locus-tag class description JHW28_RS00005 PF00308 Bacterial dnaA protein JHW28_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JHW28_RS00005 PF11638 DnaA N-terminal domain JHW28_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JHW28_RS00010 PF02767 DNA polymerase III beta subunit, central domain JHW28_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JHW28_RS00015 PF02463 RecF/RecN/SMC N terminal domain JHW28_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus JHW28_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS00020 PF01751 Toprim domain JHW28_RS00020 PF18053 DNA gyrase B subunit insert domain JHW28_RS00020 PF00204 DNA gyrase B JHW28_RS00025 PF00072 Response regulator receiver domain JHW28_RS00025 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS00035 PF00230 Major intrinsic protein JHW28_RS00045 PF00672 HAMP domain JHW28_RS00045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS00045 PF18698 Histidine kinase sensor domain JHW28_RS00045 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS00045 PF00989 PAS fold JHW28_RS00060 PF05746 DALR anticodon binding domain JHW28_RS00060 PF02092 Glycyl-tRNA synthetase beta subunit JHW28_RS00065 PF02091 Glycyl-tRNA synthetase alpha subunit JHW28_RS00070 PF03352 Methyladenine glycosylase JHW28_RS00090 PF02254 TrkA-N domain JHW28_RS00090 PF02080 TrkA-C domain JHW28_RS00095 PF01189 16S rRNA methyltransferase RsmB/F JHW28_RS00095 PF01029 NusB family JHW28_RS00100 PF00551 Formyl transferase JHW28_RS00100 PF02911 Formyl transferase, C-terminal domain JHW28_RS00105 PF01327 Polypeptide deformylase JHW28_RS00115 PF02481 DNA recombination-mediator protein A JHW28_RS00115 PF17782 DprA winged helix domain JHW28_RS00120 PF01300 Telomere recombination JHW28_RS00125 PF00107 Zinc-binding dehydrogenase JHW28_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS00130 PF01218 Coproporphyrinogen III oxidase JHW28_RS00135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JHW28_RS00135 PF01488 Shikimate / quinate 5-dehydrogenase JHW28_RS00135 PF08501 Shikimate dehydrogenase substrate binding domain JHW28_RS00140 PF01740 STAS domain JHW28_RS00140 PF00916 Sulfate permease family JHW28_RS00145 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHW28_RS00150 PF00884 Sulfatase JHW28_RS00150 PF12411 Choline sulfatase enzyme C terminal JHW28_RS00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS00155 PF03466 LysR substrate binding domain JHW28_RS00175 PF00290 Tryptophan synthase alpha chain JHW28_RS00180 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS00185 PF03466 LysR substrate binding domain JHW28_RS00195 PF07311 Dodecin JHW28_RS00205 PF00296 Luciferase-like monooxygenase JHW28_RS00210 PF02566 OsmC-like protein JHW28_RS00235 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS00240 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS00245 PF01432 Peptidase family M3 JHW28_RS00250 PF09526 Probable metal-binding protein (DUF2387) JHW28_RS00260 PF13618 Gluconate 2-dehydrogenase subunit 3 JHW28_RS00265 PF05199 GMC oxidoreductase JHW28_RS00265 PF00732 GMC oxidoreductase JHW28_RS00270 PF00034 Cytochrome c JHW28_RS00270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS00275 PF04055 Radical SAM superfamily JHW28_RS00280 PF00484 Carbonic anhydrase JHW28_RS00285 PF01740 STAS domain JHW28_RS00285 PF00916 Sulfate permease family JHW28_RS00295 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHW28_RS00295 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JHW28_RS00300 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS00305 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JHW28_RS00310 PF00510 Cytochrome c oxidase subunit III JHW28_RS00330 PF02628 Cytochrome oxidase assembly protein JHW28_RS00335 PF01040 UbiA prenyltransferase family JHW28_RS00340 PF02630 SCO1/SenC JHW28_RS00345 PF03180 NLPA lipoprotein JHW28_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS00355 PF00005 ABC transporter JHW28_RS00355 PF09383 NIL domain JHW28_RS00360 PF00199 Catalase JHW28_RS00360 PF06628 Catalase-related immune-responsive JHW28_RS00360 PF18011 C-terminal domain found in long catalases JHW28_RS00370 PF00950 ABC 3 transport family JHW28_RS00375 PF00005 ABC transporter JHW28_RS00380 PF01475 Ferric uptake regulator family JHW28_RS00385 PF01297 Zinc-uptake complex component A periplasmic JHW28_RS00390 PF01636 Phosphotransferase enzyme family JHW28_RS00400 PF01367 5'-3' exonuclease, C-terminal SAM fold JHW28_RS00400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JHW28_RS00400 PF01612 3'-5' exonuclease JHW28_RS00400 PF00476 DNA polymerase family A JHW28_RS00405 PF01926 50S ribosome-binding GTPase JHW28_RS00410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS00415 PF00034 Cytochrome c JHW28_RS00420 PF01323 DSBA-like thioredoxin domain JHW28_RS00430 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS00435 PF01510 N-acetylmuramoyl-L-alanine amidase JHW28_RS00440 PF12792 CSS motif domain associated with EAL JHW28_RS00440 PF00563 EAL domain JHW28_RS00445 PF00672 HAMP domain JHW28_RS00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS00445 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS00445 PF08448 PAS fold JHW28_RS00445 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JHW28_RS00450 PF00158 Sigma-54 interaction domain JHW28_RS00450 PF00072 Response regulator receiver domain JHW28_RS00450 PF02954 Bacterial regulatory protein, Fis family JHW28_RS00470 PF00375 Sodium:dicarboxylate symporter family JHW28_RS00475 PF07670 Nucleoside recognition JHW28_RS00490 PF00005 ABC transporter JHW28_RS00495 PF02405 Permease MlaE JHW28_RS00505 PF00675 Insulinase (Peptidase family M16) JHW28_RS00505 PF05193 Peptidase M16 inactive domain JHW28_RS00510 PF02690 Na+/Pi-cotransporter JHW28_RS00515 PF03741 Integral membrane protein TerC family JHW28_RS00520 PF03600 Citrate transporter JHW28_RS00560 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JHW28_RS00560 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JHW28_RS00565 PF02233 NAD(P) transhydrogenase beta subunit JHW28_RS00570 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JHW28_RS00575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JHW28_RS00575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHW28_RS00580 PF03466 LysR substrate binding domain JHW28_RS00580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS00585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS00585 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS00585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS00590 PF02515 CoA-transferase family III JHW28_RS00630 PF00593 TonB dependent receptor JHW28_RS00630 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS00635 PF04773 FecR protein JHW28_RS00635 PF16220 Domain of unknown function (DUF4880) JHW28_RS00640 PF08281 Sigma-70, region 4 JHW28_RS00640 PF04542 Sigma-70 region 2 JHW28_RS00645 PF02743 Cache domain JHW28_RS00645 PF00672 HAMP domain JHW28_RS00645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS00655 PF00975 Thioesterase domain JHW28_RS00655 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS00655 PF00501 AMP-binding enzyme JHW28_RS00655 PF00668 Condensation domain JHW28_RS00655 PF00550 Phosphopantetheine attachment site JHW28_RS00670 PF00975 Thioesterase domain JHW28_RS00675 PF07729 FCD domain JHW28_RS00675 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS00685 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS00685 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS00685 PF13188 PAS domain JHW28_RS00685 PF00563 EAL domain JHW28_RS00700 PF02321 Outer membrane efflux protein JHW28_RS00705 PF00664 ABC transporter transmembrane region JHW28_RS00705 PF03412 Peptidase C39 family JHW28_RS00705 PF00005 ABC transporter JHW28_RS00710 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS00710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS00715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JHW28_RS00725 PF00005 ABC transporter JHW28_RS00730 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS00735 PF03466 LysR substrate binding domain JHW28_RS00740 PF07690 Major Facilitator Superfamily JHW28_RS00745 PF13533 Biotin-lipoyl like JHW28_RS00750 PF02321 Outer membrane efflux protein JHW28_RS00835 PF01145 SPFH domain / Band 7 family JHW28_RS00835 PF16200 C-terminal region of band_7 JHW28_RS00870 PF04632 Fusaric acid resistance protein family JHW28_RS00880 PF13533 Biotin-lipoyl like JHW28_RS00885 PF02321 Outer membrane efflux protein JHW28_RS00895 PF06097 Bacterial protein of unknown function (DUF945) JHW28_RS00905 PF01522 Polysaccharide deacetylase JHW28_RS00905 PF14883 Hypothetical glycosyl hydrolase family 13 JHW28_RS00910 PF00535 Glycosyl transferase family 2 JHW28_RS00920 PF01161 Phosphatidylethanolamine-binding protein JHW28_RS00925 PF12034 Domain of unknown function (DUF3520) JHW28_RS00925 PF12450 von Willebrand factor JHW28_RS00925 PF00092 von Willebrand factor type A domain JHW28_RS00930 PF08281 Sigma-70, region 4 JHW28_RS00930 PF04542 Sigma-70 region 2 JHW28_RS01000 PF00171 Aldehyde dehydrogenase family JHW28_RS01005 PF00202 Aminotransferase class-III JHW28_RS01010 PF00072 Response regulator receiver domain JHW28_RS01015 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS01015 PF08448 PAS fold JHW28_RS01025 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS01025 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS01025 PF00563 EAL domain JHW28_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01050 PF12857 TOBE-like domain JHW28_RS01050 PF00005 ABC transporter JHW28_RS01065 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS01065 PF12833 Helix-turn-helix domain JHW28_RS01075 PF00884 Sulfatase JHW28_RS01080 PF00005 ABC transporter JHW28_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01090 PF09084 NMT1/THI5 like JHW28_RS01095 PF03466 LysR substrate binding domain JHW28_RS01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS01100 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JHW28_RS01105 PF16347 Domain of unknown function (DUF4976) JHW28_RS01105 PF00884 Sulfatase JHW28_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS01110 PF03466 LysR substrate binding domain JHW28_RS01115 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS01115 PF00593 TonB dependent receptor JHW28_RS01160 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS01165 PF05638 Type VI secretion system effector, Hcp JHW28_RS01170 PF07690 Major Facilitator Superfamily JHW28_RS01175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHW28_RS01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS01185 PF03466 LysR substrate binding domain JHW28_RS01190 PF03544 Gram-negative bacterial TonB protein C-terminal JHW28_RS01195 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS01200 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS01210 PF00158 Sigma-54 interaction domain JHW28_RS01215 PF03180 NLPA lipoprotein JHW28_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01230 PF00005 ABC transporter JHW28_RS01235 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS01240 PF02463 RecF/RecN/SMC N terminal domain JHW28_RS01255 PF00873 AcrB/AcrD/AcrF family JHW28_RS01265 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01270 PF09383 NIL domain JHW28_RS01270 PF00005 ABC transporter JHW28_RS01275 PF03180 NLPA lipoprotein JHW28_RS01280 PF00296 Luciferase-like monooxygenase JHW28_RS01285 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS01285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS01290 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS01295 PF00005 ABC transporter JHW28_RS01300 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01305 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS01310 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS01315 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS01320 PF02028 BCCT, betaine/carnitine/choline family transporter JHW28_RS01350 PF03466 LysR substrate binding domain JHW28_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS01365 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS01370 PF00593 TonB dependent receptor JHW28_RS01370 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS01375 PF00296 Luciferase-like monooxygenase JHW28_RS01380 PF00248 Aldo/keto reductase family JHW28_RS01385 PF01850 PIN domain JHW28_RS01395 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JHW28_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01405 PF00005 ABC transporter JHW28_RS01410 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHW28_RS01415 PF04262 Glutamate-cysteine ligase JHW28_RS01425 PF17674 HHH domain JHW28_RS01425 PF00575 S1 RNA binding domain JHW28_RS01425 PF09371 Tex-like protein N-terminal domain JHW28_RS01425 PF16921 Tex protein YqgF-like domain JHW28_RS01430 PF00072 Response regulator receiver domain JHW28_RS01430 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS01435 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS01435 PF00672 HAMP domain JHW28_RS01440 PF08443 RimK-like ATP-grasp domain JHW28_RS01440 PF18030 RimK PreATP-grasp domain JHW28_RS01445 PF18030 RimK PreATP-grasp domain JHW28_RS01445 PF08443 RimK-like ATP-grasp domain JHW28_RS01450 PF01479 S4 domain JHW28_RS01460 PF01430 Hsp33 protein JHW28_RS01465 PF01293 Phosphoenolpyruvate carboxykinase JHW28_RS01490 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS01505 PF09382 RQC domain JHW28_RS01505 PF00270 DEAD/DEAH box helicase JHW28_RS01505 PF00570 HRDC domain JHW28_RS01505 PF00271 Helicase conserved C-terminal domain JHW28_RS01505 PF16124 RecQ zinc-binding JHW28_RS01510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS01510 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS01510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS01515 PF03061 Thioesterase superfamily JHW28_RS01525 PF00384 Molybdopterin oxidoreductase JHW28_RS01530 PF02634 FdhD/NarQ family JHW28_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS01535 PF03466 LysR substrate binding domain JHW28_RS01540 PF04972 BON domain JHW28_RS01540 PF01476 LysM domain JHW28_RS01545 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS01550 PF00293 NUDIX domain JHW28_RS01555 PF00459 Inositol monophosphatase family JHW28_RS01565 PF02954 Bacterial regulatory protein, Fis family JHW28_RS01565 PF00072 Response regulator receiver domain JHW28_RS01565 PF00158 Sigma-54 interaction domain JHW28_RS01570 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS01570 PF02743 Cache domain JHW28_RS01575 PF04321 RmlD substrate binding domain JHW28_RS01580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JHW28_RS01585 PF00483 Nucleotidyl transferase JHW28_RS01590 PF16363 GDP-mannose 4,6 dehydratase JHW28_RS01595 PF00202 Aminotransferase class-III JHW28_RS01605 PF00795 Carbon-nitrogen hydrolase JHW28_RS01610 PF04371 Porphyromonas-type peptidyl-arginine deiminase JHW28_RS01620 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS01620 PF00593 TonB dependent receptor JHW28_RS01635 PF03573 outer membrane porin, OprD family JHW28_RS01640 PF00034 Cytochrome c JHW28_RS01645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHW28_RS01650 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS01655 PF00510 Cytochrome c oxidase subunit III JHW28_RS01660 PF00510 Cytochrome c oxidase subunit III JHW28_RS01675 PF03358 NADPH-dependent FMN reductase JHW28_RS01685 PF01569 PAP2 superfamily JHW28_RS01700 PF12833 Helix-turn-helix domain JHW28_RS01700 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS01725 PF13356 Arm DNA-binding domain JHW28_RS01725 PF00589 Phage integrase family JHW28_RS01760 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS01775 PF00005 ABC transporter JHW28_RS01780 PF00324 Amino acid permease JHW28_RS01805 PF04362 Bacterial Fe(2+) trafficking JHW28_RS01810 PF00633 Helix-hairpin-helix motif JHW28_RS01810 PF14815 NUDIX domain JHW28_RS01810 PF10576 Iron-sulfur binding domain of endonuclease III JHW28_RS01810 PF00730 HhH-GPD superfamily base excision DNA repair protein JHW28_RS01825 PF07690 Major Facilitator Superfamily JHW28_RS01830 PF00475 Imidazoleglycerol-phosphate dehydratase JHW28_RS01835 PF00117 Glutamine amidotransferase class-I JHW28_RS01845 PF00977 Histidine biosynthesis protein JHW28_RS01850 PF00977 Histidine biosynthesis protein JHW28_RS01860 PF04748 Divergent polysaccharide deacetylase JHW28_RS01865 PF13180 PDZ domain JHW28_RS01865 PF03572 Peptidase family S41 JHW28_RS01870 PF01551 Peptidase family M23 JHW28_RS01875 PF01676 Metalloenzyme superfamily JHW28_RS01875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JHW28_RS01885 PF00462 Glutaredoxin JHW28_RS01890 PF02556 Preprotein translocase subunit SecB JHW28_RS01895 PF00588 SpoU rRNA Methylase family JHW28_RS01905 PF00072 Response regulator receiver domain JHW28_RS01905 PF02954 Bacterial regulatory protein, Fis family JHW28_RS01905 PF00158 Sigma-54 interaction domain JHW28_RS01910 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS01910 PF00989 PAS fold JHW28_RS01925 PF12833 Helix-turn-helix domain JHW28_RS01925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JHW28_RS01925 PF02805 Metal binding domain of Ada JHW28_RS01925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHW28_RS01935 PF01817 Chorismate mutase type II JHW28_RS01945 PF00120 Glutamine synthetase, catalytic domain JHW28_RS01945 PF03951 Glutamine synthetase, beta-Grasp domain JHW28_RS01950 PF02568 Thiamine biosynthesis protein (ThiI) JHW28_RS01950 PF02926 THUMP domain JHW28_RS01955 PF00009 Elongation factor Tu GTP binding domain JHW28_RS01955 PF03144 Elongation factor Tu domain 2 JHW28_RS01955 PF00679 Elongation factor G C-terminus JHW28_RS01965 PF00343 Carbohydrate phosphorylase JHW28_RS01970 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JHW28_RS01990 PF02743 Cache domain JHW28_RS01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS01990 PF00672 HAMP domain JHW28_RS02005 PF01979 Amidohydrolase family JHW28_RS02010 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS02010 PF07702 UTRA domain JHW28_RS02015 PF05962 HutD JHW28_RS02020 PF17392 Urocanase C-terminal domain JHW28_RS02020 PF01175 Urocanase Rossmann-like domain JHW28_RS02020 PF17391 Urocanase N-terminal domain JHW28_RS02025 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS02035 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS02040 PF00005 ABC transporter JHW28_RS02040 PF00571 CBS domain JHW28_RS02045 PF00221 Aromatic amino acid lyase JHW28_RS02050 PF00221 Aromatic amino acid lyase JHW28_RS02055 PF00324 Amino acid permease JHW28_RS02060 PF01979 Amidohydrolase family JHW28_RS02070 PF00561 alpha/beta hydrolase fold JHW28_RS02075 PF02580 D-Tyr-tRNA(Tyr) deacylase JHW28_RS02080 PF04349 Periplasmic glucan biosynthesis protein, MdoG JHW28_RS02085 PF00535 Glycosyl transferase family 2 JHW28_RS02090 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS02100 PF00005 ABC transporter JHW28_RS02105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS02105 PF00672 HAMP domain JHW28_RS02105 PF16591 Helical bimodular sensor domain JHW28_RS02115 PF00902 Sec-independent protein translocase protein (TatC) JHW28_RS02120 PF02416 mttA/Hcf106 family JHW28_RS02125 PF02416 mttA/Hcf106 family JHW28_RS02130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JHW28_RS02135 PF01502 Phosphoribosyl-AMP cyclohydrolase JHW28_RS02140 PF03109 ABC1 family JHW28_RS02150 PF01209 ubiE/COQ5 methyltransferase family JHW28_RS02175 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JHW28_RS02180 PF00561 alpha/beta hydrolase fold JHW28_RS02185 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JHW28_RS02195 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS02195 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS02200 PF00227 Proteasome subunit JHW28_RS02210 PF03485 Arginyl tRNA synthetase N terminal domain JHW28_RS02210 PF00750 tRNA synthetases class I (R) JHW28_RS02210 PF05746 DALR anticodon binding domain JHW28_RS02220 PF00270 DEAD/DEAH box helicase JHW28_RS02220 PF00271 Helicase conserved C-terminal domain JHW28_RS02220 PF17764 3′ DNA-binding domain (3′BD) JHW28_RS02220 PF18074 Primosomal protein N C-terminal domain JHW28_RS02220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JHW28_RS02225 PF01197 Ribosomal protein L31 JHW28_RS02235 PF00390 Malic enzyme, N-terminal domain JHW28_RS02235 PF03949 Malic enzyme, NAD binding domain JHW28_RS02240 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS02240 PF17092 Penicillin-binding protein OB-like domain JHW28_RS02240 PF00912 Transglycosylase JHW28_RS02245 PF11104 Type IV pilus assembly protein PilM; JHW28_RS02250 PF05137 Fimbrial assembly protein (PilN) JHW28_RS02255 PF04350 Pilus assembly protein, PilO JHW28_RS02260 PF04351 Pilus assembly protein, PilP JHW28_RS02265 PF07660 Secretin and TonB N terminus short domain JHW28_RS02265 PF11741 AMIN domain JHW28_RS02265 PF03958 Bacterial type II/III secretion system short domain JHW28_RS02265 PF00263 Bacterial type II and III secretion system protein JHW28_RS02270 PF01202 Shikimate kinase JHW28_RS02275 PF01761 3-dehydroquinate synthase JHW28_RS02285 PF01493 GXGXG motif JHW28_RS02285 PF00310 Glutamine amidotransferases class-II JHW28_RS02285 PF04898 Glutamate synthase central domain JHW28_RS02285 PF01645 Conserved region in glutamate synthase JHW28_RS02290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHW28_RS02290 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS02295 PF01208 Uroporphyrinogen decarboxylase (URO-D) JHW28_RS02300 PF04076 Bacterial OB fold (BOF) protein JHW28_RS02305 PF07690 Major Facilitator Superfamily JHW28_RS02310 PF03466 LysR substrate binding domain JHW28_RS02310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS02325 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS02325 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS02340 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS02340 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS02350 PF08241 Methyltransferase domain JHW28_RS02380 PF00221 Aromatic amino acid lyase JHW28_RS02395 PF07977 FabA-like domain JHW28_RS02405 PF00550 Phosphopantetheine attachment site JHW28_RS02410 PF00550 Phosphopantetheine attachment site JHW28_RS02425 PF13614 AAA domain JHW28_RS02430 PF00085 Thioredoxin JHW28_RS02435 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system JHW28_RS02445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JHW28_RS02450 PF00924 Mechanosensitive ion channel JHW28_RS02450 PF12795 Mechanosensitive ion channel porin domain JHW28_RS02450 PF12794 Mechanosensitive ion channel inner membrane domain 1 JHW28_RS02455 PF03471 Transporter associated domain JHW28_RS02455 PF00999 Sodium/hydrogen exchanger family JHW28_RS02455 PF02080 TrkA-C domain JHW28_RS02460 PF00672 HAMP domain JHW28_RS02460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS02460 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS02475 PF12806 Acetyl-CoA dehydrogenase C-terminal like JHW28_RS02475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS02475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS02475 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS02480 PF14850 DNA-binding domain of Proline dehydrogenase JHW28_RS02480 PF01619 Proline dehydrogenase JHW28_RS02480 PF00171 Aldehyde dehydrogenase family JHW28_RS02480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JHW28_RS02485 PF00474 Sodium:solute symporter family JHW28_RS02490 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JHW28_RS02495 PF01625 Peptide methionine sulfoxide reductase JHW28_RS02500 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS02500 PF00563 EAL domain JHW28_RS02500 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS02505 PF00364 Biotin-requiring enzyme JHW28_RS02505 PF02817 e3 binding domain JHW28_RS02505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHW28_RS02510 PF17831 Pyruvate dehydrogenase E1 component middle domain JHW28_RS02510 PF00456 Transketolase, thiamine diphosphate binding domain JHW28_RS02515 PF08335 GlnD PII-uridylyltransferase JHW28_RS02515 PF03710 Glutamate-ammonia ligase adenylyltransferase JHW28_RS02520 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHW28_RS02525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHW28_RS02530 PF13439 Glycosyltransferase Family 4 JHW28_RS02530 PF00534 Glycosyl transferases group 1 JHW28_RS02555 PF16861 Carbamoyltransferase C-terminus JHW28_RS02555 PF02543 Carbamoyltransferase N-terminus JHW28_RS02560 PF13439 Glycosyltransferase Family 4 JHW28_RS02560 PF00534 Glycosyl transferases group 1 JHW28_RS02585 PF13439 Glycosyltransferase Family 4 JHW28_RS02585 PF00534 Glycosyl transferases group 1 JHW28_RS02600 PF00664 ABC transporter transmembrane region JHW28_RS02600 PF00005 ABC transporter JHW28_RS02610 PF00009 Elongation factor Tu GTP binding domain JHW28_RS02615 PF00294 pfkB family carbohydrate kinase JHW28_RS02615 PF01467 Cytidylyltransferase-like JHW28_RS02625 PF00248 Aldo/keto reductase family JHW28_RS02630 PF01266 FAD dependent oxidoreductase JHW28_RS02635 PF00893 Small Multidrug Resistance protein JHW28_RS02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS02640 PF03466 LysR substrate binding domain JHW28_RS02645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JHW28_RS02650 PF02321 Outer membrane efflux protein JHW28_RS02655 PF01964 Radical SAM ThiC family JHW28_RS02655 PF13667 ThiC-associated domain JHW28_RS02670 PF00293 NUDIX domain JHW28_RS02680 PF00149 Calcineurin-like phosphoesterase JHW28_RS02685 PF05728 Uncharacterised protein family (UPF0227) JHW28_RS02690 PF00204 DNA gyrase B JHW28_RS02690 PF00986 DNA gyrase B subunit, carboxyl terminus JHW28_RS02690 PF01751 Toprim domain JHW28_RS02690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS02705 PF00521 DNA gyrase/topoisomerase IV, subunit A JHW28_RS02705 PF03989 DNA gyrase C-terminal domain, beta-propeller JHW28_RS02725 PF02666 Phosphatidylserine decarboxylase JHW28_RS02730 PF00581 Rhodanese-like domain JHW28_RS02740 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS02745 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHW28_RS02745 PF00691 OmpA family JHW28_RS02765 PF03193 RsgA GTPase JHW28_RS02770 PF00929 Exonuclease JHW28_RS02775 PF03458 UPF0126 domain JHW28_RS02780 PF08331 Domain of unknown function (DUF1730) JHW28_RS02785 PF03853 YjeF-related protein N-terminus JHW28_RS02785 PF01256 Carbohydrate kinase JHW28_RS02790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JHW28_RS02795 PF11741 AMIN domain JHW28_RS02795 PF01520 N-acetylmuramoyl-L-alanine amidase JHW28_RS02800 PF08676 MutL C terminal dimerisation domain JHW28_RS02800 PF01119 DNA mismatch repair protein, C-terminal domain JHW28_RS02810 PF17209 Hfq protein JHW28_RS02815 PF16360 GTP-binding GTPase Middle Region JHW28_RS02815 PF13167 GTP-binding GTPase N-terminal JHW28_RS02815 PF01926 50S ribosome-binding GTPase JHW28_RS02820 PF01145 SPFH domain / Band 7 family JHW28_RS02825 PF01145 SPFH domain / Band 7 family JHW28_RS02830 PF13393 Histidyl-tRNA synthetase JHW28_RS02835 PF00709 Adenylosuccinate synthetase JHW28_RS02840 PF00672 HAMP domain JHW28_RS02840 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS02840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS02850 PF01547 Bacterial extracellular solute-binding protein JHW28_RS02865 PF00773 RNB domain JHW28_RS02865 PF08206 Ribonuclease B OB domain JHW28_RS02865 PF08461 Ribonuclease R winged-helix domain JHW28_RS02865 PF17876 Cold shock domain JHW28_RS02865 PF00575 S1 RNA binding domain JHW28_RS02870 PF08032 RNA 2'-O ribose methyltransferase substrate binding JHW28_RS02870 PF00588 SpoU rRNA Methylase family JHW28_RS02875 PF01250 Ribosomal protein S6 JHW28_RS02880 PF01084 Ribosomal protein S18 JHW28_RS02890 PF03948 Ribosomal protein L9, C-terminal domain JHW28_RS02890 PF01281 Ribosomal protein L9, N-terminal domain JHW28_RS02895 PF03796 DnaB-like helicase C terminal domain JHW28_RS02895 PF00772 DnaB-like helicase N terminal domain JHW28_RS02900 PF11842 Domain of unknown function (DUF3362) JHW28_RS02900 PF04055 Radical SAM superfamily JHW28_RS02900 PF08497 Radical SAM N-terminal JHW28_RS02915 PF04168 A predicted alpha-helical domain with a conserved ER motif. JHW28_RS02915 PF14403 Circularly permuted ATP-grasp type 2 JHW28_RS02925 PF00293 NUDIX domain JHW28_RS02935 PF03641 Possible lysine decarboxylase JHW28_RS02940 PF00127 Copper binding proteins, plastocyanin/azurin family JHW28_RS02945 PF02540 NAD synthase JHW28_RS02950 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JHW28_RS02950 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JHW28_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS02955 PF03466 LysR substrate binding domain JHW28_RS02960 PF00171 Aldehyde dehydrogenase family JHW28_RS02965 PF01266 FAD dependent oxidoreductase JHW28_RS02970 PF13458 Periplasmic binding protein JHW28_RS02975 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS02980 PF11862 Domain of unknown function (DUF3382) JHW28_RS02980 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS02985 PF00005 ABC transporter JHW28_RS02985 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS02990 PF00005 ABC transporter JHW28_RS02995 PF00106 short chain dehydrogenase JHW28_RS03010 PF04955 HupE / UreJ protein JHW28_RS03015 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS03020 PF01730 UreF JHW28_RS03025 PF02814 UreE urease accessory protein, N-terminal domain JHW28_RS03025 PF05194 UreE urease accessory protein, C-terminal domain JHW28_RS03030 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS03040 PF05170 AsmA family JHW28_RS03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03045 PF03466 LysR substrate binding domain JHW28_RS03050 PF02525 Flavodoxin-like fold JHW28_RS03055 PF00893 Small Multidrug Resistance protein JHW28_RS03060 PF00561 alpha/beta hydrolase fold JHW28_RS03065 PF00892 EamA-like transporter family JHW28_RS03070 PF02311 AraC-like ligand binding domain JHW28_RS03070 PF12833 Helix-turn-helix domain JHW28_RS03075 PF07769 psiF repeat JHW28_RS03085 PF00012 Hsp70 protein JHW28_RS03090 PF00226 DnaJ domain JHW28_RS03090 PF01556 DnaJ C terminal domain JHW28_RS03100 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS03100 PF08446 PAS fold JHW28_RS03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS03100 PF00360 Phytochrome region JHW28_RS03100 PF01590 GAF domain JHW28_RS03105 PF00449 Urease alpha-subunit, N-terminal domain JHW28_RS03105 PF01979 Amidohydrolase family JHW28_RS03110 PF00699 Urease beta subunit JHW28_RS03115 PF13673 Acetyltransferase (GNAT) domain JHW28_RS03125 PF00547 Urease, gamma subunit JHW28_RS03130 PF01774 UreD urease accessory protein JHW28_RS03135 PF00005 ABC transporter JHW28_RS03140 PF00005 ABC transporter JHW28_RS03140 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS03150 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS03155 PF13458 Periplasmic binding protein JHW28_RS03160 PF01032 FecCD transport family JHW28_RS03170 PF00005 ABC transporter JHW28_RS03175 PF00593 TonB dependent receptor JHW28_RS03175 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS03210 PF05973 Phage derived protein Gp49-like (DUF891) JHW28_RS03215 PF02571 Precorrin-6x reductase CbiJ/CobK JHW28_RS03220 PF01888 CbiD JHW28_RS03225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS03230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS03230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS03235 PF02570 Precorrin-8X methylmutase JHW28_RS03240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS03245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS03255 PF01914 MarC family integral membrane protein JHW28_RS03260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHW28_RS03260 PF00072 Response regulator receiver domain JHW28_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS03260 PF00672 HAMP domain JHW28_RS03260 PF01627 Hpt domain JHW28_RS03260 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS03265 PF02843 Phosphoribosylglycinamide synthetase, C domain JHW28_RS03265 PF02844 Phosphoribosylglycinamide synthetase, N domain JHW28_RS03265 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JHW28_RS03270 PF01808 AICARFT/IMPCHase bienzyme JHW28_RS03270 PF02142 MGS-like domain JHW28_RS03275 PF02954 Bacterial regulatory protein, Fis family JHW28_RS03280 PF01207 Dihydrouridine synthase (Dus) JHW28_RS03295 PF00289 Biotin carboxylase, N-terminal domain JHW28_RS03295 PF02785 Biotin carboxylase C-terminal domain JHW28_RS03295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHW28_RS03300 PF00364 Biotin-requiring enzyme JHW28_RS03305 PF01220 Dehydroquinase class II JHW28_RS03310 PF11412 Disulphide bond corrector protein DsbC JHW28_RS03310 PF02683 Cytochrome C biogenesis protein transmembrane region JHW28_RS03315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS03320 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS03320 PF00072 Response regulator receiver domain JHW28_RS03330 PF00293 NUDIX domain JHW28_RS03335 PF01253 Translation initiation factor SUI1 JHW28_RS03340 PF17810 Arginine decarboxylase helical bundle domain JHW28_RS03340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHW28_RS03340 PF17944 Arginine decarboxylase C-terminal helical extension JHW28_RS03345 PF01554 MatE JHW28_RS03350 PF00207 Alpha-2-macroglobulin family JHW28_RS03350 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JHW28_RS03350 PF01835 MG2 domain JHW28_RS03350 PF07703 Alpha-2-macroglobulin bait region domain JHW28_RS03350 PF07678 A-macroglobulin TED domain JHW28_RS03350 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JHW28_RS03350 PF17962 Bacterial macroglobulin domain 6 JHW28_RS03350 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JHW28_RS03350 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JHW28_RS03360 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS03360 PF06832 Penicillin-Binding Protein C-terminus Family JHW28_RS03360 PF00912 Transglycosylase JHW28_RS03370 PF13847 Methyltransferase domain JHW28_RS03390 PF08448 PAS fold JHW28_RS03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS03390 PF08447 PAS fold JHW28_RS03405 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS03405 PF00072 Response regulator receiver domain JHW28_RS03420 PF00437 Type II/IV secretion system protein JHW28_RS03445 PF00072 Response regulator receiver domain JHW28_RS03445 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS03480 PF02803 Thiolase, C-terminal domain JHW28_RS03480 PF00108 Thiolase, N-terminal domain JHW28_RS03490 PF00376 MerR family regulatory protein JHW28_RS03490 PF09278 MerR, DNA binding JHW28_RS03495 PF00403 Heavy-metal-associated domain JHW28_RS03510 PF07690 Major Facilitator Superfamily JHW28_RS03520 PF00107 Zinc-binding dehydrogenase JHW28_RS03520 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS03525 PF03992 Antibiotic biosynthesis monooxygenase JHW28_RS03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03530 PF03466 LysR substrate binding domain JHW28_RS03535 PF07690 Major Facilitator Superfamily JHW28_RS03540 PF00962 Adenosine/AMP deaminase JHW28_RS03545 PF03171 2OG-Fe(II) oxygenase superfamily JHW28_RS03545 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JHW28_RS03550 PF02608 ABC transporter substrate-binding protein PnrA-like JHW28_RS03555 PF01699 Sodium/calcium exchanger protein JHW28_RS03560 PF01979 Amidohydrolase family JHW28_RS03570 PF13411 MerR HTH family regulatory protein JHW28_RS03580 PF04185 Phosphoesterase family JHW28_RS03585 PF00593 TonB dependent receptor JHW28_RS03585 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS03585 PF07660 Secretin and TonB N terminus short domain JHW28_RS03590 PF01048 Phosphorylase superfamily JHW28_RS03605 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS03610 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS03615 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS03620 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS03625 PF00005 ABC transporter JHW28_RS03630 PF01205 Uncharacterized protein family UPF0029 JHW28_RS03635 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS03635 PF08362 YcdC-like protein, C-terminal region JHW28_RS03640 PF00860 Permease family JHW28_RS03645 PF03466 LysR substrate binding domain JHW28_RS03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03650 PF00202 Aminotransferase class-III JHW28_RS03655 PF00171 Aldehyde dehydrogenase family JHW28_RS03685 PF17946 RecC C-terminal domain JHW28_RS03690 PF12705 PD-(D/E)XK nuclease superfamily JHW28_RS03690 PF00580 UvrD/REP helicase N-terminal domain JHW28_RS03690 PF13361 UvrD-like helicase C-terminal domain JHW28_RS03695 PF13538 UvrD-like helicase C-terminal domain JHW28_RS03700 PF00005 ABC transporter JHW28_RS03705 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS03725 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS03725 PF17152 Periplasmic sensor domain JHW28_RS03745 PF03466 LysR substrate binding domain JHW28_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03750 PF00171 Aldehyde dehydrogenase family JHW28_RS03755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHW28_RS03755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS03770 PF04199 Putative cyclase JHW28_RS03775 PF03301 Tryptophan 2,3-dioxygenase JHW28_RS03780 PF00324 Amino acid permease JHW28_RS03785 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS03785 PF00970 Oxidoreductase FAD-binding domain JHW28_RS03785 PF00175 Oxidoreductase NAD-binding domain JHW28_RS03790 PF00866 Ring hydroxylating beta subunit JHW28_RS03795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JHW28_RS03795 PF00355 Rieske [2Fe-2S] domain JHW28_RS03800 PF12833 Helix-turn-helix domain JHW28_RS03805 PF01037 Lrp/AsnC ligand binding domain JHW28_RS03810 PF00266 Aminotransferase class-V JHW28_RS03815 PF00324 Amino acid permease JHW28_RS03820 PF03466 LysR substrate binding domain JHW28_RS03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03835 PF02525 Flavodoxin-like fold JHW28_RS03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03840 PF03466 LysR substrate binding domain JHW28_RS03855 PF02447 GntP family permease JHW28_RS03860 PF01380 SIS domain JHW28_RS03865 PF07969 Amidohydrolase family JHW28_RS03875 PF12833 Helix-turn-helix domain JHW28_RS03875 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS03890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS03890 PF00672 HAMP domain JHW28_RS03890 PF16591 Helical bimodular sensor domain JHW28_RS03920 PF13302 Acetyltransferase (GNAT) domain JHW28_RS03930 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS03940 PF00561 alpha/beta hydrolase fold JHW28_RS03950 PF13416 Bacterial extracellular solute-binding protein JHW28_RS03955 PF03466 LysR substrate binding domain JHW28_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS03980 PF00271 Helicase conserved C-terminal domain JHW28_RS04010 PF02589 LUD domain JHW28_RS04015 PF02589 LUD domain JHW28_RS04015 PF11870 Domain of unknown function (DUF3390) JHW28_RS04015 PF13183 4Fe-4S dicluster domain JHW28_RS04020 PF02754 Cysteine-rich domain JHW28_RS04025 PF02652 L-lactate permease JHW28_RS04030 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS04030 PF07729 FCD domain JHW28_RS04035 PF01668 SmpB protein JHW28_RS04040 PF00209 Sodium:neurotransmitter symporter family JHW28_RS04045 PF03364 Polyketide cyclase / dehydrase and lipid transport JHW28_RS04050 PF03658 RnfH family Ubiquitin JHW28_RS04055 PF04355 SmpA / OmlA family JHW28_RS04060 PF01475 Ferric uptake regulator family JHW28_RS04065 PF02463 RecF/RecN/SMC N terminal domain JHW28_RS04070 PF01025 GrpE JHW28_RS04075 PF00012 Hsp70 protein JHW28_RS04080 PF01556 DnaJ C terminal domain JHW28_RS04080 PF00226 DnaJ domain JHW28_RS04080 PF00684 DnaJ central domain JHW28_RS04085 PF01113 Dihydrodipicolinate reductase, N-terminus JHW28_RS04085 PF05173 Dihydrodipicolinate reductase, C-terminus JHW28_RS04090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JHW28_RS04090 PF00117 Glutamine amidotransferase class-I JHW28_RS04095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHW28_RS04095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JHW28_RS04095 PF02142 MGS-like domain JHW28_RS04100 PF03449 Transcription elongation factor, N-terminal JHW28_RS04100 PF01272 Transcription elongation factor, GreA/GreB, C-term JHW28_RS04110 PF01985 CRS1 / YhbY (CRM) domain JHW28_RS04115 PF01728 FtsJ-like methyltransferase JHW28_RS04120 PF01434 Peptidase family M41 JHW28_RS04120 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS04120 PF17862 AAA+ lid domain JHW28_RS04120 PF06480 FtsH Extracellular JHW28_RS04125 PF00809 Pterin binding enzyme JHW28_RS04130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHW28_RS04130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHW28_RS04130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHW28_RS04130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHW28_RS04135 PF00121 Triosephosphate isomerase JHW28_RS04140 PF03840 Preprotein translocase SecG subunit JHW28_RS04155 PF02576 RimP N-terminal domain JHW28_RS04155 PF17384 RimP C-terminal SH3 domain JHW28_RS04160 PF00575 S1 RNA binding domain JHW28_RS04160 PF13184 NusA-like KH domain JHW28_RS04160 PF08529 NusA N-terminal domain JHW28_RS04165 PF11987 Translation-initiation factor 2 JHW28_RS04165 PF04760 Translation initiation factor IF-2, N-terminal region JHW28_RS04165 PF08364 Bacterial translation initiation factor IF-2 associated region JHW28_RS04165 PF00009 Elongation factor Tu GTP binding domain JHW28_RS04170 PF02033 Ribosome-binding factor A JHW28_RS04175 PF01509 TruB family pseudouridylate synthase (N terminal domain) JHW28_RS04175 PF16198 tRNA pseudouridylate synthase B C-terminal domain JHW28_RS04175 PF09157 Pseudouridine synthase II TruB, C-terminal JHW28_RS04180 PF00312 Ribosomal protein S15 JHW28_RS04185 PF00013 KH domain JHW28_RS04185 PF01138 3' exoribonuclease family, domain 1 JHW28_RS04185 PF00575 S1 RNA binding domain JHW28_RS04185 PF03725 3' exoribonuclease family, domain 2 JHW28_RS04185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JHW28_RS04205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JHW28_RS04205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JHW28_RS04215 PF01510 N-acetylmuramoyl-L-alanine amidase JHW28_RS04225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS04225 PF00672 HAMP domain JHW28_RS04230 PF01026 TatD related DNase JHW28_RS04235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHW28_RS04235 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS04240 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS04240 PF05524 PEP-utilising enzyme, N-terminal JHW28_RS04240 PF02896 PEP-utilising enzyme, TIM barrel domain JHW28_RS04240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHW28_RS04240 PF00381 PTS HPr component phosphorylation site JHW28_RS04245 PF00294 pfkB family carbohydrate kinase JHW28_RS04250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHW28_RS04250 PF02378 Phosphotransferase system, EIIC JHW28_RS04260 PF16655 PhoD-like phosphatase, N-terminal domain JHW28_RS04260 PF09423 PhoD-like phosphatase JHW28_RS04265 PF00258 Flavodoxin JHW28_RS04265 PF00667 FAD binding domain JHW28_RS04265 PF00175 Oxidoreductase NAD-binding domain JHW28_RS04270 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS04270 PF00593 TonB dependent receptor JHW28_RS04275 PF18331 PKHD-type hydroxylase C-terminal domain JHW28_RS04275 PF13640 2OG-Fe(II) oxygenase superfamily JHW28_RS04285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHW28_RS04285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHW28_RS04290 PF00571 CBS domain JHW28_RS04290 PF00005 ABC transporter JHW28_RS04295 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS04300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHW28_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS04310 PF00009 Elongation factor Tu GTP binding domain JHW28_RS04310 PF03144 Elongation factor Tu domain 2 JHW28_RS04310 PF16658 Class II release factor RF3, C-terminal domain JHW28_RS04320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS04320 PF00005 ABC transporter JHW28_RS04325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS04325 PF00005 ABC transporter JHW28_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS04330 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS04340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS04345 PF03573 outer membrane porin, OprD family JHW28_RS04350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS04355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS04365 PF01381 Helix-turn-helix JHW28_RS04365 PF07883 Cupin domain JHW28_RS04375 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS04380 PF02954 Bacterial regulatory protein, Fis family JHW28_RS04380 PF00072 Response regulator receiver domain JHW28_RS04385 PF00005 ABC transporter JHW28_RS04385 PF06472 ABC transporter transmembrane region 2 JHW28_RS04390 PF07729 FCD domain JHW28_RS04390 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS04405 PF00701 Dihydrodipicolinate synthetase family JHW28_RS04410 PF00171 Aldehyde dehydrogenase family JHW28_RS04415 PF07690 Major Facilitator Superfamily JHW28_RS04420 PF08666 SAF domain JHW28_RS04420 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JHW28_RS04430 PF02627 Carboxymuconolactone decarboxylase family JHW28_RS04435 PF01699 Sodium/calcium exchanger protein JHW28_RS04440 PF03330 Lytic transglycolase JHW28_RS04445 PF02934 GatB/GatE catalytic domain JHW28_RS04445 PF02637 GatB domain JHW28_RS04450 PF01425 Amidase JHW28_RS04455 PF02686 Glu-tRNAGln amidotransferase C subunit JHW28_RS04465 PF04085 rod shape-determining protein MreC JHW28_RS04475 PF02545 Maf-like protein JHW28_RS04480 PF00575 S1 RNA binding domain JHW28_RS04480 PF10150 Ribonuclease E/G family JHW28_RS04490 PF00795 Carbon-nitrogen hydrolase JHW28_RS04495 PF01523 Putative modulator of DNA gyrase JHW28_RS04500 PF04751 Protein of unknown function (DUF615) JHW28_RS04505 PF01523 Putative modulator of DNA gyrase JHW28_RS04515 PF10415 Fumarase C C-terminus JHW28_RS04515 PF00206 Lyase JHW28_RS04525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHW28_RS04525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHW28_RS04530 PF02535 ZIP Zinc transporter JHW28_RS04535 PF00381 PTS HPr component phosphorylation site JHW28_RS04540 PF03668 P-loop ATPase protein family JHW28_RS04545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHW28_RS04550 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JHW28_RS04555 PF04552 Sigma-54, DNA binding domain JHW28_RS04555 PF04963 Sigma-54 factor, core binding domain JHW28_RS04555 PF00309 Sigma-54 factor, Activator interacting domain (AID) JHW28_RS04560 PF00005 ABC transporter JHW28_RS04560 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS04565 PF03968 OstA-like protein JHW28_RS04580 PF01380 SIS domain JHW28_RS04580 PF00571 CBS domain JHW28_RS04585 PF00005 ABC transporter JHW28_RS04590 PF02405 Permease MlaE JHW28_RS04595 PF02470 MlaD protein JHW28_RS04600 PF05494 MlaC protein JHW28_RS04615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHW28_RS04620 PF01634 ATP phosphoribosyltransferase JHW28_RS04625 PF00815 Histidinol dehydrogenase JHW28_RS04630 PF00155 Aminotransferase class I and II JHW28_RS04635 PF13180 PDZ domain JHW28_RS04640 PF01784 NIF3 (NGG1p interacting factor 3) JHW28_RS04645 PF01507 Phosphoadenosine phosphosulfate reductase family JHW28_RS04650 PF00009 Elongation factor Tu GTP binding domain JHW28_RS04655 PF01553 Acyltransferase JHW28_RS04660 PF01515 Phosphate acetyl/butaryl transferase JHW28_RS04660 PF07085 DRTGG domain JHW28_RS04670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS04675 PF00255 Glutathione peroxidase JHW28_RS04680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS04685 PF13439 Glycosyltransferase Family 4 JHW28_RS04685 PF00534 Glycosyl transferases group 1 JHW28_RS04695 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS04710 PF02152 Dihydroneopterin aldolase JHW28_RS04715 PF01227 GTP cyclohydrolase I JHW28_RS04730 PF13411 MerR HTH family regulatory protein JHW28_RS04740 PF01740 STAS domain JHW28_RS04740 PF13426 PAS domain JHW28_RS04745 PF00258 Flavodoxin JHW28_RS04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS04750 PF03466 LysR substrate binding domain JHW28_RS04755 PF03788 LrgA family JHW28_RS04760 PF04172 LrgB-like family JHW28_RS04765 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS04770 PF00561 alpha/beta hydrolase fold JHW28_RS04775 PF00106 short chain dehydrogenase JHW28_RS04790 PF07044 Protein of unknown function (DUF1329) JHW28_RS04795 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS04795 PF17874 MalT-like TPR region JHW28_RS04805 PF04209 homogentisate 1,2-dioxygenase JHW28_RS04810 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS04815 PF13417 Glutathione S-transferase, N-terminal domain JHW28_RS04820 PF07690 Major Facilitator Superfamily JHW28_RS04825 PF13673 Acetyltransferase (GNAT) domain JHW28_RS04830 PF08241 Methyltransferase domain JHW28_RS04835 PF13369 Transglutaminase-like superfamily JHW28_RS04840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JHW28_RS04840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JHW28_RS04845 PF00676 Dehydrogenase E1 component JHW28_RS04850 PF02780 Transketolase, C-terminal domain JHW28_RS04850 PF02779 Transketolase, pyrimidine binding domain JHW28_RS04855 PF00364 Biotin-requiring enzyme JHW28_RS04855 PF02817 e3 binding domain JHW28_RS04855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHW28_RS04865 PF06146 Phosphate-starvation-inducible E JHW28_RS04880 PF03315 Serine dehydratase beta chain JHW28_RS04880 PF03313 Serine dehydratase alpha chain JHW28_RS04885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS04885 PF03466 LysR substrate binding domain JHW28_RS04895 PF00593 TonB dependent receptor JHW28_RS04895 PF07660 Secretin and TonB N terminus short domain JHW28_RS04895 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS04900 PF16220 Domain of unknown function (DUF4880) JHW28_RS04900 PF04773 FecR protein JHW28_RS04905 PF08281 Sigma-70, region 4 JHW28_RS04905 PF04542 Sigma-70 region 2 JHW28_RS04925 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JHW28_RS04935 PF00892 EamA-like transporter family JHW28_RS04940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS04940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS04945 PF03466 LysR substrate binding domain JHW28_RS04950 PF02321 Outer membrane efflux protein JHW28_RS04955 PF04632 Fusaric acid resistance protein family JHW28_RS04965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS04965 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS04985 PF00106 short chain dehydrogenase JHW28_RS05000 PF02661 Fic/DOC family JHW28_RS05010 PF01050 Mannose-6-phosphate isomerase JHW28_RS05010 PF00483 Nucleotidyl transferase JHW28_RS05015 PF11182 Alginate O-acetyl transferase AlgF JHW28_RS05020 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JHW28_RS05025 PF03062 MBOAT, membrane-bound O-acyltransferase family JHW28_RS05030 PF05426 Alginate lyase JHW28_RS05035 PF16824 C-terminal carbohydrate-binding module JHW28_RS05035 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JHW28_RS05040 PF05048 Periplasmic copper-binding protein (NosD) JHW28_RS05045 PF13372 Alginate export JHW28_RS05050 PF08238 Sel1 repeat JHW28_RS05055 PF07238 PilZ domain JHW28_RS05065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JHW28_RS05065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JHW28_RS05065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JHW28_RS05070 PF03883 Peroxide stress protein YaaA JHW28_RS05080 PF13638 PIN domain JHW28_RS05080 PF02562 PhoH-like protein JHW28_RS05085 PF01967 MoaC family JHW28_RS05090 PF02597 ThiS family JHW28_RS05095 PF02391 MoaE protein JHW28_RS05100 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS05105 PF08348 YheO-like PAS domain JHW28_RS05105 PF13309 HTH domain JHW28_RS05110 PF01266 FAD dependent oxidoreductase JHW28_RS05115 PF02423 Ornithine cyclodeaminase/mu-crystallin family JHW28_RS05120 PF00271 Helicase conserved C-terminal domain JHW28_RS05120 PF00270 DEAD/DEAH box helicase JHW28_RS05125 PF02230 Phospholipase/Carboxylesterase JHW28_RS05130 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS05135 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS05140 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS05145 PF00005 ABC transporter JHW28_RS05150 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA JHW28_RS05155 PF15723 Motility quorum-sensing regulator, toxin of MqsA JHW28_RS05160 PF07729 FCD domain JHW28_RS05160 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS05165 PF07690 Major Facilitator Superfamily JHW28_RS05175 PF01541 GIY-YIG catalytic domain JHW28_RS05195 PF04245 37-kD nucleoid-associated bacterial protein JHW28_RS05200 PF00216 Bacterial DNA-binding protein JHW28_RS05205 PF05971 RNA methyltransferase JHW28_RS05210 PF10458 Valyl tRNA synthetase tRNA binding arm JHW28_RS05210 PF08264 Anticodon-binding domain of tRNA JHW28_RS05210 PF00133 tRNA synthetases class I (I, L, M and V) JHW28_RS05220 PF04364 DNA polymerase III chi subunit, HolC JHW28_RS05225 PF02789 Cytosol aminopeptidase family, N-terminal domain JHW28_RS05225 PF00883 Cytosol aminopeptidase family, catalytic domain JHW28_RS05230 PF03739 Lipopolysaccharide export system permease LptF/LptG JHW28_RS05235 PF03739 Lipopolysaccharide export system permease LptF/LptG JHW28_RS05240 PF00679 Elongation factor G C-terminus JHW28_RS05240 PF00009 Elongation factor Tu GTP binding domain JHW28_RS05240 PF06421 GTP-binding protein LepA C-terminus JHW28_RS05240 PF03144 Elongation factor Tu domain 2 JHW28_RS05245 PF10502 Signal peptidase, peptidase S26 JHW28_RS05255 PF14622 Ribonuclease-III-like JHW28_RS05255 PF00035 Double-stranded RNA binding motif JHW28_RS05260 PF07650 KH domain JHW28_RS05260 PF01926 50S ribosome-binding GTPase JHW28_RS05265 PF02565 Recombination protein O C terminal JHW28_RS05265 PF11967 Recombination protein O N terminal JHW28_RS05270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JHW28_RS05275 PF01464 Transglycosylase SLT domain JHW28_RS05275 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS05280 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JHW28_RS05280 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JHW28_RS05280 PF02769 AIR synthase related protein, C-terminal domain JHW28_RS05290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JHW28_RS05290 PF02378 Phosphotransferase system, EIIC JHW28_RS05290 PF00367 phosphotransferase system, EIIB JHW28_RS05295 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS05295 PF02896 PEP-utilising enzyme, TIM barrel domain JHW28_RS05295 PF00381 PTS HPr component phosphorylation site JHW28_RS05295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHW28_RS05295 PF05524 PEP-utilising enzyme, N-terminal JHW28_RS05300 PF01380 SIS domain JHW28_RS05305 PF01979 Amidohydrolase family JHW28_RS05310 PF07702 UTRA domain JHW28_RS05310 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS05320 PF00293 NUDIX domain JHW28_RS05320 PF09297 NADH pyrophosphatase zinc ribbon domain JHW28_RS05325 PF00293 NUDIX domain JHW28_RS05330 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS05345 PF02222 ATP-grasp domain JHW28_RS05350 PF00083 Sugar (and other) transporter JHW28_RS05350 PF07690 Major Facilitator Superfamily JHW28_RS05355 PF03471 Transporter associated domain JHW28_RS05355 PF00571 CBS domain JHW28_RS05355 PF01595 Cyclin M transmembrane N-terminal domain JHW28_RS05365 PF02881 SRP54-type protein, helical bundle domain JHW28_RS05365 PF00448 SRP54-type protein, GTPase domain JHW28_RS05365 PF02978 Signal peptide binding domain JHW28_RS05370 PF00886 Ribosomal protein S16 JHW28_RS05375 PF01782 RimM N-terminal domain JHW28_RS05375 PF05239 PRC-barrel domain JHW28_RS05380 PF01746 tRNA (Guanine-1)-methyltransferase JHW28_RS05385 PF01245 Ribosomal protein L19 JHW28_RS05390 PF03061 Thioesterase superfamily JHW28_RS05400 PF00589 Phage integrase family JHW28_RS05400 PF02899 Phage integrase, N-terminal SAM-like domain JHW28_RS05405 PF10411 Disulfide bond isomerase protein N-terminus JHW28_RS05405 PF13098 Thioredoxin-like domain JHW28_RS05410 PF01842 ACT domain JHW28_RS05410 PF00742 Homoserine dehydrogenase JHW28_RS05410 PF03447 Homoserine dehydrogenase, NAD binding domain JHW28_RS05415 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS05415 PF14821 Threonine synthase N terminus JHW28_RS05420 PF01627 Hpt domain JHW28_RS05420 PF00989 PAS fold JHW28_RS05420 PF00072 Response regulator receiver domain JHW28_RS05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS05420 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS05425 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS05425 PF00563 EAL domain JHW28_RS05425 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS05430 PF00072 Response regulator receiver domain JHW28_RS05430 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS05450 PF02515 CoA-transferase family III JHW28_RS05455 PF07152 YaeQ protein JHW28_RS05460 PF17768 RecJ OB domain JHW28_RS05460 PF01368 DHH family JHW28_RS05460 PF02272 DHHA1 domain JHW28_RS05465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS05470 PF04349 Periplasmic glucan biosynthesis protein, MdoG JHW28_RS05480 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS05480 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS05500 PF00171 Aldehyde dehydrogenase family JHW28_RS05505 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS05510 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS05515 PF08402 TOBE domain JHW28_RS05515 PF00005 ABC transporter JHW28_RS05520 PF13416 Bacterial extracellular solute-binding protein JHW28_RS05525 PF00171 Aldehyde dehydrogenase family JHW28_RS05530 PF03466 LysR substrate binding domain JHW28_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS05540 PF00672 HAMP domain JHW28_RS05540 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS05550 PF01739 CheR methyltransferase, SAM binding domain JHW28_RS05560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS05560 PF01584 CheW-like domain JHW28_RS05560 PF00072 Response regulator receiver domain JHW28_RS05560 PF01627 Hpt domain JHW28_RS05565 PF00072 Response regulator receiver domain JHW28_RS05565 PF01339 CheB methylesterase JHW28_RS05570 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS05570 PF00563 EAL domain JHW28_RS05570 PF00360 Phytochrome region JHW28_RS05570 PF01590 GAF domain JHW28_RS05580 PF00152 tRNA synthetases class II (D, K and N) JHW28_RS05580 PF01336 OB-fold nucleic acid binding domain JHW28_RS05600 PF12146 Serine aminopeptidase, S33 JHW28_RS05610 PF05736 OprF membrane domain JHW28_RS05610 PF00691 OmpA family JHW28_RS05625 PF00311 Phosphoenolpyruvate carboxylase JHW28_RS05630 PF05191 Adenylate kinase, active site lid JHW28_RS05635 PF00814 Glycoprotease family JHW28_RS05645 PF01904 Protein of unknown function DUF72 JHW28_RS05660 PF04445 Putative SAM-dependent methyltransferase JHW28_RS05670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS05675 PF00873 AcrB/AcrD/AcrF family JHW28_RS05690 PF01553 Acyltransferase JHW28_RS05695 PF00313 'Cold-shock' DNA-binding domain JHW28_RS05705 PF13847 Methyltransferase domain JHW28_RS05710 PF07687 Peptidase dimerisation domain JHW28_RS05710 PF01546 Peptidase family M20/M25/M40 JHW28_RS05715 PF00535 Glycosyl transferase family 2 JHW28_RS05720 PF00899 ThiF family JHW28_RS05725 PF02657 Fe-S metabolism associated domain JHW28_RS05730 PF00266 Aminotransferase class-V JHW28_RS05735 PF14602 Hexapeptide repeat of succinyl-transferase JHW28_RS05735 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JHW28_RS05740 PF03960 ArsC family JHW28_RS05745 PF00999 Sodium/hydrogen exchanger family JHW28_RS05750 PF00155 Aminotransferase class I and II JHW28_RS05755 PF08335 GlnD PII-uridylyltransferase JHW28_RS05755 PF01966 HD domain JHW28_RS05755 PF01909 Nucleotidyltransferase domain JHW28_RS05760 PF00557 Metallopeptidase family M24 JHW28_RS05765 PF00318 Ribosomal protein S2 JHW28_RS05770 PF00889 Elongation factor TS JHW28_RS05775 PF00696 Amino acid kinase family JHW28_RS05780 PF01765 Ribosome recycling factor JHW28_RS05785 PF01255 Putative undecaprenyl diphosphate synthase JHW28_RS05795 PF13288 DXP reductoisomerase C-terminal domain JHW28_RS05795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JHW28_RS05795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JHW28_RS05800 PF02163 Peptidase family M50 JHW28_RS05800 PF17820 PDZ domain JHW28_RS05800 PF13180 PDZ domain JHW28_RS05805 PF01103 Surface antigen JHW28_RS05805 PF07244 Surface antigen variable number repeat JHW28_RS05810 PF03938 Outer membrane protein (OmpH-like) JHW28_RS05815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JHW28_RS05815 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS05820 PF07977 FabA-like domain JHW28_RS05825 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS05825 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JHW28_RS05830 PF02684 Lipid-A-disaccharide synthetase JHW28_RS05835 PF01351 Ribonuclease HII JHW28_RS05840 PF01336 OB-fold nucleic acid binding domain JHW28_RS05840 PF02811 PHP domain JHW28_RS05840 PF14579 Helix-hairpin-helix motif JHW28_RS05840 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHW28_RS05840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHW28_RS05845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JHW28_RS05850 PF01171 PP-loop family JHW28_RS05850 PF09179 TilS substrate binding domain JHW28_RS05850 PF11734 TilS substrate C-terminal domain JHW28_RS05855 PF06418 CTP synthase N-terminus JHW28_RS05855 PF00117 Glutamine amidotransferase class-I JHW28_RS05860 PF00793 DAHP synthetase I family JHW28_RS05865 PF00113 Enolase, C-terminal TIM barrel domain JHW28_RS05865 PF03952 Enolase, N-terminal domain JHW28_RS05870 PF04977 Septum formation initiator JHW28_RS05875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHW28_RS05880 PF03466 LysR substrate binding domain JHW28_RS05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS05885 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS05885 PF00107 Zinc-binding dehydrogenase JHW28_RS05890 PF00756 Putative esterase JHW28_RS05895 PF02542 YgbB family JHW28_RS05900 PF01142 tRNA pseudouridine synthase D (TruD) JHW28_RS05905 PF01975 Survival protein SurE JHW28_RS05915 PF01551 Peptidase family M23 JHW28_RS05915 PF01476 LysM domain JHW28_RS05920 PF00140 Sigma-70 factor, region 1.2 JHW28_RS05920 PF04542 Sigma-70 region 2 JHW28_RS05920 PF04539 Sigma-70 region 3 JHW28_RS05920 PF04545 Sigma-70, region 4 JHW28_RS05925 PF11953 Domain of unknown function (DUF3470) JHW28_RS05925 PF00037 4Fe-4S binding domain JHW28_RS05930 PF05192 MutS domain III JHW28_RS05930 PF05190 MutS family domain IV JHW28_RS05930 PF00488 MutS domain V JHW28_RS05930 PF01624 MutS domain I JHW28_RS05930 PF05188 MutS domain II JHW28_RS05935 PF01381 Helix-turn-helix JHW28_RS05935 PF00717 Peptidase S24-like JHW28_RS05955 PF01510 N-acetylmuramoyl-L-alanine amidase JHW28_RS06050 PF17482 Phage tail sheath C-terminal domain JHW28_RS06050 PF04984 Phage tail sheath protein subtilisin-like domain JHW28_RS06085 PF07409 Phage protein GP46 JHW28_RS06115 PF02413 Caudovirales tail fibre assembly protein, lambda gpK JHW28_RS06130 PF00182 Chitinase class I JHW28_RS06140 PF02464 Competence-damaged protein JHW28_RS06145 PF00154 recA bacterial DNA recombination protein JHW28_RS06150 PF02631 RecX family JHW28_RS06170 PF03942 DTW domain JHW28_RS06175 PF00072 Response regulator receiver domain JHW28_RS06175 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS06180 PF01219 Prokaryotic diacylglycerol kinase JHW28_RS06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS06185 PF03466 LysR substrate binding domain JHW28_RS06190 PF00175 Oxidoreductase NAD-binding domain JHW28_RS06190 PF00970 Oxidoreductase FAD-binding domain JHW28_RS06195 PF18389 TrmO C-terminal domain JHW28_RS06195 PF01980 tRNA-methyltransferase O JHW28_RS06205 PF07308 Protein of unknown function (DUF1456) JHW28_RS06210 PF00849 RNA pseudouridylate synthase JHW28_RS06210 PF01479 S4 domain JHW28_RS06215 PF13673 Acetyltransferase (GNAT) domain JHW28_RS06220 PF04055 Radical SAM superfamily JHW28_RS06220 PF18693 TRAM domain JHW28_RS06220 PF00919 Uncharacterized protein family UPF0004 JHW28_RS06225 PF02705 K+ potassium transporter JHW28_RS06235 PF03706 Lysylphosphatidylglycerol synthase TM region JHW28_RS06235 PF09924 Uncharacterised conserved protein (DUF2156) JHW28_RS06250 PF11798 IMS family HHH motif JHW28_RS06250 PF00817 impB/mucB/samB family JHW28_RS06260 PF04073 Aminoacyl-tRNA editing domain JHW28_RS06260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHW28_RS06260 PF03129 Anticodon binding domain JHW28_RS06265 PF07690 Major Facilitator Superfamily JHW28_RS06285 PF00313 'Cold-shock' DNA-binding domain JHW28_RS06290 PF00692 dUTPase JHW28_RS06300 PF00005 ABC transporter JHW28_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS06320 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS06325 PF01804 Penicillin amidase JHW28_RS06330 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS06330 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS06340 PF02810 SEC-C motif JHW28_RS06340 PF01043 SecA preprotein cross-linking domain JHW28_RS06340 PF07516 SecA Wing and Scaffold domain JHW28_RS06340 PF07517 SecA DEAD-like domain JHW28_RS06350 PF02810 SEC-C motif JHW28_RS06360 PF05736 OprF membrane domain JHW28_RS06360 PF00691 OmpA family JHW28_RS06365 PF00691 OmpA family JHW28_RS06385 PF13307 Helicase C-terminal domain JHW28_RS06385 PF06733 DEAD_2 JHW28_RS06390 PF02449 Beta-galactosidase JHW28_RS06390 PF17992 Agarase CBM like domain JHW28_RS06395 PF00144 Beta-lactamase JHW28_RS06400 PF00223 Photosystem I psaA/psaB protein JHW28_RS06400 PF00691 OmpA family JHW28_RS06405 PF01243 Pyridoxamine 5'-phosphate oxidase JHW28_RS06405 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JHW28_RS06420 PF06965 Na+/H+ antiporter 1 JHW28_RS06425 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS06445 PF03466 LysR substrate binding domain JHW28_RS06445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS06460 PF05114 Protein of unknown function (DUF692) JHW28_RS06470 PF00005 ABC transporter JHW28_RS06475 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS06475 PF00005 ABC transporter JHW28_RS06480 PF11862 Domain of unknown function (DUF3382) JHW28_RS06480 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS06485 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS06490 PF13458 Periplasmic binding protein JHW28_RS06505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHW28_RS06505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS06510 PF00563 EAL domain JHW28_RS06510 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS06510 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS06515 PF03692 Putative zinc- or iron-chelating domain JHW28_RS06520 PF07690 Major Facilitator Superfamily JHW28_RS06525 PF18337 RapA N-terminal Tudor like domain JHW28_RS06525 PF00176 SNF2 family N-terminal domain JHW28_RS06525 PF18339 RapA N-terminal Tudor like domain 1 JHW28_RS06525 PF12137 RNA polymerase recycling family C-terminal JHW28_RS06525 PF00271 Helicase conserved C-terminal domain JHW28_RS06540 PF01384 Phosphate transporter family JHW28_RS06555 PF09339 IclR helix-turn-helix domain JHW28_RS06555 PF01614 Bacterial transcriptional regulator JHW28_RS06560 PF07690 Major Facilitator Superfamily JHW28_RS06565 PF01144 Coenzyme A transferase JHW28_RS06570 PF01144 Coenzyme A transferase JHW28_RS06575 PF02803 Thiolase, C-terminal domain JHW28_RS06575 PF00108 Thiolase, N-terminal domain JHW28_RS06580 PF00775 Dioxygenase JHW28_RS06580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JHW28_RS06585 PF00775 Dioxygenase JHW28_RS06590 PF00083 Sugar (and other) transporter JHW28_RS06595 PF10397 Adenylosuccinate lyase C-terminus JHW28_RS06595 PF00206 Lyase JHW28_RS06600 PF12146 Serine aminopeptidase, S33 JHW28_RS06605 PF02627 Carboxymuconolactone decarboxylase family JHW28_RS06610 PF03573 outer membrane porin, OprD family JHW28_RS06615 PF02321 Outer membrane efflux protein JHW28_RS06620 PF00873 AcrB/AcrD/AcrF family JHW28_RS06625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS06625 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS06630 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS06630 PF08361 MAATS-type transcriptional repressor, C-terminal region JHW28_RS06640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS06645 PF07690 Major Facilitator Superfamily JHW28_RS06675 PF00144 Beta-lactamase JHW28_RS06685 PF01546 Peptidase family M20/M25/M40 JHW28_RS06685 PF07687 Peptidase dimerisation domain JHW28_RS06690 PF07690 Major Facilitator Superfamily JHW28_RS06695 PF01425 Amidase JHW28_RS06710 PF13091 PLD-like domain JHW28_RS06715 PF14310 Fibronectin type III-like domain JHW28_RS06715 PF00933 Glycosyl hydrolase family 3 N terminal domain JHW28_RS06715 PF01915 Glycosyl hydrolase family 3 C-terminal domain JHW28_RS06720 PF04011 LemA family JHW28_RS06725 PF04536 TPM domain JHW28_RS06740 PF00892 EamA-like transporter family JHW28_RS06745 PF01965 DJ-1/PfpI family JHW28_RS06760 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS06760 PF00593 TonB dependent receptor JHW28_RS06770 PF08281 Sigma-70, region 4 JHW28_RS06770 PF04542 Sigma-70 region 2 JHW28_RS06775 PF07411 Domain of unknown function (DUF1508) JHW28_RS06780 PF00701 Dihydrodipicolinate synthetase family JHW28_RS06785 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS06790 PF01381 Helix-turn-helix JHW28_RS06790 PF08671 Anti-repressor SinI JHW28_RS06800 PF00465 Iron-containing alcohol dehydrogenase JHW28_RS06810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHW28_RS06820 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS06820 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS06820 PF00563 EAL domain JHW28_RS06850 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS06850 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS06860 PF01266 FAD dependent oxidoreductase JHW28_RS06865 PF05544 Proline racemase JHW28_RS06870 PF00701 Dihydrodipicolinate synthetase family JHW28_RS06875 PF13520 Amino acid permease JHW28_RS06880 PF00171 Aldehyde dehydrogenase family JHW28_RS06885 PF02615 Malate/L-lactate dehydrogenase JHW28_RS06905 PF03466 LysR substrate binding domain JHW28_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS06910 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS06910 PF00563 EAL domain JHW28_RS06910 PF08448 PAS fold JHW28_RS06910 PF08447 PAS fold JHW28_RS06920 PF03797 Autotransporter beta-domain JHW28_RS06920 PF03212 Pertactin JHW28_RS06930 PF00561 alpha/beta hydrolase fold JHW28_RS06935 PF01479 S4 domain JHW28_RS06935 PF00849 RNA pseudouridylate synthase JHW28_RS06945 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS06945 PF00072 Response regulator receiver domain JHW28_RS06960 PF03167 Uracil DNA glycosylase superfamily JHW28_RS06970 PF01970 Tripartite tricarboxylate transporter TctA family JHW28_RS06985 PF03573 outer membrane porin, OprD family JHW28_RS06990 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS06990 PF00072 Response regulator receiver domain JHW28_RS06995 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS07005 PF01571 Aminomethyltransferase folate-binding domain JHW28_RS07010 PF03937 Flavinator of succinate dehydrogenase JHW28_RS07020 PF02910 Fumarate reductase flavoprotein C-term JHW28_RS07020 PF00890 FAD binding domain JHW28_RS07025 PF08281 Sigma-70, region 4 JHW28_RS07025 PF04542 Sigma-70 region 2 JHW28_RS07030 PF03873 Anti sigma-E protein RseA, C-terminal domain JHW28_RS07030 PF03872 Anti sigma-E protein RseA, N-terminal domain JHW28_RS07035 PF03888 MucB/RseB N-terminal domain JHW28_RS07035 PF17188 MucB/RseB C-terminal domain JHW28_RS07040 PF13180 PDZ domain JHW28_RS07045 PF01435 Peptidase family M48 JHW28_RS07050 PF01206 Sulfurtransferase TusA JHW28_RS07055 PF01594 AI-2E family transporter JHW28_RS07060 PF00578 AhpC/TSA family JHW28_RS07070 PF00701 Dihydrodipicolinate synthetase family JHW28_RS07075 PF06804 NlpB/DapX lipoprotein JHW28_RS07080 PF00753 Metallo-beta-lactamase superfamily JHW28_RS07085 PF01259 SAICAR synthetase JHW28_RS07105 PF00072 Response regulator receiver domain JHW28_RS07105 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS07115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JHW28_RS07115 PF02753 Pili assembly chaperone PapD, C-terminal domain JHW28_RS07120 PF13953 PapC C-terminal domain JHW28_RS07120 PF13954 PapC N-terminal domain JHW28_RS07120 PF00577 Outer membrane usher protein JHW28_RS07125 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JHW28_RS07125 PF02753 Pili assembly chaperone PapD, C-terminal domain JHW28_RS07130 PF08479 POTRA domain, ShlB-type JHW28_RS07130 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JHW28_RS07135 PF05860 haemagglutination activity domain JHW28_RS07145 PF03466 LysR substrate binding domain JHW28_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07155 PF03466 LysR substrate binding domain JHW28_RS07165 PF07690 Major Facilitator Superfamily JHW28_RS07170 PF02560 Cyanate lyase C-terminal domain JHW28_RS07175 PF00484 Carbonic anhydrase JHW28_RS07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07180 PF03466 LysR substrate binding domain JHW28_RS07185 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS07190 PF08019 Phosphoethanolamine transferase EptA/EptB JHW28_RS07190 PF00884 Sulfatase JHW28_RS07200 PF00570 HRDC domain JHW28_RS07200 PF01612 3'-5' exonuclease JHW28_RS07205 PF05166 YcgL domain JHW28_RS07210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS07215 PF00881 Nitroreductase family JHW28_RS07220 PF03692 Putative zinc- or iron-chelating domain JHW28_RS07240 PF01844 HNH endonuclease JHW28_RS07260 PF00326 Prolyl oligopeptidase family JHW28_RS07260 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHW28_RS07270 PF13230 Glutamine amidotransferases class-II JHW28_RS07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07280 PF03466 LysR substrate binding domain JHW28_RS07285 PF07690 Major Facilitator Superfamily JHW28_RS07290 PF03746 LamB/YcsF family JHW28_RS07295 PF02682 Carboxyltransferase domain, subdomain C and D JHW28_RS07300 PF02626 Carboxyltransferase domain, subdomain A and B JHW28_RS07310 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS07310 PF02861 Clp amino terminal domain, pathogenicity island component JHW28_RS07310 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS07310 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS07310 PF17871 AAA lid domain JHW28_RS07320 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS07350 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JHW28_RS07355 PF11898 Domain of unknown function (DUF3418) JHW28_RS07355 PF00271 Helicase conserved C-terminal domain JHW28_RS07355 PF00270 DEAD/DEAH box helicase JHW28_RS07355 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JHW28_RS07355 PF04408 Helicase associated domain (HA2) JHW28_RS07360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHW28_RS07360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHW28_RS07365 PF04542 Sigma-70 region 2 JHW28_RS07365 PF08281 Sigma-70, region 4 JHW28_RS07375 PF07396 Phosphate-selective porin O and P JHW28_RS07380 PF03222 Tryptophan/tyrosine permease family JHW28_RS07385 PF01425 Amidase JHW28_RS07390 PF01593 Flavin containing amine oxidoreductase JHW28_RS07400 PF00355 Rieske [2Fe-2S] domain JHW28_RS07400 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JHW28_RS07405 PF00175 Oxidoreductase NAD-binding domain JHW28_RS07405 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS07415 PF07690 Major Facilitator Superfamily JHW28_RS07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07420 PF03466 LysR substrate binding domain JHW28_RS07430 PF00230 Major intrinsic protein JHW28_RS07435 PF00664 ABC transporter transmembrane region JHW28_RS07435 PF00005 ABC transporter JHW28_RS07440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHW28_RS07445 PF00561 alpha/beta hydrolase fold JHW28_RS07460 PF02525 Flavodoxin-like fold JHW28_RS07465 PF00892 EamA-like transporter family JHW28_RS07470 PF00924 Mechanosensitive ion channel JHW28_RS07475 PF00271 Helicase conserved C-terminal domain JHW28_RS07475 PF00270 DEAD/DEAH box helicase JHW28_RS07500 PF12833 Helix-turn-helix domain JHW28_RS07535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS07540 PF00892 EamA-like transporter family JHW28_RS07550 PF03466 LysR substrate binding domain JHW28_RS07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07560 PF16123 Hydroxyacylglutathione hydrolase C-terminus JHW28_RS07560 PF00753 Metallo-beta-lactamase superfamily JHW28_RS07565 PF00474 Sodium:solute symporter family JHW28_RS07580 PF00491 Arginase family JHW28_RS07585 PF03466 LysR substrate binding domain JHW28_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS07595 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS07600 PF03412 Peptidase C39 family JHW28_RS07600 PF00005 ABC transporter JHW28_RS07600 PF00664 ABC transporter transmembrane region JHW28_RS07605 PF02321 Outer membrane efflux protein JHW28_RS07620 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS07620 PF13188 PAS domain JHW28_RS07620 PF00563 EAL domain JHW28_RS07620 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS07630 PF04304 Protein of unknown function (DUF454) JHW28_RS07640 PF09382 RQC domain JHW28_RS07640 PF16124 RecQ zinc-binding JHW28_RS07640 PF00570 HRDC domain JHW28_RS07640 PF00271 Helicase conserved C-terminal domain JHW28_RS07640 PF00270 DEAD/DEAH box helicase JHW28_RS07655 PF01734 Patatin-like phospholipase JHW28_RS07670 PF12833 Helix-turn-helix domain JHW28_RS07690 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS07690 PF12833 Helix-turn-helix domain JHW28_RS07695 PF02386 Cation transport protein JHW28_RS07705 PF16750 Sensor domain of 2-component histidine kinase JHW28_RS07705 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS07705 PF00672 HAMP domain JHW28_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS07715 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS07715 PF00072 Response regulator receiver domain JHW28_RS07725 PF03795 YCII-related domain JHW28_RS07730 PF04279 Intracellular septation protein A JHW28_RS07735 PF02811 PHP domain JHW28_RS07740 PF01300 Telomere recombination JHW28_RS07745 PF02616 Segregation and condensation protein ScpA JHW28_RS07750 PF04079 Segregation and condensation complex subunit ScpB JHW28_RS07755 PF01479 S4 domain JHW28_RS07755 PF00849 RNA pseudouridylate synthase JHW28_RS07770 PF00324 Amino acid permease JHW28_RS07775 PF00472 RF-1 domain JHW28_RS07780 PF07690 Major Facilitator Superfamily JHW28_RS07790 PF00155 Aminotransferase class I and II JHW28_RS07795 PF01329 Pterin 4 alpha carbinolamine dehydratase JHW28_RS07800 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JHW28_RS07805 PF18024 Helix-turn-helix domain JHW28_RS07805 PF00158 Sigma-54 interaction domain JHW28_RS07810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHW28_RS07810 PF00460 Flagella basal body rod protein JHW28_RS07815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHW28_RS07815 PF00460 Flagella basal body rod protein JHW28_RS07820 PF02107 Flagellar L-ring protein JHW28_RS07825 PF02119 Flagellar P-ring protein JHW28_RS07830 PF10135 Rod binding protein JHW28_RS07830 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JHW28_RS07835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHW28_RS07835 PF00460 Flagella basal body rod protein JHW28_RS07845 PF00535 Glycosyl transferase family 2 JHW28_RS07850 PF00483 Nucleotidyl transferase JHW28_RS07855 PF16363 GDP-mannose 4,6 dehydratase JHW28_RS07860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JHW28_RS07865 PF08484 C-methyltransferase C-terminal domain JHW28_RS07865 PF08421 Putative zinc binding domain JHW28_RS07870 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS07875 PF08484 C-methyltransferase C-terminal domain JHW28_RS07875 PF08421 Putative zinc binding domain JHW28_RS07880 PF04989 Cephalosporin hydroxylase JHW28_RS07885 PF00535 Glycosyl transferase family 2 JHW28_RS07890 PF02719 Polysaccharide biosynthesis protein JHW28_RS07895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS07900 PF02348 Cytidylyltransferase JHW28_RS07910 PF03102 NeuB family JHW28_RS07910 PF08666 SAF domain JHW28_RS07915 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHW28_RS07915 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHW28_RS07930 PF00700 Bacterial flagellin C-terminal helical region JHW28_RS07930 PF07196 Flagellin hook IN motif JHW28_RS07930 PF00669 Bacterial flagellin N-terminal helical region JHW28_RS07935 PF03646 FlaG protein JHW28_RS07940 PF07196 Flagellin hook IN motif JHW28_RS07940 PF02465 Flagellar hook-associated protein 2 N-terminus JHW28_RS07940 PF07195 Flagellar hook-associated protein 2 C-terminus JHW28_RS07945 PF02561 Flagellar protein FliS JHW28_RS07955 PF00158 Sigma-54 interaction domain JHW28_RS07955 PF02954 Bacterial regulatory protein, Fis family JHW28_RS07955 PF06490 Flagellar regulatory protein FleQ JHW28_RS07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS07960 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS07960 PF13188 PAS domain JHW28_RS07965 PF00158 Sigma-54 interaction domain JHW28_RS07965 PF00072 Response regulator receiver domain JHW28_RS07965 PF02954 Bacterial regulatory protein, Fis family JHW28_RS07970 PF02049 Flagellar hook-basal body complex protein FliE JHW28_RS07975 PF01514 Secretory protein of YscJ/FliF family JHW28_RS07975 PF08345 Flagellar M-ring protein C-terminal JHW28_RS07980 PF01706 FliG C-terminal domain JHW28_RS07980 PF14841 FliG middle domain JHW28_RS07980 PF14842 FliG N-terminal domain JHW28_RS07990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHW28_RS07990 PF18269 T3SS EscN ATPase C-terminal domain JHW28_RS08000 PF13466 STAS domain JHW28_RS08005 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS08005 PF00072 Response regulator receiver domain JHW28_RS08025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHW28_RS08025 PF02154 Flagellar motor switch protein FliM JHW28_RS08030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHW28_RS08035 PF04347 Flagellar biosynthesis protein, FliO JHW28_RS08040 PF00813 FliP family JHW28_RS08045 PF01313 Bacterial export proteins, family 3 JHW28_RS08050 PF01311 Bacterial export proteins, family 1 JHW28_RS08055 PF01312 FlhB HrpN YscU SpaS Family JHW28_RS08060 PF00771 FHIPEP family JHW28_RS08065 PF00448 SRP54-type protein, GTPase domain JHW28_RS08070 PF10609 NUBPL iron-transfer P-loop NTPase JHW28_RS08075 PF04545 Sigma-70, region 4 JHW28_RS08075 PF04539 Sigma-70 region 3 JHW28_RS08075 PF04542 Sigma-70 region 2 JHW28_RS08080 PF00072 Response regulator receiver domain JHW28_RS08085 PF04344 Chemotaxis phosphatase, CheZ JHW28_RS08090 PF01584 CheW-like domain JHW28_RS08090 PF02895 Signal transducing histidine kinase, homodimeric domain JHW28_RS08090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS08090 PF01627 Hpt domain JHW28_RS08090 PF00072 Response regulator receiver domain JHW28_RS08095 PF01339 CheB methylesterase JHW28_RS08095 PF00072 Response regulator receiver domain JHW28_RS08100 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS08105 PF00691 OmpA family JHW28_RS08105 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHW28_RS08110 PF13614 AAA domain JHW28_RS08120 PF01584 CheW-like domain JHW28_RS08130 PF01312 FlhB HrpN YscU SpaS Family JHW28_RS08140 PF00005 ABC transporter JHW28_RS08145 PF03379 CcmB protein JHW28_RS08150 PF01578 Cytochrome C assembly protein JHW28_RS08155 PF04995 Heme exporter protein D (CcmD) JHW28_RS08160 PF03100 CcmE JHW28_RS08165 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JHW28_RS08165 PF01578 Cytochrome C assembly protein JHW28_RS08170 PF08534 Redoxin JHW28_RS08175 PF03918 Cytochrome C biogenesis protein JHW28_RS08195 PF03466 LysR substrate binding domain JHW28_RS08195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS08200 PF07690 Major Facilitator Superfamily JHW28_RS08220 PF00027 Cyclic nucleotide-binding domain JHW28_RS08220 PF00520 Ion transport protein JHW28_RS08225 PF03253 Urea transporter JHW28_RS08230 PF00224 Pyruvate kinase, barrel domain JHW28_RS08230 PF02887 Pyruvate kinase, alpha/beta domain JHW28_RS08235 PF05161 MOFRL family JHW28_RS08235 PF13660 Domain of unknown function (DUF4147) JHW28_RS08240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHW28_RS08240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS08245 PF01261 Xylose isomerase-like TIM barrel JHW28_RS08250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHW28_RS08250 PF00205 Thiamine pyrophosphate enzyme, central domain JHW28_RS08250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHW28_RS08260 PF08362 YcdC-like protein, C-terminal region JHW28_RS08260 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS08265 PF05661 Protein of unknown function (DUF808) JHW28_RS08270 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS08270 PF00155 Aminotransferase class I and II JHW28_RS08290 PF01810 LysE type translocator JHW28_RS08295 PF16861 Carbamoyltransferase C-terminus JHW28_RS08295 PF02543 Carbamoyltransferase N-terminus JHW28_RS08305 PF00202 Aminotransferase class-III JHW28_RS08310 PF02911 Formyl transferase, C-terminal domain JHW28_RS08310 PF00551 Formyl transferase JHW28_RS08320 PF01810 LysE type translocator JHW28_RS08325 PF04632 Fusaric acid resistance protein family JHW28_RS08330 PF04333 MlaA lipoprotein JHW28_RS08350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHW28_RS08355 PF04341 Protein of unknown function, DUF485 JHW28_RS08360 PF00474 Sodium:solute symporter family JHW28_RS08365 PF00285 Citrate synthase, C-terminal domain JHW28_RS08370 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHW28_RS08375 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHW28_RS08380 PF00890 FAD binding domain JHW28_RS08380 PF02910 Fumarate reductase flavoprotein C-term JHW28_RS08385 PF13085 2Fe-2S iron-sulfur cluster binding domain JHW28_RS08390 PF16870 2-oxoglutarate dehydrogenase C-terminal JHW28_RS08390 PF00676 Dehydrogenase E1 component JHW28_RS08390 PF16078 2-oxoglutarate dehydrogenase N-terminus JHW28_RS08390 PF02779 Transketolase, pyrimidine binding domain JHW28_RS08395 PF00364 Biotin-requiring enzyme JHW28_RS08395 PF02817 e3 binding domain JHW28_RS08395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHW28_RS08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS08400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHW28_RS08405 PF08442 ATP-grasp domain JHW28_RS08405 PF00549 CoA-ligase JHW28_RS08410 PF02629 CoA binding domain JHW28_RS08410 PF00549 CoA-ligase JHW28_RS08415 PF05525 Branched-chain amino acid transport protein JHW28_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS08445 PF00183 Hsp90 protein JHW28_RS08455 PF01053 Cys/Met metabolism PLP-dependent enzyme JHW28_RS08460 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS08460 PF00571 CBS domain JHW28_RS08465 PF02678 Pirin JHW28_RS08465 PF05726 Pirin C-terminal cupin domain JHW28_RS08485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS08485 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS08485 PF00672 HAMP domain JHW28_RS08490 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS08490 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS08495 PF07977 FabA-like domain JHW28_RS08500 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS08500 PF00072 Response regulator receiver domain JHW28_RS08500 PF01627 Hpt domain JHW28_RS08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS08500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHW28_RS08500 PF00672 HAMP domain JHW28_RS08510 PF00593 TonB dependent receptor JHW28_RS08510 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS08515 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JHW28_RS08515 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JHW28_RS08525 PF00300 Histidine phosphatase superfamily (branch 1) JHW28_RS08530 PF00501 AMP-binding enzyme JHW28_RS08535 PF03061 Thioesterase superfamily JHW28_RS08550 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS08550 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS08560 PF01594 AI-2E family transporter JHW28_RS08565 PF00672 HAMP domain JHW28_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS08565 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS08570 PF00072 Response regulator receiver domain JHW28_RS08570 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS08575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JHW28_RS08580 PF00107 Zinc-binding dehydrogenase JHW28_RS08580 PF16884 N-terminal domain of oxidoreductase JHW28_RS08590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS08590 PF16591 Helical bimodular sensor domain JHW28_RS08590 PF00672 HAMP domain JHW28_RS08620 PF07690 Major Facilitator Superfamily JHW28_RS08625 PF05860 haemagglutination activity domain JHW28_RS08635 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS08635 PF00072 Response regulator receiver domain JHW28_RS08635 PF00989 PAS fold JHW28_RS08635 PF01627 Hpt domain JHW28_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS08655 PF02272 DHHA1 domain JHW28_RS08655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHW28_RS08655 PF01411 tRNA synthetases class II (A) JHW28_RS08660 PF03466 LysR substrate binding domain JHW28_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS08670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS08670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS08670 PF09317 Domain of unknown function (DUF1974) JHW28_RS08670 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS08680 PF13417 Glutathione S-transferase, N-terminal domain JHW28_RS08680 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS08685 PF00005 ABC transporter JHW28_RS08690 PF01061 ABC-2 type transporter JHW28_RS08700 PF03772 Competence protein JHW28_RS08700 PF00753 Metallo-beta-lactamase superfamily JHW28_RS08705 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS08710 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS08715 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JHW28_RS08720 PF03966 Trm112p-like protein JHW28_RS08725 PF02348 Cytidylyltransferase JHW28_RS08730 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHW28_RS08735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JHW28_RS08735 PF01565 FAD binding domain JHW28_RS08740 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS08740 PF01799 [2Fe-2S] binding domain JHW28_RS08745 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JHW28_RS08745 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS08750 PF13478 XdhC Rossmann domain JHW28_RS08750 PF02625 XdhC and CoxI family JHW28_RS08760 PF10150 Ribonuclease E/G family JHW28_RS08760 PF12111 Polyribonucleotide phosphorylase C terminal JHW28_RS08760 PF00575 S1 RNA binding domain JHW28_RS08765 PF01479 S4 domain JHW28_RS08765 PF00849 RNA pseudouridylate synthase JHW28_RS08770 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS08775 PF01343 Peptidase family S49 JHW28_RS08775 PF06965 Na+/H+ antiporter 1 JHW28_RS08780 PF02545 Maf-like protein JHW28_RS08785 PF02620 Large ribosomal RNA subunit accumulation protein YceD JHW28_RS08790 PF01783 Ribosomal L32p protein family JHW28_RS08795 PF02504 Fatty acid synthesis protein JHW28_RS08800 PF00698 Acyl transferase domain JHW28_RS08810 PF00550 Phosphopantetheine attachment site JHW28_RS08815 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS08815 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS08820 PF01063 Amino-transferase class IV JHW28_RS08825 PF02618 YceG-like family JHW28_RS08830 PF02223 Thymidylate kinase JHW28_RS08835 PF09115 DNA polymerase III, delta subunit, C terminal JHW28_RS08840 PF01026 TatD related DNase JHW28_RS08845 PF00266 Aminotransferase class-V JHW28_RS08850 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS08855 PF04055 Radical SAM superfamily JHW28_RS08855 PF06463 Molybdenum Cofactor Synthesis C JHW28_RS08870 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS08870 PF07702 UTRA domain JHW28_RS08875 PF03747 ADP-ribosylglycohydrolase JHW28_RS08885 PF00294 pfkB family carbohydrate kinase JHW28_RS08915 PF01966 HD domain JHW28_RS08925 PF05035 2-keto-3-deoxy-galactonokinase JHW28_RS08930 PF01081 KDPG and KHG aldolase JHW28_RS08935 PF13378 Enolase C-terminal domain-like JHW28_RS08935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JHW28_RS08940 PF07690 Major Facilitator Superfamily JHW28_RS08945 PF09339 IclR helix-turn-helix domain JHW28_RS08945 PF01614 Bacterial transcriptional regulator JHW28_RS08950 PF00107 Zinc-binding dehydrogenase JHW28_RS08950 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS08955 PF12833 Helix-turn-helix domain JHW28_RS08955 PF06719 AraC-type transcriptional regulator N-terminus JHW28_RS08965 PF01012 Electron transfer flavoprotein domain JHW28_RS08970 PF00766 Electron transfer flavoprotein FAD-binding domain JHW28_RS08970 PF01012 Electron transfer flavoprotein domain JHW28_RS08985 PF00691 OmpA family JHW28_RS08985 PF05736 OprF membrane domain JHW28_RS08990 PF00155 Aminotransferase class I and II JHW28_RS08990 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS09000 PF03692 Putative zinc- or iron-chelating domain JHW28_RS09005 PF01852 START domain JHW28_RS09025 PF00108 Thiolase, N-terminal domain JHW28_RS09025 PF02803 Thiolase, C-terminal domain JHW28_RS09030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS09030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS09030 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS09035 PF00958 GMP synthase C terminal domain JHW28_RS09035 PF00117 Glutamine amidotransferase class-I JHW28_RS09035 PF02540 NAD synthase JHW28_RS09040 PF01544 CorA-like Mg2+ transporter protein JHW28_RS09045 PF01553 Acyltransferase JHW28_RS09095 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS09105 PF03466 LysR substrate binding domain JHW28_RS09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS09110 PF01177 Asp/Glu/Hydantoin racemase JHW28_RS09115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS09120 PF01507 Phosphoadenosine phosphosulfate reductase family JHW28_RS09130 PF04715 Anthranilate synthase component I, N terminal region JHW28_RS09130 PF00425 chorismate binding enzyme JHW28_RS09145 PF08443 RimK-like ATP-grasp domain JHW28_RS09145 PF18030 RimK PreATP-grasp domain JHW28_RS09150 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS09150 PF07729 FCD domain JHW28_RS09160 PF00285 Citrate synthase, C-terminal domain JHW28_RS09165 PF00330 Aconitase family (aconitate hydratase) JHW28_RS09165 PF00694 Aconitase C-terminal domain JHW28_RS09170 PF04303 PrpF protein JHW28_RS09175 PF03972 MmgE/PrpD family JHW28_RS09180 PF03618 Kinase/pyrophosphorylase JHW28_RS09185 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS09185 PF02896 PEP-utilising enzyme, TIM barrel domain JHW28_RS09185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JHW28_RS09195 PF03737 Aldolase/RraA JHW28_RS09200 PF01544 CorA-like Mg2+ transporter protein JHW28_RS09210 PF05552 Conserved TM helix JHW28_RS09220 PF05736 OprF membrane domain JHW28_RS09220 PF00691 OmpA family JHW28_RS09225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS09230 PF01568 Molydopterin dinucleotide binding domain JHW28_RS09230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHW28_RS09230 PF00384 Molybdopterin oxidoreductase JHW28_RS09230 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS09235 PF00355 Rieske [2Fe-2S] domain JHW28_RS09240 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHW28_RS09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS09240 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS09240 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS09240 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS09245 PF00069 Protein kinase domain JHW28_RS09250 PF07690 Major Facilitator Superfamily JHW28_RS09255 PF03861 ANTAR domain JHW28_RS09255 PF08376 Nitrate and nitrite sensing JHW28_RS09265 PF01180 Dihydroorotate dehydrogenase JHW28_RS09270 PF04957 Ribosome modulation factor JHW28_RS09275 PF10672 S-adenosylmethionine-dependent methyltransferase JHW28_RS09275 PF02926 THUMP domain JHW28_RS09275 PF01170 Putative RNA methylase family UPF0020 JHW28_RS09280 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS09285 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JHW28_RS09290 PF04320 Protein with unknown function (DUF469) JHW28_RS09295 PF03594 Benzoate membrane transport protein JHW28_RS09300 PF07729 FCD domain JHW28_RS09300 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS09305 PF01979 Amidohydrolase family JHW28_RS09315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JHW28_RS09315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS09320 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS09320 PF01799 [2Fe-2S] binding domain JHW28_RS09330 PF02463 RecF/RecN/SMC N terminal domain JHW28_RS09330 PF06470 SMC proteins Flexible Hinge Domain JHW28_RS09335 PF04354 ZipA, C-terminal FtsZ-binding domain JHW28_RS09340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JHW28_RS09340 PF03120 NAD-dependent DNA ligase OB-fold domain JHW28_RS09340 PF01653 NAD-dependent DNA ligase adenylation domain JHW28_RS09340 PF00533 BRCA1 C Terminus (BRCT) domain JHW28_RS09340 PF12826 Helix-hairpin-helix motif JHW28_RS09345 PF15887 Putative zinc-binding metallo-peptidase JHW28_RS09345 PF10005 zinc-ribbon domain JHW28_RS09360 PF03466 LysR substrate binding domain JHW28_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS09365 PF00892 EamA-like transporter family JHW28_RS09380 PF00563 EAL domain JHW28_RS09380 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS09380 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS09390 PF12169 DNA polymerase III subunits gamma and tau domain III JHW28_RS09390 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JHW28_RS09390 PF12170 DNA polymerase III tau subunit V interacting with alpha JHW28_RS09395 PF02575 YbaB/EbfC DNA-binding family JHW28_RS09400 PF00107 Zinc-binding dehydrogenase JHW28_RS09400 PF16884 N-terminal domain of oxidoreductase JHW28_RS09405 PF02132 RecR protein JHW28_RS09405 PF13662 Toprim domain JHW28_RS09410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS09410 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS09410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS09415 PF00156 Phosphoribosyl transferase domain JHW28_RS09420 PF13545 Crp-like helix-turn-helix domain JHW28_RS09420 PF00027 Cyclic nucleotide-binding domain JHW28_RS09425 PF06969 HemN C-terminal domain JHW28_RS09425 PF04055 Radical SAM superfamily JHW28_RS09440 PF00403 Heavy-metal-associated domain JHW28_RS09450 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JHW28_RS09450 PF13746 4Fe-4S dicluster domain JHW28_RS09450 PF12801 4Fe-4S binding domain JHW28_RS09465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS09465 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JHW28_RS09480 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS09485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS09485 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JHW28_RS09500 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS09510 PF08447 PAS fold JHW28_RS09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS09520 PF00694 Aconitase C-terminal domain JHW28_RS09520 PF00330 Aconitase family (aconitate hydratase) JHW28_RS09525 PF01728 FtsJ-like methyltransferase JHW28_RS09525 PF18125 RlmM ferredoxin-like domain JHW28_RS09530 PF01206 Sulfurtransferase TusA JHW28_RS09535 PF01554 MatE JHW28_RS09540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS09540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS09540 PF11890 Domain of unknown function (DUF3410) JHW28_RS09550 PF00664 ABC transporter transmembrane region JHW28_RS09550 PF00005 ABC transporter JHW28_RS09555 PF14718 Soluble lytic murein transglycosylase L domain JHW28_RS09555 PF01464 Transglycosylase SLT domain JHW28_RS09560 PF00005 ABC transporter JHW28_RS09560 PF16326 ABC transporter C-terminal domain JHW28_RS09560 PF12848 ABC transporter JHW28_RS09565 PF00582 Universal stress protein family JHW28_RS09575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS09575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS09575 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS09580 PF02803 Thiolase, C-terminal domain JHW28_RS09580 PF00108 Thiolase, N-terminal domain JHW28_RS09590 PF01751 Toprim domain JHW28_RS09590 PF01131 DNA topoisomerase JHW28_RS09590 PF01396 Topoisomerase DNA binding C4 zinc finger JHW28_RS09590 PF08272 Topoisomerase I zinc-ribbon-like JHW28_RS09605 PF03846 Cell division inhibitor SulA JHW28_RS09610 PF01726 LexA DNA binding domain JHW28_RS09610 PF00717 Peptidase S24-like JHW28_RS09615 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS09620 PF00933 Glycosyl hydrolase family 3 N terminal domain JHW28_RS09625 PF01048 Phosphorylase superfamily JHW28_RS09630 PF12419 SNF2 Helicase protein JHW28_RS09630 PF00271 Helicase conserved C-terminal domain JHW28_RS09630 PF00176 SNF2 family N-terminal domain JHW28_RS09640 PF02559 CarD-like/TRCF domain JHW28_RS09640 PF00270 DEAD/DEAH box helicase JHW28_RS09640 PF17757 UvrB interaction domain JHW28_RS09640 PF03461 TRCF domain JHW28_RS09640 PF00271 Helicase conserved C-terminal domain JHW28_RS09645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHW28_RS09645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHW28_RS09650 PF07690 Major Facilitator Superfamily JHW28_RS09655 PF02424 ApbE family JHW28_RS09660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHW28_RS09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS09665 PF03009 Glycerophosphoryl diester phosphodiesterase family JHW28_RS09675 PF12704 MacB-like periplasmic core domain JHW28_RS09675 PF02687 FtsX-like permease family JHW28_RS09680 PF00005 ABC transporter JHW28_RS09685 PF12704 MacB-like periplasmic core domain JHW28_RS09685 PF02687 FtsX-like permease family JHW28_RS09690 PF00672 HAMP domain JHW28_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS09690 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS09695 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS09695 PF00072 Response regulator receiver domain JHW28_RS09705 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JHW28_RS09705 PF14489 QueF-like protein JHW28_RS09720 PF04333 MlaA lipoprotein JHW28_RS09730 PF00158 Sigma-54 interaction domain JHW28_RS09730 PF02954 Bacterial regulatory protein, Fis family JHW28_RS09730 PF00072 Response regulator receiver domain JHW28_RS09740 PF00923 Transaldolase/Fructose-6-phosphate aldolase JHW28_RS09745 PF01207 Dihydrouridine synthase (Dus) JHW28_RS09750 PF02525 Flavodoxin-like fold JHW28_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS09755 PF03466 LysR substrate binding domain JHW28_RS09765 PF00563 EAL domain JHW28_RS09765 PF00360 Phytochrome region JHW28_RS09765 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS09765 PF01590 GAF domain JHW28_RS09775 PF00797 N-acetyltransferase JHW28_RS09790 PF00860 Permease family JHW28_RS09815 PF00155 Aminotransferase class I and II JHW28_RS09820 PF00271 Helicase conserved C-terminal domain JHW28_RS09820 PF12344 Ultra-violet resistance protein B JHW28_RS09820 PF02151 UvrB/uvrC motif JHW28_RS09820 PF04851 Type III restriction enzyme, res subunit JHW28_RS09820 PF17757 UvrB interaction domain JHW28_RS09825 PF07690 Major Facilitator Superfamily JHW28_RS09830 PF13533 Biotin-lipoyl like JHW28_RS09835 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHW28_RS09865 PF00561 alpha/beta hydrolase fold JHW28_RS09875 PF01207 Dihydrouridine synthase (Dus) JHW28_RS09880 PF00011 Hsp20/alpha crystallin family JHW28_RS09885 PF06889 Protein of unknown function (DUF1266) JHW28_RS09895 PF00012 Hsp70 protein JHW28_RS09900 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS09900 PF00563 EAL domain JHW28_RS09900 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS09910 PF00330 Aconitase family (aconitate hydratase) JHW28_RS09915 PF00694 Aconitase C-terminal domain JHW28_RS09920 PF00180 Isocitrate/isopropylmalate dehydrogenase JHW28_RS09925 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHW28_RS09925 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHW28_RS09930 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHW28_RS09930 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHW28_RS09945 PF01416 tRNA pseudouridine synthase JHW28_RS09950 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JHW28_RS09955 PF01039 Carboxyl transferase domain JHW28_RS09955 PF17848 Acetyl-coA carboxylase zinc finger domain JHW28_RS09960 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS09960 PF08245 Mur ligase middle domain JHW28_RS09965 PF05036 Sporulation related domain JHW28_RS09970 PF02674 Colicin V production protein JHW28_RS09975 PF00156 Phosphoribosyl transferase domain JHW28_RS09980 PF01053 Cys/Met metabolism PLP-dependent enzyme JHW28_RS10005 PF01266 FAD dependent oxidoreductase JHW28_RS10020 PF00300 Histidine phosphatase superfamily (branch 1) JHW28_RS10020 PF00293 NUDIX domain JHW28_RS10030 PF18416 N-acetylglucosamine binding protein domain 2 JHW28_RS10030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHW28_RS10035 PF00704 Glycosyl hydrolases family 18 JHW28_RS10050 PF02599 Global regulator protein family JHW28_RS10060 PF04231 Endonuclease I JHW28_RS10070 PF17763 Glutaminase/Asparaginase C-terminal domain JHW28_RS10070 PF00710 Asparaginase, N-terminal JHW28_RS10080 PF13407 Periplasmic binding protein domain JHW28_RS10085 PF00005 ABC transporter JHW28_RS10090 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS10095 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS10100 PF00294 pfkB family carbohydrate kinase JHW28_RS10105 PF05025 RbsD / FucU transport protein family JHW28_RS10110 PF01156 Inosine-uridine preferring nucleoside hydrolase JHW28_RS10130 PF00313 'Cold-shock' DNA-binding domain JHW28_RS10140 PF03129 Anticodon binding domain JHW28_RS10140 PF02824 TGS domain JHW28_RS10140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHW28_RS10140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHW28_RS10145 PF05198 Translation initiation factor IF-3, N-terminal domain JHW28_RS10145 PF00707 Translation initiation factor IF-3, C-terminal domain JHW28_RS10150 PF01632 Ribosomal protein L35 JHW28_RS10155 PF00453 Ribosomal protein L20 JHW28_RS10160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JHW28_RS10160 PF01409 tRNA synthetases class II core domain (F) JHW28_RS10165 PF03484 tRNA synthetase B5 domain JHW28_RS10165 PF01588 Putative tRNA binding domain JHW28_RS10165 PF03483 B3/4 domain JHW28_RS10165 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JHW28_RS10165 PF03147 Ferredoxin-fold anticodon binding domain JHW28_RS10170 PF00216 Bacterial DNA-binding protein JHW28_RS10190 PF00149 Calcineurin-like phosphoesterase JHW28_RS10510 PF00419 Fimbrial protein JHW28_RS10550 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS10550 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS10555 PF01638 HxlR-like helix-turn-helix JHW28_RS10585 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS10590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS10590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS10595 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS10595 PF12833 Helix-turn-helix domain JHW28_RS10600 PF01590 GAF domain JHW28_RS10600 PF02954 Bacterial regulatory protein, Fis family JHW28_RS10600 PF00158 Sigma-54 interaction domain JHW28_RS10605 PF01513 ATP-NAD kinase JHW28_RS10610 PF00676 Dehydrogenase E1 component JHW28_RS10615 PF02779 Transketolase, pyrimidine binding domain JHW28_RS10615 PF02780 Transketolase, C-terminal domain JHW28_RS10620 PF00561 alpha/beta hydrolase fold JHW28_RS10620 PF00364 Biotin-requiring enzyme JHW28_RS10625 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS10625 PF00107 Zinc-binding dehydrogenase JHW28_RS10645 PF12806 Acetyl-CoA dehydrogenase C-terminal like JHW28_RS10645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS10645 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS10645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS10650 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS10650 PF00501 AMP-binding enzyme JHW28_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS10655 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS10655 PF00989 PAS fold JHW28_RS10660 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS10660 PF00072 Response regulator receiver domain JHW28_RS10670 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JHW28_RS10705 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHW28_RS10705 PF00578 AhpC/TSA family JHW28_RS10720 PF00005 ABC transporter JHW28_RS10740 PF01381 Helix-turn-helix JHW28_RS10745 PF05973 Phage derived protein Gp49-like (DUF891) JHW28_RS10750 PF07063 Domain of unknown function (DUF1338) JHW28_RS10755 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS10755 PF05230 MASE2 domain JHW28_RS10760 PF01546 Peptidase family M20/M25/M40 JHW28_RS10760 PF07687 Peptidase dimerisation domain JHW28_RS10770 PF04958 Arginine N-succinyltransferase beta subunit JHW28_RS10775 PF04958 Arginine N-succinyltransferase beta subunit JHW28_RS10780 PF00324 Amino acid permease JHW28_RS10790 PF00120 Glutamine synthetase, catalytic domain JHW28_RS10790 PF03951 Glutamine synthetase, beta-Grasp domain JHW28_RS10795 PF00857 Isochorismatase family JHW28_RS10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS10805 PF03466 LysR substrate binding domain JHW28_RS10820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS10825 PF12833 Helix-turn-helix domain JHW28_RS10825 PF02311 AraC-like ligand binding domain JHW28_RS10835 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS10855 PF01566 Natural resistance-associated macrophage protein JHW28_RS10860 PF03928 Haem-degrading JHW28_RS10865 PF13183 4Fe-4S dicluster domain JHW28_RS10865 PF02754 Cysteine-rich domain JHW28_RS10870 PF01565 FAD binding domain JHW28_RS10875 PF02913 FAD linked oxidases, C-terminal domain JHW28_RS10875 PF01565 FAD binding domain JHW28_RS10880 PF07729 FCD domain JHW28_RS10880 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS10910 PF00107 Zinc-binding dehydrogenase JHW28_RS10910 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS10920 PF03502 Nucleoside-specific channel-forming protein, Tsx JHW28_RS10925 PF12951 Passenger-associated-transport-repeat JHW28_RS10930 PF00586 AIR synthase related protein, N-terminal domain JHW28_RS10930 PF02769 AIR synthase related protein, C-terminal domain JHW28_RS10940 PF03773 Predicted permease JHW28_RS10945 PF01614 Bacterial transcriptional regulator JHW28_RS10945 PF09339 IclR helix-turn-helix domain JHW28_RS10950 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS10955 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS10960 PF00005 ABC transporter JHW28_RS10965 PF01266 FAD dependent oxidoreductase JHW28_RS10975 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS10975 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS10980 PF02567 Phenazine biosynthesis-like protein JHW28_RS10985 PF12833 Helix-turn-helix domain JHW28_RS10985 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS10990 PF00743 Flavin-binding monooxygenase-like JHW28_RS10995 PF02541 Ppx/GppA phosphatase family JHW28_RS11000 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHW28_RS11015 PF01970 Tripartite tricarboxylate transporter TctA family JHW28_RS11020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHW28_RS11025 PF03435 Saccharopine dehydrogenase NADP binding domain JHW28_RS11025 PF16653 Saccharopine dehydrogenase C-terminal domain JHW28_RS11035 PF00011 Hsp20/alpha crystallin family JHW28_RS11040 PF00490 Delta-aminolevulinic acid dehydratase JHW28_RS11045 PF01494 FAD binding domain JHW28_RS11050 PF01810 LysE type translocator JHW28_RS11060 PF07759 Protein of unknown function (DUF1615) JHW28_RS11070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS11070 PF00005 ABC transporter JHW28_RS11075 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS11075 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS11080 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS11085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS11090 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS11090 PF00593 TonB dependent receptor JHW28_RS11095 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS11100 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS11105 PF03544 Gram-negative bacterial TonB protein C-terminal JHW28_RS11115 PF03061 Thioesterase superfamily JHW28_RS11120 PF06956 Regulator of RNA terminal phosphate cyclase JHW28_RS11120 PF00158 Sigma-54 interaction domain JHW28_RS11135 PF01139 tRNA-splicing ligase RtcB JHW28_RS11145 PF10127 RNA repair pathway DNA polymerase beta family JHW28_RS11150 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JHW28_RS11150 PF01137 RNA 3'-terminal phosphate cyclase JHW28_RS11170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHW28_RS11170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHW28_RS11175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11175 PF03466 LysR substrate binding domain JHW28_RS11180 PF07690 Major Facilitator Superfamily JHW28_RS11190 PF02803 Thiolase, C-terminal domain JHW28_RS11190 PF00108 Thiolase, N-terminal domain JHW28_RS11195 PF01144 Coenzyme A transferase JHW28_RS11200 PF01144 Coenzyme A transferase JHW28_RS11205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11205 PF03466 LysR substrate binding domain JHW28_RS11210 PF02146 Sir2 family JHW28_RS11220 PF05145 Transition state regulatory protein AbrB JHW28_RS11225 PF03466 LysR substrate binding domain JHW28_RS11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11230 PF00571 CBS domain JHW28_RS11235 PF01266 FAD dependent oxidoreductase JHW28_RS11245 PF13416 Bacterial extracellular solute-binding protein JHW28_RS11250 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS11255 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS11260 PF00005 ABC transporter JHW28_RS11260 PF08402 TOBE domain JHW28_RS11265 PF07722 Peptidase C26 JHW28_RS11270 PF00120 Glutamine synthetase, catalytic domain JHW28_RS11275 PF00171 Aldehyde dehydrogenase family JHW28_RS11280 PF01266 FAD dependent oxidoreductase JHW28_RS11285 PF01381 Helix-turn-helix JHW28_RS11285 PF07883 Cupin domain JHW28_RS11290 PF00570 HRDC domain JHW28_RS11290 PF13361 UvrD-like helicase C-terminal domain JHW28_RS11340 PF04542 Sigma-70 region 2 JHW28_RS11340 PF08281 Sigma-70, region 4 JHW28_RS11345 PF04773 FecR protein JHW28_RS11345 PF16220 Domain of unknown function (DUF4880) JHW28_RS11350 PF00593 TonB dependent receptor JHW28_RS11350 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS11350 PF07660 Secretin and TonB N terminus short domain JHW28_RS11355 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JHW28_RS11355 PF18381 YcaO cyclodehydratase C-terminal domain JHW28_RS11365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHW28_RS11370 PF02321 Outer membrane efflux protein JHW28_RS11380 PF00873 AcrB/AcrD/AcrF family JHW28_RS11390 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS11400 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS11405 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS11415 PF07690 Major Facilitator Superfamily JHW28_RS11435 PF00892 EamA-like transporter family JHW28_RS11440 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS11440 PF00155 Aminotransferase class I and II JHW28_RS11445 PF00672 HAMP domain JHW28_RS11445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS11445 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS11450 PF01740 STAS domain JHW28_RS11450 PF00916 Sulfate permease family JHW28_RS11460 PF02630 SCO1/SenC JHW28_RS11475 PF03466 LysR substrate binding domain JHW28_RS11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11480 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS11485 PF02447 GntP family permease JHW28_RS11490 PF01042 Endoribonuclease L-PSP JHW28_RS11495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11495 PF03466 LysR substrate binding domain JHW28_RS11500 PF02666 Phosphatidylserine decarboxylase JHW28_RS11505 PF01738 Dienelactone hydrolase family JHW28_RS11510 PF00455 DeoR C terminal sensor domain JHW28_RS11510 PF08220 DeoR-like helix-turn-helix domain JHW28_RS11515 PF17785 PUA-like domain JHW28_RS11515 PF10672 S-adenosylmethionine-dependent methyltransferase JHW28_RS11520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHW28_RS11525 PF01042 Endoribonuclease L-PSP JHW28_RS11530 PF12392 Collagenase JHW28_RS11530 PF01136 Peptidase family U32 JHW28_RS11540 PF12833 Helix-turn-helix domain JHW28_RS11540 PF01965 DJ-1/PfpI family JHW28_RS11545 PF02311 AraC-like ligand binding domain JHW28_RS11545 PF12833 Helix-turn-helix domain JHW28_RS11570 PF01066 CDP-alcohol phosphatidyltransferase JHW28_RS11585 PF12833 Helix-turn-helix domain JHW28_RS11585 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS11590 PF07690 Major Facilitator Superfamily JHW28_RS11600 PF02525 Flavodoxin-like fold JHW28_RS11610 PF11892 Domain of unknown function (DUF3412) JHW28_RS11610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JHW28_RS11610 PF03641 Possible lysine decarboxylase JHW28_RS11625 PF00072 Response regulator receiver domain JHW28_RS11625 PF02954 Bacterial regulatory protein, Fis family JHW28_RS11625 PF00158 Sigma-54 interaction domain JHW28_RS11640 PF00202 Aminotransferase class-III JHW28_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11645 PF03466 LysR substrate binding domain JHW28_RS11650 PF01593 Flavin containing amine oxidoreductase JHW28_RS11660 PF01266 FAD dependent oxidoreductase JHW28_RS11665 PF00120 Glutamine synthetase, catalytic domain JHW28_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11675 PF03466 LysR substrate binding domain JHW28_RS11680 PF00857 Isochorismatase family JHW28_RS11690 PF07969 Amidohydrolase family JHW28_RS11705 PF00136 DNA polymerase family B JHW28_RS11705 PF03104 DNA polymerase family B, exonuclease domain JHW28_RS11715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JHW28_RS11715 PF08548 Peptidase M10 serralysin C terminal JHW28_RS11720 PF00083 Sugar (and other) transporter JHW28_RS11720 PF07690 Major Facilitator Superfamily JHW28_RS11725 PF05199 GMC oxidoreductase JHW28_RS11725 PF00732 GMC oxidoreductase JHW28_RS11740 PF13474 SnoaL-like domain JHW28_RS11745 PF08713 DNA alkylation repair enzyme JHW28_RS11750 PF02254 TrkA-N domain JHW28_RS11750 PF00999 Sodium/hydrogen exchanger family JHW28_RS11755 PF03466 LysR substrate binding domain JHW28_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS11760 PF04303 PrpF protein JHW28_RS11765 PF00375 Sodium:dicarboxylate symporter family JHW28_RS11770 PF03600 Citrate transporter JHW28_RS11775 PF03573 outer membrane porin, OprD family JHW28_RS11780 PF01435 Peptidase family M48 JHW28_RS11785 PF04011 LemA family JHW28_RS11790 PF03109 ABC1 family JHW28_RS11800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS11805 PF02583 Metal-sensitive transcriptional repressor JHW28_RS11810 PF01545 Cation efflux family JHW28_RS11815 PF00561 alpha/beta hydrolase fold JHW28_RS11825 PF00067 Cytochrome P450 JHW28_RS11845 PF14403 Circularly permuted ATP-grasp type 2 JHW28_RS11850 PF04168 A predicted alpha-helical domain with a conserved ER motif. JHW28_RS11850 PF14403 Circularly permuted ATP-grasp type 2 JHW28_RS11855 PF01841 Transglutaminase-like superfamily JHW28_RS11855 PF08379 Bacterial transglutaminase-like N-terminal region JHW28_RS11860 PF01510 N-acetylmuramoyl-L-alanine amidase JHW28_RS11865 PF01063 Amino-transferase class IV JHW28_RS11870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS11870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHW28_RS11875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHW28_RS11875 PF00364 Biotin-requiring enzyme JHW28_RS11875 PF02817 e3 binding domain JHW28_RS11880 PF02779 Transketolase, pyrimidine binding domain JHW28_RS11880 PF02780 Transketolase, C-terminal domain JHW28_RS11885 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal JHW28_RS11885 PF00676 Dehydrogenase E1 component JHW28_RS11890 PF01037 Lrp/AsnC ligand binding domain JHW28_RS11900 PF01678 Diaminopimelate epimerase JHW28_RS11910 PF13533 Biotin-lipoyl like JHW28_RS11920 PF04234 CopC domain JHW28_RS11930 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS11930 PF08362 YcdC-like protein, C-terminal region JHW28_RS11935 PF01180 Dihydroorotate dehydrogenase JHW28_RS11940 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS11940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHW28_RS11945 PF01979 Amidohydrolase family JHW28_RS11950 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS11955 PF01546 Peptidase family M20/M25/M40 JHW28_RS11955 PF07687 Peptidase dimerisation domain JHW28_RS11960 PF09084 NMT1/THI5 like JHW28_RS11965 PF00571 CBS domain JHW28_RS11965 PF00005 ABC transporter JHW28_RS11975 PF01625 Peptide methionine sulfoxide reductase JHW28_RS11980 PF02321 Outer membrane efflux protein JHW28_RS11985 PF13533 Biotin-lipoyl like JHW28_RS11990 PF00873 AcrB/AcrD/AcrF family JHW28_RS12005 PF12680 SnoaL-like domain JHW28_RS12005 PF08281 Sigma-70, region 4 JHW28_RS12005 PF04542 Sigma-70 region 2 JHW28_RS12015 PF12102 Domain of unknown function (DUF3578) JHW28_RS12015 PF07728 AAA domain (dynein-related subfamily) JHW28_RS12060 PF04143 Sulphur transport JHW28_RS12080 PF01925 Sulfite exporter TauE/SafE JHW28_RS12085 PF00890 FAD binding domain JHW28_RS12085 PF02910 Fumarate reductase flavoprotein C-term JHW28_RS12090 PF00753 Metallo-beta-lactamase superfamily JHW28_RS12095 PF00158 Sigma-54 interaction domain JHW28_RS12095 PF02954 Bacterial regulatory protein, Fis family JHW28_RS12095 PF00072 Response regulator receiver domain JHW28_RS12105 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS12105 PF00072 Response regulator receiver domain JHW28_RS12120 PF00672 HAMP domain JHW28_RS12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS12120 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS12125 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS12125 PF00072 Response regulator receiver domain JHW28_RS12145 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS12145 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS12150 PF01266 FAD dependent oxidoreductase JHW28_RS12170 PF01418 Helix-turn-helix domain, rpiR family JHW28_RS12170 PF01380 SIS domain JHW28_RS12175 PF00294 pfkB family carbohydrate kinase JHW28_RS12180 PF01261 Xylose isomerase-like TIM barrel JHW28_RS12185 PF04962 KduI/IolB family JHW28_RS12190 PF00171 Aldehyde dehydrogenase family JHW28_RS12200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHW28_RS12200 PF00205 Thiamine pyrophosphate enzyme, central domain JHW28_RS12200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHW28_RS12205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS12205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS12210 PF01261 Xylose isomerase-like TIM barrel JHW28_RS12215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS12215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS12225 PF13407 Periplasmic binding protein domain JHW28_RS12230 PF00005 ABC transporter JHW28_RS12235 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS12240 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHW28_RS12245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS12285 PF00593 TonB dependent receptor JHW28_RS12285 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS12300 PF03334 Na+/H+ antiporter subunit JHW28_RS12305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JHW28_RS12315 PF00361 Proton-conducting membrane transporter JHW28_RS12320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JHW28_RS12325 PF13244 Domain of unknown function (DUF4040) JHW28_RS12325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JHW28_RS12325 PF00361 Proton-conducting membrane transporter JHW28_RS12325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JHW28_RS12345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS12345 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS12345 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS12355 PF00296 Luciferase-like monooxygenase JHW28_RS12365 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS12365 PF00005 ABC transporter JHW28_RS12385 PF00005 ABC transporter JHW28_RS12395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS12395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS12400 PF00082 Subtilase family JHW28_RS12400 PF03797 Autotransporter beta-domain JHW28_RS12400 PF12951 Passenger-associated-transport-repeat JHW28_RS12415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS12415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS12420 PF00857 Isochorismatase family JHW28_RS12430 PF10531 SLBB domain JHW28_RS12430 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JHW28_RS12430 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JHW28_RS12435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JHW28_RS12435 PF00384 Molybdopterin oxidoreductase JHW28_RS12435 PF01568 Molydopterin dinucleotide binding domain JHW28_RS12435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHW28_RS12435 PF12838 4Fe-4S dicluster domain JHW28_RS12450 PF00765 Autoinducer synthase JHW28_RS12455 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS12455 PF03472 Autoinducer binding domain JHW28_RS12460 PF00561 alpha/beta hydrolase fold JHW28_RS12465 PF06434 Aconitate hydratase 2 N-terminus JHW28_RS12465 PF00330 Aconitase family (aconitate hydratase) JHW28_RS12465 PF11791 Aconitate B N-terminal domain JHW28_RS12475 PF00582 Universal stress protein family JHW28_RS12480 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JHW28_RS12485 PF00072 Response regulator receiver domain JHW28_RS12485 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS12490 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS12490 PF00672 HAMP domain JHW28_RS12505 PF04828 Glutathione-dependent formaldehyde-activating enzyme JHW28_RS12520 PF03466 LysR substrate binding domain JHW28_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS12530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS12530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS12530 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS12535 PF03972 MmgE/PrpD family JHW28_RS12540 PF02515 CoA-transferase family III JHW28_RS12545 PF03328 HpcH/HpaI aldolase/citrate lyase family JHW28_RS12565 PF03480 Bacterial extracellular solute-binding protein, family 7 JHW28_RS12570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JHW28_RS12575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHW28_RS12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS12580 PF03466 LysR substrate binding domain JHW28_RS12585 PF04371 Porphyromonas-type peptidyl-arginine deiminase JHW28_RS12590 PF13416 Bacterial extracellular solute-binding protein JHW28_RS12600 PF03358 NADPH-dependent FMN reductase JHW28_RS12630 PF00264 Common central domain of tyrosinase JHW28_RS12645 PF07690 Major Facilitator Superfamily JHW28_RS12650 PF03466 LysR substrate binding domain JHW28_RS12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS12655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHW28_RS12655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHW28_RS12655 PF00205 Thiamine pyrophosphate enzyme, central domain JHW28_RS12660 PF07690 Major Facilitator Superfamily JHW28_RS12665 PF08546 Ketopantoate reductase PanE/ApbA C terminal JHW28_RS12665 PF02558 Ketopantoate reductase PanE/ApbA JHW28_RS12670 PF00171 Aldehyde dehydrogenase family JHW28_RS12675 PF03573 outer membrane porin, OprD family JHW28_RS12690 PF00175 Oxidoreductase NAD-binding domain JHW28_RS12690 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS12695 PF00355 Rieske [2Fe-2S] domain JHW28_RS12700 PF03466 LysR substrate binding domain JHW28_RS12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS12710 PF14552 Tautomerase enzyme JHW28_RS12715 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JHW28_RS12720 PF01266 FAD dependent oxidoreductase JHW28_RS12740 PF01202 Shikimate kinase JHW28_RS12745 PF13407 Periplasmic binding protein domain JHW28_RS12755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS12755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS12760 PF00158 Sigma-54 interaction domain JHW28_RS12760 PF13426 PAS domain JHW28_RS12760 PF02954 Bacterial regulatory protein, Fis family JHW28_RS12765 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS12780 PF14759 Reductase C-terminal JHW28_RS12780 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS12810 PF00561 alpha/beta hydrolase fold JHW28_RS12815 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JHW28_RS12820 PF13086 AAA domain JHW28_RS12820 PF13087 AAA domain JHW28_RS12820 PF13195 Protein of unknown function (DUF4011) JHW28_RS12830 PF09278 MerR, DNA binding JHW28_RS12830 PF00376 MerR family regulatory protein JHW28_RS12835 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS12835 PF08338 Domain of unknown function (DUF1731) JHW28_RS12875 PF01740 STAS domain JHW28_RS12875 PF00916 Sulfate permease family JHW28_RS12895 PF01799 [2Fe-2S] binding domain JHW28_RS12895 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS12895 PF10518 TAT (twin-arginine translocation) pathway signal sequence JHW28_RS12900 PF03450 CO dehydrogenase flavoprotein C-terminal domain JHW28_RS12900 PF00941 FAD binding domain in molybdopterin dehydrogenase JHW28_RS12905 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS12905 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JHW28_RS12910 PF01810 LysE type translocator JHW28_RS12915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS12915 PF07689 KaiB domain JHW28_RS12915 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS12935 PF01810 LysE type translocator JHW28_RS12945 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS12945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS12950 PF11742 Protein of unknown function (DUF3302) JHW28_RS12955 PF04303 PrpF protein JHW28_RS12970 PF02834 LigT like Phosphoesterase JHW28_RS13010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS13010 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHW28_RS13015 PF07005 Sugar-binding N-terminal domain JHW28_RS13015 PF17042 Nucleotide-binding C-terminal domain JHW28_RS13020 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS13025 PF02447 GntP family permease JHW28_RS13030 PF01261 Xylose isomerase-like TIM barrel JHW28_RS13040 PF08220 DeoR-like helix-turn-helix domain JHW28_RS13040 PF00455 DeoR C terminal sensor domain JHW28_RS13100 PF06958 S-type Pyocin JHW28_RS13120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS13125 PF00106 short chain dehydrogenase JHW28_RS13130 PF00561 alpha/beta hydrolase fold JHW28_RS13130 PF00364 Biotin-requiring enzyme JHW28_RS13135 PF00698 Acyl transferase domain JHW28_RS13135 PF08659 KR domain JHW28_RS13135 PF16197 Ketoacyl-synthetase C-terminal extension JHW28_RS13135 PF14765 Polyketide synthase dehydratase JHW28_RS13135 PF00550 Phosphopantetheine attachment site JHW28_RS13135 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS13135 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS13135 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS13140 PF00563 EAL domain JHW28_RS13140 PF13426 PAS domain JHW28_RS13140 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS13145 PF00324 Amino acid permease JHW28_RS13150 PF01266 FAD dependent oxidoreductase JHW28_RS13155 PF07055 Enoyl reductase FAD binding domain JHW28_RS13155 PF12241 Trans-2-enoyl-CoA reductase catalytic region JHW28_RS13155 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JHW28_RS13170 PF00293 NUDIX domain JHW28_RS13180 PF05114 Protein of unknown function (DUF692) JHW28_RS13190 PF07681 DoxX JHW28_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS13200 PF00672 HAMP domain JHW28_RS13200 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS13205 PF00072 Response regulator receiver domain JHW28_RS13205 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS13220 PF00578 AhpC/TSA family JHW28_RS13220 PF02683 Cytochrome C biogenesis protein transmembrane region JHW28_RS13220 PF17991 Thioredoxin like C-terminal domain JHW28_RS13240 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS13255 PF02690 Na+/Pi-cotransporter JHW28_RS13265 PF00689 Cation transporting ATPase, C-terminus JHW28_RS13265 PF00690 Cation transporter/ATPase, N-terminus JHW28_RS13275 PF03738 Glutathionylspermidine synthase preATP-grasp JHW28_RS13285 PF03994 Domain of Unknown Function (DUF350) JHW28_RS13305 PF04012 PspA/IM30 family JHW28_RS13325 PF01810 LysE type translocator JHW28_RS13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS13340 PF03466 LysR substrate binding domain JHW28_RS13345 PF00106 short chain dehydrogenase JHW28_RS13350 PF01799 [2Fe-2S] binding domain JHW28_RS13350 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS13355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS13370 PF00005 ABC transporter JHW28_RS13370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS13375 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS13380 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS13385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS13390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS13395 PF01476 LysM domain JHW28_RS13395 PF01464 Transglycosylase SLT domain JHW28_RS13400 PF00753 Metallo-beta-lactamase superfamily JHW28_RS13400 PF16123 Hydroxyacylglutathione hydrolase C-terminus JHW28_RS13410 PF00075 RNase H JHW28_RS13415 PF03009 Glycerophosphoryl diester phosphodiesterase family JHW28_RS13425 PF00929 Exonuclease JHW28_RS13430 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JHW28_RS13430 PF01276 Orn/Lys/Arg decarboxylase, major domain JHW28_RS13430 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JHW28_RS13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS13440 PF03466 LysR substrate binding domain JHW28_RS13450 PF03358 NADPH-dependent FMN reductase JHW28_RS13455 PF01022 Bacterial regulatory protein, arsR family JHW28_RS13460 PF02040 Arsenical pump membrane protein JHW28_RS13470 PF01513 ATP-NAD kinase JHW28_RS13475 PF00149 Calcineurin-like phosphoesterase JHW28_RS13480 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JHW28_RS13480 PF01694 Rhomboid family JHW28_RS13485 PF07023 Protein of unknown function (DUF1315) JHW28_RS13495 PF11940 Domain of unknown function (DUF3458) Ig-like fold JHW28_RS13495 PF01433 Peptidase family M1 domain JHW28_RS13495 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JHW28_RS13500 PF01740 STAS domain JHW28_RS13500 PF00916 Sulfate permease family JHW28_RS13520 PF10282 Lactonase, 7-bladed beta-propeller JHW28_RS13550 PF12320 Type 5 capsule protein repressor C-terminal domain JHW28_RS13550 PF00149 Calcineurin-like phosphoesterase JHW28_RS13565 PF03466 LysR substrate binding domain JHW28_RS13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS13575 PF00753 Metallo-beta-lactamase superfamily JHW28_RS13605 PF01882 Protein of unknown function DUF58 JHW28_RS13610 PF17863 AAA lid domain JHW28_RS13610 PF07726 ATPase family associated with various cellular activities (AAA) JHW28_RS13615 PF00551 Formyl transferase JHW28_RS13615 PF02911 Formyl transferase, C-terminal domain JHW28_RS13620 PF00083 Sugar (and other) transporter JHW28_RS13620 PF07690 Major Facilitator Superfamily JHW28_RS13625 PF01266 FAD dependent oxidoreductase JHW28_RS13630 PF07729 FCD domain JHW28_RS13630 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS13640 PF05088 Bacterial NAD-glutamate dehydrogenase JHW28_RS13655 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS13655 PF00155 Aminotransferase class I and II JHW28_RS13660 PF02627 Carboxymuconolactone decarboxylase family JHW28_RS13685 PF11612 Type II secretion system (T2SS), protein J JHW28_RS13685 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS13690 PF12019 Type II transport protein GspH JHW28_RS13690 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS13700 PF02501 Type II secretion system (T2SS), protein I JHW28_RS13700 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS13705 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS13705 PF08334 Type II secretion system (T2SS), protein G JHW28_RS13710 PF03934 Type II secretion system (T2SS), protein K JHW28_RS13725 PF00263 Bacterial type II and III secretion system protein JHW28_RS13725 PF03958 Bacterial type II/III secretion system short domain JHW28_RS13730 PF00437 Type II/IV secretion system protein JHW28_RS13735 PF00482 Type II secretion system (T2SS), protein F JHW28_RS13740 PF12849 PBP superfamily domain JHW28_RS13785 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS13790 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS13815 PF00639 PPIC-type PPIASE domain JHW28_RS13825 PF00583 Acetyltransferase (GNAT) family JHW28_RS13830 PF01177 Asp/Glu/Hydantoin racemase JHW28_RS13835 PF14525 AraC-binding-like domain JHW28_RS13835 PF12833 Helix-turn-helix domain JHW28_RS13860 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS13865 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS13865 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS13880 PF11769 Protein of unknown function (DUF3313) JHW28_RS13890 PF08534 Redoxin JHW28_RS13895 PF13533 Biotin-lipoyl like JHW28_RS13900 PF00873 AcrB/AcrD/AcrF family JHW28_RS13905 PF00873 AcrB/AcrD/AcrF family JHW28_RS13910 PF02321 Outer membrane efflux protein JHW28_RS13915 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS13915 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS13915 PF00563 EAL domain JHW28_RS13935 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS13935 PF00155 Aminotransferase class I and II JHW28_RS13940 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JHW28_RS13940 PF13746 4Fe-4S dicluster domain JHW28_RS13940 PF12801 4Fe-4S binding domain JHW28_RS13950 PF02308 MgtC family JHW28_RS13960 PF00128 Alpha amylase, catalytic domain JHW28_RS13960 PF11896 Domain of unknown function (DUF3416) JHW28_RS13965 PF16657 Maltogenic Amylase, C-terminal domain JHW28_RS13965 PF00128 Alpha amylase, catalytic domain JHW28_RS13970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHW28_RS13970 PF02806 Alpha amylase, C-terminal all-beta domain JHW28_RS13970 PF00128 Alpha amylase, catalytic domain JHW28_RS13980 PF03372 Endonuclease/Exonuclease/phosphatase family JHW28_RS13990 PF00128 Alpha amylase, catalytic domain JHW28_RS13990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHW28_RS14000 PF00128 Alpha amylase, catalytic domain JHW28_RS14005 PF02446 4-alpha-glucanotransferase JHW28_RS14010 PF11941 Domain of unknown function (DUF3459) JHW28_RS14010 PF00128 Alpha amylase, catalytic domain JHW28_RS14010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHW28_RS14015 PF00534 Glycosyl transferases group 1 JHW28_RS14015 PF08323 Starch synthase catalytic domain JHW28_RS14020 PF01842 ACT domain JHW28_RS14020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS14020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS14025 PF00561 alpha/beta hydrolase fold JHW28_RS14030 PF09335 SNARE associated Golgi protein JHW28_RS14040 PF05425 Copper resistance protein D JHW28_RS14045 PF04234 CopC domain JHW28_RS14050 PF05275 Copper resistance protein B precursor (CopB) JHW28_RS14055 PF07732 Multicopper oxidase JHW28_RS14055 PF07731 Multicopper oxidase JHW28_RS14055 PF00394 Multicopper oxidase JHW28_RS14070 PF00248 Aldo/keto reductase family JHW28_RS14075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14075 PF03466 LysR substrate binding domain JHW28_RS14090 PF01804 Penicillin amidase JHW28_RS14100 PF02615 Malate/L-lactate dehydrogenase JHW28_RS14115 PF03466 LysR substrate binding domain JHW28_RS14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14120 PF00795 Carbon-nitrogen hydrolase JHW28_RS14150 PF13296 Putative type VI secretion system Rhs element Vgr JHW28_RS14150 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS14150 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JHW28_RS14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14155 PF03466 LysR substrate binding domain JHW28_RS14160 PF07690 Major Facilitator Superfamily JHW28_RS14165 PF00970 Oxidoreductase FAD-binding domain JHW28_RS14165 PF00175 Oxidoreductase NAD-binding domain JHW28_RS14165 PF00042 Globin JHW28_RS14170 PF03466 LysR substrate binding domain JHW28_RS14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14175 PF04960 Glutaminase JHW28_RS14185 PF00860 Permease family JHW28_RS14190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14190 PF03466 LysR substrate binding domain JHW28_RS14195 PF00491 Arginase family JHW28_RS14210 PF03969 AFG1-like ATPase JHW28_RS14220 PF00583 Acetyltransferase (GNAT) family JHW28_RS14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS14225 PF00672 HAMP domain JHW28_RS14225 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS14230 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS14230 PF00072 Response regulator receiver domain JHW28_RS14240 PF00593 TonB dependent receptor JHW28_RS14240 PF07660 Secretin and TonB N terminus short domain JHW28_RS14240 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS14245 PF00884 Sulfatase JHW28_RS14255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS14255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JHW28_RS14260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JHW28_RS14260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JHW28_RS14270 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JHW28_RS14275 PF00171 Aldehyde dehydrogenase family JHW28_RS14275 PF01575 MaoC like domain JHW28_RS14280 PF03573 outer membrane porin, OprD family JHW28_RS14285 PF00474 Sodium:solute symporter family JHW28_RS14290 PF04341 Protein of unknown function, DUF485 JHW28_RS14295 PF00970 Oxidoreductase FAD-binding domain JHW28_RS14295 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS14295 PF00175 Oxidoreductase NAD-binding domain JHW28_RS14300 PF01883 Iron-sulfur cluster assembly protein JHW28_RS14305 PF05138 Phenylacetic acid catabolic protein JHW28_RS14310 PF06243 Phenylacetic acid degradation B JHW28_RS14315 PF05138 Phenylacetic acid catabolic protein JHW28_RS14320 PF00501 AMP-binding enzyme JHW28_RS14320 PF14535 AMP-binding enzyme C-terminal domain JHW28_RS14325 PF00108 Thiolase, N-terminal domain JHW28_RS14325 PF02803 Thiolase, C-terminal domain JHW28_RS14330 PF03061 Thioesterase superfamily JHW28_RS14335 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JHW28_RS14335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS14335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS14340 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS14345 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS14350 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS14355 PF07848 PaaX-like protein JHW28_RS14355 PF08223 PaaX-like protein C-terminal domain JHW28_RS14360 PF00501 AMP-binding enzyme JHW28_RS14360 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS14360 PF00668 Condensation domain JHW28_RS14360 PF00550 Phosphopantetheine attachment site JHW28_RS14360 PF00975 Thioesterase domain JHW28_RS14365 PF01648 4'-phosphopantetheinyl transferase superfamily JHW28_RS14365 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JHW28_RS14375 PF02954 Bacterial regulatory protein, Fis family JHW28_RS14375 PF00158 Sigma-54 interaction domain JHW28_RS14375 PF00072 Response regulator receiver domain JHW28_RS14420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS14420 PF17200 Single Cache domain 2 JHW28_RS14420 PF00672 HAMP domain JHW28_RS14425 PF02673 Bacitracin resistance protein BacA JHW28_RS14440 PF03466 LysR substrate binding domain JHW28_RS14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14445 PF02525 Flavodoxin-like fold JHW28_RS14455 PF07690 Major Facilitator Superfamily JHW28_RS14460 PF00005 ABC transporter JHW28_RS14460 PF12848 ABC transporter JHW28_RS14470 PF04679 ATP dependent DNA ligase C terminal region JHW28_RS14470 PF01068 ATP dependent DNA ligase domain JHW28_RS14470 PF13298 DNA polymerase Ligase (LigD) JHW28_RS14475 PF02735 Ku70/Ku80 beta-barrel domain JHW28_RS14485 PF07995 Glucose / Sorbosone dehydrogenase JHW28_RS14495 PF18030 RimK PreATP-grasp domain JHW28_RS14495 PF08443 RimK-like ATP-grasp domain JHW28_RS14500 PF01544 CorA-like Mg2+ transporter protein JHW28_RS14505 PF00557 Metallopeptidase family M24 JHW28_RS14520 PF00585 C-terminal regulatory domain of Threonine dehydratase JHW28_RS14520 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS14525 PF03974 Ecotin JHW28_RS14575 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS14580 PF04794 YdjC-like protein JHW28_RS14605 PF01522 Polysaccharide deacetylase JHW28_RS14615 PF00535 Glycosyl transferase family 2 JHW28_RS14625 PF13579 Glycosyl transferase 4-like domain JHW28_RS14625 PF00534 Glycosyl transferases group 1 JHW28_RS14645 PF02397 Bacterial sugar transferase JHW28_RS14650 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS14655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JHW28_RS14655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JHW28_RS14655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JHW28_RS14660 PF03573 outer membrane porin, OprD family JHW28_RS14670 PF00294 pfkB family carbohydrate kinase JHW28_RS14675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHW28_RS14675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHW28_RS14680 PF08125 Mannitol dehydrogenase C-terminal domain JHW28_RS14680 PF01232 Mannitol dehydrogenase Rossmann domain JHW28_RS14685 PF00005 ABC transporter JHW28_RS14685 PF17912 MalK OB fold domain JHW28_RS14690 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS14695 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS14705 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS14705 PF00593 TonB dependent receptor JHW28_RS14710 PF12833 Helix-turn-helix domain JHW28_RS14715 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS14715 PF00501 AMP-binding enzyme JHW28_RS14720 PF00106 short chain dehydrogenase JHW28_RS14725 PF00108 Thiolase, N-terminal domain JHW28_RS14725 PF02803 Thiolase, C-terminal domain JHW28_RS14730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS14730 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS14730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS14735 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS14740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS14740 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS14740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS14745 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS14750 PF03466 LysR substrate binding domain JHW28_RS14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14760 PF07690 Major Facilitator Superfamily JHW28_RS14770 PF01522 Polysaccharide deacetylase JHW28_RS14785 PF00005 ABC transporter JHW28_RS14790 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS14795 PF14698 Argininosuccinate lyase C-terminal JHW28_RS14795 PF00206 Lyase JHW28_RS14800 PF03466 LysR substrate binding domain JHW28_RS14800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS14815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JHW28_RS14815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JHW28_RS14815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JHW28_RS14820 PF00893 Small Multidrug Resistance protein JHW28_RS14825 PF00892 EamA-like transporter family JHW28_RS14830 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JHW28_RS14835 PF01522 Polysaccharide deacetylase JHW28_RS14840 PF02911 Formyl transferase, C-terminal domain JHW28_RS14840 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS14840 PF00551 Formyl transferase JHW28_RS14845 PF00535 Glycosyl transferase family 2 JHW28_RS14850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS14865 PF00005 ABC transporter JHW28_RS14895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS14900 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS14910 PF00296 Luciferase-like monooxygenase JHW28_RS14915 PF00248 Aldo/keto reductase family JHW28_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS14920 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS14925 PF00005 ABC transporter JHW28_RS14925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS14940 PF07690 Major Facilitator Superfamily JHW28_RS14965 PF03976 Polyphosphate kinase 2 (PPK2) JHW28_RS14970 PF00916 Sulfate permease family JHW28_RS14970 PF01740 STAS domain JHW28_RS14980 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS14990 PF00582 Universal stress protein family JHW28_RS15000 PF00034 Cytochrome c JHW28_RS15000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS15005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS15010 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS15010 PF01799 [2Fe-2S] binding domain JHW28_RS15025 PF00106 short chain dehydrogenase JHW28_RS15080 PF00072 Response regulator receiver domain JHW28_RS15080 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS15090 PF01042 Endoribonuclease L-PSP JHW28_RS15105 PF01593 Flavin containing amine oxidoreductase JHW28_RS15110 PF00034 Cytochrome c JHW28_RS15125 PF01593 Flavin containing amine oxidoreductase JHW28_RS15130 PF01266 FAD dependent oxidoreductase JHW28_RS15135 PF00108 Thiolase, N-terminal domain JHW28_RS15135 PF02803 Thiolase, C-terminal domain JHW28_RS15140 PF00501 AMP-binding enzyme JHW28_RS15140 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS15150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS15150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS15150 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS15170 PF07044 Protein of unknown function (DUF1329) JHW28_RS15185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS15185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS15185 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS15200 PF02321 Outer membrane efflux protein JHW28_RS15205 PF00873 AcrB/AcrD/AcrF family JHW28_RS15210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS15210 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS15230 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS15230 PF12833 Helix-turn-helix domain JHW28_RS15245 PF03466 LysR substrate binding domain JHW28_RS15245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS15265 PF00550 Phosphopantetheine attachment site JHW28_RS15265 PF00975 Thioesterase domain JHW28_RS15265 PF00501 AMP-binding enzyme JHW28_RS15265 PF00668 Condensation domain JHW28_RS15265 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS15275 PF00009 Elongation factor Tu GTP binding domain JHW28_RS15275 PF03144 Elongation factor Tu domain 2 JHW28_RS15275 PF03764 Elongation factor G, domain IV JHW28_RS15275 PF00679 Elongation factor G C-terminus JHW28_RS15275 PF14492 Elongation Factor G, domain II JHW28_RS15280 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JHW28_RS15285 PF16655 PhoD-like phosphatase, N-terminal domain JHW28_RS15285 PF09423 PhoD-like phosphatase JHW28_RS15290 PF13302 Acetyltransferase (GNAT) domain JHW28_RS15295 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS15305 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS15305 PF00593 TonB dependent receptor JHW28_RS15310 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS15320 PF00732 GMC oxidoreductase JHW28_RS15320 PF05199 GMC oxidoreductase JHW28_RS15350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHW28_RS15350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHW28_RS15355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS15355 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS15360 PF00664 ABC transporter transmembrane region JHW28_RS15360 PF03412 Peptidase C39 family JHW28_RS15360 PF00005 ABC transporter JHW28_RS15375 PF00005 ABC transporter JHW28_RS15380 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS15385 PF00296 Luciferase-like monooxygenase JHW28_RS15390 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS15395 PF03466 LysR substrate binding domain JHW28_RS15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS15400 PF05995 Cysteine dioxygenase type I JHW28_RS15415 PF00296 Luciferase-like monooxygenase JHW28_RS15425 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS15425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS15425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS15430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS15435 PF00593 TonB dependent receptor JHW28_RS15435 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS15440 PF01593 Flavin containing amine oxidoreductase JHW28_RS15445 PF01042 Endoribonuclease L-PSP JHW28_RS15450 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS15450 PF00593 TonB dependent receptor JHW28_RS15465 PF04303 PrpF protein JHW28_RS15470 PF00694 Aconitase C-terminal domain JHW28_RS15470 PF00330 Aconitase family (aconitate hydratase) JHW28_RS15475 PF03600 Citrate transporter JHW28_RS15505 PF00571 CBS domain JHW28_RS15515 PF05139 Erythromycin esterase JHW28_RS15515 PF00156 Phosphoribosyl transferase domain JHW28_RS15530 PF01613 Flavin reductase like domain JHW28_RS15535 PF00999 Sodium/hydrogen exchanger family JHW28_RS15545 PF00355 Rieske [2Fe-2S] domain JHW28_RS15550 PF04820 Tryptophan halogenase JHW28_RS15555 PF08933 Domain of unknown function (DUF1864) JHW28_RS15560 PF04820 Tryptophan halogenase JHW28_RS15565 PF12794 Mechanosensitive ion channel inner membrane domain 1 JHW28_RS15565 PF12795 Mechanosensitive ion channel porin domain JHW28_RS15565 PF00924 Mechanosensitive ion channel JHW28_RS15570 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS15570 PF05230 MASE2 domain JHW28_RS15575 PF03466 LysR substrate binding domain JHW28_RS15575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS15580 PF00171 Aldehyde dehydrogenase family JHW28_RS15590 PF04239 Protein of unknown function (DUF421) JHW28_RS15600 PF18146 Damage-inducible protein CinA KH domain JHW28_RS15600 PF02464 Competence-damaged protein JHW28_RS15600 PF00994 Probable molybdopterin binding domain JHW28_RS15625 PF00999 Sodium/hydrogen exchanger family JHW28_RS15635 PF00072 Response regulator receiver domain JHW28_RS15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS15635 PF13188 PAS domain JHW28_RS15635 PF08448 PAS fold JHW28_RS15635 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS15650 PF14759 Reductase C-terminal JHW28_RS15650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS15665 PF01565 FAD binding domain JHW28_RS15665 PF13183 4Fe-4S dicluster domain JHW28_RS15665 PF02913 FAD linked oxidases, C-terminal domain JHW28_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS15670 PF03466 LysR substrate binding domain JHW28_RS15685 PF06958 S-type Pyocin JHW28_RS15705 PF03050 Transposase IS66 family JHW28_RS15705 PF13817 IS66 C-terminal element JHW28_RS15705 PF13007 Transposase C of IS166 homeodomain JHW28_RS15705 PF13005 zinc-finger binding domain of transposase IS66 JHW28_RS15710 PF01966 HD domain JHW28_RS15715 PF06155 Protein of unknown function (DUF971) JHW28_RS15715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JHW28_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS15725 PF03466 LysR substrate binding domain JHW28_RS15755 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHW28_RS15755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS15755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS15755 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS15755 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS15755 PF13806 Rieske-like [2Fe-2S] domain JHW28_RS15760 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHW28_RS15760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS15760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS15760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS15760 PF13806 Rieske-like [2Fe-2S] domain JHW28_RS15760 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS15765 PF03737 Aldolase/RraA JHW28_RS15775 PF00005 ABC transporter JHW28_RS15780 PF01032 FecCD transport family JHW28_RS15785 PF01032 FecCD transport family JHW28_RS15790 PF01497 Periplasmic binding protein JHW28_RS15795 PF04183 IucA / IucC family JHW28_RS15795 PF06276 Ferric iron reductase FhuF-like transporter JHW28_RS15800 PF03328 HpcH/HpaI aldolase/citrate lyase family JHW28_RS15805 PF06276 Ferric iron reductase FhuF-like transporter JHW28_RS15805 PF04183 IucA / IucC family JHW28_RS15810 PF07690 Major Facilitator Superfamily JHW28_RS15815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHW28_RS15815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHW28_RS15820 PF04183 IucA / IucC family JHW28_RS15820 PF06276 Ferric iron reductase FhuF-like transporter JHW28_RS15825 PF00202 Aminotransferase class-III JHW28_RS15830 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS15830 PF00593 TonB dependent receptor JHW28_RS15835 PF04773 FecR protein JHW28_RS15835 PF16220 Domain of unknown function (DUF4880) JHW28_RS15840 PF04542 Sigma-70 region 2 JHW28_RS15840 PF08281 Sigma-70, region 4 JHW28_RS15845 PF05506 Domain of unknown function (DUF756) JHW28_RS15845 PF04185 Phosphoesterase family JHW28_RS15860 PF00120 Glutamine synthetase, catalytic domain JHW28_RS15870 PF13416 Bacterial extracellular solute-binding protein JHW28_RS15875 PF01266 FAD dependent oxidoreductase JHW28_RS15880 PF00563 EAL domain JHW28_RS15880 PF05231 MASE1 JHW28_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS15895 PF07730 Histidine kinase JHW28_RS15895 PF05384 Sensor protein DegS JHW28_RS15900 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS15900 PF00072 Response regulator receiver domain JHW28_RS15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS15905 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS15905 PF09308 LuxQ, periplasmic JHW28_RS15905 PF00072 Response regulator receiver domain JHW28_RS15910 PF00072 Response regulator receiver domain JHW28_RS15920 PF03573 outer membrane porin, OprD family JHW28_RS15935 PF01037 Lrp/AsnC ligand binding domain JHW28_RS15945 PF00202 Aminotransferase class-III JHW28_RS15950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS15955 PF00180 Isocitrate/isopropylmalate dehydrogenase JHW28_RS15960 PF00171 Aldehyde dehydrogenase family JHW28_RS15965 PF01546 Peptidase family M20/M25/M40 JHW28_RS15965 PF07687 Peptidase dimerisation domain JHW28_RS15970 PF01266 FAD dependent oxidoreductase JHW28_RS15975 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS15975 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS15985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS15985 PF00005 ABC transporter JHW28_RS15990 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS15990 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS15995 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS16000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS16005 PF01266 FAD dependent oxidoreductase JHW28_RS16015 PF00171 Aldehyde dehydrogenase family JHW28_RS16040 PF05139 Erythromycin esterase JHW28_RS16040 PF00156 Phosphoribosyl transferase domain JHW28_RS16045 PF00582 Universal stress protein family JHW28_RS16050 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS16060 PF00005 ABC transporter JHW28_RS16075 PF02311 AraC-like ligand binding domain JHW28_RS16075 PF12833 Helix-turn-helix domain JHW28_RS16080 PF09084 NMT1/THI5 like JHW28_RS16090 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS16095 PF00005 ABC transporter JHW28_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS16115 PF03459 TOBE domain JHW28_RS16120 PF00248 Aldo/keto reductase family JHW28_RS16125 PF09456 RcsC Alpha-Beta-Loop (ABL) JHW28_RS16125 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16125 PF00072 Response regulator receiver domain JHW28_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16130 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS16130 PF00563 EAL domain JHW28_RS16130 PF13188 PAS domain JHW28_RS16130 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS16135 PF00072 Response regulator receiver domain JHW28_RS16135 PF09456 RcsC Alpha-Beta-Loop (ABL) JHW28_RS16135 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16140 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS16140 PF00072 Response regulator receiver domain JHW28_RS16155 PF00144 Beta-lactamase JHW28_RS16160 PF00271 Helicase conserved C-terminal domain JHW28_RS16160 PF00270 DEAD/DEAH box helicase JHW28_RS16165 PF08774 VRR-NUC domain JHW28_RS16165 PF18081 Fanconi anemia-associated nuclease SAP domain JHW28_RS16180 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JHW28_RS16185 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JHW28_RS16190 PF03797 Autotransporter beta-domain JHW28_RS16190 PF12951 Passenger-associated-transport-repeat JHW28_RS16190 PF00082 Subtilase family JHW28_RS16195 PF12951 Passenger-associated-transport-repeat JHW28_RS16195 PF00082 Subtilase family JHW28_RS16195 PF03797 Autotransporter beta-domain JHW28_RS16200 PF02321 Outer membrane efflux protein JHW28_RS16205 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS16210 PF00005 ABC transporter JHW28_RS16210 PF00664 ABC transporter transmembrane region JHW28_RS16215 PF02974 Protease inhibitor Inh JHW28_RS16220 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JHW28_RS16220 PF08548 Peptidase M10 serralysin C terminal JHW28_RS16220 PF00413 Matrixin JHW28_RS16225 PF03576 Peptidase family S58 JHW28_RS16230 PF00324 Amino acid permease JHW28_RS16235 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS16235 PF00072 Response regulator receiver domain JHW28_RS16240 PF02311 AraC-like ligand binding domain JHW28_RS16240 PF12833 Helix-turn-helix domain JHW28_RS16250 PF13520 Amino acid permease JHW28_RS16255 PF00171 Aldehyde dehydrogenase family JHW28_RS16260 PF00202 Aminotransferase class-III JHW28_RS16265 PF17874 MalT-like TPR region JHW28_RS16265 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS16270 PF10703 MoaF N-terminal domain JHW28_RS16270 PF17409 MoaF C-terminal domain JHW28_RS16275 PF00202 Aminotransferase class-III JHW28_RS16290 PF13416 Bacterial extracellular solute-binding protein JHW28_RS16300 PF01266 FAD dependent oxidoreductase JHW28_RS16315 PF13361 UvrD-like helicase C-terminal domain JHW28_RS16315 PF12462 DNA helicase IV / RNA helicase N terminal JHW28_RS16315 PF00580 UvrD/REP helicase N-terminal domain JHW28_RS16320 PF17954 Quercetinase C-terminal cupin domain JHW28_RS16320 PF02678 Pirin JHW28_RS16325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHW28_RS16325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHW28_RS16325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHW28_RS16325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHW28_RS16330 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS16330 PF16197 Ketoacyl-synthetase C-terminal extension JHW28_RS16330 PF00550 Phosphopantetheine attachment site JHW28_RS16330 PF14765 Polyketide synthase dehydratase JHW28_RS16330 PF00107 Zinc-binding dehydrogenase JHW28_RS16330 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS16330 PF00698 Acyl transferase domain JHW28_RS16330 PF08659 KR domain JHW28_RS16330 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS16355 PF01425 Amidase JHW28_RS16360 PF02979 Nitrile hydratase, alpha chain JHW28_RS16365 PF02211 Nitrile hydratase beta subunit JHW28_RS16370 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS16370 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHW28_RS16375 PF08447 PAS fold JHW28_RS16380 PF08946 Osmosensory transporter coiled coil JHW28_RS16380 PF00083 Sugar (and other) transporter JHW28_RS16385 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS16385 PF00501 AMP-binding enzyme JHW28_RS16395 PF00072 Response regulator receiver domain JHW28_RS16395 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS16400 PF00704 Glycosyl hydrolases family 18 JHW28_RS16405 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHW28_RS16405 PF18416 N-acetylglucosamine binding protein domain 2 JHW28_RS16410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS16410 PF03466 LysR substrate binding domain JHW28_RS16420 PF00202 Aminotransferase class-III JHW28_RS16425 PF00324 Amino acid permease JHW28_RS16430 PF00171 Aldehyde dehydrogenase family JHW28_RS16435 PF07687 Peptidase dimerisation domain JHW28_RS16435 PF01546 Peptidase family M20/M25/M40 JHW28_RS16445 PF01042 Endoribonuclease L-PSP JHW28_RS16455 PF00296 Luciferase-like monooxygenase JHW28_RS16465 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS16465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS16470 PF00873 AcrB/AcrD/AcrF family JHW28_RS16475 PF02321 Outer membrane efflux protein JHW28_RS16480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS16480 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS16500 PF00072 Response regulator receiver domain JHW28_RS16500 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS16505 PF00672 HAMP domain JHW28_RS16505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16505 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16505 PF01627 Hpt domain JHW28_RS16505 PF00072 Response regulator receiver domain JHW28_RS16510 PF01339 CheB methylesterase JHW28_RS16515 PF03705 CheR methyltransferase, all-alpha domain JHW28_RS16515 PF01739 CheR methyltransferase, SAM binding domain JHW28_RS16520 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16520 PF01627 Hpt domain JHW28_RS16520 PF00072 Response regulator receiver domain JHW28_RS16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16525 PF13188 PAS domain JHW28_RS16525 PF00072 Response regulator receiver domain JHW28_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16525 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16525 PF08448 PAS fold JHW28_RS16535 PF12833 Helix-turn-helix domain JHW28_RS16540 PF03239 Iron permease FTR1 family JHW28_RS16545 PF09375 Imelysin JHW28_RS16545 PF13473 Cupredoxin-like domain JHW28_RS16550 PF04261 Dyp-type peroxidase family JHW28_RS16555 PF13473 Cupredoxin-like domain JHW28_RS16555 PF09375 Imelysin JHW28_RS16565 PF13091 PLD-like domain JHW28_RS16580 PF00296 Luciferase-like monooxygenase JHW28_RS16585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS16590 PF01925 Sulfite exporter TauE/SafE JHW28_RS16595 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JHW28_RS16595 PF09297 NADH pyrophosphatase zinc ribbon domain JHW28_RS16595 PF00293 NUDIX domain JHW28_RS16600 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS16605 PF08241 Methyltransferase domain JHW28_RS16615 PF00857 Isochorismatase family JHW28_RS16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS16620 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS16620 PF00672 HAMP domain JHW28_RS16625 PF00072 Response regulator receiver domain JHW28_RS16625 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS16630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS16630 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS16635 PF00873 AcrB/AcrD/AcrF family JHW28_RS16645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS16645 PF12833 Helix-turn-helix domain JHW28_RS16660 PF07859 alpha/beta hydrolase fold JHW28_RS16665 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS16675 PF00294 pfkB family carbohydrate kinase JHW28_RS16680 PF07690 Major Facilitator Superfamily JHW28_RS16685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS16685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS16690 PF00155 Aminotransferase class I and II JHW28_RS16695 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS16695 PF00672 HAMP domain JHW28_RS16695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS16700 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JHW28_RS16700 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JHW28_RS16705 PF01613 Flavin reductase like domain JHW28_RS16710 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS16710 PF00072 Response regulator receiver domain JHW28_RS16725 PF00850 Histone deacetylase domain JHW28_RS16740 PF07690 Major Facilitator Superfamily JHW28_RS16745 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS16745 PF00107 Zinc-binding dehydrogenase JHW28_RS16755 PF05199 GMC oxidoreductase JHW28_RS16755 PF00732 GMC oxidoreductase JHW28_RS16775 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS16780 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS16785 PF00171 Aldehyde dehydrogenase family JHW28_RS16790 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JHW28_RS16800 PF07690 Major Facilitator Superfamily JHW28_RS16805 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS16810 PF03328 HpcH/HpaI aldolase/citrate lyase family JHW28_RS16815 PF02595 Glycerate kinase family JHW28_RS16820 PF13556 PucR C-terminal helix-turn-helix domain JHW28_RS16820 PF17853 GGDEF-like domain JHW28_RS16820 PF05651 Putative sugar diacid recognition JHW28_RS16825 PF07690 Major Facilitator Superfamily JHW28_RS16830 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS16830 PF00501 AMP-binding enzyme JHW28_RS16840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS16840 PF03466 LysR substrate binding domain JHW28_RS16845 PF00248 Aldo/keto reductase family JHW28_RS16855 PF01047 MarR family JHW28_RS16860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHW28_RS16865 PF00892 EamA-like transporter family JHW28_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS16870 PF03466 LysR substrate binding domain JHW28_RS16875 PF00563 EAL domain JHW28_RS16875 PF12792 CSS motif domain associated with EAL JHW28_RS16890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHW28_RS16895 PF13192 Thioredoxin domain JHW28_RS16895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS16900 PF00578 AhpC/TSA family JHW28_RS16900 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHW28_RS16915 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS16915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHW28_RS16920 PF00483 Nucleotidyl transferase JHW28_RS16940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS16945 PF00034 Cytochrome c JHW28_RS16965 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JHW28_RS16970 PF13532 2OG-Fe(II) oxygenase superfamily JHW28_RS16975 PF02805 Metal binding domain of Ada JHW28_RS16975 PF12833 Helix-turn-helix domain JHW28_RS16975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHW28_RS16975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JHW28_RS16985 PF00107 Zinc-binding dehydrogenase JHW28_RS16985 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS16990 PF03060 Nitronate monooxygenase JHW28_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS17005 PF03459 TOBE domain JHW28_RS17005 PF00005 ABC transporter JHW28_RS17015 PF12848 ABC transporter JHW28_RS17015 PF00005 ABC transporter JHW28_RS17025 PF01906 Putative heavy-metal-binding JHW28_RS17145 PF00182 Chitinase class I JHW28_RS17160 PF00107 Zinc-binding dehydrogenase JHW28_RS17160 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS17165 PF03466 LysR substrate binding domain JHW28_RS17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17170 PF03466 LysR substrate binding domain JHW28_RS17175 PF02525 Flavodoxin-like fold JHW28_RS17180 PF00106 short chain dehydrogenase JHW28_RS17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17190 PF03466 LysR substrate binding domain JHW28_RS17195 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS17220 PF00999 Sodium/hydrogen exchanger family JHW28_RS17225 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS17235 PF00069 Protein kinase domain JHW28_RS17250 PF00873 AcrB/AcrD/AcrF family JHW28_RS17255 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS17255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS17260 PF00376 MerR family regulatory protein JHW28_RS17260 PF09278 MerR, DNA binding JHW28_RS17275 PF00158 Sigma-54 interaction domain JHW28_RS17275 PF02954 Bacterial regulatory protein, Fis family JHW28_RS17280 PF04405 Domain of Unknown function (DUF542) JHW28_RS17280 PF01814 Hemerythrin HHE cation binding domain JHW28_RS17295 PF06969 HemN C-terminal domain JHW28_RS17295 PF04055 Radical SAM superfamily JHW28_RS17305 PF02597 ThiS family JHW28_RS17310 PF01967 MoaC family JHW28_RS17340 PF07660 Secretin and TonB N terminus short domain JHW28_RS17340 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS17340 PF00593 TonB dependent receptor JHW28_RS17345 PF04773 FecR protein JHW28_RS17345 PF16220 Domain of unknown function (DUF4880) JHW28_RS17350 PF04542 Sigma-70 region 2 JHW28_RS17350 PF08281 Sigma-70, region 4 JHW28_RS17355 PF07687 Peptidase dimerisation domain JHW28_RS17355 PF01546 Peptidase family M20/M25/M40 JHW28_RS17365 PF13458 Periplasmic binding protein JHW28_RS17370 PF00005 ABC transporter JHW28_RS17375 PF00005 ABC transporter JHW28_RS17375 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS17380 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS17380 PF11862 Domain of unknown function (DUF3382) JHW28_RS17385 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS17390 PF03466 LysR substrate binding domain JHW28_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17395 PF00296 Luciferase-like monooxygenase JHW28_RS17400 PF00593 TonB dependent receptor JHW28_RS17400 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS17405 PF03741 Integral membrane protein TerC family JHW28_RS17410 PF00657 GDSL-like Lipase/Acylhydrolase JHW28_RS17410 PF03797 Autotransporter beta-domain JHW28_RS17415 PF03466 LysR substrate binding domain JHW28_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17425 PF07690 Major Facilitator Superfamily JHW28_RS17430 PF00456 Transketolase, thiamine diphosphate binding domain JHW28_RS17435 PF02780 Transketolase, C-terminal domain JHW28_RS17435 PF02779 Transketolase, pyrimidine binding domain JHW28_RS17455 PF03466 LysR substrate binding domain JHW28_RS17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17465 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family JHW28_RS17490 PF03466 LysR substrate binding domain JHW28_RS17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17500 PF04209 homogentisate 1,2-dioxygenase JHW28_RS17515 PF00171 Aldehyde dehydrogenase family JHW28_RS17520 PF00743 Flavin-binding monooxygenase-like JHW28_RS17525 PF07859 alpha/beta hydrolase fold JHW28_RS17530 PF06719 AraC-type transcriptional regulator N-terminus JHW28_RS17530 PF12833 Helix-turn-helix domain JHW28_RS17535 PF00107 Zinc-binding dehydrogenase JHW28_RS17535 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS17540 PF07690 Major Facilitator Superfamily JHW28_RS17555 PF01638 HxlR-like helix-turn-helix JHW28_RS17580 PF12833 Helix-turn-helix domain JHW28_RS17580 PF01965 DJ-1/PfpI family JHW28_RS17585 PF00501 AMP-binding enzyme JHW28_RS17590 PF00171 Aldehyde dehydrogenase family JHW28_RS17595 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS17605 PF03573 outer membrane porin, OprD family JHW28_RS17610 PF07690 Major Facilitator Superfamily JHW28_RS17625 PF02687 FtsX-like permease family JHW28_RS17625 PF00005 ABC transporter JHW28_RS17625 PF12704 MacB-like periplasmic core domain JHW28_RS17630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS17635 PF00550 Phosphopantetheine attachment site JHW28_RS17635 PF00501 AMP-binding enzyme JHW28_RS17635 PF00668 Condensation domain JHW28_RS17635 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS17640 PF00975 Thioesterase domain JHW28_RS17640 PF00550 Phosphopantetheine attachment site JHW28_RS17640 PF00501 AMP-binding enzyme JHW28_RS17640 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS17640 PF00668 Condensation domain JHW28_RS17645 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS17645 PF00550 Phosphopantetheine attachment site JHW28_RS17645 PF00668 Condensation domain JHW28_RS17645 PF00501 AMP-binding enzyme JHW28_RS17655 PF02321 Outer membrane efflux protein JHW28_RS17690 PF00072 Response regulator receiver domain JHW28_RS17690 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS17695 PF02321 Outer membrane efflux protein JHW28_RS17705 PF00005 ABC transporter JHW28_RS17705 PF00664 ABC transporter transmembrane region JHW28_RS17725 PF01261 Xylose isomerase-like TIM barrel JHW28_RS17740 PF03781 Sulfatase-modifying factor enzyme 1 JHW28_RS17750 PF00005 ABC transporter JHW28_RS17755 PF00069 Protein kinase domain JHW28_RS17755 PF03793 PASTA domain JHW28_RS17770 PF06761 Intracellular multiplication and human macrophage-killing JHW28_RS17770 PF06744 Type VI secretion protein IcmF C-terminal JHW28_RS17770 PF14331 ImcF-related N-terminal domain JHW28_RS17775 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHW28_RS17775 PF00691 OmpA family JHW28_RS17780 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHW28_RS17795 PF06812 ImpA, N-terminal, type VI secretion system JHW28_RS17800 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JHW28_RS17805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHW28_RS17810 PF05638 Type VI secretion system effector, Hcp JHW28_RS17825 PF04965 Gene 25-like lysozyme JHW28_RS17830 PF05947 Type VI secretion system, TssF JHW28_RS17840 PF17871 AAA lid domain JHW28_RS17840 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS17840 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS17840 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS17845 PF06715 Gp5 C-terminal repeat (3 copies) JHW28_RS17845 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS17865 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 JHW28_RS17865 PF13665 Domain of unknown function (DUF4150) JHW28_RS17880 PF00561 alpha/beta hydrolase fold JHW28_RS17885 PF02311 AraC-like ligand binding domain JHW28_RS17885 PF12833 Helix-turn-helix domain JHW28_RS17890 PF13426 PAS domain JHW28_RS17890 PF13493 Domain of unknown function (DUF4118) JHW28_RS17890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS17890 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS17890 PF00989 PAS fold JHW28_RS17890 PF08447 PAS fold JHW28_RS17895 PF00072 Response regulator receiver domain JHW28_RS17895 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS17900 PF00072 Response regulator receiver domain JHW28_RS17900 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS17920 PF09411 Lipid A 3-O-deacylase (PagL) JHW28_RS17925 PF03466 LysR substrate binding domain JHW28_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17935 PF00857 Isochorismatase family JHW28_RS17940 PF07969 Amidohydrolase family JHW28_RS17955 PF03466 LysR substrate binding domain JHW28_RS17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS17960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JHW28_RS17960 PF00753 Metallo-beta-lactamase superfamily JHW28_RS17960 PF10996 Beta-Casp domain JHW28_RS17965 PF01965 DJ-1/PfpI family JHW28_RS17965 PF12833 Helix-turn-helix domain JHW28_RS17970 PF00561 alpha/beta hydrolase fold JHW28_RS17975 PF03358 NADPH-dependent FMN reductase JHW28_RS17980 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS17985 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS17990 PF01965 DJ-1/PfpI family JHW28_RS17995 PF17954 Quercetinase C-terminal cupin domain JHW28_RS17995 PF02678 Pirin JHW28_RS18005 PF09828 Chromate resistance exported protein JHW28_RS18020 PF00857 Isochorismatase family JHW28_RS18025 PF03573 outer membrane porin, OprD family JHW28_RS18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18035 PF03466 LysR substrate binding domain JHW28_RS18040 PF07690 Major Facilitator Superfamily JHW28_RS18045 PF00034 Cytochrome c JHW28_RS18045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS18045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS18050 PF01799 [2Fe-2S] binding domain JHW28_RS18050 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS18055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS18055 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS18055 PF00034 Cytochrome c JHW28_RS18060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS18065 PF00989 PAS fold JHW28_RS18065 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS18065 PF01627 Hpt domain JHW28_RS18065 PF00072 Response regulator receiver domain JHW28_RS18065 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS18065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS18070 PF00375 Sodium:dicarboxylate symporter family JHW28_RS18080 PF12833 Helix-turn-helix domain JHW28_RS18080 PF06719 AraC-type transcriptional regulator N-terminus JHW28_RS18085 PF00106 short chain dehydrogenase JHW28_RS18090 PF05368 NmrA-like family JHW28_RS18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18095 PF03466 LysR substrate binding domain JHW28_RS18105 PF02525 Flavodoxin-like fold JHW28_RS18110 PF01638 HxlR-like helix-turn-helix JHW28_RS18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18115 PF03466 LysR substrate binding domain JHW28_RS18130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18130 PF03466 LysR substrate binding domain JHW28_RS18140 PF00248 Aldo/keto reductase family JHW28_RS18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18150 PF03466 LysR substrate binding domain JHW28_RS18160 PF03600 Citrate transporter JHW28_RS18170 PF00682 HMGL-like JHW28_RS18175 PF02515 CoA-transferase family III JHW28_RS18180 PF07690 Major Facilitator Superfamily JHW28_RS18185 PF01614 Bacterial transcriptional regulator JHW28_RS18185 PF09339 IclR helix-turn-helix domain JHW28_RS18190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS18190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS18200 PF03573 outer membrane porin, OprD family JHW28_RS18210 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS18215 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18230 PF03466 LysR substrate binding domain JHW28_RS18235 PF08666 SAF domain JHW28_RS18235 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JHW28_RS18240 PF00171 Aldehyde dehydrogenase family JHW28_RS18245 PF07690 Major Facilitator Superfamily JHW28_RS18245 PF00083 Sugar (and other) transporter JHW28_RS18250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JHW28_RS18250 PF08501 Shikimate dehydrogenase substrate binding domain JHW28_RS18250 PF01488 Shikimate / quinate 5-dehydrogenase JHW28_RS18270 PF01066 CDP-alcohol phosphatidyltransferase JHW28_RS18285 PF08459 UvrC Helix-hairpin-helix N-terminal JHW28_RS18285 PF01541 GIY-YIG catalytic domain JHW28_RS18285 PF02151 UvrB/uvrC motif JHW28_RS18290 PF00072 Response regulator receiver domain JHW28_RS18290 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS18310 PF00795 Carbon-nitrogen hydrolase JHW28_RS18315 PF00793 DAHP synthetase I family JHW28_RS18320 PF05698 Bacterial trigger factor protein (TF) C-terminus JHW28_RS18325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS18335 PF12911 N-terminal TM domain of oligopeptide transport permease C JHW28_RS18335 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS18340 PF00005 ABC transporter JHW28_RS18340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHW28_RS18345 PF00158 Sigma-54 interaction domain JHW28_RS18345 PF13185 GAF domain JHW28_RS18345 PF02954 Bacterial regulatory protein, Fis family JHW28_RS18355 PF00106 short chain dehydrogenase JHW28_RS18360 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS18360 PF00501 AMP-binding enzyme JHW28_RS18365 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS18365 PF13188 PAS domain JHW28_RS18365 PF08448 PAS fold JHW28_RS18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS18365 PF00072 Response regulator receiver domain JHW28_RS18375 PF00294 pfkB family carbohydrate kinase JHW28_RS18410 PF03061 Thioesterase superfamily JHW28_RS18415 PF01645 Conserved region in glutamate synthase JHW28_RS18420 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JHW28_RS18435 PF13593 SBF-like CPA transporter family (DUF4137) JHW28_RS18450 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS18450 PF13185 GAF domain JHW28_RS18460 PF03471 Transporter associated domain JHW28_RS18460 PF03741 Integral membrane protein TerC family JHW28_RS18460 PF00571 CBS domain JHW28_RS18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18495 PF03466 LysR substrate binding domain JHW28_RS18505 PF07690 Major Facilitator Superfamily JHW28_RS18520 PF07728 AAA domain (dynein-related subfamily) JHW28_RS18520 PF17863 AAA lid domain JHW28_RS18520 PF13519 von Willebrand factor type A domain JHW28_RS18525 PF02514 CobN/Magnesium Chelatase JHW28_RS18530 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHW28_RS18530 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS18545 PF01890 Cobalamin synthesis G C-terminus JHW28_RS18550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS18555 PF01106 NifU-like domain JHW28_RS18555 PF01521 Iron-sulphur cluster biosynthesis JHW28_RS18565 PF02310 B12 binding domain JHW28_RS18565 PF02607 B12 binding domain JHW28_RS18565 PF02965 Vitamin B12 dependent methionine synthase, activation domain JHW28_RS18565 PF00809 Pterin binding enzyme JHW28_RS18565 PF02574 Homocysteine S-methyltransferase JHW28_RS18575 PF13407 Periplasmic binding protein domain JHW28_RS18580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHW28_RS18580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHW28_RS18590 PF01343 Peptidase family S49 JHW28_RS18590 PF08496 Peptidase family S49 N-terminal JHW28_RS18605 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS18605 PF00551 Formyl transferase JHW28_RS18605 PF02911 Formyl transferase, C-terminal domain JHW28_RS18635 PF04343 Protein of unknown function, DUF488 JHW28_RS18640 PF07729 FCD domain JHW28_RS18640 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS18650 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS18660 PF00005 ABC transporter JHW28_RS18660 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHW28_RS18665 PF00005 ABC transporter JHW28_RS18670 PF01546 Peptidase family M20/M25/M40 JHW28_RS18670 PF07687 Peptidase dimerisation domain JHW28_RS18675 PF01425 Amidase JHW28_RS18680 PF01323 DSBA-like thioredoxin domain JHW28_RS18685 PF03466 LysR substrate binding domain JHW28_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18710 PF17755 UvrA DNA-binding domain JHW28_RS18715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS18715 PF13426 PAS domain JHW28_RS18715 PF00072 Response regulator receiver domain JHW28_RS18720 PF02811 PHP domain JHW28_RS18720 PF14579 Helix-hairpin-helix motif JHW28_RS18720 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHW28_RS18720 PF01336 OB-fold nucleic acid binding domain JHW28_RS18720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHW28_RS18735 PF00717 Peptidase S24-like JHW28_RS18735 PF01726 LexA DNA binding domain JHW28_RS18740 PF03466 LysR substrate binding domain JHW28_RS18740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18745 PF07969 Amidohydrolase family JHW28_RS18755 PF00884 Sulfatase JHW28_RS18755 PF08019 Phosphoethanolamine transferase EptA/EptB JHW28_RS18760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS18760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS18770 PF12833 Helix-turn-helix domain JHW28_RS18770 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS18785 PF04030 D-arabinono-1,4-lactone oxidase JHW28_RS18785 PF01565 FAD binding domain JHW28_RS18795 PF00171 Aldehyde dehydrogenase family JHW28_RS18805 PF03453 MoeA N-terminal region (domain I and II) JHW28_RS18805 PF03454 MoeA C-terminal region (domain IV) JHW28_RS18805 PF00994 Probable molybdopterin binding domain JHW28_RS18810 PF00994 Probable molybdopterin binding domain JHW28_RS18815 PF12804 MobA-like NTP transferase domain JHW28_RS18820 PF03466 LysR substrate binding domain JHW28_RS18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS18825 PF02391 MoaE protein JHW28_RS18835 PF01967 MoaC family JHW28_RS18840 PF01062 Bestrophin, RFP-TM, chloride channel JHW28_RS18845 PF04055 Radical SAM superfamily JHW28_RS18845 PF06463 Molybdenum Cofactor Synthesis C JHW28_RS18850 PF00384 Molybdopterin oxidoreductase JHW28_RS18850 PF01568 Molydopterin dinucleotide binding domain JHW28_RS18855 PF01654 Cytochrome bd terminal oxidase subunit I JHW28_RS18860 PF02322 Cytochrome bd terminal oxidase subunit II JHW28_RS18880 PF00384 Molybdopterin oxidoreductase JHW28_RS18885 PF00892 EamA-like transporter family JHW28_RS18890 PF01037 Lrp/AsnC ligand binding domain JHW28_RS18900 PF01027 Inhibitor of apoptosis-promoting Bax1 JHW28_RS18945 PF01471 Putative peptidoglycan binding domain JHW28_RS18945 PF03734 L,D-transpeptidase catalytic domain JHW28_RS18955 PF02954 Bacterial regulatory protein, Fis family JHW28_RS18955 PF00072 Response regulator receiver domain JHW28_RS18955 PF00158 Sigma-54 interaction domain JHW28_RS18960 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS18960 PF13188 PAS domain JHW28_RS18960 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS18960 PF00563 EAL domain JHW28_RS18965 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS18965 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS18965 PF00563 EAL domain JHW28_RS18970 PF00034 Cytochrome c JHW28_RS18970 PF03150 Di-haem cytochrome c peroxidase JHW28_RS18970 PF14376 Haem-binding domain JHW28_RS18975 PF08447 PAS fold JHW28_RS18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS18975 PF08448 PAS fold JHW28_RS18980 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS18980 PF13188 PAS domain JHW28_RS18980 PF08448 PAS fold JHW28_RS18980 PF00072 Response regulator receiver domain JHW28_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS18995 PF06039 Malate:quinone oxidoreductase (Mqo) JHW28_RS19020 PF06912 Protein of unknown function (DUF1275) JHW28_RS19025 PF02635 DsrE/DsrF-like family JHW28_RS19030 PF02635 DsrE/DsrF-like family JHW28_RS19040 PF04358 DsrC like protein JHW28_RS19045 PF00591 Glycosyl transferase family, a/b domain JHW28_RS19045 PF02885 Glycosyl transferase family, helical bundle domain JHW28_RS19050 PF13409 Glutathione S-transferase, N-terminal domain JHW28_RS19055 PF10414 Sirohaem synthase dimerisation region JHW28_RS19055 PF14824 Sirohaem biosynthesis protein central JHW28_RS19055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS19060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHW28_RS19060 PF02403 Seryl-tRNA synthetase N-terminal domain JHW28_RS19065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JHW28_RS19070 PF16193 AAA C-terminal domain JHW28_RS19070 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS19070 PF12002 MgsA AAA+ ATPase C terminal JHW28_RS19075 PF03548 Outer membrane lipoprotein carrier protein LolA JHW28_RS19080 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JHW28_RS19080 PF01580 FtsK/SpoIIIE family JHW28_RS19080 PF09397 Ftsk gamma domain JHW28_RS19080 PF17854 FtsK alpha domain JHW28_RS19085 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS19090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JHW28_RS19095 PF04377 Arginine-tRNA-protein transferase, C terminus JHW28_RS19095 PF04376 Arginine-tRNA-protein transferase, N terminus JHW28_RS19100 PF01176 Translation initiation factor 1A / IF-1 JHW28_RS19105 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS19105 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS19105 PF02861 Clp amino terminal domain, pathogenicity island component JHW28_RS19105 PF17871 AAA lid domain JHW28_RS19105 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS19110 PF02617 ATP-dependent Clp protease adaptor protein ClpS JHW28_RS19115 PF00313 'Cold-shock' DNA-binding domain JHW28_RS19120 PF00180 Isocitrate/isopropylmalate dehydrogenase JHW28_RS19125 PF03971 Monomeric isocitrate dehydrogenase JHW28_RS19130 PF00293 NUDIX domain JHW28_RS19140 PF04356 Protein of unknown function (DUF489) JHW28_RS19145 PF08328 Adenylosuccinate lyase C-terminal JHW28_RS19145 PF00206 Lyase JHW28_RS19150 PF08007 Cupin superfamily protein JHW28_RS19155 PF13673 Acetyltransferase (GNAT) domain JHW28_RS19165 PF00463 Isocitrate lyase family JHW28_RS19170 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JHW28_RS19175 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JHW28_RS19180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JHW28_RS19180 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JHW28_RS19190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JHW28_RS19190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JHW28_RS19195 PF00384 Molybdopterin oxidoreductase JHW28_RS19195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHW28_RS19195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JHW28_RS19200 PF00146 NADH dehydrogenase JHW28_RS19205 PF12838 4Fe-4S dicluster domain JHW28_RS19210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JHW28_RS19215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JHW28_RS19220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JHW28_RS19220 PF00361 Proton-conducting membrane transporter JHW28_RS19225 PF00361 Proton-conducting membrane transporter JHW28_RS19230 PF00361 Proton-conducting membrane transporter JHW28_RS19235 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system JHW28_RS19240 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA JHW28_RS19255 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS19260 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS19265 PF08402 TOBE domain JHW28_RS19265 PF00005 ABC transporter JHW28_RS19270 PF17912 MalK OB fold domain JHW28_RS19270 PF00005 ABC transporter JHW28_RS19275 PF01590 GAF domain JHW28_RS19275 PF00158 Sigma-54 interaction domain JHW28_RS19275 PF02954 Bacterial regulatory protein, Fis family JHW28_RS19280 PF09190 DALR domain JHW28_RS19280 PF01406 tRNA synthetases class I (C) catalytic domain JHW28_RS19285 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHW28_RS19285 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JHW28_RS19290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHW28_RS19295 PF12850 Calcineurin-like phosphoesterase superfamily domain JHW28_RS19300 PF07690 Major Facilitator Superfamily JHW28_RS19305 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS19305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS19310 PF02321 Outer membrane efflux protein JHW28_RS19315 PF01047 MarR family JHW28_RS19320 PF04357 TamB, inner membrane protein subunit of TAM complex JHW28_RS19325 PF17243 POTRA domain TamA domain 1 JHW28_RS19325 PF07244 Surface antigen variable number repeat JHW28_RS19325 PF01103 Surface antigen JHW28_RS19335 PF03372 Endonuclease/Exonuclease/phosphatase family JHW28_RS19345 PF00691 OmpA family JHW28_RS19350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS19350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS19350 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19355 PF03466 LysR substrate binding domain JHW28_RS19360 PF13411 MerR HTH family regulatory protein JHW28_RS19365 PF00682 HMGL-like JHW28_RS19370 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS19370 PF00501 AMP-binding enzyme JHW28_RS19375 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS19375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS19375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS19380 PF01039 Carboxyl transferase domain JHW28_RS19390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHW28_RS19390 PF00289 Biotin carboxylase, N-terminal domain JHW28_RS19390 PF02785 Biotin carboxylase C-terminal domain JHW28_RS19390 PF00364 Biotin-requiring enzyme JHW28_RS19395 PF00717 Peptidase S24-like JHW28_RS19405 PF18027 Cytosolic carboxypeptidase N-terminal domain JHW28_RS19405 PF00246 Zinc carboxypeptidase JHW28_RS19410 PF01638 HxlR-like helix-turn-helix JHW28_RS19415 PF07690 Major Facilitator Superfamily JHW28_RS19420 PF01292 Prokaryotic cytochrome b561 JHW28_RS19430 PF08281 Sigma-70, region 4 JHW28_RS19430 PF04542 Sigma-70 region 2 JHW28_RS19475 PF03969 AFG1-like ATPase JHW28_RS19485 PF01709 Transcriptional regulator JHW28_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19490 PF03466 LysR substrate binding domain JHW28_RS19495 PF00266 Aminotransferase class-V JHW28_RS19500 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS19505 PF01292 Prokaryotic cytochrome b561 JHW28_RS19515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS19515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS19520 PF00795 Carbon-nitrogen hydrolase JHW28_RS19525 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS19525 PF12833 Helix-turn-helix domain JHW28_RS19535 PF03466 LysR substrate binding domain JHW28_RS19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19540 PF07690 Major Facilitator Superfamily JHW28_RS19545 PF00639 PPIC-type PPIASE domain JHW28_RS19545 PF09312 SurA N-terminal domain JHW28_RS19550 PF00216 Bacterial DNA-binding protein JHW28_RS19555 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS19555 PF05362 Lon protease (S16) C-terminal proteolytic domain JHW28_RS19555 PF02190 ATP-dependent protease La (LON) substrate-binding domain JHW28_RS19560 PF06689 ClpX C4-type zinc finger JHW28_RS19560 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS19560 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS19565 PF00574 Clp protease JHW28_RS19570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS19570 PF05697 Bacterial trigger factor protein (TF) JHW28_RS19570 PF05698 Bacterial trigger factor protein (TF) C-terminus JHW28_RS19590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JHW28_RS19590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JHW28_RS19595 PF00768 D-alanyl-D-alanine carboxypeptidase JHW28_RS19610 PF03741 Integral membrane protein TerC family JHW28_RS19610 PF03471 Transporter associated domain JHW28_RS19620 PF03466 LysR substrate binding domain JHW28_RS19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19625 PF07690 Major Facilitator Superfamily JHW28_RS19630 PF00375 Sodium:dicarboxylate symporter family JHW28_RS19640 PF04337 Protein of unknown function, DUF480 JHW28_RS19650 PF08501 Shikimate dehydrogenase substrate binding domain JHW28_RS19670 PF01594 AI-2E family transporter JHW28_RS19675 PF01136 Peptidase family U32 JHW28_RS19675 PF16325 Peptidase family U32 C-terminal domain JHW28_RS19680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS19680 PF17200 Single Cache domain 2 JHW28_RS19680 PF00672 HAMP domain JHW28_RS19685 PF13726 Na+-H+ antiporter family JHW28_RS19685 PF03553 Na+/H+ antiporter family JHW28_RS19690 PF00672 HAMP domain JHW28_RS19690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS19695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS19700 PF00072 Response regulator receiver domain JHW28_RS19700 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS19720 PF01242 6-pyruvoyl tetrahydropterin synthase JHW28_RS19730 PF00561 alpha/beta hydrolase fold JHW28_RS19755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS19760 PF07969 Amidohydrolase family JHW28_RS19765 PF01678 Diaminopimelate epimerase JHW28_RS19770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JHW28_RS19770 PF13378 Enolase C-terminal domain-like JHW28_RS19775 PF07690 Major Facilitator Superfamily JHW28_RS19780 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS19785 PF02311 AraC-like ligand binding domain JHW28_RS19785 PF12833 Helix-turn-helix domain JHW28_RS19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19795 PF03466 LysR substrate binding domain JHW28_RS19805 PF01037 Lrp/AsnC ligand binding domain JHW28_RS19810 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS19815 PF07690 Major Facilitator Superfamily JHW28_RS19820 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS19820 PF07660 Secretin and TonB N terminus short domain JHW28_RS19820 PF00593 TonB dependent receptor JHW28_RS19830 PF04542 Sigma-70 region 2 JHW28_RS19830 PF08281 Sigma-70, region 4 JHW28_RS19840 PF15526 Novel toxin 21 JHW28_RS19840 PF13332 Hemagglutinin repeat JHW28_RS19840 PF05860 haemagglutination activity domain JHW28_RS19840 PF05594 Haemagluttinin repeat JHW28_RS19840 PF04829 Pre-toxin domain with VENN motif JHW28_RS19845 PF08479 POTRA domain, ShlB-type JHW28_RS19845 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JHW28_RS19845 PF17287 POTRA domain JHW28_RS19850 PF00082 Subtilase family JHW28_RS19875 PF03412 Peptidase C39 family JHW28_RS19875 PF00664 ABC transporter transmembrane region JHW28_RS19875 PF00005 ABC transporter JHW28_RS19880 PF02321 Outer membrane efflux protein JHW28_RS19885 PF01799 [2Fe-2S] binding domain JHW28_RS19885 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS19890 PF00034 Cytochrome c JHW28_RS19890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS19890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS19895 PF00034 Cytochrome c JHW28_RS19895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JHW28_RS19895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS19900 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS19905 PF01320 Colicin immunity protein / pyocin immunity protein JHW28_RS19910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS19910 PF17200 Single Cache domain 2 JHW28_RS19910 PF00672 HAMP domain JHW28_RS19915 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS19920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS19920 PF03466 LysR substrate binding domain JHW28_RS19930 PF01223 DNA/RNA non-specific endonuclease JHW28_RS19970 PF07237 Protein of unknown function (DUF1428) JHW28_RS19985 PF03594 Benzoate membrane transport protein JHW28_RS19990 PF07690 Major Facilitator Superfamily JHW28_RS19995 PF00106 short chain dehydrogenase JHW28_RS20000 PF00970 Oxidoreductase FAD-binding domain JHW28_RS20000 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS20000 PF00175 Oxidoreductase NAD-binding domain JHW28_RS20005 PF00866 Ring hydroxylating beta subunit JHW28_RS20010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JHW28_RS20010 PF00355 Rieske [2Fe-2S] domain JHW28_RS20015 PF14525 AraC-binding-like domain JHW28_RS20015 PF12833 Helix-turn-helix domain JHW28_RS20020 PF04444 Catechol dioxygenase N terminus JHW28_RS20020 PF00775 Dioxygenase JHW28_RS20025 PF02426 Muconolactone delta-isomerase JHW28_RS20030 PF13378 Enolase C-terminal domain-like JHW28_RS20030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JHW28_RS20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20035 PF03466 LysR substrate binding domain JHW28_RS20040 PF03573 outer membrane porin, OprD family JHW28_RS20060 PF08000 Bacterial PH domain JHW28_RS20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20065 PF03466 LysR substrate binding domain JHW28_RS20070 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHW28_RS20110 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JHW28_RS20110 PF13296 Putative type VI secretion system Rhs element Vgr JHW28_RS20110 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS20115 PF00141 Peroxidase JHW28_RS20135 PF01627 Hpt domain JHW28_RS20135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS20135 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS20135 PF00072 Response regulator receiver domain JHW28_RS20140 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS20140 PF00072 Response regulator receiver domain JHW28_RS20155 PF01425 Amidase JHW28_RS20160 PF13091 PLD-like domain JHW28_RS20160 PF13396 Phospholipase_D-nuclease N-terminal JHW28_RS20170 PF02567 Phenazine biosynthesis-like protein JHW28_RS20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20180 PF03466 LysR substrate binding domain JHW28_RS20185 PF00144 Beta-lactamase JHW28_RS20190 PF02810 SEC-C motif JHW28_RS20190 PF03695 Uncharacterised protein family (UPF0149) JHW28_RS20195 PF01925 Sulfite exporter TauE/SafE JHW28_RS20210 PF13533 Biotin-lipoyl like JHW28_RS20215 PF07690 Major Facilitator Superfamily JHW28_RS20220 PF02627 Carboxymuconolactone decarboxylase family JHW28_RS20230 PF00857 Isochorismatase family JHW28_RS20235 PF00857 Isochorismatase family JHW28_RS20240 PF02678 Pirin JHW28_RS20240 PF05726 Pirin C-terminal cupin domain JHW28_RS20245 PF03466 LysR substrate binding domain JHW28_RS20245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20255 PF00248 Aldo/keto reductase family JHW28_RS20270 PF02308 MgtC family JHW28_RS20275 PF00690 Cation transporter/ATPase, N-terminus JHW28_RS20275 PF00689 Cation transporting ATPase, C-terminus JHW28_RS20280 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JHW28_RS20290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS20295 PF02687 FtsX-like permease family JHW28_RS20295 PF00005 ABC transporter JHW28_RS20295 PF12704 MacB-like periplasmic core domain JHW28_RS20300 PF02321 Outer membrane efflux protein JHW28_RS20330 PF00005 ABC transporter JHW28_RS20330 PF00664 ABC transporter transmembrane region JHW28_RS20335 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS20335 PF07660 Secretin and TonB N terminus short domain JHW28_RS20335 PF00593 TonB dependent receptor JHW28_RS20340 PF00501 AMP-binding enzyme JHW28_RS20340 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS20340 PF00668 Condensation domain JHW28_RS20340 PF00501 AMP-binding enzyme JHW28_RS20340 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS20340 PF00668 Condensation domain JHW28_RS20340 PF00550 Phosphopantetheine attachment site JHW28_RS20340 PF00550 Phosphopantetheine attachment site JHW28_RS20345 PF00668 Condensation domain JHW28_RS20345 PF00550 Phosphopantetheine attachment site JHW28_RS20345 PF00501 AMP-binding enzyme JHW28_RS20345 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS20355 PF00975 Thioesterase domain JHW28_RS20380 PF00723 Glycosyl hydrolases family 15 JHW28_RS20405 PF01965 DJ-1/PfpI family JHW28_RS20410 PF00550 Phosphopantetheine attachment site JHW28_RS20415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHW28_RS20415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHW28_RS20430 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase JHW28_RS20460 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit JHW28_RS20475 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS20485 PF08447 PAS fold JHW28_RS20485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS20500 PF00171 Aldehyde dehydrogenase family JHW28_RS20520 PF00005 ABC transporter JHW28_RS20520 PF00664 ABC transporter transmembrane region JHW28_RS20525 PF13426 PAS domain JHW28_RS20525 PF02954 Bacterial regulatory protein, Fis family JHW28_RS20525 PF00158 Sigma-54 interaction domain JHW28_RS20540 PF13505 Outer membrane protein beta-barrel domain JHW28_RS20545 PF05736 OprF membrane domain JHW28_RS20545 PF00691 OmpA family JHW28_RS20555 PF00194 Eukaryotic-type carbonic anhydrase JHW28_RS20565 PF00563 EAL domain JHW28_RS20565 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS20565 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS20570 PF16168 Adhesin of bacterial autotransporter system, probable stalk JHW28_RS20570 PF13018 Extended Signal Peptide of Type V secretion system JHW28_RS20570 PF03212 Pertactin JHW28_RS20570 PF03797 Autotransporter beta-domain JHW28_RS20585 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JHW28_RS20590 PF00577 Outer membrane usher protein JHW28_RS20590 PF13953 PapC C-terminal domain JHW28_RS20590 PF13954 PapC N-terminal domain JHW28_RS20600 PF00989 PAS fold JHW28_RS20600 PF01627 Hpt domain JHW28_RS20600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS20600 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS20600 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS20600 PF00072 Response regulator receiver domain JHW28_RS20605 PF00072 Response regulator receiver domain JHW28_RS20605 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS20610 PF13426 PAS domain JHW28_RS20610 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS20610 PF00563 EAL domain JHW28_RS20615 PF03466 LysR substrate binding domain JHW28_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20630 PF02599 Global regulator protein family JHW28_RS20650 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS20670 PF00850 Histone deacetylase domain JHW28_RS20675 PF01546 Peptidase family M20/M25/M40 JHW28_RS20675 PF07687 Peptidase dimerisation domain JHW28_RS20680 PF07690 Major Facilitator Superfamily JHW28_RS20680 PF00083 Sugar (and other) transporter JHW28_RS20685 PF03466 LysR substrate binding domain JHW28_RS20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS20695 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS20700 PF00083 Sugar (and other) transporter JHW28_RS20700 PF07690 Major Facilitator Superfamily JHW28_RS20705 PF03466 LysR substrate binding domain JHW28_RS20705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS20710 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS20710 PF03717 Penicillin-binding Protein dimerisation domain JHW28_RS20715 PF00296 Luciferase-like monooxygenase JHW28_RS20720 PF00107 Zinc-binding dehydrogenase JHW28_RS20720 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS20750 PF00892 EamA-like transporter family JHW28_RS20760 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS20770 PF01323 DSBA-like thioredoxin domain JHW28_RS20780 PF00266 Aminotransferase class-V JHW28_RS20790 PF03358 NADPH-dependent FMN reductase JHW28_RS20795 PF00296 Luciferase-like monooxygenase JHW28_RS20800 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS20800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS20805 PF00158 Sigma-54 interaction domain JHW28_RS20815 PF00376 MerR family regulatory protein JHW28_RS20815 PF09278 MerR, DNA binding JHW28_RS20850 PF00005 ABC transporter JHW28_RS20855 PF00950 ABC 3 transport family JHW28_RS20870 PF03621 MbtH-like protein JHW28_RS20875 PF00202 Aminotransferase class-III JHW28_RS20880 PF08521 Two-component sensor kinase N-terminal JHW28_RS20880 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS20885 PF00072 Response regulator receiver domain JHW28_RS20885 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS20890 PF02683 Cytochrome C biogenesis protein transmembrane region JHW28_RS20890 PF11412 Disulphide bond corrector protein DsbC JHW28_RS20895 PF00578 AhpC/TSA family JHW28_RS20900 PF13098 Thioredoxin-like domain JHW28_RS20920 PF12146 Serine aminopeptidase, S33 JHW28_RS20925 PF00550 Phosphopantetheine attachment site JHW28_RS20925 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS20925 PF00668 Condensation domain JHW28_RS20925 PF00501 AMP-binding enzyme JHW28_RS20925 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS20925 PF00668 Condensation domain JHW28_RS20925 PF00501 AMP-binding enzyme JHW28_RS20925 PF00550 Phosphopantetheine attachment site JHW28_RS20945 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS20945 PF17932 Tetracyclin repressor-like, C-terminal domain JHW28_RS20960 PF01039 Carboxyl transferase domain JHW28_RS20965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS20965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS20965 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS20970 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS20975 PF02785 Biotin carboxylase C-terminal domain JHW28_RS20975 PF00289 Biotin carboxylase, N-terminal domain JHW28_RS20975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHW28_RS20975 PF00364 Biotin-requiring enzyme JHW28_RS20985 PF06865 Pyrimidine/purine nucleoside phosphorylase JHW28_RS20990 PF03473 MOSC domain JHW28_RS20990 PF03476 MOSC N-terminal beta barrel domain JHW28_RS20990 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS21005 PF05231 MASE1 JHW28_RS21005 PF07730 Histidine kinase JHW28_RS21005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21010 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS21010 PF00072 Response regulator receiver domain JHW28_RS21015 PF00781 Diacylglycerol kinase catalytic domain JHW28_RS21025 PF03453 MoeA N-terminal region (domain I and II) JHW28_RS21025 PF03454 MoeA C-terminal region (domain IV) JHW28_RS21025 PF00994 Probable molybdopterin binding domain JHW28_RS21030 PF00994 Probable molybdopterin binding domain JHW28_RS21035 PF12804 MobA-like NTP transferase domain JHW28_RS21045 PF00849 RNA pseudouridylate synthase JHW28_RS21065 PF00999 Sodium/hydrogen exchanger family JHW28_RS21065 PF02080 TrkA-C domain JHW28_RS21065 PF02254 TrkA-N domain JHW28_RS21070 PF00909 Ammonium Transporter Family JHW28_RS21090 PF12792 CSS motif domain associated with EAL JHW28_RS21090 PF00563 EAL domain JHW28_RS21095 PF01966 HD domain JHW28_RS21100 PF08479 POTRA domain, ShlB-type JHW28_RS21100 PF17287 POTRA domain JHW28_RS21100 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JHW28_RS21105 PF13332 Hemagglutinin repeat JHW28_RS21105 PF05860 haemagglutination activity domain JHW28_RS21110 PF00072 Response regulator receiver domain JHW28_RS21110 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS21140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS21140 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS21145 PF00005 ABC transporter JHW28_RS21145 PF00664 ABC transporter transmembrane region JHW28_RS21145 PF03412 Peptidase C39 family JHW28_RS21150 PF02321 Outer membrane efflux protein JHW28_RS21205 PF13953 PapC C-terminal domain JHW28_RS21205 PF00577 Outer membrane usher protein JHW28_RS21205 PF13954 PapC N-terminal domain JHW28_RS21220 PF00484 Carbonic anhydrase JHW28_RS21225 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS21225 PF00072 Response regulator receiver domain JHW28_RS21230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21230 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS21230 PF00072 Response regulator receiver domain JHW28_RS21230 PF09456 RcsC Alpha-Beta-Loop (ABL) JHW28_RS21235 PF00563 EAL domain JHW28_RS21235 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS21235 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS21240 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS21240 PF00072 Response regulator receiver domain JHW28_RS21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21240 PF09456 RcsC Alpha-Beta-Loop (ABL) JHW28_RS21310 PF00072 Response regulator receiver domain JHW28_RS21310 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS21315 PF00989 PAS fold JHW28_RS21315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21315 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS21315 PF01627 Hpt domain JHW28_RS21315 PF00072 Response regulator receiver domain JHW28_RS21315 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS21320 PF01966 HD domain JHW28_RS21325 PF13185 GAF domain JHW28_RS21335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHW28_RS21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21335 PF00672 HAMP domain JHW28_RS21335 PF01627 Hpt domain JHW28_RS21335 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS21335 PF00072 Response regulator receiver domain JHW28_RS21340 PF01047 MarR family JHW28_RS21345 PF00255 Glutathione peroxidase JHW28_RS21350 PF01641 SelR domain JHW28_RS21355 PF00155 Aminotransferase class I and II JHW28_RS21360 PF01435 Peptidase family M48 JHW28_RS21365 PF05724 Thiopurine S-methyltransferase (TPMT) JHW28_RS21370 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JHW28_RS21375 PF03880 DbpA RNA binding domain JHW28_RS21375 PF00270 DEAD/DEAH box helicase JHW28_RS21375 PF00271 Helicase conserved C-terminal domain JHW28_RS21385 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS21395 PF01474 Class-II DAHP synthetase family JHW28_RS21400 PF06224 Winged helix DNA-binding domain JHW28_RS21410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS21410 PF03466 LysR substrate binding domain JHW28_RS21420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS21420 PF03466 LysR substrate binding domain JHW28_RS21425 PF01047 MarR family JHW28_RS21430 PF02566 OsmC-like protein JHW28_RS21435 PF07859 alpha/beta hydrolase fold JHW28_RS21440 PF08207 Elongation factor P (EF-P) KOW-like domain JHW28_RS21440 PF09285 Elongation factor P, C-terminal JHW28_RS21440 PF01132 Elongation factor P (EF-P) OB domain JHW28_RS21455 PF03449 Transcription elongation factor, N-terminal JHW28_RS21455 PF01272 Transcription elongation factor, GreA/GreB, C-term JHW28_RS21460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS21460 PF03466 LysR substrate binding domain JHW28_RS21475 PF02558 Ketopantoate reductase PanE/ApbA JHW28_RS21475 PF08546 Ketopantoate reductase PanE/ApbA C terminal JHW28_RS21490 PF00793 DAHP synthetase I family JHW28_RS21500 PF11839 Alanine-zipper, major outer membrane lipoprotein JHW28_RS21505 PF17969 L,D-transpeptidase C-terminal domain JHW28_RS21505 PF03734 L,D-transpeptidase catalytic domain JHW28_RS21515 PF13472 GDSL-like Lipase/Acylhydrolase family JHW28_RS21520 PF00005 ABC transporter JHW28_RS21530 PF01272 Transcription elongation factor, GreA/GreB, C-term JHW28_RS21530 PF03449 Transcription elongation factor, N-terminal JHW28_RS21545 PF00072 Response regulator receiver domain JHW28_RS21545 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS21555 PF07681 DoxX JHW28_RS21560 PF01464 Transglycosylase SLT domain JHW28_RS21560 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS21565 PF01026 TatD related DNase JHW28_RS21570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS21570 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS21570 PF00672 HAMP domain JHW28_RS21595 PF01734 Patatin-like phospholipase JHW28_RS21600 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS21600 PF00072 Response regulator receiver domain JHW28_RS21605 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS21605 PF02702 Osmosensitive K+ channel His kinase sensor domain JHW28_RS21605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS21605 PF13492 GAF domain JHW28_RS21605 PF13493 Domain of unknown function (DUF4118) JHW28_RS21610 PF02669 K+-transporting ATPase, c chain JHW28_RS21620 PF03814 Potassium-transporting ATPase A subunit JHW28_RS21655 PF00106 short chain dehydrogenase JHW28_RS21670 PF02719 Polysaccharide biosynthesis protein JHW28_RS21675 PF00953 Glycosyl transferase family 4 JHW28_RS21680 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS21685 PF00534 Glycosyl transferases group 1 JHW28_RS21685 PF13477 Glycosyl transferase 4-like JHW28_RS21690 PF00534 Glycosyl transferases group 1 JHW28_RS21690 PF13439 Glycosyltransferase Family 4 JHW28_RS21695 PF00535 Glycosyl transferase family 2 JHW28_RS21715 PF00216 Bacterial DNA-binding protein JHW28_RS21725 PF00575 S1 RNA binding domain JHW28_RS21730 PF02224 Cytidylate kinase JHW28_RS21735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHW28_RS21740 PF00155 Aminotransferase class I and II JHW28_RS21745 PF00800 Prephenate dehydratase JHW28_RS21745 PF01817 Chorismate mutase type II JHW28_RS21745 PF01842 ACT domain JHW28_RS21750 PF00266 Aminotransferase class-V JHW28_RS21755 PF00521 DNA gyrase/topoisomerase IV, subunit A JHW28_RS21755 PF03989 DNA gyrase C-terminal domain, beta-propeller JHW28_RS21760 PF01008 Initiation factor 2 subunit family JHW28_RS21765 PF01979 Amidohydrolase family JHW28_RS21775 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS21780 PF00106 short chain dehydrogenase JHW28_RS21785 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS21795 PF08448 PAS fold JHW28_RS21795 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS21795 PF00563 EAL domain JHW28_RS21800 PF00664 ABC transporter transmembrane region JHW28_RS21800 PF00005 ABC transporter JHW28_RS21810 PF17773 UPF0176 acylphosphatase like domain JHW28_RS21810 PF00581 Rhodanese-like domain JHW28_RS21815 PF01722 BolA-like protein JHW28_RS21825 PF00206 Lyase JHW28_RS21825 PF10415 Fumarase C C-terminus JHW28_RS21830 PF00892 EamA-like transporter family JHW28_RS21835 PF00108 Thiolase, N-terminal domain JHW28_RS21835 PF02803 Thiolase, C-terminal domain JHW28_RS21840 PF03976 Polyphosphate kinase 2 (PPK2) JHW28_RS21845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JHW28_RS21845 PF01266 FAD dependent oxidoreductase JHW28_RS21850 PF13537 Glutamine amidotransferase domain JHW28_RS21850 PF00733 Asparagine synthase JHW28_RS21855 PF08443 RimK-like ATP-grasp domain JHW28_RS21855 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS21855 PF08245 Mur ligase middle domain JHW28_RS21860 PF05343 M42 glutamyl aminopeptidase JHW28_RS21865 PF06794 Uncharacterised protein family (UPF0270) JHW28_RS21870 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JHW28_RS21875 PF00561 alpha/beta hydrolase fold JHW28_RS21875 PF00106 short chain dehydrogenase JHW28_RS21885 PF00884 Sulfatase JHW28_RS21900 PF12796 Ankyrin repeats (3 copies) JHW28_RS21900 PF00023 Ankyrin repeat JHW28_RS21905 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS21905 PF00501 AMP-binding enzyme JHW28_RS21915 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS21920 PF03079 ARD/ARD' family JHW28_RS21925 PF00596 Class II Aldolase and Adducin N-terminal domain JHW28_RS21930 PF12832 MFS_1 like family JHW28_RS21935 PF01264 Chorismate synthase JHW28_RS21940 PF13026 Protein of unknown function (DUF3887) JHW28_RS21940 PF12146 Serine aminopeptidase, S33 JHW28_RS21950 PF05175 Methyltransferase small domain JHW28_RS21965 PF01713 Smr domain JHW28_RS21970 PF01227 GTP cyclohydrolase I JHW28_RS21980 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS21985 PF00155 Aminotransferase class I and II JHW28_RS21995 PF00860 Permease family JHW28_RS22005 PF00576 HIUase/Transthyretin family JHW28_RS22015 PF01014 Uricase JHW28_RS22015 PF09349 OHCU decarboxylase JHW28_RS22020 PF03561 Allantoicase repeat JHW28_RS22025 PF04115 Ureidoglycolate lyase JHW28_RS22035 PF00860 Permease family JHW28_RS22050 PF02678 Pirin JHW28_RS22050 PF05726 Pirin C-terminal cupin domain JHW28_RS22060 PF03279 Bacterial lipid A biosynthesis acyltransferase JHW28_RS22065 PF03775 Septum formation inhibitor MinC, C-terminal domain JHW28_RS22065 PF05209 Septum formation inhibitor MinC, N-terminal domain JHW28_RS22070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHW28_RS22075 PF03776 Septum formation topological specificity factor MinE JHW28_RS22080 PF00849 RNA pseudouridylate synthase JHW28_RS22090 PF02127 Aminopeptidase I zinc metalloprotease (M18) JHW28_RS22100 PF00924 Mechanosensitive ion channel JHW28_RS22105 PF01546 Peptidase family M20/M25/M40 JHW28_RS22105 PF07687 Peptidase dimerisation domain JHW28_RS22110 PF07702 UTRA domain JHW28_RS22110 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS22135 PF08402 TOBE domain JHW28_RS22135 PF00005 ABC transporter JHW28_RS22145 PF00698 Acyl transferase domain JHW28_RS22145 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS22145 PF08659 KR domain JHW28_RS22145 PF14765 Polyketide synthase dehydratase JHW28_RS22145 PF00550 Phosphopantetheine attachment site JHW28_RS22150 PF11818 C-terminal domain of tail specific protease (DUF3340) JHW28_RS22150 PF17804 Tail specific protease N-terminal domain JHW28_RS22150 PF03572 Peptidase family S41 JHW28_RS22150 PF00595 PDZ domain JHW28_RS22155 PF17153 Periplasmic sensor domain, extracellular JHW28_RS22155 PF00563 EAL domain JHW28_RS22180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHW28_RS22180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS22215 PF04381 Putative exonuclease, RdgC JHW28_RS22220 PF01758 Sodium Bile acid symporter family JHW28_RS22225 PF00893 Small Multidrug Resistance protein JHW28_RS22230 PF07690 Major Facilitator Superfamily JHW28_RS22255 PF00989 PAS fold JHW28_RS22255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22255 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS22260 PF02646 RmuC family JHW28_RS22280 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHW28_RS22285 PF00255 Glutathione peroxidase JHW28_RS22300 PF02654 Cobalamin-5-phosphate synthase JHW28_RS22305 PF00300 Histidine phosphatase superfamily (branch 1) JHW28_RS22310 PF02277 Phosphoribosyltransferase JHW28_RS22315 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JHW28_RS22320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHW28_RS22320 PF07685 CobB/CobQ-like glutamine amidotransferase domain JHW28_RS22325 PF00155 Aminotransferase class I and II JHW28_RS22330 PF17113 Regulatory signalling modulator protein AmpE JHW28_RS22330 PF03186 CobD/Cbib protein JHW28_RS22335 PF00881 Nitroreductase family JHW28_RS22340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHW28_RS22340 PF07685 CobB/CobQ-like glutamine amidotransferase domain JHW28_RS22345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JHW28_RS22345 PF12557 Cob(I)alamin adenosyltransferase N terminal JHW28_RS22355 PF07995 Glucose / Sorbosone dehydrogenase JHW28_RS22360 PF01596 O-methyltransferase JHW28_RS22365 PF00877 NlpC/P60 family JHW28_RS22370 PF00877 NlpC/P60 family JHW28_RS22375 PF00308 Bacterial dnaA protein JHW28_RS22380 PF01594 AI-2E family transporter JHW28_RS22390 PF00586 AIR synthase related protein, N-terminal domain JHW28_RS22390 PF02769 AIR synthase related protein, C-terminal domain JHW28_RS22395 PF00551 Formyl transferase JHW28_RS22410 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JHW28_RS22415 PF03819 MazG nucleotide pyrophosphohydrolase domain JHW28_RS22420 PF04607 Region found in RelA / SpoT proteins JHW28_RS22420 PF02824 TGS domain JHW28_RS22420 PF13291 ACT domain JHW28_RS22425 PF01938 TRAM domain JHW28_RS22425 PF05958 tRNA (Uracil-5-)-methyltransferase JHW28_RS22430 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS22435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22435 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS22435 PF16750 Sensor domain of 2-component histidine kinase JHW28_RS22435 PF00672 HAMP domain JHW28_RS22440 PF00072 Response regulator receiver domain JHW28_RS22440 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS22445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHW28_RS22445 PF00072 Response regulator receiver domain JHW28_RS22445 PF00672 HAMP domain JHW28_RS22445 PF01627 Hpt domain JHW28_RS22445 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS22450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS22450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS22465 PF00578 AhpC/TSA family JHW28_RS22470 PF03960 ArsC family JHW28_RS22475 PF03358 NADPH-dependent FMN reductase JHW28_RS22485 PF03352 Methyladenine glycosylase JHW28_RS22490 PF01171 PP-loop family JHW28_RS22495 PF04893 Yip1 domain JHW28_RS22500 PF17283 SprT-like zinc ribbon domain JHW28_RS22500 PF10263 SprT-like family JHW28_RS22505 PF02515 CoA-transferase family III JHW28_RS22510 PF00375 Sodium:dicarboxylate symporter family JHW28_RS22520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22525 PF00072 Response regulator receiver domain JHW28_RS22525 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS22535 PF01738 Dienelactone hydrolase family JHW28_RS22545 PF00672 HAMP domain JHW28_RS22545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22545 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS22550 PF00072 Response regulator receiver domain JHW28_RS22550 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS22560 PF02867 Ribonucleotide reductase, barrel domain JHW28_RS22560 PF00317 Ribonucleotide reductase, all-alpha domain JHW28_RS22560 PF03477 ATP cone domain JHW28_RS22565 PF00460 Flagella basal body rod protein JHW28_RS22565 PF07559 Flagellar basal body protein FlaE JHW28_RS22565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHW28_RS22570 PF13860 FlgD Ig-like domain JHW28_RS22570 PF03963 Flagellar hook capping protein - N-terminal region JHW28_RS22570 PF13861 FlgD Tudor-like domain JHW28_RS22575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHW28_RS22575 PF00460 Flagella basal body rod protein JHW28_RS22580 PF00460 Flagella basal body rod protein JHW28_RS22585 PF03705 CheR methyltransferase, all-alpha domain JHW28_RS22585 PF01739 CheR methyltransferase, SAM binding domain JHW28_RS22590 PF01584 CheW-like domain JHW28_RS22590 PF00072 Response regulator receiver domain JHW28_RS22610 PF07317 Flagellar regulator YcgR JHW28_RS22610 PF07238 PilZ domain JHW28_RS22615 PF07690 Major Facilitator Superfamily JHW28_RS22620 PF00120 Glutamine synthetase, catalytic domain JHW28_RS22625 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS22625 PF07689 KaiB domain JHW28_RS22645 PF05523 WxcM-like, C-terminal JHW28_RS22650 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS22655 PF02911 Formyl transferase, C-terminal domain JHW28_RS22655 PF00551 Formyl transferase JHW28_RS22680 PF03869 Arc-like DNA binding domain JHW28_RS22685 PF00571 CBS domain JHW28_RS22685 PF03448 MgtE intracellular N domain JHW28_RS22685 PF01769 Divalent cation transporter JHW28_RS22705 PF02599 Global regulator protein family JHW28_RS22710 PF00696 Amino acid kinase family JHW28_RS22710 PF01842 ACT domain JHW28_RS22710 PF13840 ACT domain JHW28_RS22715 PF02272 DHHA1 domain JHW28_RS22715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHW28_RS22715 PF01411 tRNA synthetases class II (A) JHW28_RS22720 PF01212 Beta-eliminating lyase JHW28_RS22725 PF00885 6,7-dimethyl-8-ribityllumazine synthase JHW28_RS22730 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JHW28_RS22740 PF04996 Succinylarginine dihydrolase JHW28_RS22745 PF00171 Aldehyde dehydrogenase family JHW28_RS22750 PF04958 Arginine N-succinyltransferase beta subunit JHW28_RS22755 PF04958 Arginine N-succinyltransferase beta subunit JHW28_RS22760 PF00202 Aminotransferase class-III JHW28_RS22765 PF12833 Helix-turn-helix domain JHW28_RS22770 PF00005 ABC transporter JHW28_RS22780 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS22785 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS22790 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS22795 PF00501 AMP-binding enzyme JHW28_RS22795 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS22795 PF16177 Acetyl-coenzyme A synthetase N-terminus JHW28_RS22805 PF00268 Ribonucleotide reductase, small chain JHW28_RS22845 PF12706 Beta-lactamase superfamily domain JHW28_RS22850 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS22855 PF05230 MASE2 domain JHW28_RS22855 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS22860 PF13426 PAS domain JHW28_RS22860 PF08447 PAS fold JHW28_RS22860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS22875 PF00117 Glutamine amidotransferase class-I JHW28_RS22875 PF06418 CTP synthase N-terminus JHW28_RS22880 PF03992 Antibiotic biosynthesis monooxygenase JHW28_RS22890 PF03009 Glycerophosphoryl diester phosphodiesterase family JHW28_RS22910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS22910 PF00672 HAMP domain JHW28_RS22920 PF01384 Phosphate transporter family JHW28_RS22930 PF02470 MlaD protein JHW28_RS22935 PF04403 Paraquat-inducible protein A JHW28_RS22940 PF04403 Paraquat-inducible protein A JHW28_RS22955 PF03466 LysR substrate binding domain JHW28_RS22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS22960 PF04542 Sigma-70 region 2 JHW28_RS22960 PF08281 Sigma-70, region 4 JHW28_RS22970 PF03795 YCII-related domain JHW28_RS23015 PF00155 Aminotransferase class I and II JHW28_RS23020 PF02447 GntP family permease JHW28_RS23030 PF00356 Bacterial regulatory proteins, lacI family JHW28_RS23030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHW28_RS23035 PF03466 LysR substrate binding domain JHW28_RS23035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS23045 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS23050 PF00083 Sugar (and other) transporter JHW28_RS23060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS23060 PF03466 LysR substrate binding domain JHW28_RS23065 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS23065 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS23070 PF00221 Aromatic amino acid lyase JHW28_RS23075 PF02423 Ornithine cyclodeaminase/mu-crystallin family JHW28_RS23080 PF09084 NMT1/THI5 like JHW28_RS23090 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS23090 PF00593 TonB dependent receptor JHW28_RS23095 PF16220 Domain of unknown function (DUF4880) JHW28_RS23095 PF04773 FecR protein JHW28_RS23100 PF08281 Sigma-70, region 4 JHW28_RS23100 PF04542 Sigma-70 region 2 JHW28_RS23125 PF01327 Polypeptide deformylase JHW28_RS23130 PF03631 Virulence factor BrkB JHW28_RS23160 PF01614 Bacterial transcriptional regulator JHW28_RS23160 PF09339 IclR helix-turn-helix domain JHW28_RS23170 PF18089 DAPG hydrolase PhiG domain JHW28_RS23190 PF00501 AMP-binding enzyme JHW28_RS23190 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS23195 PF00501 AMP-binding enzyme JHW28_RS23195 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS23200 PF12146 Serine aminopeptidase, S33 JHW28_RS23205 PF01575 MaoC like domain JHW28_RS23210 PF13533 Biotin-lipoyl like JHW28_RS23230 PF12843 Putative quorum-sensing-regulated virulence factor JHW28_RS23235 PF00266 Aminotransferase class-V JHW28_RS23240 PF01081 KDPG and KHG aldolase JHW28_RS23245 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JHW28_RS23250 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JHW28_RS23250 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JHW28_RS23255 PF01418 Helix-turn-helix domain, rpiR family JHW28_RS23255 PF01380 SIS domain JHW28_RS23260 PF01263 Aldose 1-epimerase JHW28_RS23265 PF04966 Carbohydrate-selective porin, OprB family JHW28_RS23270 PF03459 TOBE domain JHW28_RS23270 PF00005 ABC transporter JHW28_RS23270 PF17912 MalK OB fold domain JHW28_RS23275 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS23280 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS23285 PF01547 Bacterial extracellular solute-binding protein JHW28_RS23295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS23295 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS23295 PF00672 HAMP domain JHW28_RS23300 PF00072 Response regulator receiver domain JHW28_RS23300 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS23305 PF02685 Glucokinase JHW28_RS23310 PF00920 Dehydratase family JHW28_RS23315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHW28_RS23315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHW28_RS23320 PF02142 MGS-like domain JHW28_RS23325 PF08281 Sigma-70, region 4 JHW28_RS23325 PF04542 Sigma-70 region 2 JHW28_RS23330 PF16220 Domain of unknown function (DUF4880) JHW28_RS23330 PF04773 FecR protein JHW28_RS23335 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS23335 PF00593 TonB dependent receptor JHW28_RS23340 PF01126 Heme oxygenase JHW28_RS23345 PF04304 Protein of unknown function (DUF454) JHW28_RS23350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS23350 PF00672 HAMP domain JHW28_RS23355 PF02515 CoA-transferase family III JHW28_RS23365 PF13520 Amino acid permease JHW28_RS23370 PF13520 Amino acid permease JHW28_RS23380 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHW28_RS23380 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHW28_RS23385 PF00696 Amino acid kinase family JHW28_RS23395 PF18024 Helix-turn-helix domain JHW28_RS23395 PF00158 Sigma-54 interaction domain JHW28_RS23400 PF01597 Glycine cleavage H-protein JHW28_RS23405 PF02347 Glycine cleavage system P-protein JHW28_RS23410 PF03315 Serine dehydratase beta chain JHW28_RS23410 PF03313 Serine dehydratase alpha chain JHW28_RS23415 PF01571 Aminomethyltransferase folate-binding domain JHW28_RS23415 PF08669 Glycine cleavage T-protein C-terminal barrel domain JHW28_RS23420 PF00313 'Cold-shock' DNA-binding domain JHW28_RS23430 PF02445 Quinolinate synthetase A protein JHW28_RS23435 PF13629 Pilus formation protein N terminal region JHW28_RS23435 PF00263 Bacterial type II and III secretion system protein JHW28_RS23435 PF04972 BON domain JHW28_RS23460 PF00437 Type II/IV secretion system protein JHW28_RS23520 PF01263 Aldose 1-epimerase JHW28_RS23525 PF02653 Branched-chain amino acid transport system / permease component JHW28_RS23530 PF00005 ABC transporter JHW28_RS23535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHW28_RS23545 PF00171 Aldehyde dehydrogenase family JHW28_RS23555 PF07690 Major Facilitator Superfamily JHW28_RS23560 PF00920 Dehydratase family JHW28_RS23565 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS23570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHW28_RS23590 PF03796 DnaB-like helicase C terminal domain JHW28_RS23590 PF00772 DnaB-like helicase N terminal domain JHW28_RS23600 PF04245 37-kD nucleoid-associated bacterial protein JHW28_RS23605 PF03869 Arc-like DNA binding domain JHW28_RS23655 PF01751 Toprim domain JHW28_RS23655 PF01396 Topoisomerase DNA binding C4 zinc finger JHW28_RS23655 PF01131 DNA topoisomerase JHW28_RS23660 PF00176 SNF2 family N-terminal domain JHW28_RS23660 PF00271 Helicase conserved C-terminal domain JHW28_RS23660 PF12419 SNF2 Helicase protein JHW28_RS23675 PF07655 Secretin N-terminal domain JHW28_RS23675 PF00263 Bacterial type II and III secretion system protein JHW28_RS23690 PF00437 Type II/IV secretion system protein JHW28_RS23705 PF00437 Type II/IV secretion system protein JHW28_RS23710 PF04917 Bacterial shufflon protein, N-terminal constant region JHW28_RS23785 PF13302 Acetyltransferase (GNAT) domain JHW28_RS23790 PF13676 TIR domain JHW28_RS23800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JHW28_RS23800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JHW28_RS23800 PF13288 DXP reductoisomerase C-terminal domain JHW28_RS23805 PF00293 NUDIX domain JHW28_RS23810 PF02779 Transketolase, pyrimidine binding domain JHW28_RS23810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JHW28_RS23810 PF02780 Transketolase, C-terminal domain JHW28_RS23815 PF02401 LytB protein JHW28_RS23820 PF04551 GcpE protein JHW28_RS23825 PF00348 Polyprenyl synthetase JHW28_RS23835 PF01494 FAD binding domain JHW28_RS24000 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH JHW28_RS24015 PF00589 Phage integrase family JHW28_RS24025 PF06508 Queuosine biosynthesis protein QueC JHW28_RS24030 PF04055 Radical SAM superfamily JHW28_RS24035 PF16331 TolA binding protein trimerisation JHW28_RS24035 PF13525 Outer membrane lipoprotein JHW28_RS24040 PF00691 OmpA family JHW28_RS24045 PF07676 WD40-like Beta Propeller Repeat JHW28_RS24045 PF04052 TolB amino-terminal domain JHW28_RS24055 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS24060 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS24065 PF03061 Thioesterase superfamily JHW28_RS24070 PF17864 RuvB AAA lid domain JHW28_RS24070 PF05491 RuvB C-terminal winged helix domain JHW28_RS24070 PF05496 Holliday junction DNA helicase RuvB P-loop domain JHW28_RS24075 PF01330 RuvA N terminal domain JHW28_RS24075 PF07499 RuvA, C-terminal domain JHW28_RS24080 PF02075 Crossover junction endodeoxyribonuclease RuvC JHW28_RS24085 PF01709 Transcriptional regulator JHW28_RS24090 PF02938 GAD domain JHW28_RS24090 PF01336 OB-fold nucleic acid binding domain JHW28_RS24090 PF00152 tRNA synthetases class II (D, K and N) JHW28_RS24100 PF00210 Ferritin-like domain JHW28_RS24105 PF00313 'Cold-shock' DNA-binding domain JHW28_RS24110 PF04102 SlyX JHW28_RS24120 PF03573 outer membrane porin, OprD family JHW28_RS24125 PF00924 Mechanosensitive ion channel JHW28_RS24125 PF05552 Conserved TM helix JHW28_RS24130 PF04461 Protein of unknown function (DUF520) JHW28_RS24135 PF02558 Ketopantoate reductase PanE/ApbA JHW28_RS24135 PF08546 Ketopantoate reductase PanE/ApbA C terminal JHW28_RS24140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS24140 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS24140 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS24145 PF01923 Cobalamin adenosyltransferase JHW28_RS24150 PF02581 Thiamine monophosphate synthase JHW28_RS24160 PF01960 ArgJ family JHW28_RS24165 PF02810 SEC-C motif JHW28_RS24165 PF01043 SecA preprotein cross-linking domain JHW28_RS24165 PF07516 SecA Wing and Scaffold domain JHW28_RS24165 PF07517 SecA DEAD-like domain JHW28_RS24175 PF05872 Bacterial protein of unknown function (DUF853) JHW28_RS24180 PF02743 Cache domain JHW28_RS24180 PF00672 HAMP domain JHW28_RS24180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS24185 PF13439 Glycosyltransferase Family 4 JHW28_RS24185 PF00534 Glycosyl transferases group 1 JHW28_RS24205 PF00551 Formyl transferase JHW28_RS24215 PF08411 Exonuclease C-terminal JHW28_RS24215 PF00929 Exonuclease JHW28_RS24240 PF07726 ATPase family associated with various cellular activities (AAA) JHW28_RS24240 PF17863 AAA lid domain JHW28_RS24260 PF02887 Pyruvate kinase, alpha/beta domain JHW28_RS24260 PF00224 Pyruvate kinase, barrel domain JHW28_RS24265 PF00378 Enoyl-CoA hydratase/isomerase JHW28_RS24270 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS24275 PF08448 PAS fold JHW28_RS24275 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS24280 PF05681 Fumarate hydratase (Fumerase) JHW28_RS24280 PF05683 Fumarase C-terminus JHW28_RS24285 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS24285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS24290 PF00072 Response regulator receiver domain JHW28_RS24290 PF00158 Sigma-54 interaction domain JHW28_RS24290 PF02954 Bacterial regulatory protein, Fis family JHW28_RS24295 PF00083 Sugar (and other) transporter JHW28_RS24325 PF12833 Helix-turn-helix domain JHW28_RS24325 PF06719 AraC-type transcriptional regulator N-terminus JHW28_RS24330 PF00171 Aldehyde dehydrogenase family JHW28_RS24335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHW28_RS24335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHW28_RS24335 PF00205 Thiamine pyrophosphate enzyme, central domain JHW28_RS24340 PF03466 LysR substrate binding domain JHW28_RS24340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS24345 PF13460 NAD(P)H-binding JHW28_RS24355 PF03466 LysR substrate binding domain JHW28_RS24355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS24365 PF02311 AraC-like ligand binding domain JHW28_RS24365 PF12833 Helix-turn-helix domain JHW28_RS24370 PF01494 FAD binding domain JHW28_RS24375 PF07690 Major Facilitator Superfamily JHW28_RS24390 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS24395 PF03466 LysR substrate binding domain JHW28_RS24395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS24405 PF01810 LysE type translocator JHW28_RS24410 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHW28_RS24410 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHW28_RS24415 PF00563 EAL domain JHW28_RS24415 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS24415 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS24440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS24445 PF00873 AcrB/AcrD/AcrF family JHW28_RS24465 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS24465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS24465 PF08521 Two-component sensor kinase N-terminal JHW28_RS24470 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS24470 PF00072 Response regulator receiver domain JHW28_RS24480 PF00118 TCP-1/cpn60 chaperonin family JHW28_RS24485 PF00166 Chaperonin 10 Kd subunit JHW28_RS24490 PF04186 FxsA cytoplasmic membrane protein JHW28_RS24505 PF10609 NUBPL iron-transfer P-loop NTPase JHW28_RS24510 PF01588 Putative tRNA binding domain JHW28_RS24510 PF09334 tRNA synthetases class I (M) JHW28_RS24515 PF02508 Rnf-Nqr subunit, membrane protein JHW28_RS24520 PF04060 Putative Fe-S cluster JHW28_RS24525 PF03116 NQR2, RnfD, RnfE family JHW28_RS24530 PF04205 FMN-binding domain JHW28_RS24535 PF02508 Rnf-Nqr subunit, membrane protein JHW28_RS24540 PF00730 HhH-GPD superfamily base excision DNA repair protein JHW28_RS24540 PF00633 Helix-hairpin-helix motif JHW28_RS24540 PF10576 Iron-sulfur binding domain of endonuclease III JHW28_RS24550 PF00072 Response regulator receiver domain JHW28_RS24550 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS24555 PF00764 Arginosuccinate synthase JHW28_RS24565 PF01979 Amidohydrolase family JHW28_RS24570 PF00929 Exonuclease JHW28_RS24575 PF00578 AhpC/TSA family JHW28_RS24575 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHW28_RS24580 PF04324 BFD-like [2Fe-2S] binding domain JHW28_RS24585 PF00210 Ferritin-like domain JHW28_RS24590 PF00462 Glutaredoxin JHW28_RS24595 PF01568 Molydopterin dinucleotide binding domain JHW28_RS24595 PF00384 Molybdopterin oxidoreductase JHW28_RS24595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHW28_RS24605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHW28_RS24605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHW28_RS24610 PF08402 TOBE domain JHW28_RS24610 PF00005 ABC transporter JHW28_RS24615 PF02567 Phenazine biosynthesis-like protein JHW28_RS24620 PF04073 Aminoacyl-tRNA editing domain JHW28_RS24625 PF00230 Major intrinsic protein JHW28_RS24630 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHW28_RS24630 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHW28_RS24635 PF00455 DeoR C terminal sensor domain JHW28_RS24635 PF08220 DeoR-like helix-turn-helix domain JHW28_RS24640 PF01266 FAD dependent oxidoreductase JHW28_RS24640 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JHW28_RS24645 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS24650 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS24655 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS24660 PF00005 ABC transporter JHW28_RS24665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS24665 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS24665 PF02743 Cache domain JHW28_RS24670 PF00158 Sigma-54 interaction domain JHW28_RS24670 PF00072 Response regulator receiver domain JHW28_RS24670 PF02954 Bacterial regulatory protein, Fis family JHW28_RS24675 PF06942 GlpM protein JHW28_RS24690 PF00892 EamA-like transporter family JHW28_RS24710 PF00202 Aminotransferase class-III JHW28_RS24725 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS24725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS24730 PF00072 Response regulator receiver domain JHW28_RS24730 PF02954 Bacterial regulatory protein, Fis family JHW28_RS24730 PF00158 Sigma-54 interaction domain JHW28_RS24735 PF00561 alpha/beta hydrolase fold JHW28_RS24740 PF01717 Cobalamin-independent synthase, Catalytic domain JHW28_RS24740 PF08267 Cobalamin-independent synthase, N-terminal domain JHW28_RS24745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS24745 PF03466 LysR substrate binding domain JHW28_RS24750 PF00583 Acetyltransferase (GNAT) family JHW28_RS24755 PF01810 LysE type translocator JHW28_RS24760 PF03099 Biotin/lipoate A/B protein ligase family JHW28_RS24760 PF00293 NUDIX domain JHW28_RS24765 PF01197 Ribosomal protein L31 JHW28_RS24775 PF01645 Conserved region in glutamate synthase JHW28_RS24795 PF00535 Glycosyl transferase family 2 JHW28_RS24800 PF04138 GtrA-like protein JHW28_RS24815 PF00324 Amino acid permease JHW28_RS24825 PF03551 Transcriptional regulator PadR-like family JHW28_RS24830 PF04954 Siderophore-interacting protein JHW28_RS24830 PF08021 Siderophore-interacting FAD-binding domain JHW28_RS24840 PF09905 DNA-binding protein VF530 JHW28_RS24845 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS24845 PF00593 TonB dependent receptor JHW28_RS24855 PF04966 Carbohydrate-selective porin, OprB family JHW28_RS24860 PF01011 PQQ enzyme repeat JHW28_RS24875 PF00563 EAL domain JHW28_RS24875 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS24875 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS24880 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS24880 PF02190 ATP-dependent protease La (LON) substrate-binding domain JHW28_RS24880 PF05362 Lon protease (S16) C-terminal proteolytic domain JHW28_RS24890 PF07947 YhhN family JHW28_RS24895 PF13649 Methyltransferase domain JHW28_RS24900 PF08003 Protein of unknown function (DUF1698) JHW28_RS24905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHW28_RS24910 PF00394 Multicopper oxidase JHW28_RS24910 PF07731 Multicopper oxidase JHW28_RS24910 PF07732 Multicopper oxidase JHW28_RS24920 PF05524 PEP-utilising enzyme, N-terminal JHW28_RS24920 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS24920 PF02896 PEP-utilising enzyme, TIM barrel domain JHW28_RS24920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHW28_RS24920 PF00381 PTS HPr component phosphorylation site JHW28_RS24925 PF02264 LamB porin JHW28_RS24930 PF00128 Alpha amylase, catalytic domain JHW28_RS24930 PF16657 Maltogenic Amylase, C-terminal domain JHW28_RS24935 PF00367 phosphotransferase system, EIIB JHW28_RS24935 PF02378 Phosphotransferase system, EIIC JHW28_RS24940 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS24940 PF07702 UTRA domain JHW28_RS24960 PF01494 FAD binding domain JHW28_RS24965 PF00958 GMP synthase C terminal domain JHW28_RS24965 PF02540 NAD synthase JHW28_RS24965 PF00117 Glutamine amidotransferase class-I JHW28_RS24970 PF00571 CBS domain JHW28_RS24970 PF00478 IMP dehydrogenase / GMP reductase domain JHW28_RS24985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS24985 PF03466 LysR substrate binding domain JHW28_RS24990 PF02601 Exonuclease VII, large subunit JHW28_RS24990 PF13742 OB-fold nucleic acid binding domain JHW28_RS24995 PF08525 Opacity-associated protein A N-terminal motif JHW28_RS24995 PF01551 Peptidase family M23 JHW28_RS24995 PF01476 LysM domain JHW28_RS25000 PF00682 HMGL-like JHW28_RS25000 PF08502 LeuA allosteric (dimerisation) domain JHW28_RS25010 PF00795 Carbon-nitrogen hydrolase JHW28_RS25015 PF00155 Aminotransferase class I and II JHW28_RS25020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JHW28_RS25020 PF01926 50S ribosome-binding GTPase JHW28_RS25025 PF13360 PQQ-like domain JHW28_RS25035 PF03129 Anticodon binding domain JHW28_RS25035 PF13393 Histidyl-tRNA synthetase JHW28_RS25040 PF04551 GcpE protein JHW28_RS25045 PF13464 Domain of unknown function (DUF4115) JHW28_RS25055 PF04055 Radical SAM superfamily JHW28_RS25060 PF00334 Nucleoside diphosphate kinase JHW28_RS25065 PF04384 Iron-sulphur cluster assembly JHW28_RS25070 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS25075 PF00012 Hsp70 protein JHW28_RS25080 PF00226 DnaJ domain JHW28_RS25080 PF07743 HSCB C-terminal oligomerisation domain JHW28_RS25085 PF01521 Iron-sulphur cluster biosynthesis JHW28_RS25090 PF01592 NifU-like N terminal domain JHW28_RS25095 PF00266 Aminotransferase class-V JHW28_RS25100 PF02082 Transcriptional regulator JHW28_RS25105 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS25105 PF06426 Serine acetyltransferase, N-terminal JHW28_RS25110 PF00588 SpoU rRNA Methylase family JHW28_RS25115 PF00459 Inositol monophosphatase family JHW28_RS25120 PF05433 Glycine zipper 2TM domain JHW28_RS25125 PF02355 Protein export membrane protein JHW28_RS25125 PF07549 SecD/SecF GG Motif JHW28_RS25130 PF13721 SecD export protein N-terminal TM region JHW28_RS25130 PF07549 SecD/SecF GG Motif JHW28_RS25130 PF02355 Protein export membrane protein JHW28_RS25135 PF02699 Preprotein translocase subunit JHW28_RS25140 PF01702 Queuine tRNA-ribosyltransferase JHW28_RS25145 PF02547 Queuosine biosynthesis protein JHW28_RS25155 PF03976 Polyphosphate kinase 2 (PPK2) JHW28_RS25160 PF00672 HAMP domain JHW28_RS25160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS25160 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS25165 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS25165 PF00072 Response regulator receiver domain JHW28_RS25170 PF04333 MlaA lipoprotein JHW28_RS25210 PF09335 SNARE associated Golgi protein JHW28_RS25215 PF00202 Aminotransferase class-III JHW28_RS25230 PF02435 Levansucrase/Invertase JHW28_RS25240 PF00743 Flavin-binding monooxygenase-like JHW28_RS25255 PF00970 Oxidoreductase FAD-binding domain JHW28_RS25255 PF00175 Oxidoreductase NAD-binding domain JHW28_RS25255 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS25265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS25270 PF00202 Aminotransferase class-III JHW28_RS25275 PF00550 Phosphopantetheine attachment site JHW28_RS25280 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS25280 PF03472 Autoinducer binding domain JHW28_RS25285 PF00501 AMP-binding enzyme JHW28_RS25290 PF01425 Amidase JHW28_RS25305 PF00464 Serine hydroxymethyltransferase JHW28_RS25320 PF06508 Queuosine biosynthesis protein QueC JHW28_RS25325 PF01040 UbiA prenyltransferase family JHW28_RS25330 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JHW28_RS25335 PF00510 Cytochrome c oxidase subunit III JHW28_RS25340 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHW28_RS25345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHW28_RS25345 PF06481 COX Aromatic Rich Motif JHW28_RS25355 PF02600 Disulfide bond formation protein DsbB JHW28_RS25365 PF00175 Oxidoreductase NAD-binding domain JHW28_RS25365 PF00042 Globin JHW28_RS25365 PF00970 Oxidoreductase FAD-binding domain JHW28_RS25370 PF02954 Bacterial regulatory protein, Fis family JHW28_RS25370 PF00158 Sigma-54 interaction domain JHW28_RS25375 PF01584 CheW-like domain JHW28_RS25375 PF00072 Response regulator receiver domain JHW28_RS25400 PF13533 Biotin-lipoyl like JHW28_RS25405 PF00873 AcrB/AcrD/AcrF family JHW28_RS25410 PF00072 Response regulator receiver domain JHW28_RS25410 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS25415 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS25415 PF00672 HAMP domain JHW28_RS25425 PF03573 outer membrane porin, OprD family JHW28_RS25430 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS25430 PF01590 GAF domain JHW28_RS25430 PF00563 EAL domain JHW28_RS25430 PF00360 Phytochrome region JHW28_RS25435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JHW28_RS25440 PF12327 FtsZ family, C-terminal domain JHW28_RS25440 PF00091 Tubulin/FtsZ family, GTPase domain JHW28_RS25445 PF02491 SHS2 domain inserted in FTSA JHW28_RS25450 PF08478 POTRA domain, FtsQ-type JHW28_RS25450 PF03799 Cell division protein FtsQ JHW28_RS25455 PF07478 D-ala D-ala ligase C-terminus JHW28_RS25455 PF01820 D-ala D-ala ligase N-terminus JHW28_RS25460 PF08245 Mur ligase middle domain JHW28_RS25460 PF01225 Mur ligase family, catalytic domain JHW28_RS25460 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS25465 PF04101 Glycosyltransferase family 28 C-terminal domain JHW28_RS25465 PF03033 Glycosyltransferase family 28 N-terminal domain JHW28_RS25470 PF01098 Cell cycle protein JHW28_RS25475 PF08245 Mur ligase middle domain JHW28_RS25475 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS25480 PF00953 Glycosyl transferase family 4 JHW28_RS25480 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JHW28_RS25485 PF08245 Mur ligase middle domain JHW28_RS25485 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS25485 PF01225 Mur ligase family, catalytic domain JHW28_RS25490 PF08245 Mur ligase middle domain JHW28_RS25490 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS25490 PF01225 Mur ligase family, catalytic domain JHW28_RS25495 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS25495 PF03717 Penicillin-binding Protein dimerisation domain JHW28_RS25500 PF04999 Cell division protein FtsL JHW28_RS25505 PF01795 MraW methylase family JHW28_RS25510 PF02381 MraZ protein, putative antitoxin-like JHW28_RS25520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHW28_RS25525 PF04348 LppC putative lipoprotein JHW28_RS25530 PF02021 Uncharacterised protein family UPF0102 JHW28_RS25535 PF13580 SIS domain JHW28_RS25540 PF04972 BON domain JHW28_RS25545 PF04386 Stringent starvation protein B JHW28_RS25550 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS25550 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS25555 PF02167 Cytochrome C1 family JHW28_RS25560 PF00032 Cytochrome b(C-terminal)/b6/petD JHW28_RS25560 PF00033 Cytochrome b/b6/petB JHW28_RS25565 PF00355 Rieske [2Fe-2S] domain JHW28_RS25565 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JHW28_RS25570 PF00380 Ribosomal protein S9/S16 JHW28_RS25575 PF00572 Ribosomal protein L13 JHW28_RS25580 PF00248 Aldo/keto reductase family JHW28_RS25585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS25585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS25585 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS25595 PF03969 AFG1-like ATPase JHW28_RS25600 PF00579 tRNA synthetases class I (W and Y) JHW28_RS25615 PF00691 OmpA family JHW28_RS25620 PF00753 Metallo-beta-lactamase superfamily JHW28_RS25630 PF01593 Flavin containing amine oxidoreductase JHW28_RS25635 PF00037 4Fe-4S binding domain JHW28_RS25635 PF11953 Domain of unknown function (DUF3470) JHW28_RS25675 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS25675 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS25680 PF00765 Autoinducer synthase JHW28_RS25685 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS25685 PF03472 Autoinducer binding domain JHW28_RS25690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JHW28_RS25690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHW28_RS25705 PF00072 Response regulator receiver domain JHW28_RS25705 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS25710 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS25710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS25710 PF08521 Two-component sensor kinase N-terminal JHW28_RS25715 PF17874 MalT-like TPR region JHW28_RS25715 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS25720 PF07044 Protein of unknown function (DUF1329) JHW28_RS25730 PF00501 AMP-binding enzyme JHW28_RS25730 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS25750 PF01810 LysE type translocator JHW28_RS25755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS25755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS25760 PF05175 Methyltransferase small domain JHW28_RS25760 PF08468 Methyltransferase small domain N-terminal JHW28_RS25765 PF01169 Uncharacterized protein family UPF0016 JHW28_RS25770 PF01435 Peptidase family M48 JHW28_RS25775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS25775 PF00672 HAMP domain JHW28_RS25780 PF02586 SOS response associated peptidase (SRAP) JHW28_RS25820 PF06039 Malate:quinone oxidoreductase (Mqo) JHW28_RS25840 PF00156 Phosphoribosyl transferase domain JHW28_RS25850 PF00860 Permease family JHW28_RS25855 PF00762 Ferrochelatase JHW28_RS25860 PF08338 Domain of unknown function (DUF1731) JHW28_RS25860 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS25865 PF01593 Flavin containing amine oxidoreductase JHW28_RS25875 PF13411 MerR HTH family regulatory protein JHW28_RS25880 PF03441 FAD binding domain of DNA photolyase JHW28_RS25880 PF00875 DNA photolyase JHW28_RS25890 PF09411 Lipid A 3-O-deacylase (PagL) JHW28_RS25895 PF01177 Asp/Glu/Hydantoin racemase JHW28_RS25900 PF00899 ThiF family JHW28_RS25905 PF17827 PrmC N-terminal domain JHW28_RS25905 PF05175 Methyltransferase small domain JHW28_RS25910 PF00472 RF-1 domain JHW28_RS25910 PF03462 PCRF domain JHW28_RS25915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JHW28_RS25915 PF01488 Shikimate / quinate 5-dehydrogenase JHW28_RS25915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JHW28_RS25925 PF03550 Outer membrane lipoprotein LolB JHW28_RS25930 PF08544 GHMP kinases C terminal JHW28_RS25930 PF00288 GHMP kinases N terminal domain JHW28_RS25940 PF14572 Phosphoribosyl synthetase-associated domain JHW28_RS25940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JHW28_RS25945 PF14693 Ribosomal protein TL5, C-terminal domain JHW28_RS25945 PF01386 Ribosomal L25p family JHW28_RS25950 PF01195 Peptidyl-tRNA hydrolase JHW28_RS25955 PF01926 50S ribosome-binding GTPase JHW28_RS25955 PF06071 Protein of unknown function (DUF933) JHW28_RS25965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS25965 PF03466 LysR substrate binding domain JHW28_RS25990 PF03475 3-alpha domain JHW28_RS25990 PF03473 MOSC domain JHW28_RS25995 PF07690 Major Facilitator Superfamily JHW28_RS26000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS26000 PF03466 LysR substrate binding domain JHW28_RS26005 PF08402 TOBE domain JHW28_RS26005 PF00005 ABC transporter JHW28_RS26010 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS26015 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS26020 PF13416 Bacterial extracellular solute-binding protein JHW28_RS26025 PF01425 Amidase JHW28_RS26035 PF00765 Autoinducer synthase JHW28_RS26040 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS26040 PF03472 Autoinducer binding domain JHW28_RS26045 PF03284 Phenazine biosynthesis protein A/B JHW28_RS26050 PF03284 Phenazine biosynthesis protein A/B JHW28_RS26055 PF01474 Class-II DAHP synthetase family JHW28_RS26060 PF00857 Isochorismatase family JHW28_RS26065 PF00425 chorismate binding enzyme JHW28_RS26065 PF00117 Glutamine amidotransferase class-I JHW28_RS26070 PF02567 Phenazine biosynthesis-like protein JHW28_RS26075 PF01243 Pyridoxamine 5'-phosphate oxidase JHW28_RS26075 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JHW28_RS26080 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JHW28_RS26080 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JHW28_RS26100 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system JHW28_RS26115 PF07739 TipAS antibiotic-recognition domain JHW28_RS26115 PF13411 MerR HTH family regulatory protein JHW28_RS26120 PF02578 Multi-copper polyphenol oxidoreductase laccase JHW28_RS26130 PF07478 D-ala D-ala ligase C-terminus JHW28_RS26130 PF01820 D-ala D-ala ligase N-terminus JHW28_RS26145 PF13443 Cro/C1-type HTH DNA-binding domain JHW28_RS26165 PF07883 Cupin domain JHW28_RS26170 PF07690 Major Facilitator Superfamily JHW28_RS26175 PF03466 LysR substrate binding domain JHW28_RS26175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS26180 PF01613 Flavin reductase like domain JHW28_RS26190 PF03466 LysR substrate binding domain JHW28_RS26190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS26195 PF08447 PAS fold JHW28_RS26195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS26195 PF13426 PAS domain JHW28_RS26200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS26200 PF08447 PAS fold JHW28_RS26200 PF13426 PAS domain JHW28_RS26215 PF03573 outer membrane porin, OprD family JHW28_RS26225 PF00873 AcrB/AcrD/AcrF family JHW28_RS26230 PF00529 HlyD membrane-fusion protein of T1SS JHW28_RS26230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHW28_RS26240 PF02321 Outer membrane efflux protein JHW28_RS26245 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS26245 PF00072 Response regulator receiver domain JHW28_RS26250 PF01545 Cation efflux family JHW28_RS26265 PF00083 Sugar (and other) transporter JHW28_RS26270 PF02548 Ketopantoate hydroxymethyltransferase JHW28_RS26285 PF02667 Short chain fatty acid transporter JHW28_RS26290 PF04185 Phosphoesterase family JHW28_RS26300 PF00484 Carbonic anhydrase JHW28_RS26310 PF00583 Acetyltransferase (GNAT) family JHW28_RS26335 PF02470 MlaD protein JHW28_RS26340 PF04403 Paraquat-inducible protein A JHW28_RS26345 PF04403 Paraquat-inducible protein A JHW28_RS26375 PF01794 Ferric reductase like transmembrane component JHW28_RS26380 PF00174 Oxidoreductase molybdopterin binding domain JHW28_RS26385 PF01066 CDP-alcohol phosphatidyltransferase JHW28_RS26390 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JHW28_RS26390 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JHW28_RS26395 PF10369 Small subunit of acetolactate synthase JHW28_RS26400 PF00205 Thiamine pyrophosphate enzyme, central domain JHW28_RS26400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHW28_RS26400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHW28_RS26410 PF04287 tRNA pseudouridine synthase C JHW28_RS26410 PF00849 RNA pseudouridylate synthase JHW28_RS26420 PF00912 Transglycosylase JHW28_RS26420 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS26420 PF14814 Bifunctional transglycosylase second domain JHW28_RS26440 PF00027 Cyclic nucleotide-binding domain JHW28_RS26450 PF00005 ABC transporter JHW28_RS26455 PF01032 FecCD transport family JHW28_RS26460 PF01497 Periplasmic binding protein JHW28_RS26470 PF03749 Sugar fermentation stimulation protein RE domain JHW28_RS26470 PF17746 SfsA N-terminal OB domain JHW28_RS26475 PF00155 Aminotransferase class I and II JHW28_RS26480 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHW28_RS26485 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHW28_RS26495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS26495 PF00989 PAS fold JHW28_RS26495 PF08447 PAS fold JHW28_RS26495 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS26500 PF00072 Response regulator receiver domain JHW28_RS26500 PF00158 Sigma-54 interaction domain JHW28_RS26500 PF02954 Bacterial regulatory protein, Fis family JHW28_RS26505 PF01743 Poly A polymerase head domain JHW28_RS26505 PF12627 Probable RNA and SrmB- binding site of polymerase A JHW28_RS26505 PF12626 Polymerase A arginine-rich C-terminus JHW28_RS26510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JHW28_RS26515 PF02548 Ketopantoate hydroxymethyltransferase JHW28_RS26520 PF02569 Pantoate-beta-alanine ligase JHW28_RS26525 PF02261 Aspartate decarboxylase JHW28_RS26530 PF00342 Phosphoglucose isomerase JHW28_RS26535 PF13193 AMP-binding enzyme C-terminal domain JHW28_RS26535 PF16177 Acetyl-coenzyme A synthetase N-terminus JHW28_RS26535 PF00501 AMP-binding enzyme JHW28_RS26545 PF00108 Thiolase, N-terminal domain JHW28_RS26545 PF02803 Thiolase, C-terminal domain JHW28_RS26550 PF17785 PUA-like domain JHW28_RS26550 PF10672 S-adenosylmethionine-dependent methyltransferase JHW28_RS26560 PF04972 BON domain JHW28_RS26565 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS26565 PF00114 Pilin (bacterial filament) JHW28_RS26570 PF00482 Type II secretion system (T2SS), protein F JHW28_RS26575 PF01478 Type IV leader peptidase family JHW28_RS26575 PF06750 Bacterial Peptidase A24 N-terminal domain JHW28_RS26580 PF01121 Dephospho-CoA kinase JHW28_RS26585 PF03884 DNA gyrase inhibitor YacG JHW28_RS26605 PF02397 Bacterial sugar transferase JHW28_RS26610 PF01050 Mannose-6-phosphate isomerase JHW28_RS26610 PF00483 Nucleotidyl transferase JHW28_RS26660 PF03023 Lipid II flippase MurJ JHW28_RS26675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS26685 PF13954 PapC N-terminal domain JHW28_RS26685 PF00577 Outer membrane usher protein JHW28_RS26685 PF13953 PapC C-terminal domain JHW28_RS26690 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JHW28_RS26690 PF02753 Pili assembly chaperone PapD, C-terminal domain JHW28_RS26700 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS26700 PF00072 Response regulator receiver domain JHW28_RS26710 PF13188 PAS domain JHW28_RS26710 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS26710 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS26710 PF00563 EAL domain JHW28_RS26745 PF02861 Clp amino terminal domain, pathogenicity island component JHW28_RS26745 PF17871 AAA lid domain JHW28_RS26745 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS26745 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS26745 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS26750 PF02578 Multi-copper polyphenol oxidoreductase laccase JHW28_RS26755 PF01479 S4 domain JHW28_RS26755 PF00849 RNA pseudouridylate synthase JHW28_RS26760 PF13525 Outer membrane lipoprotein JHW28_RS26770 PF00072 Response regulator receiver domain JHW28_RS26770 PF00158 Sigma-54 interaction domain JHW28_RS26770 PF02954 Bacterial regulatory protein, Fis family JHW28_RS26775 PF01266 FAD dependent oxidoreductase JHW28_RS26780 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JHW28_RS26780 PF07963 Prokaryotic N-terminal methylation motif JHW28_RS26785 PF05567 Neisseria PilC beta-propeller domain JHW28_RS26815 PF02401 LytB protein JHW28_RS26820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS26825 PF01252 Signal peptidase (SPase) II JHW28_RS26830 PF06827 Zinc finger found in FPG and IleRS JHW28_RS26830 PF00133 tRNA synthetases class I (I, L, M and V) JHW28_RS26830 PF08264 Anticodon-binding domain of tRNA JHW28_RS26835 PF01687 Riboflavin kinase JHW28_RS26835 PF06574 FAD synthetase JHW28_RS26840 PF03023 Lipid II flippase MurJ JHW28_RS26845 PF01649 Ribosomal protein S20 JHW28_RS26850 PF05981 CreA protein JHW28_RS26855 PF01472 PUA domain JHW28_RS26855 PF00696 Amino acid kinase family JHW28_RS26860 PF01926 50S ribosome-binding GTPase JHW28_RS26860 PF01018 GTP1/OBG JHW28_RS26865 PF01016 Ribosomal L27 protein JHW28_RS26870 PF00829 Ribosomal prokaryotic L21 protein JHW28_RS26875 PF00348 Polyprenyl synthetase JHW28_RS26880 PF03831 PhnA domain JHW28_RS26880 PF08274 PhnA Zinc-Ribbon JHW28_RS26885 PF12804 MobA-like NTP transferase domain JHW28_RS26885 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS26890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHW28_RS26890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS26900 PF03350 Uncharacterized protein family, UPF0114 JHW28_RS26915 PF05362 Lon protease (S16) C-terminal proteolytic domain JHW28_RS26915 PF13654 AAA domain JHW28_RS26935 PF01272 Transcription elongation factor, GreA/GreB, C-term JHW28_RS26935 PF03449 Transcription elongation factor, N-terminal JHW28_RS26940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JHW28_RS26940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JHW28_RS26945 PF12848 ABC transporter JHW28_RS26945 PF00005 ABC transporter JHW28_RS26950 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS26950 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS26950 PF00563 EAL domain JHW28_RS26955 PF00464 Serine hydroxymethyltransferase JHW28_RS26960 PF00375 Sodium:dicarboxylate symporter family JHW28_RS26965 PF07729 FCD domain JHW28_RS26965 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS26975 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS26975 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHW28_RS26980 PF04328 Selenoprotein, putative JHW28_RS26985 PF13722 5TM C-terminal transporter carbon starvation CstA JHW28_RS26985 PF02554 Carbon starvation protein CstA JHW28_RS26995 PF07238 PilZ domain JHW28_RS27005 PF18073 Rubredoxin metal binding domain JHW28_RS27015 PF06628 Catalase-related immune-responsive JHW28_RS27015 PF00199 Catalase JHW28_RS27020 PF01741 Large-conductance mechanosensitive channel, MscL JHW28_RS27025 PF00175 Oxidoreductase NAD-binding domain JHW28_RS27025 PF00970 Oxidoreductase FAD-binding domain JHW28_RS27030 PF05175 Methyltransferase small domain JHW28_RS27040 PF02322 Cytochrome bd terminal oxidase subunit II JHW28_RS27045 PF01654 Cytochrome bd terminal oxidase subunit I JHW28_RS27070 PF00860 Permease family JHW28_RS27075 PF05958 tRNA (Uracil-5-)-methyltransferase JHW28_RS27080 PF01220 Dehydroquinase class II JHW28_RS27085 PF08501 Shikimate dehydrogenase substrate binding domain JHW28_RS27085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JHW28_RS27090 PF03594 Benzoate membrane transport protein JHW28_RS27095 PF00155 Aminotransferase class I and II JHW28_RS27095 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS27100 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS27100 PF17938 Tetracyclin repressor-like, C-terminal domain JHW28_RS27105 PF01261 Xylose isomerase-like TIM barrel JHW28_RS27105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHW28_RS27110 PF07690 Major Facilitator Superfamily JHW28_RS27125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JHW28_RS27125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHW28_RS27135 PF00890 FAD binding domain JHW28_RS27140 PF00775 Dioxygenase JHW28_RS27145 PF00775 Dioxygenase JHW28_RS27145 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JHW28_RS27150 PF03466 LysR substrate binding domain JHW28_RS27150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS27155 PF04228 Putative neutral zinc metallopeptidase JHW28_RS27175 PF13302 Acetyltransferase (GNAT) domain JHW28_RS27180 PF00850 Histone deacetylase domain JHW28_RS27185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS27185 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS27190 PF00270 DEAD/DEAH box helicase JHW28_RS27190 PF00271 Helicase conserved C-terminal domain JHW28_RS27200 PF00892 EamA-like transporter family JHW28_RS27205 PF13404 AsnC-type helix-turn-helix domain JHW28_RS27205 PF01037 Lrp/AsnC ligand binding domain JHW28_RS27210 PF00929 Exonuclease JHW28_RS27210 PF04851 Type III restriction enzyme, res subunit JHW28_RS27210 PF13307 Helicase C-terminal domain JHW28_RS27220 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JHW28_RS27235 PF04408 Helicase associated domain (HA2) JHW28_RS27235 PF08482 ATP-dependent helicase C-terminal JHW28_RS27235 PF00271 Helicase conserved C-terminal domain JHW28_RS27235 PF00270 DEAD/DEAH box helicase JHW28_RS27245 PF01545 Cation efflux family JHW28_RS27245 PF16916 Dimerisation domain of Zinc Transporter JHW28_RS27255 PF01037 Lrp/AsnC ligand binding domain JHW28_RS27265 PF00849 RNA pseudouridylate synthase JHW28_RS27270 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JHW28_RS27270 PF01048 Phosphorylase superfamily JHW28_RS27275 PF18158 Adaptive response protein AidB N-terminal domain JHW28_RS27275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS27275 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS27280 PF00072 Response regulator receiver domain JHW28_RS27280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS27280 PF01627 Hpt domain JHW28_RS27280 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS27285 PF08543 Phosphomethylpyrimidine kinase JHW28_RS27290 PF02581 Thiamine monophosphate synthase JHW28_RS27295 PF00202 Aminotransferase class-III JHW28_RS27310 PF00919 Uncharacterized protein family UPF0004 JHW28_RS27310 PF01938 TRAM domain JHW28_RS27310 PF04055 Radical SAM superfamily JHW28_RS27315 PF02562 PhoH-like protein JHW28_RS27320 PF02130 Uncharacterized protein family UPF0054 JHW28_RS27325 PF03471 Transporter associated domain JHW28_RS27325 PF00571 CBS domain JHW28_RS27330 PF00795 Carbon-nitrogen hydrolase JHW28_RS27345 PF00133 tRNA synthetases class I (I, L, M and V) JHW28_RS27345 PF13603 Leucyl-tRNA synthetase, Domain 2 JHW28_RS27345 PF08264 Anticodon-binding domain of tRNA JHW28_RS27345 PF09334 tRNA synthetases class I (M) JHW28_RS27365 PF13406 Transglycosylase SLT domain JHW28_RS27370 PF17676 LD-carboxypeptidase C-terminal domain JHW28_RS27370 PF02016 LD-carboxypeptidase N-terminal domain JHW28_RS27375 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JHW28_RS27375 PF04055 Radical SAM superfamily JHW28_RS27380 PF03099 Biotin/lipoate A/B protein ligase family JHW28_RS27385 PF04359 Protein of unknown function (DUF493) JHW28_RS27390 PF00768 D-alanyl-D-alanine carboxypeptidase JHW28_RS27390 PF07943 Penicillin-binding protein 5, C-terminal domain JHW28_RS27400 PF13406 Transglycosylase SLT domain JHW28_RS27405 PF01098 Cell cycle protein JHW28_RS27410 PF00905 Penicillin binding protein transpeptidase domain JHW28_RS27410 PF03717 Penicillin-binding Protein dimerisation domain JHW28_RS27415 PF02590 Predicted SPOUT methyltransferase JHW28_RS27425 PF01467 Cytidylyltransferase-like JHW28_RS27430 PF00171 Aldehyde dehydrogenase family JHW28_RS27435 PF02245 Methylpurine-DNA glycosylase (MPG) JHW28_RS27440 PF09335 SNARE associated Golgi protein JHW28_RS27450 PF04172 LrgB-like family JHW28_RS27460 PF01575 MaoC like domain JHW28_RS27470 PF13460 NAD(P)H-binding JHW28_RS27480 PF02441 Flavoprotein JHW28_RS27485 PF01225 Mur ligase family, catalytic domain JHW28_RS27485 PF02875 Mur ligase family, glutamate ligase domain JHW28_RS27485 PF08245 Mur ligase middle domain JHW28_RS27490 PF01590 GAF domain JHW28_RS27490 PF02954 Bacterial regulatory protein, Fis family JHW28_RS27490 PF00158 Sigma-54 interaction domain JHW28_RS27495 PF00171 Aldehyde dehydrogenase family JHW28_RS27500 PF13520 Amino acid permease JHW28_RS27505 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JHW28_RS27510 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JHW28_RS27515 PF00583 Acetyltransferase (GNAT) family JHW28_RS27520 PF09335 SNARE associated Golgi protein JHW28_RS27525 PF06167 Glucose-regulated metallo-peptidase M90 JHW28_RS27530 PF00719 Inorganic pyrophosphatase JHW28_RS27545 PF03060 Nitronate monooxygenase JHW28_RS27555 PF01613 Flavin reductase like domain JHW28_RS27565 PF03737 Aldolase/RraA JHW28_RS27570 PF00180 Isocitrate/isopropylmalate dehydrogenase JHW28_RS27570 PF03737 Aldolase/RraA JHW28_RS27575 PF07836 DmpG-like communication domain JHW28_RS27575 PF00682 HMGL-like JHW28_RS27585 PF07690 Major Facilitator Superfamily JHW28_RS27590 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS27590 PF00107 Zinc-binding dehydrogenase JHW28_RS27595 PF00873 AcrB/AcrD/AcrF family JHW28_RS27600 PF13533 Biotin-lipoyl like JHW28_RS27605 PF01757 Acyltransferase family JHW28_RS27610 PF00144 Beta-lactamase JHW28_RS27615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS27615 PF03466 LysR substrate binding domain JHW28_RS27625 PF01381 Helix-turn-helix JHW28_RS27630 PF05973 Phage derived protein Gp49-like (DUF891) JHW28_RS27640 PF14765 Polyketide synthase dehydratase JHW28_RS27640 PF00698 Acyl transferase domain JHW28_RS27640 PF08659 KR domain JHW28_RS27640 PF02801 Beta-ketoacyl synthase, C-terminal domain JHW28_RS27640 PF00550 Phosphopantetheine attachment site JHW28_RS27640 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS27640 PF16197 Ketoacyl-synthetase C-terminal extension JHW28_RS27640 PF00109 Beta-ketoacyl synthase, N-terminal domain JHW28_RS27650 PF00394 Multicopper oxidase JHW28_RS27650 PF07732 Multicopper oxidase JHW28_RS27655 PF02609 Exonuclease VII small subunit JHW28_RS27660 PF00348 Polyprenyl synthetase JHW28_RS27665 PF02780 Transketolase, C-terminal domain JHW28_RS27665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JHW28_RS27665 PF02779 Transketolase, pyrimidine binding domain JHW28_RS27670 PF00593 TonB dependent receptor JHW28_RS27670 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS27675 PF01497 Periplasmic binding protein JHW28_RS27685 PF00925 GTP cyclohydrolase II JHW28_RS27695 PF04608 Phosphatidylglycerophosphatase A JHW28_RS27700 PF00586 AIR synthase related protein, N-terminal domain JHW28_RS27700 PF02769 AIR synthase related protein, C-terminal domain JHW28_RS27705 PF01029 NusB family JHW28_RS27710 PF00885 6,7-dimethyl-8-ribityllumazine synthase JHW28_RS27715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JHW28_RS27715 PF00925 GTP cyclohydrolase II JHW28_RS27720 PF00677 Lumazine binding domain JHW28_RS27725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHW28_RS27725 PF01872 RibD C-terminal domain JHW28_RS27730 PF03477 ATP cone domain JHW28_RS27745 PF00085 Thioredoxin JHW28_RS27760 PF00005 ABC transporter JHW28_RS27775 PF03922 OmpW family JHW28_RS27780 PF01370 NAD dependent epimerase/dehydratase family JHW28_RS27790 PF00271 Helicase conserved C-terminal domain JHW28_RS27790 PF00270 DEAD/DEAH box helicase JHW28_RS27790 PF08494 DEAD/H associated JHW28_RS27795 PF07690 Major Facilitator Superfamily JHW28_RS27805 PF03372 Endonuclease/Exonuclease/phosphatase family JHW28_RS27810 PF13091 PLD-like domain JHW28_RS27815 PF03706 Lysylphosphatidylglycerol synthase TM region JHW28_RS27835 PF00857 Isochorismatase family JHW28_RS27840 PF00436 Single-strand binding protein family JHW28_RS27845 PF07690 Major Facilitator Superfamily JHW28_RS27850 PF17760 UvrA interaction domain JHW28_RS27850 PF17755 UvrA DNA-binding domain JHW28_RS27855 PF00210 Ferritin-like domain JHW28_RS27860 PF06628 Catalase-related immune-responsive JHW28_RS27860 PF00199 Catalase JHW28_RS27865 PF01196 Ribosomal protein L17 JHW28_RS27870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JHW28_RS27870 PF01000 RNA polymerase Rpb3/RpoA insert domain JHW28_RS27870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JHW28_RS27875 PF01479 S4 domain JHW28_RS27875 PF00163 Ribosomal protein S4/S9 N-terminal domain JHW28_RS27880 PF00411 Ribosomal protein S11 JHW28_RS27885 PF00416 Ribosomal protein S13/S18 JHW28_RS27890 PF00444 Ribosomal protein L36 JHW28_RS27895 PF00344 SecY translocase JHW28_RS27900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JHW28_RS27905 PF00327 Ribosomal protein L30p/L7e JHW28_RS27910 PF00333 Ribosomal protein S5, N-terminal domain JHW28_RS27910 PF03719 Ribosomal protein S5, C-terminal domain JHW28_RS27915 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JHW28_RS27920 PF00347 Ribosomal protein L6 JHW28_RS27925 PF00410 Ribosomal protein S8 JHW28_RS27930 PF00253 Ribosomal protein S14p/S29e JHW28_RS27935 PF00281 Ribosomal protein L5 JHW28_RS27935 PF00673 ribosomal L5P family C-terminus JHW28_RS27940 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JHW28_RS27940 PF00467 KOW motif JHW28_RS27945 PF00238 Ribosomal protein L14p/L23e JHW28_RS27950 PF00366 Ribosomal protein S17 JHW28_RS27955 PF00831 Ribosomal L29 protein JHW28_RS27960 PF00252 Ribosomal protein L16p/L10e JHW28_RS27965 PF07650 KH domain JHW28_RS27965 PF00189 Ribosomal protein S3, C-terminal domain JHW28_RS27970 PF00237 Ribosomal protein L22p/L17e JHW28_RS27975 PF00203 Ribosomal protein S19 JHW28_RS27980 PF03947 Ribosomal Proteins L2, C-terminal domain JHW28_RS27980 PF00181 Ribosomal Proteins L2, RNA binding domain JHW28_RS27985 PF00276 Ribosomal protein L23 JHW28_RS27990 PF00573 Ribosomal protein L4/L1 family JHW28_RS27995 PF00297 Ribosomal protein L3 JHW28_RS28000 PF00338 Ribosomal protein S10p/S20e JHW28_RS28005 PF03143 Elongation factor Tu C-terminal domain JHW28_RS28005 PF00009 Elongation factor Tu GTP binding domain JHW28_RS28005 PF03144 Elongation factor Tu domain 2 JHW28_RS28010 PF00009 Elongation factor Tu GTP binding domain JHW28_RS28010 PF03764 Elongation factor G, domain IV JHW28_RS28010 PF14492 Elongation Factor G, domain II JHW28_RS28010 PF03144 Elongation factor Tu domain 2 JHW28_RS28010 PF00679 Elongation factor G C-terminus JHW28_RS28015 PF00177 Ribosomal protein S7p/S5e JHW28_RS28020 PF00164 Ribosomal protein S12/S23 JHW28_RS28025 PF04997 RNA polymerase Rpb1, domain 1 JHW28_RS28025 PF04983 RNA polymerase Rpb1, domain 3 JHW28_RS28025 PF05000 RNA polymerase Rpb1, domain 4 JHW28_RS28025 PF04998 RNA polymerase Rpb1, domain 5 JHW28_RS28025 PF00623 RNA polymerase Rpb1, domain 2 JHW28_RS28030 PF04563 RNA polymerase beta subunit JHW28_RS28030 PF04561 RNA polymerase Rpb2, domain 2 JHW28_RS28030 PF04565 RNA polymerase Rpb2, domain 3 JHW28_RS28030 PF00562 RNA polymerase Rpb2, domain 6 JHW28_RS28030 PF04560 RNA polymerase Rpb2, domain 7 JHW28_RS28030 PF10385 RNA polymerase beta subunit external 1 domain JHW28_RS28035 PF00542 Ribosomal protein L7/L12 C-terminal domain JHW28_RS28035 PF16320 Ribosomal protein L7/L12 dimerisation domain JHW28_RS28040 PF00466 Ribosomal protein L10 JHW28_RS28045 PF00687 Ribosomal protein L1p/L10e family JHW28_RS28050 PF00298 Ribosomal protein L11, RNA binding domain JHW28_RS28050 PF03946 Ribosomal protein L11, N-terminal domain JHW28_RS28055 PF02357 Transcription termination factor nusG JHW28_RS28055 PF00467 KOW motif JHW28_RS28060 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JHW28_RS28070 PF00009 Elongation factor Tu GTP binding domain JHW28_RS28070 PF03143 Elongation factor Tu C-terminal domain JHW28_RS28070 PF03144 Elongation factor Tu domain 2 JHW28_RS28095 PF03309 Type III pantothenate kinase JHW28_RS28100 PF02237 Biotin protein ligase C terminal domain JHW28_RS28100 PF03099 Biotin/lipoate A/B protein ligase family JHW28_RS28100 PF08279 HTH domain JHW28_RS28130 PF01479 S4 domain JHW28_RS28130 PF00579 tRNA synthetases class I (W and Y) JHW28_RS28135 PF01551 Peptidase family M23 JHW28_RS28135 PF04225 Opacity-associated protein A LysM-like domain JHW28_RS28140 PF03702 Anhydro-N-acetylmuramic acid kinase JHW28_RS28145 PF01521 Iron-sulphur cluster biosynthesis JHW28_RS28150 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHW28_RS28150 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHW28_RS28155 PF03653 Uncharacterised protein family (UPF0093) JHW28_RS28170 PF00106 short chain dehydrogenase JHW28_RS28175 PF01230 HIT domain JHW28_RS28180 PF03232 Ubiquinone biosynthesis protein COQ7 JHW28_RS28185 PF02566 OsmC-like protein JHW28_RS28190 PF00027 Cyclic nucleotide-binding domain JHW28_RS28190 PF13545 Crp-like helix-turn-helix domain JHW28_RS28200 PF00218 Indole-3-glycerol phosphate synthase JHW28_RS28205 PF02885 Glycosyl transferase family, helical bundle domain JHW28_RS28205 PF00591 Glycosyl transferase family, a/b domain JHW28_RS28210 PF00117 Glutamine amidotransferase class-I JHW28_RS28215 PF03797 Autotransporter beta-domain JHW28_RS28215 PF00657 GDSL-like Lipase/Acylhydrolase JHW28_RS28220 PF04715 Anthranilate synthase component I, N terminal region JHW28_RS28220 PF00425 chorismate binding enzyme JHW28_RS28225 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS28230 PF00834 Ribulose-phosphate 3 epimerase family JHW28_RS28235 PF00465 Iron-containing alcohol dehydrogenase JHW28_RS28240 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS28245 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS28255 PF08402 TOBE domain JHW28_RS28255 PF00005 ABC transporter JHW28_RS28260 PF00196 Bacterial regulatory proteins, luxR family JHW28_RS28260 PF00072 Response regulator receiver domain JHW28_RS28265 PF00672 HAMP domain JHW28_RS28265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS28265 PF07730 Histidine kinase JHW28_RS28275 PF05099 Tellurite resistance protein TerB JHW28_RS28275 PF00226 DnaJ domain JHW28_RS28280 PF00483 Nucleotidyl transferase JHW28_RS28285 PF01636 Phosphotransferase enzyme family JHW28_RS28290 PF03968 OstA-like protein JHW28_RS28290 PF04453 LPS transport system D JHW28_RS28295 PF09312 SurA N-terminal domain JHW28_RS28295 PF00639 PPIC-type PPIASE domain JHW28_RS28300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JHW28_RS28305 PF00398 Ribosomal RNA adenine dimethylase JHW28_RS28310 PF04379 ApaG domain JHW28_RS28315 PF00149 Calcineurin-like phosphoesterase JHW28_RS28320 PF00581 Rhodanese-like domain JHW28_RS28325 PF08298 PrkA AAA domain JHW28_RS28325 PF06798 PrkA serine protein kinase C-terminal domain JHW28_RS28330 PF04285 Protein of unknown function (DUF444) JHW28_RS28335 PF04293 SpoVR like protein JHW28_RS28340 PF01743 Poly A polymerase head domain JHW28_RS28340 PF01966 HD domain JHW28_RS28340 PF12627 Probable RNA and SrmB- binding site of polymerase A JHW28_RS28350 PF02152 Dihydroneopterin aldolase JHW28_RS28355 PF02660 Glycerol-3-phosphate acyltransferase JHW28_RS28360 PF00814 Glycoprotease family JHW28_RS28365 PF01165 Ribosomal protein S21 JHW28_RS28370 PF01807 CHC2 zinc finger JHW28_RS28370 PF08278 DNA primase DnaG DnaB-binding JHW28_RS28370 PF10410 DnaB-helicase binding domain of primase JHW28_RS28370 PF13662 Toprim domain JHW28_RS28370 PF08275 DNA primase catalytic core, N-terminal domain JHW28_RS28375 PF04546 Sigma-70, non-essential region JHW28_RS28375 PF04542 Sigma-70 region 2 JHW28_RS28375 PF04539 Sigma-70 region 3 JHW28_RS28375 PF04545 Sigma-70, region 4 JHW28_RS28375 PF00140 Sigma-70 factor, region 1.2 JHW28_RS28375 PF03979 Sigma-70 factor, region 1.1 JHW28_RS28380 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS28380 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS28380 PF00563 EAL domain JHW28_RS28395 PF01011 PQQ enzyme repeat JHW28_RS28405 PF01593 Flavin containing amine oxidoreductase JHW28_RS28410 PF00795 Carbon-nitrogen hydrolase JHW28_RS28415 PF00675 Insulinase (Peptidase family M16) JHW28_RS28415 PF05193 Peptidase M16 inactive domain JHW28_RS28420 PF08042 PqqA family JHW28_RS28425 PF12706 Beta-lactamase superfamily domain JHW28_RS28430 PF03070 TENA/THI-4/PQQC family JHW28_RS28435 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JHW28_RS28440 PF13186 Iron-sulfur cluster-binding domain JHW28_RS28440 PF04055 Radical SAM superfamily JHW28_RS28445 PF00326 Prolyl oligopeptidase family JHW28_RS28450 PF01679 Proteolipid membrane potential modulator JHW28_RS28465 PF00202 Aminotransferase class-III JHW28_RS28470 PF03475 3-alpha domain JHW28_RS28470 PF03473 MOSC domain JHW28_RS28475 PF03466 LysR substrate binding domain JHW28_RS28475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS28480 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS28480 PF12806 Acetyl-CoA dehydrogenase C-terminal like JHW28_RS28480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS28480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS28485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS28485 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS28485 PF12806 Acetyl-CoA dehydrogenase C-terminal like JHW28_RS28485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS28490 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS28495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHW28_RS28495 PF12806 Acetyl-CoA dehydrogenase C-terminal like JHW28_RS28495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHW28_RS28495 PF02770 Acyl-CoA dehydrogenase, middle domain JHW28_RS28510 PF08241 Methyltransferase domain JHW28_RS28515 PF08241 Methyltransferase domain JHW28_RS28515 PF12697 Alpha/beta hydrolase family JHW28_RS28520 PF00155 Aminotransferase class I and II JHW28_RS28525 PF06968 Biotin and Thiamin Synthesis associated domain JHW28_RS28525 PF04055 Radical SAM superfamily JHW28_RS28530 PF00156 Phosphoribosyl transferase domain JHW28_RS28535 PF03459 TOBE domain JHW28_RS28535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS28545 PF01636 Phosphotransferase enzyme family JHW28_RS28550 PF00892 EamA-like transporter family JHW28_RS28560 PF01274 Malate synthase JHW28_RS28575 PF00929 Exonuclease JHW28_RS28575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHW28_RS28575 PF14579 Helix-hairpin-helix motif JHW28_RS28575 PF02811 PHP domain JHW28_RS28575 PF11490 DNA polymerase III polC-type N-terminus II JHW28_RS28575 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHW28_RS28580 PF08281 Sigma-70, region 4 JHW28_RS28580 PF04542 Sigma-70 region 2 JHW28_RS28585 PF04773 FecR protein JHW28_RS28585 PF16220 Domain of unknown function (DUF4880) JHW28_RS28590 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS28590 PF00593 TonB dependent receptor JHW28_RS28610 PF00043 Glutathione S-transferase, C-terminal domain JHW28_RS28610 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS28615 PF06123 Inner membrane protein CreD JHW28_RS28620 PF00672 HAMP domain JHW28_RS28620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS28620 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS28625 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS28625 PF00072 Response regulator receiver domain JHW28_RS28630 PF18030 RimK PreATP-grasp domain JHW28_RS28630 PF08443 RimK-like ATP-grasp domain JHW28_RS28635 PF01553 Acyltransferase JHW28_RS28650 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS28650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHW28_RS28655 PF00551 Formyl transferase JHW28_RS28665 PF08669 Glycine cleavage T-protein C-terminal barrel domain JHW28_RS28665 PF17806 Sarcosine oxidase A3 domain JHW28_RS28665 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS28665 PF01571 Aminomethyltransferase folate-binding domain JHW28_RS28670 PF04267 Sarcosine oxidase, delta subunit family JHW28_RS28675 PF01266 FAD dependent oxidoreductase JHW28_RS28680 PF00464 Serine hydroxymethyltransferase JHW28_RS28690 PF01212 Beta-eliminating lyase JHW28_RS28695 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHW28_RS28710 PF00175 Oxidoreductase NAD-binding domain JHW28_RS28710 PF00042 Globin JHW28_RS28710 PF00970 Oxidoreductase FAD-binding domain JHW28_RS28715 PF00355 Rieske [2Fe-2S] domain JHW28_RS28715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JHW28_RS28725 PF01012 Electron transfer flavoprotein domain JHW28_RS28725 PF00766 Electron transfer flavoprotein FAD-binding domain JHW28_RS28730 PF02665 Nitrate reductase gamma subunit JHW28_RS28730 PF13183 4Fe-4S dicluster domain JHW28_RS28730 PF02754 Cysteine-rich domain JHW28_RS28735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHW28_RS28770 PF12833 Helix-turn-helix domain JHW28_RS28770 PF01965 DJ-1/PfpI family JHW28_RS28780 PF05853 beta-keto acid cleavage enzyme JHW28_RS28785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHW28_RS28785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHW28_RS28795 PF06155 Protein of unknown function (DUF971) JHW28_RS28795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JHW28_RS28805 PF00583 Acetyltransferase (GNAT) family JHW28_RS28810 PF01965 DJ-1/PfpI family JHW28_RS28810 PF12833 Helix-turn-helix domain JHW28_RS28815 PF03313 Serine dehydratase alpha chain JHW28_RS28815 PF03315 Serine dehydratase beta chain JHW28_RS28820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHW28_RS28825 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS28830 PF00571 CBS domain JHW28_RS28830 PF00005 ABC transporter JHW28_RS28835 PF02028 BCCT, betaine/carnitine/choline family transporter JHW28_RS28840 PF13977 BetI-type transcriptional repressor, C-terminal JHW28_RS28840 PF00440 Bacterial regulatory proteins, tetR family JHW28_RS28845 PF00171 Aldehyde dehydrogenase family JHW28_RS28850 PF00732 GMC oxidoreductase JHW28_RS28850 PF05199 GMC oxidoreductase JHW28_RS28860 PF01523 Putative modulator of DNA gyrase JHW28_RS28865 PF07690 Major Facilitator Superfamily JHW28_RS28870 PF00271 Helicase conserved C-terminal domain JHW28_RS28870 PF00270 DEAD/DEAH box helicase JHW28_RS28870 PF03880 DbpA RNA binding domain JHW28_RS28880 PF12805 FUSC-like inner membrane protein yccS JHW28_RS28890 PF13673 Acetyltransferase (GNAT) domain JHW28_RS28900 PF01863 Protein of unknown function DUF45 JHW28_RS28905 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS28905 PF00563 EAL domain JHW28_RS28905 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS28915 PF01116 Fructose-bisphosphate aldolase class-II JHW28_RS28930 PF00162 Phosphoglycerate kinase JHW28_RS28935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHW28_RS28935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHW28_RS28940 PF00456 Transketolase, thiamine diphosphate binding domain JHW28_RS28940 PF02780 Transketolase, C-terminal domain JHW28_RS28940 PF02779 Transketolase, pyrimidine binding domain JHW28_RS28945 PF13649 Methyltransferase domain JHW28_RS28950 PF02773 S-adenosylmethionine synthetase, C-terminal domain JHW28_RS28950 PF00438 S-adenosylmethionine synthetase, N-terminal domain JHW28_RS28950 PF02772 S-adenosylmethionine synthetase, central domain JHW28_RS28955 PF01653 NAD-dependent DNA ligase adenylation domain JHW28_RS28955 PF03120 NAD-dependent DNA ligase OB-fold domain JHW28_RS28960 PF06476 Protein of unknown function (DUF1090) JHW28_RS28985 PF07690 Major Facilitator Superfamily JHW28_RS28990 PF00999 Sodium/hydrogen exchanger family JHW28_RS28995 PF01226 Formate/nitrite transporter JHW28_RS29005 PF05221 S-adenosyl-L-homocysteine hydrolase JHW28_RS29005 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JHW28_RS29010 PF02219 Methylenetetrahydrofolate reductase JHW28_RS29025 PF00270 DEAD/DEAH box helicase JHW28_RS29025 PF00271 Helicase conserved C-terminal domain JHW28_RS29030 PF04264 YceI-like domain JHW28_RS29035 PF01292 Prokaryotic cytochrome b561 JHW28_RS29040 PF00202 Aminotransferase class-III JHW28_RS29045 PF04452 RNA methyltransferase JHW28_RS29050 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS29060 PF01266 FAD dependent oxidoreductase JHW28_RS29065 PF03466 LysR substrate binding domain JHW28_RS29065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS29070 PF03006 Haemolysin-III related JHW28_RS29075 PF03466 LysR substrate binding domain JHW28_RS29075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS29090 PF00698 Acyl transferase domain JHW28_RS29095 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JHW28_RS29105 PF01039 Carboxyl transferase domain JHW28_RS29110 PF06857 Malonate decarboxylase delta subunit (MdcD) JHW28_RS29115 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JHW28_RS29120 PF16957 Malonate decarboxylase, alpha subunit, transporter JHW28_RS29135 PF00072 Response regulator receiver domain JHW28_RS29135 PF02895 Signal transducing histidine kinase, homodimeric domain JHW28_RS29135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS29135 PF01584 CheW-like domain JHW28_RS29135 PF01627 Hpt domain JHW28_RS29140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JHW28_RS29140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS29145 PF01584 CheW-like domain JHW28_RS29150 PF00072 Response regulator receiver domain JHW28_RS29155 PF00072 Response regulator receiver domain JHW28_RS29160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JHW28_RS29160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JHW28_RS29170 PF02622 Uncharacterized ACR, COG1678 JHW28_RS29175 PF03652 Holliday junction resolvase JHW28_RS29180 PF00156 Phosphoribosyl transferase domain JHW28_RS29185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHW28_RS29185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHW28_RS29190 PF01979 Amidohydrolase family JHW28_RS29200 PF00877 NlpC/P60 family JHW28_RS29205 PF00437 Type II/IV secretion system protein JHW28_RS29210 PF01168 Alanine racemase, N-terminal domain JHW28_RS29215 PF03807 NADP oxidoreductase coenzyme F420-dependent JHW28_RS29215 PF14748 Pyrroline-5-carboxylate reductase dimerisation JHW28_RS29220 PF02325 YGGT family JHW28_RS29225 PF02594 Uncharacterised ACR, YggU family COG1872 JHW28_RS29230 PF00561 alpha/beta hydrolase fold JHW28_RS29235 PF07021 Methionine biosynthesis protein MetW JHW28_RS29235 PF00561 alpha/beta hydrolase fold JHW28_RS29245 PF01725 Ham1 family JHW28_RS29250 PF06969 HemN C-terminal domain JHW28_RS29250 PF04055 Radical SAM superfamily JHW28_RS29260 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JHW28_RS29265 PF02390 Putative methyltransferase JHW28_RS29270 PF05690 Thiazole biosynthesis protein ThiG JHW28_RS29275 PF05690 Thiazole biosynthesis protein ThiG JHW28_RS29275 PF02597 ThiS family JHW28_RS29280 PF04241 Protein of unknown function (DUF423) JHW28_RS29285 PF00912 Transglycosylase JHW28_RS29290 PF04542 Sigma-70 region 2 JHW28_RS29290 PF00140 Sigma-70 factor, region 1.2 JHW28_RS29290 PF04545 Sigma-70, region 4 JHW28_RS29295 PF18075 FtsX extracellular domain JHW28_RS29300 PF00005 ABC transporter JHW28_RS29305 PF02881 SRP54-type protein, helical bundle domain JHW28_RS29305 PF00448 SRP54-type protein, GTPase domain JHW28_RS29310 PF00675 Insulinase (Peptidase family M16) JHW28_RS29310 PF05193 Peptidase M16 inactive domain JHW28_RS29315 PF05193 Peptidase M16 inactive domain JHW28_RS29335 PF00581 Rhodanese-like domain JHW28_RS29345 PF00171 Aldehyde dehydrogenase family JHW28_RS29355 PF00732 GMC oxidoreductase JHW28_RS29355 PF05199 GMC oxidoreductase JHW28_RS29360 PF01467 Cytidylyltransferase-like JHW28_RS29365 PF00037 4Fe-4S binding domain JHW28_RS29370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JHW28_RS29370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JHW28_RS29370 PF06827 Zinc finger found in FPG and IleRS JHW28_RS29380 PF10672 S-adenosylmethionine-dependent methyltransferase JHW28_RS29380 PF17785 PUA-like domain JHW28_RS29390 PF00920 Dehydratase family JHW28_RS29395 PF07715 TonB-dependent Receptor Plug Domain JHW28_RS29395 PF00593 TonB dependent receptor JHW28_RS29395 PF07660 Secretin and TonB N terminus short domain JHW28_RS29415 PF00375 Sodium:dicarboxylate symporter family JHW28_RS29420 PF00186 Dihydrofolate reductase JHW28_RS29430 PF01926 50S ribosome-binding GTPase JHW28_RS29430 PF12631 MnmE helical domain JHW28_RS29430 PF10396 GTP-binding protein TrmE N-terminus JHW28_RS29435 PF01966 HD domain JHW28_RS29440 PF01266 FAD dependent oxidoreductase JHW28_RS29450 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29455 PF00005 ABC transporter JHW28_RS29455 PF08402 TOBE domain JHW28_RS29460 PF03466 LysR substrate binding domain JHW28_RS29460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS29465 PF00403 Heavy-metal-associated domain JHW28_RS29470 PF13411 MerR HTH family regulatory protein JHW28_RS29475 PF00303 Thymidylate synthase JHW28_RS29480 PF01790 Prolipoprotein diacylglyceryl transferase JHW28_RS29485 PF01925 Sulfite exporter TauE/SafE JHW28_RS29495 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS29495 PF02896 PEP-utilising enzyme, TIM barrel domain JHW28_RS29495 PF01590 GAF domain JHW28_RS29495 PF05524 PEP-utilising enzyme, N-terminal JHW28_RS29500 PF00293 NUDIX domain JHW28_RS29515 PF00585 C-terminal regulatory domain of Threonine dehydratase JHW28_RS29515 PF00291 Pyridoxal-phosphate dependent enzyme JHW28_RS29520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JHW28_RS29525 PF04389 Peptidase family M28 JHW28_RS29530 PF06977 SdiA-regulated JHW28_RS29535 PF06977 SdiA-regulated JHW28_RS29540 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHW28_RS29545 PF02913 FAD linked oxidases, C-terminal domain JHW28_RS29545 PF01565 FAD binding domain JHW28_RS29550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHW28_RS29550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHW28_RS29550 PF01842 ACT domain JHW28_RS29560 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS29565 PF04463 Protein of unknown function (DUF523) JHW28_RS29590 PF01804 Penicillin amidase JHW28_RS29595 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29600 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29605 PF08402 TOBE domain JHW28_RS29605 PF00005 ABC transporter JHW28_RS29610 PF13416 Bacterial extracellular solute-binding protein JHW28_RS29615 PF13416 Bacterial extracellular solute-binding protein JHW28_RS29620 PF00202 Aminotransferase class-III JHW28_RS29625 PF00120 Glutamine synthetase, catalytic domain JHW28_RS29630 PF07722 Peptidase C26 JHW28_RS29635 PF00120 Glutamine synthetase, catalytic domain JHW28_RS29645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS29645 PF03459 TOBE domain JHW28_RS29650 PF00005 ABC transporter JHW28_RS29655 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29660 PF00296 Luciferase-like monooxygenase JHW28_RS29665 PF09084 NMT1/THI5 like JHW28_RS29670 PF03358 NADPH-dependent FMN reductase JHW28_RS29675 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHW28_RS29675 PF00578 AhpC/TSA family JHW28_RS29680 PF03573 outer membrane porin, OprD family JHW28_RS29685 PF00583 Acetyltransferase (GNAT) family JHW28_RS29685 PF00696 Amino acid kinase family JHW28_RS29690 PF01546 Peptidase family M20/M25/M40 JHW28_RS29690 PF07687 Peptidase dimerisation domain JHW28_RS29700 PF01037 Lrp/AsnC ligand binding domain JHW28_RS29700 PF13404 AsnC-type helix-turn-helix domain JHW28_RS29710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JHW28_RS29710 PF00437 Type II/IV secretion system protein JHW28_RS29720 PF02347 Glycine cleavage system P-protein JHW28_RS29725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS29740 PF01597 Glycine cleavage H-protein JHW28_RS29745 PF08669 Glycine cleavage T-protein C-terminal barrel domain JHW28_RS29745 PF01571 Aminomethyltransferase folate-binding domain JHW28_RS29750 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29760 PF01494 FAD binding domain JHW28_RS29765 PF01494 FAD binding domain JHW28_RS29770 PF00557 Metallopeptidase family M24 JHW28_RS29770 PF05195 Aminopeptidase P, N-terminal domain JHW28_RS29775 PF03695 Uncharacterised protein family (UPF0149) JHW28_RS29785 PF05164 Cell division protein ZapA JHW28_RS29795 PF01812 5-formyltetrahydrofolate cyclo-ligase family JHW28_RS29810 PF13533 Biotin-lipoyl like JHW28_RS29815 PF00005 ABC transporter JHW28_RS29830 PF08240 Alcohol dehydrogenase GroES-like domain JHW28_RS29830 PF00107 Zinc-binding dehydrogenase JHW28_RS29835 PF07690 Major Facilitator Superfamily JHW28_RS29845 PF00970 Oxidoreductase FAD-binding domain JHW28_RS29845 PF00111 2Fe-2S iron-sulfur cluster binding domain JHW28_RS29845 PF00175 Oxidoreductase NAD-binding domain JHW28_RS29850 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JHW28_RS29855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHW28_RS29855 PF07497 Rho termination factor, RNA-binding domain JHW28_RS29855 PF07498 Rho termination factor, N-terminal domain JHW28_RS29860 PF00085 Thioredoxin JHW28_RS29865 PF07729 FCD domain JHW28_RS29865 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS29870 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS29875 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29880 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS29885 PF00005 ABC transporter JHW28_RS29890 PF02541 Ppx/GppA phosphatase family JHW28_RS29895 PF13090 Polyphosphate kinase C-terminal domain 2 JHW28_RS29895 PF02503 Polyphosphate kinase middle domain JHW28_RS29895 PF13089 Polyphosphate kinase N-terminal domain JHW28_RS29895 PF17941 Polyphosphate kinase C-terminal domain 1 JHW28_RS29900 PF00490 Delta-aminolevulinic acid dehydratase JHW28_RS29905 PF09335 SNARE associated Golgi protein JHW28_RS29910 PF04116 Fatty acid hydroxylase superfamily JHW28_RS29920 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JHW28_RS29925 PF03239 Iron permease FTR1 family JHW28_RS29930 PF01810 LysE type translocator JHW28_RS29940 PF12848 ABC transporter JHW28_RS29940 PF00005 ABC transporter JHW28_RS29955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHW28_RS29955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHW28_RS29960 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JHW28_RS29965 PF02600 Disulfide bond formation protein DsbB JHW28_RS29980 PF02602 Uroporphyrinogen-III synthase HemD JHW28_RS29985 PF03900 Porphobilinogen deaminase, C-terminal domain JHW28_RS29985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JHW28_RS29990 PF00072 Response regulator receiver domain JHW28_RS29990 PF04397 LytTr DNA-binding domain JHW28_RS29995 PF00206 Lyase JHW28_RS29995 PF14698 Argininosuccinate lyase C-terminal JHW28_RS30000 PF13417 Glutathione S-transferase, N-terminal domain JHW28_RS30000 PF14497 Glutathione S-transferase, C-terminal domain JHW28_RS30015 PF12633 Adenylate cyclase NT domain JHW28_RS30015 PF01295 Adenylate cyclase, class-I JHW28_RS30020 PF01272 Transcription elongation factor, GreA/GreB, C-term JHW28_RS30020 PF14760 Rnk N-terminus JHW28_RS30030 PF01491 Frataxin-like domain JHW28_RS30035 PF13627 Prokaryotic lipoprotein-attachment site JHW28_RS30040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHW28_RS30040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHW28_RS30045 PF01678 Diaminopimelate epimerase JHW28_RS30055 PF00589 Phage integrase family JHW28_RS30055 PF02899 Phage integrase, N-terminal SAM-like domain JHW28_RS30060 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS30070 PF01894 Uncharacterised protein family UPF0047 JHW28_RS30075 PF00909 Ammonium Transporter Family JHW28_RS30080 PF00543 Nitrogen regulatory protein P-II JHW28_RS30085 PF04380 Membrane fusogenic activity JHW28_RS30105 PF00551 Formyl transferase JHW28_RS30105 PF02911 Formyl transferase, C-terminal domain JHW28_RS30110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JHW28_RS30110 PF00391 PEP-utilising enzyme, mobile domain JHW28_RS30115 PF00117 Glutamine amidotransferase class-I JHW28_RS30120 PF00483 Nucleotidyl transferase JHW28_RS30125 PF13335 Magnesium chelatase, subunit ChlI C-terminal JHW28_RS30125 PF01078 Magnesium chelatase, subunit ChlI JHW28_RS30150 PF12729 Four helix bundle sensory module for signal transduction JHW28_RS30150 PF00672 HAMP domain JHW28_RS30150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHW28_RS30155 PF03466 LysR substrate binding domain JHW28_RS30155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS30160 PF01554 MatE JHW28_RS30165 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS30165 PF00563 EAL domain JHW28_RS30165 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS30170 PF00580 UvrD/REP helicase N-terminal domain JHW28_RS30170 PF13361 UvrD-like helicase C-terminal domain JHW28_RS30180 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JHW28_RS30180 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JHW28_RS30185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHW28_RS30195 PF01168 Alanine racemase, N-terminal domain JHW28_RS30195 PF00842 Alanine racemase, C-terminal domain JHW28_RS30200 PF01042 Endoribonuclease L-PSP JHW28_RS30205 PF01266 FAD dependent oxidoreductase JHW28_RS30210 PF01037 Lrp/AsnC ligand binding domain JHW28_RS30220 PF01266 FAD dependent oxidoreductase JHW28_RS30230 PF00155 Aminotransferase class I and II JHW28_RS30230 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS30235 PF13091 PLD-like domain JHW28_RS30245 PF00171 Aldehyde dehydrogenase family JHW28_RS30255 PF00471 Ribosomal protein L33 JHW28_RS30260 PF00830 Ribosomal L28 family JHW28_RS30265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHW28_RS30270 PF04002 RadC-like JAB domain JHW28_RS30275 PF02441 Flavoprotein JHW28_RS30275 PF04127 DNA / pantothenate metabolism flavoprotein JHW28_RS30280 PF00692 dUTPase JHW28_RS30285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHW28_RS30285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHW28_RS30285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHW28_RS30285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHW28_RS30290 PF00696 Amino acid kinase family JHW28_RS30295 PF00156 Phosphoribosyl transferase domain JHW28_RS30300 PF03372 Endonuclease/Exonuclease/phosphatase family JHW28_RS30310 PF01138 3' exoribonuclease family, domain 1 JHW28_RS30310 PF03725 3' exoribonuclease family, domain 2 JHW28_RS30315 PF08340 Domain of unknown function (DUF1732) JHW28_RS30315 PF03755 YicC-like family, N-terminal region JHW28_RS30320 PF00625 Guanylate kinase JHW28_RS30325 PF01192 RNA polymerase Rpb6 JHW28_RS30330 PF04607 Region found in RelA / SpoT proteins JHW28_RS30330 PF02824 TGS domain JHW28_RS30330 PF13291 ACT domain JHW28_RS30335 PF01042 Endoribonuclease L-PSP JHW28_RS30350 PF01618 MotA/TolQ/ExbB proton channel family JHW28_RS30355 PF02472 Biopolymer transport protein ExbD/TolR JHW28_RS30360 PF03544 Gram-negative bacterial TonB protein C-terminal JHW28_RS30365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS30365 PF03466 LysR substrate binding domain JHW28_RS30370 PF17191 RecG wedge domain JHW28_RS30370 PF00271 Helicase conserved C-terminal domain JHW28_RS30370 PF00270 DEAD/DEAH box helicase JHW28_RS30430 PF04717 Type VI secretion system, phage-baseplate injector JHW28_RS30435 PF00069 Protein kinase domain JHW28_RS30445 PF06744 Type VI secretion protein IcmF C-terminal JHW28_RS30445 PF14331 ImcF-related N-terminal domain JHW28_RS30445 PF06761 Intracellular multiplication and human macrophage-killing JHW28_RS30455 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHW28_RS30475 PF02954 Bacterial regulatory protein, Fis family JHW28_RS30475 PF00072 Response regulator receiver domain JHW28_RS30475 PF00158 Sigma-54 interaction domain JHW28_RS30480 PF17871 AAA lid domain JHW28_RS30480 PF10431 C-terminal, D2-small domain, of ClpB protein JHW28_RS30480 PF00004 ATPase family associated with various cellular activities (AAA) JHW28_RS30480 PF07724 AAA domain (Cdc48 subfamily) JHW28_RS30490 PF05947 Type VI secretion system, TssF JHW28_RS30525 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHW28_RS30540 PF00216 Bacterial DNA-binding protein JHW28_RS30545 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS30545 PF18113 Rubredoxin binding C-terminal domain JHW28_RS30550 PF00301 Rubredoxin JHW28_RS30555 PF04345 Chorismate lyase JHW28_RS30560 PF01040 UbiA prenyltransferase family JHW28_RS30570 PF00486 Transcriptional regulatory protein, C terminal JHW28_RS30570 PF00072 Response regulator receiver domain JHW28_RS30575 PF00989 PAS fold JHW28_RS30575 PF11808 Phosphate regulon sensor protein PhoR JHW28_RS30575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHW28_RS30575 PF00512 His Kinase A (phospho-acceptor) domain JHW28_RS30580 PF00571 CBS domain JHW28_RS30580 PF03471 Transporter associated domain JHW28_RS30580 PF01595 Cyclin M transmembrane N-terminal domain JHW28_RS30585 PF01551 Peptidase family M23 JHW28_RS30585 PF01476 LysM domain JHW28_RS30585 PF08525 Opacity-associated protein A N-terminal motif JHW28_RS30600 PF00072 Response regulator receiver domain JHW28_RS30605 PF01895 PhoU domain JHW28_RS30610 PF00005 ABC transporter JHW28_RS30615 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS30620 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS30625 PF12849 PBP superfamily domain JHW28_RS30630 PF07690 Major Facilitator Superfamily JHW28_RS30635 PF03061 Thioesterase superfamily JHW28_RS30655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JHW28_RS30655 PF02222 ATP-grasp domain JHW28_RS30660 PF00731 AIR carboxylase JHW28_RS30665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS30665 PF03466 LysR substrate binding domain JHW28_RS30670 PF10415 Fumarase C C-terminus JHW28_RS30670 PF00206 Lyase JHW28_RS30685 PF01235 Sodium:alanine symporter family JHW28_RS30690 PF00710 Asparaginase, N-terminal JHW28_RS30690 PF17763 Glutaminase/Asparaginase C-terminal domain JHW28_RS30695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHW28_RS30695 PF12833 Helix-turn-helix domain JHW28_RS30705 PF00850 Histone deacetylase domain JHW28_RS30710 PF13416 Bacterial extracellular solute-binding protein JHW28_RS30715 PF04143 Sulphur transport JHW28_RS30720 PF00155 Aminotransferase class I and II JHW28_RS30720 PF00392 Bacterial regulatory proteins, gntR family JHW28_RS30745 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHW28_RS30750 PF00528 Binding-protein-dependent transport system inner membrane component JHW28_RS30765 PF00364 Biotin-requiring enzyme JHW28_RS30765 PF00682 HMGL-like JHW28_RS30765 PF02436 Conserved carboxylase domain JHW28_RS30770 PF00289 Biotin carboxylase, N-terminal domain JHW28_RS30770 PF02785 Biotin carboxylase C-terminal domain JHW28_RS30770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHW28_RS30775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS30775 PF03466 LysR substrate binding domain JHW28_RS30785 PF01380 SIS domain JHW28_RS30785 PF01418 Helix-turn-helix domain, rpiR family JHW28_RS30790 PF00563 EAL domain JHW28_RS30790 PF00990 Diguanylate cyclase, GGDEF domain JHW28_RS30790 PF03707 Bacterial signalling protein N terminal repeat JHW28_RS30795 PF00580 UvrD/REP helicase N-terminal domain JHW28_RS30795 PF13361 UvrD-like helicase C-terminal domain JHW28_RS30815 PF02254 TrkA-N domain JHW28_RS30815 PF00999 Sodium/hydrogen exchanger family JHW28_RS30820 PF03061 Thioesterase superfamily JHW28_RS30825 PF08543 Phosphomethylpyrimidine kinase JHW28_RS30835 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS30835 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHW28_RS30845 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHW28_RS30845 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHW28_RS30860 PF11741 AMIN domain JHW28_RS30860 PF01520 N-acetylmuramoyl-L-alanine amidase JHW28_RS30865 PF02649 Type I GTP cyclohydrolase folE2 JHW28_RS30870 PF00005 ABC transporter JHW28_RS30875 PF00950 ABC 3 transport family JHW28_RS30880 PF01297 Zinc-uptake complex component A periplasmic JHW28_RS30885 PF01502 Phosphoribosyl-AMP cyclohydrolase JHW28_RS30895 PF01979 Amidohydrolase family JHW28_RS30900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHW28_RS30900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHW28_RS30900 PF03129 Anticodon binding domain JHW28_RS30900 PF02824 TGS domain JHW28_RS30905 PF12276 Protein of unknown function (DUF3617) JHW28_RS30910 PF13091 PLD-like domain JHW28_RS30910 PF13396 Phospholipase_D-nuclease N-terminal JHW28_RS30920 PF00403 Heavy-metal-associated domain JHW28_RS30940 PF01066 CDP-alcohol phosphatidyltransferase JHW28_RS30945 PF12146 Serine aminopeptidase, S33 JHW28_RS30945 PF12147 Putative methyltransferase JHW28_RS30950 PF00782 Dual specificity phosphatase, catalytic domain JHW28_RS30970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHW28_RS30970 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHW28_RS30975 PF01037 Lrp/AsnC ligand binding domain JHW28_RS30980 PF01810 LysE type translocator JHW28_RS30985 PF08241 Methyltransferase domain JHW28_RS30990 PF01757 Acyltransferase family JHW28_RS31010 PF16363 GDP-mannose 4,6 dehydratase JHW28_RS31015 PF16363 GDP-mannose 4,6 dehydratase JHW28_RS31020 PF01050 Mannose-6-phosphate isomerase JHW28_RS31020 PF00483 Nucleotidyl transferase JHW28_RS31030 PF14524 Wzt C-terminal domain JHW28_RS31030 PF00005 ABC transporter JHW28_RS31040 PF13439 Glycosyltransferase Family 4 JHW28_RS31040 PF00534 Glycosyl transferases group 1 JHW28_RS31045 PF00534 Glycosyl transferases group 1 JHW28_RS31045 PF13439 Glycosyltransferase Family 4 JHW28_RS31055 PF02798 Glutathione S-transferase, N-terminal domain JHW28_RS31060 PF03466 LysR substrate binding domain JHW28_RS31060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHW28_RS31065 PF13419 Haloacid dehalogenase-like hydrolase JHW28_RS31080 PF00293 NUDIX domain JHW28_RS31085 PF01048 Phosphorylase superfamily JHW28_RS31105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS31110 PF00293 NUDIX domain JHW28_RS31115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHW28_RS31125 PF01380 SIS domain JHW28_RS31130 PF08220 DeoR-like helix-turn-helix domain JHW28_RS31130 PF00455 DeoR C terminal sensor domain JHW28_RS31135 PF14602 Hexapeptide repeat of succinyl-transferase JHW28_RS31135 PF00132 Bacterial transferase hexapeptide (six repeats) JHW28_RS31135 PF12804 MobA-like NTP transferase domain JHW28_RS31140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JHW28_RS31140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JHW28_RS31145 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHW28_RS31145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHW28_RS31150 PF00231 ATP synthase JHW28_RS31155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHW28_RS31155 PF00306 ATP synthase alpha/beta chain, C terminal domain JHW28_RS31155 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHW28_RS31160 PF00213 ATP synthase delta (OSCP) subunit JHW28_RS31165 PF00430 ATP synthase B/B' CF(0) JHW28_RS31170 PF00137 ATP synthase subunit C JHW28_RS31175 PF00119 ATP synthase A chain JHW28_RS31180 PF03899 ATP synthase I chain JHW28_RS31185 PF17762 HTH domain found in ParB protein JHW28_RS31185 PF02195 ParB-like nuclease domain JHW28_RS31190 PF13614 AAA domain JHW28_RS31195 PF02527 rRNA small subunit methyltransferase G JHW28_RS31200 PF13932 GidA associated domain JHW28_RS31200 PF01134 Glucose inhibited division protein A JHW28_RS31205 PF10396 GTP-binding protein TrmE N-terminus JHW28_RS31205 PF12631 MnmE helical domain JHW28_RS31205 PF01926 50S ribosome-binding GTPase JHW28_RS31210 PF02096 60Kd inner membrane protein JHW28_RS31210 PF14849 YidC periplasmic domain JHW28_RS31215 PF01809 Putative membrane protein insertion efficiency factor JHW28_RS31220 PF00825 Ribonuclease P JHW28_RS31225 PF00468 Ribosomal protein L34