locus-tag	class	description
Y82_RS00035	COG2010	Cytochrome c
Y82_RS00050	COG2818	Glycosylase
Y82_RS00065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
Y82_RS00080	COG0569	domain protein
Y82_RS00100	COG1652	LysM domain
Y82_RS00105	COG0758	DNA mediated transformation
Y82_RS00135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS00155	COG3119	arylsulfatase activity
Y82_RS00160	COG0583	DNA-binding transcription factor activity
Y82_RS00195	COG3360	Dodecin
Y82_RS00395	COG3174	membrane
Y82_RS00435	COG0367	asparagine synthase
Y82_RS00455	COG0583	DNA-binding transcription factor activity
Y82_RS00470	COG1764	response to oxidative stress
Y82_RS00505	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
Y82_RS00510	COG0339	signal peptide processing
Y82_RS00515	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
Y82_RS00530	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Y82_RS00545	COG0515	serine threonine protein kinase
Y82_RS00545	COG2815	serine threonine protein kinase
Y82_RS00550	COG0631	protein serine/threonine phosphatase activity
Y82_RS00565	COG1360	Flagellar Motor Protein
Y82_RS00690	COG0659	secondary active sulfate transmembrane transporter activity
Y82_RS00705	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
Y82_RS00740	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
Y82_RS00780	COG2153	protein acetylation
Y82_RS00820	COG0583	DNA-binding transcription factor activity
Y82_RS00845	COG2824	Alkylphosphonate utilization operon protein PhnA
Y82_RS00875	COG0402	S-adenosylhomocysteine deaminase activity
Y82_RS00885	COG3845	ABC transporter
Y82_RS00890	COG4603	Belongs to the binding-protein-dependent transport system permease family
Y82_RS00895	COG1079	Belongs to the binding-protein-dependent transport system permease family
Y82_RS00970	COG0583	DNA-binding transcription factor activity
Y82_RS00975	COG3485	protocatechuate 3,4-dioxygenase
Y82_RS00980	COG3485	protocatechuate 3,4-dioxygenase
Y82_RS00990	COG1414	Transcriptional regulator
Y82_RS01005	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS01010	COG0583	DNA-binding transcription factor activity
Y82_RS01045	COG2233	PERMEase
Y82_RS01050	COG1309	transcriptional regulator
Y82_RS01085	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
Y82_RS01100	COG0835	chemotaxis
Y82_RS01105	COG2198	Histidine kinase
Y82_RS01105	COG0643	Histidine kinase
Y82_RS01110	COG0745	RESPONSE REGULATOR receiver
Y82_RS01120	COG0583	DNA-binding transcription factor activity
Y82_RS01125	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS01135	COG1116	anion transmembrane transporter activity
Y82_RS01140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS01145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS01190	COG2175	clavaminate synthase activity
Y82_RS01265	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Y82_RS01295	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS01300	COG1113	amino acid transport
Y82_RS01315	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Y82_RS01320	COG0235	Class ii aldolase
Y82_RS01325	COG1396	sequence-specific DNA binding
Y82_RS01330	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Y82_RS01335	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
Y82_RS01345	COG0477	Major facilitator Superfamily
Y82_RS01355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Y82_RS01360	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Y82_RS01365	COG0583	DNA-binding transcription factor activity
Y82_RS01385	COG0673	inositol 2-dehydrogenase activity
Y82_RS01405	COG2271	Major facilitator Superfamily
Y82_RS01415	COG1309	transcriptional regulator
Y82_RS01420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Y82_RS01430	COG0477	Major facilitator Superfamily
Y82_RS01450	COG2239	Acts as a magnesium transporter
Y82_RS01550	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Y82_RS01570	COG4372	Transposase
Y82_RS01585	COG0640	Transcriptional regulator
Y82_RS01590	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS01595	COG0604	alcohol dehydrogenase
Y82_RS01620	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Y82_RS01620	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Y82_RS01645	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS01650	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS01665	COG0583	DNA-binding transcription factor activity
Y82_RS01670	COG4221	oxidoreductase activity
Y82_RS01720	COG3321	synthase
Y82_RS01720	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS01720	COG0604	alcohol dehydrogenase
Y82_RS01760	COG0745	RESPONSE REGULATOR receiver
Y82_RS01770	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Y82_RS01785	COG0583	DNA-binding transcription factor activity
Y82_RS01790	COG2807	transmembrane transport
Y82_RS01810	COG0501	Belongs to the peptidase M48B family
Y82_RS01830	COG4208	sulfate ABC transporter
Y82_RS01840	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Y82_RS01875	COG2199	diguanylate cyclase activity
Y82_RS01900	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Y82_RS01905	COG0174	glutamine synthetase
Y82_RS01910	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
Y82_RS01915	COG0174	glutamine synthetase
Y82_RS01935	COG3842	ATPase activity
Y82_RS01940	COG1176	ABC-type spermidine putrescine transport system, permease component I
Y82_RS01945	COG1177	transmembrane transport
Y82_RS02000	COG0765	amino acid transport
Y82_RS02015	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Y82_RS02020	COG0277	FAD linked oxidase domain protein
Y82_RS02025	COG0179	Fumarylacetoacetate (FAA) hydrolase
Y82_RS02035	COG3111	PFAM Bacterial OB fold (BOF) protein
Y82_RS02045	COG0531	amino acid
Y82_RS02050	COG2182	Extracellular solute-binding protein
Y82_RS02055	COG1177	transmembrane transport
Y82_RS02065	COG3842	ATPase activity
Y82_RS02075	COG3204	pilus organization
Y82_RS02080	COG2234	aminopeptidase activity
Y82_RS02100	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Y82_RS02110	COG0702	epimerase
Y82_RS02150	COG0730	response to heat
Y82_RS02185	COG0584	glycerophosphoryl diester phosphodiesterase
Y82_RS02205	COG0622	Phosphoesterase
Y82_RS02210	COG2233	PERMEase
Y82_RS02225	COG0693	protein deglycase activity
Y82_RS02260	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Y82_RS02270	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Y82_RS02295	COG0429	hydrolase of the alpha beta-hydrolase fold
Y82_RS02305	COG0742	ribosomal rna small subunit methyltransferase
Y82_RS02310	COG0612	Peptidase, M16
Y82_RS02315	COG0612	Peptidase, M16
Y82_RS02320	COG0552	protein localization to endoplasmic reticulum
Y82_RS02325	COG2884	Cell division ATP-binding protein ftsE
Y82_RS02330	COG2177	Part of the ABC transporter FtsEX involved in
Y82_RS02350	COG2363	Small membrane protein
Y82_RS02385	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Y82_RS02400	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Y82_RS02400	COG2813	Specifically methylates the guanine in position
Y82_RS02410	COG1160	GTP binding
Y82_RS02415	COG1872	DUF167
Y82_RS02460	COG0626	cystathionine gamma-synthase activity
Y82_RS02525	COG0784	Response regulator, receiver
Y82_RS02525	COG2198	Histidine kinase
Y82_RS02525	COG0643	Histidine kinase
Y82_RS02555	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Y82_RS02575	COG3038	cytochrome b561
Y82_RS02605	COG0513	Belongs to the DEAD box helicase family
Y82_RS02615	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Y82_RS02620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Y82_RS02645	COG1309	transcriptional regulator
Y82_RS02650	COG0402	S-adenosylhomocysteine deaminase activity
Y82_RS02655	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Y82_RS02690	COG1953	Uracil, thiamine, allantoin
Y82_RS02705	COG1960	acyl-CoA dehydrogenase activity
Y82_RS02710	COG0583	DNA-binding transcription factor activity
Y82_RS02720	COG0306	phosphate transporter
Y82_RS02730	COG0330	HflC and HflK could
Y82_RS02740	COG1289	transmembrane transporter activity
Y82_RS02745	COG0513	Belongs to the DEAD box helicase family
Y82_RS02755	COG4067	protein conserved in archaea
Y82_RS02755	COG0189	ligase activity
Y82_RS02765	COG0477	Major facilitator Superfamily
Y82_RS02770	COG0542	response to heat
Y82_RS02780	COG0204	Acyl-transferase
Y82_RS02790	COG0745	RESPONSE REGULATOR receiver
Y82_RS02795	COG2205	protein histidine kinase activity
Y82_RS02800	COG4452	Inner membrane protein CreD
Y82_RS02830	COG4774	siderophore transport
Y82_RS02835	COG3712	iron ion homeostasis
Y82_RS02840	COG1595	DNA-templated transcription, initiation
Y82_RS02845	COG0625	glutathione transferase activity
Y82_RS02855	COG1309	transcriptional regulator
Y82_RS02860	COG1953	Uracil, thiamine, allantoin
Y82_RS02880	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Y82_RS02915	COG2005	Transcriptional regulator
Y82_RS02915	COG3585	molybdate ion transport
Y82_RS02920	COG5544	Lipoprotein
Y82_RS02925	COG1040	competence protein
Y82_RS02945	COG0511	ligase activity, forming carbon-carbon bonds
Y82_RS02960	COG1984	allophanate hydrolase subunit 2
Y82_RS02975	COG3121	Chaperone
Y82_RS02990	COG2226	methyltransferase
Y82_RS02990	COG1073	alpha beta
Y82_RS03010	COG1960	acyl-CoA dehydrogenase activity
Y82_RS03015	COG1960	acyl-CoA dehydrogenase activity
Y82_RS03025	COG1960	acyl-CoA dehydrogenase activity
Y82_RS03035	COG1648	precorrin-2 dehydrogenase activity
Y82_RS03035	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Y82_RS03120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Y82_RS03125	COG0583	DNA-binding transcription factor activity
Y82_RS03130	COG2258	MOSC domain
Y82_RS03140	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Y82_RS03165	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS03175	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Y82_RS03230	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Y82_RS03235	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
Y82_RS03245	COG3622	Belongs to the hyi family
Y82_RS03250	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Y82_RS03290	COG2081	HI0933 family
Y82_RS03295	COG1451	nucleotide metabolic process
Y82_RS03300	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Y82_RS03305	COG3152	Membrane
Y82_RS03310	COG1917	Cupin 2, conserved barrel domain protein
Y82_RS03310	COG4977	sequence-specific DNA binding
Y82_RS03315	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Y82_RS03375	COG3344	reverse transcriptase
Y82_RS03415	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Y82_RS03435	COG2719	SpoVR family
Y82_RS03445	COG2766	serine protein kinase
Y82_RS03485	COG3344	reverse transcriptase
Y82_RS03505	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
Y82_RS03520	COG2197	response regulator
Y82_RS03530	COG3842	ATPase activity
Y82_RS03540	COG1176	ABC-type spermidine putrescine transport system, permease component I
Y82_RS03550	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Y82_RS03575	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Y82_RS03660	COG3179	chitinase
Y82_RS03695	COG1765	OsmC-like protein
Y82_RS03710	COG0537	adenosine 5'-monophosphoramidase activity
Y82_RS03720	COG0300	oxidoreductase activity
Y82_RS03735	COG1981	membrane
Y82_RS03765	COG0739	heme binding
Y82_RS03930	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Y82_RS04055	COG2814	Major facilitator Superfamily
Y82_RS04080	COG1021	2,3-dihydroxybenzoate-AMP ligase
Y82_RS04090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Y82_RS04090	COG2226	methyltransferase
Y82_RS04090	COG3433	isochorismatase activity
Y82_RS04095	COG3433	isochorismatase activity
Y82_RS04095	COG2226	methyltransferase
Y82_RS04095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Y82_RS04105	COG1132	(ABC) transporter
Y82_RS04105	COG2375	cellular response to nickel ion
Y82_RS04190	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS04195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS04205	COG2706	6-phosphogluconolactonase activity
Y82_RS04225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Y82_RS04230	COG1960	acyl-CoA dehydrogenase activity
Y82_RS04240	COG4191	Histidine kinase
Y82_RS04245	COG4566	intracellular signal transduction
Y82_RS04250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS04255	COG0765	amino acid transport
Y82_RS04260	COG0765	amino acid transport
Y82_RS04280	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS04285	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Y82_RS04290	COG2271	Major facilitator Superfamily
Y82_RS04340	COG2226	methyltransferase
Y82_RS04350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS04365	COG0251	oxidation-reduction process
Y82_RS04375	COG0693	protein deglycase activity
Y82_RS04380	COG0492	ferredoxin-NADP+ reductase activity
Y82_RS04385	COG1959	2 iron, 2 sulfur cluster binding
Y82_RS04415	COG0154	amidase activity
Y82_RS04420	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS04425	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Y82_RS04430	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Y82_RS04435	COG4592	Periplasmic binding protein
Y82_RS04440	COG1120	ATPase activity
Y82_RS04450	COG4774	siderophore transport
Y82_RS04450	COG1629	transport
Y82_RS04455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS04460	COG4991	sh3 domain protein
Y82_RS04465	COG1063	alcohol dehydrogenase
Y82_RS04475	COG0022	dehydrogenase e1 component
Y82_RS04480	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Y82_RS04485	COG3199	ATP-NAD kinase
Y82_RS04495	COG3284	Transcriptional regulator
Y82_RS04520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS04555	COG2814	Major facilitator Superfamily
Y82_RS04560	COG1846	Transcriptional regulator
Y82_RS04570	COG3278	Belongs to the heme-copper respiratory oxidase family
Y82_RS04575	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Y82_RS04585	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Y82_RS04600	COG3971	2-oxopent-4-enoate hydratase activity
Y82_RS04605	COG2271	Major facilitator Superfamily
Y82_RS04615	COG3384	dioxygenase
Y82_RS04620	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS04660	COG1611	Belongs to the LOG family
Y82_RS04720	COG2259	Doxx family
Y82_RS04730	COG2205	protein histidine kinase activity
Y82_RS04755	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS04760	COG1063	alcohol dehydrogenase
Y82_RS04765	COG2271	Major facilitator Superfamily
Y82_RS04815	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS04820	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Y82_RS04835	COG3121	Chaperone
Y82_RS04840	COG3188	usher protein
Y82_RS04860	COG2197	response regulator
Y82_RS04900	COG0531	amino acid
Y82_RS04920	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Y82_RS04930	COG3047	cAMP biosynthetic process
Y82_RS04960	COG3118	belongs to the thioredoxin family
Y82_RS04965	COG2264	protein methyltransferase activity
Y82_RS04985	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Y82_RS04985	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Y82_RS05010	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Y82_RS05015	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Y82_RS05025	COG3577	Aspartyl protease
Y82_RS05050	COG0142	geranyltranstransferase activity
Y82_RS05060	COG4948	Mandelate Racemase Muconate Lactonizing
Y82_RS05080	COG1131	(ABC) transporter
Y82_RS05085	COG5002	protein histidine kinase activity
Y82_RS05105	COG0745	RESPONSE REGULATOR receiver
Y82_RS05115	COG3228	Belongs to the MtfA family
Y82_RS05120	COG0586	Pfam SNARE associated Golgi protein
Y82_RS05135	COG0456	acetyltransferase
Y82_RS05145	COG4303	Ethanolamine ammonia lyase large subunit
Y82_RS05150	COG0531	amino acid
Y82_RS05160	COG3284	Transcriptional regulator
Y82_RS05165	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Y82_RS05180	COG0702	epimerase
Y82_RS05200	COG1346	cytolysis
Y82_RS05210	COG0586	Pfam SNARE associated Golgi protein
Y82_RS05250	COG0768	penicillin binding
Y82_RS05255	COG0772	Belongs to the SEDS family
Y82_RS05260	COG2951	lytic endotransglycosylase activity
Y82_RS05270	COG1686	Belongs to the peptidase S11 family
Y82_RS05300	COG2951	lytic endotransglycosylase activity
Y82_RS05335	COG1434	Gram-negative-bacterium-type cell wall biogenesis
Y82_RS05345	COG4535	Mg2 and Co2 transporter CorC
Y82_RS05355	COG1702	phosphate starvation-inducible protein PhoH
Y82_RS05385	COG0351	phosphomethylpyrimidine kinase
Y82_RS05390	COG0784	Response regulator, receiver
Y82_RS05390	COG2198	Histidine kinase
Y82_RS05390	COG2205	protein histidine kinase activity
Y82_RS05400	COG1960	acyl-CoA dehydrogenase activity
Y82_RS05410	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
Y82_RS05450	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
Y82_RS05460	COG1643	Atp-dependent helicase
Y82_RS05465	COG1643	Atp-dependent helicase
Y82_RS05650	COG0659	secondary active sulfate transmembrane transporter activity
Y82_RS05655	COG0589	response to stress
Y82_RS05690	COG1643	Atp-dependent helicase
Y82_RS05725	COG1061	Type III restriction enzyme res subunit
Y82_RS05745	COG4372	Transposase
Y82_RS05860	COG3416	Protein conserved in bacteria
Y82_RS05870	COG0513	Belongs to the DEAD box helicase family
Y82_RS05885	COG2197	response regulator
Y82_RS05890	COG2202	Pas domain
Y82_RS05890	COG2199	diguanylate cyclase activity
Y82_RS05890	COG2200	EAL domain
Y82_RS05895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS05895	COG2205	protein histidine kinase activity
Y82_RS05915	COG1946	Acyl-CoA thioesterase
Y82_RS05935	COG4521	taurine ABC transporter
Y82_RS05945	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS05950	COG2175	clavaminate synthase activity
Y82_RS05955	COG1297	OPT oligopeptide transporter protein
Y82_RS05960	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Y82_RS05975	COG1271	oxidase subunit
Y82_RS05980	COG1294	oxidase, subunit
Y82_RS05990	COG2207	Transcriptional regulator
Y82_RS06000	COG0183	Belongs to the thiolase family
Y82_RS06005	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS06040	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
Y82_RS06050	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
Y82_RS06060	COG0521	Mo-molybdopterin cofactor biosynthetic process
Y82_RS06065	COG0303	'Molybdopterin
Y82_RS06070	COG0826	peptidase U32
Y82_RS06075	COG0826	peptidase U32
Y82_RS06080	COG3154	lipid carrier protein
Y82_RS06130	COG4772	TonB-dependent receptor
Y82_RS06135	COG3712	iron ion homeostasis
Y82_RS06140	COG1595	DNA-templated transcription, initiation
Y82_RS06150	COG0697	spore germination
Y82_RS06160	COG0583	DNA-binding transcription factor activity
Y82_RS06180	COG1566	PFAM secretion protein HlyD family protein
Y82_RS06235	COG0300	oxidoreductase activity
Y82_RS06240	COG2226	methyltransferase
Y82_RS06255	COG2197	response regulator
Y82_RS06260	COG3850	Histidine kinase
Y82_RS06270	COG2223	nitrite transmembrane transporter activity
Y82_RS06275	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
Y82_RS06280	COG1140	nitrate reductase beta subunit
Y82_RS06285	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
Y82_RS06290	COG2181	nitrate reductase activity
Y82_RS06295	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS06305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS06335	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS06345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS06410	COG0583	DNA-binding transcription factor activity
Y82_RS06450	COG0471	metal ion transport
Y82_RS06450	COG0490	domain, Protein
Y82_RS06455	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
Y82_RS06460	COG4120	Belongs to the binding-protein-dependent transport system permease family
Y82_RS06510	COG0795	lipopolysaccharide-transporting ATPase activity
Y82_RS06515	COG0795	lipopolysaccharide-transporting ATPase activity
Y82_RS06525	COG2200	EAL domain
Y82_RS06555	COG1862	Preprotein translocase
Y82_RS06570	COG3134	Outer membrane lipoprotein
Y82_RS06585	COG1045	serine acetyltransferase
Y82_RS06675	COG0436	Aminotransferase
Y82_RS06690	COG0667	Aldo Keto reductase
Y82_RS06730	COG0739	heme binding
Y82_RS06740	COG2847	Copper chaperone PCu(A)C
Y82_RS06765	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
Y82_RS06775	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
Y82_RS06780	COG0583	DNA-binding transcription factor activity
Y82_RS06830	COG0582	viral genome integration into host DNA
Y82_RS06900	COG2003	Belongs to the UPF0758 family
Y82_RS06920	COG1475	DNA binding
Y82_RS06935	COG5489	Protein of unknown function (DUF736)
Y82_RS06975	COG1192	Involved in chromosome partitioning
Y82_RS07015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Y82_RS07045	COG4372	Transposase
Y82_RS07075	COG2267	carboxylic ester hydrolase activity
Y82_RS07080	COG0583	DNA-binding transcription factor activity
Y82_RS07100	COG4962	Type ii secretion system protein e
Y82_RS07105	COG3838	Conjugal transfer protein Trbc
Y82_RS07115	COG3451	type IV secretory pathway VirB4
Y82_RS07130	COG3846	protein secretion by the type IV secretion system
Y82_RS07145	COG2948	multi-organism process
Y82_RS07155	COG2132	Multicopper oxidase
Y82_RS07160	COG0590	tRNA wobble adenosine to inosine editing
Y82_RS07205	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
Y82_RS07205	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Y82_RS07210	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Y82_RS07215	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
Y82_RS07220	COG2188	Transcriptional regulator
Y82_RS07260	COG0477	Major facilitator Superfamily
Y82_RS07270	COG4536	flavin adenine dinucleotide binding
Y82_RS07280	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Y82_RS07305	COG1607	acyl-coa hydrolase
Y82_RS07325	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Y82_RS07350	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Y82_RS07375	COG2255	four-way junction helicase activity
Y82_RS07390	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Y82_RS07400	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS07445	COG2197	response regulator
Y82_RS07450	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
Y82_RS07470	COG0477	Major facilitator Superfamily
Y82_RS07540	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
Y82_RS07540	COG1073	alpha beta
Y82_RS07540	COG3064	Membrane
Y82_RS07555	COG2885	chlorophyll binding
Y82_RS07570	COG0789	Transcriptional regulator
Y82_RS07590	COG1214	PFAM Peptidase M22, glycoprotease
Y82_RS07600	COG1801	Protein of unknown function DUF72
Y82_RS07605	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
Y82_RS07630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS07675	COG2166	iron-sulfur cluster assembly
Y82_RS07695	COG1393	Belongs to the ArsC family
Y82_RS07775	COG1475	DNA binding
Y82_RS07825	COG3646	Phage regulatory protein
Y82_RS07825	COG3645	SOS response
Y82_RS07830	COG4626	Terminase
Y82_RS07830	COG1802	Transcriptional regulator
Y82_RS07870	COG3179	chitinase
Y82_RS07895	COG4695	Portal protein
Y82_RS07900	COG0740	serine-type endopeptidase activity
Y82_RS08040	COG0025	NhaP-type Na H and K H
Y82_RS08045	COG0436	Aminotransferase
Y82_RS08055	COG0024	Methionine aminopeptidase
Y82_RS08135	COG1115	amino acid carrier protein
Y82_RS08185	COG2391	methyltransferase activity
Y82_RS08190	COG0583	DNA-binding transcription factor activity
Y82_RS08195	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
Y82_RS08200	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
Y82_RS08255	COG1546	Belongs to the CinA family
Y82_RS08275	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Y82_RS08280	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Y82_RS08285	COG3530	Putative quorum-sensing-regulated virulence factor
Y82_RS08300	COG1177	transmembrane transport
Y82_RS08305	COG1176	ABC-type spermidine putrescine transport system, permease component I
Y82_RS08315	COG3148	PFAM DTW domain containing protein
Y82_RS08335	COG0069	glutamate synthase activity
Y82_RS08360	COG0531	amino acid
Y82_RS08365	COG2169	Transcriptional regulator
Y82_RS08365	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Y82_RS08370	COG0477	Major facilitator Superfamily
Y82_RS08380	COG0583	DNA-binding transcription factor activity
Y82_RS08385	COG1960	acyl-CoA dehydrogenase activity
Y82_RS08390	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Y82_RS08395	COG1024	Enoyl-CoA hydratase
Y82_RS08400	COG1250	3-hydroxyacyl-CoA dehydrogenase
Y82_RS08405	COG0183	Belongs to the thiolase family
Y82_RS08415	COG0583	DNA-binding transcription factor activity
Y82_RS08455	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Y82_RS08500	COG2814	Major facilitator Superfamily
Y82_RS08540	COG0583	DNA-binding transcription factor activity
Y82_RS08550	COG0084	hydrolase, TatD family'
Y82_RS08555	COG1609	Transcriptional regulator
Y82_RS08565	COG1105	Belongs to the carbohydrate kinase PfkB family
Y82_RS08570	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
Y82_RS08570	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Y82_RS08570	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
Y82_RS08685	COG3842	ATPase activity
Y82_RS08705	COG0243	molybdopterin cofactor binding
Y82_RS08710	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
Y82_RS08715	COG2223	nitrite transmembrane transporter activity
Y82_RS08730	COG0450	alkyl hydroperoxide reductase
Y82_RS08760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS08795	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Y82_RS08800	COG2264	protein methyltransferase activity
Y82_RS08810	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Y82_RS08865	COG0489	protein tyrosine kinase activity
Y82_RS08915	COG0791	NLP P60 protein
Y82_RS08935	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
Y82_RS08940	COG0668	transmembrane transport
Y82_RS08945	COG0477	Major facilitator Superfamily
Y82_RS08950	COG0513	Belongs to the DEAD box helicase family
Y82_RS08970	COG2205	protein histidine kinase activity
Y82_RS08970	COG5002	protein histidine kinase activity
Y82_RS08970	COG0784	Response regulator, receiver
Y82_RS08975	COG1363	Peptidase, m42
Y82_RS08980	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Y82_RS08980	COG0189	ligase activity
Y82_RS08985	COG0367	asparagine synthase
Y82_RS09015	COG0183	Belongs to the thiolase family
Y82_RS09035	COG0450	alkyl hydroperoxide reductase
Y82_RS09040	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS09045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS09055	COG0431	NADPH-dependent FMN reductase
Y82_RS09060	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS09070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS09095	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
Y82_RS09125	COG0583	DNA-binding transcription factor activity
Y82_RS09130	COG1380	Effector of murein hydrolase LrgA
Y82_RS09135	COG1346	cytolysis
Y82_RS09155	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS09160	COG1024	Enoyl-CoA hydratase
Y82_RS09170	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
Y82_RS09215	COG0508	dehydrogenase complex catalyzes the overall conversion of
Y82_RS09255	COG1629	transport
Y82_RS09310	COG0583	DNA-binding transcription factor activity
Y82_RS09385	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
Y82_RS09390	COG3639	organic phosphonate transmembrane transporter activity
Y82_RS09395	COG2188	Transcriptional regulator
Y82_RS09400	COG3624	Phosphonate C-P lyase system protein PhnG
Y82_RS09410	COG3626	phosphonate metabolism
Y82_RS09415	COG3627	carbon phosphorus lyase activity
Y82_RS09420	COG4107	phosphonate C-P lyase system protein PhnK
Y82_RS09425	COG4778	phosphonate C-P lyase system protein PhnL
Y82_RS09430	COG3454	Phosphonate metabolism
Y82_RS09440	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
Y82_RS09515	COG0697	spore germination
Y82_RS09540	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
Y82_RS09560	COG0784	Response regulator, receiver
Y82_RS09560	COG0835	chemotaxis
Y82_RS09575	COG0745	RESPONSE REGULATOR receiver
Y82_RS09585	COG0514	ATP-dependent DNA helicase (RecQ)
Y82_RS09590	COG2203	Gaf domain
Y82_RS09590	COG3706	GGDEF domain
Y82_RS09590	COG4251	negative regulation of phosphorylation
Y82_RS09590	COG5001	Diguanylate cyclase
Y82_RS09615	COG1752	Esterase of the alpha-beta hydrolase superfamily
Y82_RS09655	COG2124	cytochrome p450
Y82_RS09660	COG4221	oxidoreductase activity
Y82_RS09705	COG0583	DNA-binding transcription factor activity
Y82_RS09735	COG3639	organic phosphonate transmembrane transporter activity
Y82_RS09745	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
Y82_RS09750	COG2084	Dehydrogenase
Y82_RS09765	COG0589	response to stress
Y82_RS09805	COG2814	Major facilitator Superfamily
Y82_RS09810	COG2030	dehydratase
Y82_RS09815	COG2267	carboxylic ester hydrolase activity
Y82_RS09820	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS09825	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS09840	COG1643	Atp-dependent helicase
Y82_RS09850	COG0537	adenosine 5'-monophosphoramidase activity
Y82_RS09905	COG1595	DNA-templated transcription, initiation
Y82_RS09980	COG1201	RNA secondary structure unwinding
Y82_RS09985	COG2205	protein histidine kinase activity
Y82_RS09985	COG0784	Response regulator, receiver
Y82_RS10000	COG4772	TonB-dependent receptor
Y82_RS10015	COG2076	Multidrug Resistance protein
Y82_RS10020	COG0385	Bile acid
Y82_RS10070	COG2200	EAL domain
Y82_RS10080	COG3321	synthase
Y82_RS10080	COG0604	alcohol dehydrogenase
Y82_RS10085	COG0560	Phosphoserine phosphatase
Y82_RS10100	COG1176	ABC-type spermidine putrescine transport system, permease component I
Y82_RS10130	COG0564	pseudouridine synthase activity
Y82_RS10140	COG2894	cell division
Y82_RS10150	COG1560	Kdo2-lipid A biosynthetic process
Y82_RS10165	COG2853	Lipoprotein
Y82_RS10185	COG3162	membrane
Y82_RS10190	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Y82_RS10225	COG1132	(ABC) transporter
Y82_RS10235	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Y82_RS10260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Y82_RS10275	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Y82_RS10275	COG0438	transferase activity, transferring glycosyl groups
Y82_RS10305	COG1127	ABC transporter
Y82_RS10310	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Y82_RS10315	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Y82_RS10320	COG0727	PFAM Uncharacterised protein family (UPF0153)
Y82_RS10325	COG0778	Nitroreductase
Y82_RS10345	COG0745	RESPONSE REGULATOR receiver
Y82_RS10355	COG2350	Protein conserved in bacteria
Y82_RS10365	COG0613	PHP domain protein
Y82_RS10370	COG0009	L-threonylcarbamoyladenylate synthase
Y82_RS10375	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Y82_RS10380	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Y82_RS10430	COG1175	transmembrane transport
Y82_RS10435	COG0395	ABC-type sugar transport system, permease component
Y82_RS10440	COG3842	ATPase activity
Y82_RS10455	COG0676	glucose-6-phosphate 1-epimerase activity
Y82_RS10495	COG0786	glutamate:sodium symporter activity
Y82_RS10510	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS10525	COG0402	S-adenosylhomocysteine deaminase activity
Y82_RS10555	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Y82_RS10585	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Y82_RS10590	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Y82_RS10595	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
Y82_RS10600	COG2089	acid synthase
Y82_RS10610	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Y82_RS10620	COG1083	cytidylyl-transferase
Y82_RS10625	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS10645	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Y82_RS10655	COG1086	Polysaccharide biosynthesis protein
Y82_RS10680	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Y82_RS10720	COG0583	DNA-binding transcription factor activity
Y82_RS10755	COG0596	Alpha beta hydrolase
Y82_RS10760	COG0800	Aldolase
Y82_RS10775	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS10795	COG0583	DNA-binding transcription factor activity
Y82_RS10800	COG0251	oxidation-reduction process
Y82_RS10820	COG2226	methyltransferase
Y82_RS10860	COG0285	dihydrofolate synthase activity
Y82_RS10865	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Y82_RS10870	COG1286	toxin biosynthetic process
Y82_RS10970	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS10970	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS10995	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Y82_RS11005	COG3139	Protein of unknown function (DUF1315)
Y82_RS11015	COG0308	aminopeptidase N
Y82_RS11050	COG0745	RESPONSE REGULATOR receiver
Y82_RS11085	COG0714	Associated with various cellular activities
Y82_RS11105	COG1335	isochorismatase
Y82_RS11115	COG2342	PFAM TM1410 hypothetical-related protein
Y82_RS11140	COG0297	glycogen (starch) synthase activity
Y82_RS11190	COG3130	regulation of translation
Y82_RS11205	COG2027	D-alanyl-D-alanine carboxypeptidase
Y82_RS11210	COG3171	Protein conserved in bacteria
Y82_RS11215	COG2197	response regulator
Y82_RS11220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS11220	COG2205	protein histidine kinase activity
Y82_RS11250	COG0004	ammonium transporteR
Y82_RS11260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Y82_RS11270	COG0625	glutathione transferase activity
Y82_RS11275	COG1309	transcriptional regulator
Y82_RS11305	COG0521	Mo-molybdopterin cofactor biosynthetic process
Y82_RS11325	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Y82_RS11330	COG1070	Carbohydrate kinase
Y82_RS11350	COG0741	lytic transglycosylase activity
Y82_RS11355	COG0488	(ABC) transporter
Y82_RS11365	COG0589	response to stress
Y82_RS11445	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
Y82_RS11455	COG1113	amino acid transport
Y82_RS11490	COG1477	protein flavinylation
Y82_RS11505	COG0584	glycerophosphoryl diester phosphodiesterase
Y82_RS11520	COG4591	ABC-type transport system involved in lipoprotein release permease component
Y82_RS11540	COG2333	competence protein COMEC
Y82_RS11540	COG0658	competence protein
Y82_RS11545	COG0811	peptide transport
Y82_RS11550	COG0848	biopolymer transport protein
Y82_RS11570	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Y82_RS11580	COG1530	ribonuclease E activity
Y82_RS11595	COG0546	phosphoglycolate phosphatase activity
Y82_RS11600	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Y82_RS11600	COG0616	signal peptide processing
Y82_RS11610	COG1399	metal-binding, possibly nucleic acid-binding protein
Y82_RS11640	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Y82_RS11650	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Y82_RS11670	COG0084	hydrolase, TatD family'
Y82_RS11755	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
Y82_RS11770	COG0183	Belongs to the thiolase family
Y82_RS11785	COG2233	PERMEase
Y82_RS11810	COG2814	Major facilitator Superfamily
Y82_RS11815	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS11820	COG1309	transcriptional regulator
Y82_RS11855	COG4160	amino acid transport
Y82_RS11860	COG4215	(ABC) transporter
Y82_RS11865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS11870	COG1473	amidohydrolase
Y82_RS11875	COG0583	DNA-binding transcription factor activity
Y82_RS11880	COG0840	transmembrane signaling receptor activity
Y82_RS11910	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Y82_RS11920	COG1120	ATPase activity
Y82_RS11950	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Y82_RS11980	COG3047	cAMP biosynthetic process
Y82_RS11980	COG2885	chlorophyll binding
Y82_RS11985	COG2197	response regulator
Y82_RS11995	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Y82_RS12000	COG1595	DNA-templated transcription, initiation
Y82_RS12015	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS12030	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
Y82_RS12035	COG1960	acyl-CoA dehydrogenase activity
Y82_RS12040	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Y82_RS12055	COG1309	transcriptional regulator
Y82_RS12085	COG0583	DNA-binding transcription factor activity
Y82_RS12095	COG0583	DNA-binding transcription factor activity
Y82_RS12105	COG0714	Associated with various cellular activities
Y82_RS12150	COG0084	hydrolase, TatD family'
Y82_RS12155	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
Y82_RS12160	COG2259	Doxx family
Y82_RS12175	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
Y82_RS12190	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
Y82_RS12195	COG4181	ATPase activity
Y82_RS12235	COG1764	response to oxidative stress
Y82_RS12240	COG1846	Transcriptional regulator
Y82_RS12245	COG0583	DNA-binding transcription factor activity
Y82_RS12255	COG0583	DNA-binding transcription factor activity
Y82_RS12265	COG3214	Protein conserved in bacteria
Y82_RS12270	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
Y82_RS12280	COG1024	Enoyl-CoA hydratase
Y82_RS12290	COG3384	dioxygenase
Y82_RS12330	COG2866	Carboxypeptidase
Y82_RS12345	COG0436	Aminotransferase
Y82_RS12355	COG0386	Belongs to the glutathione peroxidase family
Y82_RS12360	COG1846	Transcriptional regulator
Y82_RS12365	COG2205	protein histidine kinase activity
Y82_RS12365	COG5002	protein histidine kinase activity
Y82_RS12365	COG0784	Response regulator, receiver
Y82_RS12370	COG2255	four-way junction helicase activity
Y82_RS12375	COG1956	GAF domain-containing protein
Y82_RS12380	COG0625	glutathione transferase activity
Y82_RS12405	COG2200	EAL domain
Y82_RS12430	COG0625	glutathione transferase activity
Y82_RS12435	COG1131	(ABC) transporter
Y82_RS12440	COG0842	Transport permease protein
Y82_RS12485	COG2188	Transcriptional regulator
Y82_RS12495	COG2853	Lipoprotein
Y82_RS12505	COG0745	RESPONSE REGULATOR receiver
Y82_RS12525	COG1335	isochorismatase
Y82_RS12580	COG3655	Transcriptional regulator
Y82_RS12620	COG2116	formate transmembrane transporter activity
Y82_RS12625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS12680	COG1051	belongs to the nudix hydrolase family
Y82_RS12690	COG1024	Enoyl-CoA hydratase
Y82_RS12690	COG1250	3-hydroxyacyl-CoA dehydrogenase
Y82_RS12700	COG2837	iron assimilation
Y82_RS12785	COG1238	metal cluster binding
Y82_RS12795	COG1295	ribonuclease BN
Y82_RS12825	COG0024	Methionine aminopeptidase
Y82_RS12910	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
Y82_RS12915	COG0732	type I restriction modification DNA specificity domain
Y82_RS12935	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Y82_RS12940	COG1401	restriction endodeoxyribonuclease activity
Y82_RS12950	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
Y82_RS12975	COG4372	Transposase
Y82_RS12995	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
Y82_RS12995	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
Y82_RS13040	COG0789	Transcriptional regulator
Y82_RS13050	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS13050	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS13055	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
Y82_RS13060	COG0243	molybdopterin cofactor binding
Y82_RS13085	COG1280	lysine exporter protein (LysE YggA)
Y82_RS13100	COG0542	response to heat
Y82_RS13175	COG1607	acyl-coa hydrolase
Y82_RS13180	COG1959	2 iron, 2 sulfur cluster binding
Y82_RS13190	COG2819	hydrolase of the alpha beta superfamily
Y82_RS13235	COG0583	DNA-binding transcription factor activity
Y82_RS13245	COG4106	trans-aconitate 2-methyltransferase activity
Y82_RS13255	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Y82_RS13260	COG1459	type II secretion system
Y82_RS13270	COG2165	general secretion pathway protein
Y82_RS13310	COG0720	synthase
Y82_RS13315	COG3604	Transcriptional regulator
Y82_RS13375	COG0840	transmembrane signaling receptor activity
Y82_RS13380	COG2056	Na+-H+ antiporter family
Y82_RS13400	COG2226	methyltransferase
Y82_RS13500	COG2153	protein acetylation
Y82_RS13505	COG2850	peptidyl-arginine hydroxylation
Y82_RS13545	COG1278	Cold shock
Y82_RS13555	COG0542	response to heat
Y82_RS13560	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Y82_RS13575	COG0492	ferredoxin-NADP+ reductase activity
Y82_RS13590	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Y82_RS13605	COG0435	Glutathione S-transferase
Y82_RS13610	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Y82_RS13615	COG2920	part of a sulfur-relay system
Y82_RS13655	COG0583	DNA-binding transcription factor activity
Y82_RS13660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS13665	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS13675	COG1960	acyl-CoA dehydrogenase activity
Y82_RS13680	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS13690	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS13705	COG2197	response regulator
Y82_RS13755	COG0582	viral genome integration into host DNA
Y82_RS13770	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS13795	COG1396	sequence-specific DNA binding
Y82_RS13805	COG4372	Transposase
Y82_RS13820	COG0583	DNA-binding transcription factor activity
Y82_RS13860	COG2132	Multicopper oxidase
Y82_RS13865	COG0745	RESPONSE REGULATOR receiver
Y82_RS13870	COG5002	protein histidine kinase activity
Y82_RS13890	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
Y82_RS13895	COG0789	Transcriptional regulator
Y82_RS13900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Y82_RS13905	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Y82_RS13910	COG1309	transcriptional regulator
Y82_RS13915	COG0300	oxidoreductase activity
Y82_RS13935	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Y82_RS13955	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
Y82_RS13960	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Y82_RS13970	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Y82_RS13985	COG2217	Heavy metal translocating P-type atpase
Y82_RS13990	COG2326	polyphosphate kinase activity
Y82_RS14020	COG0789	Transcriptional regulator
Y82_RS14090	COG2003	Belongs to the UPF0758 family
Y82_RS14145	COG3311	Transcriptional regulator
Y82_RS14150	COG1569	PIN domain
Y82_RS14220	COG0640	Transcriptional regulator
Y82_RS14230	COG0798	PFAM Bile acid sodium symporter
Y82_RS14235	COG1393	Belongs to the ArsC family
Y82_RS14240	COG0431	NADPH-dependent FMN reductase
Y82_RS14330	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Y82_RS14340	COG0789	Transcriptional regulator
Y82_RS14360	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Y82_RS14365	COG0629	single-stranded DNA binding
Y82_RS14425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS14425	COG2198	Histidine kinase
Y82_RS14425	COG2205	protein histidine kinase activity
Y82_RS14425	COG0784	Response regulator, receiver
Y82_RS14445	COG2249	NAD(P)H dehydrogenase (quinone) activity
Y82_RS14460	COG1522	sequence-specific DNA binding
Y82_RS14490	COG4191	Histidine kinase
Y82_RS14515	COG2203	Gaf domain
Y82_RS14515	COG3706	GGDEF domain
Y82_RS14515	COG4251	negative regulation of phosphorylation
Y82_RS14515	COG5001	Diguanylate cyclase
Y82_RS14540	COG0659	secondary active sulfate transmembrane transporter activity
Y82_RS14575	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS14585	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Y82_RS14595	COG0183	Belongs to the thiolase family
Y82_RS14600	COG1960	acyl-CoA dehydrogenase activity
Y82_RS14650	COG0729	surface antigen
Y82_RS14660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Y82_RS14665	COG2267	carboxylic ester hydrolase activity
Y82_RS14670	COG0671	phosphoesterase, PA-phosphatase related
Y82_RS14670	COG2453	phosphatase
Y82_RS14685	COG4589	Belongs to the CDS family
Y82_RS14690	COG0667	Aldo Keto reductase
Y82_RS14700	COG1115	amino acid carrier protein
Y82_RS14710	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Y82_RS14740	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS14745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS14750	COG1538	Outer membrane efflux protein
Y82_RS14810	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Y82_RS14810	COG0543	2 iron, 2 sulfur cluster binding
Y82_RS14815	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Y82_RS14820	COG4638	Rieske (2fe-2S)
Y82_RS14845	COG4948	Mandelate Racemase Muconate Lactonizing
Y82_RS14855	COG3485	protocatechuate 3,4-dioxygenase
Y82_RS14895	COG2807	transmembrane transport
Y82_RS14900	COG0590	tRNA wobble adenosine to inosine editing
Y82_RS14915	COG2318	DinB family
Y82_RS14985	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS14990	COG2863	cytochrome
Y82_RS14995	COG3258	Cytochrome c
Y82_RS15000	COG0642	Histidine kinase
Y82_RS15035	COG0625	glutathione transferase activity
Y82_RS15055	COG0583	DNA-binding transcription factor activity
Y82_RS15060	COG1595	DNA-templated transcription, initiation
Y82_RS15065	COG3712	iron ion homeostasis
Y82_RS15090	COG3210	domain, Protein
Y82_RS15155	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Y82_RS15165	COG2382	esterase
Y82_RS15185	COG0583	DNA-binding transcription factor activity
Y82_RS15210	COG1760	l-serine dehydratase
Y82_RS15215	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Y82_RS15250	COG2217	Heavy metal translocating P-type atpase
Y82_RS15265	COG0583	DNA-binding transcription factor activity
Y82_RS15285	COG1566	PFAM secretion protein HlyD family protein
Y82_RS15340	COG1335	isochorismatase
Y82_RS15350	COG0583	DNA-binding transcription factor activity
Y82_RS15390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Y82_RS15395	COG1121	(ABC) transporter
Y82_RS15490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS15515	COG0735	belongs to the Fur family
Y82_RS15525	COG1304	FMN binding
Y82_RS15555	COG4566	intracellular signal transduction
Y82_RS15645	COG3829	transcription factor binding
Y82_RS15670	COG3829	transcription factor binding
Y82_RS15675	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Y82_RS15680	COG0584	glycerophosphoryl diester phosphodiesterase
Y82_RS15685	COG2011	ABC-type metal ion transport system permease component
Y82_RS15695	COG1464	Belongs to the NlpA lipoprotein family
Y82_RS15725	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Y82_RS15730	COG1070	Carbohydrate kinase
Y82_RS15735	COG0246	Mannitol dehydrogenase
Y82_RS15750	COG1175	transmembrane transport
Y82_RS15770	COG4771	TonB-dependent receptor
Y82_RS15785	COG1917	Cupin 2, conserved barrel domain protein
Y82_RS15785	COG4977	sequence-specific DNA binding
Y82_RS15800	COG1116	anion transmembrane transporter activity
Y82_RS15805	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
Y82_RS15810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS15830	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS15845	COG3265	gluconokinase activity
Y82_RS15850	COG1609	Transcriptional regulator
Y82_RS15860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS15865	COG0583	DNA-binding transcription factor activity
Y82_RS15885	COG1396	sequence-specific DNA binding
Y82_RS15895	COG2175	clavaminate synthase activity
Y82_RS15905	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
Y82_RS15910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS15935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Y82_RS15935	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
Y82_RS15945	COG3469	chitinase activity
Y82_RS15950	COG2188	Transcriptional regulator
Y82_RS15955	COG1053	succinate dehydrogenase
Y82_RS15970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
Y82_RS16005	COG4772	TonB-dependent receptor
Y82_RS16050	COG0431	NADPH-dependent FMN reductase
Y82_RS16055	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Y82_RS16065	COG0640	Transcriptional regulator
Y82_RS16070	COG2207	Transcriptional regulator
Y82_RS16075	COG1064	alcohol dehydrogenase
Y82_RS16100	COG1309	transcriptional regulator
Y82_RS16110	COG2329	Antibiotic biosynthesis monooxygenase
Y82_RS16145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Y82_RS16155	COG1609	Transcriptional regulator
Y82_RS16190	COG0252	asparaginase activity
Y82_RS16195	COG1115	amino acid carrier protein
Y82_RS16240	COG1053	succinate dehydrogenase
Y82_RS16250	COG0728	peptidoglycan biosynthetic process
Y82_RS16320	COG4644	lycopene metabolic process
Y82_RS16410	COG1476	TRANSCRIPTIONal
Y82_RS16460	COG1476	TRANSCRIPTIONal
Y82_RS16510	COG1476	TRANSCRIPTIONal
Y82_RS16565	COG1476	TRANSCRIPTIONal
Y82_RS16660	COG1476	TRANSCRIPTIONal
Y82_RS16740	COG4372	Transposase
Y82_RS16750	COG2508	Transcriptional regulator
Y82_RS16760	COG4447	cellulose binding
Y82_RS16765	COG2409	Drug exporters of the RND superfamily
Y82_RS16785	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS16800	COG2072	flavoprotein involved in K transport
Y82_RS16815	COG0531	amino acid
Y82_RS16820	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS16825	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Y82_RS16840	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Y82_RS16845	COG3162	membrane
Y82_RS16855	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS16885	COG3008	intermembrane lipid transfer
Y82_RS16890	COG2995	paraquat-inducible protein a
Y82_RS16895	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS16955	COG2323	membrane
Y82_RS16975	COG3121	Chaperone
Y82_RS16985	COG3188	usher protein
Y82_RS16990	COG3121	Chaperone
Y82_RS17000	COG3969	phosphoadenosine phosphosulfate
Y82_RS17010	COG1475	DNA binding
Y82_RS17015	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS17020	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Y82_RS17025	COG0583	DNA-binding transcription factor activity
Y82_RS17060	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Y82_RS17060	COG2169	Transcriptional regulator
Y82_RS17080	COG0583	DNA-binding transcription factor activity
Y82_RS17085	COG2814	Major facilitator Superfamily
Y82_RS17105	COG1984	allophanate hydrolase subunit 2
Y82_RS17115	COG0028	Belongs to the TPP enzyme family
Y82_RS17125	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Y82_RS17130	COG1045	serine acetyltransferase
Y82_RS17135	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Y82_RS17155	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Y82_RS17160	COG0300	oxidoreductase activity
Y82_RS17200	COG2814	Major facilitator Superfamily
Y82_RS17210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS17230	COG0596	Alpha beta hydrolase
Y82_RS17235	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
Y82_RS17240	COG0367	asparagine synthase
Y82_RS17250	COG1522	sequence-specific DNA binding
Y82_RS17270	COG1113	amino acid transport
Y82_RS17275	COG2010	Cytochrome c
Y82_RS17280	COG2010	Cytochrome c
Y82_RS17300	COG3153	acetyltransferase
Y82_RS17300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Y82_RS17305	COG5001	Diguanylate cyclase
Y82_RS17315	COG4206	TonB-dependent receptor
Y82_RS17325	COG2192	nodulation
Y82_RS17330	COG2814	Major facilitator Superfamily
Y82_RS17365	COG1104	cysteine desulfurase activity
Y82_RS17370	COG4172	Belongs to the ABC transporter superfamily
Y82_RS17380	COG4174	ABC transporter (Permease)
Y82_RS17390	COG4771	TonB-dependent receptor
Y82_RS17405	COG0583	DNA-binding transcription factor activity
Y82_RS17425	COG1595	DNA-templated transcription, initiation
Y82_RS17440	COG2207	Transcriptional regulator
Y82_RS17460	COG0564	pseudouridine synthase activity
Y82_RS17475	COG0531	amino acid
Y82_RS17480	COG0174	glutamine synthetase
Y82_RS17495	COG0028	Belongs to the TPP enzyme family
Y82_RS17510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Y82_RS17535	COG1522	sequence-specific DNA binding
Y82_RS17575	COG1309	transcriptional regulator
Y82_RS17580	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS17585	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS17595	COG3204	pilus organization
Y82_RS17600	COG0789	Transcriptional regulator
Y82_RS17605	COG1960	acyl-CoA dehydrogenase activity
Y82_RS17610	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
Y82_RS17640	COG0179	Fumarylacetoacetate (FAA) hydrolase
Y82_RS17650	COG2271	Major facilitator Superfamily
Y82_RS17655	COG3829	transcription factor binding
Y82_RS17655	COG3290	protein histidine kinase activity
Y82_RS17660	COG2610	gluconate transmembrane transporter activity
Y82_RS17665	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS17670	COG2031	fatty acid transporter
Y82_RS17685	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
Y82_RS17690	COG0583	DNA-binding transcription factor activity
Y82_RS17695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Y82_RS17700	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS17720	COG5002	protein histidine kinase activity
Y82_RS17785	COG3851	Histidine kinase
Y82_RS17800	COG0784	Response regulator, receiver
Y82_RS17800	COG2205	protein histidine kinase activity
Y82_RS17820	COG2194	sulfuric ester hydrolase activity
Y82_RS17865	COG0488	(ABC) transporter
Y82_RS17880	COG0583	DNA-binding transcription factor activity
Y82_RS17885	COG1278	Cold shock
Y82_RS17935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Y82_RS17940	COG1609	Transcriptional regulator
Y82_RS17945	COG1172	Belongs to the binding-protein-dependent transport system permease family
Y82_RS17950	COG1129	ABC transporter
Y82_RS17980	COG2010	Cytochrome c
Y82_RS17985	COG0753	catalase activity
Y82_RS18000	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Y82_RS18005	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
Y82_RS18010	COG2080	2 iron, 2 sulfur cluster binding
Y82_RS18035	COG1944	ATP diphosphatase activity
Y82_RS18055	COG4771	TonB-dependent receptor
Y82_RS18060	COG0275	rRNA processing
Y82_RS18065	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Y82_RS18065	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Y82_RS18080	COG0579	oxidoreductase
Y82_RS18110	COG1595	DNA-templated transcription, initiation
Y82_RS18115	COG3712	iron ion homeostasis
Y82_RS18135	COG2814	Major facilitator Superfamily
Y82_RS18185	COG2197	response regulator
Y82_RS18210	COG2366	antibiotic biosynthetic process
Y82_RS18225	COG0625	glutathione transferase activity
Y82_RS18240	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Y82_RS18245	COG0417	DNA replication proofreading
Y82_RS18290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS18360	COG1309	transcriptional regulator
Y82_RS18380	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Y82_RS18385	COG0583	DNA-binding transcription factor activity
Y82_RS18395	COG2354	Protein conserved in bacteria
Y82_RS18400	COG3278	Belongs to the heme-copper respiratory oxidase family
Y82_RS18410	COG2239	Acts as a magnesium transporter
Y82_RS18425	COG4251	negative regulation of phosphorylation
Y82_RS18425	COG5001	Diguanylate cyclase
Y82_RS18425	COG2203	Gaf domain
Y82_RS18425	COG3706	GGDEF domain
Y82_RS18435	COG4977	sequence-specific DNA binding
Y82_RS18440	COG3813	Protein conserved in bacteria
Y82_RS18505	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Y82_RS18530	COG0604	alcohol dehydrogenase
Y82_RS18535	COG0616	signal peptide processing
Y82_RS18555	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS18560	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS18565	COG0583	DNA-binding transcription factor activity
Y82_RS18590	COG1024	Enoyl-CoA hydratase
Y82_RS18600	COG0531	amino acid
Y82_RS18615	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
Y82_RS18635	COG0741	lytic transglycosylase activity
Y82_RS18635	COG1388	LysM domain
Y82_RS18640	COG4166	transmembrane transport
Y82_RS18645	COG4166	transmembrane transport
Y82_RS18650	COG4174	ABC transporter (Permease)
Y82_RS18655	COG4239	(ABC) transporter, permease
Y82_RS18660	COG4172	Belongs to the ABC transporter superfamily
Y82_RS18670	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS18685	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Y82_RS18710	COG0745	RESPONSE REGULATOR receiver
Y82_RS18715	COG2205	protein histidine kinase activity
Y82_RS18720	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Y82_RS18765	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Y82_RS18785	COG0589	response to stress
Y82_RS18810	COG3707	response regulator
Y82_RS18820	COG2223	nitrite transmembrane transporter activity
Y82_RS18825	COG0515	serine threonine protein kinase
Y82_RS18830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Y82_RS18835	COG2146	nitrite reductase [NAD(P)H] activity
Y82_RS18840	COG0243	molybdopterin cofactor binding
Y82_RS18860	COG0668	transmembrane transport
Y82_RS18900	COG4067	protein conserved in archaea
Y82_RS18900	COG0189	ligase activity
Y82_RS18945	COG2909	trisaccharide binding
Y82_RS18950	COG2909	trisaccharide binding
Y82_RS18985	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Y82_RS19040	COG0519	Catalyzes the synthesis of GMP from XMP
Y82_RS19055	COG0667	Aldo Keto reductase
Y82_RS19065	COG1024	Enoyl-CoA hydratase
Y82_RS19065	COG1250	3-hydroxyacyl-CoA dehydrogenase
Y82_RS19070	COG0183	Belongs to the thiolase family
Y82_RS19090	COG1305	Transglutaminase-like
Y82_RS19100	COG2308	Evidence 4 Homologs of previously reported genes of
Y82_RS19130	COG1317	bacterial-type flagellum organization
Y82_RS19240	COG4789	Type iii secretion
Y82_RS19290	COG4790	Type iii secretion
Y82_RS19295	COG4794	Type iii secretion
Y82_RS19300	COG4791	protein targeting
Y82_RS19305	COG4792	protein secretion
Y82_RS19385	COG2840	Smr protein MutS2
Y82_RS19405	COG0515	serine threonine protein kinase
Y82_RS19405	COG2815	serine threonine protein kinase
Y82_RS19445	COG2204	response regulator
Y82_RS19490	COG0625	glutathione transferase activity
Y82_RS19495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Y82_RS19510	COG3135	benzoate transporter
Y82_RS19520	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS19525	COG2130	NADP-dependent
Y82_RS19540	COG0840	transmembrane signaling receptor activity
Y82_RS19550	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Y82_RS19590	COG0745	RESPONSE REGULATOR receiver
Y82_RS19595	COG2205	protein histidine kinase activity
Y82_RS19620	COG1960	acyl-CoA dehydrogenase activity
Y82_RS19630	COG1024	Enoyl-CoA hydratase
Y82_RS19635	COG1250	3-hydroxyacyl-CoA dehydrogenase
Y82_RS19640	COG2186	Transcriptional regulator
Y82_RS19645	COG2807	transmembrane transport
Y82_RS19650	COG0628	permease
Y82_RS19660	COG0625	glutathione transferase activity
Y82_RS19690	COG1022	Amp-dependent synthetase and ligase
Y82_RS19720	COG5002	protein histidine kinase activity
Y82_RS19720	COG2205	protein histidine kinase activity
Y82_RS19720	COG0784	Response regulator, receiver
Y82_RS19760	COG1846	Transcriptional regulator
Y82_RS19770	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Y82_RS19770	COG2010	Cytochrome c
Y82_RS19775	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Y82_RS19775	COG2010	Cytochrome c
Y82_RS19780	COG2207	Transcriptional regulator
Y82_RS19855	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Y82_RS19860	COG1053	succinate dehydrogenase
Y82_RS19865	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
Y82_RS19870	COG2009	succinate dehydrogenase
Y82_RS19900	COG3846	protein secretion by the type IV secretion system
Y82_RS19915	COG3451	type IV secretory pathway VirB4
Y82_RS19925	COG3838	Conjugal transfer protein Trbc
Y82_RS19930	COG4962	Type ii secretion system protein e
Y82_RS19960	COG2076	Multidrug Resistance protein
Y82_RS19970	COG0583	DNA-binding transcription factor activity
Y82_RS20005	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Y82_RS20010	COG1127	ABC transporter
Y82_RS20035	COG4959	Type IV secretory pathway protease TraF
Y82_RS20085	COG5489	Protein of unknown function (DUF736)
Y82_RS20105	COG1475	DNA binding
Y82_RS20120	COG2003	Belongs to the UPF0758 family
Y82_RS20125	COG4804	nuclease activity
Y82_RS20155	COG2084	Dehydrogenase
Y82_RS20170	COG3738	Protein conserved in bacteria
Y82_RS20200	COG0251	oxidation-reduction process
Y82_RS20205	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS20215	COG0174	glutamine synthetase
Y82_RS20220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS20240	COG0840	transmembrane signaling receptor activity
Y82_RS20255	COG3278	Belongs to the heme-copper respiratory oxidase family
Y82_RS20270	COG2010	Cytochrome c
Y82_RS20275	COG3278	Belongs to the heme-copper respiratory oxidase family
Y82_RS20290	COG2010	Cytochrome c
Y82_RS20300	COG0348	domain, Protein
Y82_RS20310	COG2217	Heavy metal translocating P-type atpase
Y82_RS20350	COG2076	Multidrug Resistance protein
Y82_RS20380	COG1960	acyl-CoA dehydrogenase activity
Y82_RS20395	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Y82_RS20470	COG1196	nuclear chromosome segregation
Y82_RS20500	COG0402	S-adenosylhomocysteine deaminase activity
Y82_RS20505	COG1247	-acetyltransferase
Y82_RS20525	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Y82_RS20550	COG4372	Transposase
Y82_RS20570	COG2856	Zn peptidase
Y82_RS20575	COG0384	phenazine biosynthesis protein PhzF
Y82_RS20605	COG5006	permease, DMT superfamily
Y82_RS20620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Y82_RS20635	COG3795	YCII-related domain
Y82_RS20645	COG2814	Major facilitator Superfamily
Y82_RS20650	COG4941	Belongs to the sigma-70 factor family
Y82_RS20660	COG3795	YCII-related domain
Y82_RS20670	COG2197	response regulator
Y82_RS20675	COG1982	Orn Lys Arg decarboxylase major
Y82_RS20680	COG0189	ligase activity
Y82_RS20685	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS20700	COG0765	amino acid transport
Y82_RS20705	COG0765	amino acid transport
Y82_RS20710	COG1126	abc transporter atp-binding protein
Y82_RS20740	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS20760	COG1253	flavin adenine dinucleotide binding
Y82_RS20765	COG0300	oxidoreductase activity
Y82_RS20775	COG0583	DNA-binding transcription factor activity
Y82_RS20780	COG3591	Belongs to the peptidase S1B family
Y82_RS20780	COG1864	DNA RNA non-specific endonuclease
Y82_RS20785	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Y82_RS20790	COG4319	ketosteroid isomerase
Y82_RS20805	COG4774	siderophore transport
Y82_RS20875	COG0583	DNA-binding transcription factor activity
Y82_RS20885	COG0121	glutamine amidotransferase
Y82_RS20915	COG3712	iron ion homeostasis
Y82_RS20920	COG1595	DNA-templated transcription, initiation
Y82_RS20935	COG1230	cation diffusion facilitator family transporter
Y82_RS20940	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Y82_RS20970	COG2252	PERMEase
Y82_RS21030	COG2233	PERMEase
Y82_RS21045	COG1309	transcriptional regulator
Y82_RS21055	COG3960	tartronate-semialdehyde synthase activity
Y82_RS21060	COG3622	Belongs to the hyi family
Y82_RS21065	COG2084	Dehydrogenase
Y82_RS21075	COG0469	pyruvate kinase activity
Y82_RS21080	COG4413	Urea transporter
Y82_RS21085	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Y82_RS21100	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
Y82_RS21110	COG3192	ethanolamine utilization protein
Y82_RS21125	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS21130	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Y82_RS21205	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Y82_RS21215	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS21220	COG1496	oxidoreductase activity
Y82_RS21245	COG0835	chemotaxis
Y82_RS21255	COG1192	Involved in chromosome partitioning
Y82_RS21260	COG1360	Flagellar Motor Protein
Y82_RS21265	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Y82_RS21275	COG0784	Response regulator, receiver
Y82_RS21275	COG2198	Histidine kinase
Y82_RS21275	COG0643	Histidine kinase
Y82_RS21305	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Y82_RS21310	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
Y82_RS21330	COG1987	bacterial-type flagellum assembly
Y82_RS21370	COG2832	Protein of unknown function (DUF454)
Y82_RS21385	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS21390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS21400	COG3300	MHYT domain
Y82_RS21400	COG5001	Diguanylate cyclase
Y82_RS21435	COG0488	(ABC) transporter
Y82_RS21490	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Y82_RS21500	COG0583	DNA-binding transcription factor activity
Y82_RS21515	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
Y82_RS21530	COG3264	Mechanosensitive ion channel
Y82_RS21530	COG1196	nuclear chromosome segregation
Y82_RS21535	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
Y82_RS21535	COG0116	Belongs to the methyltransferase superfamily
Y82_RS21545	COG0210	DNA helicase
Y82_RS21570	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
Y82_RS21645	COG1960	acyl-CoA dehydrogenase activity
Y82_RS21665	COG0406	alpha-ribazole phosphatase activity
Y82_RS21695	COG0778	Nitroreductase
Y82_RS21710	COG4206	TonB-dependent receptor
Y82_RS21720	COG1802	Transcriptional regulator
Y82_RS21730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS21765	COG0477	Major facilitator Superfamily
Y82_RS21785	COG0765	amino acid transport
Y82_RS21795	COG1126	abc transporter atp-binding protein
Y82_RS21805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Y82_RS21810	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS21870	COG4191	Histidine kinase
Y82_RS21870	COG0784	Response regulator, receiver
Y82_RS21910	COG1289	transmembrane transporter activity
Y82_RS21925	COG2207	Transcriptional regulator
Y82_RS21945	COG2249	NAD(P)H dehydrogenase (quinone) activity
Y82_RS21950	COG2249	NAD(P)H dehydrogenase (quinone) activity
Y82_RS21960	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
Y82_RS21985	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Y82_RS21995	COG0318	PFAM AMP-dependent synthetase and ligase
Y82_RS22000	COG0367	asparagine synthase
Y82_RS22010	COG2211	Major facilitator Superfamily
Y82_RS22060	COG1335	isochorismatase
Y82_RS22065	COG0583	DNA-binding transcription factor activity
Y82_RS22075	COG0791	NLP P60 protein
Y82_RS22080	COG0791	NLP P60 protein
Y82_RS22090	COG3829	transcription factor binding
Y82_RS22105	COG2818	Glycosylase
Y82_RS22130	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Y82_RS22135	COG1960	acyl-CoA dehydrogenase activity
Y82_RS22140	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Y82_RS22145	COG0625	glutathione transferase activity
Y82_RS22170	COG5002	protein histidine kinase activity
Y82_RS22170	COG5001	Diguanylate cyclase
Y82_RS22170	COG3447	MASE1 domain protein
Y82_RS22190	COG4459	periplasmic nitrate reductase
Y82_RS22195	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
Y82_RS22195	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
Y82_RS22200	COG3062	negative regulation of establishment of protein localization
Y82_RS22210	COG3043	anaerobic respiration
Y82_RS22215	COG3005	denitrification pathway
Y82_RS22220	COG2951	lytic endotransglycosylase activity
Y82_RS22225	COG0861	Integral membrane protein TerC family
Y82_RS22230	COG0753	catalase activity
Y82_RS22250	COG2977	Belongs to the P-Pant transferase superfamily
Y82_RS22255	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
Y82_RS22270	COG2226	methyltransferase
Y82_RS22285	COG2205	protein histidine kinase activity
Y82_RS22290	COG0745	RESPONSE REGULATOR receiver
Y82_RS22295	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Y82_RS22295	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Y82_RS22300	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Y82_RS22370	COG0531	amino acid
Y82_RS22400	COG0583	DNA-binding transcription factor activity
Y82_RS22405	COG3257	ureidoglycine aminohydrolase activity
Y82_RS22420	COG0604	alcohol dehydrogenase
Y82_RS22420	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS22420	COG3321	synthase
Y82_RS22425	COG2197	response regulator
Y82_RS22465	COG0583	DNA-binding transcription factor activity
Y82_RS22470	COG0667	Aldo Keto reductase
Y82_RS22500	COG0242	peptide deformylase activity
Y82_RS22510	COG2199	diguanylate cyclase activity
Y82_RS22515	COG2885	chlorophyll binding
Y82_RS22545	COG1132	(ABC) transporter
Y82_RS22560	COG4628	conserved protein (DUF2132)
Y82_RS22565	COG2133	pyrroloquinoline quinone binding
Y82_RS22580	COG2207	Transcriptional regulator
Y82_RS22585	COG0477	Major facilitator Superfamily
Y82_RS22600	COG2882	bacterial-type flagellum organization
Y82_RS22660	COG1334	flagellar protein FlaG
Y82_RS22720	COG4787	bacterial-type flagellum-dependent cell motility
Y82_RS22730	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
Y82_RS22740	COG1815	bacterial-type flagellum-dependent cell motility
Y82_RS22790	COG0326	Molecular chaperone. Has ATPase activity
Y82_RS22805	COG3189	MarR family transcriptional regulator
Y82_RS22825	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Y82_RS22840	COG2212	antiporter activity
Y82_RS22845	COG1863	multisubunit Na H antiporter MnhE subunit
Y82_RS22850	COG0651	ATP synthesis coupled electron transport
Y82_RS22855	COG1006	Multisubunit Na H antiporter MnhC subunit
Y82_RS22860	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
Y82_RS22860	COG2111	Na H antiporter
Y82_RS22865	COG3133	Outer membrane lipoprotein
Y82_RS22875	COG1929	Belongs to the glycerate kinase type-1 family
Y82_RS22880	COG2610	gluconate transmembrane transporter activity
Y82_RS22885	COG3835	regulator
Y82_RS22895	COG2885	chlorophyll binding
Y82_RS22910	COG1199	ATP-dependent helicase activity
Y82_RS22950	COG2860	membrane
Y82_RS22965	COG0653	protein targeting
Y82_RS22970	COG0625	glutathione transferase activity
Y82_RS22995	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS23000	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS23025	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS23030	COG1960	acyl-CoA dehydrogenase activity
Y82_RS23035	COG1024	Enoyl-CoA hydratase
Y82_RS23040	COG1960	acyl-CoA dehydrogenase activity
Y82_RS23050	COG2814	Major facilitator Superfamily
Y82_RS23055	COG2030	dehydratase
Y82_RS23065	COG0183	Belongs to the thiolase family
Y82_RS23095	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Y82_RS23100	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
Y82_RS23115	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Y82_RS23125	COG0425	Belongs to the sulfur carrier protein TusA family
Y82_RS23180	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Y82_RS23185	COG3188	usher protein
Y82_RS23205	COG1051	belongs to the nudix hydrolase family
Y82_RS23275	COG2894	cell division
Y82_RS23405	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Y82_RS23420	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Y82_RS23445	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Y82_RS23600	COG1074	ATP-dependent DNA helicase activity
Y82_RS23740	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Y82_RS23805	COG4969	Belongs to the N-Me-Phe pilin family
Y82_RS23845	COG1047	Peptidyl-prolyl cis-trans
Y82_RS23860	COG0196	riboflavin kinase activity
Y82_RS23875	COG3045	CreA protein
Y82_RS23900	COG0142	geranyltranstransferase activity
Y82_RS23915	COG0545	Peptidyl-prolyl cis-trans isomerase
Y82_RS23935	COG1067	ATP-dependent peptidase activity
Y82_RS23960	COG4650	regulator
Y82_RS23975	COG1690	Belongs to the RtcB family
Y82_RS23980	COG3541	Predicted nucleotidyltransferase
Y82_RS24000	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Y82_RS24025	COG1136	(ABC) transporter
Y82_RS24025	COG0577	efflux transmembrane transporter activity
Y82_RS24030	COG0577	efflux transmembrane transporter activity
Y82_RS24030	COG1136	(ABC) transporter
Y82_RS24035	COG0488	(ABC) transporter
Y82_RS24055	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS24060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS24085	COG0523	cobalamin synthesis protein
Y82_RS24090	COG2879	small protein
Y82_RS24095	COG1966	Carbon starvation protein
Y82_RS24165	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
Y82_RS24165	COG3608	succinylglutamate desuccinylase aspartoacylase
Y82_RS24170	COG2010	Cytochrome c
Y82_RS24210	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Y82_RS24220	COG0833	amino acid
Y82_RS24225	COG2119	membrane
Y82_RS24240	COG0501	Belongs to the peptidase M48B family
Y82_RS24245	COG0840	transmembrane signaling receptor activity
Y82_RS24250	COG2135	peptidase activity
Y82_RS24255	COG1285	pathogenesis
Y82_RS24315	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
Y82_RS24370	COG1090	epimerase
Y82_RS24375	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
Y82_RS24385	COG0789	Transcriptional regulator
Y82_RS24405	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Y82_RS24460	COG0012	GTP binding
Y82_RS24465	COG0582	viral genome integration into host DNA
Y82_RS24525	COG3415	Transposase
Y82_RS24525	COG2801	Transposase and inactivated derivatives
Y82_RS24565	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Y82_RS24615	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
Y82_RS24755	COG0789	Transcriptional regulator
Y82_RS24765	COG2608	mercury ion transmembrane transporter activity
Y82_RS24770	COG2608	mercury ion transmembrane transporter activity
Y82_RS24775	COG0789	Transcriptional regulator
Y82_RS24785	COG1120	ATPase activity
Y82_RS24800	COG3586	endonuclease activity
Y82_RS24810	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Y82_RS24820	COG0583	DNA-binding transcription factor activity
Y82_RS24830	COG0464	growth
Y82_RS24880	COG0583	DNA-binding transcription factor activity
Y82_RS24895	COG0463	Glycosyl transferase, family 2
Y82_RS24900	COG0154	amidase activity
Y82_RS24920	COG0583	DNA-binding transcription factor activity
Y82_RS24930	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Y82_RS24965	COG2831	hemolysin activation secretion protein
Y82_RS25110	COG0420	3'-5' exonuclease activity
Y82_RS25120	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Y82_RS25125	COG1074	ATP-dependent DNA helicase activity
Y82_RS25130	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
Y82_RS25135	COG0095	Lipoate-protein ligase
Y82_RS25140	COG0697	spore germination
Y82_RS25155	COG0840	transmembrane signaling receptor activity
Y82_RS25165	COG0306	phosphate transporter
Y82_RS25225	COG4964	Belongs to the GSP D family
Y82_RS25245	COG0433	COG0433 Predicted ATPase
Y82_RS25285	COG0788	formyltetrahydrofolate deformylase activity
Y82_RS25295	COG2925	Exonuclease
Y82_RS25325	COG0714	Associated with various cellular activities
Y82_RS25355	COG0589	response to stress
Y82_RS25365	COG1024	Enoyl-CoA hydratase
Y82_RS25375	COG3706	GGDEF domain
Y82_RS25395	COG0693	protein deglycase activity
Y82_RS25410	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Y82_RS25425	COG0154	amidase activity
Y82_RS25435	COG1473	amidohydrolase
Y82_RS25450	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Y82_RS25455	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Y82_RS25455	COG0426	domain, Protein
Y82_RS25475	COG0589	response to stress
Y82_RS25490	COG2814	Major facilitator Superfamily
Y82_RS25495	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS25510	COG1918	ferrous iron import across plasma membrane
Y82_RS25525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Y82_RS25565	COG1704	LemA family
Y82_RS25590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS25595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Y82_RS25610	COG3642	lipopolysaccharide core region biosynthetic process
Y82_RS25620	COG2205	protein histidine kinase activity
Y82_RS25625	COG0745	RESPONSE REGULATOR receiver
Y82_RS25660	COG3030	protein affecting phage T7 exclusion by the F plasmid
Y82_RS25670	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS25695	COG0668	transmembrane transport
Y82_RS25705	COG0745	RESPONSE REGULATOR receiver
Y82_RS25720	COG2096	Adenosyltransferase
Y82_RS25725	COG0494	nUDIX hydrolase
Y82_RS25750	COG0741	lytic transglycosylase activity
Y82_RS25750	COG1196	nuclear chromosome segregation
Y82_RS25750	COG0739	heme binding
Y82_RS25805	COG4396	Host-nuclease inhibitor protein Gam
Y82_RS25900	COG4383	Mu-like prophage protein gp29
Y82_RS25905	COG2369	cell adhesion
Y82_RS25910	COG5005	Phage virion morphogenesis
Y82_RS25935	COG4397	Mu-like prophage major head subunit gpT
Y82_RS26085	COG2369	cell adhesion
Y82_RS26095	COG4373	Mu-like prophage FluMu protein gp28
Y82_RS26180	COG0488	(ABC) transporter
Y82_RS26330	COG0772	Belongs to the SEDS family
Y82_RS26345	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Y82_RS26385	COG3107	peptidoglycan biosynthetic process
Y82_RS26400	COG2823	Periplasmic or secreted lipoprotein
Y82_RS26405	COG2969	positive regulation of protein catabolic process
Y82_RS26410	COG0625	glutathione transferase activity
Y82_RS26415	COG2857	Cytochrome c1
Y82_RS26420	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Y82_RS26425	COG0723	plastoquinol--plastocyanin reductase activity
Y82_RS26440	COG0667	Aldo Keto reductase
Y82_RS26445	COG1960	acyl-CoA dehydrogenase activity
Y82_RS26460	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Y82_RS26470	COG2945	thiolester hydrolase activity
Y82_RS26490	COG2951	lytic endotransglycosylase activity
Y82_RS26500	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Y82_RS26540	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
Y82_RS26545	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Y82_RS26550	COG1127	ABC transporter
Y82_RS26560	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Y82_RS26575	COG1137	ATPase activity
Y82_RS26605	COG4974	Belongs to the 'phage' integrase family
Y82_RS26670	COG4695	Portal protein
Y82_RS26730	COG3772	lysozyme
Y82_RS26830	COG0312	modulator of DNA gyrase
Y82_RS26840	COG0312	modulator of DNA gyrase
Y82_RS26845	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Y82_RS26855	COG1530	ribonuclease E activity
Y82_RS26870	COG1792	Involved in formation and maintenance of cell shape
Y82_RS26875	COG1077	Cell shape determining protein MreB Mrl
Y82_RS26895	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Y82_RS26900	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Y82_RS26905	COG4676	Protein conserved in bacteria
Y82_RS26910	COG5445	Predicted secreted protein (DUF2300)
Y82_RS26925	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
Y82_RS26930	COG4676	Protein conserved in bacteria
Y82_RS26935	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
Y82_RS26950	COG0747	negative chemotaxis
Y82_RS26955	COG0747	negative chemotaxis
Y82_RS26970	COG0747	negative chemotaxis
Y82_RS26985	COG0747	negative chemotaxis
Y82_RS26990	COG0601	transmembrane transport
Y82_RS26995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Y82_RS27000	COG0444	Belongs to the ABC transporter superfamily
Y82_RS27005	COG4608	Belongs to the ABC transporter superfamily
Y82_RS27020	COG1984	allophanate hydrolase subunit 2
Y82_RS27040	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Y82_RS27045	COG4774	siderophore transport
Y82_RS27060	COG2194	sulfuric ester hydrolase activity
Y82_RS27070	COG0019	diaminopimelate decarboxylase activity
Y82_RS27175	COG1252	NADH dehydrogenase
Y82_RS27180	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
Y82_RS27195	COG1192	Involved in chromosome partitioning
Y82_RS27340	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Y82_RS27355	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Y82_RS27365	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
Y82_RS27370	COG3657	addiction module killer protein
Y82_RS27395	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Y82_RS27555	COG1074	ATP-dependent DNA helicase activity
Y82_RS27675	COG3609	addiction module antidote protein, CC2985 family
Y82_RS27695	COG3328	transposase activity
Y82_RS27705	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
Y82_RS27720	COG0602	queuosine metabolic process
Y82_RS27725	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
Y82_RS27755	COG0824	Thioesterase
Y82_RS27785	COG0783	Belongs to the Dps family
Y82_RS27830	COG3118	belongs to the thioredoxin family
Y82_RS27865	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Y82_RS27885	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Y82_RS27925	COG3122	Protein conserved in bacteria
Y82_RS27935	COG3956	TIGRFAM MazG family protein
Y82_RS27940	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Y82_RS27970	COG5002	protein histidine kinase activity
Y82_RS27970	COG2205	protein histidine kinase activity
Y82_RS27970	COG0784	Response regulator, receiver
Y82_RS27975	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Y82_RS28025	COG3038	cytochrome b561
Y82_RS28045	COG4807	Protein conserved in bacteria
Y82_RS28055	COG2239	Acts as a magnesium transporter
Y82_RS28125	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
Y82_RS28220	COG2301	Belongs to the HpcH HpaI aldolase family
Y82_RS28230	COG2079	MmgE PrpD family protein
Y82_RS28240	COG1960	acyl-CoA dehydrogenase activity
Y82_RS28245	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
Y82_RS28250	COG0583	DNA-binding transcription factor activity
Y82_RS28255	COG0583	DNA-binding transcription factor activity
Y82_RS28315	COG1113	amino acid transport
Y82_RS28335	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS28335	COG3321	synthase
Y82_RS28335	COG0604	alcohol dehydrogenase
Y82_RS28345	COG5001	Diguanylate cyclase
Y82_RS28345	COG5002	protein histidine kinase activity
Y82_RS28365	COG0271	Belongs to the BolA IbaG family
Y82_RS28405	COG0492	ferredoxin-NADP+ reductase activity
Y82_RS28410	COG0450	alkyl hydroperoxide reductase
Y82_RS28455	COG1309	transcriptional regulator
Y82_RS28460	COG0386	Belongs to the glutathione peroxidase family
Y82_RS28485	COG0204	Acyl-transferase
Y82_RS28490	COG2885	chlorophyll binding
Y82_RS28495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Y82_RS28525	COG2267	carboxylic ester hydrolase activity
Y82_RS28570	COG4735	regulation of single-species biofilm formation
Y82_RS28575	COG4735	regulation of single-species biofilm formation
Y82_RS28610	COG4372	Transposase
Y82_RS28620	COG4372	Transposase
Y82_RS28685	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
Y82_RS28715	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Y82_RS28730	COG0546	phosphoglycolate phosphatase activity
Y82_RS28745	COG3023	N-Acetylmuramoyl-L-alanine amidase
Y82_RS28760	COG0656	L-ascorbic acid biosynthetic process
Y82_RS28785	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Y82_RS28795	COG1802	Transcriptional regulator
Y82_RS28805	COG0372	Belongs to the citrate synthase family
Y82_RS28820	COG2079	MmgE PrpD family protein
Y82_RS28835	COG1113	amino acid transport
Y82_RS28865	COG0583	DNA-binding transcription factor activity
Y82_RS28870	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Y82_RS28880	COG4206	TonB-dependent receptor
Y82_RS28890	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Y82_RS28955	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Y82_RS29035	COG3180	Ammonia monooxygenase
Y82_RS29045	COG2720	vancomycin resistance protein
Y82_RS29060	COG1960	acyl-CoA dehydrogenase activity
Y82_RS29065	COG1024	Enoyl-CoA hydratase
Y82_RS29085	COG2910	NAD(P)H-binding
Y82_RS29090	COG2015	COG2015, Alkyl sulfatase and related hydrolases
Y82_RS29160	COG0582	viral genome integration into host DNA
Y82_RS29210	COG0629	single-stranded DNA binding
Y82_RS29215	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Y82_RS29380	COG2003	Belongs to the UPF0758 family
Y82_RS29490	COG0789	Transcriptional regulator
Y82_RS29520	COG3549	Plasmid maintenance system killer
Y82_RS29535	COG0288	reversible hydration of carbon dioxide
Y82_RS29545	COG0456	acetyltransferase
Y82_RS29590	COG1840	ABC-type Fe3 transport system, periplasmic component
Y82_RS29595	COG1178	ABC-type Fe3 transport system permease component
Y82_RS29600	COG3008	intermembrane lipid transfer
Y82_RS29605	COG2995	paraquat-inducible protein a
Y82_RS29610	COG2995	paraquat-inducible protein a
Y82_RS29650	COG1183	phosphatidylcholine synthase activity
Y82_RS29665	COG0028	Belongs to the TPP enzyme family
Y82_RS29675	COG3098	single-species biofilm formation
Y82_RS29685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Y82_RS29720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Y82_RS29725	COG4558	Periplasmic binding protein
Y82_RS29730	COG3720	iron ion transport
Y82_RS29735	COG4771	TonB-dependent receptor
Y82_RS29760	COG0436	Aminotransferase
Y82_RS29770	COG2321	neutral zinc metallopeptidase
Y82_RS29780	COG2252	PERMEase
Y82_RS29795	COG0436	Aminotransferase
Y82_RS29800	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Y82_RS29815	COG4191	Histidine kinase
Y82_RS29920	COG0195	Participates in both transcription termination and antitermination
Y82_RS29955	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
Y82_RS30025	COG0497	DNA recombination
Y82_RS30055	COG2186	Transcriptional regulator
Y82_RS30060	COG1620	l-lactate permease
Y82_RS30110	COG0697	spore germination
Y82_RS30130	COG0697	spore germination
Y82_RS30135	COG1522	sequence-specific DNA binding
Y82_RS30145	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS30165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Y82_RS30195	COG0509	glycine decarboxylation via glycine cleavage system
Y82_RS30235	COG0531	amino acid
Y82_RS30250	COG3276	selenocysteine insertion sequence binding
Y82_RS30265	COG2864	formate dehydrogenase
Y82_RS30270	COG0437	4 iron, 4 sulfur cluster binding
Y82_RS30280	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
Y82_RS30285	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS30285	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS30310	COG0463	Glycosyl transferase, family 2
Y82_RS30320	COG0534	Mate efflux family protein
Y82_RS30330	COG1283	sodium-dependent phosphate transmembrane transporter activity
Y82_RS30355	COG2162	N-hydroxyarylamine O-acetyltransferase activity
Y82_RS30380	COG4221	oxidoreductase activity
Y82_RS30385	COG1272	protein, Hemolysin III
Y82_RS30420	COG0023	Translation Initiation Factor
Y82_RS30510	COG2095	MarC family integral membrane protein
Y82_RS30515	COG0683	leucine binding
Y82_RS30530	COG0411	ABC transporter
Y82_RS30575	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
Y82_RS30590	COG0443	Heat shock 70 kDa protein
Y82_RS30615	COG0789	Transcriptional regulator
Y82_RS30620	COG2982	Protein involved in outer membrane biogenesis
Y82_RS30625	COG2193	ferroxidase activity
Y82_RS30635	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Y82_RS30640	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
Y82_RS30700	COG3712	iron ion homeostasis
Y82_RS30705	COG1595	DNA-templated transcription, initiation
Y82_RS30725	COG2814	Major facilitator Superfamily
Y82_RS30735	COG0583	DNA-binding transcription factor activity
Y82_RS30760	COG4221	oxidoreductase activity
Y82_RS30765	COG2423	ornithine cyclodeaminase activity
Y82_RS30795	COG0583	DNA-binding transcription factor activity
Y82_RS30810	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Y82_RS30850	COG0668	transmembrane transport
Y82_RS30870	COG5001	Diguanylate cyclase
Y82_RS30870	COG3300	MHYT domain
Y82_RS30880	COG0305	Participates in initiation and elongation during chromosome replication
Y82_RS30910	COG0557	exoribonuclease II activity
Y82_RS30940	COG0330	HflC and HflK could
Y82_RS30945	COG0330	HflC and HflK could
Y82_RS30950	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Y82_RS30970	COG0860	N-Acetylmuramoyl-L-alanine amidase
Y82_RS30975	COG0802	atpase or kinase
Y82_RS30980	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Y82_RS30980	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Y82_RS31035	COG5001	Diguanylate cyclase
Y82_RS31035	COG3300	MHYT domain
Y82_RS31040	COG3830	Belongs to the UPF0237 family
Y82_RS31040	COG0560	Phosphoserine phosphatase
Y82_RS31050	COG1988	membrane-bound metal-dependent
Y82_RS31065	COG3577	Aspartyl protease
Y82_RS31080	COG3150	esterase
Y82_RS31085	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
Y82_RS31095	COG0494	nUDIX hydrolase
Y82_RS31110	COG1538	Outer membrane efflux protein
Y82_RS31115	COG2249	NAD(P)H dehydrogenase (quinone) activity
Y82_RS31130	COG0045	succinate-CoA ligase (ADP-forming) activity
Y82_RS31135	COG1960	acyl-CoA dehydrogenase activity
Y82_RS31140	COG1024	Enoyl-CoA hydratase
Y82_RS31145	COG0833	amino acid
Y82_RS31175	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS31175	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS31185	COG1519	Transferase
Y82_RS31190	COG0583	DNA-binding transcription factor activity
Y82_RS31205	COG0667	Aldo Keto reductase
Y82_RS31215	COG1960	acyl-CoA dehydrogenase activity
Y82_RS31220	COG1960	acyl-CoA dehydrogenase activity
Y82_RS31245	COG1215	transferase activity, transferring glycosyl groups
Y82_RS31265	COG0438	transferase activity, transferring glycosyl groups
Y82_RS31270	COG2192	nodulation
Y82_RS31295	COG0438	transferase activity, transferring glycosyl groups
Y82_RS31300	COG0859	PFAM glycosyl transferase family 9
Y82_RS31305	COG0859	PFAM glycosyl transferase family 9
Y82_RS31350	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
Y82_RS31355	COG1960	acyl-CoA dehydrogenase activity
Y82_RS31370	COG3264	Mechanosensitive ion channel
Y82_RS31370	COG1196	nuclear chromosome segregation
Y82_RS31380	COG0730	response to heat
Y82_RS31385	COG2873	o-acetylhomoserine
Y82_RS31400	COG1192	Involved in chromosome partitioning
Y82_RS31405	COG0583	DNA-binding transcription factor activity
Y82_RS31410	COG2814	Major facilitator Superfamily
Y82_RS31435	COG0493	'glutamate synthase
Y82_RS31440	COG0067	glutamate synthase
Y82_RS31440	COG0070	glutamate synthase
Y82_RS31440	COG0069	glutamate synthase activity
Y82_RS31490	COG0281	malic enzyme
Y82_RS31510	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Y82_RS31630	COG0840	transmembrane signaling receptor activity
Y82_RS31640	COG1126	abc transporter atp-binding protein
Y82_RS31645	COG0765	amino acid transport
Y82_RS31675	COG1051	belongs to the nudix hydrolase family
Y82_RS31680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
Y82_RS31685	COG0251	oxidation-reduction process
Y82_RS31715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Y82_RS31735	COG2986	histidine ammonia-lyase
Y82_RS31740	COG4175	Glycine betaine
Y82_RS31745	COG4176	ABC-type proline glycine betaine transport system permease component
Y82_RS31765	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
Y82_RS31800	COG0402	S-adenosylhomocysteine deaminase activity
Y82_RS31850	COG0789	Transcriptional regulator
Y82_RS31855	COG1217	gtp-binding protein TYPA
Y82_RS31880	COG0668	transmembrane transport
Y82_RS31895	COG3852	Histidine kinase
Y82_RS31910	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
Y82_RS31940	COG4942	peptidase
Y82_RS31945	COG0793	Belongs to the peptidase S41A family
Y82_RS31950	COG2861	carbohydrate metabolic process
Y82_RS32010	COG0579	oxidoreductase
Y82_RS32020	COG1194	a g-specific adenine glycosylase
Y82_RS32030	COG0673	inositol 2-dehydrogenase activity
Y82_RS32040	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS32075	COG1846	Transcriptional regulator
Y82_RS32085	COG1566	PFAM secretion protein HlyD family protein
Y82_RS32090	COG2814	Major facilitator Superfamily
Y82_RS32155	COG0582	viral genome integration into host DNA
Y82_RS32160	COG1088	dTDP-glucose 4,6-dehydratase activity
Y82_RS32165	COG1091	dTDP-4-dehydrorhamnose reductase activity
Y82_RS32230	COG1218	3'(2'),5'-bisphosphate nucleotidase
Y82_RS32235	COG0494	nUDIX hydrolase
Y82_RS32240	COG1011	Hydrolase
Y82_RS32245	COG1652	LysM domain
Y82_RS32255	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
Y82_RS32275	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
Y82_RS32285	COG0824	Thioesterase
Y82_RS32290	COG1454	alcohol dehydrogenase
Y82_RS32295	COG1960	acyl-CoA dehydrogenase activity
Y82_RS32300	COG1024	Enoyl-CoA hydratase
Y82_RS32300	COG1250	3-hydroxyacyl-CoA dehydrogenase
Y82_RS32310	COG0778	Nitroreductase
Y82_RS32340	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Y82_RS32345	COG4067	protein conserved in archaea
Y82_RS32345	COG0189	ligase activity
Y82_RS32370	COG2183	response to ionizing radiation
Y82_RS32400	COG0306	phosphate transporter
Y82_RS32405	COG1392	Phosphate transport regulator
Y82_RS32410	COG3025	triphosphatase activity
Y82_RS32415	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Y82_RS32445	COG1178	ABC-type Fe3 transport system permease component
Y82_RS32455	COG0583	DNA-binding transcription factor activity
Y82_RS32470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Y82_RS32480	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Y82_RS32485	COG0006	proline dipeptidase activity
Y82_RS32510	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
Y82_RS32520	COG0842	Transport permease protein
Y82_RS32525	COG1129	ABC transporter
Y82_RS32525	COG0842	Transport permease protein
Y82_RS32530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Y82_RS32545	COG2271	Major facilitator Superfamily
Y82_RS32560	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Y82_RS32560	COG2755	lipolytic protein G-D-S-L family
Y82_RS32590	COG0586	Pfam SNARE associated Golgi protein
Y82_RS32595	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
Y82_RS32600	COG2050	protein possibly involved in aromatic compounds catabolism
Y82_RS32610	COG0672	)-iron permease
Y82_RS32615	COG1280	lysine exporter protein (LysE YggA)
Y82_RS32620	COG0861	Integral membrane protein TerC family
Y82_RS32630	COG0488	(ABC) transporter
Y82_RS32685	COG3275	phosphorelay sensor kinase activity
Y82_RS32705	COG4104	PAAR repeat-containing protein
Y82_RS32750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Y82_RS32820	COG0432	Pfam Uncharacterised protein family UPF0047
Y82_RS32825	COG0004	ammonium transporteR
Y82_RS32830	COG0347	Belongs to the P(II) protein family
Y82_RS32920	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Y82_RS32930	COG0583	DNA-binding transcription factor activity
Y82_RS32945	COG0210	DNA helicase
Y82_RS32950	COG0028	Belongs to the TPP enzyme family
Y82_RS32960	COG0427	acetyl-CoA hydrolase
Y82_RS32970	COG1396	sequence-specific DNA binding
Y82_RS32970	COG1917	Cupin 2, conserved barrel domain protein
Y82_RS32980	COG0251	oxidation-reduction process
Y82_RS33010	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Y82_RS33015	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
Y82_RS33020	COG2814	Major facilitator Superfamily
Y82_RS33025	COG1012	belongs to the aldehyde dehydrogenase family
Y82_RS33030	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Y82_RS33050	COG0747	negative chemotaxis
Y82_RS33065	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Y82_RS33105	COG3245	cytochrome
Y82_RS33125	COG0708	Exodeoxyribonuclease III
Y82_RS33140	COG1561	YicC-like family, N-terminal region
Y82_RS33155	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
Y82_RS33175	COG2207	Transcriptional regulator
Y82_RS33175	COG4753	response regulator
Y82_RS33185	COG0583	DNA-binding transcription factor activity
Y82_RS33190	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Y82_RS33230	COG3193	protein, possibly involved in utilization of glycolate and propanediol
Y82_RS33235	COG0247	lactate metabolic process
Y82_RS33240	COG0277	FAD linked oxidase domain protein
Y82_RS33245	COG0277	FAD linked oxidase domain protein
Y82_RS33250	COG2186	Transcriptional regulator
Y82_RS33280	COG1253	flavin adenine dinucleotide binding
Y82_RS33285	COG0739	heme binding
Y82_RS33305	COG0573	inorganic phosphate transmembrane transporter activity
Y82_RS33345	COG0477	Major facilitator Superfamily
Y82_RS33350	COG1607	acyl-coa hydrolase
Y82_RS33375	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
Y82_RS33380	COG4175	Glycine betaine
Y82_RS33385	COG4176	ABC-type proline glycine betaine transport system permease component
Y82_RS33395	COG1760	l-serine dehydratase
Y82_RS33410	COG0583	DNA-binding transcription factor activity
Y82_RS33420	COG0657	acetylesterase activity
Y82_RS33435	COG3246	L-lysine catabolic process to acetate
Y82_RS33490	COG0446	pyridine nucleotide-disulphide oxidoreductase
Y82_RS33490	COG1902	pentaerythritol trinitrate reductase activity
Y82_RS33495	COG0247	lactate metabolic process
Y82_RS33495	COG2181	nitrate reductase activity
Y82_RS33515	COG3655	Transcriptional regulator
Y82_RS33555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
Y82_RS33555	COG1017	nitric oxide dioxygenase activity
Y82_RS33645	COG0583	DNA-binding transcription factor activity
Y82_RS33660	COG2391	methyltransferase activity
Y82_RS33685	COG5016	pyruvate
Y82_RS33685	COG0511	ligase activity, forming carbon-carbon bonds
Y82_RS33690	COG0439	Biotin carboxylase
Y82_RS33695	COG0583	DNA-binding transcription factor activity
Y82_RS33710	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
Y82_RS33715	COG0826	peptidase U32
Y82_RS33735	COG0210	DNA helicase
Y82_RS33745	COG0427	acetyl-CoA hydrolase
Y82_RS33760	COG0438	transferase activity, transferring glycosyl groups
Y82_RS33805	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
Y82_RS33810	COG2755	lipolytic protein G-D-S-L family
Y82_RS33810	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Y82_RS33850	COG0679	Auxin Efflux Carrier
Y82_RS33860	COG2851	Citrate transporter
Y82_RS33865	COG0861	Integral membrane protein TerC family
Y82_RS33870	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
Y82_RS33875	COG1690	Belongs to the RtcB family
Y82_RS33920	COG0700	Nucleoside recognition
Y82_RS33925	COG1301	dicarboxylic acid transport
Y82_RS33950	COG5002	protein histidine kinase activity
Y82_RS33955	COG3023	N-Acetylmuramoyl-L-alanine amidase
Y82_RS33960	COG2095	MarC family integral membrane protein
Y82_RS33985	COG3245	cytochrome
Y82_RS34020	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
Y82_RS34025	COG0735	belongs to the Fur family
Y82_RS34035	COG1108	ABC-type Mn2 Zn2 transport systems permease components
Y82_RS34050	COG2011	ABC-type metal ion transport system permease component
Y82_RS34080	COG0531	amino acid
Y82_RS34090	COG4191	Histidine kinase
Y82_RS34125	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Y82_RS34125	COG4651	solute:proton antiporter activity
Y82_RS34130	COG1607	acyl-coa hydrolase
Y82_RS34140	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS34145	COG0174	glutamine synthetase
Y82_RS34150	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Y82_RS34155	COG1028	Short-chain dehydrogenase reductase Sdr
Y82_RS34180	COG4651	solute:proton antiporter activity
Y82_RS34180	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
Y82_RS34185	COG0477	Major facilitator Superfamily
Y82_RS34195	COG0523	cobalamin synthesis protein
Y82_RS34240	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Y82_RS34260	COG2358	TRAP transporter, solute receptor (TAXI family
Y82_RS34265	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
Y82_RS34285	COG1349	DNA-binding transcription factor activity
Y82_RS34345	COG1475	DNA binding
Y82_RS34350	COG1192	Involved in chromosome partitioning