locus-tag	class	description
JJQ57_RS00035	COG2010	Cytochrome c
JJQ57_RS00050	COG2818	Glycosylase
JJQ57_RS00065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JJQ57_RS00080	COG0569	domain protein
JJQ57_RS00100	COG1652	LysM domain
JJQ57_RS00105	COG0758	DNA mediated transformation
JJQ57_RS00135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS00155	COG3119	arylsulfatase activity
JJQ57_RS00160	COG0583	DNA-binding transcription factor activity
JJQ57_RS00195	COG3360	Dodecin
JJQ57_RS00210	COG3210	domain, Protein
JJQ57_RS00210	COG3210	domain, Protein
JJQ57_RS00245	COG3174	membrane
JJQ57_RS00290	COG0367	asparagine synthase
JJQ57_RS00310	COG0583	DNA-binding transcription factor activity
JJQ57_RS00325	COG1764	response to oxidative stress
JJQ57_RS00360	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JJQ57_RS00365	COG0339	signal peptide processing
JJQ57_RS00370	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
JJQ57_RS00385	COG1262	PFAM Formylglycine-generating sulfatase enzyme
JJQ57_RS00400	COG0515	serine threonine protein kinase
JJQ57_RS00400	COG2815	serine threonine protein kinase
JJQ57_RS00405	COG0631	protein serine/threonine phosphatase activity
JJQ57_RS00420	COG1360	Flagellar Motor Protein
JJQ57_RS00550	COG0659	secondary active sulfate transmembrane transporter activity
JJQ57_RS00560	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JJQ57_RS00565	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JJQ57_RS00570	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
JJQ57_RS00610	COG2153	protein acetylation
JJQ57_RS00650	COG0583	DNA-binding transcription factor activity
JJQ57_RS00675	COG2824	Alkylphosphonate utilization operon protein PhnA
JJQ57_RS00705	COG0402	S-adenosylhomocysteine deaminase activity
JJQ57_RS00710	COG3845	ABC transporter
JJQ57_RS00715	COG4603	Belongs to the binding-protein-dependent transport system permease family
JJQ57_RS00720	COG1079	Belongs to the binding-protein-dependent transport system permease family
JJQ57_RS00795	COG0583	DNA-binding transcription factor activity
JJQ57_RS00800	COG3485	protocatechuate 3,4-dioxygenase
JJQ57_RS00805	COG3485	protocatechuate 3,4-dioxygenase
JJQ57_RS00810	COG1414	Transcriptional regulator
JJQ57_RS00825	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS00830	COG0583	DNA-binding transcription factor activity
JJQ57_RS00865	COG2233	PERMEase
JJQ57_RS00870	COG1309	transcriptional regulator
JJQ57_RS00905	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
JJQ57_RS00920	COG0835	chemotaxis
JJQ57_RS00925	COG2198	Histidine kinase
JJQ57_RS00925	COG0643	Histidine kinase
JJQ57_RS00930	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS00940	COG0583	DNA-binding transcription factor activity
JJQ57_RS00945	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS00955	COG1116	anion transmembrane transporter activity
JJQ57_RS00960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS00965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS01005	COG2175	clavaminate synthase activity
JJQ57_RS01080	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JJQ57_RS01105	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS01110	COG1113	amino acid transport
JJQ57_RS01125	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JJQ57_RS01130	COG0235	Class ii aldolase
JJQ57_RS01135	COG1396	sequence-specific DNA binding
JJQ57_RS01140	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JJQ57_RS01145	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JJQ57_RS01155	COG0477	Major facilitator Superfamily
JJQ57_RS01165	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JJQ57_RS01170	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JJQ57_RS01175	COG0583	DNA-binding transcription factor activity
JJQ57_RS01195	COG0673	inositol 2-dehydrogenase activity
JJQ57_RS01215	COG2271	Major facilitator Superfamily
JJQ57_RS01225	COG1309	transcriptional regulator
JJQ57_RS01230	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JJQ57_RS01240	COG0477	Major facilitator Superfamily
JJQ57_RS01260	COG2239	Acts as a magnesium transporter
JJQ57_RS01350	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS01360	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JJQ57_RS01375	COG0583	DNA-binding transcription factor activity
JJQ57_RS01380	COG2807	transmembrane transport
JJQ57_RS01400	COG0501	Belongs to the peptidase M48B family
JJQ57_RS01420	COG4208	sulfate ABC transporter
JJQ57_RS01430	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JJQ57_RS01465	COG2199	diguanylate cyclase activity
JJQ57_RS01490	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JJQ57_RS01495	COG0174	glutamine synthetase
JJQ57_RS01500	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
JJQ57_RS01505	COG0174	glutamine synthetase
JJQ57_RS01525	COG3842	ATPase activity
JJQ57_RS01530	COG1176	ABC-type spermidine putrescine transport system, permease component I
JJQ57_RS01535	COG1177	transmembrane transport
JJQ57_RS01585	COG0765	amino acid transport
JJQ57_RS01600	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JJQ57_RS01605	COG0277	FAD linked oxidase domain protein
JJQ57_RS01610	COG0179	Fumarylacetoacetate (FAA) hydrolase
JJQ57_RS01620	COG3111	PFAM Bacterial OB fold (BOF) protein
JJQ57_RS01630	COG0531	amino acid
JJQ57_RS01635	COG2182	Extracellular solute-binding protein
JJQ57_RS01640	COG1177	transmembrane transport
JJQ57_RS01650	COG3842	ATPase activity
JJQ57_RS01655	COG3204	pilus organization
JJQ57_RS01660	COG2234	aminopeptidase activity
JJQ57_RS01680	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JJQ57_RS01690	COG0702	epimerase
JJQ57_RS01730	COG0730	response to heat
JJQ57_RS01765	COG0584	glycerophosphoryl diester phosphodiesterase
JJQ57_RS01785	COG0622	Phosphoesterase
JJQ57_RS01790	COG2233	PERMEase
JJQ57_RS01805	COG0693	protein deglycase activity
JJQ57_RS01845	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JJQ57_RS01855	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
JJQ57_RS01880	COG0429	hydrolase of the alpha beta-hydrolase fold
JJQ57_RS01890	COG0742	ribosomal rna small subunit methyltransferase
JJQ57_RS01895	COG0612	Peptidase, M16
JJQ57_RS01900	COG0612	Peptidase, M16
JJQ57_RS01905	COG0552	protein localization to endoplasmic reticulum
JJQ57_RS01910	COG2884	Cell division ATP-binding protein ftsE
JJQ57_RS01915	COG2177	Part of the ABC transporter FtsEX involved in
JJQ57_RS01935	COG2363	Small membrane protein
JJQ57_RS01970	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JJQ57_RS01985	COG2813	Specifically methylates the guanine in position
JJQ57_RS01985	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JJQ57_RS01995	COG1160	GTP binding
JJQ57_RS02000	COG1872	DUF167
JJQ57_RS02045	COG0626	cystathionine gamma-synthase activity
JJQ57_RS02110	COG2198	Histidine kinase
JJQ57_RS02110	COG0643	Histidine kinase
JJQ57_RS02110	COG0784	Response regulator, receiver
JJQ57_RS02140	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JJQ57_RS02155	COG3038	cytochrome b561
JJQ57_RS02200	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JJQ57_RS02210	COG2169	Transcriptional regulator
JJQ57_RS02210	COG1917	Cupin 2, conserved barrel domain protein
JJQ57_RS02265	COG3214	Protein conserved in bacteria
JJQ57_RS02285	COG5006	permease, DMT superfamily
JJQ57_RS02295	COG2203	Gaf domain
JJQ57_RS02295	COG2199	diguanylate cyclase activity
JJQ57_RS02330	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JJQ57_RS02355	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JJQ57_RS02385	COG0347	Belongs to the P(II) protein family
JJQ57_RS02390	COG0004	ammonium transporteR
JJQ57_RS02395	COG0432	Pfam Uncharacterised protein family UPF0047
JJQ57_RS02460	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JJQ57_RS02490	COG0598	Magnesium transport protein CorA
JJQ57_RS02525	COG3275	phosphorelay sensor kinase activity
JJQ57_RS02580	COG0488	(ABC) transporter
JJQ57_RS02590	COG0861	Integral membrane protein TerC family
JJQ57_RS02595	COG1280	lysine exporter protein (LysE YggA)
JJQ57_RS02600	COG0672	)-iron permease
JJQ57_RS02610	COG2050	protein possibly involved in aromatic compounds catabolism
JJQ57_RS02615	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
JJQ57_RS02620	COG0586	Pfam SNARE associated Golgi protein
JJQ57_RS02635	COG0248	Ppx GppA phosphatase
JJQ57_RS02650	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JJQ57_RS02650	COG2755	lipolytic protein G-D-S-L family
JJQ57_RS02665	COG2271	Major facilitator Superfamily
JJQ57_RS02680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS02685	COG0842	Transport permease protein
JJQ57_RS02685	COG1129	ABC transporter
JJQ57_RS02690	COG0842	Transport permease protein
JJQ57_RS02700	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JJQ57_RS02725	COG0006	proline dipeptidase activity
JJQ57_RS02730	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JJQ57_RS02740	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
JJQ57_RS02755	COG0583	DNA-binding transcription factor activity
JJQ57_RS02765	COG1178	ABC-type Fe3 transport system permease component
JJQ57_RS02795	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JJQ57_RS02800	COG3025	triphosphatase activity
JJQ57_RS02805	COG1392	Phosphate transport regulator
JJQ57_RS02810	COG0306	phosphate transporter
JJQ57_RS02840	COG2183	response to ionizing radiation
JJQ57_RS02865	COG0189	ligase activity
JJQ57_RS02865	COG4067	protein conserved in archaea
JJQ57_RS02870	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JJQ57_RS02900	COG0778	Nitroreductase
JJQ57_RS02910	COG1250	3-hydroxyacyl-CoA dehydrogenase
JJQ57_RS02910	COG1024	Enoyl-CoA hydratase
JJQ57_RS02915	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS02920	COG1454	alcohol dehydrogenase
JJQ57_RS02925	COG0824	Thioesterase
JJQ57_RS02935	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JJQ57_RS02955	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JJQ57_RS02965	COG1652	LysM domain
JJQ57_RS02970	COG1011	Hydrolase
JJQ57_RS02975	COG0494	nUDIX hydrolase
JJQ57_RS02980	COG1218	3'(2'),5'-bisphosphate nucleotidase
JJQ57_RS03055	COG1091	dTDP-4-dehydrorhamnose reductase activity
JJQ57_RS03060	COG1088	dTDP-glucose 4,6-dehydratase activity
JJQ57_RS03065	COG0582	viral genome integration into host DNA
JJQ57_RS03130	COG2814	Major facilitator Superfamily
JJQ57_RS03135	COG1566	PFAM secretion protein HlyD family protein
JJQ57_RS03145	COG1846	Transcriptional regulator
JJQ57_RS03180	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS03280	COG0582	viral genome integration into host DNA
JJQ57_RS03285	COG0582	viral genome integration into host DNA
JJQ57_RS03295	COG0673	inositol 2-dehydrogenase activity
JJQ57_RS03305	COG1194	a g-specific adenine glycosylase
JJQ57_RS03315	COG0579	oxidoreductase
JJQ57_RS03375	COG2861	carbohydrate metabolic process
JJQ57_RS03380	COG0793	Belongs to the peptidase S41A family
JJQ57_RS03385	COG4942	peptidase
JJQ57_RS03415	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JJQ57_RS03430	COG3852	Histidine kinase
JJQ57_RS03445	COG0668	transmembrane transport
JJQ57_RS03465	COG1217	gtp-binding protein TYPA
JJQ57_RS03470	COG0789	Transcriptional regulator
JJQ57_RS03520	COG0402	S-adenosylhomocysteine deaminase activity
JJQ57_RS03555	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JJQ57_RS03575	COG4176	ABC-type proline glycine betaine transport system permease component
JJQ57_RS03580	COG4175	Glycine betaine
JJQ57_RS03585	COG2986	histidine ammonia-lyase
JJQ57_RS03605	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JJQ57_RS03635	COG0251	oxidation-reduction process
JJQ57_RS03640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS03645	COG1051	belongs to the nudix hydrolase family
JJQ57_RS03675	COG0765	amino acid transport
JJQ57_RS03680	COG1126	abc transporter atp-binding protein
JJQ57_RS03690	COG0840	transmembrane signaling receptor activity
JJQ57_RS03800	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JJQ57_RS03820	COG0281	malic enzyme
JJQ57_RS03870	COG0070	glutamate synthase
JJQ57_RS03870	COG0067	glutamate synthase
JJQ57_RS03870	COG0069	glutamate synthase activity
JJQ57_RS03875	COG0493	'glutamate synthase
JJQ57_RS03900	COG2814	Major facilitator Superfamily
JJQ57_RS03905	COG0583	DNA-binding transcription factor activity
JJQ57_RS03910	COG1192	Involved in chromosome partitioning
JJQ57_RS03925	COG2873	o-acetylhomoserine
JJQ57_RS03930	COG0730	response to heat
JJQ57_RS03940	COG1196	nuclear chromosome segregation
JJQ57_RS03940	COG3264	Mechanosensitive ion channel
JJQ57_RS03950	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS03955	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JJQ57_RS03990	COG0859	PFAM glycosyl transferase family 9
JJQ57_RS03995	COG0859	PFAM glycosyl transferase family 9
JJQ57_RS04000	COG0438	transferase activity, transferring glycosyl groups
JJQ57_RS04025	COG2192	nodulation
JJQ57_RS04030	COG0438	transferase activity, transferring glycosyl groups
JJQ57_RS04050	COG1215	transferase activity, transferring glycosyl groups
JJQ57_RS04085	COG2801	Transposase and inactivated derivatives
JJQ57_RS04085	COG3415	Transposase
JJQ57_RS04090	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS04095	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS04105	COG0667	Aldo Keto reductase
JJQ57_RS04120	COG0583	DNA-binding transcription factor activity
JJQ57_RS04125	COG1519	Transferase
JJQ57_RS04135	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS04135	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS04165	COG0833	amino acid
JJQ57_RS04170	COG1024	Enoyl-CoA hydratase
JJQ57_RS04175	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS04195	COG2249	NAD(P)H dehydrogenase (quinone) activity
JJQ57_RS04200	COG1538	Outer membrane efflux protein
JJQ57_RS04215	COG0494	nUDIX hydrolase
JJQ57_RS04225	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JJQ57_RS04230	COG3150	esterase
JJQ57_RS04245	COG3577	Aspartyl protease
JJQ57_RS04260	COG1988	membrane-bound metal-dependent
JJQ57_RS04270	COG0560	Phosphoserine phosphatase
JJQ57_RS04270	COG3830	Belongs to the UPF0237 family
JJQ57_RS04275	COG5001	Diguanylate cyclase
JJQ57_RS04275	COG3300	MHYT domain
JJQ57_RS04325	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JJQ57_RS04325	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JJQ57_RS04330	COG0802	atpase or kinase
JJQ57_RS04335	COG0860	N-Acetylmuramoyl-L-alanine amidase
JJQ57_RS04355	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JJQ57_RS04360	COG0330	HflC and HflK could
JJQ57_RS04365	COG0330	HflC and HflK could
JJQ57_RS04395	COG0557	exoribonuclease II activity
JJQ57_RS04425	COG0305	Participates in initiation and elongation during chromosome replication
JJQ57_RS04450	COG5001	Diguanylate cyclase
JJQ57_RS04450	COG3300	MHYT domain
JJQ57_RS04470	COG0668	transmembrane transport
JJQ57_RS04510	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JJQ57_RS04525	COG0583	DNA-binding transcription factor activity
JJQ57_RS04555	COG2423	ornithine cyclodeaminase activity
JJQ57_RS04560	COG4221	oxidoreductase activity
JJQ57_RS04585	COG0583	DNA-binding transcription factor activity
JJQ57_RS04595	COG2814	Major facilitator Superfamily
JJQ57_RS04615	COG1595	DNA-templated transcription, initiation
JJQ57_RS04620	COG3712	iron ion homeostasis
JJQ57_RS04690	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
JJQ57_RS04695	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JJQ57_RS04705	COG2193	ferroxidase activity
JJQ57_RS04710	COG2982	Protein involved in outer membrane biogenesis
JJQ57_RS04715	COG0789	Transcriptional regulator
JJQ57_RS04740	COG0443	Heat shock 70 kDa protein
JJQ57_RS04760	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JJQ57_RS04805	COG0411	ABC transporter
JJQ57_RS04820	COG0683	leucine binding
JJQ57_RS04825	COG2095	MarC family integral membrane protein
JJQ57_RS04910	COG0023	Translation Initiation Factor
JJQ57_RS04945	COG1272	protein, Hemolysin III
JJQ57_RS04950	COG4221	oxidoreductase activity
JJQ57_RS04975	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JJQ57_RS05000	COG1283	sodium-dependent phosphate transmembrane transporter activity
JJQ57_RS05010	COG0534	Mate efflux family protein
JJQ57_RS05020	COG0463	Glycosyl transferase, family 2
JJQ57_RS05045	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS05045	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS05050	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
JJQ57_RS05060	COG0437	4 iron, 4 sulfur cluster binding
JJQ57_RS05065	COG2864	formate dehydrogenase
JJQ57_RS05080	COG3276	selenocysteine insertion sequence binding
JJQ57_RS05095	COG0531	amino acid
JJQ57_RS05135	COG0509	glycine decarboxylation via glycine cleavage system
JJQ57_RS05165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JJQ57_RS05185	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS05195	COG1522	sequence-specific DNA binding
JJQ57_RS05200	COG0697	spore germination
JJQ57_RS05220	COG0697	spore germination
JJQ57_RS05270	COG1620	l-lactate permease
JJQ57_RS05275	COG2186	Transcriptional regulator
JJQ57_RS05305	COG0497	DNA recombination
JJQ57_RS05370	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JJQ57_RS05405	COG0195	Participates in both transcription termination and antitermination
JJQ57_RS05505	COG4191	Histidine kinase
JJQ57_RS05520	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JJQ57_RS05525	COG0436	Aminotransferase
JJQ57_RS05540	COG2252	PERMEase
JJQ57_RS05560	COG0436	Aminotransferase
JJQ57_RS05585	COG4771	TonB-dependent receptor
JJQ57_RS05590	COG3720	iron ion transport
JJQ57_RS05595	COG4558	Periplasmic binding protein
JJQ57_RS05600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JJQ57_RS05635	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JJQ57_RS05645	COG3098	single-species biofilm formation
JJQ57_RS05660	COG0028	Belongs to the TPP enzyme family
JJQ57_RS05675	COG1183	phosphatidylcholine synthase activity
JJQ57_RS05715	COG2995	paraquat-inducible protein a
JJQ57_RS05720	COG2995	paraquat-inducible protein a
JJQ57_RS05725	COG3008	intermembrane lipid transfer
JJQ57_RS05730	COG1178	ABC-type Fe3 transport system permease component
JJQ57_RS05735	COG1840	ABC-type Fe3 transport system, periplasmic component
JJQ57_RS05780	COG0456	acetyltransferase
JJQ57_RS05790	COG0288	reversible hydration of carbon dioxide
JJQ57_RS05800	COG3549	Plasmid maintenance system killer
JJQ57_RS05850	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JJQ57_RS05855	COG1111	helicase
JJQ57_RS05855	COG1205	dead DEAH box helicase
JJQ57_RS05865	COG0582	viral genome integration into host DNA
JJQ57_RS05870	COG0012	GTP binding
JJQ57_RS05925	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JJQ57_RS05945	COG0789	Transcriptional regulator
JJQ57_RS05955	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
JJQ57_RS05960	COG1090	epimerase
JJQ57_RS06015	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JJQ57_RS06075	COG1285	pathogenesis
JJQ57_RS06080	COG2135	peptidase activity
JJQ57_RS06085	COG0840	transmembrane signaling receptor activity
JJQ57_RS06090	COG0501	Belongs to the peptidase M48B family
JJQ57_RS06105	COG2119	membrane
JJQ57_RS06110	COG0833	amino acid
JJQ57_RS06120	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JJQ57_RS06155	COG2010	Cytochrome c
JJQ57_RS06160	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JJQ57_RS06160	COG3608	succinylglutamate desuccinylase aspartoacylase
JJQ57_RS06230	COG1966	Carbon starvation protein
JJQ57_RS06235	COG2879	small protein
JJQ57_RS06240	COG0523	cobalamin synthesis protein
JJQ57_RS06265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS06270	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS06290	COG0488	(ABC) transporter
JJQ57_RS06295	COG1136	(ABC) transporter
JJQ57_RS06295	COG0577	efflux transmembrane transporter activity
JJQ57_RS06300	COG0577	efflux transmembrane transporter activity
JJQ57_RS06300	COG1136	(ABC) transporter
JJQ57_RS06325	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JJQ57_RS06345	COG3541	Predicted nucleotidyltransferase
JJQ57_RS06350	COG1690	Belongs to the RtcB family
JJQ57_RS06365	COG4650	regulator
JJQ57_RS06390	COG1067	ATP-dependent peptidase activity
JJQ57_RS06410	COG0545	Peptidyl-prolyl cis-trans isomerase
JJQ57_RS06425	COG0142	geranyltranstransferase activity
JJQ57_RS06450	COG3045	CreA protein
JJQ57_RS06465	COG0196	riboflavin kinase activity
JJQ57_RS06480	COG1047	Peptidyl-prolyl cis-trans
JJQ57_RS06520	COG4969	Belongs to the N-Me-Phe pilin family
JJQ57_RS06585	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JJQ57_RS06595	COG3328	transposase activity
JJQ57_RS06610	COG3668	Plasmid stabilization system
JJQ57_RS06615	COG3609	addiction module antidote protein, CC2985 family
JJQ57_RS06725	COG1074	ATP-dependent DNA helicase activity
JJQ57_RS06875	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JJQ57_RS06900	COG3657	addiction module killer protein
JJQ57_RS06905	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JJQ57_RS06915	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JJQ57_RS06930	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JJQ57_RS07070	COG1192	Involved in chromosome partitioning
JJQ57_RS07080	COG2831	hemolysin activation secretion protein
JJQ57_RS07085	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JJQ57_RS07090	COG1252	NADH dehydrogenase
JJQ57_RS07175	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JJQ57_RS07195	COG0477	Major facilitator Superfamily
JJQ57_RS07230	COG3706	GGDEF domain
JJQ57_RS07230	COG4251	negative regulation of phosphorylation
JJQ57_RS07230	COG2203	Gaf domain
JJQ57_RS07230	COG5001	Diguanylate cyclase
JJQ57_RS07265	COG1073	alpha beta
JJQ57_RS07265	COG3064	Membrane
JJQ57_RS07265	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
JJQ57_RS07280	COG2885	chlorophyll binding
JJQ57_RS07295	COG0789	Transcriptional regulator
JJQ57_RS07315	COG1214	PFAM Peptidase M22, glycoprotease
JJQ57_RS07325	COG1801	Protein of unknown function DUF72
JJQ57_RS07330	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JJQ57_RS07355	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS07400	COG2166	iron-sulfur cluster assembly
JJQ57_RS07415	COG1280	lysine exporter protein (LysE YggA)
JJQ57_RS07420	COG1393	Belongs to the ArsC family
JJQ57_RS07440	COG0025	NhaP-type Na H and K H
JJQ57_RS07445	COG0436	Aminotransferase
JJQ57_RS07455	COG0024	Methionine aminopeptidase
JJQ57_RS07535	COG1115	amino acid carrier protein
JJQ57_RS07585	COG2391	methyltransferase activity
JJQ57_RS07590	COG0583	DNA-binding transcription factor activity
JJQ57_RS07595	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
JJQ57_RS07600	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JJQ57_RS07650	COG1546	Belongs to the CinA family
JJQ57_RS07670	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JJQ57_RS07675	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
JJQ57_RS07680	COG3530	Putative quorum-sensing-regulated virulence factor
JJQ57_RS07695	COG1177	transmembrane transport
JJQ57_RS07700	COG1176	ABC-type spermidine putrescine transport system, permease component I
JJQ57_RS07710	COG3148	PFAM DTW domain containing protein
JJQ57_RS07730	COG0069	glutamate synthase activity
JJQ57_RS07755	COG0531	amino acid
JJQ57_RS07760	COG2169	Transcriptional regulator
JJQ57_RS07760	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JJQ57_RS07765	COG0477	Major facilitator Superfamily
JJQ57_RS07770	COG0583	DNA-binding transcription factor activity
JJQ57_RS07775	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS07780	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JJQ57_RS07785	COG1024	Enoyl-CoA hydratase
JJQ57_RS07790	COG1250	3-hydroxyacyl-CoA dehydrogenase
JJQ57_RS07795	COG0183	Belongs to the thiolase family
JJQ57_RS07805	COG0583	DNA-binding transcription factor activity
JJQ57_RS07840	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JJQ57_RS07875	COG2814	Major facilitator Superfamily
JJQ57_RS07915	COG0583	DNA-binding transcription factor activity
JJQ57_RS07925	COG0084	hydrolase, TatD family'
JJQ57_RS07930	COG1609	Transcriptional regulator
JJQ57_RS07940	COG1105	Belongs to the carbohydrate kinase PfkB family
JJQ57_RS07945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JJQ57_RS07945	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
JJQ57_RS07945	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JJQ57_RS08055	COG3842	ATPase activity
JJQ57_RS08075	COG0243	molybdopterin cofactor binding
JJQ57_RS08080	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JJQ57_RS08085	COG2223	nitrite transmembrane transporter activity
JJQ57_RS08100	COG0450	alkyl hydroperoxide reductase
JJQ57_RS08130	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS08170	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JJQ57_RS08175	COG2264	protein methyltransferase activity
JJQ57_RS08185	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JJQ57_RS08255	COG0489	protein tyrosine kinase activity
JJQ57_RS08305	COG0019	diaminopimelate decarboxylase activity
JJQ57_RS08315	COG2194	sulfuric ester hydrolase activity
JJQ57_RS08330	COG4774	siderophore transport
JJQ57_RS08435	COG4397	Mu-like prophage major head subunit gpT
JJQ57_RS08445	COG5005	Phage virion morphogenesis
JJQ57_RS08450	COG2369	cell adhesion
JJQ57_RS08455	COG4383	Mu-like prophage protein gp29
JJQ57_RS08555	COG4396	Host-nuclease inhibitor protein Gam
JJQ57_RS08620	COG1984	allophanate hydrolase subunit 2
JJQ57_RS08635	COG4608	Belongs to the ABC transporter superfamily
JJQ57_RS08640	COG0444	Belongs to the ABC transporter superfamily
JJQ57_RS08645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JJQ57_RS08650	COG0601	transmembrane transport
JJQ57_RS08655	COG0747	negative chemotaxis
JJQ57_RS08665	COG0747	negative chemotaxis
JJQ57_RS08680	COG0747	negative chemotaxis
JJQ57_RS08685	COG0747	negative chemotaxis
JJQ57_RS08700	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
JJQ57_RS08705	COG4676	Protein conserved in bacteria
JJQ57_RS08710	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
JJQ57_RS08725	COG5445	Predicted secreted protein (DUF2300)
JJQ57_RS08730	COG4676	Protein conserved in bacteria
JJQ57_RS08735	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JJQ57_RS08740	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JJQ57_RS08760	COG1077	Cell shape determining protein MreB Mrl
JJQ57_RS08765	COG1792	Involved in formation and maintenance of cell shape
JJQ57_RS08780	COG1530	ribonuclease E activity
JJQ57_RS08790	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JJQ57_RS08795	COG0312	modulator of DNA gyrase
JJQ57_RS08805	COG0312	modulator of DNA gyrase
JJQ57_RS08860	COG1137	ATPase activity
JJQ57_RS08875	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JJQ57_RS08885	COG1127	ABC transporter
JJQ57_RS08890	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JJQ57_RS08895	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JJQ57_RS08935	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JJQ57_RS08945	COG2951	lytic endotransglycosylase activity
JJQ57_RS08965	COG2945	thiolester hydrolase activity
JJQ57_RS08975	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JJQ57_RS08990	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS08995	COG0667	Aldo Keto reductase
JJQ57_RS09010	COG0723	plastoquinol--plastocyanin reductase activity
JJQ57_RS09015	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JJQ57_RS09020	COG2857	Cytochrome c1
JJQ57_RS09025	COG0625	glutathione transferase activity
JJQ57_RS09030	COG2969	positive regulation of protein catabolic process
JJQ57_RS09035	COG2823	Periplasmic or secreted lipoprotein
JJQ57_RS09050	COG3107	peptidoglycan biosynthetic process
JJQ57_RS09090	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JJQ57_RS09105	COG0772	Belongs to the SEDS family
JJQ57_RS09150	COG0739	heme binding
JJQ57_RS09150	COG0741	lytic transglycosylase activity
JJQ57_RS09150	COG1196	nuclear chromosome segregation
JJQ57_RS09170	COG0494	nUDIX hydrolase
JJQ57_RS09175	COG2096	Adenosyltransferase
JJQ57_RS09190	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS09200	COG0668	transmembrane transport
JJQ57_RS09225	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS09235	COG3030	protein affecting phage T7 exclusion by the F plasmid
JJQ57_RS09270	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS09275	COG2205	protein histidine kinase activity
JJQ57_RS09285	COG3642	lipopolysaccharide core region biosynthetic process
JJQ57_RS09300	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS09305	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS09330	COG1704	LemA family
JJQ57_RS09370	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JJQ57_RS09385	COG1918	ferrous iron import across plasma membrane
JJQ57_RS09400	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS09405	COG2814	Major facilitator Superfamily
JJQ57_RS09420	COG0589	response to stress
JJQ57_RS09440	COG0426	domain, Protein
JJQ57_RS09440	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JJQ57_RS09445	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JJQ57_RS09460	COG1473	amidohydrolase
JJQ57_RS09470	COG0154	amidase activity
JJQ57_RS09485	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JJQ57_RS09500	COG0693	protein deglycase activity
JJQ57_RS09520	COG3706	GGDEF domain
JJQ57_RS09530	COG1024	Enoyl-CoA hydratase
JJQ57_RS09540	COG0589	response to stress
JJQ57_RS09570	COG0714	Associated with various cellular activities
JJQ57_RS09600	COG2925	Exonuclease
JJQ57_RS09645	COG0433	COG0433 Predicted ATPase
JJQ57_RS09665	COG4964	Belongs to the GSP D family
JJQ57_RS09725	COG0306	phosphate transporter
JJQ57_RS09735	COG0840	transmembrane signaling receptor activity
JJQ57_RS09750	COG0697	spore germination
JJQ57_RS09755	COG0095	Lipoate-protein ligase
JJQ57_RS09760	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JJQ57_RS09765	COG1074	ATP-dependent DNA helicase activity
JJQ57_RS09770	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JJQ57_RS09780	COG0420	3'-5' exonuclease activity
JJQ57_RS09920	COG2831	hemolysin activation secretion protein
JJQ57_RS09955	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS09965	COG0583	DNA-binding transcription factor activity
JJQ57_RS09985	COG0154	amidase activity
JJQ57_RS09995	COG0463	Glycosyl transferase, family 2
JJQ57_RS10010	COG0583	DNA-binding transcription factor activity
JJQ57_RS10290	COG4695	Portal protein
JJQ57_RS10365	COG2015	COG2015, Alkyl sulfatase and related hydrolases
JJQ57_RS10390	COG1024	Enoyl-CoA hydratase
JJQ57_RS10395	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS10410	COG2720	vancomycin resistance protein
JJQ57_RS10420	COG3180	Ammonia monooxygenase
JJQ57_RS10500	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JJQ57_RS10565	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JJQ57_RS10575	COG4206	TonB-dependent receptor
JJQ57_RS10585	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JJQ57_RS10590	COG0583	DNA-binding transcription factor activity
JJQ57_RS10620	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JJQ57_RS10625	COG1113	amino acid transport
JJQ57_RS10640	COG2079	MmgE PrpD family protein
JJQ57_RS10655	COG0372	Belongs to the citrate synthase family
JJQ57_RS10665	COG1802	Transcriptional regulator
JJQ57_RS10675	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JJQ57_RS10700	COG0656	L-ascorbic acid biosynthetic process
JJQ57_RS10715	COG3023	N-Acetylmuramoyl-L-alanine amidase
JJQ57_RS10730	COG0546	phosphoglycolate phosphatase activity
JJQ57_RS10745	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JJQ57_RS10780	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
JJQ57_RS10815	COG0582	viral genome integration into host DNA
JJQ57_RS10845	COG3646	Phage regulatory protein
JJQ57_RS10945	COG3646	Phage regulatory protein
JJQ57_RS10955	COG3179	chitinase
JJQ57_RS10975	COG1802	Transcriptional regulator
JJQ57_RS10975	COG4626	Terminase
JJQ57_RS10980	COG4695	Portal protein
JJQ57_RS11120	COG2267	carboxylic ester hydrolase activity
JJQ57_RS11135	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JJQ57_RS11140	COG2885	chlorophyll binding
JJQ57_RS11145	COG0204	Acyl-transferase
JJQ57_RS11170	COG0386	Belongs to the glutathione peroxidase family
JJQ57_RS11175	COG1309	transcriptional regulator
JJQ57_RS11185	COG1307	EDD domain protein, DegV family
JJQ57_RS11220	COG0450	alkyl hydroperoxide reductase
JJQ57_RS11225	COG0492	ferredoxin-NADP+ reductase activity
JJQ57_RS11265	COG0271	Belongs to the BolA IbaG family
JJQ57_RS11285	COG5001	Diguanylate cyclase
JJQ57_RS11285	COG5002	protein histidine kinase activity
JJQ57_RS11295	COG0604	alcohol dehydrogenase
JJQ57_RS11295	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS11295	COG3321	synthase
JJQ57_RS11315	COG1113	amino acid transport
JJQ57_RS11365	COG0583	DNA-binding transcription factor activity
JJQ57_RS11370	COG0583	DNA-binding transcription factor activity
JJQ57_RS11375	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
JJQ57_RS11380	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS11390	COG2079	MmgE PrpD family protein
JJQ57_RS11400	COG2301	Belongs to the HpcH HpaI aldolase family
JJQ57_RS11495	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
JJQ57_RS11565	COG2239	Acts as a magnesium transporter
JJQ57_RS11575	COG4807	Protein conserved in bacteria
JJQ57_RS11590	COG3038	cytochrome b561
JJQ57_RS11675	COG3122	Protein conserved in bacteria
JJQ57_RS11715	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JJQ57_RS11730	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JJQ57_RS11765	COG3118	belongs to the thioredoxin family
JJQ57_RS11820	COG5002	protein histidine kinase activity
JJQ57_RS11820	COG2205	protein histidine kinase activity
JJQ57_RS11820	COG0784	Response regulator, receiver
JJQ57_RS11825	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JJQ57_RS11915	COG3300	MHYT domain
JJQ57_RS11915	COG5001	Diguanylate cyclase
JJQ57_RS12030	COG0625	glutathione transferase activity
JJQ57_RS12035	COG1131	(ABC) transporter
JJQ57_RS12040	COG0842	Transport permease protein
JJQ57_RS12085	COG2188	Transcriptional regulator
JJQ57_RS12095	COG2853	Lipoprotein
JJQ57_RS12105	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS12350	COG3179	chitinase
JJQ57_RS12380	COG1335	isochorismatase
JJQ57_RS12420	COG0840	transmembrane signaling receptor activity
JJQ57_RS12435	COG3655	Transcriptional regulator
JJQ57_RS12475	COG2116	formate transmembrane transporter activity
JJQ57_RS12480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS12515	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
JJQ57_RS12530	COG1051	belongs to the nudix hydrolase family
JJQ57_RS12540	COG1024	Enoyl-CoA hydratase
JJQ57_RS12540	COG1250	3-hydroxyacyl-CoA dehydrogenase
JJQ57_RS12550	COG2837	iron assimilation
JJQ57_RS12635	COG1238	metal cluster binding
JJQ57_RS12645	COG1295	ribonuclease BN
JJQ57_RS12670	COG4974	Belongs to the 'phage' integrase family
JJQ57_RS12690	COG1555	photosystem II stabilization
JJQ57_RS12690	COG3568	Endonuclease Exonuclease Phosphatase
JJQ57_RS12700	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JJQ57_RS12715	COG1358	cellular component organization or biogenesis
JJQ57_RS12775	COG1929	Belongs to the glycerate kinase type-1 family
JJQ57_RS12780	COG4644	lycopene metabolic process
JJQ57_RS12835	COG1132	(ABC) transporter
JJQ57_RS12880	COG0659	secondary active sulfate transmembrane transporter activity
JJQ57_RS12885	COG0589	response to stress
JJQ57_RS12905	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JJQ57_RS12920	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS13000	COG1132	(ABC) transporter
JJQ57_RS13045	COG1132	(ABC) transporter
JJQ57_RS13100	COG3938	Belongs to the proline racemase family
JJQ57_RS13105	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JJQ57_RS13110	COG0765	amino acid transport
JJQ57_RS13115	COG0765	amino acid transport
JJQ57_RS13120	COG1126	abc transporter atp-binding protein
JJQ57_RS13125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS13140	COG0583	DNA-binding transcription factor activity
JJQ57_RS13150	COG4106	trans-aconitate 2-methyltransferase activity
JJQ57_RS13160	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JJQ57_RS13165	COG1459	type II secretion system
JJQ57_RS13215	COG0720	synthase
JJQ57_RS13220	COG3604	Transcriptional regulator
JJQ57_RS13280	COG0840	transmembrane signaling receptor activity
JJQ57_RS13285	COG2056	Na+-H+ antiporter family
JJQ57_RS13395	COG2153	protein acetylation
JJQ57_RS13400	COG2850	peptidyl-arginine hydroxylation
JJQ57_RS13440	COG1278	Cold shock
JJQ57_RS13450	COG0542	response to heat
JJQ57_RS13455	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JJQ57_RS13470	COG0492	ferredoxin-NADP+ reductase activity
JJQ57_RS13485	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JJQ57_RS13500	COG0435	Glutathione S-transferase
JJQ57_RS13505	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JJQ57_RS13510	COG2920	part of a sulfur-relay system
JJQ57_RS13550	COG0583	DNA-binding transcription factor activity
JJQ57_RS13555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JJQ57_RS13560	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS13570	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS13575	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS13585	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS13600	COG2197	response regulator
JJQ57_RS13605	COG4771	TonB-dependent receptor
JJQ57_RS13645	COG0582	viral genome integration into host DNA
JJQ57_RS13650	COG2837	iron assimilation
JJQ57_RS13755	COG2249	NAD(P)H dehydrogenase (quinone) activity
JJQ57_RS13770	COG1522	sequence-specific DNA binding
JJQ57_RS13800	COG4191	Histidine kinase
JJQ57_RS13825	COG2203	Gaf domain
JJQ57_RS13825	COG3706	GGDEF domain
JJQ57_RS13825	COG4251	negative regulation of phosphorylation
JJQ57_RS13825	COG5001	Diguanylate cyclase
JJQ57_RS13850	COG0659	secondary active sulfate transmembrane transporter activity
JJQ57_RS13890	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS13900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JJQ57_RS13910	COG0183	Belongs to the thiolase family
JJQ57_RS13915	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS13965	COG0729	surface antigen
JJQ57_RS13975	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JJQ57_RS13980	COG2267	carboxylic ester hydrolase activity
JJQ57_RS13985	COG2453	phosphatase
JJQ57_RS13985	COG0671	phosphoesterase, PA-phosphatase related
JJQ57_RS14000	COG4589	Belongs to the CDS family
JJQ57_RS14005	COG0667	Aldo Keto reductase
JJQ57_RS14015	COG1115	amino acid carrier protein
JJQ57_RS14025	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JJQ57_RS14045	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS14050	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS14055	COG1538	Outer membrane efflux protein
JJQ57_RS14115	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JJQ57_RS14115	COG0543	2 iron, 2 sulfur cluster binding
JJQ57_RS14120	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
JJQ57_RS14125	COG4638	Rieske (2fe-2S)
JJQ57_RS14140	COG4948	Mandelate Racemase Muconate Lactonizing
JJQ57_RS14150	COG3485	protocatechuate 3,4-dioxygenase
JJQ57_RS14185	COG2807	transmembrane transport
JJQ57_RS14190	COG0590	tRNA wobble adenosine to inosine editing
JJQ57_RS14205	COG2318	DinB family
JJQ57_RS14265	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JJQ57_RS14270	COG2863	cytochrome
JJQ57_RS14275	COG3258	Cytochrome c
JJQ57_RS14280	COG0642	Histidine kinase
JJQ57_RS14315	COG0625	glutathione transferase activity
JJQ57_RS14320	COG2814	Major facilitator Superfamily
JJQ57_RS14335	COG0583	DNA-binding transcription factor activity
JJQ57_RS14340	COG1595	DNA-templated transcription, initiation
JJQ57_RS14345	COG3712	iron ion homeostasis
JJQ57_RS14370	COG3210	domain, Protein
JJQ57_RS14435	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JJQ57_RS14445	COG2382	esterase
JJQ57_RS14465	COG0583	DNA-binding transcription factor activity
JJQ57_RS14485	COG1760	l-serine dehydratase
JJQ57_RS14490	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JJQ57_RS14525	COG2217	Heavy metal translocating P-type atpase
JJQ57_RS14540	COG0583	DNA-binding transcription factor activity
JJQ57_RS14555	COG1566	PFAM secretion protein HlyD family protein
JJQ57_RS14615	COG1335	isochorismatase
JJQ57_RS14625	COG0583	DNA-binding transcription factor activity
JJQ57_RS14665	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JJQ57_RS14670	COG1121	(ABC) transporter
JJQ57_RS14710	COG0657	acetylesterase activity
JJQ57_RS14715	COG4774	siderophore transport
JJQ57_RS14760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS14785	COG0735	belongs to the Fur family
JJQ57_RS14795	COG1304	FMN binding
JJQ57_RS14825	COG4566	intracellular signal transduction
JJQ57_RS14915	COG3829	transcription factor binding
JJQ57_RS14940	COG3829	transcription factor binding
JJQ57_RS14945	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JJQ57_RS14950	COG0584	glycerophosphoryl diester phosphodiesterase
JJQ57_RS14955	COG2011	ABC-type metal ion transport system permease component
JJQ57_RS14965	COG1464	Belongs to the NlpA lipoprotein family
JJQ57_RS14990	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JJQ57_RS14995	COG1070	Carbohydrate kinase
JJQ57_RS15000	COG0246	Mannitol dehydrogenase
JJQ57_RS15015	COG1175	transmembrane transport
JJQ57_RS15030	COG1917	Cupin 2, conserved barrel domain protein
JJQ57_RS15030	COG4977	sequence-specific DNA binding
JJQ57_RS15045	COG1116	anion transmembrane transporter activity
JJQ57_RS15050	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS15055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS15075	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS15090	COG3265	gluconokinase activity
JJQ57_RS15095	COG1609	Transcriptional regulator
JJQ57_RS15135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS15140	COG0583	DNA-binding transcription factor activity
JJQ57_RS15165	COG1396	sequence-specific DNA binding
JJQ57_RS15175	COG2175	clavaminate synthase activity
JJQ57_RS15185	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
JJQ57_RS15190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS15215	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JJQ57_RS15215	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JJQ57_RS15225	COG3469	chitinase activity
JJQ57_RS15230	COG2188	Transcriptional regulator
JJQ57_RS15235	COG1053	succinate dehydrogenase
JJQ57_RS15270	COG4772	TonB-dependent receptor
JJQ57_RS15315	COG0431	NADPH-dependent FMN reductase
JJQ57_RS15320	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JJQ57_RS15330	COG0640	Transcriptional regulator
JJQ57_RS15335	COG2207	Transcriptional regulator
JJQ57_RS15340	COG1064	alcohol dehydrogenase
JJQ57_RS15365	COG1309	transcriptional regulator
JJQ57_RS15375	COG2329	Antibiotic biosynthesis monooxygenase
JJQ57_RS15410	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JJQ57_RS15420	COG1609	Transcriptional regulator
JJQ57_RS15450	COG0252	asparaginase activity
JJQ57_RS15455	COG1115	amino acid carrier protein
JJQ57_RS15500	COG1053	succinate dehydrogenase
JJQ57_RS15510	COG0728	peptidoglycan biosynthetic process
JJQ57_RS15570	COG2258	MOSC domain
JJQ57_RS15640	COG2508	Transcriptional regulator
JJQ57_RS15660	COG2409	Drug exporters of the RND superfamily
JJQ57_RS15680	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS15695	COG2072	flavoprotein involved in K transport
JJQ57_RS15715	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JJQ57_RS15735	COG5001	Diguanylate cyclase
JJQ57_RS15750	COG2192	nodulation
JJQ57_RS15755	COG2814	Major facilitator Superfamily
JJQ57_RS15785	COG1104	cysteine desulfurase activity
JJQ57_RS15790	COG4172	Belongs to the ABC transporter superfamily
JJQ57_RS15795	COG4239	(ABC) transporter, permease
JJQ57_RS15800	COG4174	ABC transporter (Permease)
JJQ57_RS15810	COG4771	TonB-dependent receptor
JJQ57_RS15825	COG0583	DNA-binding transcription factor activity
JJQ57_RS15845	COG1595	DNA-templated transcription, initiation
JJQ57_RS15860	COG2207	Transcriptional regulator
JJQ57_RS15880	COG0564	pseudouridine synthase activity
JJQ57_RS15890	COG0531	amino acid
JJQ57_RS15895	COG0174	glutamine synthetase
JJQ57_RS15915	COG0028	Belongs to the TPP enzyme family
JJQ57_RS15930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JJQ57_RS15950	COG1522	sequence-specific DNA binding
JJQ57_RS15995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS16000	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS16010	COG3204	pilus organization
JJQ57_RS16015	COG0789	Transcriptional regulator
JJQ57_RS16020	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS16025	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JJQ57_RS16055	COG0179	Fumarylacetoacetate (FAA) hydrolase
JJQ57_RS16065	COG2271	Major facilitator Superfamily
JJQ57_RS16070	COG3290	protein histidine kinase activity
JJQ57_RS16070	COG3829	transcription factor binding
JJQ57_RS16075	COG2610	gluconate transmembrane transporter activity
JJQ57_RS16080	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS16085	COG2031	fatty acid transporter
JJQ57_RS16100	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JJQ57_RS16105	COG0583	DNA-binding transcription factor activity
JJQ57_RS16110	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JJQ57_RS16115	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS16135	COG2205	protein histidine kinase activity
JJQ57_RS16200	COG3851	Histidine kinase
JJQ57_RS16220	COG2205	protein histidine kinase activity
JJQ57_RS16220	COG0784	Response regulator, receiver
JJQ57_RS16240	COG2194	sulfuric ester hydrolase activity
JJQ57_RS16295	COG3179	chitinase
JJQ57_RS16405	COG0740	serine-type endopeptidase activity
JJQ57_RS16410	COG4695	Portal protein
JJQ57_RS16420	COG1802	Transcriptional regulator
JJQ57_RS16420	COG4626	Terminase
JJQ57_RS16495	COG0305	Participates in initiation and elongation during chromosome replication
JJQ57_RS16525	COG2932	Transcriptional regulator
JJQ57_RS16530	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JJQ57_RS16620	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JJQ57_RS16690	COG0488	(ABC) transporter
JJQ57_RS16705	COG0583	DNA-binding transcription factor activity
JJQ57_RS16710	COG1278	Cold shock
JJQ57_RS16760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JJQ57_RS16765	COG1609	Transcriptional regulator
JJQ57_RS16770	COG1172	Belongs to the binding-protein-dependent transport system permease family
JJQ57_RS16775	COG1129	ABC transporter
JJQ57_RS16785	COG2204	response regulator
JJQ57_RS16800	COG2010	Cytochrome c
JJQ57_RS16805	COG0753	catalase activity
JJQ57_RS16835	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JJQ57_RS16840	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
JJQ57_RS16845	COG2080	2 iron, 2 sulfur cluster binding
JJQ57_RS16870	COG1944	ATP diphosphatase activity
JJQ57_RS16890	COG4771	TonB-dependent receptor
JJQ57_RS16895	COG0275	rRNA processing
JJQ57_RS16900	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JJQ57_RS16900	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JJQ57_RS16915	COG0579	oxidoreductase
JJQ57_RS16945	COG1595	DNA-templated transcription, initiation
JJQ57_RS16950	COG3712	iron ion homeostasis
JJQ57_RS16970	COG2814	Major facilitator Superfamily
JJQ57_RS17020	COG2197	response regulator
JJQ57_RS17045	COG2366	antibiotic biosynthetic process
JJQ57_RS17060	COG0625	glutathione transferase activity
JJQ57_RS17080	COG0417	DNA replication proofreading
JJQ57_RS17125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS17195	COG1309	transcriptional regulator
JJQ57_RS17215	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JJQ57_RS17220	COG0583	DNA-binding transcription factor activity
JJQ57_RS17230	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JJQ57_RS17235	COG2354	Protein conserved in bacteria
JJQ57_RS17240	COG3278	Belongs to the heme-copper respiratory oxidase family
JJQ57_RS17250	COG2239	Acts as a magnesium transporter
JJQ57_RS17265	COG3706	GGDEF domain
JJQ57_RS17265	COG5001	Diguanylate cyclase
JJQ57_RS17265	COG2203	Gaf domain
JJQ57_RS17265	COG4251	negative regulation of phosphorylation
JJQ57_RS17270	COG4977	sequence-specific DNA binding
JJQ57_RS17275	COG3813	Protein conserved in bacteria
JJQ57_RS17335	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JJQ57_RS17360	COG0604	alcohol dehydrogenase
JJQ57_RS17365	COG0616	signal peptide processing
JJQ57_RS17385	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS17390	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS17395	COG0583	DNA-binding transcription factor activity
JJQ57_RS17420	COG1024	Enoyl-CoA hydratase
JJQ57_RS17430	COG0531	amino acid
JJQ57_RS17445	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JJQ57_RS17465	COG1388	LysM domain
JJQ57_RS17465	COG0741	lytic transglycosylase activity
JJQ57_RS17470	COG4166	transmembrane transport
JJQ57_RS17475	COG4166	transmembrane transport
JJQ57_RS17480	COG4174	ABC transporter (Permease)
JJQ57_RS17485	COG4239	(ABC) transporter, permease
JJQ57_RS17490	COG4172	Belongs to the ABC transporter superfamily
JJQ57_RS17500	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS17515	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JJQ57_RS17535	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS17540	COG2205	protein histidine kinase activity
JJQ57_RS17545	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JJQ57_RS17590	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JJQ57_RS17610	COG0589	response to stress
JJQ57_RS17630	COG2201	protein-glutamate methylesterase activity
JJQ57_RS17640	COG2223	nitrite transmembrane transporter activity
JJQ57_RS17645	COG0515	serine threonine protein kinase
JJQ57_RS17650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JJQ57_RS17655	COG2146	nitrite reductase [NAD(P)H] activity
JJQ57_RS17660	COG0243	molybdopterin cofactor binding
JJQ57_RS17680	COG0668	transmembrane transport
JJQ57_RS17715	COG0189	ligase activity
JJQ57_RS17715	COG4067	protein conserved in archaea
JJQ57_RS17755	COG2909	trisaccharide binding
JJQ57_RS17760	COG2909	trisaccharide binding
JJQ57_RS17795	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JJQ57_RS17845	COG0519	Catalyzes the synthesis of GMP from XMP
JJQ57_RS17860	COG0667	Aldo Keto reductase
JJQ57_RS17870	COG1250	3-hydroxyacyl-CoA dehydrogenase
JJQ57_RS17870	COG1024	Enoyl-CoA hydratase
JJQ57_RS17875	COG0183	Belongs to the thiolase family
JJQ57_RS17895	COG1305	Transglutaminase-like
JJQ57_RS17905	COG2308	Evidence 4 Homologs of previously reported genes of
JJQ57_RS17930	COG1317	bacterial-type flagellum organization
JJQ57_RS18040	COG4789	Type iii secretion
JJQ57_RS18090	COG4790	Type iii secretion
JJQ57_RS18095	COG4794	Type iii secretion
JJQ57_RS18100	COG4791	protein targeting
JJQ57_RS18105	COG4792	protein secretion
JJQ57_RS18185	COG2840	Smr protein MutS2
JJQ57_RS18205	COG2815	serine threonine protein kinase
JJQ57_RS18205	COG0515	serine threonine protein kinase
JJQ57_RS18245	COG2204	response regulator
JJQ57_RS18315	COG0625	glutathione transferase activity
JJQ57_RS18320	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JJQ57_RS18335	COG3135	benzoate transporter
JJQ57_RS18350	COG2130	NADP-dependent
JJQ57_RS18360	COG0840	transmembrane signaling receptor activity
JJQ57_RS18370	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JJQ57_RS18410	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS18415	COG2205	protein histidine kinase activity
JJQ57_RS18440	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS18450	COG1024	Enoyl-CoA hydratase
JJQ57_RS18455	COG1250	3-hydroxyacyl-CoA dehydrogenase
JJQ57_RS18460	COG2186	Transcriptional regulator
JJQ57_RS18465	COG2807	transmembrane transport
JJQ57_RS18470	COG0628	permease
JJQ57_RS18480	COG0625	glutathione transferase activity
JJQ57_RS18710	COG2003	Belongs to the UPF0758 family
JJQ57_RS18765	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JJQ57_RS18765	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JJQ57_RS18770	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JJQ57_RS18775	COG1252	NADH dehydrogenase
JJQ57_RS18780	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
JJQ57_RS18835	COG0583	DNA-binding transcription factor activity
JJQ57_RS18845	COG0583	DNA-binding transcription factor activity
JJQ57_RS18860	COG2837	iron assimilation
JJQ57_RS18865	COG0582	viral genome integration into host DNA
JJQ57_RS18885	COG0625	glutathione transferase activity
JJQ57_RS18890	COG1956	GAF domain-containing protein
JJQ57_RS18895	COG2255	four-way junction helicase activity
JJQ57_RS18900	COG2205	protein histidine kinase activity
JJQ57_RS18900	COG5002	protein histidine kinase activity
JJQ57_RS18900	COG0784	Response regulator, receiver
JJQ57_RS18905	COG1846	Transcriptional regulator
JJQ57_RS18910	COG0386	Belongs to the glutathione peroxidase family
JJQ57_RS18920	COG0436	Aminotransferase
JJQ57_RS18935	COG2866	Carboxypeptidase
JJQ57_RS18975	COG3384	dioxygenase
JJQ57_RS18985	COG1024	Enoyl-CoA hydratase
JJQ57_RS18995	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
JJQ57_RS19000	COG3214	Protein conserved in bacteria
JJQ57_RS19010	COG0583	DNA-binding transcription factor activity
JJQ57_RS19020	COG0583	DNA-binding transcription factor activity
JJQ57_RS19025	COG1846	Transcriptional regulator
JJQ57_RS19030	COG1764	response to oxidative stress
JJQ57_RS19070	COG4181	ATPase activity
JJQ57_RS19075	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
JJQ57_RS19090	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JJQ57_RS19105	COG2259	Doxx family
JJQ57_RS19110	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
JJQ57_RS19115	COG0084	hydrolase, TatD family'
JJQ57_RS19160	COG0714	Associated with various cellular activities
JJQ57_RS19170	COG0583	DNA-binding transcription factor activity
JJQ57_RS19180	COG0583	DNA-binding transcription factor activity
JJQ57_RS19210	COG1309	transcriptional regulator
JJQ57_RS19225	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JJQ57_RS19230	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS19235	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JJQ57_RS19250	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS19265	COG1595	DNA-templated transcription, initiation
JJQ57_RS19270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JJQ57_RS19280	COG2197	response regulator
JJQ57_RS19285	COG3047	cAMP biosynthetic process
JJQ57_RS19285	COG2885	chlorophyll binding
JJQ57_RS19315	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JJQ57_RS19345	COG1120	ATPase activity
JJQ57_RS19355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JJQ57_RS19385	COG0840	transmembrane signaling receptor activity
JJQ57_RS19390	COG0583	DNA-binding transcription factor activity
JJQ57_RS19395	COG1473	amidohydrolase
JJQ57_RS19400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS19405	COG4215	(ABC) transporter
JJQ57_RS19410	COG4160	amino acid transport
JJQ57_RS19445	COG1309	transcriptional regulator
JJQ57_RS19450	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS19455	COG2814	Major facilitator Superfamily
JJQ57_RS19475	COG2233	PERMEase
JJQ57_RS19485	COG0183	Belongs to the thiolase family
JJQ57_RS19500	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JJQ57_RS19585	COG0084	hydrolase, TatD family'
JJQ57_RS19605	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JJQ57_RS19615	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JJQ57_RS19645	COG1399	metal-binding, possibly nucleic acid-binding protein
JJQ57_RS19655	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JJQ57_RS19655	COG0616	signal peptide processing
JJQ57_RS19660	COG0546	phosphoglycolate phosphatase activity
JJQ57_RS19670	COG1530	ribonuclease E activity
JJQ57_RS19680	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JJQ57_RS19700	COG0848	biopolymer transport protein
JJQ57_RS19705	COG0811	peptide transport
JJQ57_RS19710	COG2333	competence protein COMEC
JJQ57_RS19710	COG0658	competence protein
JJQ57_RS19730	COG4591	ABC-type transport system involved in lipoprotein release permease component
JJQ57_RS19745	COG0584	glycerophosphoryl diester phosphodiesterase
JJQ57_RS19760	COG1477	protein flavinylation
JJQ57_RS19795	COG1113	amino acid transport
JJQ57_RS19805	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JJQ57_RS19880	COG0589	response to stress
JJQ57_RS19890	COG0488	(ABC) transporter
JJQ57_RS19895	COG0741	lytic transglycosylase activity
JJQ57_RS19915	COG1070	Carbohydrate kinase
JJQ57_RS19920	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JJQ57_RS19940	COG0521	Mo-molybdopterin cofactor biosynthetic process
JJQ57_RS19970	COG1309	transcriptional regulator
JJQ57_RS19975	COG0625	glutathione transferase activity
JJQ57_RS19985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JJQ57_RS19995	COG0004	ammonium transporteR
JJQ57_RS20020	COG2205	protein histidine kinase activity
JJQ57_RS20020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS20025	COG2197	response regulator
JJQ57_RS20030	COG3171	Protein conserved in bacteria
JJQ57_RS20035	COG2027	D-alanyl-D-alanine carboxypeptidase
JJQ57_RS20045	COG3130	regulation of translation
JJQ57_RS20095	COG0297	glycogen (starch) synthase activity
JJQ57_RS20120	COG2342	PFAM TM1410 hypothetical-related protein
JJQ57_RS20135	COG0714	Associated with various cellular activities
JJQ57_RS20175	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS20205	COG0308	aminopeptidase N
JJQ57_RS20215	COG3139	Protein of unknown function (DUF1315)
JJQ57_RS20225	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JJQ57_RS20250	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS20250	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS20350	COG1286	toxin biosynthetic process
JJQ57_RS20355	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JJQ57_RS20360	COG0285	dihydrofolate synthase activity
JJQ57_RS20400	COG2226	methyltransferase
JJQ57_RS20420	COG0251	oxidation-reduction process
JJQ57_RS20425	COG0583	DNA-binding transcription factor activity
JJQ57_RS20445	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS20460	COG0800	Aldolase
JJQ57_RS20465	COG0596	Alpha beta hydrolase
JJQ57_RS20500	COG0583	DNA-binding transcription factor activity
JJQ57_RS20540	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JJQ57_RS20565	COG1086	Polysaccharide biosynthesis protein
JJQ57_RS20595	COG1022	Amp-dependent synthetase and ligase
JJQ57_RS20625	COG0784	Response regulator, receiver
JJQ57_RS20625	COG5002	protein histidine kinase activity
JJQ57_RS20625	COG2205	protein histidine kinase activity
JJQ57_RS20665	COG1846	Transcriptional regulator
JJQ57_RS20675	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JJQ57_RS20675	COG2010	Cytochrome c
JJQ57_RS20680	COG2010	Cytochrome c
JJQ57_RS20680	COG1529	Aldehyde oxidase and xanthine dehydrogenase
JJQ57_RS20685	COG2207	Transcriptional regulator
JJQ57_RS20760	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JJQ57_RS20765	COG1053	succinate dehydrogenase
JJQ57_RS20770	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
JJQ57_RS20775	COG2009	succinate dehydrogenase
JJQ57_RS20805	COG2084	Dehydrogenase
JJQ57_RS20820	COG3738	Protein conserved in bacteria
JJQ57_RS20845	COG0251	oxidation-reduction process
JJQ57_RS20850	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS20860	COG0174	glutamine synthetase
JJQ57_RS20865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS20885	COG0840	transmembrane signaling receptor activity
JJQ57_RS20900	COG3278	Belongs to the heme-copper respiratory oxidase family
JJQ57_RS20915	COG2010	Cytochrome c
JJQ57_RS20920	COG3278	Belongs to the heme-copper respiratory oxidase family
JJQ57_RS20935	COG2010	Cytochrome c
JJQ57_RS20940	COG0348	domain, Protein
JJQ57_RS20950	COG2217	Heavy metal translocating P-type atpase
JJQ57_RS20990	COG2076	Multidrug Resistance protein
JJQ57_RS21020	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS21035	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JJQ57_RS21065	COG1196	nuclear chromosome segregation
JJQ57_RS21095	COG0402	S-adenosylhomocysteine deaminase activity
JJQ57_RS21105	COG2252	PERMEase
JJQ57_RS21165	COG2233	PERMEase
JJQ57_RS21180	COG1309	transcriptional regulator
JJQ57_RS21190	COG3960	tartronate-semialdehyde synthase activity
JJQ57_RS21195	COG3622	Belongs to the hyi family
JJQ57_RS21200	COG2084	Dehydrogenase
JJQ57_RS21210	COG0469	pyruvate kinase activity
JJQ57_RS21215	COG4413	Urea transporter
JJQ57_RS21220	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JJQ57_RS21235	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JJQ57_RS21245	COG3192	ethanolamine utilization protein
JJQ57_RS21260	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS21265	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JJQ57_RS21340	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JJQ57_RS21350	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS21355	COG1496	oxidoreductase activity
JJQ57_RS21365	COG2378	regulation of single-species biofilm formation
JJQ57_RS21380	COG0835	chemotaxis
JJQ57_RS21390	COG1192	Involved in chromosome partitioning
JJQ57_RS21395	COG1360	Flagellar Motor Protein
JJQ57_RS21400	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JJQ57_RS21410	COG2198	Histidine kinase
JJQ57_RS21410	COG0784	Response regulator, receiver
JJQ57_RS21410	COG0643	Histidine kinase
JJQ57_RS21440	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JJQ57_RS21445	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JJQ57_RS21465	COG1987	bacterial-type flagellum assembly
JJQ57_RS21505	COG2832	Protein of unknown function (DUF454)
JJQ57_RS21520	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS21525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS21535	COG5001	Diguanylate cyclase
JJQ57_RS21535	COG3300	MHYT domain
JJQ57_RS21590	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JJQ57_RS21605	COG2226	methyltransferase
JJQ57_RS21620	COG2205	protein histidine kinase activity
JJQ57_RS21625	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS21630	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JJQ57_RS21630	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JJQ57_RS21635	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JJQ57_RS21640	COG1943	Transposase
JJQ57_RS21675	COG0531	amino acid
JJQ57_RS21705	COG0583	DNA-binding transcription factor activity
JJQ57_RS21710	COG3257	ureidoglycine aminohydrolase activity
JJQ57_RS21725	COG0604	alcohol dehydrogenase
JJQ57_RS21725	COG3321	synthase
JJQ57_RS21725	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS21730	COG2197	response regulator
JJQ57_RS21770	COG0583	DNA-binding transcription factor activity
JJQ57_RS21775	COG0667	Aldo Keto reductase
JJQ57_RS21800	COG0242	peptide deformylase activity
JJQ57_RS21810	COG2199	diguanylate cyclase activity
JJQ57_RS21815	COG2885	chlorophyll binding
JJQ57_RS21845	COG1132	(ABC) transporter
JJQ57_RS21855	COG4628	conserved protein (DUF2132)
JJQ57_RS21860	COG2133	pyrroloquinoline quinone binding
JJQ57_RS21875	COG2207	Transcriptional regulator
JJQ57_RS21880	COG0477	Major facilitator Superfamily
JJQ57_RS21895	COG2882	bacterial-type flagellum organization
JJQ57_RS21950	COG1516	flagellar protein fliS
JJQ57_RS21955	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JJQ57_RS21965	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JJQ57_RS21970	COG1216	Glycosyl transferase, family 2
JJQ57_RS21970	COG0438	transferase activity, transferring glycosyl groups
JJQ57_RS21995	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS22000	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JJQ57_RS22045	COG4787	bacterial-type flagellum-dependent cell motility
JJQ57_RS22055	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
JJQ57_RS22065	COG1815	bacterial-type flagellum-dependent cell motility
JJQ57_RS22110	COG0326	Molecular chaperone. Has ATPase activity
JJQ57_RS22125	COG3189	MarR family transcriptional regulator
JJQ57_RS22145	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JJQ57_RS22160	COG2212	antiporter activity
JJQ57_RS22165	COG1863	multisubunit Na H antiporter MnhE subunit
JJQ57_RS22170	COG0651	ATP synthesis coupled electron transport
JJQ57_RS22175	COG1006	Multisubunit Na H antiporter MnhC subunit
JJQ57_RS22180	COG2111	Na H antiporter
JJQ57_RS22180	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JJQ57_RS22185	COG3133	Outer membrane lipoprotein
JJQ57_RS22195	COG1929	Belongs to the glycerate kinase type-1 family
JJQ57_RS22200	COG2610	gluconate transmembrane transporter activity
JJQ57_RS22205	COG3835	regulator
JJQ57_RS22215	COG2885	chlorophyll binding
JJQ57_RS22230	COG1199	ATP-dependent helicase activity
JJQ57_RS22270	COG2860	membrane
JJQ57_RS22285	COG0653	protein targeting
JJQ57_RS22290	COG0625	glutathione transferase activity
JJQ57_RS22315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS22320	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS22345	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS22350	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS22355	COG1024	Enoyl-CoA hydratase
JJQ57_RS22360	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS22370	COG2814	Major facilitator Superfamily
JJQ57_RS22375	COG2030	dehydratase
JJQ57_RS22385	COG0183	Belongs to the thiolase family
JJQ57_RS22420	COG3179	chitinase
JJQ57_RS22520	COG0740	serine-type endopeptidase activity
JJQ57_RS22525	COG4695	Portal protein
JJQ57_RS22535	COG4626	Terminase
JJQ57_RS22535	COG1802	Transcriptional regulator
JJQ57_RS22575	COG0675	Transposase, IS605 OrfB family
JJQ57_RS22615	COG0305	Participates in initiation and elongation during chromosome replication
JJQ57_RS22635	COG2932	Transcriptional regulator
JJQ57_RS22715	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JJQ57_RS22800	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
JJQ57_RS22805	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
JJQ57_RS22820	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JJQ57_RS22830	COG0425	Belongs to the sulfur carrier protein TusA family
JJQ57_RS22885	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JJQ57_RS22890	COG3188	usher protein
JJQ57_RS22910	COG1051	belongs to the nudix hydrolase family
JJQ57_RS22975	COG1289	transmembrane transporter activity
JJQ57_RS22990	COG0583	DNA-binding transcription factor activity
JJQ57_RS23000	COG1566	PFAM secretion protein HlyD family protein
JJQ57_RS23010	COG1335	isochorismatase
JJQ57_RS23080	COG1074	ATP-dependent DNA helicase activity
JJQ57_RS23185	COG4644	lycopene metabolic process
JJQ57_RS23230	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JJQ57_RS23260	COG0402	S-adenosylhomocysteine deaminase activity
JJQ57_RS23275	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS23290	COG0786	glutamate:sodium symporter activity
JJQ57_RS23335	COG0676	glucose-6-phosphate 1-epimerase activity
JJQ57_RS23345	COG3842	ATPase activity
JJQ57_RS23350	COG0395	ABC-type sugar transport system, permease component
JJQ57_RS23355	COG1175	transmembrane transport
JJQ57_RS23405	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JJQ57_RS23410	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JJQ57_RS23415	COG0009	L-threonylcarbamoyladenylate synthase
JJQ57_RS23420	COG0613	PHP domain protein
JJQ57_RS23430	COG2350	Protein conserved in bacteria
JJQ57_RS23440	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS23460	COG0778	Nitroreductase
JJQ57_RS23465	COG0727	PFAM Uncharacterised protein family (UPF0153)
JJQ57_RS23470	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JJQ57_RS23475	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JJQ57_RS23480	COG1127	ABC transporter
JJQ57_RS23510	COG0438	transferase activity, transferring glycosyl groups
JJQ57_RS23510	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JJQ57_RS23525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JJQ57_RS23555	COG0509	glycine decarboxylation via glycine cleavage system
JJQ57_RS23580	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JJQ57_RS23590	COG1132	(ABC) transporter
JJQ57_RS23620	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JJQ57_RS23625	COG3162	membrane
JJQ57_RS23645	COG2853	Lipoprotein
JJQ57_RS23750	COG1560	Kdo2-lipid A biosynthetic process
JJQ57_RS23760	COG2894	cell division
JJQ57_RS23770	COG0564	pseudouridine synthase activity
JJQ57_RS23800	COG1176	ABC-type spermidine putrescine transport system, permease component I
JJQ57_RS23815	COG0560	Phosphoserine phosphatase
JJQ57_RS23820	COG0604	alcohol dehydrogenase
JJQ57_RS23820	COG3321	synthase
JJQ57_RS23830	COG2200	EAL domain
JJQ57_RS23880	COG0385	Bile acid
JJQ57_RS23885	COG2076	Multidrug Resistance protein
JJQ57_RS23900	COG4772	TonB-dependent receptor
JJQ57_RS23915	COG2205	protein histidine kinase activity
JJQ57_RS23920	COG1201	RNA secondary structure unwinding
JJQ57_RS23990	COG1595	DNA-templated transcription, initiation
JJQ57_RS24045	COG0537	adenosine 5'-monophosphoramidase activity
JJQ57_RS24055	COG1643	Atp-dependent helicase
JJQ57_RS24065	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS24070	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS24075	COG2267	carboxylic ester hydrolase activity
JJQ57_RS24080	COG2030	dehydratase
JJQ57_RS24085	COG2814	Major facilitator Superfamily
JJQ57_RS24125	COG0589	response to stress
JJQ57_RS24140	COG2084	Dehydrogenase
JJQ57_RS24145	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JJQ57_RS24155	COG3639	organic phosphonate transmembrane transporter activity
JJQ57_RS24185	COG0583	DNA-binding transcription factor activity
JJQ57_RS24235	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS24240	COG3938	Belongs to the proline racemase family
JJQ57_RS24245	COG1802	Transcriptional regulator
JJQ57_RS24280	COG2819	hydrolase of the alpha beta superfamily
JJQ57_RS24295	COG1959	2 iron, 2 sulfur cluster binding
JJQ57_RS24300	COG1607	acyl-coa hydrolase
JJQ57_RS24370	COG0542	response to heat
JJQ57_RS24385	COG1280	lysine exporter protein (LysE YggA)
JJQ57_RS24405	COG0243	molybdopterin cofactor binding
JJQ57_RS24410	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
JJQ57_RS24415	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS24415	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS24425	COG0789	Transcriptional regulator
JJQ57_RS24470	COG0542	response to heat
JJQ57_RS24480	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
JJQ57_RS24480	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
JJQ57_RS24535	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
JJQ57_RS24545	COG0210	DNA helicase
JJQ57_RS24560	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
JJQ57_RS24570	COG0514	ATP-dependent DNA helicase (RecQ)
JJQ57_RS24645	COG0024	Methionine aminopeptidase
JJQ57_RS24675	COG1061	Type III restriction enzyme res subunit
JJQ57_RS24710	COG4221	oxidoreductase activity
JJQ57_RS24715	COG2124	cytochrome p450
JJQ57_RS24755	COG1752	Esterase of the alpha-beta hydrolase superfamily
JJQ57_RS24775	COG5001	Diguanylate cyclase
JJQ57_RS24775	COG4251	negative regulation of phosphorylation
JJQ57_RS24775	COG3706	GGDEF domain
JJQ57_RS24775	COG2203	Gaf domain
JJQ57_RS24780	COG0514	ATP-dependent DNA helicase (RecQ)
JJQ57_RS24790	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS24805	COG0835	chemotaxis
JJQ57_RS24805	COG0784	Response regulator, receiver
JJQ57_RS24825	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
JJQ57_RS24850	COG0697	spore germination
JJQ57_RS24860	COG1566	PFAM secretion protein HlyD family protein
JJQ57_RS24935	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JJQ57_RS24945	COG3454	Phosphonate metabolism
JJQ57_RS24950	COG4778	phosphonate C-P lyase system protein PhnL
JJQ57_RS24955	COG4107	phosphonate C-P lyase system protein PhnK
JJQ57_RS24960	COG3627	carbon phosphorus lyase activity
JJQ57_RS24965	COG3626	phosphonate metabolism
JJQ57_RS24975	COG3624	Phosphonate C-P lyase system protein PhnG
JJQ57_RS24980	COG2188	Transcriptional regulator
JJQ57_RS24985	COG3639	organic phosphonate transmembrane transporter activity
JJQ57_RS24990	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
JJQ57_RS25065	COG0583	DNA-binding transcription factor activity
JJQ57_RS25120	COG1629	transport
JJQ57_RS25160	COG0508	dehydrogenase complex catalyzes the overall conversion of
JJQ57_RS25205	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JJQ57_RS25215	COG1024	Enoyl-CoA hydratase
JJQ57_RS25220	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS25240	COG1346	cytolysis
JJQ57_RS25245	COG1380	Effector of murein hydrolase LrgA
JJQ57_RS25250	COG0583	DNA-binding transcription factor activity
JJQ57_RS25275	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JJQ57_RS25300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS25310	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS25315	COG0431	NADPH-dependent FMN reductase
JJQ57_RS25325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS25330	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JJQ57_RS25335	COG0450	alkyl hydroperoxide reductase
JJQ57_RS25385	COG0183	Belongs to the thiolase family
JJQ57_RS25415	COG0367	asparagine synthase
JJQ57_RS25420	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JJQ57_RS25420	COG0189	ligase activity
JJQ57_RS25425	COG1363	Peptidase, m42
JJQ57_RS25430	COG2205	protein histidine kinase activity
JJQ57_RS25430	COG0784	Response regulator, receiver
JJQ57_RS25430	COG5002	protein histidine kinase activity
JJQ57_RS25450	COG0513	Belongs to the DEAD box helicase family
JJQ57_RS25455	COG0477	Major facilitator Superfamily
JJQ57_RS25460	COG0668	transmembrane transport
JJQ57_RS25465	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JJQ57_RS25480	COG0791	NLP P60 protein
JJQ57_RS25565	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
JJQ57_RS25580	COG0602	queuosine metabolic process
JJQ57_RS25585	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
JJQ57_RS25615	COG0824	Thioesterase
JJQ57_RS25645	COG0783	Belongs to the Dps family
JJQ57_RS25705	COG0488	(ABC) transporter
JJQ57_RS25760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JJQ57_RS25765	COG0583	DNA-binding transcription factor activity
JJQ57_RS25780	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JJQ57_RS25790	COG3264	Mechanosensitive ion channel
JJQ57_RS25790	COG1196	nuclear chromosome segregation
JJQ57_RS25795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JJQ57_RS25795	COG0116	Belongs to the methyltransferase superfamily
JJQ57_RS25805	COG0210	DNA helicase
JJQ57_RS25830	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JJQ57_RS25865	COG2207	Transcriptional regulator
JJQ57_RS25870	COG4221	oxidoreductase activity
JJQ57_RS25880	COG1247	-acetyltransferase
JJQ57_RS25900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JJQ57_RS25925	COG0384	phenazine biosynthesis protein PhzF
JJQ57_RS25955	COG5006	permease, DMT superfamily
JJQ57_RS25970	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JJQ57_RS25985	COG3795	YCII-related domain
JJQ57_RS25995	COG2814	Major facilitator Superfamily
JJQ57_RS26000	COG4941	Belongs to the sigma-70 factor family
JJQ57_RS26010	COG3795	YCII-related domain
JJQ57_RS26020	COG2197	response regulator
JJQ57_RS26025	COG1982	Orn Lys Arg decarboxylase major
JJQ57_RS26030	COG0189	ligase activity
JJQ57_RS26035	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS26050	COG0765	amino acid transport
JJQ57_RS26055	COG0765	amino acid transport
JJQ57_RS26060	COG1126	abc transporter atp-binding protein
JJQ57_RS26085	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS26100	COG1253	flavin adenine dinucleotide binding
JJQ57_RS26105	COG0300	oxidoreductase activity
JJQ57_RS26115	COG0583	DNA-binding transcription factor activity
JJQ57_RS26120	COG1864	DNA RNA non-specific endonuclease
JJQ57_RS26120	COG3591	Belongs to the peptidase S1B family
JJQ57_RS26125	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JJQ57_RS26130	COG4319	ketosteroid isomerase
JJQ57_RS26145	COG4774	siderophore transport
JJQ57_RS26190	COG2814	Major facilitator Superfamily
JJQ57_RS26210	COG0583	DNA-binding transcription factor activity
JJQ57_RS26220	COG0121	glutamine amidotransferase
JJQ57_RS26250	COG3712	iron ion homeostasis
JJQ57_RS26255	COG1595	DNA-templated transcription, initiation
JJQ57_RS26270	COG1230	cation diffusion facilitator family transporter
JJQ57_RS26275	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JJQ57_RS26335	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS26355	COG0406	alpha-ribazole phosphatase activity
JJQ57_RS26385	COG0778	Nitroreductase
JJQ57_RS26400	COG4206	TonB-dependent receptor
JJQ57_RS26410	COG1802	Transcriptional regulator
JJQ57_RS26420	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS26455	COG0477	Major facilitator Superfamily
JJQ57_RS26475	COG0765	amino acid transport
JJQ57_RS26485	COG1126	abc transporter atp-binding protein
JJQ57_RS26495	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JJQ57_RS26500	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS26550	COG4191	Histidine kinase
JJQ57_RS26550	COG0784	Response regulator, receiver
JJQ57_RS26605	COG1289	transmembrane transporter activity
JJQ57_RS26620	COG2207	Transcriptional regulator
JJQ57_RS26640	COG2249	NAD(P)H dehydrogenase (quinone) activity
JJQ57_RS26645	COG2957	Belongs to the agmatine deiminase family
JJQ57_RS26660	COG2957	Belongs to the agmatine deiminase family
JJQ57_RS26665	COG0583	DNA-binding transcription factor activity
JJQ57_RS26680	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
JJQ57_RS26705	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JJQ57_RS26715	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS26720	COG0367	asparagine synthase
JJQ57_RS26730	COG2211	Major facilitator Superfamily
JJQ57_RS26780	COG1335	isochorismatase
JJQ57_RS26785	COG0583	DNA-binding transcription factor activity
JJQ57_RS26795	COG0791	NLP P60 protein
JJQ57_RS26800	COG0791	NLP P60 protein
JJQ57_RS26810	COG3829	transcription factor binding
JJQ57_RS26825	COG2818	Glycosylase
JJQ57_RS26850	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JJQ57_RS26855	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS26865	COG0625	glutathione transferase activity
JJQ57_RS26885	COG5002	protein histidine kinase activity
JJQ57_RS26885	COG5001	Diguanylate cyclase
JJQ57_RS26885	COG3447	MASE1 domain protein
JJQ57_RS26905	COG4459	periplasmic nitrate reductase
JJQ57_RS26910	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
JJQ57_RS26910	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JJQ57_RS26915	COG3062	negative regulation of establishment of protein localization
JJQ57_RS26925	COG3043	anaerobic respiration
JJQ57_RS26930	COG3005	denitrification pathway
JJQ57_RS26935	COG2951	lytic endotransglycosylase activity
JJQ57_RS26940	COG0861	Integral membrane protein TerC family
JJQ57_RS26945	COG0753	catalase activity
JJQ57_RS26955	COG2197	response regulator
JJQ57_RS27000	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS27010	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JJQ57_RS27025	COG2255	four-way junction helicase activity
JJQ57_RS27050	COG1804	L-carnitine dehydratase bile acid-inducible protein F
JJQ57_RS27075	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JJQ57_RS27095	COG1607	acyl-coa hydrolase
JJQ57_RS27120	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JJQ57_RS27130	COG4536	flavin adenine dinucleotide binding
JJQ57_RS27135	COG0477	Major facilitator Superfamily
JJQ57_RS27175	COG2188	Transcriptional regulator
JJQ57_RS27180	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
JJQ57_RS27185	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JJQ57_RS27190	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JJQ57_RS27190	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
JJQ57_RS27235	COG0590	tRNA wobble adenosine to inosine editing
JJQ57_RS27240	COG2132	Multicopper oxidase
JJQ57_RS27280	COG0583	DNA-binding transcription factor activity
JJQ57_RS27290	COG0583	DNA-binding transcription factor activity
JJQ57_RS27295	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
JJQ57_RS27305	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
JJQ57_RS27320	COG1335	isochorismatase
JJQ57_RS27330	COG2847	Copper chaperone PCu(A)C
JJQ57_RS27340	COG0739	heme binding
JJQ57_RS27380	COG0667	Aldo Keto reductase
JJQ57_RS27395	COG0436	Aminotransferase
JJQ57_RS27465	COG0316	Belongs to the HesB IscA family
JJQ57_RS27485	COG1045	serine acetyltransferase
JJQ57_RS27500	COG3134	Outer membrane lipoprotein
JJQ57_RS27515	COG1862	Preprotein translocase
JJQ57_RS27535	COG2200	EAL domain
JJQ57_RS27545	COG0795	lipopolysaccharide-transporting ATPase activity
JJQ57_RS27550	COG0795	lipopolysaccharide-transporting ATPase activity
JJQ57_RS27595	COG4120	Belongs to the binding-protein-dependent transport system permease family
JJQ57_RS27600	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JJQ57_RS27605	COG0490	domain, Protein
JJQ57_RS27605	COG0471	metal ion transport
JJQ57_RS27625	COG0640	Transcriptional regulator
JJQ57_RS27640	COG0583	DNA-binding transcription factor activity
JJQ57_RS27705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS27715	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS27740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS27745	COG4771	TonB-dependent receptor
JJQ57_RS27760	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS27765	COG2181	nitrate reductase activity
JJQ57_RS27770	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JJQ57_RS27775	COG1140	nitrate reductase beta subunit
JJQ57_RS27780	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JJQ57_RS27785	COG2223	nitrite transmembrane transporter activity
JJQ57_RS27795	COG3850	Histidine kinase
JJQ57_RS27800	COG2197	response regulator
JJQ57_RS27815	COG2226	methyltransferase
JJQ57_RS27820	COG0300	oxidoreductase activity
JJQ57_RS27870	COG1566	PFAM secretion protein HlyD family protein
JJQ57_RS27890	COG0583	DNA-binding transcription factor activity
JJQ57_RS27900	COG0697	spore germination
JJQ57_RS27910	COG1595	DNA-templated transcription, initiation
JJQ57_RS27915	COG3712	iron ion homeostasis
JJQ57_RS27920	COG4772	TonB-dependent receptor
JJQ57_RS27970	COG3154	lipid carrier protein
JJQ57_RS27975	COG0826	peptidase U32
JJQ57_RS27980	COG0826	peptidase U32
JJQ57_RS27985	COG0303	'Molybdopterin
JJQ57_RS27990	COG0521	Mo-molybdopterin cofactor biosynthetic process
JJQ57_RS28000	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JJQ57_RS28025	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JJQ57_RS28050	COG0318	PFAM AMP-dependent synthetase and ligase
JJQ57_RS28055	COG0183	Belongs to the thiolase family
JJQ57_RS28065	COG2207	Transcriptional regulator
JJQ57_RS28075	COG1294	oxidase, subunit
JJQ57_RS28080	COG1271	oxidase subunit
JJQ57_RS28095	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JJQ57_RS28100	COG1297	OPT oligopeptide transporter protein
JJQ57_RS28105	COG2175	clavaminate synthase activity
JJQ57_RS28110	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JJQ57_RS28120	COG4521	taurine ABC transporter
JJQ57_RS28140	COG1946	Acyl-CoA thioesterase
JJQ57_RS28160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JJQ57_RS28160	COG2205	protein histidine kinase activity
JJQ57_RS28165	COG2199	diguanylate cyclase activity
JJQ57_RS28165	COG2200	EAL domain
JJQ57_RS28165	COG2202	Pas domain
JJQ57_RS28170	COG2197	response regulator
JJQ57_RS28180	COG0513	Belongs to the DEAD box helicase family
JJQ57_RS28190	COG3416	Protein conserved in bacteria
JJQ57_RS28235	COG1643	Atp-dependent helicase
JJQ57_RS28245	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JJQ57_RS28280	COG0653	protein targeting
JJQ57_RS28285	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JJQ57_RS28295	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS28305	COG0784	Response regulator, receiver
JJQ57_RS28305	COG2198	Histidine kinase
JJQ57_RS28305	COG2205	protein histidine kinase activity
JJQ57_RS28310	COG0351	phosphomethylpyrimidine kinase
JJQ57_RS28340	COG1702	phosphate starvation-inducible protein PhoH
JJQ57_RS28350	COG4535	Mg2 and Co2 transporter CorC
JJQ57_RS28360	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JJQ57_RS28395	COG2951	lytic endotransglycosylase activity
JJQ57_RS28425	COG1686	Belongs to the peptidase S11 family
JJQ57_RS28435	COG2951	lytic endotransglycosylase activity
JJQ57_RS28440	COG0772	Belongs to the SEDS family
JJQ57_RS28445	COG0768	penicillin binding
JJQ57_RS28485	COG0586	Pfam SNARE associated Golgi protein
JJQ57_RS28495	COG1346	cytolysis
JJQ57_RS28515	COG0702	epimerase
JJQ57_RS28530	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JJQ57_RS28535	COG3284	Transcriptional regulator
JJQ57_RS28545	COG0531	amino acid
JJQ57_RS28550	COG4303	Ethanolamine ammonia lyase large subunit
JJQ57_RS28560	COG0456	acetyltransferase
JJQ57_RS28575	COG0586	Pfam SNARE associated Golgi protein
JJQ57_RS28580	COG3228	Belongs to the MtfA family
JJQ57_RS28590	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS28610	COG5002	protein histidine kinase activity
JJQ57_RS28615	COG1131	(ABC) transporter
JJQ57_RS28635	COG4948	Mandelate Racemase Muconate Lactonizing
JJQ57_RS28645	COG0142	geranyltranstransferase activity
JJQ57_RS28670	COG3577	Aspartyl protease
JJQ57_RS28680	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JJQ57_RS28685	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JJQ57_RS28710	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JJQ57_RS28710	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JJQ57_RS28725	COG2264	protein methyltransferase activity
JJQ57_RS28730	COG3118	belongs to the thioredoxin family
JJQ57_RS28760	COG3047	cAMP biosynthetic process
JJQ57_RS28770	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JJQ57_RS28790	COG0531	amino acid
JJQ57_RS28830	COG2197	response regulator
JJQ57_RS28850	COG3188	usher protein
JJQ57_RS28855	COG3121	Chaperone
JJQ57_RS28870	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JJQ57_RS28875	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS28905	COG3415	Transposase
JJQ57_RS28905	COG2801	Transposase and inactivated derivatives
JJQ57_RS28945	COG2271	Major facilitator Superfamily
JJQ57_RS28950	COG1063	alcohol dehydrogenase
JJQ57_RS28955	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS28975	COG0583	DNA-binding transcription factor activity
JJQ57_RS29020	COG1611	Belongs to the LOG family
JJQ57_RS29060	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS29065	COG3384	dioxygenase
JJQ57_RS29075	COG2271	Major facilitator Superfamily
JJQ57_RS29080	COG3971	2-oxopent-4-enoate hydratase activity
JJQ57_RS29095	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JJQ57_RS29105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JJQ57_RS29110	COG3278	Belongs to the heme-copper respiratory oxidase family
JJQ57_RS29120	COG1846	Transcriptional regulator
JJQ57_RS29125	COG2814	Major facilitator Superfamily
JJQ57_RS29155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS29180	COG3284	Transcriptional regulator
JJQ57_RS29190	COG3199	ATP-NAD kinase
JJQ57_RS29195	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JJQ57_RS29200	COG0022	dehydrogenase e1 component
JJQ57_RS29210	COG1063	alcohol dehydrogenase
JJQ57_RS29215	COG4991	sh3 domain protein
JJQ57_RS29220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JJQ57_RS29225	COG1629	transport
JJQ57_RS29225	COG4774	siderophore transport
JJQ57_RS29235	COG1120	ATPase activity
JJQ57_RS29240	COG4592	Periplasmic binding protein
JJQ57_RS29245	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JJQ57_RS29250	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JJQ57_RS29255	COG0154	amidase activity
JJQ57_RS29285	COG1959	2 iron, 2 sulfur cluster binding
JJQ57_RS29290	COG0492	ferredoxin-NADP+ reductase activity
JJQ57_RS29295	COG0693	protein deglycase activity
JJQ57_RS29305	COG0251	oxidation-reduction process
JJQ57_RS29320	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JJQ57_RS29330	COG2226	methyltransferase
JJQ57_RS29375	COG2271	Major facilitator Superfamily
JJQ57_RS29380	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JJQ57_RS29385	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS29395	COG4566	intracellular signal transduction
JJQ57_RS29400	COG4191	Histidine kinase
JJQ57_RS29410	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS29415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JJQ57_RS29435	COG2706	6-phosphogluconolactonase activity
JJQ57_RS29445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JJQ57_RS29450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JJQ57_RS29540	COG2226	methyltransferase
JJQ57_RS29540	COG3433	isochorismatase activity
JJQ57_RS29540	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JJQ57_RS29545	COG2226	methyltransferase
JJQ57_RS29545	COG3433	isochorismatase activity
JJQ57_RS29545	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JJQ57_RS29555	COG1021	2,3-dihydroxybenzoate-AMP ligase
JJQ57_RS29580	COG2814	Major facilitator Superfamily
JJQ57_RS29705	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JJQ57_RS29870	COG0739	heme binding
JJQ57_RS29900	COG1981	membrane
JJQ57_RS29925	COG0537	adenosine 5'-monophosphoramidase activity
JJQ57_RS29940	COG1765	OsmC-like protein
JJQ57_RS29975	COG3179	chitinase
JJQ57_RS30060	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JJQ57_RS30085	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JJQ57_RS30095	COG1176	ABC-type spermidine putrescine transport system, permease component I
JJQ57_RS30105	COG3842	ATPase activity
JJQ57_RS30115	COG2197	response regulator
JJQ57_RS30130	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
JJQ57_RS30180	COG2766	serine protein kinase
JJQ57_RS30190	COG2719	SpoVR family
JJQ57_RS30210	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JJQ57_RS30310	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JJQ57_RS30315	COG4977	sequence-specific DNA binding
JJQ57_RS30315	COG1917	Cupin 2, conserved barrel domain protein
JJQ57_RS30320	COG3152	Membrane
JJQ57_RS30325	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JJQ57_RS30330	COG1451	nucleotide metabolic process
JJQ57_RS30335	COG2081	HI0933 family
JJQ57_RS30375	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JJQ57_RS30380	COG3622	Belongs to the hyi family
JJQ57_RS30390	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JJQ57_RS30395	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JJQ57_RS30450	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
JJQ57_RS30460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS30480	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
JJQ57_RS30490	COG2258	MOSC domain
JJQ57_RS30495	COG0583	DNA-binding transcription factor activity
JJQ57_RS30500	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JJQ57_RS30585	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JJQ57_RS30585	COG1648	precorrin-2 dehydrogenase activity
JJQ57_RS30595	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS30600	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS30605	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS30625	COG2226	methyltransferase
JJQ57_RS30625	COG1073	alpha beta
JJQ57_RS30645	COG1984	allophanate hydrolase subunit 2
JJQ57_RS30660	COG0511	ligase activity, forming carbon-carbon bonds
JJQ57_RS30680	COG1040	competence protein
JJQ57_RS30685	COG5544	Lipoprotein
JJQ57_RS30690	COG2005	Transcriptional regulator
JJQ57_RS30690	COG3585	molybdate ion transport
JJQ57_RS30725	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JJQ57_RS30745	COG1953	Uracil, thiamine, allantoin
JJQ57_RS30750	COG1309	transcriptional regulator
JJQ57_RS30760	COG0625	glutathione transferase activity
JJQ57_RS30765	COG1595	DNA-templated transcription, initiation
JJQ57_RS30770	COG3712	iron ion homeostasis
JJQ57_RS30775	COG4774	siderophore transport
JJQ57_RS30805	COG4452	Inner membrane protein CreD
JJQ57_RS30810	COG2205	protein histidine kinase activity
JJQ57_RS30815	COG0745	RESPONSE REGULATOR receiver
JJQ57_RS30825	COG0204	Acyl-transferase
JJQ57_RS30835	COG0542	response to heat
JJQ57_RS30840	COG0477	Major facilitator Superfamily
JJQ57_RS30845	COG4067	protein conserved in archaea
JJQ57_RS30845	COG0189	ligase activity
JJQ57_RS30855	COG0513	Belongs to the DEAD box helicase family
JJQ57_RS30860	COG1289	transmembrane transporter activity
JJQ57_RS30870	COG0330	HflC and HflK could
JJQ57_RS30880	COG0306	phosphate transporter
JJQ57_RS30890	COG0583	DNA-binding transcription factor activity
JJQ57_RS30895	COG1960	acyl-CoA dehydrogenase activity
JJQ57_RS30910	COG1953	Uracil, thiamine, allantoin
JJQ57_RS30920	COG0493	'glutamate synthase
JJQ57_RS30930	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JJQ57_RS30935	COG0402	S-adenosylhomocysteine deaminase activity
JJQ57_RS30940	COG1309	transcriptional regulator
JJQ57_RS30965	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JJQ57_RS30970	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JJQ57_RS30980	COG0513	Belongs to the DEAD box helicase family
JJQ57_RS31030	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JJQ57_RS31040	COG0583	DNA-binding transcription factor activity
JJQ57_RS31055	COG0210	DNA helicase
JJQ57_RS31060	COG0028	Belongs to the TPP enzyme family
JJQ57_RS31070	COG0427	acetyl-CoA hydrolase
JJQ57_RS31080	COG1396	sequence-specific DNA binding
JJQ57_RS31080	COG1917	Cupin 2, conserved barrel domain protein
JJQ57_RS31090	COG0251	oxidation-reduction process
JJQ57_RS31120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JJQ57_RS31125	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JJQ57_RS31130	COG2814	Major facilitator Superfamily
JJQ57_RS31135	COG1012	belongs to the aldehyde dehydrogenase family
JJQ57_RS31140	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JJQ57_RS31160	COG0747	negative chemotaxis
JJQ57_RS31170	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JJQ57_RS31210	COG3245	cytochrome
JJQ57_RS31230	COG0708	Exodeoxyribonuclease III
JJQ57_RS31245	COG1561	YicC-like family, N-terminal region
JJQ57_RS31260	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JJQ57_RS31280	COG2207	Transcriptional regulator
JJQ57_RS31280	COG4753	response regulator
JJQ57_RS31290	COG0583	DNA-binding transcription factor activity
JJQ57_RS31295	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JJQ57_RS31330	COG3193	protein, possibly involved in utilization of glycolate and propanediol
JJQ57_RS31335	COG0247	lactate metabolic process
JJQ57_RS31340	COG0277	FAD linked oxidase domain protein
JJQ57_RS31345	COG0277	FAD linked oxidase domain protein
JJQ57_RS31350	COG2186	Transcriptional regulator
JJQ57_RS31380	COG1253	flavin adenine dinucleotide binding
JJQ57_RS31385	COG0739	heme binding
JJQ57_RS31405	COG0573	inorganic phosphate transmembrane transporter activity
JJQ57_RS31450	COG0477	Major facilitator Superfamily
JJQ57_RS31455	COG1607	acyl-coa hydrolase
JJQ57_RS31475	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JJQ57_RS31480	COG4175	Glycine betaine
JJQ57_RS31485	COG4176	ABC-type proline glycine betaine transport system permease component
JJQ57_RS31495	COG1760	l-serine dehydratase
JJQ57_RS31510	COG0583	DNA-binding transcription factor activity
JJQ57_RS31520	COG0657	acetylesterase activity
JJQ57_RS31535	COG3246	L-lysine catabolic process to acetate
JJQ57_RS31590	COG1902	pentaerythritol trinitrate reductase activity
JJQ57_RS31590	COG0446	pyridine nucleotide-disulphide oxidoreductase
JJQ57_RS31595	COG2181	nitrate reductase activity
JJQ57_RS31595	COG0247	lactate metabolic process
JJQ57_RS31600	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JJQ57_RS31615	COG3655	Transcriptional regulator
JJQ57_RS31655	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JJQ57_RS31655	COG1017	nitric oxide dioxygenase activity
JJQ57_RS31740	COG0583	DNA-binding transcription factor activity
JJQ57_RS31750	COG2391	methyltransferase activity
JJQ57_RS31775	COG5016	pyruvate
JJQ57_RS31775	COG0511	ligase activity, forming carbon-carbon bonds
JJQ57_RS31780	COG0439	Biotin carboxylase
JJQ57_RS31785	COG0583	DNA-binding transcription factor activity
JJQ57_RS31800	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JJQ57_RS31805	COG0826	peptidase U32
JJQ57_RS31825	COG0210	DNA helicase
JJQ57_RS31835	COG0427	acetyl-CoA hydrolase
JJQ57_RS31850	COG0438	transferase activity, transferring glycosyl groups
JJQ57_RS31900	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
JJQ57_RS31905	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
JJQ57_RS31905	COG2755	lipolytic protein G-D-S-L family
JJQ57_RS31945	COG0679	Auxin Efflux Carrier
JJQ57_RS31955	COG2851	Citrate transporter
JJQ57_RS31960	COG0861	Integral membrane protein TerC family
JJQ57_RS31965	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JJQ57_RS31970	COG1690	Belongs to the RtcB family
JJQ57_RS32005	COG0700	Nucleoside recognition
JJQ57_RS32010	COG1301	dicarboxylic acid transport
JJQ57_RS32030	COG5002	protein histidine kinase activity
JJQ57_RS32035	COG3023	N-Acetylmuramoyl-L-alanine amidase
JJQ57_RS32040	COG2095	MarC family integral membrane protein
JJQ57_RS32065	COG3245	cytochrome
JJQ57_RS32100	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
JJQ57_RS32105	COG0735	belongs to the Fur family
JJQ57_RS32115	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JJQ57_RS32130	COG2011	ABC-type metal ion transport system permease component
JJQ57_RS32160	COG0531	amino acid
JJQ57_RS32170	COG4191	Histidine kinase
JJQ57_RS32200	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JJQ57_RS32200	COG4651	solute:proton antiporter activity
JJQ57_RS32205	COG1607	acyl-coa hydrolase
JJQ57_RS32215	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS32220	COG0174	glutamine synthetase
JJQ57_RS32225	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JJQ57_RS32230	COG1028	Short-chain dehydrogenase reductase Sdr
JJQ57_RS32255	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JJQ57_RS32255	COG4651	solute:proton antiporter activity
JJQ57_RS32260	COG0477	Major facilitator Superfamily
JJQ57_RS32270	COG0523	cobalamin synthesis protein
JJQ57_RS32315	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JJQ57_RS32335	COG2358	TRAP transporter, solute receptor (TAXI family
JJQ57_RS32340	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JJQ57_RS32395	COG1349	DNA-binding transcription factor activity
JJQ57_RS32455	COG1475	DNA binding
JJQ57_RS32460	COG1192	Involved in chromosome partitioning