, extracellular JJQ57_RS23860 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JJQ57_RS23860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS23875 PF04381 Putative exonuclease, RdgC JJQ57_RS23880 PF01758 Sodium Bile acid symporter family JJQ57_RS23885 PF00893 Small Multidrug Resistance protein JJQ57_RS23890 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS23895 PF07690 Major Facilitator Superfamily JJQ57_RS23900 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS23900 PF00593 TonB dependent receptor JJQ57_RS23900 PF07660 Secretin and TonB N terminus short domain JJQ57_RS23905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS23905 PF12833 Helix-turn-helix domain JJQ57_RS23915 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS23915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS23920 PF00271 Helicase conserved C-terminal domain JJQ57_RS23920 PF08494 DEAD/H associated JJQ57_RS23920 PF00270 DEAD/DEAH box helicase JJQ57_RS23935 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JJQ57_RS23945 PF00561 alpha/beta hydrolase fold JJQ57_RS23945 PF00106 short chain dehydrogenase JJQ57_RS23955 PF07396 Phosphate-selective porin O and P JJQ57_RS23960 PF07396 Phosphate-selective porin O and P JJQ57_RS23975 PF05114 Protein of unknown function (DUF692) JJQ57_RS23990 PF08281 Sigma-70, region 4 JJQ57_RS23990 PF04542 Sigma-70 region 2 JJQ57_RS23995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ57_RS23995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ57_RS24000 PF00023 Ankyrin repeat JJQ57_RS24000 PF12796 Ankyrin repeats (3 copies) JJQ57_RS24040 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS24045 PF01230 HIT domain JJQ57_RS24050 PF00245 Alkaline phosphatase JJQ57_RS24055 PF00270 DEAD/DEAH box helicase JJQ57_RS24055 PF11898 Domain of unknown function (DUF3418) JJQ57_RS24055 PF00271 Helicase conserved C-terminal domain JJQ57_RS24055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JJQ57_RS24055 PF04408 Helicase associated domain (HA2) JJQ57_RS24065 PF00501 AMP-binding enzyme JJQ57_RS24065 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS24070 PF00501 AMP-binding enzyme JJQ57_RS24070 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS24075 PF12146 Serine aminopeptidase, S33 JJQ57_RS24080 PF01575 MaoC like domain JJQ57_RS24085 PF07690 Major Facilitator Superfamily JJQ57_RS24090 PF13533 Biotin-lipoyl like JJQ57_RS24120 PF18339 RapA N-terminal Tudor like domain 1 JJQ57_RS24120 PF12137 RNA polymerase recycling family C-terminal JJQ57_RS24120 PF18337 RapA N-terminal Tudor like domain JJQ57_RS24120 PF00271 Helicase conserved C-terminal domain JJQ57_RS24120 PF00176 SNF2 family N-terminal domain JJQ57_RS24125 PF00582 Universal stress protein family JJQ57_RS24130 PF00884 Sulfatase JJQ57_RS24130 PF08019 Phosphoethanolamine transferase EptA/EptB JJQ57_RS24135 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS24135 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS24135 PF00563 EAL domain JJQ57_RS24140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JJQ57_RS24140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JJQ57_RS24150 PF00005 ABC transporter JJQ57_RS24155 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS24160 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS24175 PF04185 Phosphoesterase family JJQ57_RS24175 PF05506 Domain of unknown function (DUF756) JJQ57_RS24185 PF03466 LysR substrate binding domain JJQ57_RS24185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS24200 PF00561 alpha/beta hydrolase fold JJQ57_RS24200 PF00106 short chain dehydrogenase JJQ57_RS24210 PF00574 Clp protease JJQ57_RS24215 PF00975 Thioesterase domain JJQ57_RS24215 PF00501 AMP-binding enzyme JJQ57_RS24215 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS24215 PF00668 Condensation domain JJQ57_RS24215 PF00550 Phosphopantetheine attachment site JJQ57_RS24220 PF01494 FAD binding domain JJQ57_RS24235 PF00171 Aldehyde dehydrogenase family JJQ57_RS24240 PF05544 Proline racemase JJQ57_RS24245 PF07729 FCD domain JJQ57_RS24245 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS24255 PF05593 RHS Repeat JJQ57_RS24255 PF03527 RHS protein JJQ57_RS24260 PF06715 Gp5 C-terminal repeat (3 copies) JJQ57_RS24260 PF04717 Type VI secretion system, phage-baseplate injector JJQ57_RS24265 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS24265 PF00072 Response regulator receiver domain JJQ57_RS24270 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS24270 PF00672 HAMP domain JJQ57_RS24270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS24270 PF16750 Sensor domain of 2-component histidine kinase JJQ57_RS24275 PF00593 TonB dependent receptor JJQ57_RS24275 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS24280 PF00756 Putative esterase JJQ57_RS24290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS24295 PF02082 Transcriptional regulator JJQ57_RS24300 PF03061 Thioesterase superfamily JJQ57_RS24310 PF07759 Protein of unknown function (DUF1615) JJQ57_RS24315 PF12833 Helix-turn-helix domain JJQ57_RS24330 PF07969 Amidohydrolase family JJQ57_RS24335 PF03573 outer membrane porin, OprD family JJQ57_RS24345 PF18648 Tse2 ADP-ribosyltransferase toxins JJQ57_RS24355 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS24355 PF12833 Helix-turn-helix domain JJQ57_RS24370 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS24370 PF02861 Clp amino terminal domain, pathogenicity island component JJQ57_RS24370 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS24370 PF17871 AAA lid domain JJQ57_RS24370 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS24380 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS24385 PF01810 LysE type translocator JJQ57_RS24390 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS24400 PF01638 HxlR-like helix-turn-helix JJQ57_RS24405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ57_RS24405 PF00384 Molybdopterin oxidoreductase JJQ57_RS24405 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS24410 PF11953 Domain of unknown function (DUF3470) JJQ57_RS24410 PF00037 4Fe-4S binding domain JJQ57_RS24415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS24415 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS24420 PF00561 alpha/beta hydrolase fold JJQ57_RS24425 PF13411 MerR HTH family regulatory protein JJQ57_RS24470 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS24470 PF17871 AAA lid domain JJQ57_RS24470 PF02861 Clp amino terminal domain, pathogenicity island component JJQ57_RS24470 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS24470 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS24480 PF13195 Protein of unknown function (DUF4011) JJQ57_RS24480 PF13086 AAA domain JJQ57_RS24480 PF13086 AAA domain JJQ57_RS24480 PF13087 AAA domain JJQ57_RS24480 PF13087 AAA domain JJQ57_RS24480 PF13195 Protein of unknown function (DUF4011) JJQ57_RS24535 PF11867 Domain of unknown function (DUF3387) JJQ57_RS24535 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JJQ57_RS24535 PF18766 SWI2/SNF2 ATPase JJQ57_RS24545 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS24545 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS24555 PF02384 N-6 DNA Methylase JJQ57_RS24555 PF12161 HsdM N-terminal domain JJQ57_RS24560 PF02384 N-6 DNA Methylase JJQ57_RS24570 PF00270 DEAD/DEAH box helicase JJQ57_RS24570 PF00271 Helicase conserved C-terminal domain JJQ57_RS24585 PF00216 Bacterial DNA-binding protein JJQ57_RS24590 PF03147 Ferredoxin-fold anticodon binding domain JJQ57_RS24590 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JJQ57_RS24590 PF03483 B3/4 domain JJQ57_RS24590 PF01588 Putative tRNA binding domain JJQ57_RS24590 PF03484 tRNA synthetase B5 domain JJQ57_RS24595 PF01409 tRNA synthetases class II core domain (F) JJQ57_RS24595 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JJQ57_RS24600 PF00453 Ribosomal protein L20 JJQ57_RS24605 PF01632 Ribosomal protein L35 JJQ57_RS24610 PF05198 Translation initiation factor IF-3, N-terminal domain JJQ57_RS24610 PF00707 Translation initiation factor IF-3, C-terminal domain JJQ57_RS24615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JJQ57_RS24615 PF03129 Anticodon binding domain JJQ57_RS24615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JJQ57_RS24615 PF02824 TGS domain JJQ57_RS24620 PF00561 alpha/beta hydrolase fold JJQ57_RS24645 PF00557 Metallopeptidase family M24 JJQ57_RS24675 PF04851 Type III restriction enzyme, res subunit JJQ57_RS24710 PF00106 short chain dehydrogenase JJQ57_RS24715 PF00067 Cytochrome P450 JJQ57_RS24720 PF12680 SnoaL-like domain JJQ57_RS24725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JJQ57_RS24725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JJQ57_RS24740 PF07690 Major Facilitator Superfamily JJQ57_RS24745 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS24755 PF01734 Patatin-like phospholipase JJQ57_RS24775 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS24775 PF00360 Phytochrome region JJQ57_RS24775 PF00563 EAL domain JJQ57_RS24775 PF01590 GAF domain JJQ57_RS24780 PF00570 HRDC domain JJQ57_RS24780 PF00271 Helicase conserved C-terminal domain JJQ57_RS24780 PF09382 RQC domain JJQ57_RS24780 PF16124 RecQ zinc-binding JJQ57_RS24780 PF00270 DEAD/DEAH box helicase JJQ57_RS24790 PF00072 Response regulator receiver domain JJQ57_RS24790 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS24795 PF13466 STAS domain JJQ57_RS24800 PF03705 CheR methyltransferase, all-alpha domain JJQ57_RS24800 PF01739 CheR methyltransferase, SAM binding domain JJQ57_RS24805 PF01584 CheW-like domain JJQ57_RS24805 PF00072 Response regulator receiver domain JJQ57_RS24825 PF07317 Flagellar regulator YcgR JJQ57_RS24825 PF07238 PilZ domain JJQ57_RS24835 PF07690 Major Facilitator Superfamily JJQ57_RS24840 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS24845 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS24850 PF00892 EamA-like transporter family JJQ57_RS24860 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS24860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS24875 PF03861 ANTAR domain JJQ57_RS24885 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS24885 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS24890 PF00795 Carbon-nitrogen hydrolase JJQ57_RS24935 PF12706 Beta-lactamase superfamily domain JJQ57_RS24945 PF07969 Amidohydrolase family JJQ57_RS24950 PF00005 ABC transporter JJQ57_RS24955 PF00005 ABC transporter JJQ57_RS24960 PF06007 Phosphonate metabolism protein PhnJ JJQ57_RS24965 PF05861 Bacterial phosphonate metabolism protein (PhnI) JJQ57_RS24975 PF06754 Phosphonate metabolism protein PhnG JJQ57_RS24980 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS24980 PF07702 UTRA domain JJQ57_RS24985 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS24995 PF00005 ABC transporter JJQ57_RS25000 PF03869 Arc-like DNA binding domain JJQ57_RS25015 PF01980 tRNA-methyltransferase O JJQ57_RS25015 PF18389 TrmO C-terminal domain JJQ57_RS25030 PF04205 FMN-binding domain JJQ57_RS25030 PF12801 4Fe-4S binding domain JJQ57_RS25035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JJQ57_RS25035 PF18764 Nitrous oxide reductase propeller repeat JJQ57_RS25035 PF18793 Nitrous oxide reductase propeller repeat 2 JJQ57_RS25040 PF05048 Periplasmic copper-binding protein (NosD) JJQ57_RS25045 PF00005 ABC transporter JJQ57_RS25050 PF12679 ABC-2 family transporter protein JJQ57_RS25055 PF05573 NosL JJQ57_RS25060 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS25060 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS25065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25065 PF03466 LysR substrate binding domain JJQ57_RS25090 PF06146 Phosphate-starvation-inducible E JJQ57_RS25100 PF02321 Outer membrane efflux protein JJQ57_RS25105 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS25110 PF00664 ABC transporter transmembrane region JJQ57_RS25110 PF00005 ABC transporter JJQ57_RS25115 PF06438 Heme-binding protein A (HasA) JJQ57_RS25120 PF00593 TonB dependent receptor JJQ57_RS25120 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS25160 PF00364 Biotin-requiring enzyme JJQ57_RS25160 PF02817 e3 binding domain JJQ57_RS25160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JJQ57_RS25165 PF02780 Transketolase, C-terminal domain JJQ57_RS25165 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS25170 PF00676 Dehydrogenase E1 component JJQ57_RS25175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JJQ57_RS25175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JJQ57_RS25180 PF13369 Transglutaminase-like superfamily JJQ57_RS25185 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS25190 PF07044 Protein of unknown function (DUF1329) JJQ57_RS25205 PF01593 Flavin containing amine oxidoreductase JJQ57_RS25215 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS25220 PF00106 short chain dehydrogenase JJQ57_RS25230 PF00561 alpha/beta hydrolase fold JJQ57_RS25235 PF00596 Class II Aldolase and Adducin N-terminal domain JJQ57_RS25240 PF04172 LrgB-like family JJQ57_RS25245 PF03788 LrgA family JJQ57_RS25250 PF03466 LysR substrate binding domain JJQ57_RS25250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25255 PF00258 Flavodoxin JJQ57_RS25270 PF01227 GTP cyclohydrolase I JJQ57_RS25275 PF02152 Dihydroneopterin aldolase JJQ57_RS25290 PF03459 TOBE domain JJQ57_RS25290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25295 PF00005 ABC transporter JJQ57_RS25300 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS25305 PF00296 Luciferase-like monooxygenase JJQ57_RS25310 PF09084 NMT1/THI5 like JJQ57_RS25315 PF03358 NADPH-dependent FMN reductase JJQ57_RS25320 PF00005 ABC transporter JJQ57_RS25325 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS25330 PF09084 NMT1/THI5 like JJQ57_RS25335 PF10417 C-terminal domain of 1-Cys peroxiredoxin JJQ57_RS25335 PF00578 AhpC/TSA family JJQ57_RS25345 PF06039 Malate:quinone oxidoreductase (Mqo) JJQ57_RS25380 PF04337 Protein of unknown function, DUF480 JJQ57_RS25385 PF00108 Thiolase, N-terminal domain JJQ57_RS25385 PF02803 Thiolase, C-terminal domain JJQ57_RS25390 PF03976 Polyphosphate kinase 2 (PPK2) JJQ57_RS25400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JJQ57_RS25400 PF01266 FAD dependent oxidoreductase JJQ57_RS25405 PF01925 Sulfite exporter TauE/SafE JJQ57_RS25415 PF13537 Glutamine amidotransferase domain JJQ57_RS25415 PF00733 Asparagine synthase JJQ57_RS25420 PF08443 RimK-like ATP-grasp domain JJQ57_RS25420 PF08245 Mur ligase middle domain JJQ57_RS25420 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS25425 PF05343 M42 glutamyl aminopeptidase JJQ57_RS25430 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS25430 PF01627 Hpt domain JJQ57_RS25430 PF00672 HAMP domain JJQ57_RS25430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS25430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS25430 PF00072 Response regulator receiver domain JJQ57_RS25435 PF06794 Uncharacterised protein family (UPF0270) JJQ57_RS25450 PF00270 DEAD/DEAH box helicase JJQ57_RS25450 PF00271 Helicase conserved C-terminal domain JJQ57_RS25455 PF07690 Major Facilitator Superfamily JJQ57_RS25460 PF00924 Mechanosensitive ion channel JJQ57_RS25465 PF01872 RibD C-terminal domain JJQ57_RS25475 PF00390 Malic enzyme, N-terminal domain JJQ57_RS25475 PF03949 Malic enzyme, NAD binding domain JJQ57_RS25480 PF00877 NlpC/P60 family JJQ57_RS25490 PF00892 EamA-like transporter family JJQ57_RS25495 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS25500 PF00765 Autoinducer synthase JJQ57_RS25505 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS25505 PF03472 Autoinducer binding domain JJQ57_RS25540 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS25540 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS25565 PF00589 Phage integrase family JJQ57_RS25575 PF06508 Queuosine biosynthesis protein QueC JJQ57_RS25580 PF04055 Radical SAM superfamily JJQ57_RS25585 PF16331 TolA binding protein trimerisation JJQ57_RS25585 PF13525 Outer membrane lipoprotein JJQ57_RS25590 PF00691 OmpA family JJQ57_RS25595 PF04052 TolB amino-terminal domain JJQ57_RS25595 PF07676 WD40-like Beta Propeller Repeat JJQ57_RS25605 PF02472 Biopolymer transport protein ExbD/TolR JJQ57_RS25610 PF01618 MotA/TolQ/ExbB proton channel family JJQ57_RS25615 PF03061 Thioesterase superfamily JJQ57_RS25620 PF05491 RuvB C-terminal winged helix domain JJQ57_RS25620 PF05496 Holliday junction DNA helicase RuvB P-loop domain JJQ57_RS25620 PF17864 RuvB AAA lid domain JJQ57_RS25625 PF07499 RuvA, C-terminal domain JJQ57_RS25625 PF01330 RuvA N terminal domain JJQ57_RS25630 PF02075 Crossover junction endodeoxyribonuclease RuvC JJQ57_RS25635 PF01709 Transcriptional regulator JJQ57_RS25640 PF01336 OB-fold nucleic acid binding domain JJQ57_RS25640 PF02938 GAD domain JJQ57_RS25640 PF00152 tRNA synthetases class II (D, K and N) JJQ57_RS25645 PF00210 Ferritin-like domain JJQ57_RS25670 PF04102 SlyX JJQ57_RS25675 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS25690 PF00689 Cation transporting ATPase, C-terminus JJQ57_RS25690 PF00690 Cation transporter/ATPase, N-terminus JJQ57_RS25695 PF13673 Acetyltransferase (GNAT) domain JJQ57_RS25705 PF12848 ABC transporter JJQ57_RS25705 PF00005 ABC transporter JJQ57_RS25720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS25720 PF08447 PAS fold JJQ57_RS25720 PF13426 PAS domain JJQ57_RS25725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25725 PF03466 LysR substrate binding domain JJQ57_RS25730 PF00491 Arginase family JJQ57_RS25745 PF00474 Sodium:solute symporter family JJQ57_RS25750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS25750 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS25750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS25755 PF01565 FAD binding domain JJQ57_RS25755 PF02913 FAD linked oxidases, C-terminal domain JJQ57_RS25760 PF16123 Hydroxyacylglutathione hydrolase C-terminus JJQ57_RS25760 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS25765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25765 PF03466 LysR substrate binding domain JJQ57_RS25775 PF00892 EamA-like transporter family JJQ57_RS25780 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS25785 PF00850 Histone deacetylase domain JJQ57_RS25790 PF12795 Mechanosensitive ion channel porin domain JJQ57_RS25790 PF12794 Mechanosensitive ion channel inner membrane domain 1 JJQ57_RS25790 PF00924 Mechanosensitive ion channel JJQ57_RS25795 PF02926 THUMP domain JJQ57_RS25795 PF01170 Putative RNA methylase family UPF0020 JJQ57_RS25795 PF10672 S-adenosylmethionine-dependent methyltransferase JJQ57_RS25805 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS25805 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS25805 PF12462 DNA helicase IV / RNA helicase N terminal JJQ57_RS25815 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS25830 PF00364 Biotin-requiring enzyme JJQ57_RS25830 PF02436 Conserved carboxylase domain JJQ57_RS25830 PF00682 HMGL-like JJQ57_RS25830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS25830 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS25830 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS25835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS25835 PF03466 LysR substrate binding domain JJQ57_RS25845 PF00072 Response regulator receiver domain JJQ57_RS25845 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS25850 PF00072 Response regulator receiver domain JJQ57_RS25850 PF01627 Hpt domain JJQ57_RS25850 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS25850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS25865 PF12833 Helix-turn-helix domain JJQ57_RS25865 PF06719 AraC-type transcriptional regulator N-terminus JJQ57_RS25870 PF00106 short chain dehydrogenase JJQ57_RS25880 PF00583 Acetyltransferase (GNAT) family JJQ57_RS25885 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JJQ57_RS25890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS25890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS25890 PF11890 Domain of unknown function (DUF3410) JJQ57_RS25895 PF01638 HxlR-like helix-turn-helix JJQ57_RS25900 PF00109 Beta-ketoacyl synthase, N-terminal domain JJQ57_RS25900 PF02801 Beta-ketoacyl synthase, C-terminal domain JJQ57_RS25925 PF02567 Phenazine biosynthesis-like protein JJQ57_RS25930 PF00593 TonB dependent receptor JJQ57_RS25930 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS25950 PF01554 MatE JJQ57_RS25955 PF00892 EamA-like transporter family JJQ57_RS25970 PF04073 Aminoacyl-tRNA editing domain JJQ57_RS25985 PF03795 YCII-related domain JJQ57_RS25995 PF07690 Major Facilitator Superfamily JJQ57_RS26000 PF04542 Sigma-70 region 2 JJQ57_RS26000 PF08281 Sigma-70, region 4 JJQ57_RS26010 PF03795 YCII-related domain JJQ57_RS26020 PF00072 Response regulator receiver domain JJQ57_RS26020 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS26025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JJQ57_RS26025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JJQ57_RS26025 PF01276 Orn/Lys/Arg decarboxylase, major domain JJQ57_RS26030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JJQ57_RS26030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JJQ57_RS26035 PF00106 short chain dehydrogenase JJQ57_RS26045 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS26050 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS26055 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS26060 PF00005 ABC transporter JJQ57_RS26070 PF00710 Asparaginase, N-terminal JJQ57_RS26070 PF17763 Glutaminase/Asparaginase C-terminal domain JJQ57_RS26075 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS26075 PF02743 Cache domain JJQ57_RS26075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS26080 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS26080 PF00072 Response regulator receiver domain JJQ57_RS26080 PF00158 Sigma-54 interaction domain JJQ57_RS26085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS26100 PF03741 Integral membrane protein TerC family JJQ57_RS26100 PF03471 Transporter associated domain JJQ57_RS26100 PF00571 CBS domain JJQ57_RS26105 PF00106 short chain dehydrogenase JJQ57_RS26115 PF03466 LysR substrate binding domain JJQ57_RS26115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26120 PF01223 DNA/RNA non-specific endonuclease JJQ57_RS26125 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS26125 PF00585 C-terminal regulatory domain of Threonine dehydratase JJQ57_RS26130 PF13474 SnoaL-like domain JJQ57_RS26145 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS26145 PF00593 TonB dependent receptor JJQ57_RS26150 PF01040 UbiA prenyltransferase family JJQ57_RS26155 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JJQ57_RS26160 PF00510 Cytochrome c oxidase subunit III JJQ57_RS26165 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS26170 PF06481 COX Aromatic Rich Motif JJQ57_RS26170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JJQ57_RS26175 PF07690 Major Facilitator Superfamily JJQ57_RS26180 PF08361 MAATS-type transcriptional repressor, C-terminal region JJQ57_RS26180 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS26190 PF07690 Major Facilitator Superfamily JJQ57_RS26195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26195 PF03466 LysR substrate binding domain JJQ57_RS26205 PF00266 Aminotransferase class-V JJQ57_RS26210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26210 PF03466 LysR substrate binding domain JJQ57_RS26220 PF13230 Glutamine amidotransferases class-II JJQ57_RS26235 PF00326 Prolyl oligopeptidase family JJQ57_RS26235 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JJQ57_RS26240 PF10502 Signal peptidase, peptidase S26 JJQ57_RS26250 PF16220 Domain of unknown function (DUF4880) JJQ57_RS26250 PF04773 FecR protein JJQ57_RS26255 PF08281 Sigma-70, region 4 JJQ57_RS26255 PF04542 Sigma-70 region 2 JJQ57_RS26260 PF03692 Putative zinc- or iron-chelating domain JJQ57_RS26265 PF02583 Metal-sensitive transcriptional repressor JJQ57_RS26270 PF01545 Cation efflux family JJQ57_RS26275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS26280 PF05166 YcgL domain JJQ57_RS26285 PF00570 HRDC domain JJQ57_RS26285 PF01612 3'-5' exonuclease JJQ57_RS26295 PF00581 Rhodanese-like domain JJQ57_RS26305 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS26315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JJQ57_RS26320 PF00255 Glutathione peroxidase JJQ57_RS26335 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS26335 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS26335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS26335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS26345 PF07690 Major Facilitator Superfamily JJQ57_RS26350 PF02654 Cobalamin-5-phosphate synthase JJQ57_RS26355 PF00300 Histidine phosphatase superfamily (branch 1) JJQ57_RS26360 PF02277 Phosphoribosyltransferase JJQ57_RS26365 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JJQ57_RS26370 PF07685 CobB/CobQ-like glutamine amidotransferase domain JJQ57_RS26370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ57_RS26375 PF00155 Aminotransferase class I and II JJQ57_RS26380 PF03186 CobD/Cbib protein JJQ57_RS26380 PF17113 Regulatory signalling modulator protein AmpE JJQ57_RS26385 PF00881 Nitroreductase family JJQ57_RS26390 PF07685 CobB/CobQ-like glutamine amidotransferase domain JJQ57_RS26390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JJQ57_RS26395 PF12557 Cob(I)alamin adenosyltransferase N terminal JJQ57_RS26395 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JJQ57_RS26400 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS26400 PF00593 TonB dependent receptor JJQ57_RS26410 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS26410 PF07729 FCD domain JJQ57_RS26415 PF05544 Proline racemase JJQ57_RS26420 PF01266 FAD dependent oxidoreductase JJQ57_RS26430 PF04324 BFD-like [2Fe-2S] binding domain JJQ57_RS26430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS26440 PF03466 LysR substrate binding domain JJQ57_RS26440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26455 PF07690 Major Facilitator Superfamily JJQ57_RS26465 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS26475 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS26485 PF00005 ABC transporter JJQ57_RS26490 PF05544 Proline racemase JJQ57_RS26495 PF00701 Dihydrodipicolinate synthetase family JJQ57_RS26500 PF00171 Aldehyde dehydrogenase family JJQ57_RS26505 PF02615 Malate/L-lactate dehydrogenase JJQ57_RS26510 PF00672 HAMP domain JJQ57_RS26510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JJQ57_RS26510 PF12729 Four helix bundle sensory module for signal transduction JJQ57_RS26515 PF02974 Protease inhibitor Inh JJQ57_RS26520 PF08548 Peptidase M10 serralysin C terminal JJQ57_RS26520 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JJQ57_RS26525 PF02321 Outer membrane efflux protein JJQ57_RS26530 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS26535 PF00664 ABC transporter transmembrane region JJQ57_RS26535 PF00005 ABC transporter JJQ57_RS26550 PF13426 PAS domain JJQ57_RS26550 PF00072 Response regulator receiver domain JJQ57_RS26550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS26565 PF00378 Enoyl-CoA hydratase/isomerase JJQ57_RS26575 PF02321 Outer membrane efflux protein JJQ57_RS26580 PF13533 Biotin-lipoyl like JJQ57_RS26585 PF07690 Major Facilitator Superfamily JJQ57_RS26590 PF12833 Helix-turn-helix domain JJQ57_RS26605 PF04632 Fusaric acid resistance protein family JJQ57_RS26610 PF13533 Biotin-lipoyl like JJQ57_RS26620 PF02311 AraC-like ligand binding domain JJQ57_RS26620 PF12833 Helix-turn-helix domain JJQ57_RS26640 PF02525 Flavodoxin-like fold JJQ57_RS26645 PF04371 Porphyromonas-type peptidyl-arginine deiminase JJQ57_RS26650 PF13416 Bacterial extracellular solute-binding protein JJQ57_RS26655 PF00795 Carbon-nitrogen hydrolase JJQ57_RS26660 PF04371 Porphyromonas-type peptidyl-arginine deiminase JJQ57_RS26665 PF03466 LysR substrate binding domain JJQ57_RS26665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26680 PF06725 3D domain JJQ57_RS26680 PF03562 MltA specific insert domain JJQ57_RS26685 PF00501 AMP-binding enzyme JJQ57_RS26685 PF00550 Phosphopantetheine attachment site JJQ57_RS26685 PF00668 Condensation domain JJQ57_RS26685 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS26705 PF00682 HMGL-like JJQ57_RS26715 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS26715 PF00501 AMP-binding enzyme JJQ57_RS26720 PF00733 Asparagine synthase JJQ57_RS26720 PF13537 Glutamine amidotransferase domain JJQ57_RS26730 PF07690 Major Facilitator Superfamily JJQ57_RS26740 PF02678 Pirin JJQ57_RS26740 PF17954 Quercetinase C-terminal cupin domain JJQ57_RS26750 PF00743 Flavin-binding monooxygenase-like JJQ57_RS26755 PF02254 TrkA-N domain JJQ57_RS26755 PF00999 Sodium/hydrogen exchanger family JJQ57_RS26765 PF05726 Pirin C-terminal cupin domain JJQ57_RS26765 PF02678 Pirin JJQ57_RS26770 PF03358 NADPH-dependent FMN reductase JJQ57_RS26780 PF00857 Isochorismatase family JJQ57_RS26785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26785 PF03466 LysR substrate binding domain JJQ57_RS26790 PF01596 O-methyltransferase JJQ57_RS26795 PF00877 NlpC/P60 family JJQ57_RS26800 PF00877 NlpC/P60 family JJQ57_RS26805 PF02146 Sir2 family JJQ57_RS26810 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS26810 PF13426 PAS domain JJQ57_RS26810 PF00158 Sigma-54 interaction domain JJQ57_RS26820 PF13520 Amino acid permease JJQ57_RS26825 PF03352 Methyladenine glycosylase JJQ57_RS26830 PF01171 PP-loop family JJQ57_RS26840 PF04893 Yip1 domain JJQ57_RS26845 PF17283 SprT-like zinc ribbon domain JJQ57_RS26845 PF10263 SprT-like family JJQ57_RS26850 PF02515 CoA-transferase family III JJQ57_RS26855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS26855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS26855 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS26860 PF00296 Luciferase-like monooxygenase JJQ57_RS26865 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS26865 PF02798 Glutathione S-transferase, N-terminal domain JJQ57_RS26870 PF03466 LysR substrate binding domain JJQ57_RS26870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS26875 PF00375 Sodium:dicarboxylate symporter family JJQ57_RS26885 PF13426 PAS domain JJQ57_RS26885 PF00563 EAL domain JJQ57_RS26885 PF08447 PAS fold JJQ57_RS26885 PF05231 MASE1 JJQ57_RS26885 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS26885 PF08448 PAS fold JJQ57_RS26890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS26895 PF00072 Response regulator receiver domain JJQ57_RS26895 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS26905 PF06796 Periplasmic nitrate reductase protein NapE JJQ57_RS26910 PF00037 4Fe-4S binding domain JJQ57_RS26910 PF13187 4Fe-4S dicluster domain JJQ57_RS26910 PF12800 4Fe-4S binding domain JJQ57_RS26915 PF03927 NapD protein JJQ57_RS26920 PF00384 Molybdopterin oxidoreductase JJQ57_RS26920 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS26920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JJQ57_RS26925 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JJQ57_RS26930 PF03264 NapC/NirT cytochrome c family, N-terminal region JJQ57_RS26935 PF13406 Transglycosylase SLT domain JJQ57_RS26940 PF03741 Integral membrane protein TerC family JJQ57_RS26945 PF00305 Lipoxygenase JJQ57_RS26955 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS26955 PF00072 Response regulator receiver domain JJQ57_RS26970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JJQ57_RS27000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS27005 PF07504 Fungalysin/Thermolysin Propeptide Motif JJQ57_RS27005 PF03413 Peptidase propeptide and YPEB domain JJQ57_RS27005 PF01447 Thermolysin metallopeptidase, catalytic domain JJQ57_RS27005 PF02868 Thermolysin metallopeptidase, alpha-helical domain JJQ57_RS27010 PF17768 RecJ OB domain JJQ57_RS27010 PF02272 DHHA1 domain JJQ57_RS27010 PF01368 DHH family JJQ57_RS27015 PF07152 YaeQ protein JJQ57_RS27025 PF17864 RuvB AAA lid domain JJQ57_RS27025 PF05496 Holliday junction DNA helicase RuvB P-loop domain JJQ57_RS27025 PF05491 RuvB C-terminal winged helix domain JJQ57_RS27050 PF02515 CoA-transferase family III JJQ57_RS27065 PF14821 Threonine synthase N terminus JJQ57_RS27065 PF00291 Pyridoxal-phosphate dependent enzyme JJQ57_RS27070 PF03447 Homoserine dehydrogenase, NAD binding domain JJQ57_RS27070 PF00742 Homoserine dehydrogenase JJQ57_RS27070 PF01842 ACT domain JJQ57_RS27075 PF10411 Disulfide bond isomerase protein N-terminus JJQ57_RS27075 PF13098 Thioredoxin-like domain JJQ57_RS27080 PF00589 Phage integrase family JJQ57_RS27080 PF02899 Phage integrase, N-terminal SAM-like domain JJQ57_RS27095 PF03061 Thioesterase superfamily JJQ57_RS27100 PF01245 Ribosomal protein L19 JJQ57_RS27105 PF01746 tRNA (Guanine-1)-methyltransferase JJQ57_RS27110 PF01782 RimM N-terminal domain JJQ57_RS27110 PF05239 PRC-barrel domain JJQ57_RS27115 PF00886 Ribosomal protein S16 JJQ57_RS27120 PF00448 SRP54-type protein, GTPase domain JJQ57_RS27120 PF02978 Signal peptide binding domain JJQ57_RS27120 PF02881 SRP54-type protein, helical bundle domain JJQ57_RS27130 PF03471 Transporter associated domain JJQ57_RS27130 PF00571 CBS domain JJQ57_RS27130 PF01595 Cyclin M transmembrane N-terminal domain JJQ57_RS27135 PF00083 Sugar (and other) transporter JJQ57_RS27135 PF07690 Major Facilitator Superfamily JJQ57_RS27145 PF01370 NAD dependent epimerase/dehydratase family JJQ57_RS27145 PF02222 ATP-grasp domain JJQ57_RS27155 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS27160 PF00293 NUDIX domain JJQ57_RS27165 PF00293 NUDIX domain JJQ57_RS27165 PF09297 NADH pyrophosphatase zinc ribbon domain JJQ57_RS27175 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS27175 PF07702 UTRA domain JJQ57_RS27180 PF01979 Amidohydrolase family JJQ57_RS27185 PF01380 SIS domain JJQ57_RS27190 PF05524 PEP-utilising enzyme, N-terminal JJQ57_RS27190 PF00391 PEP-utilising enzyme, mobile domain JJQ57_RS27190 PF02896 PEP-utilising enzyme, TIM barrel domain JJQ57_RS27190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JJQ57_RS27190 PF00381 PTS HPr component phosphorylation site JJQ57_RS27195 PF02378 Phosphotransferase system, EIIC JJQ57_RS27195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JJQ57_RS27195 PF00367 phosphotransferase system, EIIB JJQ57_RS27200 PF01784 NIF3 (NGG1p interacting factor 3) JJQ57_RS27210 PF02769 AIR synthase related protein, C-terminal domain JJQ57_RS27210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JJQ57_RS27210 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JJQ57_RS27215 PF01464 Transglycosylase SLT domain JJQ57_RS27215 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS27235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JJQ57_RS27240 PF00394 Multicopper oxidase JJQ57_RS27240 PF07732 Multicopper oxidase JJQ57_RS27240 PF07731 Multicopper oxidase JJQ57_RS27245 PF00958 GMP synthase C terminal domain JJQ57_RS27245 PF02540 NAD synthase JJQ57_RS27245 PF00117 Glutamine amidotransferase class-I JJQ57_RS27250 PF00571 CBS domain JJQ57_RS27250 PF00478 IMP dehydrogenase / GMP reductase domain JJQ57_RS27255 PF00072 Response regulator receiver domain JJQ57_RS27255 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS27270 PF00850 Histone deacetylase domain JJQ57_RS27280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS27280 PF03466 LysR substrate binding domain JJQ57_RS27285 PF13742 OB-fold nucleic acid binding domain JJQ57_RS27285 PF02601 Exonuclease VII, large subunit JJQ57_RS27290 PF03466 LysR substrate binding domain JJQ57_RS27290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS27295 PF03480 Bacterial extracellular solute-binding protein, family 7 JJQ57_RS27305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JJQ57_RS27315 PF01965 DJ-1/PfpI family JJQ57_RS27315 PF12833 Helix-turn-helix domain JJQ57_RS27320 PF00857 Isochorismatase family JJQ57_RS27330 PF04314 Copper chaperone PCu(A)C JJQ57_RS27340 PF01551 Peptidase family M23 JJQ57_RS27340 PF08525 Opacity-associated protein A N-terminal motif JJQ57_RS27340 PF01476 LysM domain JJQ57_RS27355 PF00593 TonB dependent receptor JJQ57_RS27355 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS27365 PF00682 HMGL-like JJQ57_RS27365 PF08502 LeuA allosteric (dimerisation) domain JJQ57_RS27380 PF00248 Aldo/keto reductase family JJQ57_RS27390 PF00795 Carbon-nitrogen hydrolase JJQ57_RS27395 PF00155 Aminotransferase class I and II JJQ57_RS27400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JJQ57_RS27400 PF01926 50S ribosome-binding GTPase JJQ57_RS27405 PF13360 PQQ-like domain JJQ57_RS27415 PF03129 Anticodon binding domain JJQ57_RS27415 PF13393 Histidyl-tRNA synthetase JJQ57_RS27420 PF04551 GcpE protein JJQ57_RS27425 PF13464 Domain of unknown function (DUF4115) JJQ57_RS27435 PF04055 Radical SAM superfamily JJQ57_RS27440 PF00334 Nucleoside diphosphate kinase JJQ57_RS27445 PF04384 Iron-sulphur cluster assembly JJQ57_RS27450 PF00111 2Fe-2S iron-sulfur cluster binding domain JJQ57_RS27455 PF00012 Hsp70 protein JJQ57_RS27460 PF00226 DnaJ domain JJQ57_RS27460 PF07743 HSCB C-terminal oligomerisation domain JJQ57_RS27465 PF01521 Iron-sulphur cluster biosynthesis JJQ57_RS27470 PF01592 NifU-like N terminal domain JJQ57_RS27475 PF00266 Aminotransferase class-V JJQ57_RS27480 PF02082 Transcriptional regulator JJQ57_RS27485 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS27485 PF06426 Serine acetyltransferase, N-terminal JJQ57_RS27490 PF00588 SpoU rRNA Methylase family JJQ57_RS27495 PF00459 Inositol monophosphatase family JJQ57_RS27500 PF05433 Glycine zipper 2TM domain JJQ57_RS27505 PF07549 SecD/SecF GG Motif JJQ57_RS27505 PF02355 Protein export membrane protein JJQ57_RS27510 PF02355 Protein export membrane protein JJQ57_RS27510 PF07549 SecD/SecF GG Motif JJQ57_RS27510 PF13721 SecD export protein N-terminal TM region JJQ57_RS27515 PF02699 Preprotein translocase subunit JJQ57_RS27520 PF01702 Queuine tRNA-ribosyltransferase JJQ57_RS27525 PF02547 Queuosine biosynthesis protein JJQ57_RS27535 PF12792 CSS motif domain associated with EAL JJQ57_RS27535 PF00563 EAL domain JJQ57_RS27545 PF03739 Lipopolysaccharide export system permease LptF/LptG JJQ57_RS27550 PF03739 Lipopolysaccharide export system permease LptF/LptG JJQ57_RS27560 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS27560 PF12833 Helix-turn-helix domain JJQ57_RS27565 PF00883 Cytosol aminopeptidase family, catalytic domain JJQ57_RS27565 PF02789 Cytosol aminopeptidase family, N-terminal domain JJQ57_RS27570 PF04364 DNA polymerase III chi subunit, HolC JJQ57_RS27580 PF10458 Valyl tRNA synthetase tRNA binding arm JJQ57_RS27580 PF00133 tRNA synthetases class I (I, L, M and V) JJQ57_RS27580 PF08264 Anticodon-binding domain of tRNA JJQ57_RS27595 PF02653 Branched-chain amino acid transport system / permease component JJQ57_RS27600 PF00005 ABC transporter JJQ57_RS27605 PF02080 TrkA-C domain JJQ57_RS27605 PF03600 Citrate transporter JJQ57_RS27610 PF05971 RNA methyltransferase JJQ57_RS27630 PF00107 Zinc-binding dehydrogenase JJQ57_RS27630 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS27640 PF03466 LysR substrate binding domain JJQ57_RS27640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS27660 PF04245 37-kD nucleoid-associated bacterial protein JJQ57_RS27680 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS27685 PF01541 GIY-YIG catalytic domain JJQ57_RS27700 PF01066 CDP-alcohol phosphatidyltransferase JJQ57_RS27705 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS27710 PF02230 Phospholipase/Carboxylesterase JJQ57_RS27715 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS27715 PF00501 AMP-binding enzyme JJQ57_RS27720 PF00271 Helicase conserved C-terminal domain JJQ57_RS27720 PF00270 DEAD/DEAH box helicase JJQ57_RS27725 PF02423 Ornithine cyclodeaminase/mu-crystallin family JJQ57_RS27730 PF01266 FAD dependent oxidoreductase JJQ57_RS27735 PF08348 YheO-like PAS domain JJQ57_RS27735 PF13309 HTH domain JJQ57_RS27740 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS27745 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS27745 PF00593 TonB dependent receptor JJQ57_RS27755 PF06463 Molybdenum Cofactor Synthesis C JJQ57_RS27755 PF04055 Radical SAM superfamily JJQ57_RS27760 PF09312 SurA N-terminal domain JJQ57_RS27760 PF00639 PPIC-type PPIASE domain JJQ57_RS27765 PF02665 Nitrate reductase gamma subunit JJQ57_RS27770 PF02613 Nitrate reductase delta subunit JJQ57_RS27775 PF14711 Respiratory nitrate reductase beta C-terminal JJQ57_RS27775 PF13247 4Fe-4S dicluster domain JJQ57_RS27780 PF14710 Respiratory nitrate reductase alpha N-terminal JJQ57_RS27780 PF00384 Molybdopterin oxidoreductase JJQ57_RS27780 PF01568 Molydopterin dinucleotide binding domain JJQ57_RS27785 PF07690 Major Facilitator Superfamily JJQ57_RS27790 PF07690 Major Facilitator Superfamily JJQ57_RS27795 PF00672 HAMP domain JJQ57_RS27795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS27795 PF07730 Histidine kinase JJQ57_RS27795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JJQ57_RS27800 PF00072 Response regulator receiver domain JJQ57_RS27800 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS27805 PF08859 DGC domain JJQ57_RS27815 PF08241 Methyltransferase domain JJQ57_RS27820 PF00106 short chain dehydrogenase JJQ57_RS27845 PF00999 Sodium/hydrogen exchanger family JJQ57_RS27850 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS27855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS27860 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS27865 PF00571 CBS domain JJQ57_RS27865 PF00005 ABC transporter JJQ57_RS27870 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS27870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS27880 PF04632 Fusaric acid resistance protein family JJQ57_RS27885 PF02321 Outer membrane efflux protein JJQ57_RS27890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS27890 PF03466 LysR substrate binding domain JJQ57_RS27895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JJQ57_RS27895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JJQ57_RS27900 PF00892 EamA-like transporter family JJQ57_RS27905 PF12833 Helix-turn-helix domain JJQ57_RS27905 PF01965 DJ-1/PfpI family JJQ57_RS27910 PF04542 Sigma-70 region 2 JJQ57_RS27910 PF08281 Sigma-70, region 4 JJQ57_RS27915 PF04773 FecR protein JJQ57_RS27915 PF16220 Domain of unknown function (DUF4880) JJQ57_RS27920 PF00593 TonB dependent receptor JJQ57_RS27920 PF07660 Secretin and TonB N terminus short domain JJQ57_RS27920 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS27930 PF16658 Class II release factor RF3, C-terminal domain JJQ57_RS27930 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS27930 PF03144 Elongation factor Tu domain 2 JJQ57_RS27965 PF16655 PhoD-like phosphatase, N-terminal domain JJQ57_RS27965 PF09423 PhoD-like phosphatase JJQ57_RS27970 PF02036 SCP-2 sterol transfer family JJQ57_RS27975 PF01136 Peptidase family U32 JJQ57_RS27980 PF01136 Peptidase family U32 JJQ57_RS27985 PF00994 Probable molybdopterin binding domain JJQ57_RS27985 PF03454 MoeA C-terminal region (domain IV) JJQ57_RS27985 PF03453 MoeA N-terminal region (domain I and II) JJQ57_RS27990 PF00994 Probable molybdopterin binding domain JJQ57_RS27995 PF02391 MoaE protein JJQ57_RS28000 PF02597 ThiS family JJQ57_RS28005 PF01967 MoaC family JJQ57_RS28025 PF02562 PhoH-like protein JJQ57_RS28025 PF13638 PIN domain JJQ57_RS28030 PF00403 Heavy-metal-associated domain JJQ57_RS28035 PF17874 MalT-like TPR region JJQ57_RS28035 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS28040 PF07044 Protein of unknown function (DUF1329) JJQ57_RS28050 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS28050 PF00501 AMP-binding enzyme JJQ57_RS28055 PF02803 Thiolase, C-terminal domain JJQ57_RS28055 PF00108 Thiolase, N-terminal domain JJQ57_RS28065 PF12833 Helix-turn-helix domain JJQ57_RS28065 PF02311 AraC-like ligand binding domain JJQ57_RS28075 PF02322 Cytochrome bd terminal oxidase subunit II JJQ57_RS28080 PF01654 Cytochrome bd terminal oxidase subunit I JJQ57_RS28085 PF03180 NLPA lipoprotein JJQ57_RS28090 PF00158 Sigma-54 interaction domain JJQ57_RS28095 PF02028 BCCT, betaine/carnitine/choline family transporter JJQ57_RS28100 PF03169 OPT oligopeptide transporter protein JJQ57_RS28105 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JJQ57_RS28110 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS28115 PF00005 ABC transporter JJQ57_RS28120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS28130 PF00216 Bacterial DNA-binding protein JJQ57_RS28150 PF13302 Acetyltransferase (GNAT) domain JJQ57_RS28155 PF13302 Acetyltransferase (GNAT) domain JJQ57_RS28160 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS28160 PF00989 PAS fold JJQ57_RS28160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS28160 PF00072 Response regulator receiver domain JJQ57_RS28160 PF00497 Bacterial extracellular solute-binding proteins, family 3 JJQ57_RS28160 PF01627 Hpt domain JJQ57_RS28165 PF13426 PAS domain JJQ57_RS28165 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS28165 PF00563 EAL domain JJQ57_RS28170 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS28170 PF00072 Response regulator receiver domain JJQ57_RS28175 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS28175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS28180 PF00271 Helicase conserved C-terminal domain JJQ57_RS28180 PF00270 DEAD/DEAH box helicase JJQ57_RS28190 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JJQ57_RS28200 PF00296 Luciferase-like monooxygenase JJQ57_RS28215 PF00106 short chain dehydrogenase JJQ57_RS28235 PF08482 ATP-dependent helicase C-terminal JJQ57_RS28235 PF00271 Helicase conserved C-terminal domain JJQ57_RS28235 PF04408 Helicase associated domain (HA2) JJQ57_RS28235 PF00270 DEAD/DEAH box helicase JJQ57_RS28245 PF16916 Dimerisation domain of Zinc Transporter JJQ57_RS28245 PF01545 Cation efflux family JJQ57_RS28255 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS28270 PF00849 RNA pseudouridylate synthase JJQ57_RS28275 PF12706 Beta-lactamase superfamily domain JJQ57_RS28280 PF02810 SEC-C motif JJQ57_RS28280 PF07517 SecA DEAD-like domain JJQ57_RS28280 PF07516 SecA Wing and Scaffold domain JJQ57_RS28280 PF01043 SecA preprotein cross-linking domain JJQ57_RS28285 PF01048 Phosphorylase superfamily JJQ57_RS28285 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JJQ57_RS28295 PF18158 Adaptive response protein AidB N-terminal domain JJQ57_RS28295 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS28295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS28305 PF00072 Response regulator receiver domain JJQ57_RS28305 PF01627 Hpt domain JJQ57_RS28305 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS28305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS28310 PF08543 Phosphomethylpyrimidine kinase JJQ57_RS28315 PF02581 Thiamine monophosphate synthase JJQ57_RS28320 PF00202 Aminotransferase class-III JJQ57_RS28335 PF00919 Uncharacterized protein family UPF0004 JJQ57_RS28335 PF01938 TRAM domain JJQ57_RS28335 PF04055 Radical SAM superfamily JJQ57_RS28340 PF02562 PhoH-like protein JJQ57_RS28345 PF02130 Uncharacterized protein family UPF0054 JJQ57_RS28350 PF00571 CBS domain JJQ57_RS28350 PF03471 Transporter associated domain JJQ57_RS28355 PF00795 Carbon-nitrogen hydrolase JJQ57_RS28360 PF02698 DUF218 domain JJQ57_RS28370 PF13603 Leucyl-tRNA synthetase, Domain 2 JJQ57_RS28370 PF09334 tRNA synthetases class I (M) JJQ57_RS28370 PF08264 Anticodon-binding domain of tRNA JJQ57_RS28370 PF00133 tRNA synthetases class I (I, L, M and V) JJQ57_RS28395 PF13406 Transglycosylase SLT domain JJQ57_RS28405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS28405 PF03466 LysR substrate binding domain JJQ57_RS28410 PF04055 Radical SAM superfamily JJQ57_RS28410 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JJQ57_RS28415 PF03099 Biotin/lipoate A/B protein ligase family JJQ57_RS28420 PF04359 Protein of unknown function (DUF493) JJQ57_RS28425 PF07943 Penicillin-binding protein 5, C-terminal domain JJQ57_RS28425 PF00768 D-alanyl-D-alanine carboxypeptidase JJQ57_RS28430 PF05036 Sporulation related domain JJQ57_RS28430 PF03330 Lytic transglycolase JJQ57_RS28435 PF13406 Transglycosylase SLT domain JJQ57_RS28440 PF01098 Cell cycle protein JJQ57_RS28445 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS28445 PF03717 Penicillin-binding Protein dimerisation domain JJQ57_RS28450 PF02590 Predicted SPOUT methyltransferase JJQ57_RS28460 PF01467 Cytidylyltransferase-like JJQ57_RS28465 PF00171 Aldehyde dehydrogenase family JJQ57_RS28480 PF02245 Methylpurine-DNA glycosylase (MPG) JJQ57_RS28485 PF09335 SNARE associated Golgi protein JJQ57_RS28495 PF04172 LrgB-like family JJQ57_RS28500 PF03788 LrgA family JJQ57_RS28505 PF01575 MaoC like domain JJQ57_RS28515 PF13460 NAD(P)H-binding JJQ57_RS28525 PF02441 Flavoprotein JJQ57_RS28530 PF02875 Mur ligase family, glutamate ligase domain JJQ57_RS28530 PF08245 Mur ligase middle domain JJQ57_RS28530 PF01225 Mur ligase family, catalytic domain JJQ57_RS28535 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS28535 PF00158 Sigma-54 interaction domain JJQ57_RS28535 PF01590 GAF domain JJQ57_RS28540 PF00171 Aldehyde dehydrogenase family JJQ57_RS28545 PF13520 Amino acid permease JJQ57_RS28550 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JJQ57_RS28555 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JJQ57_RS28560 PF00583 Acetyltransferase (GNAT) family JJQ57_RS28570 PF00069 Protein kinase domain JJQ57_RS28575 PF09335 SNARE associated Golgi protein JJQ57_RS28580 PF06167 Glucose-regulated metallo-peptidase M90 JJQ57_RS28585 PF00719 Inorganic pyrophosphatase JJQ57_RS28590 PF00072 Response regulator receiver domain JJQ57_RS28590 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS28600 PF00230 Major intrinsic protein JJQ57_RS28610 PF00989 PAS fold JJQ57_RS28610 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS28610 PF00672 HAMP domain JJQ57_RS28610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS28610 PF18698 Histidine kinase sensor domain JJQ57_RS28615 PF00005 ABC transporter JJQ57_RS28635 PF13378 Enolase C-terminal domain-like JJQ57_RS28640 PF02609 Exonuclease VII small subunit JJQ57_RS28645 PF00348 Polyprenyl synthetase JJQ57_RS28650 PF02780 Transketolase, C-terminal domain JJQ57_RS28650 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS28650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JJQ57_RS28655 PF01497 Periplasmic binding protein JJQ57_RS28665 PF00925 GTP cyclohydrolase II JJQ57_RS28680 PF04608 Phosphatidylglycerophosphatase A JJQ57_RS28685 PF00586 AIR synthase related protein, N-terminal domain JJQ57_RS28685 PF02769 AIR synthase related protein, C-terminal domain JJQ57_RS28690 PF01029 NusB family JJQ57_RS28695 PF00885 6,7-dimethyl-8-ribityllumazine synthase JJQ57_RS28700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JJQ57_RS28700 PF00925 GTP cyclohydrolase II JJQ57_RS28705 PF00677 Lumazine binding domain JJQ57_RS28710 PF01872 RibD C-terminal domain JJQ57_RS28710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JJQ57_RS28715 PF03477 ATP cone domain JJQ57_RS28730 PF00085 Thioredoxin JJQ57_RS28745 PF12704 MacB-like periplasmic core domain JJQ57_RS28745 PF02687 FtsX-like permease family JJQ57_RS28745 PF00005 ABC transporter JJQ57_RS28760 PF03922 OmpW family JJQ57_RS28765 PF04247 Invasion gene expression up-regulator, SirB JJQ57_RS28770 PF16363 GDP-mannose 4,6 dehydratase JJQ57_RS28780 PF12852 Cupin JJQ57_RS28780 PF12833 Helix-turn-helix domain JJQ57_RS28790 PF13520 Amino acid permease JJQ57_RS28795 PF00171 Aldehyde dehydrogenase family JJQ57_RS28815 PF09856 Predicted transcriptional regulator (DUF2083) JJQ57_RS28815 PF06114 IrrE N-terminal-like domain JJQ57_RS28815 PF01381 Helix-turn-helix JJQ57_RS28820 PF00668 Condensation domain JJQ57_RS28820 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS28820 PF00550 Phosphopantetheine attachment site JJQ57_RS28820 PF00501 AMP-binding enzyme JJQ57_RS28825 PF00106 short chain dehydrogenase JJQ57_RS28830 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS28830 PF00072 Response regulator receiver domain JJQ57_RS28840 PF05860 haemagglutination activity domain JJQ57_RS28845 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ57_RS28845 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ57_RS28850 PF13953 PapC C-terminal domain JJQ57_RS28850 PF13954 PapC N-terminal domain JJQ57_RS28850 PF00577 Outer membrane usher protein JJQ57_RS28855 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JJQ57_RS28855 PF02753 Pili assembly chaperone PapD, C-terminal domain JJQ57_RS28865 PF17409 MoaF C-terminal domain JJQ57_RS28865 PF10703 MoaF N-terminal domain JJQ57_RS28870 PF00202 Aminotransferase class-III JJQ57_RS28885 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JJQ57_RS28885 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JJQ57_RS28890 PF01613 Flavin reductase like domain JJQ57_RS28905 PF00665 Integrase core domain JJQ57_RS28910 PF07690 Major Facilitator Superfamily JJQ57_RS28925 PF00355 Rieske [2Fe-2S] domain JJQ57_RS28945 PF07690 Major Facilitator Superfamily JJQ57_RS28950 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS28950 PF00107 Zinc-binding dehydrogenase JJQ57_RS28965 PF05199 GMC oxidoreductase JJQ57_RS28965 PF00732 GMC oxidoreductase JJQ57_RS28975 PF03466 LysR substrate binding domain JJQ57_RS28975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS28980 PF11871 Domain of unknown function (DUF3391) JJQ57_RS28980 PF01966 HD domain JJQ57_RS28990 PF03466 LysR substrate binding domain JJQ57_RS28990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS28995 PF00144 Beta-lactamase JJQ57_RS29005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JJQ57_RS29005 PF00672 HAMP domain JJQ57_RS29005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS29005 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS29005 PF01627 Hpt domain JJQ57_RS29005 PF00072 Response regulator receiver domain JJQ57_RS29010 PF07690 Major Facilitator Superfamily JJQ57_RS29020 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JJQ57_RS29020 PF11892 Domain of unknown function (DUF3412) JJQ57_RS29020 PF03641 Possible lysine decarboxylase JJQ57_RS29030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS29030 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS29030 PF08446 PAS fold JJQ57_RS29030 PF00360 Phytochrome region JJQ57_RS29030 PF01590 GAF domain JJQ57_RS29040 PF01636 Phosphotransferase enzyme family JJQ57_RS29050 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS29055 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS29060 PF00171 Aldehyde dehydrogenase family JJQ57_RS29065 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JJQ57_RS29070 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JJQ57_RS29075 PF07690 Major Facilitator Superfamily JJQ57_RS29080 PF01557 Fumarylacetoacetate (FAA) hydrolase family JJQ57_RS29085 PF03328 HpcH/HpaI aldolase/citrate lyase family JJQ57_RS29095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JJQ57_RS29095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JJQ57_RS29100 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JJQ57_RS29100 PF12801 4Fe-4S binding domain JJQ57_RS29100 PF13746 4Fe-4S dicluster domain JJQ57_RS29105 PF00155 Aminotransferase class I and II JJQ57_RS29105 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS29110 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS29120 PF01047 MarR family JJQ57_RS29125 PF07690 Major Facilitator Superfamily JJQ57_RS29130 PF03573 outer membrane porin, OprD family JJQ57_RS29135 PF00579 tRNA synthetases class I (W and Y) JJQ57_RS29160 PF00005 ABC transporter JJQ57_RS29160 PF00664 ABC transporter transmembrane region JJQ57_RS29160 PF03412 Peptidase C39 family JJQ57_RS29180 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS29180 PF00158 Sigma-54 interaction domain JJQ57_RS29180 PF01590 GAF domain JJQ57_RS29190 PF01513 ATP-NAD kinase JJQ57_RS29195 PF00676 Dehydrogenase E1 component JJQ57_RS29200 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS29200 PF02780 Transketolase, C-terminal domain JJQ57_RS29205 PF00364 Biotin-requiring enzyme JJQ57_RS29205 PF00561 alpha/beta hydrolase fold JJQ57_RS29210 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS29210 PF00107 Zinc-binding dehydrogenase JJQ57_RS29215 PF08239 Bacterial SH3 domain JJQ57_RS29220 PF00296 Luciferase-like monooxygenase JJQ57_RS29225 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS29235 PF00005 ABC transporter JJQ57_RS29240 PF01497 Periplasmic binding protein JJQ57_RS29245 PF01032 FecCD transport family JJQ57_RS29250 PF01032 FecCD transport family JJQ57_RS29255 PF01425 Amidase JJQ57_RS29265 PF00155 Aminotransferase class I and II JJQ57_RS29265 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS29275 PF00248 Aldo/keto reductase family JJQ57_RS29280 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS29280 PF00593 TonB dependent receptor JJQ57_RS29280 PF07660 Secretin and TonB N terminus short domain JJQ57_RS29285 PF02082 Transcriptional regulator JJQ57_RS29290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS29295 PF01965 DJ-1/PfpI family JJQ57_RS29305 PF01042 Endoribonuclease L-PSP JJQ57_RS29310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS29310 PF03466 LysR substrate binding domain JJQ57_RS29320 PF05698 Bacterial trigger factor protein (TF) C-terminus JJQ57_RS29330 PF13649 Methyltransferase domain JJQ57_RS29335 PF03573 outer membrane porin, OprD family JJQ57_RS29340 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS29340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS29340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS29360 PF01965 DJ-1/PfpI family JJQ57_RS29360 PF12833 Helix-turn-helix domain JJQ57_RS29365 PF07729 FCD domain JJQ57_RS29365 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS29375 PF00083 Sugar (and other) transporter JJQ57_RS29380 PF00701 Dihydrodipicolinate synthetase family JJQ57_RS29385 PF00171 Aldehyde dehydrogenase family JJQ57_RS29395 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS29395 PF00072 Response regulator receiver domain JJQ57_RS29400 PF00989 PAS fold JJQ57_RS29400 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS29400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS29405 PF00501 AMP-binding enzyme JJQ57_RS29405 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS29410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS29410 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS29410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS29410 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS29415 PF00753 Metallo-beta-lactamase superfamily JJQ57_RS29420 PF07478 D-ala D-ala ligase C-terminus JJQ57_RS29420 PF01820 D-ala D-ala ligase N-terminus JJQ57_RS29425 PF03060 Nitronate monooxygenase JJQ57_RS29430 PF03466 LysR substrate binding domain JJQ57_RS29430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS29435 PF10282 Lactonase, 7-bladed beta-propeller JJQ57_RS29445 PF13533 Biotin-lipoyl like JJQ57_RS29450 PF00873 AcrB/AcrD/AcrF family JJQ57_RS29455 PF02321 Outer membrane efflux protein JJQ57_RS29460 PF00891 O-methyltransferase domain JJQ57_RS29460 PF16864 Dimerisation domain JJQ57_RS29465 PF03284 Phenazine biosynthesis protein A/B JJQ57_RS29470 PF03284 Phenazine biosynthesis protein A/B JJQ57_RS29475 PF01474 Class-II DAHP synthetase family JJQ57_RS29480 PF00857 Isochorismatase family JJQ57_RS29485 PF00425 chorismate binding enzyme JJQ57_RS29485 PF00117 Glutamine amidotransferase class-I JJQ57_RS29490 PF02567 Phenazine biosynthesis-like protein JJQ57_RS29495 PF01243 Pyridoxamine 5'-phosphate oxidase JJQ57_RS29495 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JJQ57_RS29500 PF01494 FAD binding domain JJQ57_RS29510 PF03929 PepSY-associated TM region JJQ57_RS29520 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS29520 PF00593 TonB dependent receptor JJQ57_RS29525 PF00005 ABC transporter JJQ57_RS29530 PF04954 Siderophore-interacting protein JJQ57_RS29530 PF08021 Siderophore-interacting FAD-binding domain JJQ57_RS29530 PF00005 ABC transporter JJQ57_RS29530 PF00664 ABC transporter transmembrane region JJQ57_RS29540 PF00550 Phosphopantetheine attachment site JJQ57_RS29540 PF00668 Condensation domain JJQ57_RS29540 PF00501 AMP-binding enzyme JJQ57_RS29540 PF08242 Methyltransferase domain JJQ57_RS29545 PF00550 Phosphopantetheine attachment site JJQ57_RS29545 PF00668 Condensation domain JJQ57_RS29545 PF00501 AMP-binding enzyme JJQ57_RS29545 PF08242 Methyltransferase domain JJQ57_RS29550 PF12833 Helix-turn-helix domain JJQ57_RS29555 PF00501 AMP-binding enzyme JJQ57_RS29555 PF13193 AMP-binding enzyme C-terminal domain JJQ57_RS29560 PF00975 Thioesterase domain JJQ57_RS29565 PF01817 Chorismate mutase type II JJQ57_RS29570 PF00425 chorismate binding enzyme JJQ57_RS29575 PF00436 Single-strand binding protein family JJQ57_RS29580 PF07690 Major Facilitator Superfamily JJQ57_RS29585 PF17755 UvrA DNA-binding domain JJQ57_RS29585 PF17760 UvrA interaction domain JJQ57_RS29590 PF00210 Ferritin-like domain JJQ57_RS29595 PF06628 Catalase-related immune-responsive JJQ57_RS29595 PF00199 Catalase JJQ57_RS29600 PF01196 Ribosomal protein L17 JJQ57_RS29605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JJQ57_RS29605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JJQ57_RS29605 PF01000 RNA polymerase Rpb3/RpoA insert domain JJQ57_RS29610 PF01479 S4 domain JJQ57_RS29610 PF00163 Ribosomal protein S4/S9 N-terminal domain JJQ57_RS29615 PF00411 Ribosomal protein S11 JJQ57_RS29620 PF00416 Ribosomal protein S13/S18 JJQ57_RS29625 PF00444 Ribosomal protein L36 JJQ57_RS29630 PF00344 SecY translocase JJQ57_RS29635 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JJQ57_RS29640 PF00327 Ribosomal protein L30p/L7e JJQ57_RS29645 PF03719 Ribosomal protein S5, C-terminal domain JJQ57_RS29645 PF00333 Ribosomal protein S5, N-terminal domain JJQ57_RS29650 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JJQ57_RS29655 PF00347 Ribosomal protein L6 JJQ57_RS29660 PF00410 Ribosomal protein S8 JJQ57_RS29665 PF00253 Ribosomal protein S14p/S29e JJQ57_RS29670 PF00673 ribosomal L5P family C-terminus JJQ57_RS29670 PF00281 Ribosomal protein L5 JJQ57_RS29675 PF00467 KOW motif JJQ57_RS29675 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JJQ57_RS29680 PF00238 Ribosomal protein L14p/L23e JJQ57_RS29685 PF00366 Ribosomal protein S17 JJQ57_RS29690 PF00831 Ribosomal L29 protein JJQ57_RS29695 PF00252 Ribosomal protein L16p/L10e JJQ57_RS29700 PF07650 KH domain JJQ57_RS29700 PF00189 Ribosomal protein S3, C-terminal domain JJQ57_RS29705 PF00237 Ribosomal protein L22p/L17e JJQ57_RS29710 PF00203 Ribosomal protein S19 JJQ57_RS29715 PF00181 Ribosomal Proteins L2, RNA binding domain JJQ57_RS29715 PF03947 Ribosomal Proteins L2, C-terminal domain JJQ57_RS29720 PF00276 Ribosomal protein L23 JJQ57_RS29725 PF00573 Ribosomal protein L4/L1 family JJQ57_RS29730 PF00297 Ribosomal protein L3 JJQ57_RS29735 PF00338 Ribosomal protein S10p/S20e JJQ57_RS29740 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS29740 PF03144 Elongation factor Tu domain 2 JJQ57_RS29740 PF03143 Elongation factor Tu C-terminal domain JJQ57_RS29745 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS29745 PF00679 Elongation factor G C-terminus JJQ57_RS29745 PF03144 Elongation factor Tu domain 2 JJQ57_RS29745 PF14492 Elongation Factor G, domain II JJQ57_RS29745 PF03764 Elongation factor G, domain IV JJQ57_RS29750 PF00177 Ribosomal protein S7p/S5e JJQ57_RS29755 PF00164 Ribosomal protein S12/S23 JJQ57_RS29760 PF05000 RNA polymerase Rpb1, domain 4 JJQ57_RS29760 PF04997 RNA polymerase Rpb1, domain 1 JJQ57_RS29760 PF00623 RNA polymerase Rpb1, domain 2 JJQ57_RS29760 PF04983 RNA polymerase Rpb1, domain 3 JJQ57_RS29760 PF04998 RNA polymerase Rpb1, domain 5 JJQ57_RS29765 PF04565 RNA polymerase Rpb2, domain 3 JJQ57_RS29765 PF04560 RNA polymerase Rpb2, domain 7 JJQ57_RS29765 PF00562 RNA polymerase Rpb2, domain 6 JJQ57_RS29765 PF04561 RNA polymerase Rpb2, domain 2 JJQ57_RS29765 PF10385 RNA polymerase beta subunit external 1 domain JJQ57_RS29765 PF04563 RNA polymerase beta subunit JJQ57_RS29770 PF00542 Ribosomal protein L7/L12 C-terminal domain JJQ57_RS29770 PF16320 Ribosomal protein L7/L12 dimerisation domain JJQ57_RS29775 PF00466 Ribosomal protein L10 JJQ57_RS29780 PF00687 Ribosomal protein L1p/L10e family JJQ57_RS29785 PF00298 Ribosomal protein L11, RNA binding domain JJQ57_RS29785 PF03946 Ribosomal protein L11, N-terminal domain JJQ57_RS29790 PF02357 Transcription termination factor nusG JJQ57_RS29790 PF00467 KOW motif JJQ57_RS29795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JJQ57_RS29805 PF03144 Elongation factor Tu domain 2 JJQ57_RS29805 PF00009 Elongation factor Tu GTP binding domain JJQ57_RS29805 PF03143 Elongation factor Tu C-terminal domain JJQ57_RS29830 PF03309 Type III pantothenate kinase JJQ57_RS29835 PF03099 Biotin/lipoate A/B protein ligase family JJQ57_RS29835 PF02237 Biotin protein ligase C terminal domain JJQ57_RS29835 PF08279 HTH domain JJQ57_RS29865 PF00579 tRNA synthetases class I (W and Y) JJQ57_RS29870 PF04225 Opacity-associated protein A LysM-like domain JJQ57_RS29870 PF01551 Peptidase family M23 JJQ57_RS29875 PF03702 Anhydro-N-acetylmuramic acid kinase JJQ57_RS29880 PF01521 Iron-sulphur cluster biosynthesis JJQ57_RS29895 PF02774 Semialdehyde dehydrogenase, dimerisation domain JJQ57_RS29895 PF01118 Semialdehyde dehydrogenase, NAD binding domain JJQ57_RS29900 PF03653 Uncharacterised protein family (UPF0093) JJQ57_RS29905 PF03060 Nitronate monooxygenase JJQ57_RS29915 PF00106 short chain dehydrogenase JJQ57_RS29920 PF01434 Peptidase family M41 JJQ57_RS29920 PF06480 FtsH Extracellular JJQ57_RS29920 PF17862 AAA+ lid domain JJQ57_RS29920 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS29925 PF01230 HIT domain JJQ57_RS29930 PF03232 Ubiquinone biosynthesis protein COQ7 JJQ57_RS29935 PF02675 S-adenosylmethionine decarboxylase JJQ57_RS29940 PF02566 OsmC-like protein JJQ57_RS29945 PF13545 Crp-like helix-turn-helix domain JJQ57_RS29945 PF00027 Cyclic nucleotide-binding domain JJQ57_RS29950 PF00218 Indole-3-glycerol phosphate synthase JJQ57_RS29955 PF00591 Glycosyl transferase family, a/b domain JJQ57_RS29955 PF02885 Glycosyl transferase family, helical bundle domain JJQ57_RS29960 PF00117 Glutamine amidotransferase class-I JJQ57_RS29975 PF00182 Chitinase class I JJQ57_RS30010 PF17482 Phage tail sheath C-terminal domain JJQ57_RS30010 PF04984 Phage tail sheath protein subtilisin-like domain JJQ57_RS30060 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ57_RS30065 PF00717 Peptidase S24-like JJQ57_RS30065 PF01381 Helix-turn-helix JJQ57_RS30070 PF11112 Pyocin activator protein PrtN JJQ57_RS30075 PF00425 chorismate binding enzyme JJQ57_RS30075 PF04715 Anthranilate synthase component I, N terminal region JJQ57_RS30080 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS30085 PF00834 Ribulose-phosphate 3 epimerase family JJQ57_RS30090 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS30095 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS30105 PF08402 TOBE domain JJQ57_RS30105 PF00005 ABC transporter JJQ57_RS30115 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS30115 PF00072 Response regulator receiver domain JJQ57_RS30120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS30120 PF07730 Histidine kinase JJQ57_RS30130 PF05099 Tellurite resistance protein TerB JJQ57_RS30130 PF00226 DnaJ domain JJQ57_RS30135 PF00483 Nucleotidyl transferase JJQ57_RS30140 PF01636 Phosphotransferase enzyme family JJQ57_RS30145 PF03968 OstA-like protein JJQ57_RS30145 PF04453 LPS transport system D JJQ57_RS30150 PF09312 SurA N-terminal domain JJQ57_RS30150 PF00639 PPIC-type PPIASE domain JJQ57_RS30155 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JJQ57_RS30160 PF00398 Ribosomal RNA adenine dimethylase JJQ57_RS30165 PF04379 ApaG domain JJQ57_RS30170 PF00149 Calcineurin-like phosphoesterase JJQ57_RS30175 PF00581 Rhodanese-like domain JJQ57_RS30180 PF08298 PrkA AAA domain JJQ57_RS30180 PF06798 PrkA serine protein kinase C-terminal domain JJQ57_RS30185 PF04285 Protein of unknown function (DUF444) JJQ57_RS30190 PF04293 SpoVR like protein JJQ57_RS30200 PF01966 HD domain JJQ57_RS30200 PF01743 Poly A polymerase head domain JJQ57_RS30200 PF12627 Probable RNA and SrmB- binding site of polymerase A JJQ57_RS30210 PF02152 Dihydroneopterin aldolase JJQ57_RS30215 PF02660 Glycerol-3-phosphate acyltransferase JJQ57_RS30220 PF00814 Glycoprotease family JJQ57_RS30225 PF01165 Ribosomal protein S21 JJQ57_RS30235 PF13662 Toprim domain JJQ57_RS30235 PF08275 DNA primase catalytic core, N-terminal domain JJQ57_RS30235 PF01807 CHC2 zinc finger JJQ57_RS30235 PF08278 DNA primase DnaG DnaB-binding JJQ57_RS30235 PF10410 DnaB-helicase binding domain of primase JJQ57_RS30240 PF04546 Sigma-70, non-essential region JJQ57_RS30240 PF03979 Sigma-70 factor, region 1.1 JJQ57_RS30240 PF00140 Sigma-70 factor, region 1.2 JJQ57_RS30240 PF04542 Sigma-70 region 2 JJQ57_RS30240 PF04539 Sigma-70 region 3 JJQ57_RS30240 PF04545 Sigma-70, region 4 JJQ57_RS30245 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS30245 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS30245 PF00563 EAL domain JJQ57_RS30260 PF02661 Fic/DOC family JJQ57_RS30275 PF18650 Immunomodulating metalloprotease N-terminal domain JJQ57_RS30275 PF13402 Peptidase M60, enhancin and enhancin-like JJQ57_RS30275 PF18642 Immunomodulating metalloprotease helical domain JJQ57_RS30280 PF09234 Domain of unknown function (DUF1963) JJQ57_RS30300 PF01679 Proteolipid membrane potential modulator JJQ57_RS30310 PF02627 Carboxymuconolactone decarboxylase family JJQ57_RS30315 PF02311 AraC-like ligand binding domain JJQ57_RS30315 PF12833 Helix-turn-helix domain JJQ57_RS30320 PF05656 Protein of unknown function (DUF805) JJQ57_RS30325 PF13419 Haloacid dehalogenase-like hydrolase JJQ57_RS30330 PF01863 Protein of unknown function DUF45 JJQ57_RS30340 PF08241 Methyltransferase domain JJQ57_RS30355 PF01116 Fructose-bisphosphate aldolase class-II JJQ57_RS30370 PF00162 Phosphoglycerate kinase JJQ57_RS30375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JJQ57_RS30375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JJQ57_RS30380 PF01261 Xylose isomerase-like TIM barrel JJQ57_RS30390 PF02780 Transketolase, C-terminal domain JJQ57_RS30390 PF02779 Transketolase, pyrimidine binding domain JJQ57_RS30390 PF00456 Transketolase, thiamine diphosphate binding domain JJQ57_RS30400 PF02772 S-adenosylmethionine synthetase, central domain JJQ57_RS30400 PF02773 S-adenosylmethionine synthetase, C-terminal domain JJQ57_RS30400 PF00438 S-adenosylmethionine synthetase, N-terminal domain JJQ57_RS30440 PF02600 Disulfide bond formation protein DsbB JJQ57_RS30450 PF04536 TPM domain JJQ57_RS30460 PF01266 FAD dependent oxidoreductase JJQ57_RS30465 PF00196 Bacterial regulatory proteins, luxR family JJQ57_RS30475 PF00117 Glutamine amidotransferase class-I JJQ57_RS30480 PF00202 Aminotransferase class-III JJQ57_RS30490 PF03475 3-alpha domain JJQ57_RS30490 PF03473 MOSC domain JJQ57_RS30495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS30495 PF03466 LysR substrate binding domain JJQ57_RS30500 PF00027 Cyclic nucleotide-binding domain JJQ57_RS30500 PF13545 Crp-like helix-turn-helix domain JJQ57_RS30515 PF00115 Cytochrome C and Quinol oxidase polypeptide I JJQ57_RS30520 PF00034 Cytochrome c JJQ57_RS30525 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JJQ57_RS30530 PF00510 Cytochrome c oxidase subunit III JJQ57_RS30535 PF08406 CbbQ/NirQ/NorQ C-terminal JJQ57_RS30535 PF07728 AAA domain (dynein-related subfamily) JJQ57_RS30540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS30545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS30550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS30560 PF17805 AsnC-like ligand binding domain JJQ57_RS30560 PF13404 AsnC-type helix-turn-helix domain JJQ57_RS30565 PF17805 AsnC-like ligand binding domain JJQ57_RS30570 PF17805 AsnC-like ligand binding domain JJQ57_RS30575 PF17805 AsnC-like ligand binding domain JJQ57_RS30580 PF04055 Radical SAM superfamily JJQ57_RS30580 PF06463 Molybdenum Cofactor Synthesis C JJQ57_RS30585 PF10414 Sirohaem synthase dimerisation region JJQ57_RS30585 PF14824 Sirohaem biosynthesis protein central JJQ57_RS30585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JJQ57_RS30595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS30595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS30595 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS30595 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS30600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS30600 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS30600 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS30600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS30605 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS30605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS30605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS30605 PF12806 Acetyl-CoA dehydrogenase C-terminal like JJQ57_RS30620 PF08241 Methyltransferase domain JJQ57_RS30625 PF08241 Methyltransferase domain JJQ57_RS30625 PF12697 Alpha/beta hydrolase family JJQ57_RS30630 PF00155 Aminotransferase class I and II JJQ57_RS30635 PF04055 Radical SAM superfamily JJQ57_RS30635 PF06968 Biotin and Thiamin Synthesis associated domain JJQ57_RS30645 PF02626 Carboxyltransferase domain, subdomain A and B JJQ57_RS30655 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS30655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS30655 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS30660 PF00364 Biotin-requiring enzyme JJQ57_RS30665 PF03746 LamB/YcsF family JJQ57_RS30670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS30670 PF03466 LysR substrate binding domain JJQ57_RS30680 PF00156 Phosphoribosyl transferase domain JJQ57_RS30685 PF10043 Predicted periplasmic lipoprotein (DUF2279) JJQ57_RS30690 PF03459 TOBE domain JJQ57_RS30690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS30695 PF01636 Phosphotransferase enzyme family JJQ57_RS30700 PF00892 EamA-like transporter family JJQ57_RS30715 PF01274 Malate synthase JJQ57_RS30725 PF12146 Serine aminopeptidase, S33 JJQ57_RS30740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS30740 PF03466 LysR substrate binding domain JJQ57_RS30745 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JJQ57_RS30750 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS30755 PF03061 Thioesterase superfamily JJQ57_RS30760 PF13417 Glutathione S-transferase, N-terminal domain JJQ57_RS30760 PF00043 Glutathione S-transferase, C-terminal domain JJQ57_RS30765 PF08281 Sigma-70, region 4 JJQ57_RS30765 PF04542 Sigma-70 region 2 JJQ57_RS30770 PF16220 Domain of unknown function (DUF4880) JJQ57_RS30770 PF04773 FecR protein JJQ57_RS30775 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS30775 PF00593 TonB dependent receptor JJQ57_RS30805 PF06123 Inner membrane protein CreD JJQ57_RS30810 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS30810 PF00672 HAMP domain JJQ57_RS30810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS30815 PF00072 Response regulator receiver domain JJQ57_RS30815 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS30825 PF01553 Acyltransferase JJQ57_RS30835 PF17871 AAA lid domain JJQ57_RS30835 PF10431 C-terminal, D2-small domain, of ClpB protein JJQ57_RS30835 PF02861 Clp amino terminal domain, pathogenicity island component JJQ57_RS30835 PF00004 ATPase family associated with various cellular activities (AAA) JJQ57_RS30835 PF07724 AAA domain (Cdc48 subfamily) JJQ57_RS30840 PF07690 Major Facilitator Superfamily JJQ57_RS30845 PF18030 RimK PreATP-grasp domain JJQ57_RS30845 PF08443 RimK-like ATP-grasp domain JJQ57_RS30850 PF00313 'Cold-shock' DNA-binding domain JJQ57_RS30855 PF00271 Helicase conserved C-terminal domain JJQ57_RS30855 PF00270 DEAD/DEAH box helicase JJQ57_RS30855 PF03880 DbpA RNA binding domain JJQ57_RS30860 PF12805 FUSC-like inner membrane protein yccS JJQ57_RS30870 PF16200 C-terminal region of band_7 JJQ57_RS30870 PF01145 SPFH domain / Band 7 family JJQ57_RS30880 PF01384 Phosphate transporter family JJQ57_RS30890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS30890 PF03466 LysR substrate binding domain JJQ57_RS30895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JJQ57_RS30895 PF02770 Acyl-CoA dehydrogenase, middle domain JJQ57_RS30895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JJQ57_RS30900 PF02515 CoA-transferase family III JJQ57_RS30905 PF01546 Peptidase family M20/M25/M40 JJQ57_RS30905 PF07687 Peptidase dimerisation domain JJQ57_RS30910 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JJQ57_RS30915 PF01979 Amidohydrolase family JJQ57_RS30920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JJQ57_RS30920 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS30925 PF01180 Dihydroorotate dehydrogenase JJQ57_RS30930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JJQ57_RS30935 PF07969 Amidohydrolase family JJQ57_RS30940 PF08362 YcdC-like protein, C-terminal region JJQ57_RS30940 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS30950 PF07660 Secretin and TonB N terminus short domain JJQ57_RS30950 PF00593 TonB dependent receptor JJQ57_RS30950 PF07715 TonB-dependent Receptor Plug Domain JJQ57_RS30960 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JJQ57_RS30960 PF05221 S-adenosyl-L-homocysteine hydrolase JJQ57_RS30965 PF02824 TGS domain JJQ57_RS30965 PF04607 Region found in RelA / SpoT proteins JJQ57_RS30965 PF13291 ACT domain JJQ57_RS30970 PF02219 Methylenetetrahydrofolate reductase JJQ57_RS30980 PF00270 DEAD/DEAH box helicase JJQ57_RS30980 PF00271 Helicase conserved C-terminal domain JJQ57_RS30985 PF02321 Outer membrane efflux protein JJQ57_RS30985 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JJQ57_RS30990 PF00873 AcrB/AcrD/AcrF family JJQ57_RS30995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JJQ57_RS30995 PF00529 HlyD membrane-fusion protein of T1SS JJQ57_RS31015 PF00665 Integrase core domain JJQ57_RS31030 PF02028 BCCT, betaine/carnitine/choline family transporter JJQ57_RS31040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS31040 PF03466 LysR substrate binding domain JJQ57_RS31045 PF01554 MatE JJQ57_RS31050 PF00563 EAL domain JJQ57_RS31050 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS31050 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS31055 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS31055 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS31060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JJQ57_RS31060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JJQ57_RS31060 PF00205 Thiamine pyrophosphate enzyme, central domain JJQ57_RS31065 PF00156 Phosphoribosyl transferase domain JJQ57_RS31070 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JJQ57_RS31070 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JJQ57_RS31075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS31080 PF07883 Cupin domain JJQ57_RS31080 PF01381 Helix-turn-helix JJQ57_RS31085 PF00842 Alanine racemase, C-terminal domain JJQ57_RS31085 PF01168 Alanine racemase, N-terminal domain JJQ57_RS31090 PF01042 Endoribonuclease L-PSP JJQ57_RS31095 PF01266 FAD dependent oxidoreductase JJQ57_RS31105 PF13617 YnbE-like lipoprotein JJQ57_RS31115 PF01037 Lrp/AsnC ligand binding domain JJQ57_RS31120 PF01266 FAD dependent oxidoreductase JJQ57_RS31125 PF13091 PLD-like domain JJQ57_RS31130 PF07690 Major Facilitator Superfamily JJQ57_RS31135 PF00171 Aldehyde dehydrogenase family JJQ57_RS31140 PF00202 Aminotransferase class-III JJQ57_RS31150 PF00471 Ribosomal protein L33 JJQ57_RS31155 PF00830 Ribosomal L28 family JJQ57_RS31160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JJQ57_RS31165 PF04002 RadC-like JAB domain JJQ57_RS31170 PF04127 DNA / pantothenate metabolism flavoprotein JJQ57_RS31170 PF02441 Flavoprotein JJQ57_RS31175 PF00692 dUTPase JJQ57_RS31180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JJQ57_RS31180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JJQ57_RS31180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JJQ57_RS31180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JJQ57_RS31185 PF00696 Amino acid kinase family JJQ57_RS31190 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JJQ57_RS31190 PF12833 Helix-turn-helix domain JJQ57_RS31205 PF04030 D-arabinono-1,4-lactone oxidase JJQ57_RS31205 PF01565 FAD binding domain JJQ57_RS31210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS31225 PF00156 Phosphoribosyl transferase domain JJQ57_RS31230 PF03372 Endonuclease/Exonuclease/phosphatase family JJQ57_RS31240 PF01138 3' exoribonuclease family, domain 1 JJQ57_RS31240 PF03725 3' exoribonuclease family, domain 2 JJQ57_RS31245 PF08340 Domain of unknown function (DUF1732) JJQ57_RS31245 PF03755 YicC-like family, N-terminal region JJQ57_RS31250 PF00625 Guanylate kinase JJQ57_RS31255 PF01192 RNA polymerase Rpb6 JJQ57_RS31260 PF02824 TGS domain JJQ57_RS31260 PF13291 ACT domain JJQ57_RS31260 PF04607 Region found in RelA / SpoT proteins JJQ57_RS31265 PF01042 Endoribonuclease L-PSP JJQ57_RS31280 PF00072 Response regulator receiver domain JJQ57_RS31280 PF12833 Helix-turn-helix domain JJQ57_RS31290 PF03466 LysR substrate binding domain JJQ57_RS31290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS31295 PF00270 DEAD/DEAH box helicase JJQ57_RS31295 PF00271 Helicase conserved C-terminal domain JJQ57_RS31295 PF17191 RecG wedge domain JJQ57_RS31310 PF00216 Bacterial DNA-binding protein JJQ57_RS31315 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS31315 PF18113 Rubredoxin binding C-terminal domain JJQ57_RS31320 PF00301 Rubredoxin JJQ57_RS31325 PF00301 Rubredoxin JJQ57_RS31330 PF03928 Haem-degrading JJQ57_RS31335 PF02754 Cysteine-rich domain JJQ57_RS31335 PF13183 4Fe-4S dicluster domain JJQ57_RS31340 PF01565 FAD binding domain JJQ57_RS31345 PF02913 FAD linked oxidases, C-terminal domain JJQ57_RS31345 PF01565 FAD binding domain JJQ57_RS31350 PF07729 FCD domain JJQ57_RS31350 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS31355 PF04345 Chorismate lyase JJQ57_RS31360 PF01040 UbiA prenyltransferase family JJQ57_RS31370 PF00072 Response regulator receiver domain JJQ57_RS31370 PF00486 Transcriptional regulatory protein, C terminal JJQ57_RS31375 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS31375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS31375 PF11808 Phosphate regulon sensor protein PhoR JJQ57_RS31375 PF00989 PAS fold JJQ57_RS31380 PF01595 Cyclin M transmembrane N-terminal domain JJQ57_RS31380 PF00571 CBS domain JJQ57_RS31380 PF03471 Transporter associated domain JJQ57_RS31385 PF08525 Opacity-associated protein A N-terminal motif JJQ57_RS31385 PF01551 Peptidase family M23 JJQ57_RS31385 PF01476 LysM domain JJQ57_RS31390 PF00072 Response regulator receiver domain JJQ57_RS31395 PF01895 PhoU domain JJQ57_RS31400 PF00005 ABC transporter JJQ57_RS31405 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS31410 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS31415 PF12849 PBP superfamily domain JJQ57_RS31450 PF07690 Major Facilitator Superfamily JJQ57_RS31455 PF03061 Thioesterase superfamily JJQ57_RS31460 PF00732 GMC oxidoreductase JJQ57_RS31460 PF05199 GMC oxidoreductase JJQ57_RS31465 PF00171 Aldehyde dehydrogenase family JJQ57_RS31470 PF00440 Bacterial regulatory proteins, tetR family JJQ57_RS31470 PF13977 BetI-type transcriptional repressor, C-terminal JJQ57_RS31475 PF02028 BCCT, betaine/carnitine/choline family transporter JJQ57_RS31480 PF00571 CBS domain JJQ57_RS31480 PF00005 ABC transporter JJQ57_RS31485 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS31490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS31495 PF03313 Serine dehydratase alpha chain JJQ57_RS31495 PF03315 Serine dehydratase beta chain JJQ57_RS31500 PF12833 Helix-turn-helix domain JJQ57_RS31500 PF01965 DJ-1/PfpI family JJQ57_RS31510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS31510 PF03466 LysR substrate binding domain JJQ57_RS31515 PF03601 Conserved hypothetical protein 698 JJQ57_RS31520 PF07859 alpha/beta hydrolase fold JJQ57_RS31530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JJQ57_RS31530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JJQ57_RS31535 PF05853 beta-keto acid cleavage enzyme JJQ57_RS31540 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JJQ57_RS31545 PF12833 Helix-turn-helix domain JJQ57_RS31545 PF01965 DJ-1/PfpI family JJQ57_RS31550 PF01546 Peptidase family M20/M25/M40 JJQ57_RS31550 PF07687 Peptidase dimerisation domain JJQ57_RS31560 PF01042 Endoribonuclease L-PSP JJQ57_RS31570 PF13091 PLD-like domain JJQ57_RS31580 PF01244 Membrane dipeptidase (Peptidase family M19) JJQ57_RS31590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JJQ57_RS31595 PF13183 4Fe-4S dicluster domain JJQ57_RS31595 PF02754 Cysteine-rich domain JJQ57_RS31600 PF00766 Electron transfer flavoprotein FAD-binding domain JJQ57_RS31600 PF01012 Electron transfer flavoprotein domain JJQ57_RS31615 PF13443 Cro/C1-type HTH DNA-binding domain JJQ57_RS31650 PF00355 Rieske [2Fe-2S] domain JJQ57_RS31650 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JJQ57_RS31655 PF00970 Oxidoreductase FAD-binding domain JJQ57_RS31655 PF00175 Oxidoreductase NAD-binding domain JJQ57_RS31655 PF00042 Globin JJQ57_RS31665 PF01212 Beta-eliminating lyase JJQ57_RS31675 PF00464 Serine hydroxymethyltransferase JJQ57_RS31680 PF01266 FAD dependent oxidoreductase JJQ57_RS31690 PF01571 Aminomethyltransferase folate-binding domain JJQ57_RS31690 PF08669 Glycine cleavage T-protein C-terminal barrel domain JJQ57_RS31690 PF07992 Pyridine nucleotide-disulphide oxidoreductase JJQ57_RS31690 PF17806 Sarcosine oxidase A3 domain JJQ57_RS31700 PF00551 Formyl transferase JJQ57_RS31705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JJQ57_RS31705 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS31710 PF01263 Aldose 1-epimerase JJQ57_RS31725 PF02222 ATP-grasp domain JJQ57_RS31725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JJQ57_RS31730 PF00731 AIR carboxylase JJQ57_RS31735 PF00107 Zinc-binding dehydrogenase JJQ57_RS31735 PF08240 Alcohol dehydrogenase GroES-like domain JJQ57_RS31740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS31740 PF03466 LysR substrate binding domain JJQ57_RS31745 PF10415 Fumarase C C-terminus JJQ57_RS31745 PF00206 Lyase JJQ57_RS31750 PF04143 Sulphur transport JJQ57_RS31755 PF00392 Bacterial regulatory proteins, gntR family JJQ57_RS31755 PF00155 Aminotransferase class I and II JJQ57_RS31770 PF03222 Tryptophan/tyrosine permease family JJQ57_RS31775 PF02436 Conserved carboxylase domain JJQ57_RS31775 PF00682 HMGL-like JJQ57_RS31775 PF00364 Biotin-requiring enzyme JJQ57_RS31780 PF00289 Biotin carboxylase, N-terminal domain JJQ57_RS31780 PF02785 Biotin carboxylase C-terminal domain JJQ57_RS31780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JJQ57_RS31785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JJQ57_RS31785 PF03466 LysR substrate binding domain JJQ57_RS31795 PF01418 Helix-turn-helix domain, rpiR family JJQ57_RS31795 PF01380 SIS domain JJQ57_RS31800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JJQ57_RS31800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JJQ57_RS31805 PF16325 Peptidase family U32 C-terminal domain JJQ57_RS31805 PF01136 Peptidase family U32 JJQ57_RS31820 PF03707 Bacterial signalling protein N terminal repeat JJQ57_RS31820 PF00563 EAL domain JJQ57_RS31820 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS31825 PF13361 UvrD-like helicase C-terminal domain JJQ57_RS31825 PF00580 UvrD/REP helicase N-terminal domain JJQ57_RS31830 PF00892 EamA-like transporter family JJQ57_RS31835 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JJQ57_RS31835 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JJQ57_RS31845 PF13439 Glycosyltransferase Family 4 JJQ57_RS31845 PF00534 Glycosyl transferases group 1 JJQ57_RS31850 PF13579 Glycosyl transferase 4-like domain JJQ57_RS31850 PF00534 Glycosyl transferases group 1 JJQ57_RS31860 PF00005 ABC transporter JJQ57_RS31870 PF00483 Nucleotidyl transferase JJQ57_RS31870 PF01050 Mannose-6-phosphate isomerase JJQ57_RS31875 PF16363 GDP-mannose 4,6 dehydratase JJQ57_RS31880 PF16363 GDP-mannose 4,6 dehydratase JJQ57_RS31905 PF01757 Acyltransferase family JJQ57_RS31945 PF03547 Membrane transport protein JJQ57_RS31955 PF03600 Citrate transporter JJQ57_RS31960 PF03741 Integral membrane protein TerC family JJQ57_RS31965 PF00472 RF-1 domain JJQ57_RS31980 PF02690 Na+/Pi-cotransporter JJQ57_RS31995 PF07690 Major Facilitator Superfamily JJQ57_RS32005 PF07670 Nucleoside recognition JJQ57_RS32010 PF00375 Sodium:dicarboxylate symporter family JJQ57_RS32025 PF00072 Response regulator receiver domain JJQ57_RS32025 PF00158 Sigma-54 interaction domain JJQ57_RS32025 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS32030 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS32030 PF08448 PAS fold JJQ57_RS32030 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JJQ57_RS32030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS32030 PF00672 HAMP domain JJQ57_RS32035 PF01510 N-acetylmuramoyl-L-alanine amidase JJQ57_RS32040 PF01914 MarC family integral membrane protein JJQ57_RS32045 PF00990 Diguanylate cyclase, GGDEF domain JJQ57_RS32055 PF01323 DSBA-like thioredoxin domain JJQ57_RS32060 PF00034 Cytochrome c JJQ57_RS32065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JJQ57_RS32070 PF01926 50S ribosome-binding GTPase JJQ57_RS32075 PF01367 5'-3' exonuclease, C-terminal SAM fold JJQ57_RS32075 PF01612 3'-5' exonuclease JJQ57_RS32075 PF00476 DNA polymerase family A JJQ57_RS32075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JJQ57_RS32085 PF01636 Phosphotransferase enzyme family JJQ57_RS32100 PF01297 Zinc-uptake complex component A periplasmic JJQ57_RS32105 PF01475 Ferric uptake regulator family JJQ57_RS32110 PF00005 ABC transporter JJQ57_RS32115 PF00950 ABC 3 transport family JJQ57_RS32125 PF00005 ABC transporter JJQ57_RS32125 PF09383 NIL domain JJQ57_RS32130 PF00528 Binding-protein-dependent transport system inner membrane component JJQ57_RS32135 PF03180 NLPA lipoprotein JJQ57_RS32160 PF00324 Amino acid permease JJQ57_RS32165 PF02954 Bacterial regulatory protein, Fis family JJQ57_RS32165 PF00072 Response regulator receiver domain JJQ57_RS32165 PF00158 Sigma-54 interaction domain JJQ57_RS32170 PF02743 Cache domain JJQ57_RS32170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JJQ57_RS32170 PF00512 His Kinase A (phospho-acceptor) domain JJQ57_RS32180 PF00905 Penicillin binding protein transpeptidase domain JJQ57_RS32190 PF08543 Phosphomethylpyrimidine kinase JJQ57_RS32200 PF00999 Sodium/hydrogen exchanger family JJQ57_RS32200 PF02254 TrkA-N domain JJQ57_RS32205 PF03061 Thioesterase superfamily JJQ57_RS32220 PF00120 Glutamine synthetase, catalytic domain JJQ57_RS32225 PF00202 Aminotransferase class-III JJQ57_RS32255 PF00999 Sodium/hydrogen exchanger family JJQ57_RS32255 PF02254 TrkA-N domain JJQ57_RS32260 PF00083 Sugar (and other) transporter JJQ57_RS32265 PF03544 Gram-negative bacterial TonB protein C-terminal JJQ57_RS32270 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ57_RS32270 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ57_RS32285 PF02492 CobW/HypB/UreG, nucleotide-binding domain JJQ57_RS32285 PF07683 Cobalamin synthesis protein cobW C-terminal domain JJQ57_RS32290 PF01258 Prokaryotic dksA/traR C4-type zinc finger JJQ57_RS32300 PF01520 N-acetylmuramoyl-L-alanine amidase JJQ57_RS32305 PF02649 Type I GTP cyclohydrolase folE2 JJQ57_RS32315 PF01979 Amidohydrolase family JJQ57_RS32335 PF16868 NMT1-like family JJQ57_RS32350 PF07690 Major Facilitator Superfamily JJQ57_RS32385 PF08722 TnsA endonuclease N terminal JJQ57_RS32385 PF08721 TnsA endonuclease C terminal JJQ57_RS32390 PF01380 SIS domain JJQ57_RS32395 PF00455 DeoR C terminal sensor domain JJQ57_RS32395 PF08220 DeoR-like helix-turn-helix domain JJQ57_RS32405 PF00132 Bacterial transferase hexapeptide (six repeats) JJQ57_RS32405 PF12804 MobA-like NTP transferase domain JJQ57_RS32410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JJQ57_RS32410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JJQ57_RS32415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ57_RS32415 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ57_RS32420 PF00231 ATP synthase JJQ57_RS32425 PF02874 ATP synthase alpha/beta family, beta-barrel domain JJQ57_RS32425 PF00306 ATP synthase alpha/beta chain, C terminal domain JJQ57_RS32425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JJQ57_RS32430 PF00213 ATP synthase delta (OSCP) subunit JJQ57_RS32435 PF00430 ATP synthase B/B' CF(0) JJQ57_RS32440 PF00137 ATP synthase subunit C JJQ57_RS32445 PF00119 ATP synthase A chain JJQ57_RS32450 PF03899 ATP synthase I chain JJQ57_RS32455 PF17762 HTH domain found in ParB protein JJQ57_RS32455 PF02195 ParB-like nuclease domain JJQ57_RS32460 PF13614 AAA domain JJQ57_RS32465 PF02527 rRNA small subunit methyltransferase G JJQ57_RS32470 PF13932 GidA associated domain JJQ57_RS32470 PF01134 Glucose inhibited division protein A JJQ57_RS32480 PF12631 MnmE helical domain JJQ57_RS32480 PF01926 50S ribosome-binding GTPase JJQ57_RS32480 PF10396 GTP-binding protein TrmE N-terminus JJQ57_RS32485 PF02096 60Kd inner membrane protein JJQ57_RS32485 PF14849 YidC periplasmic domain JJQ57_RS32490 PF00825 Ribonuclease P JJQ57_RS32495 PF00468 Ribosomal protein L34