locus-tag	class	description
D3C65_RS00035	COG2010	Cytochrome c
D3C65_RS00050	COG2818	Glycosylase
D3C65_RS00065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
D3C65_RS00080	COG0569	domain protein
D3C65_RS00100	COG1652	LysM domain
D3C65_RS00105	COG0758	DNA mediated transformation
D3C65_RS00135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS00155	COG3119	arylsulfatase activity
D3C65_RS00160	COG0583	DNA-binding transcription factor activity
D3C65_RS00195	COG3360	Dodecin
D3C65_RS00210	COG3210	domain, Protein
D3C65_RS00255	COG3174	membrane
D3C65_RS00295	COG0367	asparagine synthase
D3C65_RS00320	COG0583	DNA-binding transcription factor activity
D3C65_RS00335	COG1764	response to oxidative stress
D3C65_RS00370	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
D3C65_RS00375	COG0339	signal peptide processing
D3C65_RS00380	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
D3C65_RS00395	COG1262	PFAM Formylglycine-generating sulfatase enzyme
D3C65_RS00410	COG2815	serine threonine protein kinase
D3C65_RS00410	COG0515	serine threonine protein kinase
D3C65_RS00415	COG0631	protein serine/threonine phosphatase activity
D3C65_RS00430	COG1360	Flagellar Motor Protein
D3C65_RS00555	COG0659	secondary active sulfate transmembrane transporter activity
D3C65_RS00570	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
D3C65_RS00575	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
D3C65_RS00580	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
D3C65_RS00620	COG2153	protein acetylation
D3C65_RS00660	COG0583	DNA-binding transcription factor activity
D3C65_RS00685	COG2824	Alkylphosphonate utilization operon protein PhnA
D3C65_RS00715	COG0402	S-adenosylhomocysteine deaminase activity
D3C65_RS00725	COG3845	ABC transporter
D3C65_RS00730	COG4603	Belongs to the binding-protein-dependent transport system permease family
D3C65_RS00735	COG1079	Belongs to the binding-protein-dependent transport system permease family
D3C65_RS00810	COG0583	DNA-binding transcription factor activity
D3C65_RS00815	COG3485	protocatechuate 3,4-dioxygenase
D3C65_RS00820	COG3485	protocatechuate 3,4-dioxygenase
D3C65_RS00830	COG1414	Transcriptional regulator
D3C65_RS00845	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS00850	COG0583	DNA-binding transcription factor activity
D3C65_RS00885	COG2233	PERMEase
D3C65_RS00890	COG1309	transcriptional regulator
D3C65_RS00925	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
D3C65_RS00940	COG0835	chemotaxis
D3C65_RS00945	COG0643	Histidine kinase
D3C65_RS00945	COG2198	Histidine kinase
D3C65_RS00950	COG0745	RESPONSE REGULATOR receiver
D3C65_RS00960	COG0583	DNA-binding transcription factor activity
D3C65_RS00965	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS00975	COG1116	anion transmembrane transporter activity
D3C65_RS00980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS00985	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS01030	COG2175	clavaminate synthase activity
D3C65_RS01075	COG0154	amidase activity
D3C65_RS01085	COG1177	transmembrane transport
D3C65_RS01090	COG1176	ABC-type spermidine putrescine transport system, permease component I
D3C65_RS01100	COG0583	DNA-binding transcription factor activity
D3C65_RS01135	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
D3C65_RS01165	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS01170	COG1113	amino acid transport
D3C65_RS01185	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D3C65_RS01190	COG0235	Class ii aldolase
D3C65_RS01195	COG1396	sequence-specific DNA binding
D3C65_RS01200	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
D3C65_RS01205	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
D3C65_RS01215	COG0477	Major facilitator Superfamily
D3C65_RS01225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
D3C65_RS01230	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D3C65_RS01235	COG0583	DNA-binding transcription factor activity
D3C65_RS01255	COG0673	inositol 2-dehydrogenase activity
D3C65_RS01275	COG2271	Major facilitator Superfamily
D3C65_RS01285	COG1309	transcriptional regulator
D3C65_RS01290	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
D3C65_RS01300	COG0477	Major facilitator Superfamily
D3C65_RS01320	COG2239	Acts as a magnesium transporter
D3C65_RS01415	COG0745	RESPONSE REGULATOR receiver
D3C65_RS01425	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D3C65_RS01440	COG0583	DNA-binding transcription factor activity
D3C65_RS01445	COG2807	transmembrane transport
D3C65_RS01465	COG0501	Belongs to the peptidase M48B family
D3C65_RS01485	COG4208	sulfate ABC transporter
D3C65_RS01495	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
D3C65_RS01515	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D3C65_RS01530	COG2199	diguanylate cyclase activity
D3C65_RS01555	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
D3C65_RS01560	COG0174	glutamine synthetase
D3C65_RS01565	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
D3C65_RS01570	COG0174	glutamine synthetase
D3C65_RS01590	COG3842	ATPase activity
D3C65_RS01595	COG1176	ABC-type spermidine putrescine transport system, permease component I
D3C65_RS01600	COG1177	transmembrane transport
D3C65_RS01655	COG0765	amino acid transport
D3C65_RS01670	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D3C65_RS01675	COG0277	FAD linked oxidase domain protein
D3C65_RS01680	COG0179	Fumarylacetoacetate (FAA) hydrolase
D3C65_RS01690	COG3111	PFAM Bacterial OB fold (BOF) protein
D3C65_RS01700	COG0531	amino acid
D3C65_RS01705	COG2182	Extracellular solute-binding protein
D3C65_RS01710	COG1177	transmembrane transport
D3C65_RS01720	COG3842	ATPase activity
D3C65_RS01730	COG3204	pilus organization
D3C65_RS01735	COG2234	aminopeptidase activity
D3C65_RS01750	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
D3C65_RS01760	COG0702	epimerase
D3C65_RS01800	COG0730	response to heat
D3C65_RS01835	COG0584	glycerophosphoryl diester phosphodiesterase
D3C65_RS01855	COG0622	Phosphoesterase
D3C65_RS01860	COG2233	PERMEase
D3C65_RS01875	COG0693	protein deglycase activity
D3C65_RS01910	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
D3C65_RS01920	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
D3C65_RS01945	COG0429	hydrolase of the alpha beta-hydrolase fold
D3C65_RS01955	COG0742	ribosomal rna small subunit methyltransferase
D3C65_RS01960	COG0612	Peptidase, M16
D3C65_RS01965	COG0612	Peptidase, M16
D3C65_RS01970	COG0552	protein localization to endoplasmic reticulum
D3C65_RS01975	COG2884	Cell division ATP-binding protein ftsE
D3C65_RS01980	COG2177	Part of the ABC transporter FtsEX involved in
D3C65_RS02000	COG2363	Small membrane protein
D3C65_RS02035	COG0635	Involved in the biosynthesis of porphyrin-containing compound
D3C65_RS02050	COG2813	Specifically methylates the guanine in position
D3C65_RS02050	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
D3C65_RS02060	COG1160	GTP binding
D3C65_RS02065	COG1872	DUF167
D3C65_RS02110	COG0626	cystathionine gamma-synthase activity
D3C65_RS02175	COG0784	Response regulator, receiver
D3C65_RS02175	COG2198	Histidine kinase
D3C65_RS02175	COG0643	Histidine kinase
D3C65_RS02205	COG1385	rRNA (uridine-N3-)-methyltransferase activity
D3C65_RS02225	COG3038	cytochrome b561
D3C65_RS02255	COG0513	Belongs to the DEAD box helicase family
D3C65_RS02265	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
D3C65_RS02270	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D3C65_RS02295	COG1309	transcriptional regulator
D3C65_RS02300	COG0402	S-adenosylhomocysteine deaminase activity
D3C65_RS02305	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D3C65_RS02340	COG1953	Uracil, thiamine, allantoin
D3C65_RS02360	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS02365	COG0583	DNA-binding transcription factor activity
D3C65_RS02375	COG0306	phosphate transporter
D3C65_RS02385	COG0330	HflC and HflK could
D3C65_RS02395	COG1289	transmembrane transporter activity
D3C65_RS02400	COG0513	Belongs to the DEAD box helicase family
D3C65_RS02410	COG0189	ligase activity
D3C65_RS02410	COG4067	protein conserved in archaea
D3C65_RS02420	COG0477	Major facilitator Superfamily
D3C65_RS02430	COG0542	response to heat
D3C65_RS02440	COG0204	Acyl-transferase
D3C65_RS02450	COG0745	RESPONSE REGULATOR receiver
D3C65_RS02455	COG2205	protein histidine kinase activity
D3C65_RS02460	COG4452	Inner membrane protein CreD
D3C65_RS02490	COG4774	siderophore transport
D3C65_RS02495	COG3712	iron ion homeostasis
D3C65_RS02500	COG1595	DNA-templated transcription, initiation
D3C65_RS02505	COG0625	glutathione transferase activity
D3C65_RS02515	COG1309	transcriptional regulator
D3C65_RS02520	COG1953	Uracil, thiamine, allantoin
D3C65_RS02540	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
D3C65_RS02575	COG2005	Transcriptional regulator
D3C65_RS02575	COG3585	molybdate ion transport
D3C65_RS02580	COG5544	Lipoprotein
D3C65_RS02585	COG1040	competence protein
D3C65_RS02605	COG0511	ligase activity, forming carbon-carbon bonds
D3C65_RS02620	COG1984	allophanate hydrolase subunit 2
D3C65_RS02635	COG3121	Chaperone
D3C65_RS02650	COG2226	methyltransferase
D3C65_RS02650	COG1073	alpha beta
D3C65_RS02670	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS02675	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS02685	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS02695	COG1648	precorrin-2 dehydrogenase activity
D3C65_RS02695	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
D3C65_RS02785	COG0583	DNA-binding transcription factor activity
D3C65_RS02790	COG2258	MOSC domain
D3C65_RS02800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
D3C65_RS02825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS02835	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
D3C65_RS02890	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D3C65_RS02895	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
D3C65_RS02905	COG3622	Belongs to the hyi family
D3C65_RS02910	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D3C65_RS02950	COG2081	HI0933 family
D3C65_RS02955	COG1451	nucleotide metabolic process
D3C65_RS02965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D3C65_RS02970	COG3152	Membrane
D3C65_RS02975	COG1917	Cupin 2, conserved barrel domain protein
D3C65_RS02975	COG4977	sequence-specific DNA binding
D3C65_RS02980	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D3C65_RS03075	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
D3C65_RS03095	COG2719	SpoVR family
D3C65_RS03105	COG2766	serine protein kinase
D3C65_RS03160	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
D3C65_RS03175	COG2197	response regulator
D3C65_RS03185	COG3842	ATPase activity
D3C65_RS03195	COG1176	ABC-type spermidine putrescine transport system, permease component I
D3C65_RS03205	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
D3C65_RS03230	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D3C65_RS03315	COG3179	chitinase
D3C65_RS03435	COG1765	OsmC-like protein
D3C65_RS03450	COG0537	adenosine 5'-monophosphoramidase activity
D3C65_RS03460	COG0300	oxidoreductase activity
D3C65_RS03475	COG1981	membrane
D3C65_RS03505	COG0739	heme binding
D3C65_RS03670	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
D3C65_RS03795	COG2814	Major facilitator Superfamily
D3C65_RS03820	COG1021	2,3-dihydroxybenzoate-AMP ligase
D3C65_RS03830	COG3433	isochorismatase activity
D3C65_RS03830	COG2226	methyltransferase
D3C65_RS03830	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D3C65_RS03835	COG3433	isochorismatase activity
D3C65_RS03835	COG2226	methyltransferase
D3C65_RS03835	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D3C65_RS03845	COG2375	cellular response to nickel ion
D3C65_RS03845	COG1132	(ABC) transporter
D3C65_RS03930	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS03935	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS03945	COG2706	6-phosphogluconolactonase activity
D3C65_RS03965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D3C65_RS03970	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS03980	COG4191	Histidine kinase
D3C65_RS03985	COG4566	intracellular signal transduction
D3C65_RS03990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS03995	COG0765	amino acid transport
D3C65_RS04000	COG0765	amino acid transport
D3C65_RS04020	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS04025	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D3C65_RS04030	COG2271	Major facilitator Superfamily
D3C65_RS04080	COG2226	methyltransferase
D3C65_RS04090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS04105	COG0251	oxidation-reduction process
D3C65_RS04115	COG0693	protein deglycase activity
D3C65_RS04120	COG0492	ferredoxin-NADP+ reductase activity
D3C65_RS04125	COG1959	2 iron, 2 sulfur cluster binding
D3C65_RS04155	COG0154	amidase activity
D3C65_RS04160	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS04165	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D3C65_RS04170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D3C65_RS04175	COG4592	Periplasmic binding protein
D3C65_RS04180	COG1120	ATPase activity
D3C65_RS04190	COG4774	siderophore transport
D3C65_RS04190	COG1629	transport
D3C65_RS04195	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D3C65_RS04200	COG4991	sh3 domain protein
D3C65_RS04205	COG1063	alcohol dehydrogenase
D3C65_RS04215	COG0022	dehydrogenase e1 component
D3C65_RS04220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
D3C65_RS04225	COG3199	ATP-NAD kinase
D3C65_RS04235	COG3284	Transcriptional regulator
D3C65_RS04260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS04295	COG2814	Major facilitator Superfamily
D3C65_RS04300	COG1846	Transcriptional regulator
D3C65_RS04310	COG3278	Belongs to the heme-copper respiratory oxidase family
D3C65_RS04315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D3C65_RS04325	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D3C65_RS04340	COG3971	2-oxopent-4-enoate hydratase activity
D3C65_RS04345	COG2271	Major facilitator Superfamily
D3C65_RS04355	COG3384	dioxygenase
D3C65_RS04360	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS04400	COG1611	Belongs to the LOG family
D3C65_RS04460	COG2259	Doxx family
D3C65_RS04470	COG2205	protein histidine kinase activity
D3C65_RS04495	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS04500	COG1063	alcohol dehydrogenase
D3C65_RS04505	COG2271	Major facilitator Superfamily
D3C65_RS04540	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS04545	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
D3C65_RS04560	COG3121	Chaperone
D3C65_RS04565	COG3188	usher protein
D3C65_RS04570	COG3121	Chaperone
D3C65_RS04585	COG2197	response regulator
D3C65_RS04625	COG0531	amino acid
D3C65_RS04645	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D3C65_RS04655	COG3047	cAMP biosynthetic process
D3C65_RS04685	COG3118	belongs to the thioredoxin family
D3C65_RS04690	COG2264	protein methyltransferase activity
D3C65_RS04710	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D3C65_RS04710	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D3C65_RS04735	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
D3C65_RS04740	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
D3C65_RS04750	COG3577	Aspartyl protease
D3C65_RS04775	COG0142	geranyltranstransferase activity
D3C65_RS04785	COG4948	Mandelate Racemase Muconate Lactonizing
D3C65_RS04805	COG1131	(ABC) transporter
D3C65_RS04810	COG5002	protein histidine kinase activity
D3C65_RS04830	COG0745	RESPONSE REGULATOR receiver
D3C65_RS04840	COG3228	Belongs to the MtfA family
D3C65_RS04845	COG0586	Pfam SNARE associated Golgi protein
D3C65_RS04860	COG0456	acetyltransferase
D3C65_RS04870	COG4303	Ethanolamine ammonia lyase large subunit
D3C65_RS04875	COG0531	amino acid
D3C65_RS04885	COG3284	Transcriptional regulator
D3C65_RS04890	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
D3C65_RS04905	COG0702	epimerase
D3C65_RS04925	COG1346	cytolysis
D3C65_RS04935	COG0586	Pfam SNARE associated Golgi protein
D3C65_RS04975	COG0768	penicillin binding
D3C65_RS04980	COG0772	Belongs to the SEDS family
D3C65_RS04985	COG2951	lytic endotransglycosylase activity
D3C65_RS04995	COG1686	Belongs to the peptidase S11 family
D3C65_RS05030	COG2951	lytic endotransglycosylase activity
D3C65_RS05065	COG1434	Gram-negative-bacterium-type cell wall biogenesis
D3C65_RS05075	COG4535	Mg2 and Co2 transporter CorC
D3C65_RS05085	COG1702	phosphate starvation-inducible protein PhoH
D3C65_RS05115	COG0351	phosphomethylpyrimidine kinase
D3C65_RS05120	COG0784	Response regulator, receiver
D3C65_RS05120	COG2205	protein histidine kinase activity
D3C65_RS05120	COG2198	Histidine kinase
D3C65_RS05130	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS05140	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
D3C65_RS05180	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
D3C65_RS05190	COG1643	Atp-dependent helicase
D3C65_RS05235	COG3416	Protein conserved in bacteria
D3C65_RS05245	COG0513	Belongs to the DEAD box helicase family
D3C65_RS05260	COG2197	response regulator
D3C65_RS05265	COG2199	diguanylate cyclase activity
D3C65_RS05265	COG2202	Pas domain
D3C65_RS05265	COG2200	EAL domain
D3C65_RS05270	COG2205	protein histidine kinase activity
D3C65_RS05270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS05290	COG1946	Acyl-CoA thioesterase
D3C65_RS05310	COG4521	taurine ABC transporter
D3C65_RS05320	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS05325	COG2175	clavaminate synthase activity
D3C65_RS05330	COG1297	OPT oligopeptide transporter protein
D3C65_RS05335	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D3C65_RS05350	COG1271	oxidase subunit
D3C65_RS05355	COG1294	oxidase, subunit
D3C65_RS05365	COG2207	Transcriptional regulator
D3C65_RS05375	COG0183	Belongs to the thiolase family
D3C65_RS05380	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS05415	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
D3C65_RS05425	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
D3C65_RS05435	COG0521	Mo-molybdopterin cofactor biosynthetic process
D3C65_RS05440	COG0303	'Molybdopterin
D3C65_RS05445	COG0826	peptidase U32
D3C65_RS05450	COG0826	peptidase U32
D3C65_RS05455	COG3154	lipid carrier protein
D3C65_RS05505	COG4772	TonB-dependent receptor
D3C65_RS05510	COG3712	iron ion homeostasis
D3C65_RS05515	COG1595	DNA-templated transcription, initiation
D3C65_RS05525	COG0697	spore germination
D3C65_RS05535	COG0583	DNA-binding transcription factor activity
D3C65_RS05555	COG1566	PFAM secretion protein HlyD family protein
D3C65_RS05610	COG0300	oxidoreductase activity
D3C65_RS05615	COG2226	methyltransferase
D3C65_RS05630	COG2197	response regulator
D3C65_RS05635	COG3850	Histidine kinase
D3C65_RS05645	COG2223	nitrite transmembrane transporter activity
D3C65_RS05650	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
D3C65_RS05655	COG1140	nitrate reductase beta subunit
D3C65_RS05660	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
D3C65_RS05665	COG2181	nitrate reductase activity
D3C65_RS05670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS05690	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
D3C65_RS05705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS05735	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS05745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS05810	COG0583	DNA-binding transcription factor activity
D3C65_RS05845	COG0490	domain, Protein
D3C65_RS05845	COG0471	metal ion transport
D3C65_RS05850	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
D3C65_RS05855	COG4120	Belongs to the binding-protein-dependent transport system permease family
D3C65_RS05915	COG0795	lipopolysaccharide-transporting ATPase activity
D3C65_RS05920	COG0795	lipopolysaccharide-transporting ATPase activity
D3C65_RS05930	COG2200	EAL domain
D3C65_RS05950	COG1862	Preprotein translocase
D3C65_RS05965	COG3134	Outer membrane lipoprotein
D3C65_RS05980	COG1045	serine acetyltransferase
D3C65_RS06070	COG0436	Aminotransferase
D3C65_RS06085	COG0667	Aldo Keto reductase
D3C65_RS06125	COG0739	heme binding
D3C65_RS06135	COG2847	Copper chaperone PCu(A)C
D3C65_RS06145	COG1335	isochorismatase
D3C65_RS06160	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
D3C65_RS06170	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
D3C65_RS06175	COG0583	DNA-binding transcription factor activity
D3C65_RS06225	COG2132	Multicopper oxidase
D3C65_RS06230	COG0590	tRNA wobble adenosine to inosine editing
D3C65_RS06275	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
D3C65_RS06275	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
D3C65_RS06280	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
D3C65_RS06285	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
D3C65_RS06290	COG2188	Transcriptional regulator
D3C65_RS06330	COG0477	Major facilitator Superfamily
D3C65_RS06340	COG4536	flavin adenine dinucleotide binding
D3C65_RS06350	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
D3C65_RS06375	COG1607	acyl-coa hydrolase
D3C65_RS06395	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
D3C65_RS06420	COG1804	L-carnitine dehydratase bile acid-inducible protein F
D3C65_RS06445	COG2255	four-way junction helicase activity
D3C65_RS06460	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
D3C65_RS06470	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS06515	COG2197	response regulator
D3C65_RS06520	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
D3C65_RS06540	COG0477	Major facilitator Superfamily
D3C65_RS06575	COG5001	Diguanylate cyclase
D3C65_RS06575	COG4251	negative regulation of phosphorylation
D3C65_RS06575	COG3706	GGDEF domain
D3C65_RS06575	COG2203	Gaf domain
D3C65_RS06610	COG3064	Membrane
D3C65_RS06610	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
D3C65_RS06610	COG1073	alpha beta
D3C65_RS06625	COG2885	chlorophyll binding
D3C65_RS06640	COG0789	Transcriptional regulator
D3C65_RS06660	COG1214	PFAM Peptidase M22, glycoprotease
D3C65_RS06670	COG1801	Protein of unknown function DUF72
D3C65_RS06675	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
D3C65_RS06700	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS06745	COG2166	iron-sulfur cluster assembly
D3C65_RS06765	COG1393	Belongs to the ArsC family
D3C65_RS06785	COG0025	NhaP-type Na H and K H
D3C65_RS06790	COG0436	Aminotransferase
D3C65_RS06800	COG0024	Methionine aminopeptidase
D3C65_RS06880	COG1115	amino acid carrier protein
D3C65_RS06930	COG2391	methyltransferase activity
D3C65_RS06935	COG0583	DNA-binding transcription factor activity
D3C65_RS06940	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
D3C65_RS06945	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
D3C65_RS07000	COG1546	Belongs to the CinA family
D3C65_RS07020	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
D3C65_RS07025	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
D3C65_RS07030	COG3530	Putative quorum-sensing-regulated virulence factor
D3C65_RS07045	COG1177	transmembrane transport
D3C65_RS07050	COG1176	ABC-type spermidine putrescine transport system, permease component I
D3C65_RS07060	COG3148	PFAM DTW domain containing protein
D3C65_RS07080	COG0069	glutamate synthase activity
D3C65_RS07105	COG0531	amino acid
D3C65_RS07110	COG2169	Transcriptional regulator
D3C65_RS07110	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D3C65_RS07115	COG0477	Major facilitator Superfamily
D3C65_RS07125	COG0583	DNA-binding transcription factor activity
D3C65_RS07130	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS07135	COG1804	L-carnitine dehydratase bile acid-inducible protein F
D3C65_RS07140	COG1024	Enoyl-CoA hydratase
D3C65_RS07145	COG1250	3-hydroxyacyl-CoA dehydrogenase
D3C65_RS07150	COG0183	Belongs to the thiolase family
D3C65_RS07160	COG0583	DNA-binding transcription factor activity
D3C65_RS07200	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
D3C65_RS07250	COG2814	Major facilitator Superfamily
D3C65_RS07290	COG0583	DNA-binding transcription factor activity
D3C65_RS07300	COG0084	hydrolase, TatD family'
D3C65_RS07305	COG1609	Transcriptional regulator
D3C65_RS07315	COG1105	Belongs to the carbohydrate kinase PfkB family
D3C65_RS07320	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D3C65_RS07320	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D3C65_RS07320	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
D3C65_RS07435	COG3842	ATPase activity
D3C65_RS07455	COG0243	molybdopterin cofactor binding
D3C65_RS07460	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
D3C65_RS07465	COG2223	nitrite transmembrane transporter activity
D3C65_RS07480	COG0450	alkyl hydroperoxide reductase
D3C65_RS07510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS07545	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
D3C65_RS07550	COG2264	protein methyltransferase activity
D3C65_RS07565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS07585	COG1414	Transcriptional regulator
D3C65_RS07595	COG0028	Belongs to the TPP enzyme family
D3C65_RS07605	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS07650	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
D3C65_RS07720	COG0489	protein tyrosine kinase activity
D3C65_RS07770	COG0791	NLP P60 protein
D3C65_RS07790	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
D3C65_RS07795	COG0668	transmembrane transport
D3C65_RS07800	COG0477	Major facilitator Superfamily
D3C65_RS07805	COG0513	Belongs to the DEAD box helicase family
D3C65_RS07825	COG0784	Response regulator, receiver
D3C65_RS07825	COG2205	protein histidine kinase activity
D3C65_RS07825	COG5002	protein histidine kinase activity
D3C65_RS07830	COG1363	Peptidase, m42
D3C65_RS07835	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
D3C65_RS07835	COG0189	ligase activity
D3C65_RS07840	COG0367	asparagine synthase
D3C65_RS07870	COG0183	Belongs to the thiolase family
D3C65_RS07890	COG0450	alkyl hydroperoxide reductase
D3C65_RS07895	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS07900	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS07910	COG0431	NADPH-dependent FMN reductase
D3C65_RS07915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS07925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS07950	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
D3C65_RS07980	COG0583	DNA-binding transcription factor activity
D3C65_RS07985	COG1380	Effector of murein hydrolase LrgA
D3C65_RS07990	COG1346	cytolysis
D3C65_RS08010	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS08015	COG1024	Enoyl-CoA hydratase
D3C65_RS08025	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
D3C65_RS08110	COG1629	transport
D3C65_RS08165	COG0583	DNA-binding transcription factor activity
D3C65_RS08240	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
D3C65_RS08245	COG3639	organic phosphonate transmembrane transporter activity
D3C65_RS08250	COG2188	Transcriptional regulator
D3C65_RS08255	COG3624	Phosphonate C-P lyase system protein PhnG
D3C65_RS08265	COG3626	phosphonate metabolism
D3C65_RS08270	COG3627	carbon phosphorus lyase activity
D3C65_RS08275	COG4107	phosphonate C-P lyase system protein PhnK
D3C65_RS08280	COG4778	phosphonate C-P lyase system protein PhnL
D3C65_RS08285	COG3454	Phosphonate metabolism
D3C65_RS08295	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
D3C65_RS08370	COG0697	spore germination
D3C65_RS08395	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
D3C65_RS08415	COG0784	Response regulator, receiver
D3C65_RS08415	COG0835	chemotaxis
D3C65_RS08430	COG0745	RESPONSE REGULATOR receiver
D3C65_RS08440	COG0514	ATP-dependent DNA helicase (RecQ)
D3C65_RS08445	COG5001	Diguanylate cyclase
D3C65_RS08445	COG4251	negative regulation of phosphorylation
D3C65_RS08445	COG3706	GGDEF domain
D3C65_RS08445	COG2203	Gaf domain
D3C65_RS08470	COG1752	Esterase of the alpha-beta hydrolase superfamily
D3C65_RS08510	COG2124	cytochrome p450
D3C65_RS08515	COG4221	oxidoreductase activity
D3C65_RS08560	COG0583	DNA-binding transcription factor activity
D3C65_RS08590	COG3639	organic phosphonate transmembrane transporter activity
D3C65_RS08600	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
D3C65_RS08605	COG2084	Dehydrogenase
D3C65_RS08620	COG0589	response to stress
D3C65_RS08660	COG2814	Major facilitator Superfamily
D3C65_RS08665	COG2030	dehydratase
D3C65_RS08670	COG2267	carboxylic ester hydrolase activity
D3C65_RS08675	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS08680	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS08695	COG1643	Atp-dependent helicase
D3C65_RS08705	COG0537	adenosine 5'-monophosphoramidase activity
D3C65_RS08760	COG1595	DNA-templated transcription, initiation
D3C65_RS08835	COG1201	RNA secondary structure unwinding
D3C65_RS08840	COG2205	protein histidine kinase activity
D3C65_RS08840	COG0784	Response regulator, receiver
D3C65_RS08855	COG4772	TonB-dependent receptor
D3C65_RS08870	COG2076	Multidrug Resistance protein
D3C65_RS08875	COG0385	Bile acid
D3C65_RS08925	COG2200	EAL domain
D3C65_RS08935	COG0604	alcohol dehydrogenase
D3C65_RS08935	COG3321	synthase
D3C65_RS08940	COG0560	Phosphoserine phosphatase
D3C65_RS08955	COG1176	ABC-type spermidine putrescine transport system, permease component I
D3C65_RS08985	COG0564	pseudouridine synthase activity
D3C65_RS08995	COG2894	cell division
D3C65_RS09005	COG1560	Kdo2-lipid A biosynthetic process
D3C65_RS09020	COG2853	Lipoprotein
D3C65_RS09040	COG3162	membrane
D3C65_RS09045	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D3C65_RS09075	COG1132	(ABC) transporter
D3C65_RS09085	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
D3C65_RS09110	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D3C65_RS09125	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
D3C65_RS09125	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS09155	COG1127	ABC transporter
D3C65_RS09160	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
D3C65_RS09165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D3C65_RS09170	COG0727	PFAM Uncharacterised protein family (UPF0153)
D3C65_RS09175	COG0778	Nitroreductase
D3C65_RS09195	COG0745	RESPONSE REGULATOR receiver
D3C65_RS09205	COG2350	Protein conserved in bacteria
D3C65_RS09215	COG0613	PHP domain protein
D3C65_RS09220	COG0009	L-threonylcarbamoyladenylate synthase
D3C65_RS09225	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
D3C65_RS09230	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
D3C65_RS09280	COG1175	transmembrane transport
D3C65_RS09285	COG0395	ABC-type sugar transport system, permease component
D3C65_RS09290	COG3842	ATPase activity
D3C65_RS09305	COG0676	glucose-6-phosphate 1-epimerase activity
D3C65_RS09355	COG0786	glutamate:sodium symporter activity
D3C65_RS09370	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS09385	COG0402	S-adenosylhomocysteine deaminase activity
D3C65_RS09415	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
D3C65_RS09455	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
D3C65_RS09455	COG2755	lipolytic protein G-D-S-L family
D3C65_RS09490	COG0518	GMP synthase (glutamine-hydrolyzing) activity
D3C65_RS09490	COG0519	Catalyzes the synthesis of GMP from XMP
D3C65_RS09515	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
D3C65_RS09560	COG0583	DNA-binding transcription factor activity
D3C65_RS09595	COG0596	Alpha beta hydrolase
D3C65_RS09600	COG0800	Aldolase
D3C65_RS09615	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS09635	COG0583	DNA-binding transcription factor activity
D3C65_RS09640	COG0251	oxidation-reduction process
D3C65_RS09660	COG2226	methyltransferase
D3C65_RS09700	COG0285	dihydrofolate synthase activity
D3C65_RS09705	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
D3C65_RS09710	COG1286	toxin biosynthetic process
D3C65_RS09810	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS09810	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS09835	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
D3C65_RS09845	COG3139	Protein of unknown function (DUF1315)
D3C65_RS09855	COG0308	aminopeptidase N
D3C65_RS09890	COG0745	RESPONSE REGULATOR receiver
D3C65_RS09925	COG0714	Associated with various cellular activities
D3C65_RS09945	COG1335	isochorismatase
D3C65_RS09955	COG2342	PFAM TM1410 hypothetical-related protein
D3C65_RS09980	COG0297	glycogen (starch) synthase activity
D3C65_RS10030	COG3130	regulation of translation
D3C65_RS10045	COG2027	D-alanyl-D-alanine carboxypeptidase
D3C65_RS10050	COG3171	Protein conserved in bacteria
D3C65_RS10055	COG2197	response regulator
D3C65_RS10060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS10060	COG2205	protein histidine kinase activity
D3C65_RS10090	COG0004	ammonium transporteR
D3C65_RS10100	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D3C65_RS10110	COG0625	glutathione transferase activity
D3C65_RS10115	COG1309	transcriptional regulator
D3C65_RS10145	COG0521	Mo-molybdopterin cofactor biosynthetic process
D3C65_RS10165	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
D3C65_RS10170	COG1070	Carbohydrate kinase
D3C65_RS10190	COG0741	lytic transglycosylase activity
D3C65_RS10195	COG0488	(ABC) transporter
D3C65_RS10205	COG0589	response to stress
D3C65_RS10285	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
D3C65_RS10295	COG1113	amino acid transport
D3C65_RS10330	COG1477	protein flavinylation
D3C65_RS10345	COG0584	glycerophosphoryl diester phosphodiesterase
D3C65_RS10360	COG4591	ABC-type transport system involved in lipoprotein release permease component
D3C65_RS10380	COG2333	competence protein COMEC
D3C65_RS10380	COG0658	competence protein
D3C65_RS10385	COG0811	peptide transport
D3C65_RS10390	COG0848	biopolymer transport protein
D3C65_RS10410	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
D3C65_RS10420	COG1530	ribonuclease E activity
D3C65_RS10435	COG0546	phosphoglycolate phosphatase activity
D3C65_RS10440	COG0616	signal peptide processing
D3C65_RS10440	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
D3C65_RS10450	COG1399	metal-binding, possibly nucleic acid-binding protein
D3C65_RS10480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
D3C65_RS10490	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
D3C65_RS10510	COG0084	hydrolase, TatD family'
D3C65_RS10595	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
D3C65_RS10610	COG0183	Belongs to the thiolase family
D3C65_RS10625	COG2233	PERMEase
D3C65_RS10635	COG3038	cytochrome b561
D3C65_RS10650	COG2814	Major facilitator Superfamily
D3C65_RS10655	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS10660	COG1309	transcriptional regulator
D3C65_RS10695	COG4160	amino acid transport
D3C65_RS10700	COG4215	(ABC) transporter
D3C65_RS10705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS10710	COG1473	amidohydrolase
D3C65_RS10715	COG0583	DNA-binding transcription factor activity
D3C65_RS10720	COG0840	transmembrane signaling receptor activity
D3C65_RS10750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D3C65_RS10760	COG1120	ATPase activity
D3C65_RS10790	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D3C65_RS10820	COG2885	chlorophyll binding
D3C65_RS10820	COG3047	cAMP biosynthetic process
D3C65_RS10825	COG2197	response regulator
D3C65_RS10835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D3C65_RS10840	COG1595	DNA-templated transcription, initiation
D3C65_RS10855	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS10870	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
D3C65_RS10875	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS10880	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
D3C65_RS10895	COG1309	transcriptional regulator
D3C65_RS10925	COG0583	DNA-binding transcription factor activity
D3C65_RS10935	COG0583	DNA-binding transcription factor activity
D3C65_RS10945	COG0714	Associated with various cellular activities
D3C65_RS10995	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
D3C65_RS11000	COG2259	Doxx family
D3C65_RS11015	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
D3C65_RS11030	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
D3C65_RS11035	COG4181	ATPase activity
D3C65_RS11075	COG1764	response to oxidative stress
D3C65_RS11080	COG1846	Transcriptional regulator
D3C65_RS11085	COG0583	DNA-binding transcription factor activity
D3C65_RS11095	COG0583	DNA-binding transcription factor activity
D3C65_RS11105	COG3214	Protein conserved in bacteria
D3C65_RS11110	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
D3C65_RS11120	COG1024	Enoyl-CoA hydratase
D3C65_RS11130	COG3384	dioxygenase
D3C65_RS11170	COG2866	Carboxypeptidase
D3C65_RS11185	COG0436	Aminotransferase
D3C65_RS11195	COG0386	Belongs to the glutathione peroxidase family
D3C65_RS11200	COG1846	Transcriptional regulator
D3C65_RS11205	COG5002	protein histidine kinase activity
D3C65_RS11205	COG0784	Response regulator, receiver
D3C65_RS11205	COG2205	protein histidine kinase activity
D3C65_RS11210	COG2255	four-way junction helicase activity
D3C65_RS11215	COG1956	GAF domain-containing protein
D3C65_RS11220	COG0625	glutathione transferase activity
D3C65_RS11245	COG2200	EAL domain
D3C65_RS11270	COG0625	glutathione transferase activity
D3C65_RS11275	COG1131	(ABC) transporter
D3C65_RS11280	COG0842	Transport permease protein
D3C65_RS11325	COG2188	Transcriptional regulator
D3C65_RS11335	COG2853	Lipoprotein
D3C65_RS11345	COG0745	RESPONSE REGULATOR receiver
D3C65_RS11410	COG3655	Transcriptional regulator
D3C65_RS11450	COG2116	formate transmembrane transporter activity
D3C65_RS11455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS11520	COG1024	Enoyl-CoA hydratase
D3C65_RS11520	COG1250	3-hydroxyacyl-CoA dehydrogenase
D3C65_RS11530	COG2837	iron assimilation
D3C65_RS11615	COG1238	metal cluster binding
D3C65_RS11625	COG1295	ribonuclease BN
D3C65_RS11655	COG0024	Methionine aminopeptidase
D3C65_RS11755	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
D3C65_RS11780	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
D3C65_RS11780	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
D3C65_RS11790	COG0542	response to heat
D3C65_RS11825	COG0789	Transcriptional regulator
D3C65_RS11835	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS11835	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS11840	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
D3C65_RS11845	COG0243	molybdopterin cofactor binding
D3C65_RS11870	COG1280	lysine exporter protein (LysE YggA)
D3C65_RS11885	COG0542	response to heat
D3C65_RS11960	COG1607	acyl-coa hydrolase
D3C65_RS11965	COG1959	2 iron, 2 sulfur cluster binding
D3C65_RS11980	COG2819	hydrolase of the alpha beta superfamily
D3C65_RS12035	COG4106	trans-aconitate 2-methyltransferase activity
D3C65_RS12045	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D3C65_RS12050	COG1459	type II secretion system
D3C65_RS12060	COG2165	general secretion pathway protein
D3C65_RS12100	COG0720	synthase
D3C65_RS12105	COG3604	Transcriptional regulator
D3C65_RS12165	COG0840	transmembrane signaling receptor activity
D3C65_RS12170	COG2056	Na+-H+ antiporter family
D3C65_RS12185	COG2226	methyltransferase
D3C65_RS12285	COG2153	protein acetylation
D3C65_RS12290	COG2850	peptidyl-arginine hydroxylation
D3C65_RS12330	COG1278	Cold shock
D3C65_RS12340	COG0542	response to heat
D3C65_RS12345	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
D3C65_RS12360	COG0492	ferredoxin-NADP+ reductase activity
D3C65_RS12375	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
D3C65_RS12390	COG0435	Glutathione S-transferase
D3C65_RS12395	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
D3C65_RS12400	COG2920	part of a sulfur-relay system
D3C65_RS12440	COG0583	DNA-binding transcription factor activity
D3C65_RS12445	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D3C65_RS12450	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS12460	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS12465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS12475	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS12490	COG2197	response regulator
D3C65_RS12495	COG4771	TonB-dependent receptor
D3C65_RS12550	COG0784	Response regulator, receiver
D3C65_RS12550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS12550	COG2198	Histidine kinase
D3C65_RS12550	COG2205	protein histidine kinase activity
D3C65_RS12570	COG2249	NAD(P)H dehydrogenase (quinone) activity
D3C65_RS12585	COG1522	sequence-specific DNA binding
D3C65_RS12615	COG4191	Histidine kinase
D3C65_RS12640	COG5001	Diguanylate cyclase
D3C65_RS12640	COG2203	Gaf domain
D3C65_RS12640	COG3706	GGDEF domain
D3C65_RS12640	COG4251	negative regulation of phosphorylation
D3C65_RS12665	COG0659	secondary active sulfate transmembrane transporter activity
D3C65_RS12700	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS12710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D3C65_RS12720	COG0183	Belongs to the thiolase family
D3C65_RS12725	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS12775	COG0729	surface antigen
D3C65_RS12785	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
D3C65_RS12790	COG2267	carboxylic ester hydrolase activity
D3C65_RS12795	COG0671	phosphoesterase, PA-phosphatase related
D3C65_RS12795	COG2453	phosphatase
D3C65_RS12810	COG4589	Belongs to the CDS family
D3C65_RS12815	COG0667	Aldo Keto reductase
D3C65_RS12825	COG1115	amino acid carrier protein
D3C65_RS12835	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
D3C65_RS12865	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS12870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS12875	COG1538	Outer membrane efflux protein
D3C65_RS12935	COG0543	2 iron, 2 sulfur cluster binding
D3C65_RS12935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D3C65_RS12940	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
D3C65_RS12945	COG4638	Rieske (2fe-2S)
D3C65_RS12970	COG4948	Mandelate Racemase Muconate Lactonizing
D3C65_RS12980	COG3485	protocatechuate 3,4-dioxygenase
D3C65_RS13015	COG2807	transmembrane transport
D3C65_RS13020	COG0590	tRNA wobble adenosine to inosine editing
D3C65_RS13035	COG2318	DinB family
D3C65_RS13100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D3C65_RS13105	COG2863	cytochrome
D3C65_RS13110	COG3258	Cytochrome c
D3C65_RS13115	COG0642	Histidine kinase
D3C65_RS13150	COG0625	glutathione transferase activity
D3C65_RS13170	COG0583	DNA-binding transcription factor activity
D3C65_RS13175	COG1595	DNA-templated transcription, initiation
D3C65_RS13180	COG3712	iron ion homeostasis
D3C65_RS13205	COG3210	domain, Protein
D3C65_RS13250	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D3C65_RS13260	COG2382	esterase
D3C65_RS13280	COG0583	DNA-binding transcription factor activity
D3C65_RS13305	COG1760	l-serine dehydratase
D3C65_RS13310	COG0404	The glycine cleavage system catalyzes the degradation of glycine
D3C65_RS13345	COG2217	Heavy metal translocating P-type atpase
D3C65_RS13360	COG0583	DNA-binding transcription factor activity
D3C65_RS13380	COG1566	PFAM secretion protein HlyD family protein
D3C65_RS13435	COG1335	isochorismatase
D3C65_RS13445	COG0583	DNA-binding transcription factor activity
D3C65_RS13485	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D3C65_RS13490	COG1121	(ABC) transporter
D3C65_RS13580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS13605	COG0735	belongs to the Fur family
D3C65_RS13615	COG1304	FMN binding
D3C65_RS13645	COG4566	intracellular signal transduction
D3C65_RS13735	COG3829	transcription factor binding
D3C65_RS13760	COG3829	transcription factor binding
D3C65_RS13765	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
D3C65_RS13770	COG0584	glycerophosphoryl diester phosphodiesterase
D3C65_RS13775	COG2011	ABC-type metal ion transport system permease component
D3C65_RS13785	COG1464	Belongs to the NlpA lipoprotein family
D3C65_RS13810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D3C65_RS13815	COG1070	Carbohydrate kinase
D3C65_RS13820	COG0246	Mannitol dehydrogenase
D3C65_RS13835	COG1175	transmembrane transport
D3C65_RS13855	COG4771	TonB-dependent receptor
D3C65_RS13870	COG1917	Cupin 2, conserved barrel domain protein
D3C65_RS13870	COG4977	sequence-specific DNA binding
D3C65_RS13885	COG1116	anion transmembrane transporter activity
D3C65_RS13890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D3C65_RS13895	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS13915	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS13930	COG3265	gluconokinase activity
D3C65_RS13935	COG1609	Transcriptional regulator
D3C65_RS13950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS13955	COG0583	DNA-binding transcription factor activity
D3C65_RS13975	COG1396	sequence-specific DNA binding
D3C65_RS13985	COG2175	clavaminate synthase activity
D3C65_RS13995	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
D3C65_RS14025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D3C65_RS14025	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D3C65_RS14035	COG3469	chitinase activity
D3C65_RS14040	COG2188	Transcriptional regulator
D3C65_RS14045	COG1053	succinate dehydrogenase
D3C65_RS14060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D3C65_RS14095	COG4772	TonB-dependent receptor
D3C65_RS14140	COG0431	NADPH-dependent FMN reductase
D3C65_RS14145	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
D3C65_RS14155	COG0640	Transcriptional regulator
D3C65_RS14160	COG2207	Transcriptional regulator
D3C65_RS14165	COG1064	alcohol dehydrogenase
D3C65_RS14190	COG1309	transcriptional regulator
D3C65_RS14200	COG2329	Antibiotic biosynthesis monooxygenase
D3C65_RS14235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D3C65_RS14245	COG1609	Transcriptional regulator
D3C65_RS14280	COG0252	asparaginase activity
D3C65_RS14285	COG1115	amino acid carrier protein
D3C65_RS14330	COG1053	succinate dehydrogenase
D3C65_RS14340	COG0728	peptidoglycan biosynthetic process
D3C65_RS14405	COG2258	MOSC domain
D3C65_RS14470	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS14480	COG4948	Mandelate Racemase Muconate Lactonizing
D3C65_RS14485	COG2271	Major facilitator Superfamily
D3C65_RS14500	COG3618	amidohydrolase
D3C65_RS14505	COG2271	Major facilitator Superfamily
D3C65_RS14540	COG0765	amino acid transport
D3C65_RS14545	COG0765	amino acid transport
D3C65_RS14560	COG2084	Dehydrogenase
D3C65_RS14570	COG2130	NADP-dependent
D3C65_RS14575	COG1309	transcriptional regulator
D3C65_RS14595	COG0366	Alpha amylase catalytic
D3C65_RS14600	COG0517	IMP dehydrogenase activity
D3C65_RS14620	COG1063	alcohol dehydrogenase
D3C65_RS14630	COG3546	catalase activity
D3C65_RS14635	COG3685	Protein conserved in bacteria
D3C65_RS14665	COG2890	protein-(glutamine-N5) methyltransferase activity
D3C65_RS14680	COG0784	Response regulator, receiver
D3C65_RS14680	COG4191	Histidine kinase
D3C65_RS14710	COG1363	Peptidase, m42
D3C65_RS14755	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
D3C65_RS14800	COG3568	Endonuclease Exonuclease Phosphatase
D3C65_RS14805	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D3C65_RS14810	COG0392	lysyltransferase activity
D3C65_RS14820	COG0366	Alpha amylase catalytic
D3C65_RS14840	COG1285	pathogenesis
D3C65_RS14865	COG0058	SHG alpha-glucan phosphorylase activity
D3C65_RS14880	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS14885	COG1546	Belongs to the CinA family
D3C65_RS14915	COG2323	membrane
D3C65_RS14935	COG3121	Chaperone
D3C65_RS14945	COG3188	usher protein
D3C65_RS14950	COG3121	Chaperone
D3C65_RS14960	COG3969	phosphoadenosine phosphosulfate
D3C65_RS14970	COG1475	DNA binding
D3C65_RS14975	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS14980	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
D3C65_RS14985	COG0583	DNA-binding transcription factor activity
D3C65_RS15005	COG1063	alcohol dehydrogenase
D3C65_RS15020	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D3C65_RS15020	COG2169	Transcriptional regulator
D3C65_RS15040	COG0583	DNA-binding transcription factor activity
D3C65_RS15045	COG2814	Major facilitator Superfamily
D3C65_RS15065	COG1984	allophanate hydrolase subunit 2
D3C65_RS15075	COG0028	Belongs to the TPP enzyme family
D3C65_RS15085	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
D3C65_RS15090	COG1045	serine acetyltransferase
D3C65_RS15095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D3C65_RS15115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D3C65_RS15120	COG0300	oxidoreductase activity
D3C65_RS15155	COG2814	Major facilitator Superfamily
D3C65_RS15165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
D3C65_RS15185	COG0596	Alpha beta hydrolase
D3C65_RS15190	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
D3C65_RS15195	COG0367	asparagine synthase
D3C65_RS15205	COG1522	sequence-specific DNA binding
D3C65_RS15225	COG1113	amino acid transport
D3C65_RS15235	COG2010	Cytochrome c
D3C65_RS15240	COG2010	Cytochrome c
D3C65_RS15265	COG3153	acetyltransferase
D3C65_RS15265	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
D3C65_RS15270	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D3C65_RS15275	COG5001	Diguanylate cyclase
D3C65_RS15285	COG4206	TonB-dependent receptor
D3C65_RS15295	COG2192	nodulation
D3C65_RS15300	COG2814	Major facilitator Superfamily
D3C65_RS15335	COG1104	cysteine desulfurase activity
D3C65_RS15340	COG4172	Belongs to the ABC transporter superfamily
D3C65_RS15345	COG4239	(ABC) transporter, permease
D3C65_RS15350	COG4174	ABC transporter (Permease)
D3C65_RS15360	COG4771	TonB-dependent receptor
D3C65_RS15375	COG0583	DNA-binding transcription factor activity
D3C65_RS15395	COG1595	DNA-templated transcription, initiation
D3C65_RS15410	COG2207	Transcriptional regulator
D3C65_RS15435	COG0564	pseudouridine synthase activity
D3C65_RS15450	COG0531	amino acid
D3C65_RS15455	COG0174	glutamine synthetase
D3C65_RS15480	COG0028	Belongs to the TPP enzyme family
D3C65_RS15495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D3C65_RS15515	COG1522	sequence-specific DNA binding
D3C65_RS15555	COG1309	transcriptional regulator
D3C65_RS15560	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS15565	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS15575	COG3204	pilus organization
D3C65_RS15580	COG0789	Transcriptional regulator
D3C65_RS15585	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS15590	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
D3C65_RS15620	COG0179	Fumarylacetoacetate (FAA) hydrolase
D3C65_RS15630	COG2271	Major facilitator Superfamily
D3C65_RS15635	COG3290	protein histidine kinase activity
D3C65_RS15635	COG3829	transcription factor binding
D3C65_RS15640	COG2610	gluconate transmembrane transporter activity
D3C65_RS15645	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS15650	COG2031	fatty acid transporter
D3C65_RS15665	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
D3C65_RS15670	COG0583	DNA-binding transcription factor activity
D3C65_RS15675	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D3C65_RS15680	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS15700	COG2205	protein histidine kinase activity
D3C65_RS15765	COG3851	Histidine kinase
D3C65_RS15780	COG0784	Response regulator, receiver
D3C65_RS15780	COG2205	protein histidine kinase activity
D3C65_RS15800	COG2194	sulfuric ester hydrolase activity
D3C65_RS15845	COG0488	(ABC) transporter
D3C65_RS15860	COG0583	DNA-binding transcription factor activity
D3C65_RS15865	COG1278	Cold shock
D3C65_RS15915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D3C65_RS15920	COG1609	Transcriptional regulator
D3C65_RS15925	COG1172	Belongs to the binding-protein-dependent transport system permease family
D3C65_RS15930	COG1129	ABC transporter
D3C65_RS15940	COG2204	response regulator
D3C65_RS15960	COG2010	Cytochrome c
D3C65_RS15965	COG0753	catalase activity
D3C65_RS15995	COG1529	Aldehyde oxidase and xanthine dehydrogenase
D3C65_RS16000	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
D3C65_RS16005	COG2080	2 iron, 2 sulfur cluster binding
D3C65_RS16030	COG1944	ATP diphosphatase activity
D3C65_RS16050	COG4771	TonB-dependent receptor
D3C65_RS16055	COG0275	rRNA processing
D3C65_RS16060	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
D3C65_RS16060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D3C65_RS16075	COG0579	oxidoreductase
D3C65_RS16110	COG1595	DNA-templated transcription, initiation
D3C65_RS16115	COG3712	iron ion homeostasis
D3C65_RS16135	COG2814	Major facilitator Superfamily
D3C65_RS16185	COG2197	response regulator
D3C65_RS16210	COG2366	antibiotic biosynthetic process
D3C65_RS16225	COG0625	glutathione transferase activity
D3C65_RS16245	COG0417	DNA replication proofreading
D3C65_RS16290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS16360	COG1309	transcriptional regulator
D3C65_RS16380	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
D3C65_RS16385	COG0583	DNA-binding transcription factor activity
D3C65_RS16395	COG2354	Protein conserved in bacteria
D3C65_RS16400	COG3278	Belongs to the heme-copper respiratory oxidase family
D3C65_RS16410	COG2239	Acts as a magnesium transporter
D3C65_RS16425	COG4251	negative regulation of phosphorylation
D3C65_RS16425	COG5001	Diguanylate cyclase
D3C65_RS16425	COG3706	GGDEF domain
D3C65_RS16425	COG2203	Gaf domain
D3C65_RS16435	COG4977	sequence-specific DNA binding
D3C65_RS16440	COG3813	Protein conserved in bacteria
D3C65_RS16505	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D3C65_RS16530	COG0604	alcohol dehydrogenase
D3C65_RS16535	COG0616	signal peptide processing
D3C65_RS16555	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS16560	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS16565	COG0583	DNA-binding transcription factor activity
D3C65_RS16590	COG1024	Enoyl-CoA hydratase
D3C65_RS16600	COG0531	amino acid
D3C65_RS16615	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
D3C65_RS16635	COG0741	lytic transglycosylase activity
D3C65_RS16635	COG1388	LysM domain
D3C65_RS16640	COG4166	transmembrane transport
D3C65_RS16645	COG4166	transmembrane transport
D3C65_RS16650	COG4174	ABC transporter (Permease)
D3C65_RS16655	COG4239	(ABC) transporter, permease
D3C65_RS16660	COG4172	Belongs to the ABC transporter superfamily
D3C65_RS16670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS16685	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
D3C65_RS16710	COG0745	RESPONSE REGULATOR receiver
D3C65_RS16715	COG2205	protein histidine kinase activity
D3C65_RS16720	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
D3C65_RS16755	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
D3C65_RS16775	COG0589	response to stress
D3C65_RS16800	COG3707	response regulator
D3C65_RS16810	COG2223	nitrite transmembrane transporter activity
D3C65_RS16815	COG0515	serine threonine protein kinase
D3C65_RS16820	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D3C65_RS16825	COG2146	nitrite reductase [NAD(P)H] activity
D3C65_RS16830	COG0243	molybdopterin cofactor binding
D3C65_RS16850	COG0668	transmembrane transport
D3C65_RS16890	COG0189	ligase activity
D3C65_RS16890	COG4067	protein conserved in archaea
D3C65_RS16935	COG2909	trisaccharide binding
D3C65_RS16940	COG2909	trisaccharide binding
D3C65_RS16975	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
D3C65_RS17030	COG0519	Catalyzes the synthesis of GMP from XMP
D3C65_RS17045	COG0667	Aldo Keto reductase
D3C65_RS17060	COG0183	Belongs to the thiolase family
D3C65_RS17080	COG1305	Transglutaminase-like
D3C65_RS17090	COG2308	Evidence 4 Homologs of previously reported genes of
D3C65_RS17100	COG0505	Belongs to the CarA family
D3C65_RS17120	COG1317	bacterial-type flagellum organization
D3C65_RS17230	COG4789	Type iii secretion
D3C65_RS17280	COG4790	Type iii secretion
D3C65_RS17285	COG4794	Type iii secretion
D3C65_RS17290	COG4791	protein targeting
D3C65_RS17295	COG4792	protein secretion
D3C65_RS17375	COG2840	Smr protein MutS2
D3C65_RS17395	COG2815	serine threonine protein kinase
D3C65_RS17395	COG0515	serine threonine protein kinase
D3C65_RS17435	COG2204	response regulator
D3C65_RS17480	COG0625	glutathione transferase activity
D3C65_RS17485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D3C65_RS17500	COG3135	benzoate transporter
D3C65_RS17510	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS17515	COG2130	NADP-dependent
D3C65_RS17530	COG0840	transmembrane signaling receptor activity
D3C65_RS17540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
D3C65_RS17580	COG0745	RESPONSE REGULATOR receiver
D3C65_RS17585	COG2205	protein histidine kinase activity
D3C65_RS17610	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS17620	COG1024	Enoyl-CoA hydratase
D3C65_RS17625	COG1250	3-hydroxyacyl-CoA dehydrogenase
D3C65_RS17630	COG2186	Transcriptional regulator
D3C65_RS17635	COG2807	transmembrane transport
D3C65_RS17640	COG0628	permease
D3C65_RS17650	COG0625	glutathione transferase activity
D3C65_RS17680	COG1022	Amp-dependent synthetase and ligase
D3C65_RS17710	COG5002	protein histidine kinase activity
D3C65_RS17710	COG0784	Response regulator, receiver
D3C65_RS17710	COG2205	protein histidine kinase activity
D3C65_RS17750	COG1846	Transcriptional regulator
D3C65_RS17755	COG2080	2 iron, 2 sulfur cluster binding
D3C65_RS17760	COG2010	Cytochrome c
D3C65_RS17760	COG1529	Aldehyde oxidase and xanthine dehydrogenase
D3C65_RS17765	COG2010	Cytochrome c
D3C65_RS17765	COG1529	Aldehyde oxidase and xanthine dehydrogenase
D3C65_RS17770	COG2207	Transcriptional regulator
D3C65_RS17845	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
D3C65_RS17850	COG1053	succinate dehydrogenase
D3C65_RS17855	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
D3C65_RS17860	COG2009	succinate dehydrogenase
D3C65_RS17890	COG2084	Dehydrogenase
D3C65_RS17905	COG3738	Protein conserved in bacteria
D3C65_RS17935	COG0251	oxidation-reduction process
D3C65_RS17940	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS17950	COG0174	glutamine synthetase
D3C65_RS17955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS17975	COG0840	transmembrane signaling receptor activity
D3C65_RS17990	COG3278	Belongs to the heme-copper respiratory oxidase family
D3C65_RS18005	COG2010	Cytochrome c
D3C65_RS18010	COG3278	Belongs to the heme-copper respiratory oxidase family
D3C65_RS18025	COG2010	Cytochrome c
D3C65_RS18035	COG0348	domain, Protein
D3C65_RS18045	COG2217	Heavy metal translocating P-type atpase
D3C65_RS18085	COG2076	Multidrug Resistance protein
D3C65_RS18115	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS18130	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
D3C65_RS18160	COG1196	nuclear chromosome segregation
D3C65_RS18190	COG0402	S-adenosylhomocysteine deaminase activity
D3C65_RS18205	COG2252	PERMEase
D3C65_RS18265	COG2233	PERMEase
D3C65_RS18280	COG1309	transcriptional regulator
D3C65_RS18290	COG3960	tartronate-semialdehyde synthase activity
D3C65_RS18295	COG3622	Belongs to the hyi family
D3C65_RS18300	COG2084	Dehydrogenase
D3C65_RS18310	COG0469	pyruvate kinase activity
D3C65_RS18315	COG4413	Urea transporter
D3C65_RS18320	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D3C65_RS18335	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
D3C65_RS18345	COG3192	ethanolamine utilization protein
D3C65_RS18360	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS18365	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
D3C65_RS18440	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
D3C65_RS18455	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS18460	COG1496	oxidoreductase activity
D3C65_RS18485	COG0835	chemotaxis
D3C65_RS18495	COG1192	Involved in chromosome partitioning
D3C65_RS18500	COG1360	Flagellar Motor Protein
D3C65_RS18505	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
D3C65_RS18515	COG2198	Histidine kinase
D3C65_RS18515	COG0784	Response regulator, receiver
D3C65_RS18515	COG0643	Histidine kinase
D3C65_RS18545	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
D3C65_RS18550	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
D3C65_RS18570	COG1987	bacterial-type flagellum assembly
D3C65_RS18610	COG2832	Protein of unknown function (DUF454)
D3C65_RS18625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS18630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS18640	COG5001	Diguanylate cyclase
D3C65_RS18640	COG3300	MHYT domain
D3C65_RS18675	COG0488	(ABC) transporter
D3C65_RS18730	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D3C65_RS18740	COG0583	DNA-binding transcription factor activity
D3C65_RS18755	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
D3C65_RS18770	COG3264	Mechanosensitive ion channel
D3C65_RS18770	COG1196	nuclear chromosome segregation
D3C65_RS18775	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
D3C65_RS18775	COG0116	Belongs to the methyltransferase superfamily
D3C65_RS18785	COG0210	DNA helicase
D3C65_RS18810	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
D3C65_RS18855	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS18860	COG0463	Glycosyl transferase, family 2
D3C65_RS18865	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS18890	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
D3C65_RS18900	COG1450	Type ii and iii secretion system protein
D3C65_RS18910	COG2207	Transcriptional regulator
D3C65_RS18915	COG4221	oxidoreductase activity
D3C65_RS18925	COG1247	-acetyltransferase
D3C65_RS18945	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
D3C65_RS18975	COG0384	phenazine biosynthesis protein PhzF
D3C65_RS19015	COG5006	permease, DMT superfamily
D3C65_RS19030	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
D3C65_RS19045	COG3795	YCII-related domain
D3C65_RS19055	COG2814	Major facilitator Superfamily
D3C65_RS19060	COG4941	Belongs to the sigma-70 factor family
D3C65_RS19070	COG3795	YCII-related domain
D3C65_RS19080	COG2197	response regulator
D3C65_RS19085	COG1982	Orn Lys Arg decarboxylase major
D3C65_RS19090	COG0189	ligase activity
D3C65_RS19095	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS19110	COG0765	amino acid transport
D3C65_RS19115	COG0765	amino acid transport
D3C65_RS19120	COG1126	abc transporter atp-binding protein
D3C65_RS19150	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS19170	COG1253	flavin adenine dinucleotide binding
D3C65_RS19175	COG0300	oxidoreductase activity
D3C65_RS19185	COG0583	DNA-binding transcription factor activity
D3C65_RS19190	COG1864	DNA RNA non-specific endonuclease
D3C65_RS19190	COG3591	Belongs to the peptidase S1B family
D3C65_RS19195	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
D3C65_RS19200	COG4319	ketosteroid isomerase
D3C65_RS19215	COG4774	siderophore transport
D3C65_RS19265	COG2814	Major facilitator Superfamily
D3C65_RS19285	COG0583	DNA-binding transcription factor activity
D3C65_RS19295	COG0121	glutamine amidotransferase
D3C65_RS19325	COG3712	iron ion homeostasis
D3C65_RS19330	COG1595	DNA-templated transcription, initiation
D3C65_RS19345	COG1230	cation diffusion facilitator family transporter
D3C65_RS19350	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D3C65_RS19410	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS19430	COG0406	alpha-ribazole phosphatase activity
D3C65_RS19460	COG0778	Nitroreductase
D3C65_RS19475	COG4206	TonB-dependent receptor
D3C65_RS19485	COG1802	Transcriptional regulator
D3C65_RS19495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS19530	COG0477	Major facilitator Superfamily
D3C65_RS19550	COG0765	amino acid transport
D3C65_RS19570	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D3C65_RS19575	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS19635	COG4191	Histidine kinase
D3C65_RS19635	COG0784	Response regulator, receiver
D3C65_RS19690	COG1289	transmembrane transporter activity
D3C65_RS19705	COG2207	Transcriptional regulator
D3C65_RS19725	COG2249	NAD(P)H dehydrogenase (quinone) activity
D3C65_RS19730	COG2249	NAD(P)H dehydrogenase (quinone) activity
D3C65_RS19740	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
D3C65_RS19765	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
D3C65_RS19775	COG0318	PFAM AMP-dependent synthetase and ligase
D3C65_RS19780	COG0367	asparagine synthase
D3C65_RS19790	COG2211	Major facilitator Superfamily
D3C65_RS19840	COG1335	isochorismatase
D3C65_RS19845	COG0583	DNA-binding transcription factor activity
D3C65_RS19855	COG0791	NLP P60 protein
D3C65_RS19860	COG0791	NLP P60 protein
D3C65_RS19870	COG3829	transcription factor binding
D3C65_RS19885	COG2818	Glycosylase
D3C65_RS19910	COG1804	L-carnitine dehydratase bile acid-inducible protein F
D3C65_RS19915	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS19925	COG0625	glutathione transferase activity
D3C65_RS19950	COG5002	protein histidine kinase activity
D3C65_RS19950	COG5001	Diguanylate cyclase
D3C65_RS19950	COG3447	MASE1 domain protein
D3C65_RS19970	COG4459	periplasmic nitrate reductase
D3C65_RS19975	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
D3C65_RS19975	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
D3C65_RS19980	COG3062	negative regulation of establishment of protein localization
D3C65_RS19990	COG3043	anaerobic respiration
D3C65_RS19995	COG3005	denitrification pathway
D3C65_RS20000	COG2951	lytic endotransglycosylase activity
D3C65_RS20005	COG0861	Integral membrane protein TerC family
D3C65_RS20030	COG2977	Belongs to the P-Pant transferase superfamily
D3C65_RS20035	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
D3C65_RS20050	COG2226	methyltransferase
D3C65_RS20065	COG2205	protein histidine kinase activity
D3C65_RS20070	COG0745	RESPONSE REGULATOR receiver
D3C65_RS20075	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D3C65_RS20075	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
D3C65_RS20080	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D3C65_RS20085	COG1943	Transposase
D3C65_RS20140	COG0531	amino acid
D3C65_RS20170	COG0583	DNA-binding transcription factor activity
D3C65_RS20175	COG3257	ureidoglycine aminohydrolase activity
D3C65_RS20190	COG3321	synthase
D3C65_RS20190	COG0604	alcohol dehydrogenase
D3C65_RS20190	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS20195	COG2197	response regulator
D3C65_RS20235	COG0583	DNA-binding transcription factor activity
D3C65_RS20240	COG0667	Aldo Keto reductase
D3C65_RS20270	COG0242	peptide deformylase activity
D3C65_RS20280	COG2199	diguanylate cyclase activity
D3C65_RS20285	COG2885	chlorophyll binding
D3C65_RS20315	COG1132	(ABC) transporter
D3C65_RS20330	COG4628	conserved protein (DUF2132)
D3C65_RS20335	COG2133	pyrroloquinoline quinone binding
D3C65_RS20350	COG2207	Transcriptional regulator
D3C65_RS20355	COG0477	Major facilitator Superfamily
D3C65_RS20370	COG2882	bacterial-type flagellum organization
D3C65_RS20430	COG1334	flagellar protein FlaG
D3C65_RS20490	COG4787	bacterial-type flagellum-dependent cell motility
D3C65_RS20500	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
D3C65_RS20510	COG1815	bacterial-type flagellum-dependent cell motility
D3C65_RS20560	COG0326	Molecular chaperone. Has ATPase activity
D3C65_RS20575	COG3189	MarR family transcriptional regulator
D3C65_RS20595	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D3C65_RS20610	COG2212	antiporter activity
D3C65_RS20615	COG1863	multisubunit Na H antiporter MnhE subunit
D3C65_RS20620	COG0651	ATP synthesis coupled electron transport
D3C65_RS20625	COG1006	Multisubunit Na H antiporter MnhC subunit
D3C65_RS20630	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
D3C65_RS20630	COG2111	Na H antiporter
D3C65_RS20635	COG3133	Outer membrane lipoprotein
D3C65_RS20645	COG1929	Belongs to the glycerate kinase type-1 family
D3C65_RS20650	COG2610	gluconate transmembrane transporter activity
D3C65_RS20655	COG3835	regulator
D3C65_RS20665	COG2885	chlorophyll binding
D3C65_RS20680	COG1199	ATP-dependent helicase activity
D3C65_RS20720	COG2860	membrane
D3C65_RS20735	COG0653	protein targeting
D3C65_RS20740	COG0625	glutathione transferase activity
D3C65_RS20765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS20770	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS20795	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS20800	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS20805	COG1024	Enoyl-CoA hydratase
D3C65_RS20810	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS20820	COG2814	Major facilitator Superfamily
D3C65_RS20825	COG2030	dehydratase
D3C65_RS20835	COG0183	Belongs to the thiolase family
D3C65_RS20865	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
D3C65_RS20870	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
D3C65_RS20885	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
D3C65_RS20895	COG0425	Belongs to the sulfur carrier protein TusA family
D3C65_RS20950	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D3C65_RS20955	COG3188	usher protein
D3C65_RS20975	COG1051	belongs to the nudix hydrolase family
D3C65_RS21060	COG0602	queuosine metabolic process
D3C65_RS21065	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
D3C65_RS21095	COG0824	Thioesterase
D3C65_RS21125	COG0783	Belongs to the Dps family
D3C65_RS21170	COG3118	belongs to the thioredoxin family
D3C65_RS21205	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
D3C65_RS21225	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
D3C65_RS21265	COG3122	Protein conserved in bacteria
D3C65_RS21275	COG3956	TIGRFAM MazG family protein
D3C65_RS21280	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D3C65_RS21310	COG2205	protein histidine kinase activity
D3C65_RS21310	COG5002	protein histidine kinase activity
D3C65_RS21310	COG0784	Response regulator, receiver
D3C65_RS21315	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D3C65_RS21365	COG3038	cytochrome b561
D3C65_RS21385	COG4807	Protein conserved in bacteria
D3C65_RS21395	COG2239	Acts as a magnesium transporter
D3C65_RS21465	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
D3C65_RS21560	COG2301	Belongs to the HpcH HpaI aldolase family
D3C65_RS21570	COG2079	MmgE PrpD family protein
D3C65_RS21580	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS21585	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
D3C65_RS21590	COG0583	DNA-binding transcription factor activity
D3C65_RS21595	COG0583	DNA-binding transcription factor activity
D3C65_RS21655	COG1113	amino acid transport
D3C65_RS21680	COG3321	synthase
D3C65_RS21680	COG0604	alcohol dehydrogenase
D3C65_RS21680	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS21690	COG5001	Diguanylate cyclase
D3C65_RS21690	COG5002	protein histidine kinase activity
D3C65_RS21710	COG0271	Belongs to the BolA IbaG family
D3C65_RS21750	COG0492	ferredoxin-NADP+ reductase activity
D3C65_RS21755	COG0450	alkyl hydroperoxide reductase
D3C65_RS21790	COG1307	EDD domain protein, DegV family
D3C65_RS21800	COG1309	transcriptional regulator
D3C65_RS21805	COG0386	Belongs to the glutathione peroxidase family
D3C65_RS21830	COG0204	Acyl-transferase
D3C65_RS21835	COG2885	chlorophyll binding
D3C65_RS21840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D3C65_RS21855	COG2267	carboxylic ester hydrolase activity
D3C65_RS21935	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
D3C65_RS21950	COG0546	phosphoglycolate phosphatase activity
D3C65_RS21965	COG3023	N-Acetylmuramoyl-L-alanine amidase
D3C65_RS21980	COG0656	L-ascorbic acid biosynthetic process
D3C65_RS22005	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
D3C65_RS22015	COG1802	Transcriptional regulator
D3C65_RS22025	COG0372	Belongs to the citrate synthase family
D3C65_RS22040	COG2079	MmgE PrpD family protein
D3C65_RS22055	COG1113	amino acid transport
D3C65_RS22085	COG0583	DNA-binding transcription factor activity
D3C65_RS22090	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D3C65_RS22100	COG4206	TonB-dependent receptor
D3C65_RS22110	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
D3C65_RS22175	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D3C65_RS22255	COG3180	Ammonia monooxygenase
D3C65_RS22265	COG2720	vancomycin resistance protein
D3C65_RS22280	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS22285	COG1024	Enoyl-CoA hydratase
D3C65_RS22305	COG2910	NAD(P)H-binding
D3C65_RS22310	COG2015	COG2015, Alkyl sulfatase and related hydrolases
D3C65_RS22390	COG4974	Belongs to the 'phage' integrase family
D3C65_RS22400	COG4128	Pfam Zonular occludens toxin
D3C65_RS22500	COG0583	DNA-binding transcription factor activity
D3C65_RS22515	COG0463	Glycosyl transferase, family 2
D3C65_RS22520	COG0154	amidase activity
D3C65_RS22540	COG0583	DNA-binding transcription factor activity
D3C65_RS22550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D3C65_RS22585	COG2831	hemolysin activation secretion protein
D3C65_RS22735	COG0420	3'-5' exonuclease activity
D3C65_RS22745	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
D3C65_RS22750	COG1074	ATP-dependent DNA helicase activity
D3C65_RS22755	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
D3C65_RS22760	COG0095	Lipoate-protein ligase
D3C65_RS22765	COG0697	spore germination
D3C65_RS22780	COG0840	transmembrane signaling receptor activity
D3C65_RS22790	COG0306	phosphate transporter
D3C65_RS22850	COG4964	Belongs to the GSP D family
D3C65_RS22870	COG0433	COG0433 Predicted ATPase
D3C65_RS22910	COG0788	formyltetrahydrofolate deformylase activity
D3C65_RS22920	COG2925	Exonuclease
D3C65_RS22950	COG0714	Associated with various cellular activities
D3C65_RS22980	COG0589	response to stress
D3C65_RS22990	COG1024	Enoyl-CoA hydratase
D3C65_RS23000	COG3706	GGDEF domain
D3C65_RS23020	COG0693	protein deglycase activity
D3C65_RS23035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D3C65_RS23050	COG0154	amidase activity
D3C65_RS23060	COG1473	amidohydrolase
D3C65_RS23075	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
D3C65_RS23080	COG0426	domain, Protein
D3C65_RS23080	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
D3C65_RS23100	COG0589	response to stress
D3C65_RS23115	COG2814	Major facilitator Superfamily
D3C65_RS23120	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS23135	COG1918	ferrous iron import across plasma membrane
D3C65_RS23150	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D3C65_RS23190	COG1704	LemA family
D3C65_RS23215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS23220	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS23235	COG3642	lipopolysaccharide core region biosynthetic process
D3C65_RS23245	COG2205	protein histidine kinase activity
D3C65_RS23250	COG0745	RESPONSE REGULATOR receiver
D3C65_RS23285	COG3030	protein affecting phage T7 exclusion by the F plasmid
D3C65_RS23295	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS23320	COG0668	transmembrane transport
D3C65_RS23330	COG0745	RESPONSE REGULATOR receiver
D3C65_RS23345	COG2096	Adenosyltransferase
D3C65_RS23350	COG0494	nUDIX hydrolase
D3C65_RS23375	COG0741	lytic transglycosylase activity
D3C65_RS23375	COG1196	nuclear chromosome segregation
D3C65_RS23375	COG0739	heme binding
D3C65_RS23420	COG0772	Belongs to the SEDS family
D3C65_RS23435	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
D3C65_RS23475	COG3107	peptidoglycan biosynthetic process
D3C65_RS23490	COG2823	Periplasmic or secreted lipoprotein
D3C65_RS23495	COG2969	positive regulation of protein catabolic process
D3C65_RS23500	COG0625	glutathione transferase activity
D3C65_RS23505	COG2857	Cytochrome c1
D3C65_RS23510	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
D3C65_RS23515	COG0723	plastoquinol--plastocyanin reductase activity
D3C65_RS23530	COG0667	Aldo Keto reductase
D3C65_RS23535	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS23550	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
D3C65_RS23560	COG2945	thiolester hydrolase activity
D3C65_RS23580	COG2951	lytic endotransglycosylase activity
D3C65_RS23590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D3C65_RS23630	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
D3C65_RS23635	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
D3C65_RS23640	COG1127	ABC transporter
D3C65_RS23650	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
D3C65_RS23665	COG1137	ATPase activity
D3C65_RS23720	COG0312	modulator of DNA gyrase
D3C65_RS23730	COG0312	modulator of DNA gyrase
D3C65_RS23735	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
D3C65_RS23745	COG1530	ribonuclease E activity
D3C65_RS23760	COG1792	Involved in formation and maintenance of cell shape
D3C65_RS23765	COG1077	Cell shape determining protein MreB Mrl
D3C65_RS23785	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
D3C65_RS23790	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D3C65_RS23795	COG4676	Protein conserved in bacteria
D3C65_RS23800	COG5445	Predicted secreted protein (DUF2300)
D3C65_RS23815	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
D3C65_RS23820	COG4676	Protein conserved in bacteria
D3C65_RS23825	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
D3C65_RS23840	COG0747	negative chemotaxis
D3C65_RS23845	COG0747	negative chemotaxis
D3C65_RS23860	COG0747	negative chemotaxis
D3C65_RS23875	COG0747	negative chemotaxis
D3C65_RS23880	COG0601	transmembrane transport
D3C65_RS23885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D3C65_RS23890	COG0444	Belongs to the ABC transporter superfamily
D3C65_RS23895	COG4608	Belongs to the ABC transporter superfamily
D3C65_RS23910	COG1984	allophanate hydrolase subunit 2
D3C65_RS23930	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D3C65_RS23935	COG4774	siderophore transport
D3C65_RS23950	COG2194	sulfuric ester hydrolase activity
D3C65_RS23960	COG0019	diaminopimelate decarboxylase activity
D3C65_RS24060	COG1252	NADH dehydrogenase
D3C65_RS24065	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
D3C65_RS24080	COG1192	Involved in chromosome partitioning
D3C65_RS24225	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
D3C65_RS24240	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
D3C65_RS24265	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D3C65_RS24405	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
D3C65_RS24465	COG4974	Belongs to the 'phage' integrase family
D3C65_RS24480	COG2135	peptidase activity
D3C65_RS24530	COG1074	ATP-dependent DNA helicase activity
D3C65_RS24650	COG3609	addiction module antidote protein, CC2985 family
D3C65_RS24670	COG3328	transposase activity
D3C65_RS24680	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
D3C65_RS24745	COG4969	Belongs to the N-Me-Phe pilin family
D3C65_RS24785	COG1047	Peptidyl-prolyl cis-trans
D3C65_RS24800	COG0196	riboflavin kinase activity
D3C65_RS24815	COG3045	CreA protein
D3C65_RS24840	COG0142	geranyltranstransferase activity
D3C65_RS24855	COG0545	Peptidyl-prolyl cis-trans isomerase
D3C65_RS24875	COG1067	ATP-dependent peptidase activity
D3C65_RS24900	COG4650	regulator
D3C65_RS24915	COG1690	Belongs to the RtcB family
D3C65_RS24920	COG3541	Predicted nucleotidyltransferase
D3C65_RS24940	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
D3C65_RS24965	COG0577	efflux transmembrane transporter activity
D3C65_RS24965	COG1136	(ABC) transporter
D3C65_RS24970	COG1136	(ABC) transporter
D3C65_RS24970	COG0577	efflux transmembrane transporter activity
D3C65_RS24975	COG0488	(ABC) transporter
D3C65_RS24995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D3C65_RS25000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS25025	COG0523	cobalamin synthesis protein
D3C65_RS25030	COG2879	small protein
D3C65_RS25035	COG1966	Carbon starvation protein
D3C65_RS25105	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
D3C65_RS25105	COG3608	succinylglutamate desuccinylase aspartoacylase
D3C65_RS25110	COG2010	Cytochrome c
D3C65_RS25150	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D3C65_RS25160	COG0833	amino acid
D3C65_RS25165	COG2119	membrane
D3C65_RS25180	COG0501	Belongs to the peptidase M48B family
D3C65_RS25185	COG0840	transmembrane signaling receptor activity
D3C65_RS25190	COG2135	peptidase activity
D3C65_RS25195	COG1285	pathogenesis
D3C65_RS25255	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
D3C65_RS25310	COG1090	epimerase
D3C65_RS25315	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
D3C65_RS25325	COG0789	Transcriptional regulator
D3C65_RS25345	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D3C65_RS25400	COG0012	GTP binding
D3C65_RS25410	COG4974	Belongs to the 'phage' integrase family
D3C65_RS25420	COG4128	Pfam Zonular occludens toxin
D3C65_RS25485	COG0515	serine threonine protein kinase
D3C65_RS25485	COG2815	serine threonine protein kinase
D3C65_RS25490	COG0515	serine threonine protein kinase
D3C65_RS25500	COG3549	Plasmid maintenance system killer
D3C65_RS25515	COG0288	reversible hydration of carbon dioxide
D3C65_RS25525	COG0456	acetyltransferase
D3C65_RS25570	COG1840	ABC-type Fe3 transport system, periplasmic component
D3C65_RS25575	COG1178	ABC-type Fe3 transport system permease component
D3C65_RS25580	COG3008	intermembrane lipid transfer
D3C65_RS25585	COG2995	paraquat-inducible protein a
D3C65_RS25590	COG2995	paraquat-inducible protein a
D3C65_RS25630	COG1183	phosphatidylcholine synthase activity
D3C65_RS25645	COG0028	Belongs to the TPP enzyme family
D3C65_RS25655	COG3098	single-species biofilm formation
D3C65_RS25665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D3C65_RS25700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D3C65_RS25705	COG4558	Periplasmic binding protein
D3C65_RS25710	COG3720	iron ion transport
D3C65_RS25715	COG4771	TonB-dependent receptor
D3C65_RS25740	COG0436	Aminotransferase
D3C65_RS25750	COG2321	neutral zinc metallopeptidase
D3C65_RS25760	COG2252	PERMEase
D3C65_RS25775	COG0436	Aminotransferase
D3C65_RS25780	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D3C65_RS25795	COG4191	Histidine kinase
D3C65_RS25900	COG0195	Participates in both transcription termination and antitermination
D3C65_RS25935	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
D3C65_RS26005	COG0497	DNA recombination
D3C65_RS26035	COG2186	Transcriptional regulator
D3C65_RS26040	COG1620	l-lactate permease
D3C65_RS26090	COG0697	spore germination
D3C65_RS26110	COG0697	spore germination
D3C65_RS26115	COG1522	sequence-specific DNA binding
D3C65_RS26125	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS26145	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D3C65_RS26155	COG0584	glycerophosphoryl diester phosphodiesterase
D3C65_RS26175	COG0509	glycine decarboxylation via glycine cleavage system
D3C65_RS26220	COG0531	amino acid
D3C65_RS26235	COG3276	selenocysteine insertion sequence binding
D3C65_RS26250	COG2864	formate dehydrogenase
D3C65_RS26255	COG0437	4 iron, 4 sulfur cluster binding
D3C65_RS26260	COG0243	molybdopterin cofactor binding
D3C65_RS26260	COG3383	formate dehydrogenase (NAD+) activity
D3C65_RS26265	COG3383	formate dehydrogenase (NAD+) activity
D3C65_RS26265	COG0243	molybdopterin cofactor binding
D3C65_RS26270	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
D3C65_RS26275	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS26275	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS26300	COG0463	Glycosyl transferase, family 2
D3C65_RS26310	COG0534	Mate efflux family protein
D3C65_RS26320	COG1283	sodium-dependent phosphate transmembrane transporter activity
D3C65_RS26345	COG2162	N-hydroxyarylamine O-acetyltransferase activity
D3C65_RS26370	COG4221	oxidoreductase activity
D3C65_RS26375	COG1272	protein, Hemolysin III
D3C65_RS26410	COG0023	Translation Initiation Factor
D3C65_RS26500	COG2095	MarC family integral membrane protein
D3C65_RS26505	COG0683	leucine binding
D3C65_RS26520	COG0411	ABC transporter
D3C65_RS26565	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D3C65_RS26580	COG0443	Heat shock 70 kDa protein
D3C65_RS26605	COG0789	Transcriptional regulator
D3C65_RS26610	COG2982	Protein involved in outer membrane biogenesis
D3C65_RS26615	COG2193	ferroxidase activity
D3C65_RS26625	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
D3C65_RS26630	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
D3C65_RS26690	COG3712	iron ion homeostasis
D3C65_RS26695	COG1595	DNA-templated transcription, initiation
D3C65_RS26715	COG2814	Major facilitator Superfamily
D3C65_RS26725	COG0583	DNA-binding transcription factor activity
D3C65_RS26750	COG4221	oxidoreductase activity
D3C65_RS26755	COG2423	ornithine cyclodeaminase activity
D3C65_RS26785	COG0583	DNA-binding transcription factor activity
D3C65_RS26800	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
D3C65_RS26840	COG0668	transmembrane transport
D3C65_RS26860	COG5001	Diguanylate cyclase
D3C65_RS26860	COG3300	MHYT domain
D3C65_RS26870	COG0305	Participates in initiation and elongation during chromosome replication
D3C65_RS26900	COG0557	exoribonuclease II activity
D3C65_RS26930	COG0330	HflC and HflK could
D3C65_RS26935	COG0330	HflC and HflK could
D3C65_RS26940	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
D3C65_RS26960	COG0860	N-Acetylmuramoyl-L-alanine amidase
D3C65_RS26965	COG0802	atpase or kinase
D3C65_RS26970	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
D3C65_RS26970	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
D3C65_RS27025	COG3300	MHYT domain
D3C65_RS27025	COG5001	Diguanylate cyclase
D3C65_RS27030	COG0560	Phosphoserine phosphatase
D3C65_RS27030	COG3830	Belongs to the UPF0237 family
D3C65_RS27040	COG1988	membrane-bound metal-dependent
D3C65_RS27055	COG3577	Aspartyl protease
D3C65_RS27070	COG3150	esterase
D3C65_RS27075	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
D3C65_RS27085	COG0494	nUDIX hydrolase
D3C65_RS27100	COG1538	Outer membrane efflux protein
D3C65_RS27105	COG2249	NAD(P)H dehydrogenase (quinone) activity
D3C65_RS27120	COG0045	succinate-CoA ligase (ADP-forming) activity
D3C65_RS27125	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS27130	COG1024	Enoyl-CoA hydratase
D3C65_RS27135	COG0833	amino acid
D3C65_RS27165	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS27165	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS27175	COG1519	Transferase
D3C65_RS27180	COG0583	DNA-binding transcription factor activity
D3C65_RS27195	COG0667	Aldo Keto reductase
D3C65_RS27205	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS27210	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS27235	COG1215	transferase activity, transferring glycosyl groups
D3C65_RS27255	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS27260	COG2192	nodulation
D3C65_RS27285	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS27290	COG0859	PFAM glycosyl transferase family 9
D3C65_RS27295	COG0859	PFAM glycosyl transferase family 9
D3C65_RS27340	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
D3C65_RS27345	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS27360	COG1196	nuclear chromosome segregation
D3C65_RS27360	COG3264	Mechanosensitive ion channel
D3C65_RS27370	COG0730	response to heat
D3C65_RS27375	COG2873	o-acetylhomoserine
D3C65_RS27390	COG1192	Involved in chromosome partitioning
D3C65_RS27395	COG0583	DNA-binding transcription factor activity
D3C65_RS27400	COG2814	Major facilitator Superfamily
D3C65_RS27425	COG0493	'glutamate synthase
D3C65_RS27430	COG0067	glutamate synthase
D3C65_RS27430	COG0070	glutamate synthase
D3C65_RS27430	COG0069	glutamate synthase activity
D3C65_RS27480	COG0281	malic enzyme
D3C65_RS27500	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
D3C65_RS27620	COG0840	transmembrane signaling receptor activity
D3C65_RS27630	COG1126	abc transporter atp-binding protein
D3C65_RS27635	COG0765	amino acid transport
D3C65_RS27665	COG1051	belongs to the nudix hydrolase family
D3C65_RS27670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D3C65_RS27675	COG0251	oxidation-reduction process
D3C65_RS27705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D3C65_RS27725	COG2986	histidine ammonia-lyase
D3C65_RS27730	COG4175	Glycine betaine
D3C65_RS27735	COG4176	ABC-type proline glycine betaine transport system permease component
D3C65_RS27755	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D3C65_RS27790	COG0402	S-adenosylhomocysteine deaminase activity
D3C65_RS27840	COG0789	Transcriptional regulator
D3C65_RS27845	COG1217	gtp-binding protein TYPA
D3C65_RS27870	COG0668	transmembrane transport
D3C65_RS27885	COG3852	Histidine kinase
D3C65_RS27905	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
D3C65_RS27935	COG4942	peptidase
D3C65_RS27940	COG0793	Belongs to the peptidase S41A family
D3C65_RS27945	COG2861	carbohydrate metabolic process
D3C65_RS28005	COG0579	oxidoreductase
D3C65_RS28015	COG1194	a g-specific adenine glycosylase
D3C65_RS28025	COG0673	inositol 2-dehydrogenase activity
D3C65_RS28035	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS28070	COG1846	Transcriptional regulator
D3C65_RS28080	COG1566	PFAM secretion protein HlyD family protein
D3C65_RS28085	COG2814	Major facilitator Superfamily
D3C65_RS28095	COG1088	dTDP-glucose 4,6-dehydratase activity
D3C65_RS28100	COG1091	dTDP-4-dehydrorhamnose reductase activity
D3C65_RS28165	COG1218	3'(2'),5'-bisphosphate nucleotidase
D3C65_RS28170	COG0494	nUDIX hydrolase
D3C65_RS28175	COG1011	Hydrolase
D3C65_RS28180	COG1652	LysM domain
D3C65_RS28190	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
D3C65_RS28210	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
D3C65_RS28220	COG0824	Thioesterase
D3C65_RS28225	COG1454	alcohol dehydrogenase
D3C65_RS28230	COG1960	acyl-CoA dehydrogenase activity
D3C65_RS28235	COG1250	3-hydroxyacyl-CoA dehydrogenase
D3C65_RS28235	COG1024	Enoyl-CoA hydratase
D3C65_RS28245	COG0778	Nitroreductase
D3C65_RS28275	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
D3C65_RS28280	COG0189	ligase activity
D3C65_RS28280	COG4067	protein conserved in archaea
D3C65_RS28305	COG2183	response to ionizing radiation
D3C65_RS28335	COG0306	phosphate transporter
D3C65_RS28340	COG1392	Phosphate transport regulator
D3C65_RS28345	COG3025	triphosphatase activity
D3C65_RS28350	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D3C65_RS28380	COG1178	ABC-type Fe3 transport system permease component
D3C65_RS28390	COG0583	DNA-binding transcription factor activity
D3C65_RS28405	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D3C65_RS28415	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D3C65_RS28420	COG0006	proline dipeptidase activity
D3C65_RS28445	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
D3C65_RS28455	COG0842	Transport permease protein
D3C65_RS28460	COG1129	ABC transporter
D3C65_RS28460	COG0842	Transport permease protein
D3C65_RS28465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D3C65_RS28480	COG2271	Major facilitator Superfamily
D3C65_RS28495	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
D3C65_RS28495	COG2755	lipolytic protein G-D-S-L family
D3C65_RS28525	COG0586	Pfam SNARE associated Golgi protein
D3C65_RS28530	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
D3C65_RS28535	COG2050	protein possibly involved in aromatic compounds catabolism
D3C65_RS28545	COG0672	)-iron permease
D3C65_RS28550	COG1280	lysine exporter protein (LysE YggA)
D3C65_RS28555	COG0861	Integral membrane protein TerC family
D3C65_RS28565	COG0488	(ABC) transporter
D3C65_RS28620	COG3275	phosphorelay sensor kinase activity
D3C65_RS28655	COG0598	Magnesium transport protein CorA
D3C65_RS28685	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D3C65_RS28755	COG0432	Pfam Uncharacterised protein family UPF0047
D3C65_RS28760	COG0004	ammonium transporteR
D3C65_RS28765	COG0347	Belongs to the P(II) protein family
D3C65_RS28775	COG0606	chelatase, subunit chli
D3C65_RS28780	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D3C65_RS28790	COG0583	DNA-binding transcription factor activity
D3C65_RS28805	COG0210	DNA helicase
D3C65_RS28810	COG0028	Belongs to the TPP enzyme family
D3C65_RS28820	COG0427	acetyl-CoA hydrolase
D3C65_RS28830	COG1917	Cupin 2, conserved barrel domain protein
D3C65_RS28830	COG1396	sequence-specific DNA binding
D3C65_RS28840	COG0251	oxidation-reduction process
D3C65_RS28870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D3C65_RS28875	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D3C65_RS28880	COG2814	Major facilitator Superfamily
D3C65_RS28885	COG1012	belongs to the aldehyde dehydrogenase family
D3C65_RS28890	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D3C65_RS28910	COG0747	negative chemotaxis
D3C65_RS28925	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
D3C65_RS28965	COG3245	cytochrome
D3C65_RS28985	COG0708	Exodeoxyribonuclease III
D3C65_RS29000	COG1561	YicC-like family, N-terminal region
D3C65_RS29015	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D3C65_RS29035	COG4753	response regulator
D3C65_RS29035	COG2207	Transcriptional regulator
D3C65_RS29045	COG0583	DNA-binding transcription factor activity
D3C65_RS29050	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
D3C65_RS29090	COG3193	protein, possibly involved in utilization of glycolate and propanediol
D3C65_RS29095	COG0247	lactate metabolic process
D3C65_RS29100	COG0277	FAD linked oxidase domain protein
D3C65_RS29105	COG0277	FAD linked oxidase domain protein
D3C65_RS29110	COG2186	Transcriptional regulator
D3C65_RS29140	COG1253	flavin adenine dinucleotide binding
D3C65_RS29145	COG0739	heme binding
D3C65_RS29165	COG0573	inorganic phosphate transmembrane transporter activity
D3C65_RS29205	COG0477	Major facilitator Superfamily
D3C65_RS29210	COG1607	acyl-coa hydrolase
D3C65_RS29235	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D3C65_RS29240	COG4175	Glycine betaine
D3C65_RS29245	COG4176	ABC-type proline glycine betaine transport system permease component
D3C65_RS29255	COG1760	l-serine dehydratase
D3C65_RS29270	COG0583	DNA-binding transcription factor activity
D3C65_RS29280	COG0657	acetylesterase activity
D3C65_RS29295	COG3246	L-lysine catabolic process to acetate
D3C65_RS29350	COG1902	pentaerythritol trinitrate reductase activity
D3C65_RS29350	COG0446	pyridine nucleotide-disulphide oxidoreductase
D3C65_RS29355	COG0247	lactate metabolic process
D3C65_RS29355	COG2181	nitrate reductase activity
D3C65_RS29375	COG3655	Transcriptional regulator
D3C65_RS29415	COG1017	nitric oxide dioxygenase activity
D3C65_RS29415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D3C65_RS29505	COG0583	DNA-binding transcription factor activity
D3C65_RS29520	COG2391	methyltransferase activity
D3C65_RS29545	COG5016	pyruvate
D3C65_RS29545	COG0511	ligase activity, forming carbon-carbon bonds
D3C65_RS29550	COG0439	Biotin carboxylase
D3C65_RS29555	COG0583	DNA-binding transcription factor activity
D3C65_RS29570	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
D3C65_RS29575	COG0826	peptidase U32
D3C65_RS29595	COG0210	DNA helicase
D3C65_RS29605	COG0427	acetyl-CoA hydrolase
D3C65_RS29620	COG0438	transferase activity, transferring glycosyl groups
D3C65_RS29665	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D3C65_RS29670	COG2755	lipolytic protein G-D-S-L family
D3C65_RS29670	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
D3C65_RS29710	COG0679	Auxin Efflux Carrier
D3C65_RS29720	COG2851	Citrate transporter
D3C65_RS29725	COG0861	Integral membrane protein TerC family
D3C65_RS29730	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
D3C65_RS29735	COG1690	Belongs to the RtcB family
D3C65_RS29780	COG0700	Nucleoside recognition
D3C65_RS29785	COG1301	dicarboxylic acid transport
D3C65_RS29810	COG5002	protein histidine kinase activity
D3C65_RS29815	COG3023	N-Acetylmuramoyl-L-alanine amidase
D3C65_RS29820	COG2095	MarC family integral membrane protein
D3C65_RS29845	COG3245	cytochrome
D3C65_RS29880	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
D3C65_RS29885	COG0735	belongs to the Fur family
D3C65_RS29895	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D3C65_RS29910	COG2011	ABC-type metal ion transport system permease component
D3C65_RS29940	COG0531	amino acid
D3C65_RS29950	COG4191	Histidine kinase
D3C65_RS29980	COG4651	solute:proton antiporter activity
D3C65_RS29980	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
D3C65_RS29985	COG1607	acyl-coa hydrolase
D3C65_RS29995	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS30000	COG0174	glutamine synthetase
D3C65_RS30005	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
D3C65_RS30010	COG1028	Short-chain dehydrogenase reductase Sdr
D3C65_RS30035	COG4651	solute:proton antiporter activity
D3C65_RS30035	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
D3C65_RS30040	COG0477	Major facilitator Superfamily
D3C65_RS30095	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
D3C65_RS30115	COG2358	TRAP transporter, solute receptor (TAXI family
D3C65_RS30120	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
D3C65_RS30140	COG1349	DNA-binding transcription factor activity
D3C65_RS30200	COG1475	DNA binding
D3C65_RS30205	COG1192	Involved in chromosome partitioning