locus-tag class description LK03_RS00025 PF00551 Formyl transferase LK03_RS00055 PF00271 Helicase conserved C-terminal domain LK03_RS00055 PF00270 DEAD/DEAH box helicase LK03_RS00060 PF00924 Mechanosensitive ion channel LK03_RS00080 PF00472 RF-1 domain LK03_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00085 PF03466 LysR substrate binding domain LK03_RS00090 PF02515 CoA-transferase family III LK03_RS00095 PF00682 HMGL-like LK03_RS00100 PF07690 Major Facilitator Superfamily LK03_RS00110 PF05532 CsbD-like LK03_RS00120 PF11954 Domain of unknown function (DUF3471) LK03_RS00120 PF00144 Beta-lactamase LK03_RS00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00125 PF03466 LysR substrate binding domain LK03_RS00140 PF00698 Acyl transferase domain LK03_RS00145 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG LK03_RS00155 PF01039 Carboxyl transferase domain LK03_RS00160 PF06857 Malonate decarboxylase delta subunit (MdcD) LK03_RS00165 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LK03_RS00170 PF16957 Malonate decarboxylase, alpha subunit, transporter LK03_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00180 PF03466 LysR substrate binding domain LK03_RS00185 PF03600 Citrate transporter LK03_RS00205 PF05190 MutS family domain IV LK03_RS00205 PF05192 MutS domain III LK03_RS00205 PF05188 MutS domain II LK03_RS00205 PF00488 MutS domain V LK03_RS00205 PF01624 MutS domain I LK03_RS00220 PF00155 Aminotransferase class I and II LK03_RS00230 PF03472 Autoinducer binding domain LK03_RS00230 PF00196 Bacterial regulatory proteins, luxR family LK03_RS00235 PF00765 Autoinducer synthase LK03_RS00245 PF01042 Endoribonuclease L-PSP LK03_RS00255 PF01546 Peptidase family M20/M25/M40 LK03_RS00255 PF07687 Peptidase dimerisation domain LK03_RS00260 PF03466 LysR substrate binding domain LK03_RS00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00275 PF00892 EamA-like transporter family LK03_RS00280 PF02525 Flavodoxin-like fold LK03_RS00295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LK03_RS00300 PF00664 ABC transporter transmembrane region LK03_RS00300 PF00005 ABC transporter LK03_RS00315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK03_RS00315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK03_RS00320 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LK03_RS00320 PF00271 Helicase conserved C-terminal domain LK03_RS00320 PF00270 DEAD/DEAH box helicase LK03_RS00320 PF04408 Helicase associated domain (HA2) LK03_RS00320 PF11898 Domain of unknown function (DUF3418) LK03_RS00325 PF13193 AMP-binding enzyme C-terminal domain LK03_RS00325 PF00501 AMP-binding enzyme LK03_RS00330 PF13193 AMP-binding enzyme C-terminal domain LK03_RS00330 PF00501 AMP-binding enzyme LK03_RS00335 PF01575 MaoC like domain LK03_RS00345 PF02867 Ribonucleotide reductase, barrel domain LK03_RS00345 PF00317 Ribonucleotide reductase, all-alpha domain LK03_RS00345 PF03477 ATP cone domain LK03_RS00350 PF00268 Ribonucleotide reductase, small chain LK03_RS00355 PF04229 GrpB protein LK03_RS00355 PF13673 Acetyltransferase (GNAT) domain LK03_RS00370 PF02525 Flavodoxin-like fold LK03_RS00375 PF13411 MerR HTH family regulatory protein LK03_RS00385 PF03788 LrgA family LK03_RS00390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00390 PF03466 LysR substrate binding domain LK03_RS00395 PF00375 Sodium:dicarboxylate symporter family LK03_RS00400 PF00206 Lyase LK03_RS00400 PF10397 Adenylosuccinate lyase C-terminus LK03_RS00405 PF00392 Bacterial regulatory proteins, gntR family LK03_RS00405 PF07702 UTRA domain LK03_RS00420 PF02810 SEC-C motif LK03_RS00420 PF03695 Uncharacterised protein family (UPF0149) LK03_RS00425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS00425 PF00205 Thiamine pyrophosphate enzyme, central domain LK03_RS00425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS00455 PF01226 Formate/nitrite transporter LK03_RS00460 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS00460 PF05230 MASE2 domain LK03_RS00485 PF12137 RNA polymerase recycling family C-terminal LK03_RS00485 PF00271 Helicase conserved C-terminal domain LK03_RS00485 PF00176 SNF2 family N-terminal domain LK03_RS00485 PF18339 RapA N-terminal Tudor like domain 1 LK03_RS00485 PF18337 RapA N-terminal Tudor like domain LK03_RS00490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK03_RS00490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK03_RS00500 PF13458 Periplasmic binding protein LK03_RS00505 PF02653 Branched-chain amino acid transport system / permease component LK03_RS00510 PF02653 Branched-chain amino acid transport system / permease component LK03_RS00510 PF11862 Domain of unknown function (DUF3382) LK03_RS00515 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK03_RS00515 PF00005 ABC transporter LK03_RS00520 PF00005 ABC transporter LK03_RS00540 PF01243 Pyridoxamine 5'-phosphate oxidase LK03_RS00540 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LK03_RS00545 PF00691 OmpA family LK03_RS00545 PF00223 Photosystem I psaA/psaB protein LK03_RS00555 PF02449 Beta-galactosidase LK03_RS00555 PF17992 Agarase CBM like domain LK03_RS00560 PF06733 DEAD_2 LK03_RS00560 PF13307 Helicase C-terminal domain LK03_RS00575 PF00691 OmpA family LK03_RS00575 PF05736 OprF membrane domain LK03_RS00585 PF02810 SEC-C motif LK03_RS00605 PF01804 Penicillin amidase LK03_RS00610 PF01068 ATP dependent DNA ligase domain LK03_RS00610 PF04675 DNA ligase N terminus LK03_RS00610 PF04679 ATP dependent DNA ligase C terminal region LK03_RS00615 PF04679 ATP dependent DNA ligase C terminal region LK03_RS00615 PF01068 ATP dependent DNA ligase domain LK03_RS00615 PF04675 DNA ligase N terminus LK03_RS00625 PF00270 DEAD/DEAH box helicase LK03_RS00625 PF08494 DEAD/H associated LK03_RS00625 PF00271 Helicase conserved C-terminal domain LK03_RS00640 PF00692 dUTPase LK03_RS00645 PF00313 'Cold-shock' DNA-binding domain LK03_RS00650 PF10609 NUBPL iron-transfer P-loop NTPase LK03_RS00655 PF01588 Putative tRNA binding domain LK03_RS00655 PF09334 tRNA synthetases class I (M) LK03_RS00660 PF10576 Iron-sulfur binding domain of endonuclease III LK03_RS00660 PF00633 Helix-hairpin-helix motif LK03_RS00660 PF00730 HhH-GPD superfamily base excision DNA repair protein LK03_RS00670 PF00072 Response regulator receiver domain LK03_RS00670 PF00196 Bacterial regulatory proteins, luxR family LK03_RS00680 PF00764 Arginosuccinate synthase LK03_RS00690 PF01979 Amidohydrolase family LK03_RS00695 PF00929 Exonuclease LK03_RS00700 PF10417 C-terminal domain of 1-Cys peroxiredoxin LK03_RS00700 PF00578 AhpC/TSA family LK03_RS00705 PF04324 BFD-like [2Fe-2S] binding domain LK03_RS00710 PF00210 Ferritin-like domain LK03_RS00715 PF00462 Glutaredoxin LK03_RS00720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK03_RS00720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK03_RS00725 PF00005 ABC transporter LK03_RS00725 PF08402 TOBE domain LK03_RS00730 PF04073 Aminoacyl-tRNA editing domain LK03_RS00735 PF00230 Major intrinsic protein LK03_RS00740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LK03_RS00740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LK03_RS00745 PF00455 DeoR C terminal sensor domain LK03_RS00745 PF08220 DeoR-like helix-turn-helix domain LK03_RS00750 PF01266 FAD dependent oxidoreductase LK03_RS00750 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LK03_RS00755 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS00760 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS00770 PF00005 ABC transporter LK03_RS00775 PF02743 Cache domain LK03_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS00775 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS00780 PF00072 Response regulator receiver domain LK03_RS00780 PF02954 Bacterial regulatory protein, Fis family LK03_RS00780 PF00158 Sigma-54 interaction domain LK03_RS00785 PF00561 alpha/beta hydrolase fold LK03_RS00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS00790 PF03466 LysR substrate binding domain LK03_RS00795 PF00293 NUDIX domain LK03_RS00800 PF01197 Ribosomal protein L31 LK03_RS00810 PF03551 Transcriptional regulator PadR-like family LK03_RS00815 PF04954 Siderophore-interacting protein LK03_RS00815 PF08021 Siderophore-interacting FAD-binding domain LK03_RS00825 PF09905 DNA-binding protein VF530 LK03_RS00830 PF07715 TonB-dependent Receptor Plug Domain LK03_RS00830 PF00593 TonB dependent receptor LK03_RS00835 PF04966 Carbohydrate-selective porin, OprB family LK03_RS00840 PF01011 PQQ enzyme repeat LK03_RS00845 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS00845 PF05362 Lon protease (S16) C-terminal proteolytic domain LK03_RS00845 PF02190 ATP-dependent protease La (LON) substrate-binding domain LK03_RS00860 PF13649 Methyltransferase domain LK03_RS00865 PF08003 Protein of unknown function (DUF1698) LK03_RS00870 PF04445 Putative SAM-dependent methyltransferase LK03_RS00890 PF01904 Protein of unknown function DUF72 LK03_RS00900 PF00814 Glycoprotease family LK03_RS00905 PF05191 Adenylate kinase, active site lid LK03_RS00910 PF00311 Phosphoenolpyruvate carboxylase LK03_RS00925 PF00691 OmpA family LK03_RS00925 PF13488 Glycine zipper LK03_RS00940 PF12146 Serine aminopeptidase, S33 LK03_RS00960 PF01336 OB-fold nucleic acid binding domain LK03_RS00960 PF00152 tRNA synthetases class II (D, K and N) LK03_RS00965 PF03462 PCRF domain LK03_RS00965 PF00472 RF-1 domain LK03_RS00970 PF01590 GAF domain LK03_RS00970 PF00563 EAL domain LK03_RS00970 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS00970 PF00360 Phytochrome region LK03_RS00975 PF00072 Response regulator receiver domain LK03_RS00975 PF01339 CheB methylesterase LK03_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS00980 PF00072 Response regulator receiver domain LK03_RS00980 PF01627 Hpt domain LK03_RS00980 PF01584 CheW-like domain LK03_RS00990 PF01739 CheR methyltransferase, SAM binding domain LK03_RS01000 PF02743 Cache domain LK03_RS01000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS01000 PF00672 HAMP domain LK03_RS01010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK03_RS01020 PF07152 YaeQ protein LK03_RS01035 PF14821 Threonine synthase N terminus LK03_RS01035 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS01040 PF00742 Homoserine dehydrogenase LK03_RS01040 PF03447 Homoserine dehydrogenase, NAD binding domain LK03_RS01040 PF01842 ACT domain LK03_RS01045 PF10411 Disulfide bond isomerase protein N-terminus LK03_RS01045 PF13098 Thioredoxin-like domain LK03_RS01050 PF02899 Phage integrase, N-terminal SAM-like domain LK03_RS01050 PF00589 Phage integrase family LK03_RS01055 PF03061 Thioesterase superfamily LK03_RS01060 PF01245 Ribosomal protein L19 LK03_RS01065 PF01746 tRNA (Guanine-1)-methyltransferase LK03_RS01070 PF05239 PRC-barrel domain LK03_RS01070 PF01782 RimM N-terminal domain LK03_RS01075 PF00886 Ribosomal protein S16 LK03_RS01080 PF00448 SRP54-type protein, GTPase domain LK03_RS01080 PF02881 SRP54-type protein, helical bundle domain LK03_RS01080 PF02978 Signal peptide binding domain LK03_RS01090 PF00571 CBS domain LK03_RS01090 PF01595 Cyclin M transmembrane N-terminal domain LK03_RS01090 PF03471 Transporter associated domain LK03_RS01100 PF01370 NAD dependent epimerase/dehydratase family LK03_RS01100 PF02222 ATP-grasp domain LK03_RS01115 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS01120 PF00293 NUDIX domain LK03_RS01125 PF00293 NUDIX domain LK03_RS01125 PF09297 NADH pyrophosphatase zinc ribbon domain LK03_RS01130 PF03734 L,D-transpeptidase catalytic domain LK03_RS01135 PF08479 POTRA domain, ShlB-type LK03_RS01135 PF17287 POTRA domain LK03_RS01135 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LK03_RS01140 PF05860 haemagglutination activity domain LK03_RS01140 PF13332 Hemagglutinin repeat LK03_RS01155 PF00425 chorismate binding enzyme LK03_RS01155 PF04715 Anthranilate synthase component I, N terminal region LK03_RS01160 PF00117 Glutamine amidotransferase class-I LK03_RS01165 PF01810 LysE type translocator LK03_RS01170 PF01784 NIF3 (NGG1p interacting factor 3) LK03_RS01175 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LK03_RS01175 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LK03_RS01175 PF02769 AIR synthase related protein, C-terminal domain LK03_RS01180 PF01464 Transglycosylase SLT domain LK03_RS01180 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS01185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK03_RS01190 PF07732 Multicopper oxidase LK03_RS01190 PF07731 Multicopper oxidase LK03_RS01190 PF00394 Multicopper oxidase LK03_RS01195 PF03551 Transcriptional regulator PadR-like family LK03_RS01195 PF13847 Methyltransferase domain LK03_RS01200 PF06594 Haemolysin-type calcium binding protein related domain LK03_RS01200 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LK03_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS01215 PF03466 LysR substrate binding domain LK03_RS01225 PF07690 Major Facilitator Superfamily LK03_RS01230 PF00440 Bacterial regulatory proteins, tetR family LK03_RS01230 PF08361 MAATS-type transcriptional repressor, C-terminal region LK03_RS01235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS01235 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS01240 PF00873 AcrB/AcrD/AcrF family LK03_RS01245 PF02321 Outer membrane efflux protein LK03_RS01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS01250 PF03466 LysR substrate binding domain LK03_RS01255 PF12146 Serine aminopeptidase, S33 LK03_RS01260 PF00083 Sugar (and other) transporter LK03_RS01265 PF02803 Thiolase, C-terminal domain LK03_RS01265 PF00108 Thiolase, N-terminal domain LK03_RS01270 PF01144 Coenzyme A transferase LK03_RS01275 PF01144 Coenzyme A transferase LK03_RS01280 PF09339 IclR helix-turn-helix domain LK03_RS01280 PF01614 Bacterial transcriptional regulator LK03_RS01290 PF01384 Phosphate transporter family LK03_RS01295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS01295 PF00672 HAMP domain LK03_RS01295 PF02743 Cache domain LK03_RS01300 PF13439 Glycosyltransferase Family 4 LK03_RS01300 PF00534 Glycosyl transferases group 1 LK03_RS01315 PF00551 Formyl transferase LK03_RS01325 PF00929 Exonuclease LK03_RS01325 PF08411 Exonuclease C-terminal LK03_RS01340 PF00224 Pyruvate kinase, barrel domain LK03_RS01340 PF02887 Pyruvate kinase, alpha/beta domain LK03_RS01345 PF00970 Oxidoreductase FAD-binding domain LK03_RS01345 PF00175 Oxidoreductase NAD-binding domain LK03_RS01350 PF05683 Fumarase C-terminus LK03_RS01350 PF05681 Fumarate hydratase (Fumerase) LK03_RS01375 PF00583 Acetyltransferase (GNAT) family LK03_RS01375 PF00795 Carbon-nitrogen hydrolase LK03_RS01390 PF13091 PLD-like domain LK03_RS01430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK03_RS01440 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LK03_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS01445 PF03466 LysR substrate binding domain LK03_RS01450 PF01810 LysE type translocator LK03_RS01455 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK03_RS01455 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK03_RS01460 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS01460 PF03707 Bacterial signalling protein N terminal repeat LK03_RS01460 PF00563 EAL domain LK03_RS01485 PF08264 Anticodon-binding domain of tRNA LK03_RS01485 PF10458 Valyl tRNA synthetase tRNA binding arm LK03_RS01485 PF00133 tRNA synthetases class I (I, L, M and V) LK03_RS01490 PF05971 RNA methyltransferase LK03_RS01495 PF00216 Bacterial DNA-binding protein LK03_RS01500 PF04245 37-kD nucleoid-associated bacterial protein LK03_RS01505 PF01541 GIY-YIG catalytic domain LK03_RS01515 PF07690 Major Facilitator Superfamily LK03_RS01520 PF00392 Bacterial regulatory proteins, gntR family LK03_RS01520 PF07729 FCD domain LK03_RS01525 PF00155 Aminotransferase class I and II LK03_RS01530 PF00815 Histidinol dehydrogenase LK03_RS01535 PF01634 ATP phosphoribosyltransferase LK03_RS01540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK03_RS01555 PF05494 MlaC protein LK03_RS01560 PF02470 MlaD protein LK03_RS01565 PF02405 Permease MlaE LK03_RS01570 PF00005 ABC transporter LK03_RS01575 PF00571 CBS domain LK03_RS01575 PF01380 SIS domain LK03_RS01585 PF03968 OstA-like protein LK03_RS01590 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK03_RS01590 PF00005 ABC transporter LK03_RS01595 PF00309 Sigma-54 factor, Activator interacting domain (AID) LK03_RS01595 PF04963 Sigma-54 factor, core binding domain LK03_RS01595 PF04552 Sigma-54, DNA binding domain LK03_RS01600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LK03_RS01605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK03_RS01610 PF03668 P-loop ATPase protein family LK03_RS01615 PF00381 PTS HPr component phosphorylation site LK03_RS01620 PF02535 ZIP Zinc transporter LK03_RS01625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LK03_RS01625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LK03_RS01635 PF00206 Lyase LK03_RS01635 PF10415 Fumarase C C-terminus LK03_RS01660 PF01523 Putative modulator of DNA gyrase LK03_RS01665 PF04751 Protein of unknown function (DUF615) LK03_RS01670 PF01523 Putative modulator of DNA gyrase LK03_RS01675 PF00795 Carbon-nitrogen hydrolase LK03_RS01685 PF10150 Ribonuclease E/G family LK03_RS01685 PF00575 S1 RNA binding domain LK03_RS01690 PF02545 Maf-like protein LK03_RS01695 PF04093 rod shape-determining protein MreD LK03_RS01700 PF04085 rod shape-determining protein MreC LK03_RS01710 PF02686 Glu-tRNAGln amidotransferase C subunit LK03_RS01715 PF01425 Amidase LK03_RS01720 PF02934 GatB/GatE catalytic domain LK03_RS01720 PF02637 GatB domain LK03_RS01725 PF03330 Lytic transglycolase LK03_RS01730 PF01699 Sodium/calcium exchanger protein LK03_RS01735 PF00324 Amino acid permease LK03_RS01745 PF00072 Response regulator receiver domain LK03_RS01745 PF02954 Bacterial regulatory protein, Fis family LK03_RS01750 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS01760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS01765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS01770 PF03573 outer membrane porin, OprD family LK03_RS01775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS01785 PF12911 N-terminal TM domain of oligopeptide transport permease C LK03_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS01790 PF00005 ABC transporter LK03_RS01790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK03_RS01795 PF00005 ABC transporter LK03_RS01795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK03_RS01810 PF03144 Elongation factor Tu domain 2 LK03_RS01810 PF16658 Class II release factor RF3, C-terminal domain LK03_RS01810 PF00009 Elongation factor Tu GTP binding domain LK03_RS01815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK03_RS01815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LK03_RS01820 PF00175 Oxidoreductase NAD-binding domain LK03_RS01820 PF00667 FAD binding domain LK03_RS01820 PF00258 Flavodoxin LK03_RS01825 PF00795 Carbon-nitrogen hydrolase LK03_RS01830 PF00155 Aminotransferase class I and II LK03_RS01835 PF01926 50S ribosome-binding GTPase LK03_RS01835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LK03_RS01840 PF13360 PQQ-like domain LK03_RS01850 PF13393 Histidyl-tRNA synthetase LK03_RS01850 PF03129 Anticodon binding domain LK03_RS01855 PF04551 GcpE protein LK03_RS01870 PF04055 Radical SAM superfamily LK03_RS01875 PF00334 Nucleoside diphosphate kinase LK03_RS01880 PF04384 Iron-sulphur cluster assembly LK03_RS01885 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS01890 PF00012 Hsp70 protein LK03_RS01895 PF00226 DnaJ domain LK03_RS01895 PF07743 HSCB C-terminal oligomerisation domain LK03_RS01900 PF01521 Iron-sulphur cluster biosynthesis LK03_RS01905 PF01592 NifU-like N terminal domain LK03_RS01910 PF00266 Aminotransferase class-V LK03_RS01915 PF02082 Transcriptional regulator LK03_RS01920 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS01920 PF06426 Serine acetyltransferase, N-terminal LK03_RS01925 PF00588 SpoU rRNA Methylase family LK03_RS01930 PF00459 Inositol monophosphatase family LK03_RS01935 PF05433 Glycine zipper 2TM domain LK03_RS01940 PF07549 SecD/SecF GG Motif LK03_RS01940 PF02355 Protein export membrane protein LK03_RS01945 PF02355 Protein export membrane protein LK03_RS01945 PF07549 SecD/SecF GG Motif LK03_RS01945 PF13721 SecD export protein N-terminal TM region LK03_RS01950 PF02699 Preprotein translocase subunit LK03_RS01955 PF01702 Queuine tRNA-ribosyltransferase LK03_RS01960 PF02547 Queuosine biosynthesis protein LK03_RS01975 PF01062 Bestrophin, RFP-TM, chloride channel LK03_RS01995 PF03692 Putative zinc- or iron-chelating domain LK03_RS02000 PF00155 Aminotransferase class I and II LK03_RS02005 PF01040 UbiA prenyltransferase family LK03_RS02010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LK03_RS02015 PF00510 Cytochrome c oxidase subunit III LK03_RS02020 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK03_RS02025 PF06481 COX Aromatic Rich Motif LK03_RS02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LK03_RS02030 PF02600 Disulfide bond formation protein DsbB LK03_RS02035 PF07715 TonB-dependent Receptor Plug Domain LK03_RS02035 PF00593 TonB dependent receptor LK03_RS02050 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS02055 PF00072 Response regulator receiver domain LK03_RS02055 PF00486 Transcriptional regulatory protein, C terminal LK03_RS02060 PF00106 short chain dehydrogenase LK03_RS02070 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02070 PF00501 AMP-binding enzyme LK03_RS02080 PF07715 TonB-dependent Receptor Plug Domain LK03_RS02080 PF00593 TonB dependent receptor LK03_RS02080 PF07660 Secretin and TonB N terminus short domain LK03_RS02090 PF08281 Sigma-70, region 4 LK03_RS02090 PF04542 Sigma-70 region 2 LK03_RS02095 PF00440 Bacterial regulatory proteins, tetR family LK03_RS02095 PF13977 BetI-type transcriptional repressor, C-terminal LK03_RS02100 PF07690 Major Facilitator Superfamily LK03_RS02105 PF01717 Cobalamin-independent synthase, Catalytic domain LK03_RS02105 PF08267 Cobalamin-independent synthase, N-terminal domain LK03_RS02115 PF04542 Sigma-70 region 2 LK03_RS02115 PF08281 Sigma-70, region 4 LK03_RS02120 PF04773 FecR protein LK03_RS02120 PF16220 Domain of unknown function (DUF4880) LK03_RS02125 PF00593 TonB dependent receptor LK03_RS02125 PF07715 TonB-dependent Receptor Plug Domain LK03_RS02130 PF00884 Sulfatase LK03_RS02145 PF00486 Transcriptional regulatory protein, C terminal LK03_RS02145 PF00072 Response regulator receiver domain LK03_RS02150 PF08521 Two-component sensor kinase N-terminal LK03_RS02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS02150 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS02195 PF13356 Arm DNA-binding domain LK03_RS02195 PF00589 Phage integrase family LK03_RS02205 PF07963 Prokaryotic N-terminal methylation motif LK03_RS02205 PF00114 Pilin (bacterial filament) LK03_RS02210 PF00482 Type II secretion system (T2SS), protein F LK03_RS02215 PF01478 Type IV leader peptidase family LK03_RS02215 PF06750 Bacterial Peptidase A24 N-terminal domain LK03_RS02220 PF01121 Dephospho-CoA kinase LK03_RS02225 PF03884 DNA gyrase inhibitor YacG LK03_RS02235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS02255 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS02255 PF07724 AAA domain (Cdc48 subfamily) LK03_RS02255 PF17871 AAA lid domain LK03_RS02255 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS02255 PF02861 Clp amino terminal domain, pathogenicity island component LK03_RS02260 PF02578 Multi-copper polyphenol oxidoreductase laccase LK03_RS02265 PF00849 RNA pseudouridylate synthase LK03_RS02265 PF01479 S4 domain LK03_RS02270 PF13525 Outer membrane lipoprotein LK03_RS02280 PF01266 FAD dependent oxidoreductase LK03_RS02305 PF02401 LytB protein LK03_RS02310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS02315 PF01252 Signal peptidase (SPase) II LK03_RS02320 PF06827 Zinc finger found in FPG and IleRS LK03_RS02320 PF00133 tRNA synthetases class I (I, L, M and V) LK03_RS02320 PF08264 Anticodon-binding domain of tRNA LK03_RS02325 PF06574 FAD synthetase LK03_RS02325 PF01687 Riboflavin kinase LK03_RS02330 PF03023 Lipid II flippase MurJ LK03_RS02335 PF01649 Ribosomal protein S20 LK03_RS02340 PF02470 MlaD protein LK03_RS02345 PF04403 Paraquat-inducible protein A LK03_RS02350 PF04403 Paraquat-inducible protein A LK03_RS02380 PF01794 Ferric reductase like transmembrane component LK03_RS02385 PF00174 Oxidoreductase molybdopterin binding domain LK03_RS02390 PF01066 CDP-alcohol phosphatidyltransferase LK03_RS02395 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LK03_RS02395 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LK03_RS02400 PF10369 Small subunit of acetolactate synthase LK03_RS02405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS02405 PF00205 Thiamine pyrophosphate enzyme, central domain LK03_RS02405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS02410 PF04287 tRNA pseudouridine synthase C LK03_RS02420 PF00912 Transglycosylase LK03_RS02420 PF00905 Penicillin binding protein transpeptidase domain LK03_RS02420 PF14814 Bifunctional transglycosylase second domain LK03_RS02435 PF00005 ABC transporter LK03_RS02440 PF01032 FecCD transport family LK03_RS02445 PF01497 Periplasmic binding protein LK03_RS02455 PF03749 Sugar fermentation stimulation protein RE domain LK03_RS02455 PF17746 SfsA N-terminal OB domain LK03_RS02460 PF00155 Aminotransferase class I and II LK03_RS02465 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK03_RS02470 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK03_RS02480 PF08447 PAS fold LK03_RS02480 PF00989 PAS fold LK03_RS02480 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS02480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS02485 PF00158 Sigma-54 interaction domain LK03_RS02485 PF00072 Response regulator receiver domain LK03_RS02485 PF02954 Bacterial regulatory protein, Fis family LK03_RS02490 PF12626 Polymerase A arginine-rich C-terminus LK03_RS02490 PF12627 Probable RNA and SrmB- binding site of polymerase A LK03_RS02490 PF01743 Poly A polymerase head domain LK03_RS02495 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LK03_RS02500 PF02548 Ketopantoate hydroxymethyltransferase LK03_RS02505 PF02569 Pantoate-beta-alanine ligase LK03_RS02510 PF00342 Phosphoglucose isomerase LK03_RS02515 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02515 PF00501 AMP-binding enzyme LK03_RS02515 PF16177 Acetyl-coenzyme A synthetase N-terminus LK03_RS02525 PF04972 BON domain LK03_RS02530 PF03725 3' exoribonuclease family, domain 2 LK03_RS02530 PF00013 KH domain LK03_RS02530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LK03_RS02530 PF01138 3' exoribonuclease family, domain 1 LK03_RS02530 PF00575 S1 RNA binding domain LK03_RS02535 PF00312 Ribosomal protein S15 LK03_RS02540 PF01509 TruB family pseudouridylate synthase (N terminal domain) LK03_RS02540 PF16198 tRNA pseudouridylate synthase B C-terminal domain LK03_RS02540 PF09157 Pseudouridine synthase II TruB, C-terminal LK03_RS02545 PF02033 Ribosome-binding factor A LK03_RS02550 PF08364 Bacterial translation initiation factor IF-2 associated region LK03_RS02550 PF04760 Translation initiation factor IF-2, N-terminal region LK03_RS02550 PF00009 Elongation factor Tu GTP binding domain LK03_RS02550 PF11987 Translation-initiation factor 2 LK03_RS02555 PF00575 S1 RNA binding domain LK03_RS02555 PF08529 NusA N-terminal domain LK03_RS02555 PF13184 NusA-like KH domain LK03_RS02560 PF02576 RimP N-terminal domain LK03_RS02560 PF17384 RimP C-terminal SH3 domain LK03_RS02575 PF00121 Triosephosphate isomerase LK03_RS02580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK03_RS02580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK03_RS02580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK03_RS02580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK03_RS02585 PF00809 Pterin binding enzyme LK03_RS02590 PF01434 Peptidase family M41 LK03_RS02590 PF06480 FtsH Extracellular LK03_RS02590 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS02590 PF17862 AAA+ lid domain LK03_RS02595 PF01728 FtsJ-like methyltransferase LK03_RS02600 PF01985 CRS1 / YhbY (CRM) domain LK03_RS02610 PF03449 Transcription elongation factor, N-terminal LK03_RS02610 PF01272 Transcription elongation factor, GreA/GreB, C-term LK03_RS02615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LK03_RS02615 PF02142 MGS-like domain LK03_RS02615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK03_RS02620 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LK03_RS02620 PF00117 Glutamine amidotransferase class-I LK03_RS02625 PF05173 Dihydrodipicolinate reductase, C-terminus LK03_RS02625 PF01113 Dihydrodipicolinate reductase, N-terminus LK03_RS02630 PF01556 DnaJ C terminal domain LK03_RS02630 PF00226 DnaJ domain LK03_RS02630 PF00684 DnaJ central domain LK03_RS02635 PF00012 Hsp70 protein LK03_RS02640 PF01025 GrpE LK03_RS02645 PF02463 RecF/RecN/SMC N terminal domain LK03_RS02650 PF01475 Ferric uptake regulator family LK03_RS02655 PF04355 SmpA / OmlA family LK03_RS02660 PF03364 Polyketide cyclase / dehydrase and lipid transport LK03_RS02665 PF01668 SmpB protein LK03_RS02670 PF07729 FCD domain LK03_RS02670 PF00392 Bacterial regulatory proteins, gntR family LK03_RS02675 PF02652 L-lactate permease LK03_RS02680 PF01070 FMN-dependent dehydrogenase LK03_RS02725 PF11867 Domain of unknown function (DUF3387) LK03_RS02725 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LK03_RS02725 PF18766 SWI2/SNF2 ATPase LK03_RS02735 PF01420 Type I restriction modification DNA specificity domain LK03_RS02740 PF02384 N-6 DNA Methylase LK03_RS02745 PF00271 Helicase conserved C-terminal domain LK03_RS02745 PF00176 SNF2 family N-terminal domain LK03_RS02745 PF12419 SNF2 Helicase protein LK03_RS02790 PF01926 50S ribosome-binding GTPase LK03_RS02815 PF07995 Glucose / Sorbosone dehydrogenase LK03_RS02830 PF03781 Sulfatase-modifying factor enzyme 1 LK03_RS02835 PF00005 ABC transporter LK03_RS02835 PF00664 ABC transporter transmembrane region LK03_RS02840 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02840 PF00501 AMP-binding enzyme LK03_RS02840 PF00668 Condensation domain LK03_RS02840 PF00550 Phosphopantetheine attachment site LK03_RS02845 PF00501 AMP-binding enzyme LK03_RS02845 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02845 PF00550 Phosphopantetheine attachment site LK03_RS02845 PF00668 Condensation domain LK03_RS02850 PF00501 AMP-binding enzyme LK03_RS02850 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02850 PF00668 Condensation domain LK03_RS02850 PF00550 Phosphopantetheine attachment site LK03_RS02855 PF00593 TonB dependent receptor LK03_RS02855 PF07715 TonB-dependent Receptor Plug Domain LK03_RS02855 PF07660 Secretin and TonB N terminus short domain LK03_RS02860 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS02860 PF00202 Aminotransferase class-III LK03_RS02860 PF00501 AMP-binding enzyme LK03_RS02860 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02860 PF00668 Condensation domain LK03_RS02860 PF16197 Ketoacyl-synthetase C-terminal extension LK03_RS02860 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS02860 PF00550 Phosphopantetheine attachment site LK03_RS02865 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02865 PF00501 AMP-binding enzyme LK03_RS02865 PF00550 Phosphopantetheine attachment site LK03_RS02865 PF00668 Condensation domain LK03_RS02870 PF00501 AMP-binding enzyme LK03_RS02870 PF13193 AMP-binding enzyme C-terminal domain LK03_RS02870 PF00668 Condensation domain LK03_RS02870 PF00550 Phosphopantetheine attachment site LK03_RS02875 PF00324 Amino acid permease LK03_RS02880 PF02661 Fic/DOC family LK03_RS02880 PF12728 Helix-turn-helix domain LK03_RS02890 PF12794 Mechanosensitive ion channel inner membrane domain 1 LK03_RS02890 PF12795 Mechanosensitive ion channel porin domain LK03_RS02890 PF00924 Mechanosensitive ion channel LK03_RS02895 PF00271 Helicase conserved C-terminal domain LK03_RS02895 PF00270 DEAD/DEAH box helicase LK03_RS02900 PF00892 EamA-like transporter family LK03_RS02910 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) LK03_RS02925 PF01627 Hpt domain LK03_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS02925 PF00072 Response regulator receiver domain LK03_RS02925 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS02930 PF00196 Bacterial regulatory proteins, luxR family LK03_RS02930 PF00072 Response regulator receiver domain LK03_RS02935 PF04408 Helicase associated domain (HA2) LK03_RS02935 PF00270 DEAD/DEAH box helicase LK03_RS02935 PF00271 Helicase conserved C-terminal domain LK03_RS02935 PF08482 ATP-dependent helicase C-terminal LK03_RS02950 PF07769 psiF repeat LK03_RS02965 PF05170 AsmA family LK03_RS02975 PF00440 Bacterial regulatory proteins, tetR family LK03_RS02990 PF00106 short chain dehydrogenase LK03_RS02995 PF00005 ABC transporter LK03_RS03000 PF00005 ABC transporter LK03_RS03000 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK03_RS03005 PF11862 Domain of unknown function (DUF3382) LK03_RS03005 PF02653 Branched-chain amino acid transport system / permease component LK03_RS03010 PF02653 Branched-chain amino acid transport system / permease component LK03_RS03015 PF13458 Periplasmic binding protein LK03_RS03020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LK03_RS03020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LK03_RS03025 PF02540 NAD synthase LK03_RS03030 PF00127 Copper binding proteins, plastocyanin/azurin family LK03_RS03035 PF08497 Radical SAM N-terminal LK03_RS03035 PF04055 Radical SAM superfamily LK03_RS03035 PF11842 Domain of unknown function (DUF3362) LK03_RS03050 PF00664 ABC transporter transmembrane region LK03_RS03050 PF00005 ABC transporter LK03_RS03055 PF03796 DnaB-like helicase C terminal domain LK03_RS03055 PF00772 DnaB-like helicase N terminal domain LK03_RS03060 PF01281 Ribosomal protein L9, N-terminal domain LK03_RS03060 PF03948 Ribosomal protein L9, C-terminal domain LK03_RS03070 PF01084 Ribosomal protein S18 LK03_RS03075 PF01250 Ribosomal protein S6 LK03_RS03080 PF08032 RNA 2'-O ribose methyltransferase substrate binding LK03_RS03080 PF00588 SpoU rRNA Methylase family LK03_RS03085 PF17876 Cold shock domain LK03_RS03085 PF08461 Ribonuclease R winged-helix domain LK03_RS03085 PF08206 Ribonuclease B OB domain LK03_RS03085 PF00773 RNB domain LK03_RS03085 PF00575 S1 RNA binding domain LK03_RS03120 PF00891 O-methyltransferase domain LK03_RS03130 PF01547 Bacterial extracellular solute-binding protein LK03_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS03140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS03140 PF00672 HAMP domain LK03_RS03145 PF00709 Adenylosuccinate synthetase LK03_RS03150 PF13393 Histidyl-tRNA synthetase LK03_RS03155 PF01145 SPFH domain / Band 7 family LK03_RS03160 PF01145 SPFH domain / Band 7 family LK03_RS03165 PF16360 GTP-binding GTPase Middle Region LK03_RS03165 PF13167 GTP-binding GTPase N-terminal LK03_RS03165 PF01926 50S ribosome-binding GTPase LK03_RS03170 PF17209 Hfq protein LK03_RS03180 PF08676 MutL C terminal dimerisation domain LK03_RS03180 PF01119 DNA mismatch repair protein, C-terminal domain LK03_RS03185 PF11741 AMIN domain LK03_RS03185 PF01520 N-acetylmuramoyl-L-alanine amidase LK03_RS03190 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LK03_RS03195 PF03853 YjeF-related protein N-terminus LK03_RS03195 PF01256 Carbohydrate kinase LK03_RS03200 PF08331 Domain of unknown function (DUF1730) LK03_RS03205 PF03458 UPF0126 domain LK03_RS03210 PF00929 Exonuclease LK03_RS03215 PF03193 RsgA GTPase LK03_RS03220 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK03_RS03220 PF00691 OmpA family LK03_RS03225 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS03235 PF00581 Rhodanese-like domain LK03_RS03240 PF02666 Phosphatidylserine decarboxylase LK03_RS03260 PF00521 DNA gyrase/topoisomerase IV, subunit A LK03_RS03260 PF03989 DNA gyrase C-terminal domain, beta-propeller LK03_RS03275 PF01751 Toprim domain LK03_RS03275 PF00986 DNA gyrase B subunit, carboxyl terminus LK03_RS03275 PF00204 DNA gyrase B LK03_RS03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS03280 PF05728 Uncharacterised protein family (UPF0227) LK03_RS03285 PF00149 Calcineurin-like phosphoesterase LK03_RS03295 PF00293 NUDIX domain LK03_RS03305 PF13667 ThiC-associated domain LK03_RS03305 PF01964 Radical SAM ThiC family LK03_RS03310 PF02321 Outer membrane efflux protein LK03_RS03315 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LK03_RS03320 PF00893 Small Multidrug Resistance protein LK03_RS03325 PF01266 FAD dependent oxidoreductase LK03_RS03340 PF00294 pfkB family carbohydrate kinase LK03_RS03340 PF01467 Cytidylyltransferase-like LK03_RS03345 PF00005 ABC transporter LK03_RS03345 PF00664 ABC transporter transmembrane region LK03_RS03360 PF00534 Glycosyl transferases group 1 LK03_RS03360 PF13439 Glycosyltransferase Family 4 LK03_RS03385 PF00534 Glycosyl transferases group 1 LK03_RS03390 PF16861 Carbamoyltransferase C-terminus LK03_RS03390 PF02543 Carbamoyltransferase N-terminus LK03_RS03395 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LK03_RS03400 PF00474 Sodium:solute symporter family LK03_RS03405 PF00171 Aldehyde dehydrogenase family LK03_RS03405 PF14850 DNA-binding domain of Proline dehydrogenase LK03_RS03405 PF01619 Proline dehydrogenase LK03_RS03405 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LK03_RS03415 PF07690 Major Facilitator Superfamily LK03_RS03420 PF00270 DEAD/DEAH box helicase LK03_RS03420 PF00271 Helicase conserved C-terminal domain LK03_RS03420 PF03880 DbpA RNA binding domain LK03_RS03430 PF12805 FUSC-like inner membrane protein yccS LK03_RS03440 PF01863 Protein of unknown function DUF45 LK03_RS03445 PF01116 Fructose-bisphosphate aldolase class-II LK03_RS03460 PF00162 Phosphoglycerate kinase LK03_RS03465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK03_RS03465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK03_RS03470 PF02779 Transketolase, pyrimidine binding domain LK03_RS03470 PF00456 Transketolase, thiamine diphosphate binding domain LK03_RS03470 PF02780 Transketolase, C-terminal domain LK03_RS03480 PF02773 S-adenosylmethionine synthetase, C-terminal domain LK03_RS03480 PF00438 S-adenosylmethionine synthetase, N-terminal domain LK03_RS03480 PF02772 S-adenosylmethionine synthetase, central domain LK03_RS03490 PF01653 NAD-dependent DNA ligase adenylation domain LK03_RS03490 PF03120 NAD-dependent DNA ligase OB-fold domain LK03_RS03520 PF00999 Sodium/hydrogen exchanger family LK03_RS03530 PF05221 S-adenosyl-L-homocysteine hydrolase LK03_RS03530 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LK03_RS03535 PF02219 Methylenetetrahydrofolate reductase LK03_RS03545 PF00270 DEAD/DEAH box helicase LK03_RS03545 PF00271 Helicase conserved C-terminal domain LK03_RS03550 PF04264 YceI-like domain LK03_RS03555 PF01292 Prokaryotic cytochrome b561 LK03_RS03560 PF01593 Flavin containing amine oxidoreductase LK03_RS03565 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system LK03_RS03575 PF00202 Aminotransferase class-III LK03_RS03580 PF04452 RNA methyltransferase LK03_RS03585 PF03006 Haemolysin-III related LK03_RS03595 PF01627 Hpt domain LK03_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS03595 PF01584 CheW-like domain LK03_RS03595 PF00072 Response regulator receiver domain LK03_RS03600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LK03_RS03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS03605 PF01584 CheW-like domain LK03_RS03610 PF00072 Response regulator receiver domain LK03_RS03615 PF00072 Response regulator receiver domain LK03_RS03620 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LK03_RS03620 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LK03_RS03630 PF02622 Uncharacterized ACR, COG1678 LK03_RS03635 PF03652 Holliday junction resolvase LK03_RS03640 PF00156 Phosphoribosyl transferase domain LK03_RS03645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LK03_RS03645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LK03_RS03650 PF01979 Amidohydrolase family LK03_RS03655 PF00227 Proteasome subunit LK03_RS03660 PF07724 AAA domain (Cdc48 subfamily) LK03_RS03660 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS03660 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS03670 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LK03_RS03675 PF00561 alpha/beta hydrolase fold LK03_RS03685 PF01209 ubiE/COQ5 methyltransferase family LK03_RS03695 PF03109 ABC1 family LK03_RS03700 PF01502 Phosphoribosyl-AMP cyclohydrolase LK03_RS03705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LK03_RS03710 PF02416 mttA/Hcf106 family LK03_RS03715 PF02416 mttA/Hcf106 family LK03_RS03720 PF00902 Sec-independent protein translocase protein (TatC) LK03_RS03730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS03730 PF00672 HAMP domain LK03_RS03730 PF16591 Helical bimodular sensor domain LK03_RS03735 PF00005 ABC transporter LK03_RS03740 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS03745 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS03750 PF00535 Glycosyl transferase family 2 LK03_RS03755 PF04349 Periplasmic glucan biosynthesis protein, MdoG LK03_RS03760 PF02580 D-Tyr-tRNA(Tyr) deacylase LK03_RS03765 PF00561 alpha/beta hydrolase fold LK03_RS03785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LK03_RS03790 PF00343 Carbohydrate phosphorylase LK03_RS03800 PF03144 Elongation factor Tu domain 2 LK03_RS03800 PF00009 Elongation factor Tu GTP binding domain LK03_RS03800 PF00679 Elongation factor G C-terminus LK03_RS03805 PF02926 THUMP domain LK03_RS03805 PF02568 Thiamine biosynthesis protein (ThiI) LK03_RS03810 PF00120 Glutamine synthetase, catalytic domain LK03_RS03810 PF03951 Glutamine synthetase, beta-Grasp domain LK03_RS03820 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS03820 PF00989 PAS fold LK03_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS03825 PF00072 Response regulator receiver domain LK03_RS03825 PF02954 Bacterial regulatory protein, Fis family LK03_RS03825 PF00158 Sigma-54 interaction domain LK03_RS03830 PF00675 Insulinase (Peptidase family M16) LK03_RS03835 PF12706 Beta-lactamase superfamily domain LK03_RS03840 PF03070 TENA/THI-4/PQQC family LK03_RS03845 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LK03_RS03850 PF13186 Iron-sulfur cluster-binding domain LK03_RS03850 PF04055 Radical SAM superfamily LK03_RS03865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS03865 PF12806 Acetyl-CoA dehydrogenase C-terminal like LK03_RS03865 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS03865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS03870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS03870 PF12806 Acetyl-CoA dehydrogenase C-terminal like LK03_RS03870 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS03870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS03885 PF08241 Methyltransferase domain LK03_RS03890 PF00561 alpha/beta hydrolase fold LK03_RS03895 PF00155 Aminotransferase class I and II LK03_RS03900 PF06968 Biotin and Thiamin Synthesis associated domain LK03_RS03900 PF04055 Radical SAM superfamily LK03_RS03905 PF00156 Phosphoribosyl transferase domain LK03_RS03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS03910 PF03459 TOBE domain LK03_RS03915 PF01636 Phosphotransferase enzyme family LK03_RS03920 PF00892 EamA-like transporter family LK03_RS03930 PF01274 Malate synthase LK03_RS03935 PF00158 Sigma-54 interaction domain LK03_RS03935 PF02954 Bacterial regulatory protein, Fis family LK03_RS03935 PF00072 Response regulator receiver domain LK03_RS03945 PF00929 Exonuclease LK03_RS03975 PF13439 Glycosyltransferase Family 4 LK03_RS03975 PF00534 Glycosyl transferases group 1 LK03_RS03980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LK03_RS03985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LK03_RS03990 PF03710 Glutamate-ammonia ligase adenylyltransferase LK03_RS03990 PF08335 GlnD PII-uridylyltransferase LK03_RS03995 PF00456 Transketolase, thiamine diphosphate binding domain LK03_RS03995 PF17831 Pyruvate dehydrogenase E1 component middle domain LK03_RS04000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK03_RS04000 PF02817 e3 binding domain LK03_RS04000 PF00364 Biotin-requiring enzyme LK03_RS04005 PF00563 EAL domain LK03_RS04005 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS04005 PF03707 Bacterial signalling protein N terminal repeat LK03_RS04010 PF01625 Peptide methionine sulfoxide reductase LK03_RS04025 PF01553 Acyltransferase LK03_RS04030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LK03_RS04030 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS04035 PF00551 Formyl transferase LK03_RS04045 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK03_RS04045 PF01571 Aminomethyltransferase folate-binding domain LK03_RS04045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS04045 PF17806 Sarcosine oxidase A3 domain LK03_RS04055 PF01266 FAD dependent oxidoreductase LK03_RS04060 PF00464 Serine hydroxymethyltransferase LK03_RS04065 PF01212 Beta-eliminating lyase LK03_RS04080 PF00042 Globin LK03_RS04080 PF00175 Oxidoreductase NAD-binding domain LK03_RS04080 PF00970 Oxidoreductase FAD-binding domain LK03_RS04085 PF00355 Rieske [2Fe-2S] domain LK03_RS04085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK03_RS04095 PF01012 Electron transfer flavoprotein domain LK03_RS04095 PF00766 Electron transfer flavoprotein FAD-binding domain LK03_RS04100 PF02754 Cysteine-rich domain LK03_RS04100 PF02665 Nitrate reductase gamma subunit LK03_RS04100 PF13183 4Fe-4S dicluster domain LK03_RS04105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK03_RS04125 PF12833 Helix-turn-helix domain LK03_RS04125 PF01965 DJ-1/PfpI family LK03_RS04135 PF05853 beta-keto acid cleavage enzyme LK03_RS04140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK03_RS04140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK03_RS04155 PF12833 Helix-turn-helix domain LK03_RS04155 PF01965 DJ-1/PfpI family LK03_RS04160 PF03313 Serine dehydratase alpha chain LK03_RS04160 PF03315 Serine dehydratase beta chain LK03_RS04165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK03_RS04170 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS04175 PF00005 ABC transporter LK03_RS04175 PF00571 CBS domain LK03_RS04180 PF07715 TonB-dependent Receptor Plug Domain LK03_RS04180 PF00593 TonB dependent receptor LK03_RS04185 PF00977 Histidine biosynthesis protein LK03_RS04190 PF00977 Histidine biosynthesis protein LK03_RS04200 PF00117 Glutamine amidotransferase class-I LK03_RS04205 PF00475 Imidazoleglycerol-phosphate dehydratase LK03_RS04210 PF07690 Major Facilitator Superfamily LK03_RS04220 PF10576 Iron-sulfur binding domain of endonuclease III LK03_RS04220 PF00730 HhH-GPD superfamily base excision DNA repair protein LK03_RS04220 PF00633 Helix-hairpin-helix motif LK03_RS04220 PF14815 NUDIX domain LK03_RS04225 PF04362 Bacterial Fe(2+) trafficking LK03_RS04240 PF00324 Amino acid permease LK03_RS04245 PF00005 ABC transporter LK03_RS04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS04255 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS04260 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS04315 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS04315 PF03707 Bacterial signalling protein N terminal repeat LK03_RS04315 PF00563 EAL domain LK03_RS04320 PF17820 PDZ domain LK03_RS04320 PF13180 PDZ domain LK03_RS04330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS04330 PF03466 LysR substrate binding domain LK03_RS04335 PF00437 Type II/IV secretion system protein LK03_RS04340 PF01168 Alanine racemase, N-terminal domain LK03_RS04345 PF03807 NADP oxidoreductase coenzyme F420-dependent LK03_RS04345 PF14748 Pyrroline-5-carboxylate reductase dimerisation LK03_RS04350 PF02325 YGGT family LK03_RS04355 PF00561 alpha/beta hydrolase fold LK03_RS04360 PF00561 alpha/beta hydrolase fold LK03_RS04360 PF07021 Methionine biosynthesis protein MetW LK03_RS04370 PF01725 Ham1 family LK03_RS04375 PF06969 HemN C-terminal domain LK03_RS04375 PF04055 Radical SAM superfamily LK03_RS04385 PF02390 Putative methyltransferase LK03_RS04390 PF05690 Thiazole biosynthesis protein ThiG LK03_RS04395 PF05690 Thiazole biosynthesis protein ThiG LK03_RS04395 PF02597 ThiS family LK03_RS04400 PF04241 Protein of unknown function (DUF423) LK03_RS04405 PF00912 Transglycosylase LK03_RS04410 PF04542 Sigma-70 region 2 LK03_RS04410 PF04545 Sigma-70, region 4 LK03_RS04410 PF00140 Sigma-70 factor, region 1.2 LK03_RS04415 PF18075 FtsX extracellular domain LK03_RS04420 PF00005 ABC transporter LK03_RS04425 PF00448 SRP54-type protein, GTPase domain LK03_RS04425 PF02881 SRP54-type protein, helical bundle domain LK03_RS04430 PF05193 Peptidase M16 inactive domain LK03_RS04430 PF00675 Insulinase (Peptidase family M16) LK03_RS04435 PF05193 Peptidase M16 inactive domain LK03_RS04445 PF05193 Peptidase M16 inactive domain LK03_RS04445 PF00675 Insulinase (Peptidase family M16) LK03_RS04460 PF00581 Rhodanese-like domain LK03_RS04465 PF01467 Cytidylyltransferase-like LK03_RS04470 PF00037 4Fe-4S binding domain LK03_RS04475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LK03_RS04475 PF06827 Zinc finger found in FPG and IleRS LK03_RS04475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LK03_RS04480 PF08668 HDOD domain LK03_RS04485 PF17785 PUA-like domain LK03_RS04485 PF10672 S-adenosylmethionine-dependent methyltransferase LK03_RS04490 PF07690 Major Facilitator Superfamily LK03_RS04500 PF00920 Dehydratase family LK03_RS04510 PF00375 Sodium:dicarboxylate symporter family LK03_RS04515 PF03466 LysR substrate binding domain LK03_RS04515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS04520 PF07690 Major Facilitator Superfamily LK03_RS04525 PF01208 Uroporphyrinogen decarboxylase (URO-D) LK03_RS04530 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS04530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LK03_RS04535 PF01645 Conserved region in glutamate synthase LK03_RS04535 PF04898 Glutamate synthase central domain LK03_RS04535 PF00310 Glutamine amidotransferases class-II LK03_RS04535 PF01493 GXGXG motif LK03_RS04545 PF01761 3-dehydroquinate synthase LK03_RS04550 PF01202 Shikimate kinase LK03_RS04555 PF07660 Secretin and TonB N terminus short domain LK03_RS04555 PF03958 Bacterial type II/III secretion system short domain LK03_RS04555 PF00263 Bacterial type II and III secretion system protein LK03_RS04555 PF11741 AMIN domain LK03_RS04560 PF04351 Pilus assembly protein, PilP LK03_RS04570 PF11104 Type IV pilus assembly protein PilM; LK03_RS04575 PF17092 Penicillin-binding protein OB-like domain LK03_RS04575 PF00905 Penicillin binding protein transpeptidase domain LK03_RS04575 PF00912 Transglycosylase LK03_RS04580 PF00390 Malic enzyme, N-terminal domain LK03_RS04580 PF03949 Malic enzyme, NAD binding domain LK03_RS04590 PF01197 Ribosomal protein L31 LK03_RS04595 PF00270 DEAD/DEAH box helicase LK03_RS04595 PF00271 Helicase conserved C-terminal domain LK03_RS04595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LK03_RS04595 PF18074 Primosomal protein N C-terminal domain LK03_RS04595 PF17764 3′ DNA-binding domain (3′BD) LK03_RS04600 PF05746 DALR anticodon binding domain LK03_RS04600 PF00750 tRNA synthetases class I (R) LK03_RS04600 PF03485 Arginyl tRNA synthetase N terminal domain LK03_RS04615 PF00877 NlpC/P60 family LK03_RS04620 PF07660 Secretin and TonB N terminus short domain LK03_RS04620 PF00593 TonB dependent receptor LK03_RS04620 PF07715 TonB-dependent Receptor Plug Domain LK03_RS04625 PF00486 Transcriptional regulatory protein, C terminal LK03_RS04625 PF00072 Response regulator receiver domain LK03_RS04630 PF00672 HAMP domain LK03_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS04630 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS04650 PF03781 Sulfatase-modifying factor enzyme 1 LK03_RS04660 PF00005 ABC transporter LK03_RS04660 PF12704 MacB-like periplasmic core domain LK03_RS04660 PF02687 FtsX-like permease family LK03_RS04665 PF00069 Protein kinase domain LK03_RS04665 PF03793 PASTA domain LK03_RS04680 PF06761 Intracellular multiplication and human macrophage-killing LK03_RS04680 PF14331 ImcF-related N-terminal domain LK03_RS04680 PF06744 Type VI secretion protein IcmF C-terminal LK03_RS04685 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK03_RS04685 PF00691 OmpA family LK03_RS04690 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LK03_RS04705 PF06812 ImpA, N-terminal, type VI secretion system LK03_RS04710 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LK03_RS04715 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK03_RS04720 PF05638 Type VI secretion system effector, Hcp LK03_RS04725 PF04965 Gene 25-like lysozyme LK03_RS04730 PF05947 Type VI secretion system, TssF LK03_RS04740 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS04740 PF07724 AAA domain (Cdc48 subfamily) LK03_RS04740 PF17871 AAA lid domain LK03_RS04740 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS04745 PF04717 Type VI secretion system, phage-baseplate injector LK03_RS04765 PF03573 outer membrane porin, OprD family LK03_RS04770 PF04371 Porphyromonas-type peptidyl-arginine deiminase LK03_RS04775 PF00202 Aminotransferase class-III LK03_RS04780 PF02743 Cache domain LK03_RS04780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS04780 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS04785 PF02954 Bacterial regulatory protein, Fis family LK03_RS04785 PF00072 Response regulator receiver domain LK03_RS04785 PF00158 Sigma-54 interaction domain LK03_RS04790 PF00459 Inositol monophosphatase family LK03_RS04795 PF00293 NUDIX domain LK03_RS04800 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS04805 PF00403 Heavy-metal-associated domain LK03_RS04810 PF13411 MerR HTH family regulatory protein LK03_RS04820 PF00303 Thymidylate synthase LK03_RS04825 PF01790 Prolipoprotein diacylglyceryl transferase LK03_RS04835 PF02896 PEP-utilising enzyme, TIM barrel domain LK03_RS04835 PF00391 PEP-utilising enzyme, mobile domain LK03_RS04835 PF01590 GAF domain LK03_RS04835 PF05524 PEP-utilising enzyme, N-terminal LK03_RS04840 PF00293 NUDIX domain LK03_RS04850 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS04850 PF00585 C-terminal regulatory domain of Threonine dehydratase LK03_RS04855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LK03_RS04860 PF06977 SdiA-regulated LK03_RS04865 PF06977 SdiA-regulated LK03_RS04870 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK03_RS04875 PF02913 FAD linked oxidases, C-terminal domain LK03_RS04875 PF01565 FAD binding domain LK03_RS04880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS04880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS04880 PF01842 ACT domain LK03_RS04885 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS04890 PF04463 Protein of unknown function (DUF523) LK03_RS04915 PF01804 Penicillin amidase LK03_RS04920 PF00561 alpha/beta hydrolase fold LK03_RS04925 PF03180 NLPA lipoprotein LK03_RS04930 PF00158 Sigma-54 interaction domain LK03_RS04940 PF02472 Biopolymer transport protein ExbD/TolR LK03_RS04945 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS04950 PF03544 Gram-negative bacterial TonB protein C-terminal LK03_RS04955 PF01293 Phosphoenolpyruvate carboxykinase LK03_RS04960 PF01430 Hsp33 protein LK03_RS04970 PF01479 S4 domain LK03_RS04975 PF08443 RimK-like ATP-grasp domain LK03_RS04975 PF18030 RimK PreATP-grasp domain LK03_RS04980 PF18030 RimK PreATP-grasp domain LK03_RS04980 PF08443 RimK-like ATP-grasp domain LK03_RS04985 PF00672 HAMP domain LK03_RS04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS04985 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS04990 PF00072 Response regulator receiver domain LK03_RS04990 PF00486 Transcriptional regulatory protein, C terminal LK03_RS04995 PF00575 S1 RNA binding domain LK03_RS04995 PF17674 HHH domain LK03_RS04995 PF09371 Tex-like protein N-terminal domain LK03_RS04995 PF16921 Tex protein YqgF-like domain LK03_RS05000 PF04262 Glutamate-cysteine ligase LK03_RS05010 PF07715 TonB-dependent Receptor Plug Domain LK03_RS05010 PF00593 TonB dependent receptor LK03_RS05020 PF08281 Sigma-70, region 4 LK03_RS05020 PF04542 Sigma-70 region 2 LK03_RS05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05025 PF03459 TOBE domain LK03_RS05030 PF00005 ABC transporter LK03_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05040 PF00296 Luciferase-like monooxygenase LK03_RS05045 PF09084 NMT1/THI5 like LK03_RS05050 PF03358 NADPH-dependent FMN reductase LK03_RS05055 PF10417 C-terminal domain of 1-Cys peroxiredoxin LK03_RS05055 PF00578 AhpC/TSA family LK03_RS05060 PF03573 outer membrane porin, OprD family LK03_RS05065 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK03_RS05070 PF00005 ABC transporter LK03_RS05075 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LK03_RS05085 PF02028 BCCT, betaine/carnitine/choline family transporter LK03_RS05090 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS05095 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05105 PF00005 ABC transporter LK03_RS05110 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS05110 PF03707 Bacterial signalling protein N terminal repeat LK03_RS05110 PF00563 EAL domain LK03_RS05115 PF08448 PAS fold LK03_RS05115 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS05120 PF00202 Aminotransferase class-III LK03_RS05125 PF00171 Aldehyde dehydrogenase family LK03_RS05130 PF01597 Glycine cleavage H-protein LK03_RS05135 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK03_RS05135 PF01571 Aminomethyltransferase folate-binding domain LK03_RS05140 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05150 PF01494 FAD binding domain LK03_RS05160 PF01494 FAD binding domain LK03_RS05165 PF00557 Metallopeptidase family M24 LK03_RS05165 PF05195 Aminopeptidase P, N-terminal domain LK03_RS05170 PF03695 Uncharacterised protein family (UPF0149) LK03_RS05180 PF05164 Cell division protein ZapA LK03_RS05185 PF01812 5-formyltetrahydrofolate cyclo-ligase family LK03_RS05220 PF00970 Oxidoreductase FAD-binding domain LK03_RS05220 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS05220 PF00175 Oxidoreductase NAD-binding domain LK03_RS05225 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LK03_RS05230 PF07497 Rho termination factor, RNA-binding domain LK03_RS05230 PF07498 Rho termination factor, N-terminal domain LK03_RS05230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK03_RS05235 PF00085 Thioredoxin LK03_RS05240 PF02541 Ppx/GppA phosphatase family LK03_RS05245 PF13089 Polyphosphate kinase N-terminal domain LK03_RS05245 PF02503 Polyphosphate kinase middle domain LK03_RS05245 PF13090 Polyphosphate kinase C-terminal domain 2 LK03_RS05245 PF17941 Polyphosphate kinase C-terminal domain 1 LK03_RS05250 PF00490 Delta-aminolevulinic acid dehydratase LK03_RS05255 PF09335 SNARE associated Golgi protein LK03_RS05265 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LK03_RS05275 PF02321 Outer membrane efflux protein LK03_RS05280 PF13533 Biotin-lipoyl like LK03_RS05290 PF04632 Fusaric acid resistance protein family LK03_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05315 PF00005 ABC transporter LK03_RS05325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LK03_RS05330 PF01266 FAD dependent oxidoreductase LK03_RS05335 PF00171 Aldehyde dehydrogenase family LK03_RS05340 PF03466 LysR substrate binding domain LK03_RS05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05345 PF07063 Domain of unknown function (DUF1338) LK03_RS05350 PF01554 MatE LK03_RS05355 PF00563 EAL domain LK03_RS05355 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS05355 PF03707 Bacterial signalling protein N terminal repeat LK03_RS05360 PF13361 UvrD-like helicase C-terminal domain LK03_RS05360 PF00580 UvrD/REP helicase N-terminal domain LK03_RS05370 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LK03_RS05370 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LK03_RS05375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK03_RS05385 PF01168 Alanine racemase, N-terminal domain LK03_RS05385 PF00842 Alanine racemase, C-terminal domain LK03_RS05390 PF01266 FAD dependent oxidoreductase LK03_RS05395 PF01037 Lrp/AsnC ligand binding domain LK03_RS05405 PF01266 FAD dependent oxidoreductase LK03_RS05415 PF00155 Aminotransferase class I and II LK03_RS05415 PF00392 Bacterial regulatory proteins, gntR family LK03_RS05420 PF13091 PLD-like domain LK03_RS05430 PF00171 Aldehyde dehydrogenase family LK03_RS05445 PF00471 Ribosomal protein L33 LK03_RS05450 PF00830 Ribosomal L28 family LK03_RS05455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS05460 PF04002 RadC-like JAB domain LK03_RS05465 PF02441 Flavoprotein LK03_RS05465 PF04127 DNA / pantothenate metabolism flavoprotein LK03_RS05470 PF00692 dUTPase LK03_RS05475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK03_RS05475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK03_RS05475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK03_RS05475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK03_RS05480 PF00696 Amino acid kinase family LK03_RS05485 PF03783 Curli production assembly/transport component CsgG LK03_RS05495 PF05643 Putative bacterial lipoprotein (DUF799) LK03_RS05500 PF00156 Phosphoribosyl transferase domain LK03_RS05505 PF03372 Endonuclease/Exonuclease/phosphatase family LK03_RS05510 PF01138 3' exoribonuclease family, domain 1 LK03_RS05510 PF03725 3' exoribonuclease family, domain 2 LK03_RS05515 PF08340 Domain of unknown function (DUF1732) LK03_RS05515 PF03755 YicC-like family, N-terminal region LK03_RS05520 PF00625 Guanylate kinase LK03_RS05530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05530 PF03466 LysR substrate binding domain LK03_RS05535 PF01192 RNA polymerase Rpb6 LK03_RS05540 PF04607 Region found in RelA / SpoT proteins LK03_RS05540 PF02824 TGS domain LK03_RS05540 PF13291 ACT domain LK03_RS05545 PF01042 Endoribonuclease L-PSP LK03_RS05560 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS05565 PF02472 Biopolymer transport protein ExbD/TolR LK03_RS05570 PF03544 Gram-negative bacterial TonB protein C-terminal LK03_RS05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05575 PF03466 LysR substrate binding domain LK03_RS05580 PF17191 RecG wedge domain LK03_RS05580 PF00270 DEAD/DEAH box helicase LK03_RS05580 PF00271 Helicase conserved C-terminal domain LK03_RS05595 PF00216 Bacterial DNA-binding protein LK03_RS05600 PF04345 Chorismate lyase LK03_RS05605 PF01040 UbiA prenyltransferase family LK03_RS05610 PF00486 Transcriptional regulatory protein, C terminal LK03_RS05610 PF00072 Response regulator receiver domain LK03_RS05615 PF00989 PAS fold LK03_RS05615 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS05615 PF11808 Phosphate regulon sensor protein PhoR LK03_RS05620 PF00571 CBS domain LK03_RS05620 PF01595 Cyclin M transmembrane N-terminal domain LK03_RS05620 PF03471 Transporter associated domain LK03_RS05625 PF00072 Response regulator receiver domain LK03_RS05630 PF01895 PhoU domain LK03_RS05635 PF00005 ABC transporter LK03_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS05650 PF12849 PBP superfamily domain LK03_RS05655 PF07690 Major Facilitator Superfamily LK03_RS05660 PF03061 Thioesterase superfamily LK03_RS05665 PF01263 Aldose 1-epimerase LK03_RS05680 PF02222 ATP-grasp domain LK03_RS05680 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LK03_RS05685 PF00731 AIR carboxylase LK03_RS05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05690 PF03466 LysR substrate binding domain LK03_RS05695 PF00206 Lyase LK03_RS05695 PF10415 Fumarase C C-terminus LK03_RS05700 PF00155 Aminotransferase class I and II LK03_RS05700 PF00392 Bacterial regulatory proteins, gntR family LK03_RS05705 PF13673 Acetyltransferase (GNAT) domain LK03_RS05710 PF00364 Biotin-requiring enzyme LK03_RS05710 PF02436 Conserved carboxylase domain LK03_RS05710 PF00682 HMGL-like LK03_RS05715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK03_RS05715 PF00289 Biotin carboxylase, N-terminal domain LK03_RS05715 PF02785 Biotin carboxylase C-terminal domain LK03_RS05720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05720 PF03466 LysR substrate binding domain LK03_RS05725 PF01418 Helix-turn-helix domain, rpiR family LK03_RS05725 PF01380 SIS domain LK03_RS05730 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LK03_RS05730 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LK03_RS05740 PF13361 UvrD-like helicase C-terminal domain LK03_RS05740 PF00580 UvrD/REP helicase N-terminal domain LK03_RS05755 PF02254 TrkA-N domain LK03_RS05755 PF00999 Sodium/hydrogen exchanger family LK03_RS05760 PF03061 Thioesterase superfamily LK03_RS05765 PF08543 Phosphomethylpyrimidine kinase LK03_RS05775 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS05775 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS05785 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS05785 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS05795 PF02649 Type I GTP cyclohydrolase folE2 LK03_RS05800 PF12276 Protein of unknown function (DUF3617) LK03_RS05805 PF13091 PLD-like domain LK03_RS05805 PF13396 Phospholipase_D-nuclease N-terminal LK03_RS05815 PF02350 UDP-N-acetylglucosamine 2-epimerase LK03_RS05825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LK03_RS05825 PF13632 Glycosyl transferase family group 2 LK03_RS05835 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX LK03_RS05845 PF03062 MBOAT, membrane-bound O-acyltransferase family LK03_RS05850 PF00550 Phosphopantetheine attachment site LK03_RS05855 PF13193 AMP-binding enzyme C-terminal domain LK03_RS05855 PF00501 AMP-binding enzyme LK03_RS05865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS05865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS05865 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS05880 PF04324 BFD-like [2Fe-2S] binding domain LK03_RS05880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS05910 PF04829 Pre-toxin domain with VENN motif LK03_RS05910 PF13332 Hemagglutinin repeat LK03_RS05935 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LK03_RS05935 PF08479 POTRA domain, ShlB-type LK03_RS05935 PF17287 POTRA domain LK03_RS05940 PF03466 LysR substrate binding domain LK03_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05955 PF00171 Aldehyde dehydrogenase family LK03_RS05960 PF01494 FAD binding domain LK03_RS05965 PF02311 AraC-like ligand binding domain LK03_RS05965 PF12833 Helix-turn-helix domain LK03_RS05970 PF02558 Ketopantoate reductase PanE/ApbA LK03_RS05970 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK03_RS05975 PF03573 outer membrane porin, OprD family LK03_RS05980 PF07690 Major Facilitator Superfamily LK03_RS05985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS05985 PF00205 Thiamine pyrophosphate enzyme, central domain LK03_RS05985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS05990 PF03466 LysR substrate binding domain LK03_RS05990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS05995 PF01810 LysE type translocator LK03_RS06015 PF10137 Predicted nucleotide-binding protein containing TIR-like domain LK03_RS06050 PF13007 Transposase C of IS166 homeodomain LK03_RS06050 PF13817 IS66 C-terminal element LK03_RS06050 PF03050 Transposase IS66 family LK03_RS06050 PF13005 zinc-finger binding domain of transposase IS66 LK03_RS06060 PF04851 Type III restriction enzyme, res subunit LK03_RS06060 PF00271 Helicase conserved C-terminal domain LK03_RS06065 PF11426 Tn7 transposition regulator TnsC LK03_RS06065 PF13401 AAA domain LK03_RS06070 PF08722 TnsA endonuclease N terminal LK03_RS06070 PF08721 TnsA endonuclease C terminal LK03_RS06075 PF01380 SIS domain LK03_RS06080 PF08220 DeoR-like helix-turn-helix domain LK03_RS06080 PF00455 DeoR C terminal sensor domain LK03_RS06085 PF12804 MobA-like NTP transferase domain LK03_RS06085 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS06090 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LK03_RS06090 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LK03_RS06095 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK03_RS06095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK03_RS06100 PF00231 ATP synthase LK03_RS06105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK03_RS06105 PF00306 ATP synthase alpha/beta chain, C terminal domain LK03_RS06105 PF02874 ATP synthase alpha/beta family, beta-barrel domain LK03_RS06110 PF00213 ATP synthase delta (OSCP) subunit LK03_RS06115 PF00430 ATP synthase B/B' CF(0) LK03_RS06120 PF00137 ATP synthase subunit C LK03_RS06125 PF00119 ATP synthase A chain LK03_RS06130 PF03899 ATP synthase I chain LK03_RS06135 PF17762 HTH domain found in ParB protein LK03_RS06135 PF02195 ParB-like nuclease domain LK03_RS06140 PF13614 AAA domain LK03_RS06145 PF02527 rRNA small subunit methyltransferase G LK03_RS06150 PF13932 GidA associated domain LK03_RS06150 PF01134 Glucose inhibited division protein A LK03_RS06155 PF01926 50S ribosome-binding GTPase LK03_RS06155 PF12631 MnmE helical domain LK03_RS06155 PF10396 GTP-binding protein TrmE N-terminus LK03_RS06160 PF14849 YidC periplasmic domain LK03_RS06160 PF02096 60Kd inner membrane protein LK03_RS06165 PF00825 Ribonuclease P LK03_RS06170 PF11638 DnaA N-terminal domain LK03_RS06170 PF08299 Bacterial dnaA protein helix-turn-helix LK03_RS06170 PF00308 Bacterial dnaA protein LK03_RS06175 PF02768 DNA polymerase III beta subunit, C-terminal domain LK03_RS06175 PF02767 DNA polymerase III beta subunit, central domain LK03_RS06175 PF00712 DNA polymerase III beta subunit, N-terminal domain LK03_RS06180 PF02463 RecF/RecN/SMC N terminal domain LK03_RS06185 PF00204 DNA gyrase B LK03_RS06185 PF00986 DNA gyrase B subunit, carboxyl terminus LK03_RS06185 PF18053 DNA gyrase B subunit insert domain LK03_RS06185 PF01751 Toprim domain LK03_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS06190 PF00072 Response regulator receiver domain LK03_RS06190 PF00486 Transcriptional regulatory protein, C terminal LK03_RS06195 PF00672 HAMP domain LK03_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS06195 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS06210 PF00873 AcrB/AcrD/AcrF family LK03_RS06215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS06215 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS06220 PF02321 Outer membrane efflux protein LK03_RS06225 PF03573 outer membrane porin, OprD family LK03_RS06230 PF00486 Transcriptional regulatory protein, C terminal LK03_RS06230 PF00072 Response regulator receiver domain LK03_RS06245 PF00732 GMC oxidoreductase LK03_RS06245 PF05199 GMC oxidoreductase LK03_RS06250 PF00083 Sugar (and other) transporter LK03_RS06250 PF08946 Osmosensory transporter coiled coil LK03_RS06265 PF02092 Glycyl-tRNA synthetase beta subunit LK03_RS06265 PF05746 DALR anticodon binding domain LK03_RS06270 PF02091 Glycyl-tRNA synthetase alpha subunit LK03_RS06275 PF03352 Methyladenine glycosylase LK03_RS06290 PF02254 TrkA-N domain LK03_RS06290 PF02080 TrkA-C domain LK03_RS06295 PF01029 NusB family LK03_RS06295 PF01189 16S rRNA methyltransferase RsmB/F LK03_RS06300 PF00551 Formyl transferase LK03_RS06300 PF02911 Formyl transferase, C-terminal domain LK03_RS06305 PF01327 Polypeptide deformylase LK03_RS06310 PF02481 DNA recombination-mediator protein A LK03_RS06310 PF17782 DprA winged helix domain LK03_RS06315 PF01300 Telomere recombination LK03_RS06320 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS06320 PF00107 Zinc-binding dehydrogenase LK03_RS06325 PF01218 Coproporphyrinogen III oxidase LK03_RS06330 PF08501 Shikimate dehydrogenase substrate binding domain LK03_RS06330 PF01488 Shikimate / quinate 5-dehydrogenase LK03_RS06330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LK03_RS06335 PF00916 Sulfate permease family LK03_RS06335 PF01740 STAS domain LK03_RS06345 PF12411 Choline sulfatase enzyme C terminal LK03_RS06345 PF00884 Sulfatase LK03_RS06350 PF03466 LysR substrate binding domain LK03_RS06350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS06360 PF00290 Tryptophan synthase alpha chain LK03_RS06365 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS06370 PF03466 LysR substrate binding domain LK03_RS06370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS06380 PF07311 Dodecin LK03_RS06390 PF00296 Luciferase-like monooxygenase LK03_RS06395 PF02566 OsmC-like protein LK03_RS06400 PF06649 Protein of unknown function (DUF1161) LK03_RS06420 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS06425 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS06430 PF01432 Peptidase family M3 LK03_RS06435 PF09526 Probable metal-binding protein (DUF2387) LK03_RS06440 PF01432 Peptidase family M3 LK03_RS06445 PF04055 Radical SAM superfamily LK03_RS06450 PF00484 Carbonic anhydrase LK03_RS06455 PF00916 Sulfate permease family LK03_RS06455 PF01740 STAS domain LK03_RS06465 PF02630 SCO1/SenC LK03_RS06470 PF01435 Peptidase family M48 LK03_RS06475 PF03180 NLPA lipoprotein LK03_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS06485 PF00005 ABC transporter LK03_RS06485 PF09383 NIL domain LK03_RS06490 PF00199 Catalase LK03_RS06490 PF06628 Catalase-related immune-responsive LK03_RS06490 PF18011 C-terminal domain found in long catalases LK03_RS06500 PF00950 ABC 3 transport family LK03_RS06505 PF00005 ABC transporter LK03_RS06510 PF01475 Ferric uptake regulator family LK03_RS06515 PF01297 Zinc-uptake complex component A periplasmic LK03_RS06520 PF01636 Phosphotransferase enzyme family LK03_RS06530 PF00476 DNA polymerase family A LK03_RS06530 PF01612 3'-5' exonuclease LK03_RS06530 PF01367 5'-3' exonuclease, C-terminal SAM fold LK03_RS06530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LK03_RS06535 PF01926 50S ribosome-binding GTPase LK03_RS06540 PF00034 Cytochrome c LK03_RS06545 PF01323 DSBA-like thioredoxin domain LK03_RS06555 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS06560 PF01510 N-acetylmuramoyl-L-alanine amidase LK03_RS06565 PF00563 EAL domain LK03_RS06565 PF12792 CSS motif domain associated with EAL LK03_RS06570 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB LK03_RS06570 PF08448 PAS fold LK03_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS06570 PF00672 HAMP domain LK03_RS06570 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS06575 PF02954 Bacterial regulatory protein, Fis family LK03_RS06575 PF00158 Sigma-54 interaction domain LK03_RS06575 PF00072 Response regulator receiver domain LK03_RS06600 PF00375 Sodium:dicarboxylate symporter family LK03_RS06605 PF07670 Nucleoside recognition LK03_RS06620 PF02690 Na+/Pi-cotransporter LK03_RS06625 PF03600 Citrate transporter LK03_RS06655 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain LK03_RS06655 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain LK03_RS06660 PF02233 NAD(P) transhydrogenase beta subunit LK03_RS06665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LK03_RS06670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LK03_RS06670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LK03_RS06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS06675 PF03466 LysR substrate binding domain LK03_RS06680 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS06680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS06680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS06685 PF02515 CoA-transferase family III LK03_RS06720 PF01078 Magnesium chelatase, subunit ChlI LK03_RS06720 PF13335 Magnesium chelatase, subunit ChlI C-terminal LK03_RS06725 PF00690 Cation transporter/ATPase, N-terminus LK03_RS06725 PF00689 Cation transporting ATPase, C-terminus LK03_RS06730 PF04380 Membrane fusogenic activity LK03_RS06735 PF00543 Nitrogen regulatory protein P-II LK03_RS06740 PF00909 Ammonium Transporter Family LK03_RS06750 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS06755 PF00589 Phage integrase family LK03_RS06755 PF02899 Phage integrase, N-terminal SAM-like domain LK03_RS06765 PF01678 Diaminopimelate epimerase LK03_RS06770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK03_RS06770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LK03_RS06780 PF01491 Frataxin-like domain LK03_RS06790 PF01272 Transcription elongation factor, GreA/GreB, C-term LK03_RS06790 PF14760 Rnk N-terminus LK03_RS06800 PF01295 Adenylate cyclase, class-I LK03_RS06800 PF12633 Adenylate cyclase NT domain LK03_RS06815 PF14497 Glutathione S-transferase, C-terminal domain LK03_RS06815 PF13417 Glutathione S-transferase, N-terminal domain LK03_RS06820 PF14698 Argininosuccinate lyase C-terminal LK03_RS06820 PF00206 Lyase LK03_RS06825 PF04397 LytTr DNA-binding domain LK03_RS06825 PF00072 Response regulator receiver domain LK03_RS06830 PF03900 Porphobilinogen deaminase, C-terminal domain LK03_RS06830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LK03_RS06835 PF02602 Uroporphyrinogen-III synthase HemD LK03_RS06850 PF02600 Disulfide bond formation protein DsbB LK03_RS06855 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LK03_RS06860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS06860 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LK03_RS06875 PF00005 ABC transporter LK03_RS06875 PF12848 ABC transporter LK03_RS06880 PF01810 LysE type translocator LK03_RS06895 PF00571 CBS domain LK03_RS06900 PF06965 Na+/H+ antiporter 1 LK03_RS06920 PF00437 Type II/IV secretion system protein LK03_RS06930 PF01037 Lrp/AsnC ligand binding domain LK03_RS06930 PF13404 AsnC-type helix-turn-helix domain LK03_RS06935 PF01928 CYTH domain LK03_RS06940 PF01546 Peptidase family M20/M25/M40 LK03_RS06940 PF07687 Peptidase dimerisation domain LK03_RS06945 PF00583 Acetyltransferase (GNAT) family LK03_RS06945 PF00696 Amino acid kinase family LK03_RS06950 PF00120 Glutamine synthetase, catalytic domain LK03_RS06955 PF00120 Glutamine synthetase, catalytic domain LK03_RS06960 PF00202 Aminotransferase class-III LK03_RS06965 PF13416 Bacterial extracellular solute-binding protein LK03_RS06970 PF13416 Bacterial extracellular solute-binding protein LK03_RS06975 PF00005 ABC transporter LK03_RS06975 PF08402 TOBE domain LK03_RS06980 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS06985 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS06995 PF13533 Biotin-lipoyl like LK03_RS07000 PF13533 Biotin-lipoyl like LK03_RS07005 PF00873 AcrB/AcrD/AcrF family LK03_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS07030 PF12857 TOBE-like domain LK03_RS07030 PF00005 ABC transporter LK03_RS07055 PF00384 Molybdopterin oxidoreductase LK03_RS07060 PF02634 FdhD/NarQ family LK03_RS07065 PF10396 GTP-binding protein TrmE N-terminus LK03_RS07065 PF12631 MnmE helical domain LK03_RS07065 PF01926 50S ribosome-binding GTPase LK03_RS07075 PF00186 Dihydrofolate reductase LK03_RS07085 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS07085 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS07100 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS07100 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS07110 PF08241 Methyltransferase domain LK03_RS07140 PF00221 Aromatic amino acid lyase LK03_RS07155 PF13193 AMP-binding enzyme C-terminal domain LK03_RS07155 PF00501 AMP-binding enzyme LK03_RS07165 PF00550 Phosphopantetheine attachment site LK03_RS07170 PF00550 Phosphopantetheine attachment site LK03_RS07185 PF13614 AAA domain LK03_RS07190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LK03_RS07195 PF12795 Mechanosensitive ion channel porin domain LK03_RS07195 PF12794 Mechanosensitive ion channel inner membrane domain 1 LK03_RS07195 PF00924 Mechanosensitive ion channel LK03_RS07200 PF00999 Sodium/hydrogen exchanger family LK03_RS07200 PF02080 TrkA-C domain LK03_RS07200 PF03471 Transporter associated domain LK03_RS07205 PF05199 GMC oxidoreductase LK03_RS07205 PF00732 GMC oxidoreductase LK03_RS07210 PF00171 Aldehyde dehydrogenase family LK03_RS07215 PF00440 Bacterial regulatory proteins, tetR family LK03_RS07215 PF13977 BetI-type transcriptional repressor, C-terminal LK03_RS07220 PF02028 BCCT, betaine/carnitine/choline family transporter LK03_RS07225 PF04748 Divergent polysaccharide deacetylase LK03_RS07230 PF03572 Peptidase family S41 LK03_RS07230 PF13180 PDZ domain LK03_RS07235 PF01551 Peptidase family M23 LK03_RS07240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LK03_RS07240 PF01676 Metalloenzyme superfamily LK03_RS07250 PF00462 Glutaredoxin LK03_RS07255 PF02556 Preprotein translocase subunit SecB LK03_RS07260 PF00588 SpoU rRNA Methylase family LK03_RS07270 PF00795 Carbon-nitrogen hydrolase LK03_RS07275 PF01593 Flavin containing amine oxidoreductase LK03_RS07285 PF07690 Major Facilitator Superfamily LK03_RS07290 PF07702 UTRA domain LK03_RS07290 PF00392 Bacterial regulatory proteins, gntR family LK03_RS07315 PF01527 Transposase LK03_RS07320 PF00665 Integrase core domain LK03_RS07330 PF00563 EAL domain LK03_RS07330 PF03707 Bacterial signalling protein N terminal repeat LK03_RS07330 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS07335 PF04542 Sigma-70 region 2 LK03_RS07335 PF00140 Sigma-70 factor, region 1.2 LK03_RS07335 PF03979 Sigma-70 factor, region 1.1 LK03_RS07335 PF04546 Sigma-70, non-essential region LK03_RS07335 PF04545 Sigma-70, region 4 LK03_RS07335 PF04539 Sigma-70 region 3 LK03_RS07340 PF08278 DNA primase DnaG DnaB-binding LK03_RS07340 PF08275 DNA primase catalytic core, N-terminal domain LK03_RS07340 PF01807 CHC2 zinc finger LK03_RS07340 PF10410 DnaB-helicase binding domain of primase LK03_RS07340 PF13662 Toprim domain LK03_RS07345 PF01165 Ribosomal protein S21 LK03_RS07350 PF00814 Glycoprotease family LK03_RS07355 PF02660 Glycerol-3-phosphate acyltransferase LK03_RS07360 PF02152 Dihydroneopterin aldolase LK03_RS07370 PF01743 Poly A polymerase head domain LK03_RS07370 PF01966 HD domain LK03_RS07370 PF12627 Probable RNA and SrmB- binding site of polymerase A LK03_RS07375 PF04293 SpoVR like protein LK03_RS07380 PF04285 Protein of unknown function (DUF444) LK03_RS07385 PF06798 PrkA serine protein kinase C-terminal domain LK03_RS07385 PF08298 PrkA AAA domain LK03_RS07390 PF00581 Rhodanese-like domain LK03_RS07395 PF00149 Calcineurin-like phosphoesterase LK03_RS07400 PF04379 ApaG domain LK03_RS07405 PF00398 Ribosomal RNA adenine dimethylase LK03_RS07410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LK03_RS07415 PF09312 SurA N-terminal domain LK03_RS07415 PF00639 PPIC-type PPIASE domain LK03_RS07420 PF04453 LPS transport system D LK03_RS07420 PF03968 OstA-like protein LK03_RS07425 PF01636 Phosphotransferase enzyme family LK03_RS07430 PF00483 Nucleotidyl transferase LK03_RS07435 PF00226 DnaJ domain LK03_RS07435 PF05099 Tellurite resistance protein TerB LK03_RS07445 PF07730 Histidine kinase LK03_RS07445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS07445 PF00672 HAMP domain LK03_RS07450 PF00072 Response regulator receiver domain LK03_RS07450 PF00196 Bacterial regulatory proteins, luxR family LK03_RS07455 PF08402 TOBE domain LK03_RS07455 PF00005 ABC transporter LK03_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS07470 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS07475 PF00834 Ribulose-phosphate 3 epimerase family LK03_RS07480 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS07485 PF00425 chorismate binding enzyme LK03_RS07485 PF04715 Anthranilate synthase component I, N terminal region LK03_RS07490 PF00657 GDSL-like Lipase/Acylhydrolase LK03_RS07490 PF03797 Autotransporter beta-domain LK03_RS07495 PF00117 Glutamine amidotransferase class-I LK03_RS07500 PF02885 Glycosyl transferase family, helical bundle domain LK03_RS07500 PF00591 Glycosyl transferase family, a/b domain LK03_RS07505 PF00218 Indole-3-glycerol phosphate synthase LK03_RS07515 PF13545 Crp-like helix-turn-helix domain LK03_RS07515 PF00027 Cyclic nucleotide-binding domain LK03_RS07520 PF02566 OsmC-like protein LK03_RS07525 PF03232 Ubiquinone biosynthesis protein COQ7 LK03_RS07530 PF01230 HIT domain LK03_RS07535 PF00106 short chain dehydrogenase LK03_RS07540 PF03653 Uncharacterised protein family (UPF0093) LK03_RS07545 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK03_RS07545 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK03_RS07550 PF01521 Iron-sulphur cluster biosynthesis LK03_RS07555 PF03702 Anhydro-N-acetylmuramic acid kinase LK03_RS07560 PF04225 Opacity-associated protein A LysM-like domain LK03_RS07560 PF01551 Peptidase family M23 LK03_RS07565 PF00579 tRNA synthetases class I (W and Y) LK03_RS07565 PF01479 S4 domain LK03_RS07595 PF03099 Biotin/lipoate A/B protein ligase family LK03_RS07595 PF02237 Biotin protein ligase C terminal domain LK03_RS07595 PF08279 HTH domain LK03_RS07600 PF03309 Type III pantothenate kinase LK03_RS07630 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LK03_RS07635 PF02357 Transcription termination factor nusG LK03_RS07635 PF00467 KOW motif LK03_RS07640 PF03946 Ribosomal protein L11, N-terminal domain LK03_RS07640 PF00298 Ribosomal protein L11, RNA binding domain LK03_RS07645 PF00687 Ribosomal protein L1p/L10e family LK03_RS07650 PF00466 Ribosomal protein L10 LK03_RS07655 PF16320 Ribosomal protein L7/L12 dimerisation domain LK03_RS07655 PF00542 Ribosomal protein L7/L12 C-terminal domain LK03_RS07660 PF04563 RNA polymerase beta subunit LK03_RS07660 PF10385 RNA polymerase beta subunit external 1 domain LK03_RS07660 PF04565 RNA polymerase Rpb2, domain 3 LK03_RS07660 PF04561 RNA polymerase Rpb2, domain 2 LK03_RS07660 PF00562 RNA polymerase Rpb2, domain 6 LK03_RS07660 PF04560 RNA polymerase Rpb2, domain 7 LK03_RS07665 PF04998 RNA polymerase Rpb1, domain 5 LK03_RS07665 PF05000 RNA polymerase Rpb1, domain 4 LK03_RS07665 PF04983 RNA polymerase Rpb1, domain 3 LK03_RS07665 PF00623 RNA polymerase Rpb1, domain 2 LK03_RS07665 PF04997 RNA polymerase Rpb1, domain 1 LK03_RS07670 PF00164 Ribosomal protein S12/S23 LK03_RS07675 PF00177 Ribosomal protein S7p/S5e LK03_RS07680 PF03764 Elongation factor G, domain IV LK03_RS07680 PF00679 Elongation factor G C-terminus LK03_RS07680 PF14492 Elongation Factor G, domain II LK03_RS07680 PF00009 Elongation factor Tu GTP binding domain LK03_RS07680 PF03144 Elongation factor Tu domain 2 LK03_RS07685 PF00009 Elongation factor Tu GTP binding domain LK03_RS07685 PF03144 Elongation factor Tu domain 2 LK03_RS07685 PF03143 Elongation factor Tu C-terminal domain LK03_RS07690 PF00338 Ribosomal protein S10p/S20e LK03_RS07695 PF00297 Ribosomal protein L3 LK03_RS07700 PF00573 Ribosomal protein L4/L1 family LK03_RS07705 PF00276 Ribosomal protein L23 LK03_RS07710 PF03947 Ribosomal Proteins L2, C-terminal domain LK03_RS07710 PF00181 Ribosomal Proteins L2, RNA binding domain LK03_RS07715 PF00203 Ribosomal protein S19 LK03_RS07720 PF00237 Ribosomal protein L22p/L17e LK03_RS07725 PF00189 Ribosomal protein S3, C-terminal domain LK03_RS07725 PF07650 KH domain LK03_RS07730 PF00252 Ribosomal protein L16p/L10e LK03_RS07735 PF00831 Ribosomal L29 protein LK03_RS07740 PF00366 Ribosomal protein S17 LK03_RS07745 PF00238 Ribosomal protein L14p/L23e LK03_RS07750 PF00467 KOW motif LK03_RS07750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LK03_RS07755 PF00281 Ribosomal protein L5 LK03_RS07755 PF00673 ribosomal L5P family C-terminus LK03_RS07760 PF00253 Ribosomal protein S14p/S29e LK03_RS07765 PF00410 Ribosomal protein S8 LK03_RS07770 PF00347 Ribosomal protein L6 LK03_RS07775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LK03_RS07780 PF00333 Ribosomal protein S5, N-terminal domain LK03_RS07780 PF03719 Ribosomal protein S5, C-terminal domain LK03_RS07785 PF00327 Ribosomal protein L30p/L7e LK03_RS07790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LK03_RS07795 PF00344 SecY translocase LK03_RS07800 PF00444 Ribosomal protein L36 LK03_RS07805 PF00416 Ribosomal protein S13/S18 LK03_RS07810 PF00411 Ribosomal protein S11 LK03_RS07815 PF01479 S4 domain LK03_RS07815 PF00163 Ribosomal protein S4/S9 N-terminal domain LK03_RS07820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LK03_RS07820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LK03_RS07820 PF01000 RNA polymerase Rpb3/RpoA insert domain LK03_RS07825 PF01196 Ribosomal protein L17 LK03_RS07830 PF00199 Catalase LK03_RS07830 PF06628 Catalase-related immune-responsive LK03_RS07835 PF00210 Ferritin-like domain LK03_RS07840 PF17755 UvrA DNA-binding domain LK03_RS07840 PF17760 UvrA interaction domain LK03_RS07845 PF07690 Major Facilitator Superfamily LK03_RS07850 PF00436 Single-strand binding protein family LK03_RS07860 PF03466 LysR substrate binding domain LK03_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS07870 PF00710 Asparaginase, N-terminal LK03_RS07870 PF17763 Glutaminase/Asparaginase C-terminal domain LK03_RS07875 PF01235 Sodium:alanine symporter family LK03_RS07890 PF01370 NAD dependent epimerase/dehydratase family LK03_RS07895 PF03922 OmpW family LK03_RS07910 PF02687 FtsX-like permease family LK03_RS07910 PF12704 MacB-like periplasmic core domain LK03_RS07910 PF00005 ABC transporter LK03_RS07925 PF00085 Thioredoxin LK03_RS07940 PF03477 ATP cone domain LK03_RS07945 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LK03_RS07945 PF01872 RibD C-terminal domain LK03_RS07950 PF00677 Lumazine binding domain LK03_RS07955 PF00925 GTP cyclohydrolase II LK03_RS07955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LK03_RS07960 PF00885 6,7-dimethyl-8-ribityllumazine synthase LK03_RS07965 PF01029 NusB family LK03_RS07970 PF00586 AIR synthase related protein, N-terminal domain LK03_RS07970 PF02769 AIR synthase related protein, C-terminal domain LK03_RS07980 PF00925 GTP cyclohydrolase II LK03_RS07985 PF01497 Periplasmic binding protein LK03_RS07990 PF00593 TonB dependent receptor LK03_RS07990 PF07715 TonB-dependent Receptor Plug Domain LK03_RS07995 PF02780 Transketolase, C-terminal domain LK03_RS07995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LK03_RS07995 PF02779 Transketolase, pyrimidine binding domain LK03_RS08000 PF00348 Polyprenyl synthetase LK03_RS08005 PF02609 Exonuclease VII small subunit LK03_RS08010 PF03062 MBOAT, membrane-bound O-acyltransferase family LK03_RS08030 PF00593 TonB dependent receptor LK03_RS08030 PF07715 TonB-dependent Receptor Plug Domain LK03_RS08040 PF08281 Sigma-70, region 4 LK03_RS08040 PF04542 Sigma-70 region 2 LK03_RS08050 PF01011 PQQ enzyme repeat LK03_RS08055 PF04966 Carbohydrate-selective porin, OprB family LK03_RS08065 PF00719 Inorganic pyrophosphatase LK03_RS08070 PF06167 Glucose-regulated metallo-peptidase M90 LK03_RS08075 PF09335 SNARE associated Golgi protein LK03_RS08080 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LK03_RS08085 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LK03_RS08090 PF13520 Amino acid permease LK03_RS08095 PF00171 Aldehyde dehydrogenase family LK03_RS08100 PF01590 GAF domain LK03_RS08100 PF02954 Bacterial regulatory protein, Fis family LK03_RS08100 PF00158 Sigma-54 interaction domain LK03_RS08105 PF08245 Mur ligase middle domain LK03_RS08105 PF01225 Mur ligase family, catalytic domain LK03_RS08105 PF02875 Mur ligase family, glutamate ligase domain LK03_RS08110 PF02441 Flavoprotein LK03_RS08120 PF13460 NAD(P)H-binding LK03_RS08130 PF03788 LrgA family LK03_RS08135 PF04172 LrgB-like family LK03_RS08145 PF09335 SNARE associated Golgi protein LK03_RS08150 PF02245 Methylpurine-DNA glycosylase (MPG) LK03_RS08155 PF00171 Aldehyde dehydrogenase family LK03_RS08160 PF01467 Cytidylyltransferase-like LK03_RS08170 PF02590 Predicted SPOUT methyltransferase LK03_RS08175 PF03717 Penicillin-binding Protein dimerisation domain LK03_RS08175 PF00905 Penicillin binding protein transpeptidase domain LK03_RS08180 PF01098 Cell cycle protein LK03_RS08185 PF13406 Transglycosylase SLT domain LK03_RS08190 PF03330 Lytic transglycolase LK03_RS08190 PF05036 Sporulation related domain LK03_RS08195 PF00768 D-alanyl-D-alanine carboxypeptidase LK03_RS08195 PF07943 Penicillin-binding protein 5, C-terminal domain LK03_RS08200 PF04359 Protein of unknown function (DUF493) LK03_RS08205 PF03099 Biotin/lipoate A/B protein ligase family LK03_RS08210 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LK03_RS08210 PF04055 Radical SAM superfamily LK03_RS08215 PF02016 LD-carboxypeptidase N-terminal domain LK03_RS08215 PF17676 LD-carboxypeptidase C-terminal domain LK03_RS08220 PF13406 Transglycosylase SLT domain LK03_RS08240 PF09334 tRNA synthetases class I (M) LK03_RS08240 PF00133 tRNA synthetases class I (I, L, M and V) LK03_RS08240 PF13603 Leucyl-tRNA synthetase, Domain 2 LK03_RS08240 PF08264 Anticodon-binding domain of tRNA LK03_RS08250 PF02698 DUF218 domain LK03_RS08255 PF00795 Carbon-nitrogen hydrolase LK03_RS08260 PF03471 Transporter associated domain LK03_RS08260 PF00571 CBS domain LK03_RS08265 PF02130 Uncharacterized protein family UPF0054 LK03_RS08270 PF02562 PhoH-like protein LK03_RS08285 PF00202 Aminotransferase class-III LK03_RS08290 PF02581 Thiamine monophosphate synthase LK03_RS08295 PF08543 Phosphomethylpyrimidine kinase LK03_RS08300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS08300 PF00072 Response regulator receiver domain LK03_RS08300 PF00672 HAMP domain LK03_RS08300 PF01627 Hpt domain LK03_RS08300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS08300 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS08305 PF18158 Adaptive response protein AidB N-terminal domain LK03_RS08305 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS08305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS08310 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus LK03_RS08310 PF01048 Phosphorylase superfamily LK03_RS08315 PF00849 RNA pseudouridylate synthase LK03_RS08325 PF01037 Lrp/AsnC ligand binding domain LK03_RS08325 PF13404 AsnC-type helix-turn-helix domain LK03_RS08335 PF00012 Hsp70 protein LK03_RS08340 PF00226 DnaJ domain LK03_RS08340 PF01556 DnaJ C terminal domain LK03_RS08355 PF00324 Amino acid permease LK03_RS08365 PF00593 TonB dependent receptor LK03_RS08365 PF07715 TonB-dependent Receptor Plug Domain LK03_RS08385 PF01145 SPFH domain / Band 7 family LK03_RS08385 PF16200 C-terminal region of band_7 LK03_RS08395 PF02571 Precorrin-6x reductase CbiJ/CobK LK03_RS08400 PF01888 CbiD LK03_RS08405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS08410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LK03_RS08410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK03_RS08415 PF02570 Precorrin-8X methylmutase LK03_RS08420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS08425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS08440 PF01627 Hpt domain LK03_RS08440 PF00072 Response regulator receiver domain LK03_RS08440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS08440 PF00672 HAMP domain LK03_RS08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS08440 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS08445 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LK03_RS08445 PF02843 Phosphoribosylglycinamide synthetase, C domain LK03_RS08445 PF02844 Phosphoribosylglycinamide synthetase, N domain LK03_RS08450 PF01808 AICARFT/IMPCHase bienzyme LK03_RS08450 PF02142 MGS-like domain LK03_RS08455 PF02954 Bacterial regulatory protein, Fis family LK03_RS08460 PF01207 Dihydrouridine synthase (Dus) LK03_RS08480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK03_RS08480 PF02785 Biotin carboxylase C-terminal domain LK03_RS08480 PF00289 Biotin carboxylase, N-terminal domain LK03_RS08485 PF00364 Biotin-requiring enzyme LK03_RS08490 PF01220 Dehydroquinase class II LK03_RS08495 PF02683 Cytochrome C biogenesis protein transmembrane region LK03_RS08495 PF11412 Disulphide bond corrector protein DsbC LK03_RS08500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS08505 PF00563 EAL domain LK03_RS08505 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS08505 PF00072 Response regulator receiver domain LK03_RS08515 PF00293 NUDIX domain LK03_RS08520 PF01253 Translation initiation factor SUI1 LK03_RS08525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LK03_RS08525 PF17810 Arginine decarboxylase helical bundle domain LK03_RS08525 PF17944 Arginine decarboxylase C-terminal helical extension LK03_RS08530 PF01554 MatE LK03_RS08535 PF07678 A-macroglobulin TED domain LK03_RS08535 PF00207 Alpha-2-macroglobulin family LK03_RS08535 PF01835 MG2 domain LK03_RS08535 PF17962 Bacterial macroglobulin domain 6 LK03_RS08535 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LK03_RS08535 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LK03_RS08535 PF07703 Alpha-2-macroglobulin bait region domain LK03_RS08535 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LK03_RS08535 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LK03_RS08545 PF06832 Penicillin-Binding Protein C-terminus Family LK03_RS08545 PF00905 Penicillin binding protein transpeptidase domain LK03_RS08545 PF00912 Transglycosylase LK03_RS08550 PF00196 Bacterial regulatory proteins, luxR family LK03_RS08550 PF00072 Response regulator receiver domain LK03_RS08570 PF13847 Methyltransferase domain LK03_RS08580 PF01575 MaoC like domain LK03_RS08590 PF02803 Thiolase, C-terminal domain LK03_RS08590 PF00108 Thiolase, N-terminal domain LK03_RS08600 PF00440 Bacterial regulatory proteins, tetR family LK03_RS08605 PF00672 HAMP domain LK03_RS08605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS08610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS08610 PF17200 Single Cache domain 2 LK03_RS08610 PF00672 HAMP domain LK03_RS08615 PF00376 MerR family regulatory protein LK03_RS08615 PF09278 MerR, DNA binding LK03_RS08620 PF00403 Heavy-metal-associated domain LK03_RS08635 PF07690 Major Facilitator Superfamily LK03_RS08645 PF00962 Adenosine/AMP deaminase LK03_RS08650 PF01979 Amidohydrolase family LK03_RS08655 PF00106 short chain dehydrogenase LK03_RS08660 PF09186 Domain of unknown function (DUF1949) LK03_RS08660 PF01205 Uncharacterized protein family UPF0029 LK03_RS08665 PF08362 YcdC-like protein, C-terminal region LK03_RS08665 PF00440 Bacterial regulatory proteins, tetR family LK03_RS08670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS08670 PF03466 LysR substrate binding domain LK03_RS08675 PF00202 Aminotransferase class-III LK03_RS08680 PF00171 Aldehyde dehydrogenase family LK03_RS08710 PF17946 RecC C-terminal domain LK03_RS08715 PF13361 UvrD-like helicase C-terminal domain LK03_RS08715 PF00580 UvrD/REP helicase N-terminal domain LK03_RS08715 PF12705 PD-(D/E)XK nuclease superfamily LK03_RS08720 PF13538 UvrD-like helicase C-terminal domain LK03_RS08725 PF03412 Peptidase C39 family LK03_RS08725 PF00664 ABC transporter transmembrane region LK03_RS08725 PF00005 ABC transporter LK03_RS08735 PF00082 Subtilase family LK03_RS08740 PF00664 ABC transporter transmembrane region LK03_RS08740 PF00005 ABC transporter LK03_RS08740 PF03412 Peptidase C39 family LK03_RS08755 PF00171 Aldehyde dehydrogenase family LK03_RS08760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK03_RS08760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK03_RS08785 PF00782 Dual specificity phosphatase, catalytic domain LK03_RS08790 PF12147 Putative methyltransferase LK03_RS08790 PF12146 Serine aminopeptidase, S33 LK03_RS08795 PF01066 CDP-alcohol phosphatidyltransferase LK03_RS08805 PF02525 Flavodoxin-like fold LK03_RS08810 PF03466 LysR substrate binding domain LK03_RS08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS08820 PF00672 HAMP domain LK03_RS08820 PF16591 Helical bimodular sensor domain LK03_RS08820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS08825 PF04228 Putative neutral zinc metallopeptidase LK03_RS08830 PF05958 tRNA (Uracil-5-)-methyltransferase LK03_RS08835 PF00860 Permease family LK03_RS08845 PF01654 Cytochrome bd terminal oxidase subunit I LK03_RS08850 PF02322 Cytochrome bd terminal oxidase subunit II LK03_RS08860 PF05175 Methyltransferase small domain LK03_RS08865 PF03472 Autoinducer binding domain LK03_RS08865 PF00196 Bacterial regulatory proteins, luxR family LK03_RS08870 PF00970 Oxidoreductase FAD-binding domain LK03_RS08870 PF00175 Oxidoreductase NAD-binding domain LK03_RS08875 PF01741 Large-conductance mechanosensitive channel, MscL LK03_RS08880 PF18073 Rubredoxin metal binding domain LK03_RS08885 PF00860 Permease family LK03_RS08890 PF07238 PilZ domain LK03_RS08895 PF02554 Carbon starvation protein CstA LK03_RS08895 PF13722 5TM C-terminal transporter carbon starvation CstA LK03_RS08900 PF04328 Selenoprotein, putative LK03_RS08905 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS08905 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS08910 PF00155 Aminotransferase class I and II LK03_RS08915 PF00464 Serine hydroxymethyltransferase LK03_RS08920 PF00563 EAL domain LK03_RS08920 PF03707 Bacterial signalling protein N terminal repeat LK03_RS08920 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS08930 PF12848 ABC transporter LK03_RS08930 PF00005 ABC transporter LK03_RS08935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK03_RS08935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK03_RS08940 PF03449 Transcription elongation factor, N-terminal LK03_RS08940 PF01272 Transcription elongation factor, GreA/GreB, C-term LK03_RS08955 PF05362 Lon protease (S16) C-terminal proteolytic domain LK03_RS08955 PF13654 AAA domain LK03_RS08965 PF03350 Uncharacterized protein family, UPF0114 LK03_RS08975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS08975 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LK03_RS08985 PF08274 PhnA Zinc-Ribbon LK03_RS08985 PF03831 PhnA domain LK03_RS08990 PF00348 Polyprenyl synthetase LK03_RS08995 PF00829 Ribosomal prokaryotic L21 protein LK03_RS09000 PF01016 Ribosomal L27 protein LK03_RS09005 PF01018 GTP1/OBG LK03_RS09005 PF01926 50S ribosome-binding GTPase LK03_RS09010 PF00696 Amino acid kinase family LK03_RS09010 PF01472 PUA domain LK03_RS09015 PF05981 CreA protein LK03_RS09040 PF00583 Acetyltransferase (GNAT) family LK03_RS09045 PF11254 Protein of unknown function (DUF3053) LK03_RS09050 PF07715 TonB-dependent Receptor Plug Domain LK03_RS09050 PF07660 Secretin and TonB N terminus short domain LK03_RS09050 PF00593 TonB dependent receptor LK03_RS09060 PF04542 Sigma-70 region 2 LK03_RS09060 PF08281 Sigma-70, region 4 LK03_RS09075 PF07690 Major Facilitator Superfamily LK03_RS09085 PF07715 TonB-dependent Receptor Plug Domain LK03_RS09085 PF07660 Secretin and TonB N terminus short domain LK03_RS09085 PF00593 TonB dependent receptor LK03_RS09095 PF08281 Sigma-70, region 4 LK03_RS09095 PF04542 Sigma-70 region 2 LK03_RS09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS09100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LK03_RS09100 PF13247 4Fe-4S dicluster domain LK03_RS09105 PF00850 Histone deacetylase domain LK03_RS09110 PF13302 Acetyltransferase (GNAT) domain LK03_RS09120 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS09130 PF01032 FecCD transport family LK03_RS09135 PF00005 ABC transporter LK03_RS09155 PF08019 Phosphoethanolamine transferase EptA/EptB LK03_RS09155 PF00884 Sulfatase LK03_RS09180 PF06071 Protein of unknown function (DUF933) LK03_RS09180 PF01926 50S ribosome-binding GTPase LK03_RS09185 PF01195 Peptidyl-tRNA hydrolase LK03_RS09190 PF14693 Ribosomal protein TL5, C-terminal domain LK03_RS09190 PF01386 Ribosomal L25p family LK03_RS09195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LK03_RS09195 PF14572 Phosphoribosyl synthetase-associated domain LK03_RS09205 PF00288 GHMP kinases N terminal domain LK03_RS09205 PF08544 GHMP kinases C terminal LK03_RS09210 PF03550 Outer membrane lipoprotein LolB LK03_RS09230 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LK03_RS09230 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LK03_RS09230 PF01488 Shikimate / quinate 5-dehydrogenase LK03_RS09235 PF00472 RF-1 domain LK03_RS09235 PF03462 PCRF domain LK03_RS09240 PF05175 Methyltransferase small domain LK03_RS09240 PF17827 PrmC N-terminal domain LK03_RS09245 PF00899 ThiF family LK03_RS09250 PF01177 Asp/Glu/Hydantoin racemase LK03_RS09255 PF09411 Lipid A 3-O-deacylase (PagL) LK03_RS09265 PF00875 DNA photolyase LK03_RS09265 PF03441 FAD binding domain of DNA photolyase LK03_RS09270 PF13411 MerR HTH family regulatory protein LK03_RS09275 PF08349 Protein of unknown function (DUF1722) LK03_RS09280 PF01593 Flavin containing amine oxidoreductase LK03_RS09285 PF01370 NAD dependent epimerase/dehydratase family LK03_RS09285 PF08338 Domain of unknown function (DUF1731) LK03_RS09290 PF00762 Ferrochelatase LK03_RS09295 PF00860 Permease family LK03_RS09305 PF00156 Phosphoribosyl transferase domain LK03_RS09320 PF06039 Malate:quinone oxidoreductase (Mqo) LK03_RS09355 PF02586 SOS response associated peptidase (SRAP) LK03_RS09365 PF01169 Uncharacterized protein family UPF0016 LK03_RS09370 PF05175 Methyltransferase small domain LK03_RS09370 PF08468 Methyltransferase small domain N-terminal LK03_RS09375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS09375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS09380 PF13193 AMP-binding enzyme C-terminal domain LK03_RS09380 PF00501 AMP-binding enzyme LK03_RS09390 PF07044 Protein of unknown function (DUF1329) LK03_RS09410 PF00691 OmpA family LK03_RS09410 PF13488 Glycine zipper LK03_RS09415 PF01515 Phosphate acetyl/butaryl transferase LK03_RS09415 PF07085 DRTGG domain LK03_RS09425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS09430 PF00255 Glutathione peroxidase LK03_RS09435 PF13439 Glycosyltransferase Family 4 LK03_RS09435 PF00534 Glycosyl transferases group 1 LK03_RS09440 PF08447 PAS fold LK03_RS09440 PF13426 PAS domain LK03_RS09440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS09465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LK03_RS09465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LK03_RS09475 PF01510 N-acetylmuramoyl-L-alanine amidase LK03_RS09485 PF01026 TatD related DNase LK03_RS09490 PF00356 Bacterial regulatory proteins, lacI family LK03_RS09490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LK03_RS09495 PF02896 PEP-utilising enzyme, TIM barrel domain LK03_RS09495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LK03_RS09495 PF00391 PEP-utilising enzyme, mobile domain LK03_RS09495 PF05524 PEP-utilising enzyme, N-terminal LK03_RS09495 PF00381 PTS HPr component phosphorylation site LK03_RS09500 PF00294 pfkB family carbohydrate kinase LK03_RS09505 PF02378 Phosphotransferase system, EIIC LK03_RS09505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LK03_RS09510 PF12843 Putative quorum-sensing-regulated virulence factor LK03_RS09520 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS09520 PF00563 EAL domain LK03_RS09520 PF01590 GAF domain LK03_RS09520 PF00360 Phytochrome region LK03_RS09525 PF03573 outer membrane porin, OprD family LK03_RS09545 PF01584 CheW-like domain LK03_RS09545 PF00072 Response regulator receiver domain LK03_RS09550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS09550 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS09555 PF03412 Peptidase C39 family LK03_RS09555 PF00005 ABC transporter LK03_RS09555 PF00664 ABC transporter transmembrane region LK03_RS09570 PF02954 Bacterial regulatory protein, Fis family LK03_RS09570 PF00158 Sigma-54 interaction domain LK03_RS09575 PF00970 Oxidoreductase FAD-binding domain LK03_RS09575 PF00175 Oxidoreductase NAD-binding domain LK03_RS09575 PF00042 Globin LK03_RS09585 PF02803 Thiolase, C-terminal domain LK03_RS09585 PF00108 Thiolase, N-terminal domain LK03_RS09590 PF12241 Trans-2-enoyl-CoA reductase catalytic region LK03_RS09590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LK03_RS09590 PF07055 Enoyl reductase FAD binding domain LK03_RS09615 PF13411 MerR HTH family regulatory protein LK03_RS09625 PF01740 STAS domain LK03_RS09625 PF13426 PAS domain LK03_RS09630 PF00258 Flavodoxin LK03_RS09635 PF12697 Alpha/beta hydrolase family LK03_RS09645 PF04209 homogentisate 1,2-dioxygenase LK03_RS09655 PF13417 Glutathione S-transferase, N-terminal domain LK03_RS09660 PF13369 Transglutaminase-like superfamily LK03_RS09665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LK03_RS09665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LK03_RS09670 PF07690 Major Facilitator Superfamily LK03_RS09680 PF06146 Phosphate-starvation-inducible E LK03_RS09715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS09715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS09720 PF03466 LysR substrate binding domain LK03_RS09725 PF02321 Outer membrane efflux protein LK03_RS09730 PF04632 Fusaric acid resistance protein family LK03_RS09740 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS09740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS09750 PF03466 LysR substrate binding domain LK03_RS09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS09755 PF07690 Major Facilitator Superfamily LK03_RS09760 PF13533 Biotin-lipoyl like LK03_RS09765 PF02321 Outer membrane efflux protein LK03_RS09770 PF00106 short chain dehydrogenase LK03_RS09785 PF03883 Peroxide stress protein YaaA LK03_RS09795 PF02562 PhoH-like protein LK03_RS09795 PF13638 PIN domain LK03_RS09800 PF01967 MoaC family LK03_RS09805 PF02597 ThiS family LK03_RS09810 PF02391 MoaE protein LK03_RS09815 PF00270 DEAD/DEAH box helicase LK03_RS09815 PF00271 Helicase conserved C-terminal domain LK03_RS09820 PF02230 Phospholipase/Carboxylesterase LK03_RS09825 PF13180 PDZ domain LK03_RS09830 PF01784 NIF3 (NGG1p interacting factor 3) LK03_RS09835 PF01507 Phosphoadenosine phosphosulfate reductase family LK03_RS09845 PF00009 Elongation factor Tu GTP binding domain LK03_RS09850 PF01037 Lrp/AsnC ligand binding domain LK03_RS09855 PF01053 Cys/Met metabolism PLP-dependent enzyme LK03_RS09870 PF00579 tRNA synthetases class I (W and Y) LK03_RS09875 PF03969 AFG1-like ATPase LK03_RS09890 PF00572 Ribosomal protein L13 LK03_RS09895 PF00380 Ribosomal protein S9/S16 LK03_RS09900 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LK03_RS09900 PF00355 Rieske [2Fe-2S] domain LK03_RS09905 PF00032 Cytochrome b(C-terminal)/b6/petD LK03_RS09905 PF00033 Cytochrome b/b6/petB LK03_RS09910 PF02167 Cytochrome C1 family LK03_RS09915 PF02798 Glutathione S-transferase, N-terminal domain LK03_RS09915 PF00043 Glutathione S-transferase, C-terminal domain LK03_RS09920 PF04386 Stringent starvation protein B LK03_RS09925 PF04972 BON domain LK03_RS09930 PF13580 SIS domain LK03_RS09940 PF04348 LppC putative lipoprotein LK03_RS09945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS09950 PF02381 MraZ protein, putative antitoxin-like LK03_RS09955 PF01795 MraW methylase family LK03_RS09960 PF04999 Cell division protein FtsL LK03_RS09965 PF00905 Penicillin binding protein transpeptidase domain LK03_RS09965 PF03717 Penicillin-binding Protein dimerisation domain LK03_RS09970 PF08245 Mur ligase middle domain LK03_RS09970 PF02875 Mur ligase family, glutamate ligase domain LK03_RS09970 PF01225 Mur ligase family, catalytic domain LK03_RS09975 PF08245 Mur ligase middle domain LK03_RS09975 PF01225 Mur ligase family, catalytic domain LK03_RS09975 PF02875 Mur ligase family, glutamate ligase domain LK03_RS09980 PF00953 Glycosyl transferase family 4 LK03_RS09980 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LK03_RS09985 PF02875 Mur ligase family, glutamate ligase domain LK03_RS09985 PF08245 Mur ligase middle domain LK03_RS09990 PF01098 Cell cycle protein LK03_RS09995 PF03033 Glycosyltransferase family 28 N-terminal domain LK03_RS09995 PF04101 Glycosyltransferase family 28 C-terminal domain LK03_RS10000 PF08245 Mur ligase middle domain LK03_RS10000 PF01225 Mur ligase family, catalytic domain LK03_RS10000 PF02875 Mur ligase family, glutamate ligase domain LK03_RS10005 PF07478 D-ala D-ala ligase C-terminus LK03_RS10005 PF01820 D-ala D-ala ligase N-terminus LK03_RS10010 PF03799 Cell division protein FtsQ LK03_RS10010 PF08478 POTRA domain, FtsQ-type LK03_RS10015 PF02491 SHS2 domain inserted in FTSA LK03_RS10020 PF00091 Tubulin/FtsZ family, GTPase domain LK03_RS10020 PF12327 FtsZ family, C-terminal domain LK03_RS10025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LK03_RS10035 PF07517 SecA DEAD-like domain LK03_RS10035 PF02810 SEC-C motif LK03_RS10035 PF07516 SecA Wing and Scaffold domain LK03_RS10035 PF01043 SecA preprotein cross-linking domain LK03_RS10040 PF01960 ArgJ family LK03_RS10050 PF02581 Thiamine monophosphate synthase LK03_RS10055 PF01923 Cobalamin adenosyltransferase LK03_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS10060 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS10060 PF08448 PAS fold LK03_RS10060 PF13188 PAS domain LK03_RS10060 PF00072 Response regulator receiver domain LK03_RS10065 PF02558 Ketopantoate reductase PanE/ApbA LK03_RS10065 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK03_RS10070 PF04461 Protein of unknown function (DUF520) LK03_RS10075 PF00924 Mechanosensitive ion channel LK03_RS10075 PF05552 Conserved TM helix LK03_RS10080 PF07690 Major Facilitator Superfamily LK03_RS10085 PF07690 Major Facilitator Superfamily LK03_RS10090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK03_RS10090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK03_RS10105 PF04186 FxsA cytoplasmic membrane protein LK03_RS10110 PF00166 Chaperonin 10 Kd subunit LK03_RS10115 PF00118 TCP-1/cpn60 chaperonin family LK03_RS10120 PF00072 Response regulator receiver domain LK03_RS10120 PF00486 Transcriptional regulatory protein, C terminal LK03_RS10125 PF08521 Two-component sensor kinase N-terminal LK03_RS10125 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS10145 PF04364 DNA polymerase III chi subunit, HolC LK03_RS10150 PF00883 Cytosol aminopeptidase family, catalytic domain LK03_RS10150 PF02789 Cytosol aminopeptidase family, N-terminal domain LK03_RS10155 PF03739 Lipopolysaccharide export system permease LptF/LptG LK03_RS10160 PF03739 Lipopolysaccharide export system permease LptF/LptG LK03_RS10170 PF00313 'Cold-shock' DNA-binding domain LK03_RS10175 PF01571 Aminomethyltransferase folate-binding domain LK03_RS10175 PF08669 Glycine cleavage T-protein C-terminal barrel domain LK03_RS10180 PF02347 Glycine cleavage system P-protein LK03_RS10185 PF01597 Glycine cleavage H-protein LK03_RS10190 PF00324 Amino acid permease LK03_RS10195 PF18024 Helix-turn-helix domain LK03_RS10195 PF00158 Sigma-54 interaction domain LK03_RS10205 PF04304 Protein of unknown function (DUF454) LK03_RS10210 PF01126 Heme oxygenase LK03_RS10215 PF00593 TonB dependent receptor LK03_RS10215 PF07715 TonB-dependent Receptor Plug Domain LK03_RS10225 PF08281 Sigma-70, region 4 LK03_RS10225 PF04542 Sigma-70 region 2 LK03_RS10230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK03_RS10230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK03_RS10235 PF00920 Dehydratase family LK03_RS10240 PF02685 Glucokinase LK03_RS10245 PF00486 Transcriptional regulatory protein, C terminal LK03_RS10245 PF00072 Response regulator receiver domain LK03_RS10250 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS10250 PF00672 HAMP domain LK03_RS10255 PF01547 Bacterial extracellular solute-binding protein LK03_RS10260 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS10265 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS10270 PF17912 MalK OB fold domain LK03_RS10270 PF03459 TOBE domain LK03_RS10270 PF00005 ABC transporter LK03_RS10275 PF04966 Carbohydrate-selective porin, OprB family LK03_RS10280 PF01263 Aldose 1-epimerase LK03_RS10285 PF01380 SIS domain LK03_RS10285 PF01418 Helix-turn-helix domain, rpiR family LK03_RS10290 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LK03_RS10290 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LK03_RS10295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LK03_RS10300 PF01081 KDPG and KHG aldolase LK03_RS10315 PF00682 HMGL-like LK03_RS10315 PF08502 LeuA allosteric (dimerisation) domain LK03_RS10320 PF01551 Peptidase family M23 LK03_RS10320 PF01476 LysM domain LK03_RS10320 PF08525 Opacity-associated protein A N-terminal motif LK03_RS10325 PF13742 OB-fold nucleic acid binding domain LK03_RS10325 PF02601 Exonuclease VII, large subunit LK03_RS10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS10330 PF03466 LysR substrate binding domain LK03_RS10345 PF00571 CBS domain LK03_RS10345 PF00478 IMP dehydrogenase / GMP reductase domain LK03_RS10350 PF00958 GMP synthase C terminal domain LK03_RS10350 PF02540 NAD synthase LK03_RS10350 PF00117 Glutamine amidotransferase class-I LK03_RS10365 PF07690 Major Facilitator Superfamily LK03_RS10370 PF07715 TonB-dependent Receptor Plug Domain LK03_RS10370 PF00593 TonB dependent receptor LK03_RS10375 PF00155 Aminotransferase class I and II LK03_RS10400 PF00593 TonB dependent receptor LK03_RS10400 PF07660 Secretin and TonB N terminus short domain LK03_RS10400 PF07715 TonB-dependent Receptor Plug Domain LK03_RS10415 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal LK03_RS10415 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal LK03_RS10420 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS10420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS10425 PF01212 Beta-eliminating lyase LK03_RS10440 PF03466 LysR substrate binding domain LK03_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS10445 PF00593 TonB dependent receptor LK03_RS10445 PF07715 TonB-dependent Receptor Plug Domain LK03_RS10450 PF00664 ABC transporter transmembrane region LK03_RS10450 PF00005 ABC transporter LK03_RS10455 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS10475 PF02661 Fic/DOC family LK03_RS10480 PF00083 Sugar (and other) transporter LK03_RS10485 PF00158 Sigma-54 interaction domain LK03_RS10485 PF02954 Bacterial regulatory protein, Fis family LK03_RS10485 PF00072 Response regulator receiver domain LK03_RS10490 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS10495 PF01915 Glycosyl hydrolase family 3 C-terminal domain LK03_RS10495 PF00933 Glycosyl hydrolase family 3 N terminal domain LK03_RS10495 PF14310 Fibronectin type III-like domain LK03_RS10520 PF01740 STAS domain LK03_RS10520 PF00916 Sulfate permease family LK03_RS10530 PF01425 Amidase LK03_RS10535 PF01522 Polysaccharide deacetylase LK03_RS10560 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS10560 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS10575 PF00561 alpha/beta hydrolase fold LK03_RS10580 PF00849 RNA pseudouridylate synthase LK03_RS10580 PF01479 S4 domain LK03_RS10590 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS10605 PF03167 Uracil DNA glycosylase superfamily LK03_RS10610 PF05145 Transition state regulatory protein AbrB LK03_RS10615 PF01970 Tripartite tricarboxylate transporter TctA family LK03_RS10630 PF03573 outer membrane porin, OprD family LK03_RS10635 PF00486 Transcriptional regulatory protein, C terminal LK03_RS10635 PF00072 Response regulator receiver domain LK03_RS10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS10640 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS10650 PF01571 Aminomethyltransferase folate-binding domain LK03_RS10655 PF03937 Flavinator of succinate dehydrogenase LK03_RS10665 PF02910 Fumarate reductase flavoprotein C-term LK03_RS10665 PF00890 FAD binding domain LK03_RS10670 PF08281 Sigma-70, region 4 LK03_RS10670 PF04542 Sigma-70 region 2 LK03_RS10675 PF03873 Anti sigma-E protein RseA, C-terminal domain LK03_RS10675 PF03872 Anti sigma-E protein RseA, N-terminal domain LK03_RS10680 PF17188 MucB/RseB C-terminal domain LK03_RS10680 PF03888 MucB/RseB N-terminal domain LK03_RS10685 PF13180 PDZ domain LK03_RS10690 PF00009 Elongation factor Tu GTP binding domain LK03_RS10690 PF03144 Elongation factor Tu domain 2 LK03_RS10690 PF00679 Elongation factor G C-terminus LK03_RS10690 PF06421 GTP-binding protein LepA C-terminus LK03_RS10695 PF10502 Signal peptidase, peptidase S26 LK03_RS10700 PF14622 Ribonuclease-III-like LK03_RS10700 PF00035 Double-stranded RNA binding motif LK03_RS10705 PF01926 50S ribosome-binding GTPase LK03_RS10705 PF07650 KH domain LK03_RS10710 PF02565 Recombination protein O C terminal LK03_RS10710 PF11967 Recombination protein O N terminal LK03_RS10715 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LK03_RS10725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS10730 PF00873 AcrB/AcrD/AcrF family LK03_RS10750 PF01553 Acyltransferase LK03_RS10755 PF00313 'Cold-shock' DNA-binding domain LK03_RS10765 PF13847 Methyltransferase domain LK03_RS10770 PF07687 Peptidase dimerisation domain LK03_RS10770 PF01546 Peptidase family M20/M25/M40 LK03_RS10775 PF00535 Glycosyl transferase family 2 LK03_RS10775 PF07238 PilZ domain LK03_RS10775 PF03552 Cellulose synthase LK03_RS10780 PF00899 ThiF family LK03_RS10785 PF02657 Fe-S metabolism associated domain LK03_RS10790 PF00266 Aminotransferase class-V LK03_RS10795 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LK03_RS10795 PF14602 Hexapeptide repeat of succinyl-transferase LK03_RS10800 PF03960 ArsC family LK03_RS10805 PF00999 Sodium/hydrogen exchanger family LK03_RS10810 PF00155 Aminotransferase class I and II LK03_RS10815 PF01966 HD domain LK03_RS10815 PF01909 Nucleotidyltransferase domain LK03_RS10815 PF08335 GlnD PII-uridylyltransferase LK03_RS10815 PF01842 ACT domain LK03_RS10820 PF00557 Metallopeptidase family M24 LK03_RS10825 PF00318 Ribosomal protein S2 LK03_RS10830 PF00889 Elongation factor TS LK03_RS10835 PF00696 Amino acid kinase family LK03_RS10840 PF01765 Ribosome recycling factor LK03_RS10845 PF01255 Putative undecaprenyl diphosphate synthase LK03_RS10855 PF13288 DXP reductoisomerase C-terminal domain LK03_RS10855 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LK03_RS10855 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LK03_RS10860 PF02163 Peptidase family M50 LK03_RS10860 PF13180 PDZ domain LK03_RS10860 PF17820 PDZ domain LK03_RS10865 PF01103 Surface antigen LK03_RS10865 PF07244 Surface antigen variable number repeat LK03_RS10870 PF03938 Outer membrane protein (OmpH-like) LK03_RS10875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LK03_RS10875 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS10880 PF07977 FabA-like domain LK03_RS10885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LK03_RS10885 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS10890 PF02684 Lipid-A-disaccharide synthetase LK03_RS10895 PF01351 Ribonuclease HII LK03_RS10900 PF02811 PHP domain LK03_RS10900 PF14579 Helix-hairpin-helix motif LK03_RS10900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK03_RS10900 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK03_RS10900 PF01336 OB-fold nucleic acid binding domain LK03_RS10905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LK03_RS10910 PF11734 TilS substrate C-terminal domain LK03_RS10910 PF01171 PP-loop family LK03_RS10910 PF09179 TilS substrate binding domain LK03_RS10915 PF06418 CTP synthase N-terminus LK03_RS10915 PF00117 Glutamine amidotransferase class-I LK03_RS10920 PF03952 Enolase, N-terminal domain LK03_RS10920 PF00113 Enolase, C-terminal TIM barrel domain LK03_RS10925 PF04977 Septum formation initiator LK03_RS10930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LK03_RS10935 PF03466 LysR substrate binding domain LK03_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS10940 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS10940 PF00107 Zinc-binding dehydrogenase LK03_RS10945 PF00756 Putative esterase LK03_RS10950 PF02542 YgbB family LK03_RS10955 PF01142 tRNA pseudouridine synthase D (TruD) LK03_RS10960 PF01975 Survival protein SurE LK03_RS10970 PF01551 Peptidase family M23 LK03_RS10970 PF01476 LysM domain LK03_RS10975 PF00140 Sigma-70 factor, region 1.2 LK03_RS10975 PF04542 Sigma-70 region 2 LK03_RS10975 PF04539 Sigma-70 region 3 LK03_RS10975 PF04545 Sigma-70, region 4 LK03_RS10980 PF11953 Domain of unknown function (DUF3470) LK03_RS10980 PF00037 4Fe-4S binding domain LK03_RS10985 PF01624 MutS domain I LK03_RS10985 PF05190 MutS family domain IV LK03_RS10985 PF00488 MutS domain V LK03_RS10985 PF05192 MutS domain III LK03_RS10985 PF05188 MutS domain II LK03_RS10990 PF02464 Competence-damaged protein LK03_RS10995 PF00154 recA bacterial DNA recombination protein LK03_RS11000 PF02631 RecX family LK03_RS11015 PF03942 DTW domain LK03_RS11020 PF00072 Response regulator receiver domain LK03_RS11020 PF00196 Bacterial regulatory proteins, luxR family LK03_RS11025 PF01219 Prokaryotic diacylglycerol kinase LK03_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS11030 PF03466 LysR substrate binding domain LK03_RS11035 PF00970 Oxidoreductase FAD-binding domain LK03_RS11035 PF00175 Oxidoreductase NAD-binding domain LK03_RS11040 PF01980 tRNA-methyltransferase O LK03_RS11040 PF18389 TrmO C-terminal domain LK03_RS11045 PF07308 Protein of unknown function (DUF1456) LK03_RS11060 PF00919 Uncharacterized protein family UPF0004 LK03_RS11060 PF18693 TRAM domain LK03_RS11060 PF04055 Radical SAM superfamily LK03_RS11065 PF02705 K+ potassium transporter LK03_RS11075 PF09924 Uncharacterised conserved protein (DUF2156) LK03_RS11075 PF03706 Lysylphosphatidylglycerol synthase TM region LK03_RS11095 PF00817 impB/mucB/samB family LK03_RS11095 PF11798 IMS family HHH motif LK03_RS11105 PF03129 Anticodon binding domain LK03_RS11105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK03_RS11105 PF04073 Aminoacyl-tRNA editing domain LK03_RS11110 PF03573 outer membrane porin, OprD family LK03_RS11120 PF04102 SlyX LK03_RS11125 PF00313 'Cold-shock' DNA-binding domain LK03_RS11130 PF00210 Ferritin-like domain LK03_RS11145 PF02938 GAD domain LK03_RS11145 PF00152 tRNA synthetases class II (D, K and N) LK03_RS11145 PF01336 OB-fold nucleic acid binding domain LK03_RS11150 PF01709 Transcriptional regulator LK03_RS11155 PF02075 Crossover junction endodeoxyribonuclease RuvC LK03_RS11160 PF07499 RuvA, C-terminal domain LK03_RS11160 PF01330 RuvA N terminal domain LK03_RS11165 PF05491 RuvB C-terminal winged helix domain LK03_RS11165 PF05496 Holliday junction DNA helicase RuvB P-loop domain LK03_RS11165 PF17864 RuvB AAA lid domain LK03_RS11170 PF03061 Thioesterase superfamily LK03_RS11175 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS11180 PF02472 Biopolymer transport protein ExbD/TolR LK03_RS11190 PF04052 TolB amino-terminal domain LK03_RS11190 PF07676 WD40-like Beta Propeller Repeat LK03_RS11195 PF00691 OmpA family LK03_RS11200 PF13525 Outer membrane lipoprotein LK03_RS11200 PF16331 TolA binding protein trimerisation LK03_RS11205 PF04055 Radical SAM superfamily LK03_RS11210 PF06508 Queuosine biosynthesis protein QueC LK03_RS11220 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS11225 PF06912 Protein of unknown function (DUF1275) LK03_RS11230 PF07690 Major Facilitator Superfamily LK03_RS11235 PF00893 Small Multidrug Resistance protein LK03_RS11240 PF01758 Sodium Bile acid symporter family LK03_RS11245 PF04381 Putative exonuclease, RdgC LK03_RS11265 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK03_RS11270 PF00899 ThiF family LK03_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS11295 PF03466 LysR substrate binding domain LK03_RS11300 PF00012 Hsp70 protein LK03_RS11315 PF00557 Metallopeptidase family M24 LK03_RS11325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LK03_RS11325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS11330 PF06803 Protein of unknown function (DUF1232) LK03_RS11345 PF11818 C-terminal domain of tail specific protease (DUF3340) LK03_RS11345 PF03572 Peptidase family S41 LK03_RS11345 PF17804 Tail specific protease N-terminal domain LK03_RS11345 PF00595 PDZ domain LK03_RS11350 PF00698 Acyl transferase domain LK03_RS11350 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS11350 PF08659 KR domain LK03_RS11350 PF14765 Polyketide synthase dehydratase LK03_RS11350 PF00550 Phosphopantetheine attachment site LK03_RS11350 PF16197 Ketoacyl-synthetase C-terminal extension LK03_RS11350 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS11350 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS11360 PF00005 ABC transporter LK03_RS11360 PF08402 TOBE domain LK03_RS11385 PF07702 UTRA domain LK03_RS11385 PF00392 Bacterial regulatory proteins, gntR family LK03_RS11390 PF00924 Mechanosensitive ion channel LK03_RS11395 PF00849 RNA pseudouridylate synthase LK03_RS11400 PF03776 Septum formation topological specificity factor MinE LK03_RS11405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LK03_RS11410 PF05209 Septum formation inhibitor MinC, N-terminal domain LK03_RS11410 PF03775 Septum formation inhibitor MinC, C-terminal domain LK03_RS11415 PF03279 Bacterial lipid A biosynthesis acyltransferase LK03_RS11420 PF04333 MlaA lipoprotein LK03_RS11440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LK03_RS11445 PF01126 Heme oxygenase LK03_RS11455 PF02445 Quinolinate synthetase A protein LK03_RS11460 PF13181 Tetratricopeptide repeat LK03_RS11460 PF01435 Peptidase family M48 LK03_RS11465 PF01206 Sulfurtransferase TusA LK03_RS11470 PF01594 AI-2E family transporter LK03_RS11475 PF00578 AhpC/TSA family LK03_RS11485 PF00701 Dihydrodipicolinate synthetase family LK03_RS11490 PF06804 NlpB/DapX lipoprotein LK03_RS11495 PF00753 Metallo-beta-lactamase superfamily LK03_RS11500 PF01259 SAICAR synthetase LK03_RS11510 PF01738 Dienelactone hydrolase family LK03_RS11520 PF00486 Transcriptional regulatory protein, C terminal LK03_RS11520 PF00072 Response regulator receiver domain LK03_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS11530 PF00375 Sodium:dicarboxylate symporter family LK03_RS11535 PF10263 SprT-like family LK03_RS11540 PF04893 Yip1 domain LK03_RS11545 PF01171 PP-loop family LK03_RS11565 PF03358 NADPH-dependent FMN reductase LK03_RS11570 PF03960 ArsC family LK03_RS11575 PF00085 Thioredoxin LK03_RS11590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS11590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS11595 PF00672 HAMP domain LK03_RS11595 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS11595 PF01627 Hpt domain LK03_RS11595 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS11595 PF00072 Response regulator receiver domain LK03_RS11600 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS11605 PF01938 TRAM domain LK03_RS11605 PF05958 tRNA (Uracil-5-)-methyltransferase LK03_RS11610 PF13291 ACT domain LK03_RS11610 PF04607 Region found in RelA / SpoT proteins LK03_RS11610 PF02824 TGS domain LK03_RS11615 PF03819 MazG nucleotide pyrophosphohydrolase domain LK03_RS11620 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LK03_RS11630 PF03594 Benzoate membrane transport protein LK03_RS11640 PF01227 GTP cyclohydrolase I LK03_RS11645 PF01713 Smr domain LK03_RS11655 PF05175 Methyltransferase small domain LK03_RS11670 PF01264 Chorismate synthase LK03_RS11675 PF12832 MFS_1 like family LK03_RS11680 PF03079 ARD/ARD' family LK03_RS11690 PF00023 Ankyrin repeat LK03_RS11690 PF12796 Ankyrin repeats (3 copies) LK03_RS11715 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS11735 PF00106 short chain dehydrogenase LK03_RS11740 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS11750 PF01979 Amidohydrolase family LK03_RS11755 PF01008 Initiation factor 2 subunit family LK03_RS11760 PF03989 DNA gyrase C-terminal domain, beta-propeller LK03_RS11760 PF00521 DNA gyrase/topoisomerase IV, subunit A LK03_RS11765 PF00266 Aminotransferase class-V LK03_RS11770 PF01817 Chorismate mutase type II LK03_RS11770 PF01842 ACT domain LK03_RS11770 PF00800 Prephenate dehydratase LK03_RS11775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LK03_RS11780 PF02224 Cytidylate kinase LK03_RS11785 PF00575 S1 RNA binding domain LK03_RS11790 PF00216 Bacterial DNA-binding protein LK03_RS11800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LK03_RS11800 PF00753 Metallo-beta-lactamase superfamily LK03_RS11800 PF10996 Beta-Casp domain LK03_RS11805 PF01370 NAD dependent epimerase/dehydratase family LK03_RS11810 PF00953 Glycosyl transferase family 4 LK03_RS11815 PF02719 Polysaccharide biosynthesis protein LK03_RS11820 PF16363 GDP-mannose 4,6 dehydratase LK03_RS11825 PF04321 RmlD substrate binding domain LK03_RS11830 PF00483 Nucleotidyl transferase LK03_RS11835 PF00535 Glycosyl transferase family 2 LK03_RS11845 PF00892 EamA-like transporter family LK03_RS11855 PF00535 Glycosyl transferase family 2 LK03_RS11860 PF00005 ABC transporter LK03_RS11870 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LK03_RS11875 PF00535 Glycosyl transferase family 2 LK03_RS11880 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS11880 PF00698 Acyl transferase domain LK03_RS11880 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS11880 PF16197 Ketoacyl-synthetase C-terminal extension LK03_RS11880 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS11880 PF14765 Polyketide synthase dehydratase LK03_RS11880 PF08659 KR domain LK03_RS11880 PF00550 Phosphopantetheine attachment site LK03_RS11885 PF00155 Aminotransferase class I and II LK03_RS11890 PF06039 Malate:quinone oxidoreductase (Mqo) LK03_RS11895 PF08212 Lipocalin-like domain LK03_RS11900 PF02127 Aminopeptidase I zinc metalloprotease (M18) LK03_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS11905 PF03466 LysR substrate binding domain LK03_RS11910 PF04055 Radical SAM superfamily LK03_RS11910 PF06463 Molybdenum Cofactor Synthesis C LK03_RS11915 PF01037 Lrp/AsnC ligand binding domain LK03_RS11915 PF13404 AsnC-type helix-turn-helix domain LK03_RS11920 PF01053 Cys/Met metabolism PLP-dependent enzyme LK03_RS11930 PF01612 3'-5' exonuclease LK03_RS11930 PF00570 HRDC domain LK03_RS11935 PF05166 YcgL domain LK03_RS11940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS11950 PF03692 Putative zinc- or iron-chelating domain LK03_RS11965 PF01844 HNH endonuclease LK03_RS11975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LK03_RS11975 PF00326 Prolyl oligopeptidase family LK03_RS11985 PF13230 Glutamine amidotransferases class-II LK03_RS11995 PF02535 ZIP Zinc transporter LK03_RS12005 PF00884 Sulfatase LK03_RS12025 PF02540 NAD synthase LK03_RS12025 PF00117 Glutamine amidotransferase class-I LK03_RS12025 PF00958 GMP synthase C terminal domain LK03_RS12045 PF07715 TonB-dependent Receptor Plug Domain LK03_RS12045 PF07660 Secretin and TonB N terminus short domain LK03_RS12045 PF00593 TonB dependent receptor LK03_RS12050 PF01329 Pterin 4 alpha carbinolamine dehydratase LK03_RS12055 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LK03_RS12060 PF00158 Sigma-54 interaction domain LK03_RS12060 PF18024 Helix-turn-helix domain LK03_RS12070 PF16177 Acetyl-coenzyme A synthetase N-terminus LK03_RS12070 PF00501 AMP-binding enzyme LK03_RS12070 PF13193 AMP-binding enzyme C-terminal domain LK03_RS12075 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS12085 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS12090 PF00005 ABC transporter LK03_RS12095 PF12833 Helix-turn-helix domain LK03_RS12100 PF00202 Aminotransferase class-III LK03_RS12105 PF04958 Arginine N-succinyltransferase beta subunit LK03_RS12110 PF04958 Arginine N-succinyltransferase beta subunit LK03_RS12115 PF00171 Aldehyde dehydrogenase family LK03_RS12120 PF04996 Succinylarginine dihydrolase LK03_RS12130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LK03_RS12135 PF02272 DHHA1 domain LK03_RS12135 PF01411 tRNA synthetases class II (A) LK03_RS12135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK03_RS12140 PF01842 ACT domain LK03_RS12140 PF13840 ACT domain LK03_RS12140 PF00696 Amino acid kinase family LK03_RS12145 PF02599 Global regulator protein family LK03_RS12170 PF01769 Divalent cation transporter LK03_RS12170 PF00571 CBS domain LK03_RS12170 PF03448 MgtE intracellular N domain LK03_RS12175 PF03869 Arc-like DNA binding domain LK03_RS12190 PF12849 PBP superfamily domain LK03_RS12195 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS12205 PF00005 ABC transporter LK03_RS12220 PF07690 Major Facilitator Superfamily LK03_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS12225 PF03466 LysR substrate binding domain LK03_RS12235 PF13593 SBF-like CPA transporter family (DUF4137) LK03_RS12255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS12255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK03_RS12260 PF02817 e3 binding domain LK03_RS12260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK03_RS12260 PF00364 Biotin-requiring enzyme LK03_RS12265 PF02780 Transketolase, C-terminal domain LK03_RS12265 PF02779 Transketolase, pyrimidine binding domain LK03_RS12270 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal LK03_RS12270 PF00676 Dehydrogenase E1 component LK03_RS12275 PF01037 Lrp/AsnC ligand binding domain LK03_RS12280 PF07690 Major Facilitator Superfamily LK03_RS12285 PF00593 TonB dependent receptor LK03_RS12285 PF07660 Secretin and TonB N terminus short domain LK03_RS12285 PF07715 TonB-dependent Receptor Plug Domain LK03_RS12290 PF07238 PilZ domain LK03_RS12290 PF07317 Flagellar regulator YcgR LK03_RS12310 PF01584 CheW-like domain LK03_RS12310 PF00072 Response regulator receiver domain LK03_RS12315 PF03705 CheR methyltransferase, all-alpha domain LK03_RS12315 PF01739 CheR methyltransferase, SAM binding domain LK03_RS12320 PF00460 Flagella basal body rod protein LK03_RS12325 PF00460 Flagella basal body rod protein LK03_RS12325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK03_RS12330 PF03963 Flagellar hook capping protein - N-terminal region LK03_RS12335 PF00460 Flagella basal body rod protein LK03_RS12335 PF07559 Flagellar basal body protein FlaE LK03_RS12335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK03_RS12345 PF00460 Flagella basal body rod protein LK03_RS12345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK03_RS12350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK03_RS12350 PF00460 Flagella basal body rod protein LK03_RS12355 PF02107 Flagellar L-ring protein LK03_RS12360 PF02119 Flagellar P-ring protein LK03_RS12365 PF10135 Rod binding protein LK03_RS12365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LK03_RS12370 PF00460 Flagella basal body rod protein LK03_RS12370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LK03_RS12375 PF00700 Bacterial flagellin C-terminal helical region LK03_RS12375 PF07196 Flagellin hook IN motif LK03_RS12375 PF00669 Bacterial flagellin N-terminal helical region LK03_RS12380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LK03_RS12380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LK03_RS12385 PF00700 Bacterial flagellin C-terminal helical region LK03_RS12385 PF07196 Flagellin hook IN motif LK03_RS12385 PF00669 Bacterial flagellin N-terminal helical region LK03_RS12395 PF07196 Flagellin hook IN motif LK03_RS12395 PF02465 Flagellar hook-associated protein 2 N-terminus LK03_RS12395 PF07195 Flagellar hook-associated protein 2 C-terminus LK03_RS12400 PF02561 Flagellar protein FliS LK03_RS12410 PF00158 Sigma-54 interaction domain LK03_RS12410 PF02954 Bacterial regulatory protein, Fis family LK03_RS12410 PF06490 Flagellar regulatory protein FleQ LK03_RS12415 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS12415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS12415 PF13188 PAS domain LK03_RS12420 PF02954 Bacterial regulatory protein, Fis family LK03_RS12420 PF00158 Sigma-54 interaction domain LK03_RS12420 PF00072 Response regulator receiver domain LK03_RS12425 PF02049 Flagellar hook-basal body complex protein FliE LK03_RS12430 PF01514 Secretory protein of YscJ/FliF family LK03_RS12430 PF08345 Flagellar M-ring protein C-terminal LK03_RS12435 PF01706 FliG C-terminal domain LK03_RS12435 PF14841 FliG middle domain LK03_RS12435 PF14842 FliG N-terminal domain LK03_RS12445 PF18269 T3SS EscN ATPase C-terminal domain LK03_RS12445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LK03_RS12470 PF02154 Flagellar motor switch protein FliM LK03_RS12470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK03_RS12475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LK03_RS12480 PF04347 Flagellar biosynthesis protein, FliO LK03_RS12485 PF00813 FliP family LK03_RS12490 PF01313 Bacterial export proteins, family 3 LK03_RS12495 PF01311 Bacterial export proteins, family 1 LK03_RS12500 PF01312 FlhB HrpN YscU SpaS Family LK03_RS12505 PF00771 FHIPEP family LK03_RS12510 PF00448 SRP54-type protein, GTPase domain LK03_RS12515 PF10609 NUBPL iron-transfer P-loop NTPase LK03_RS12520 PF04542 Sigma-70 region 2 LK03_RS12520 PF04539 Sigma-70 region 3 LK03_RS12520 PF04545 Sigma-70, region 4 LK03_RS12525 PF00072 Response regulator receiver domain LK03_RS12530 PF04344 Chemotaxis phosphatase, CheZ LK03_RS12535 PF02895 Signal transducing histidine kinase, homodimeric domain LK03_RS12535 PF01584 CheW-like domain LK03_RS12535 PF00072 Response regulator receiver domain LK03_RS12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS12535 PF01627 Hpt domain LK03_RS12540 PF01339 CheB methylesterase LK03_RS12540 PF00072 Response regulator receiver domain LK03_RS12545 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS12550 PF00691 OmpA family LK03_RS12550 PF13677 Membrane MotB of proton-channel complex MotA/MotB LK03_RS12555 PF13614 AAA domain LK03_RS12565 PF01584 CheW-like domain LK03_RS12580 PF11647 Membrane Localization Domain LK03_RS12585 PF01312 FlhB HrpN YscU SpaS Family LK03_RS12595 PF00005 ABC transporter LK03_RS12600 PF03379 CcmB protein LK03_RS12605 PF01578 Cytochrome C assembly protein LK03_RS12610 PF04995 Heme exporter protein D (CcmD) LK03_RS12615 PF03100 CcmE LK03_RS12620 PF01578 Cytochrome C assembly protein LK03_RS12620 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LK03_RS12625 PF08534 Redoxin LK03_RS12630 PF03918 Cytochrome C biogenesis protein LK03_RS12645 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LK03_RS12650 PF04320 Protein with unknown function (DUF469) LK03_RS12655 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS12655 PF00989 PAS fold LK03_RS12655 PF00072 Response regulator receiver domain LK03_RS12655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS12655 PF01627 Hpt domain LK03_RS12655 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS12660 PF00072 Response regulator receiver domain LK03_RS12660 PF00196 Bacterial regulatory proteins, luxR family LK03_RS12665 PF01966 HD domain LK03_RS12695 PF01479 S4 domain LK03_RS12695 PF00849 RNA pseudouridylate synthase LK03_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS12700 PF17200 Single Cache domain 2 LK03_RS12700 PF00672 HAMP domain LK03_RS12705 PF03618 Kinase/pyrophosphorylase LK03_RS12710 PF02896 PEP-utilising enzyme, TIM barrel domain LK03_RS12710 PF00391 PEP-utilising enzyme, mobile domain LK03_RS12710 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LK03_RS12720 PF03737 Aldolase/RraA LK03_RS12725 PF01544 CorA-like Mg2+ transporter protein LK03_RS12735 PF05552 Conserved TM helix LK03_RS12735 PF00924 Mechanosensitive ion channel LK03_RS12745 PF05736 OprF membrane domain LK03_RS12745 PF00691 OmpA family LK03_RS12750 PF01180 Dihydroorotate dehydrogenase LK03_RS12755 PF04957 Ribosome modulation factor LK03_RS12760 PF02926 THUMP domain LK03_RS12760 PF10672 S-adenosylmethionine-dependent methyltransferase LK03_RS12760 PF01170 Putative RNA methylase family UPF0020 LK03_RS12765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS12775 PF01177 Asp/Glu/Hydantoin racemase LK03_RS12780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LK03_RS12785 PF10672 S-adenosylmethionine-dependent methyltransferase LK03_RS12785 PF01170 Putative RNA methylase family UPF0020 LK03_RS12785 PF02926 THUMP domain LK03_RS12790 PF00924 Mechanosensitive ion channel LK03_RS12805 PF00520 Ion transport protein LK03_RS12805 PF00027 Cyclic nucleotide-binding domain LK03_RS12815 PF01609 Transposase DDE domain LK03_RS12815 PF05598 Transposase domain (DUF772) LK03_RS12825 PF00224 Pyruvate kinase, barrel domain LK03_RS12825 PF02887 Pyruvate kinase, alpha/beta domain LK03_RS12830 PF05161 MOFRL family LK03_RS12830 PF13660 Domain of unknown function (DUF4147) LK03_RS12835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK03_RS12835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LK03_RS12840 PF01261 Xylose isomerase-like TIM barrel LK03_RS12845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS12845 PF00205 Thiamine pyrophosphate enzyme, central domain LK03_RS12845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS12855 PF00440 Bacterial regulatory proteins, tetR family LK03_RS12855 PF08362 YcdC-like protein, C-terminal region LK03_RS12860 PF05661 Protein of unknown function (DUF808) LK03_RS12875 PF04115 Ureidoglycolate lyase LK03_RS12880 PF01014 Uricase LK03_RS12880 PF09349 OHCU decarboxylase LK03_RS12890 PF00576 HIUase/Transthyretin family LK03_RS12895 PF00072 Response regulator receiver domain LK03_RS12895 PF00486 Transcriptional regulatory protein, C terminal LK03_RS12900 PF08521 Two-component sensor kinase N-terminal LK03_RS12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS12900 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS12905 PF00202 Aminotransferase class-III LK03_RS12915 PF07859 alpha/beta hydrolase fold LK03_RS12925 PF01244 Membrane dipeptidase (Peptidase family M19) LK03_RS12935 PF02321 Outer membrane efflux protein LK03_RS12940 PF02687 FtsX-like permease family LK03_RS12940 PF00005 ABC transporter LK03_RS12940 PF12704 MacB-like periplasmic core domain LK03_RS12945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS12950 PF00083 Sugar (and other) transporter LK03_RS12950 PF08946 Osmosensory transporter coiled coil LK03_RS12960 PF01012 Electron transfer flavoprotein domain LK03_RS12965 PF01012 Electron transfer flavoprotein domain LK03_RS12965 PF00766 Electron transfer flavoprotein FAD-binding domain LK03_RS12980 PF00691 OmpA family LK03_RS12980 PF05736 OprF membrane domain LK03_RS12990 PF00392 Bacterial regulatory proteins, gntR family LK03_RS12990 PF07729 FCD domain LK03_RS12995 PF00375 Sodium:dicarboxylate symporter family LK03_RS13000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LK03_RS13000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LK03_RS13020 PF00589 Phage integrase family LK03_RS13060 PF00145 C-5 cytosine-specific DNA methylase LK03_RS13090 PF00196 Bacterial regulatory proteins, luxR family LK03_RS13110 PF02599 Global regulator protein family LK03_RS13140 PF01695 IstB-like ATP binding protein LK03_RS13145 PF07102 Protein of unknown function (DUF1364) LK03_RS13195 PF03354 Phage Terminase LK03_RS13325 PF07715 TonB-dependent Receptor Plug Domain LK03_RS13325 PF07660 Secretin and TonB N terminus short domain LK03_RS13325 PF00593 TonB dependent receptor LK03_RS13350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LK03_RS13350 PF05698 Bacterial trigger factor protein (TF) C-terminus LK03_RS13350 PF05697 Bacterial trigger factor protein (TF) LK03_RS13355 PF00574 Clp protease LK03_RS13360 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS13360 PF06689 ClpX C4-type zinc finger LK03_RS13360 PF07724 AAA domain (Cdc48 subfamily) LK03_RS13365 PF02190 ATP-dependent protease La (LON) substrate-binding domain LK03_RS13365 PF05362 Lon protease (S16) C-terminal proteolytic domain LK03_RS13365 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS13370 PF00216 Bacterial DNA-binding protein LK03_RS13375 PF00639 PPIC-type PPIASE domain LK03_RS13375 PF09312 SurA N-terminal domain LK03_RS13380 PF01734 Patatin-like phospholipase LK03_RS13400 PF12729 Four helix bundle sensory module for signal transduction LK03_RS13400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS13400 PF00672 HAMP domain LK03_RS13405 PF01026 TatD related DNase LK03_RS13410 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS13410 PF01464 Transglycosylase SLT domain LK03_RS13420 PF03449 Transcription elongation factor, N-terminal LK03_RS13420 PF01272 Transcription elongation factor, GreA/GreB, C-term LK03_RS13430 PF00005 ABC transporter LK03_RS13435 PF13472 GDSL-like Lipase/Acylhydrolase family LK03_RS13445 PF03734 L,D-transpeptidase catalytic domain LK03_RS13445 PF17969 L,D-transpeptidase C-terminal domain LK03_RS13450 PF11839 Alanine-zipper, major outer membrane lipoprotein LK03_RS13460 PF00793 DAHP synthetase I family LK03_RS13465 PF08546 Ketopantoate reductase PanE/ApbA C terminal LK03_RS13465 PF02558 Ketopantoate reductase PanE/ApbA LK03_RS13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS13475 PF03466 LysR substrate binding domain LK03_RS13480 PF01507 Phosphoadenosine phosphosulfate reductase family LK03_RS13485 PF04715 Anthranilate synthase component I, N terminal region LK03_RS13485 PF00425 chorismate binding enzyme LK03_RS13500 PF18030 RimK PreATP-grasp domain LK03_RS13500 PF08443 RimK-like ATP-grasp domain LK03_RS13505 PF00392 Bacterial regulatory proteins, gntR family LK03_RS13505 PF07729 FCD domain LK03_RS13515 PF00285 Citrate synthase, C-terminal domain LK03_RS13520 PF00694 Aconitase C-terminal domain LK03_RS13520 PF00330 Aconitase family (aconitate hydratase) LK03_RS13525 PF04303 PrpF protein LK03_RS13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS13530 PF00672 HAMP domain LK03_RS13530 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS13535 PF00072 Response regulator receiver domain LK03_RS13535 PF00486 Transcriptional regulatory protein, C terminal LK03_RS13545 PF14489 QueF-like protein LK03_RS13545 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LK03_RS13570 PF00072 Response regulator receiver domain LK03_RS13570 PF02954 Bacterial regulatory protein, Fis family LK03_RS13570 PF00158 Sigma-54 interaction domain LK03_RS13595 PF01425 Amidase LK03_RS13600 PF02979 Nitrile hydratase, alpha chain LK03_RS13605 PF02211 Nitrile hydratase beta subunit LK03_RS13610 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS13610 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS13615 PF08447 PAS fold LK03_RS13620 PF13193 AMP-binding enzyme C-terminal domain LK03_RS13620 PF00501 AMP-binding enzyme LK03_RS13625 PF00440 Bacterial regulatory proteins, tetR family LK03_RS13630 PF00923 Transaldolase/Fructose-6-phosphate aldolase LK03_RS13635 PF01207 Dihydrouridine synthase (Dus) LK03_RS13640 PF00589 Phage integrase family LK03_RS13670 PF00145 C-5 cytosine-specific DNA methylase LK03_RS13695 PF00561 alpha/beta hydrolase fold LK03_RS13710 PF00155 Aminotransferase class I and II LK03_RS13710 PF00392 Bacterial regulatory proteins, gntR family LK03_RS13715 PF00892 EamA-like transporter family LK03_RS13730 PF00672 HAMP domain LK03_RS13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS13730 PF02743 Cache domain LK03_RS13755 PF00106 short chain dehydrogenase LK03_RS13775 PF02586 SOS response associated peptidase (SRAP) LK03_RS13780 PF00717 Peptidase S24-like LK03_RS13785 PF00817 impB/mucB/samB family LK03_RS13785 PF13438 Domain of unknown function (DUF4113) LK03_RS13785 PF11799 impB/mucB/samB family C-terminal domain LK03_RS13805 PF10531 SLBB domain LK03_RS13805 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LK03_RS13805 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LK03_RS13810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK03_RS13810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LK03_RS13810 PF01568 Molydopterin dinucleotide binding domain LK03_RS13810 PF00384 Molybdopterin oxidoreductase LK03_RS13810 PF12838 4Fe-4S dicluster domain LK03_RS13820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS13820 PF00672 HAMP domain LK03_RS13820 PF02743 Cache domain LK03_RS13825 PF01925 Sulfite exporter TauE/SafE LK03_RS13830 PF02743 Cache domain LK03_RS13830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS13830 PF00672 HAMP domain LK03_RS13835 PF00392 Bacterial regulatory proteins, gntR family LK03_RS13835 PF00155 Aminotransferase class I and II LK03_RS13845 PF03692 Putative zinc- or iron-chelating domain LK03_RS13850 PF01852 START domain LK03_RS13855 PF00285 Citrate synthase, C-terminal domain LK03_RS13860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LK03_RS13865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LK03_RS13870 PF02910 Fumarate reductase flavoprotein C-term LK03_RS13870 PF00890 FAD binding domain LK03_RS13875 PF13085 2Fe-2S iron-sulfur cluster binding domain LK03_RS13880 PF16078 2-oxoglutarate dehydrogenase N-terminus LK03_RS13880 PF00676 Dehydrogenase E1 component LK03_RS13880 PF16870 2-oxoglutarate dehydrogenase C-terminal LK03_RS13880 PF02779 Transketolase, pyrimidine binding domain LK03_RS13885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LK03_RS13885 PF00364 Biotin-requiring enzyme LK03_RS13885 PF02817 e3 binding domain LK03_RS13890 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS13890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK03_RS13895 PF00549 CoA-ligase LK03_RS13895 PF08442 ATP-grasp domain LK03_RS13900 PF00549 CoA-ligase LK03_RS13900 PF02629 CoA binding domain LK03_RS13905 PF05525 Branched-chain amino acid transport protein LK03_RS13920 PF00183 Hsp90 protein LK03_RS13920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS13935 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS13935 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS13940 PF07977 FabA-like domain LK03_RS13945 PF00672 HAMP domain LK03_RS13945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS13945 PF01627 Hpt domain LK03_RS13945 PF00072 Response regulator receiver domain LK03_RS13945 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS13955 PF07715 TonB-dependent Receptor Plug Domain LK03_RS13955 PF00593 TonB dependent receptor LK03_RS13960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LK03_RS13960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LK03_RS13985 PF12697 Alpha/beta hydrolase family LK03_RS13995 PF01594 AI-2E family transporter LK03_RS14000 PF01425 Amidase LK03_RS14005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK03_RS14005 PF00364 Biotin-requiring enzyme LK03_RS14005 PF02785 Biotin carboxylase C-terminal domain LK03_RS14005 PF00289 Biotin carboxylase, N-terminal domain LK03_RS14010 PF00392 Bacterial regulatory proteins, gntR family LK03_RS14010 PF07729 FCD domain LK03_RS14015 PF13458 Periplasmic binding protein LK03_RS14020 PF02653 Branched-chain amino acid transport system / permease component LK03_RS14030 PF00005 ABC transporter LK03_RS14030 PF12399 Branched-chain amino acid ATP-binding cassette transporter LK03_RS14035 PF00005 ABC transporter LK03_RS14045 PF03814 Potassium-transporting ATPase A subunit LK03_RS14055 PF02669 K+-transporting ATPase, c chain LK03_RS14060 PF13493 Domain of unknown function (DUF4118) LK03_RS14060 PF13492 GAF domain LK03_RS14060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS14060 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS14060 PF02702 Osmosensitive K+ channel His kinase sensor domain LK03_RS14065 PF00072 Response regulator receiver domain LK03_RS14065 PF00486 Transcriptional regulatory protein, C terminal LK03_RS14070 PF00005 ABC transporter LK03_RS14070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK03_RS14075 PF12911 N-terminal TM domain of oligopeptide transport permease C LK03_RS14075 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS14080 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS14085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS14090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS14095 PF01464 Transglycosylase SLT domain LK03_RS14095 PF01476 LysM domain LK03_RS14100 PF00753 Metallo-beta-lactamase superfamily LK03_RS14100 PF16123 Hydroxyacylglutathione hydrolase C-terminus LK03_RS14110 PF00075 RNase H LK03_RS14115 PF00929 Exonuclease LK03_RS14125 PF03358 NADPH-dependent FMN reductase LK03_RS14130 PF12833 Helix-turn-helix domain LK03_RS14140 PF00106 short chain dehydrogenase LK03_RS14145 PF00108 Thiolase, N-terminal domain LK03_RS14145 PF02803 Thiolase, C-terminal domain LK03_RS14150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS14150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS14150 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS14155 PF00378 Enoyl-CoA hydratase/isomerase LK03_RS14160 PF00465 Iron-containing alcohol dehydrogenase LK03_RS14165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS14165 PF00072 Response regulator receiver domain LK03_RS14165 PF01627 Hpt domain LK03_RS14165 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS14165 PF00672 HAMP domain LK03_RS14170 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK03_RS14185 PF03334 Na+/H+ antiporter subunit LK03_RS14190 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LK03_RS14200 PF00361 Proton-conducting membrane transporter LK03_RS14205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LK03_RS14210 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LK03_RS14210 PF00361 Proton-conducting membrane transporter LK03_RS14210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK03_RS14210 PF13244 Domain of unknown function (DUF4040) LK03_RS14235 PF00892 EamA-like transporter family LK03_RS14265 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LK03_RS14285 PF13409 Glutathione S-transferase, N-terminal domain LK03_RS14290 PF00591 Glycosyl transferase family, a/b domain LK03_RS14290 PF02885 Glycosyl transferase family, helical bundle domain LK03_RS14295 PF04358 DsrC like protein LK03_RS14305 PF02635 DsrE/DsrF-like family LK03_RS14310 PF02635 DsrE/DsrF-like family LK03_RS14315 PF00860 Permease family LK03_RS14320 PF01027 Inhibitor of apoptosis-promoting Bax1 LK03_RS14330 PF00593 TonB dependent receptor LK03_RS14330 PF07715 TonB-dependent Receptor Plug Domain LK03_RS14335 PF07715 TonB-dependent Receptor Plug Domain LK03_RS14335 PF00593 TonB dependent receptor LK03_RS14345 PF00296 Luciferase-like monooxygenase LK03_RS14350 PF00248 Aldo/keto reductase family LK03_RS14355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS14360 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS14365 PF12911 N-terminal TM domain of oligopeptide transport permease C LK03_RS14365 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS14370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK03_RS14370 PF00005 ABC transporter LK03_RS14380 PF00158 Sigma-54 interaction domain LK03_RS14385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS14385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS14395 PF07690 Major Facilitator Superfamily LK03_RS14400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK03_RS14400 PF02272 DHHA1 domain LK03_RS14400 PF01411 tRNA synthetases class II (A) LK03_RS14405 PF12804 MobA-like NTP transferase domain LK03_RS14405 PF00132 Bacterial transferase hexapeptide (six repeats) LK03_RS14410 PF00155 Aminotransferase class I and II LK03_RS14410 PF00392 Bacterial regulatory proteins, gntR family LK03_RS14415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LK03_RS14415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LK03_RS14420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LK03_RS14420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LK03_RS14425 PF00723 Glycosyl hydrolases family 15 LK03_RS14430 PF04337 Protein of unknown function, DUF480 LK03_RS14435 PF00375 Sodium:dicarboxylate symporter family LK03_RS14440 PF03466 LysR substrate binding domain LK03_RS14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS14445 PF03741 Integral membrane protein TerC family LK03_RS14445 PF03471 Transporter associated domain LK03_RS14455 PF01266 FAD dependent oxidoreductase LK03_RS14485 PF00293 NUDIX domain LK03_RS14490 PF00392 Bacterial regulatory proteins, gntR family LK03_RS14490 PF07729 FCD domain LK03_RS14495 PF02627 Carboxymuconolactone decarboxylase family LK03_RS14500 PF01613 Flavin reductase like domain LK03_RS14505 PF00171 Aldehyde dehydrogenase family LK03_RS14510 PF12697 Alpha/beta hydrolase family LK03_RS14520 PF00296 Luciferase-like monooxygenase LK03_RS14525 PF01613 Flavin reductase like domain LK03_RS14530 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LK03_RS14535 PF00672 HAMP domain LK03_RS14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS14535 PF12729 Four helix bundle sensory module for signal transduction LK03_RS14540 PF01343 Peptidase family S49 LK03_RS14540 PF08496 Peptidase family S49 N-terminal LK03_RS14550 PF00589 Phage integrase family LK03_RS14610 PF00436 Single-strand binding protein family LK03_RS14675 PF00717 Peptidase S24-like LK03_RS14675 PF01381 Helix-turn-helix LK03_RS14915 PF02899 Phage integrase, N-terminal SAM-like domain LK03_RS14915 PF00589 Phage integrase family LK03_RS14965 PF00145 C-5 cytosine-specific DNA methylase LK03_RS15010 PF00196 Bacterial regulatory proteins, luxR family LK03_RS15025 PF02599 Global regulator protein family LK03_RS15035 PF00717 Peptidase S24-like LK03_RS15035 PF01381 Helix-turn-helix LK03_RS15060 PF07102 Protein of unknown function (DUF1364) LK03_RS15095 PF07927 HicA toxin of bacterial toxin-antitoxin, LK03_RS15120 PF03354 Phage Terminase LK03_RS15125 PF04860 Phage portal protein LK03_RS15130 PF00574 Clp protease LK03_RS15170 PF17482 Phage tail sheath C-terminal domain LK03_RS15170 PF04984 Phage tail sheath protein subtilisin-like domain LK03_RS15210 PF04865 Baseplate J-like protein LK03_RS15270 PF08281 Sigma-70, region 4 LK03_RS15270 PF04542 Sigma-70 region 2 LK03_RS15280 PF00593 TonB dependent receptor LK03_RS15280 PF07660 Secretin and TonB N terminus short domain LK03_RS15280 PF07715 TonB-dependent Receptor Plug Domain LK03_RS15295 PF00593 TonB dependent receptor LK03_RS15295 PF07715 TonB-dependent Receptor Plug Domain LK03_RS15310 PF00376 MerR family regulatory protein LK03_RS15310 PF09278 MerR, DNA binding LK03_RS15325 PF02599 Global regulator protein family LK03_RS15335 PF00005 ABC transporter LK03_RS15335 PF03459 TOBE domain LK03_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS15350 PF03060 Nitronate monooxygenase LK03_RS15365 PF00483 Nucleotidyl transferase LK03_RS15370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK03_RS15370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS15375 PF10417 C-terminal domain of 1-Cys peroxiredoxin LK03_RS15375 PF00578 AhpC/TSA family LK03_RS15380 PF13192 Thioredoxin domain LK03_RS15380 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS15385 PF00378 Enoyl-CoA hydratase/isomerase LK03_RS15390 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LK03_RS15390 PF00293 NUDIX domain LK03_RS15390 PF09297 NADH pyrophosphatase zinc ribbon domain LK03_RS15395 PF01925 Sulfite exporter TauE/SafE LK03_RS15410 PF00072 Response regulator receiver domain LK03_RS15410 PF00196 Bacterial regulatory proteins, luxR family LK03_RS15415 PF08459 UvrC Helix-hairpin-helix N-terminal LK03_RS15415 PF02151 UvrB/uvrC motif LK03_RS15415 PF01541 GIY-YIG catalytic domain LK03_RS15420 PF01066 CDP-alcohol phosphatidyltransferase LK03_RS15450 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LK03_RS15450 PF13296 Putative type VI secretion system Rhs element Vgr LK03_RS15450 PF04717 Type VI secretion system, phage-baseplate injector LK03_RS15480 PF05638 Type VI secretion system effector, Hcp LK03_RS15490 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LK03_RS15510 PF05947 Type VI secretion system, TssF LK03_RS15520 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LK03_RS15540 PF14331 ImcF-related N-terminal domain LK03_RS15540 PF06744 Type VI secretion protein IcmF C-terminal LK03_RS15540 PF06761 Intracellular multiplication and human macrophage-killing LK03_RS15550 PF00083 Sugar (and other) transporter LK03_RS15555 PF00701 Dihydrodipicolinate synthetase family LK03_RS15560 PF00171 Aldehyde dehydrogenase family LK03_RS15570 PF02913 FAD linked oxidases, C-terminal domain LK03_RS15570 PF01565 FAD binding domain LK03_RS15575 PF03328 HpcH/HpaI aldolase/citrate lyase family LK03_RS15585 PF12833 Helix-turn-helix domain LK03_RS15585 PF01965 DJ-1/PfpI family LK03_RS15590 PF00392 Bacterial regulatory proteins, gntR family LK03_RS15590 PF07729 FCD domain LK03_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS15610 PF00072 Response regulator receiver domain LK03_RS15610 PF00196 Bacterial regulatory proteins, luxR family LK03_RS15615 PF04346 Ethanolamine utilisation protein, EutH LK03_RS15620 PF04030 D-arabinono-1,4-lactone oxidase LK03_RS15620 PF01565 FAD binding domain LK03_RS15630 PF00593 TonB dependent receptor LK03_RS15630 PF07715 TonB-dependent Receptor Plug Domain LK03_RS15635 PF03466 LysR substrate binding domain LK03_RS15635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS15640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LK03_RS15640 PF13378 Enolase C-terminal domain-like LK03_RS15645 PF02426 Muconolactone delta-isomerase LK03_RS15650 PF00775 Dioxygenase LK03_RS15650 PF04444 Catechol dioxygenase N terminus LK03_RS15655 PF07690 Major Facilitator Superfamily LK03_RS15665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK03_RS15665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK03_RS15670 PF12728 Helix-turn-helix domain LK03_RS15685 PF00083 Sugar (and other) transporter LK03_RS15695 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS15705 PF00355 Rieske [2Fe-2S] domain LK03_RS15705 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK03_RS15710 PF07690 Major Facilitator Superfamily LK03_RS15715 PF03466 LysR substrate binding domain LK03_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS15720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS15720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS15730 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LK03_RS15730 PF00355 Rieske [2Fe-2S] domain LK03_RS15745 PF00175 Oxidoreductase NAD-binding domain LK03_RS15745 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS15750 PF01613 Flavin reductase like domain LK03_RS15755 PF01047 MarR family LK03_RS15760 PF01425 Amidase LK03_RS15780 PF00171 Aldehyde dehydrogenase family LK03_RS15785 PF12833 Helix-turn-helix domain LK03_RS15800 PF01266 FAD dependent oxidoreductase LK03_RS15805 PF08003 Protein of unknown function (DUF1698) LK03_RS15815 PF00205 Thiamine pyrophosphate enzyme, central domain LK03_RS15815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS15815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS15820 PF00561 alpha/beta hydrolase fold LK03_RS15835 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LK03_RS15835 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LK03_RS15840 PF13407 Periplasmic binding protein domain LK03_RS15850 PF07690 Major Facilitator Superfamily LK03_RS15860 PF00440 Bacterial regulatory proteins, tetR family LK03_RS15865 PF02965 Vitamin B12 dependent methionine synthase, activation domain LK03_RS15865 PF02310 B12 binding domain LK03_RS15865 PF02574 Homocysteine S-methyltransferase LK03_RS15865 PF02607 B12 binding domain LK03_RS15865 PF00809 Pterin binding enzyme LK03_RS15875 PF01757 Acyltransferase family LK03_RS15880 PF01106 NifU-like domain LK03_RS15880 PF01521 Iron-sulphur cluster biosynthesis LK03_RS15885 PF02630 SCO1/SenC LK03_RS15900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LK03_RS15900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LK03_RS15900 PF01276 Orn/Lys/Arg decarboxylase, major domain LK03_RS15905 PF12833 Helix-turn-helix domain LK03_RS15930 PF01810 LysE type translocator LK03_RS15935 PF08892 YqcI/YcgG family LK03_RS15940 PF03466 LysR substrate binding domain LK03_RS15940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS15950 PF00266 Aminotransferase class-V LK03_RS15955 PF08946 Osmosensory transporter coiled coil LK03_RS15955 PF00083 Sugar (and other) transporter LK03_RS15960 PF00072 Response regulator receiver domain LK03_RS15960 PF13426 PAS domain LK03_RS15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS15965 PF00710 Asparaginase, N-terminal LK03_RS15965 PF17763 Glutaminase/Asparaginase C-terminal domain LK03_RS15980 PF00313 'Cold-shock' DNA-binding domain LK03_RS15990 PF03129 Anticodon binding domain LK03_RS15990 PF02824 TGS domain LK03_RS15990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LK03_RS15990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK03_RS15995 PF00707 Translation initiation factor IF-3, C-terminal domain LK03_RS15995 PF05198 Translation initiation factor IF-3, N-terminal domain LK03_RS16000 PF01632 Ribosomal protein L35 LK03_RS16005 PF00453 Ribosomal protein L20 LK03_RS16010 PF01409 tRNA synthetases class II core domain (F) LK03_RS16010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LK03_RS16015 PF03483 B3/4 domain LK03_RS16015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LK03_RS16015 PF01588 Putative tRNA binding domain LK03_RS16015 PF03147 Ferredoxin-fold anticodon binding domain LK03_RS16015 PF03484 tRNA synthetase B5 domain LK03_RS16020 PF00216 Bacterial DNA-binding protein LK03_RS16035 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LK03_RS16035 PF12833 Helix-turn-helix domain LK03_RS16055 PF00975 Thioesterase domain LK03_RS16060 PF00501 AMP-binding enzyme LK03_RS16060 PF00668 Condensation domain LK03_RS16060 PF08242 Methyltransferase domain LK03_RS16060 PF00550 Phosphopantetheine attachment site LK03_RS16065 PF13193 AMP-binding enzyme C-terminal domain LK03_RS16065 PF00501 AMP-binding enzyme LK03_RS16075 PF07690 Major Facilitator Superfamily LK03_RS16080 PF00593 TonB dependent receptor LK03_RS16080 PF07715 TonB-dependent Receptor Plug Domain LK03_RS16200 PF00384 Molybdopterin oxidoreductase LK03_RS16200 PF01568 Molydopterin dinucleotide binding domain LK03_RS16200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK03_RS16205 PF12800 4Fe-4S binding domain LK03_RS16205 PF09163 Formate dehydrogenase N, transmembrane LK03_RS16205 PF13247 4Fe-4S dicluster domain LK03_RS16210 PF01292 Prokaryotic cytochrome b561 LK03_RS16215 PF04216 Protein involved in formate dehydrogenase formation LK03_RS16230 PF01810 LysE type translocator LK03_RS16255 PF00593 TonB dependent receptor LK03_RS16255 PF07715 TonB-dependent Receptor Plug Domain LK03_RS16260 PF08678 Rsbr N terminal LK03_RS16260 PF01740 STAS domain LK03_RS16265 PF01740 STAS domain LK03_RS16270 PF13581 Histidine kinase-like ATPase domain LK03_RS16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS16280 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS16285 PF13426 PAS domain LK03_RS16285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS16285 PF00072 Response regulator receiver domain LK03_RS16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS16290 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS16295 PF00486 Transcriptional regulatory protein, C terminal LK03_RS16295 PF00072 Response regulator receiver domain LK03_RS16300 PF01063 Amino-transferase class IV LK03_RS16305 PF12804 MobA-like NTP transferase domain LK03_RS16310 PF01799 [2Fe-2S] binding domain LK03_RS16310 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS16315 PF00941 FAD binding domain in molybdopterin dehydrogenase LK03_RS16315 PF03450 CO dehydrogenase flavoprotein C-terminal domain LK03_RS16320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK03_RS16320 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LK03_RS16330 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LK03_RS16330 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LK03_RS16345 PF01810 LysE type translocator LK03_RS16355 PF13193 AMP-binding enzyme C-terminal domain LK03_RS16355 PF00501 AMP-binding enzyme LK03_RS16360 PF00106 short chain dehydrogenase LK03_RS16370 PF12833 Helix-turn-helix domain LK03_RS16370 PF06719 AraC-type transcriptional regulator N-terminus LK03_RS16375 PF00107 Zinc-binding dehydrogenase LK03_RS16375 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS16385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS16385 PF03466 LysR substrate binding domain LK03_RS16390 PF00005 ABC transporter LK03_RS16395 PF12704 MacB-like periplasmic core domain LK03_RS16395 PF02687 FtsX-like permease family LK03_RS16420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS16420 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS16420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS16460 PF02709 N-terminal domain of galactosyltransferase LK03_RS16460 PF00535 Glycosyl transferase family 2 LK03_RS16470 PF13579 Glycosyl transferase 4-like domain LK03_RS16470 PF00534 Glycosyl transferases group 1 LK03_RS16490 PF02397 Bacterial sugar transferase LK03_RS16495 PF01370 NAD dependent epimerase/dehydratase family LK03_RS16500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LK03_RS16500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LK03_RS16500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LK03_RS16510 PF02585 GlcNAc-PI de-N-acetylase LK03_RS16520 PF04231 Endonuclease I LK03_RS16525 PF13533 Biotin-lipoyl like LK03_RS16540 PF02954 Bacterial regulatory protein, Fis family LK03_RS16540 PF00158 Sigma-54 interaction domain LK03_RS16540 PF00072 Response regulator receiver domain LK03_RS16545 PF00459 Inositol monophosphatase family LK03_RS16555 PF00136 DNA polymerase family B LK03_RS16555 PF03104 DNA polymerase family B, exonuclease domain LK03_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS16570 PF12911 N-terminal TM domain of oligopeptide transport permease C LK03_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS16580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS16585 PF05698 Bacterial trigger factor protein (TF) C-terminus LK03_RS16590 PF00793 DAHP synthetase I family LK03_RS16595 PF00196 Bacterial regulatory proteins, luxR family LK03_RS16595 PF00072 Response regulator receiver domain LK03_RS16600 PF00072 Response regulator receiver domain LK03_RS16600 PF00196 Bacterial regulatory proteins, luxR family LK03_RS16610 PF13360 PQQ-like domain LK03_RS16610 PF01011 PQQ enzyme repeat LK03_RS16615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK03_RS16635 PF03972 MmgE/PrpD family LK03_RS16640 PF00296 Luciferase-like monooxygenase LK03_RS16645 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS16650 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS16655 PF00005 ABC transporter LK03_RS16660 PF00672 HAMP domain LK03_RS16660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS16660 PF12729 Four helix bundle sensory module for signal transduction LK03_RS16685 PF00701 Dihydrodipicolinate synthetase family LK03_RS16690 PF00596 Class II Aldolase and Adducin N-terminal domain LK03_RS16695 PF01381 Helix-turn-helix LK03_RS16695 PF08671 Anti-repressor SinI LK03_RS16710 PF13411 MerR HTH family regulatory protein LK03_RS16730 PF00248 Aldo/keto reductase family LK03_RS16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS16735 PF03466 LysR substrate binding domain LK03_RS16745 PF00593 TonB dependent receptor LK03_RS16745 PF07715 TonB-dependent Receptor Plug Domain LK03_RS16750 PF01497 Periplasmic binding protein LK03_RS16755 PF00005 ABC transporter LK03_RS16760 PF01032 FecCD transport family LK03_RS16765 PF01032 FecCD transport family LK03_RS16770 PF00005 ABC transporter LK03_RS16775 PF04954 Siderophore-interacting protein LK03_RS16775 PF00005 ABC transporter LK03_RS16775 PF08021 Siderophore-interacting FAD-binding domain LK03_RS16775 PF00664 ABC transporter transmembrane region LK03_RS16785 PF02028 BCCT, betaine/carnitine/choline family transporter LK03_RS16790 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LK03_RS16790 PF18381 YcaO cyclodehydratase C-terminal domain LK03_RS16800 PF00563 EAL domain LK03_RS16800 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS16800 PF03707 Bacterial signalling protein N terminal repeat LK03_RS16800 PF13188 PAS domain LK03_RS16810 PF03435 Saccharopine dehydrogenase NADP binding domain LK03_RS16810 PF16653 Saccharopine dehydrogenase C-terminal domain LK03_RS16815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LK03_RS16820 PF03573 outer membrane porin, OprD family LK03_RS16825 PF00127 Copper binding proteins, plastocyanin/azurin family LK03_RS16830 PF00005 ABC transporter LK03_RS16835 PF01032 FecCD transport family LK03_RS16860 PF01593 Flavin containing amine oxidoreductase LK03_RS16870 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase LK03_RS16875 PF01070 FMN-dependent dehydrogenase LK03_RS16880 PF00348 Polyprenyl synthetase LK03_RS16895 PF06039 Malate:quinone oxidoreductase (Mqo) LK03_RS16905 PF00083 Sugar (and other) transporter LK03_RS16905 PF08946 Osmosensory transporter coiled coil LK03_RS16915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LK03_RS16915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LK03_RS16940 PF13823 Alcohol dehydrogenase GroES-associated LK03_RS16940 PF00107 Zinc-binding dehydrogenase LK03_RS16940 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS16950 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS16950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS16955 PF12697 Alpha/beta hydrolase family LK03_RS16960 PF00072 Response regulator receiver domain LK03_RS16960 PF02954 Bacterial regulatory protein, Fis family LK03_RS16960 PF00158 Sigma-54 interaction domain LK03_RS16965 PF01965 DJ-1/PfpI family LK03_RS16975 PF00384 Molybdopterin oxidoreductase LK03_RS16980 PF07690 Major Facilitator Superfamily LK03_RS16985 PF07690 Major Facilitator Superfamily LK03_RS16995 PF05995 Cysteine dioxygenase type I LK03_RS17005 PF00296 Luciferase-like monooxygenase LK03_RS17025 PF00293 NUDIX domain LK03_RS17040 PF00291 Pyridoxal-phosphate dependent enzyme LK03_RS17045 PF01425 Amidase LK03_RS17060 PF07883 Cupin domain LK03_RS17060 PF01381 Helix-turn-helix LK03_RS17065 PF07690 Major Facilitator Superfamily LK03_RS17080 PF08281 Sigma-70, region 4 LK03_RS17080 PF04542 Sigma-70 region 2 LK03_RS17095 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS17095 PF03707 Bacterial signalling protein N terminal repeat LK03_RS17095 PF00563 EAL domain LK03_RS17095 PF13188 PAS domain LK03_RS17105 PF00324 Amino acid permease LK03_RS17115 PF00083 Sugar (and other) transporter LK03_RS17115 PF07690 Major Facilitator Superfamily LK03_RS17120 PF01261 Xylose isomerase-like TIM barrel LK03_RS17120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK03_RS17125 PF00005 ABC transporter LK03_RS17125 PF12848 ABC transporter LK03_RS17135 PF04542 Sigma-70 region 2 LK03_RS17135 PF08281 Sigma-70, region 4 LK03_RS17140 PF16220 Domain of unknown function (DUF4880) LK03_RS17140 PF04773 FecR protein LK03_RS17145 PF00080 Copper/zinc superoxide dismutase (SODC) LK03_RS17150 PF03372 Endonuclease/Exonuclease/phosphatase family LK03_RS17160 PF01103 Surface antigen LK03_RS17160 PF07244 Surface antigen variable number repeat LK03_RS17160 PF17243 POTRA domain TamA domain 1 LK03_RS17165 PF04357 TamB, inner membrane protein subunit of TAM complex LK03_RS17185 PF01804 Penicillin amidase LK03_RS17190 PF00149 Calcineurin-like phosphoesterase LK03_RS17195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LK03_RS17200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LK03_RS17200 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK03_RS17205 PF01406 tRNA synthetases class I (C) catalytic domain LK03_RS17205 PF09190 DALR domain LK03_RS17210 PF09339 IclR helix-turn-helix domain LK03_RS17210 PF01614 Bacterial transcriptional regulator LK03_RS17215 PF04909 Amidohydrolase LK03_RS17220 PF07690 Major Facilitator Superfamily LK03_RS17225 PF01842 ACT domain LK03_RS17225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS17225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS17230 PF03737 Aldolase/RraA LK03_RS17235 PF07690 Major Facilitator Superfamily LK03_RS17240 PF00672 HAMP domain LK03_RS17240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS17245 PF13726 Na+-H+ antiporter family LK03_RS17245 PF03553 Na+/H+ antiporter family LK03_RS17260 PF02321 Outer membrane efflux protein LK03_RS17265 PF00873 AcrB/AcrD/AcrF family LK03_RS17270 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS17270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS17275 PF02678 Pirin LK03_RS17275 PF17954 Quercetinase C-terminal cupin domain LK03_RS17280 PF13361 UvrD-like helicase C-terminal domain LK03_RS17280 PF12462 DNA helicase IV / RNA helicase N terminal LK03_RS17280 PF00580 UvrD/REP helicase N-terminal domain LK03_RS17285 PF05970 PIF1-like helicase LK03_RS17290 PF00171 Aldehyde dehydrogenase family LK03_RS17295 PF03466 LysR substrate binding domain LK03_RS17295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS17300 PF10685 Stress-induced bacterial acidophilic repeat motif LK03_RS17305 PF02735 Ku70/Ku80 beta-barrel domain LK03_RS17310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK03_RS17325 PF05899 Protein of unknown function (DUF861) LK03_RS17325 PF07883 Cupin domain LK03_RS17335 PF07722 Peptidase C26 LK03_RS17340 PF02615 Malate/L-lactate dehydrogenase LK03_RS17345 PF00155 Aminotransferase class I and II LK03_RS17350 PF12804 MobA-like NTP transferase domain LK03_RS17355 PF00873 AcrB/AcrD/AcrF family LK03_RS17360 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS17360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS17365 PF00486 Transcriptional regulatory protein, C terminal LK03_RS17365 PF00072 Response regulator receiver domain LK03_RS17370 PF00672 HAMP domain LK03_RS17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS17370 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS17420 PF02673 Bacitracin resistance protein BacA LK03_RS17430 PF03466 LysR substrate binding domain LK03_RS17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS17435 PF02525 Flavodoxin-like fold LK03_RS17455 PF03707 Bacterial signalling protein N terminal repeat LK03_RS17455 PF00563 EAL domain LK03_RS17455 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS17470 PF01590 GAF domain LK03_RS17470 PF00563 EAL domain LK03_RS17470 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS17470 PF00360 Phytochrome region LK03_RS17475 PF02308 MgtC family LK03_RS17480 PF04116 Fatty acid hydroxylase superfamily LK03_RS17495 PF12392 Collagenase LK03_RS17495 PF01136 Peptidase family U32 LK03_RS17500 PF00593 TonB dependent receptor LK03_RS17500 PF07715 TonB-dependent Receptor Plug Domain LK03_RS17505 PF01042 Endoribonuclease L-PSP LK03_RS17510 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LK03_RS17515 PF03706 Lysylphosphatidylglycerol synthase TM region LK03_RS17520 PF13091 PLD-like domain LK03_RS17525 PF03372 Endonuclease/Exonuclease/phosphatase family LK03_RS17535 PF01339 CheB methylesterase LK03_RS17535 PF01739 CheR methyltransferase, SAM binding domain LK03_RS17535 PF03705 CheR methyltransferase, all-alpha domain LK03_RS17535 PF08448 PAS fold LK03_RS17540 PF00107 Zinc-binding dehydrogenase LK03_RS17540 PF13823 Alcohol dehydrogenase GroES-associated LK03_RS17540 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS17550 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) LK03_RS17580 PF12951 Passenger-associated-transport-repeat LK03_RS17585 PF05598 Transposase domain (DUF772) LK03_RS17585 PF01609 Transposase DDE domain LK03_RS17595 PF07690 Major Facilitator Superfamily LK03_RS17600 PF07690 Major Facilitator Superfamily LK03_RS17605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS17605 PF03466 LysR substrate binding domain LK03_RS17610 PF00701 Dihydrodipicolinate synthetase family LK03_RS17615 PF07690 Major Facilitator Superfamily LK03_RS17625 PF00795 Carbon-nitrogen hydrolase LK03_RS17630 PF00324 Amino acid permease LK03_RS17635 PF02627 Carboxymuconolactone decarboxylase family LK03_RS17640 PF10397 Adenylosuccinate lyase C-terminus LK03_RS17640 PF00206 Lyase LK03_RS17645 PF00775 Dioxygenase LK03_RS17650 PF00775 Dioxygenase LK03_RS17650 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LK03_RS17655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS17655 PF03466 LysR substrate binding domain LK03_RS17660 PF10011 Predicted membrane protein (DUF2254) LK03_RS17665 PF07690 Major Facilitator Superfamily LK03_RS17670 PF12833 Helix-turn-helix domain LK03_RS17670 PF02311 AraC-like ligand binding domain LK03_RS17675 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK03_RS17680 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK03_RS17685 PF00171 Aldehyde dehydrogenase family LK03_RS17690 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LK03_RS17700 PF07690 Major Facilitator Superfamily LK03_RS17705 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK03_RS17710 PF03328 HpcH/HpaI aldolase/citrate lyase family LK03_RS17715 PF01613 Flavin reductase like domain LK03_RS17720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS17725 PF00440 Bacterial regulatory proteins, tetR family LK03_RS17725 PF08361 MAATS-type transcriptional repressor, C-terminal region LK03_RS17730 PF01047 MarR family LK03_RS17735 PF00579 tRNA synthetases class I (W and Y) LK03_RS17740 PF01266 FAD dependent oxidoreductase LK03_RS17760 PF13520 Amino acid permease LK03_RS17765 PF00171 Aldehyde dehydrogenase family LK03_RS17780 PF07690 Major Facilitator Superfamily LK03_RS17790 PF01042 Endoribonuclease L-PSP LK03_RS17795 PF01266 FAD dependent oxidoreductase LK03_RS17800 PF02223 Thymidylate kinase LK03_RS17805 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS17805 PF00107 Zinc-binding dehydrogenase LK03_RS17810 PF03466 LysR substrate binding domain LK03_RS17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS17815 PF09084 NMT1/THI5 like LK03_RS17820 PF09084 NMT1/THI5 like LK03_RS17825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS17825 PF08447 PAS fold LK03_RS17825 PF13426 PAS domain LK03_RS17830 PF09084 NMT1/THI5 like LK03_RS17835 PF00296 Luciferase-like monooxygenase LK03_RS17845 PF01258 Prokaryotic dksA/traR C4-type zinc finger LK03_RS17850 PF00107 Zinc-binding dehydrogenase LK03_RS17850 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS17860 PF01979 Amidohydrolase family LK03_RS17865 PF01502 Phosphoribosyl-AMP cyclohydrolase LK03_RS17880 PF07690 Major Facilitator Superfamily LK03_RS17885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS17885 PF00672 HAMP domain LK03_RS17890 PF12833 Helix-turn-helix domain LK03_RS17905 PF00171 Aldehyde dehydrogenase family LK03_RS17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS17920 PF13426 PAS domain LK03_RS17920 PF00072 Response regulator receiver domain LK03_RS17925 PF00293 NUDIX domain LK03_RS17925 PF03099 Biotin/lipoate A/B protein ligase family LK03_RS17940 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS17960 PF01068 ATP dependent DNA ligase domain LK03_RS17960 PF13298 DNA polymerase Ligase (LigD) LK03_RS17960 PF04679 ATP dependent DNA ligase C terminal region LK03_RS17990 PF12833 Helix-turn-helix domain LK03_RS17990 PF01965 DJ-1/PfpI family LK03_RS17995 PF07715 TonB-dependent Receptor Plug Domain LK03_RS17995 PF00593 TonB dependent receptor LK03_RS18000 PF00563 EAL domain LK03_RS18000 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS18000 PF03707 Bacterial signalling protein N terminal repeat LK03_RS18005 PF00171 Aldehyde dehydrogenase family LK03_RS18015 PF00465 Iron-containing alcohol dehydrogenase LK03_RS18020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK03_RS18020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK03_RS18020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK03_RS18020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK03_RS18030 PF18081 Fanconi anemia-associated nuclease SAP domain LK03_RS18030 PF08774 VRR-NUC domain LK03_RS18035 PF03741 Integral membrane protein TerC family LK03_RS18050 PF00550 Phosphopantetheine attachment site LK03_RS18050 PF08659 KR domain LK03_RS18050 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS18050 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS18050 PF16197 Ketoacyl-synthetase C-terminal extension LK03_RS18050 PF00698 Acyl transferase domain LK03_RS18050 PF14765 Polyketide synthase dehydratase LK03_RS18050 PF08240 Alcohol dehydrogenase GroES-like domain LK03_RS18050 PF00107 Zinc-binding dehydrogenase LK03_RS18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18055 PF03466 LysR substrate binding domain LK03_RS18085 PF13519 von Willebrand factor type A domain LK03_RS18085 PF07728 AAA domain (dynein-related subfamily) LK03_RS18085 PF17863 AAA lid domain LK03_RS18090 PF02514 CobN/Magnesium Chelatase LK03_RS18095 PF07683 Cobalamin synthesis protein cobW C-terminal domain LK03_RS18095 PF02492 CobW/HypB/UreG, nucleotide-binding domain LK03_RS18115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS18120 PF00196 Bacterial regulatory proteins, luxR family LK03_RS18120 PF00072 Response regulator receiver domain LK03_RS18125 PF01627 Hpt domain LK03_RS18125 PF00072 Response regulator receiver domain LK03_RS18125 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS18125 PF00989 PAS fold LK03_RS18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18125 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18130 PF13426 PAS domain LK03_RS18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS18130 PF08447 PAS fold LK03_RS18145 PF02447 GntP family permease LK03_RS18155 PF02899 Phage integrase, N-terminal SAM-like domain LK03_RS18155 PF00589 Phage integrase family LK03_RS18170 PF02321 Outer membrane efflux protein LK03_RS18175 PF00873 AcrB/AcrD/AcrF family LK03_RS18180 PF00873 AcrB/AcrD/AcrF family LK03_RS18185 PF13533 Biotin-lipoyl like LK03_RS18190 PF08534 Redoxin LK03_RS18200 PF13532 2OG-Fe(II) oxygenase superfamily LK03_RS18205 PF03466 LysR substrate binding domain LK03_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS18210 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS18210 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS18215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS18220 PF00596 Class II Aldolase and Adducin N-terminal domain LK03_RS18225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LK03_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS18235 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS18235 PF12911 N-terminal TM domain of oligopeptide transport permease C LK03_RS18240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LK03_RS18240 PF00005 ABC transporter LK03_RS18245 PF00296 Luciferase-like monooxygenase LK03_RS18255 PF13188 PAS domain LK03_RS18255 PF08448 PAS fold LK03_RS18255 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18255 PF00072 Response regulator receiver domain LK03_RS18270 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK03_RS18275 PF12792 CSS motif domain associated with EAL LK03_RS18275 PF00563 EAL domain LK03_RS18285 PF03741 Integral membrane protein TerC family LK03_RS18285 PF03471 Transporter associated domain LK03_RS18290 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18290 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS18290 PF00072 Response regulator receiver domain LK03_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18295 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18295 PF00672 HAMP domain LK03_RS18295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18295 PF00072 Response regulator receiver domain LK03_RS18295 PF01627 Hpt domain LK03_RS18295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS18300 PF01339 CheB methylesterase LK03_RS18305 PF01739 CheR methyltransferase, SAM binding domain LK03_RS18305 PF03705 CheR methyltransferase, all-alpha domain LK03_RS18310 PF00672 HAMP domain LK03_RS18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18310 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS18310 PF00072 Response regulator receiver domain LK03_RS18310 PF01627 Hpt domain LK03_RS18315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18315 PF00072 Response regulator receiver domain LK03_RS18315 PF13188 PAS domain LK03_RS18315 PF08448 PAS fold LK03_RS18315 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS18330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LK03_RS18340 PF08501 Shikimate dehydrogenase substrate binding domain LK03_RS18350 PF00768 D-alanyl-D-alanine carboxypeptidase LK03_RS18355 PF01144 Coenzyme A transferase LK03_RS18360 PF01144 Coenzyme A transferase LK03_RS18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18365 PF03466 LysR substrate binding domain LK03_RS18370 PF00248 Aldo/keto reductase family LK03_RS18375 PF01336 OB-fold nucleic acid binding domain LK03_RS18375 PF02811 PHP domain LK03_RS18375 PF14579 Helix-hairpin-helix motif LK03_RS18375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LK03_RS18375 PF07733 Bacterial DNA polymerase III alpha NTPase domain LK03_RS18390 PF00717 Peptidase S24-like LK03_RS18390 PF01726 LexA DNA binding domain LK03_RS18395 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS18400 PF00072 Response regulator receiver domain LK03_RS18400 PF13188 PAS domain LK03_RS18400 PF08448 PAS fold LK03_RS18400 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18405 PF13411 MerR HTH family regulatory protein LK03_RS18410 PF00682 HMGL-like LK03_RS18415 PF02308 MgtC family LK03_RS18425 PF00392 Bacterial regulatory proteins, gntR family LK03_RS18425 PF00155 Aminotransferase class I and II LK03_RS18435 PF07690 Major Facilitator Superfamily LK03_RS18440 PF00529 HlyD membrane-fusion protein of T1SS LK03_RS18440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LK03_RS18445 PF01047 MarR family LK03_RS18455 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LK03_RS18485 PF00005 ABC transporter LK03_RS18505 PF02627 Carboxymuconolactone decarboxylase family LK03_RS18540 PF07759 Protein of unknown function (DUF1615) LK03_RS18545 PF00975 Thioesterase domain LK03_RS18550 PF03621 MbtH-like protein LK03_RS18560 PF00324 Amino acid permease LK03_RS18565 PF00155 Aminotransferase class I and II LK03_RS18565 PF00392 Bacterial regulatory proteins, gntR family LK03_RS18575 PF03717 Penicillin-binding Protein dimerisation domain LK03_RS18575 PF00905 Penicillin binding protein transpeptidase domain LK03_RS18585 PF13426 PAS domain LK03_RS18585 PF13581 Histidine kinase-like ATPase domain LK03_RS18585 PF07536 HWE histidine kinase LK03_RS18625 PF08447 PAS fold LK03_RS18635 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LK03_RS18635 PF04717 Type VI secretion system, phage-baseplate injector LK03_RS18635 PF13296 Putative type VI secretion system Rhs element Vgr LK03_RS18645 PF03527 RHS protein LK03_RS18645 PF05593 RHS Repeat LK03_RS18670 PF05199 GMC oxidoreductase LK03_RS18670 PF00732 GMC oxidoreductase LK03_RS18675 PF00034 Cytochrome c LK03_RS18675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK03_RS18705 PF00561 alpha/beta hydrolase fold LK03_RS18730 PF00005 ABC transporter LK03_RS18730 PF12848 ABC transporter LK03_RS18735 PF03466 LysR substrate binding domain LK03_RS18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18745 PF03313 Serine dehydratase alpha chain LK03_RS18745 PF03315 Serine dehydratase beta chain LK03_RS18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18750 PF03466 LysR substrate binding domain LK03_RS18760 PF01810 LysE type translocator LK03_RS18765 PF07690 Major Facilitator Superfamily LK03_RS18770 PF07715 TonB-dependent Receptor Plug Domain LK03_RS18770 PF00593 TonB dependent receptor LK03_RS18780 PF17755 UvrA DNA-binding domain LK03_RS18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS18795 PF00072 Response regulator receiver domain LK03_RS18795 PF13426 PAS domain LK03_RS18800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS18800 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS18800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS18805 PF03466 LysR substrate binding domain LK03_RS18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS18810 PF13091 PLD-like domain LK03_RS18815 PF00141 Peroxidase LK03_RS18820 PF00282 Pyridoxal-dependent decarboxylase conserved domain LK03_RS18830 PF01709 Transcriptional regulator LK03_RS18840 PF02659 Putative manganese efflux pump LK03_RS18845 PF03641 Possible lysine decarboxylase LK03_RS18845 PF11892 Domain of unknown function (DUF3412) LK03_RS18845 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LK03_RS18855 PF07715 TonB-dependent Receptor Plug Domain LK03_RS18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LK03_RS18860 PF13426 PAS domain LK03_RS18860 PF08447 PAS fold LK03_RS18865 PF08448 PAS fold LK03_RS18865 PF08447 PAS fold LK03_RS18865 PF00563 EAL domain LK03_RS18865 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS18875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS18875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS18880 PF02798 Glutathione S-transferase, N-terminal domain LK03_RS18885 PF02028 BCCT, betaine/carnitine/choline family transporter LK03_RS18900 PF00892 EamA-like transporter family LK03_RS18915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LK03_RS18915 PF00925 GTP cyclohydrolase II LK03_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS18930 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS18935 PF00005 ABC transporter LK03_RS18935 PF08402 TOBE domain LK03_RS18970 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS18975 PF02080 TrkA-C domain LK03_RS18975 PF03600 Citrate transporter LK03_RS18980 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS18985 PF07690 Major Facilitator Superfamily LK03_RS18990 PF13533 Biotin-lipoyl like LK03_RS18995 PF02321 Outer membrane efflux protein LK03_RS19025 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS19025 PF02861 Clp amino terminal domain, pathogenicity island component LK03_RS19025 PF17871 AAA lid domain LK03_RS19025 PF07724 AAA domain (Cdc48 subfamily) LK03_RS19025 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS19045 PF00534 Glycosyl transferases group 1 LK03_RS19045 PF08323 Starch synthase catalytic domain LK03_RS19050 PF00128 Alpha amylase, catalytic domain LK03_RS19050 PF11941 Domain of unknown function (DUF3459) LK03_RS19050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK03_RS19055 PF02446 4-alpha-glucanotransferase LK03_RS19060 PF00128 Alpha amylase, catalytic domain LK03_RS19070 PF00128 Alpha amylase, catalytic domain LK03_RS19070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK03_RS19075 PF03372 Endonuclease/Exonuclease/phosphatase family LK03_RS19080 PF02626 Carboxyltransferase domain, subdomain A and B LK03_RS19090 PF03746 LamB/YcsF family LK03_RS19095 PF03466 LysR substrate binding domain LK03_RS19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS19105 PF00005 ABC transporter LK03_RS19120 PF02806 Alpha amylase, C-terminal all-beta domain LK03_RS19120 PF00128 Alpha amylase, catalytic domain LK03_RS19120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LK03_RS19125 PF00128 Alpha amylase, catalytic domain LK03_RS19125 PF16657 Maltogenic Amylase, C-terminal domain LK03_RS19130 PF11896 Domain of unknown function (DUF3416) LK03_RS19130 PF00128 Alpha amylase, catalytic domain LK03_RS19135 PF13193 AMP-binding enzyme C-terminal domain LK03_RS19135 PF00501 AMP-binding enzyme LK03_RS19140 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS19140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS19140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS19145 PF01039 Carboxyl transferase domain LK03_RS19150 PF00378 Enoyl-CoA hydratase/isomerase LK03_RS19155 PF02785 Biotin carboxylase C-terminal domain LK03_RS19155 PF00289 Biotin carboxylase, N-terminal domain LK03_RS19155 PF00364 Biotin-requiring enzyme LK03_RS19155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LK03_RS19160 PF00717 Peptidase S24-like LK03_RS19160 PF01381 Helix-turn-helix LK03_RS19175 PF00246 Zinc carboxypeptidase LK03_RS19175 PF18027 Cytosolic carboxypeptidase N-terminal domain LK03_RS19180 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS19180 PF00360 Phytochrome region LK03_RS19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS19180 PF01590 GAF domain LK03_RS19180 PF08446 PAS fold LK03_RS19185 PF00072 Response regulator receiver domain LK03_RS19185 PF00486 Transcriptional regulatory protein, C terminal LK03_RS19190 PF13188 PAS domain LK03_RS19190 PF08448 PAS fold LK03_RS19190 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS19190 PF00072 Response regulator receiver domain LK03_RS19195 PF07995 Glucose / Sorbosone dehydrogenase LK03_RS19205 PF10414 Sirohaem synthase dimerisation region LK03_RS19205 PF14824 Sirohaem biosynthesis protein central LK03_RS19205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LK03_RS19210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LK03_RS19210 PF02403 Seryl-tRNA synthetase N-terminal domain LK03_RS19215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LK03_RS19220 PF16193 AAA C-terminal domain LK03_RS19220 PF12002 MgsA AAA+ ATPase C terminal LK03_RS19220 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS19225 PF03548 Outer membrane lipoprotein carrier protein LolA LK03_RS19230 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LK03_RS19230 PF09397 Ftsk gamma domain LK03_RS19230 PF17854 FtsK alpha domain LK03_RS19230 PF01580 FtsK/SpoIIIE family LK03_RS19235 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LK03_RS19240 PF04376 Arginine-tRNA-protein transferase, N terminus LK03_RS19240 PF04377 Arginine-tRNA-protein transferase, C terminus LK03_RS19245 PF01176 Translation initiation factor 1A / IF-1 LK03_RS19250 PF10431 C-terminal, D2-small domain, of ClpB protein LK03_RS19250 PF02861 Clp amino terminal domain, pathogenicity island component LK03_RS19250 PF17871 AAA lid domain LK03_RS19250 PF07724 AAA domain (Cdc48 subfamily) LK03_RS19250 PF00004 ATPase family associated with various cellular activities (AAA) LK03_RS19255 PF02617 ATP-dependent Clp protease adaptor protein ClpS LK03_RS19260 PF00313 'Cold-shock' DNA-binding domain LK03_RS19265 PF03971 Monomeric isocitrate dehydrogenase LK03_RS19270 PF00293 NUDIX domain LK03_RS19280 PF04356 Protein of unknown function (DUF489) LK03_RS19285 PF08328 Adenylosuccinate lyase C-terminal LK03_RS19285 PF00206 Lyase LK03_RS19290 PF08007 Cupin superfamily protein LK03_RS19295 PF13673 Acetyltransferase (GNAT) domain LK03_RS19300 PF01131 DNA topoisomerase LK03_RS19300 PF01751 Toprim domain LK03_RS19305 PF00324 Amino acid permease LK03_RS19310 PF03466 LysR substrate binding domain LK03_RS19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS19315 PF00202 Aminotransferase class-III LK03_RS19330 PF01740 STAS domain LK03_RS19330 PF00916 Sulfate permease family LK03_RS19345 PF00463 Isocitrate lyase family LK03_RS19350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LK03_RS19355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LK03_RS19360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LK03_RS19360 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LK03_RS19370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LK03_RS19370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LK03_RS19375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LK03_RS19375 PF00384 Molybdopterin oxidoreductase LK03_RS19375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LK03_RS19380 PF00146 NADH dehydrogenase LK03_RS19385 PF12838 4Fe-4S dicluster domain LK03_RS19390 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LK03_RS19395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LK03_RS19400 PF00361 Proton-conducting membrane transporter LK03_RS19400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LK03_RS19405 PF00361 Proton-conducting membrane transporter LK03_RS19410 PF00361 Proton-conducting membrane transporter LK03_RS19430 PF03472 Autoinducer binding domain LK03_RS19430 PF00196 Bacterial regulatory proteins, luxR family LK03_RS19435 PF07660 Secretin and TonB N terminus short domain LK03_RS19435 PF07715 TonB-dependent Receptor Plug Domain LK03_RS19435 PF00593 TonB dependent receptor LK03_RS19440 PF01594 AI-2E family transporter LK03_RS19445 PF16325 Peptidase family U32 C-terminal domain LK03_RS19445 PF01136 Peptidase family U32 LK03_RS19455 PF09335 SNARE associated Golgi protein LK03_RS19460 PF03969 AFG1-like ATPase LK03_RS19475 PF03969 AFG1-like ATPase LK03_RS19480 PF03466 LysR substrate binding domain LK03_RS19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS19485 PF00571 CBS domain LK03_RS19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS19495 PF00072 Response regulator receiver domain LK03_RS19495 PF00486 Transcriptional regulatory protein, C terminal LK03_RS19510 PF01242 6-pyruvoyl tetrahydropterin synthase LK03_RS19525 PF06434 Aconitate hydratase 2 N-terminus LK03_RS19525 PF11791 Aconitate B N-terminal domain LK03_RS19525 PF00330 Aconitase family (aconitate hydratase) LK03_RS19530 PF02687 FtsX-like permease family LK03_RS19530 PF12704 MacB-like periplasmic core domain LK03_RS19535 PF00005 ABC transporter LK03_RS19540 PF02687 FtsX-like permease family LK03_RS19540 PF12704 MacB-like periplasmic core domain LK03_RS19550 PF03009 Glycerophosphoryl diester phosphodiesterase family LK03_RS19555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS19555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LK03_RS19560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LK03_RS19560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LK03_RS19575 PF00176 SNF2 family N-terminal domain LK03_RS19575 PF00271 Helicase conserved C-terminal domain LK03_RS19575 PF12419 SNF2 Helicase protein LK03_RS19580 PF00933 Glycosyl hydrolase family 3 N terminal domain LK03_RS19585 PF00440 Bacterial regulatory proteins, tetR family LK03_RS19590 PF01726 LexA DNA binding domain LK03_RS19590 PF00717 Peptidase S24-like LK03_RS19595 PF03846 Cell division inhibitor SulA LK03_RS19610 PF01131 DNA topoisomerase LK03_RS19610 PF01396 Topoisomerase DNA binding C4 zinc finger LK03_RS19610 PF08272 Topoisomerase I zinc-ribbon-like LK03_RS19610 PF01751 Toprim domain LK03_RS19620 PF02803 Thiolase, C-terminal domain LK03_RS19620 PF00108 Thiolase, N-terminal domain LK03_RS19625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LK03_RS19625 PF00378 Enoyl-CoA hydratase/isomerase LK03_RS19625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LK03_RS19635 PF00582 Universal stress protein family LK03_RS19640 PF00005 ABC transporter LK03_RS19640 PF16326 ABC transporter C-terminal domain LK03_RS19640 PF12848 ABC transporter LK03_RS19645 PF14718 Soluble lytic murein transglycosylase L domain LK03_RS19645 PF01464 Transglycosylase SLT domain LK03_RS19650 PF11412 Disulphide bond corrector protein DsbC LK03_RS19650 PF02683 Cytochrome C biogenesis protein transmembrane region LK03_RS19655 PF00578 AhpC/TSA family LK03_RS19660 PF13098 Thioredoxin-like domain LK03_RS19665 PF00668 Condensation domain LK03_RS19665 PF13193 AMP-binding enzyme C-terminal domain LK03_RS19665 PF00501 AMP-binding enzyme LK03_RS19665 PF00550 Phosphopantetheine attachment site LK03_RS19665 PF00668 Condensation domain LK03_RS19665 PF13193 AMP-binding enzyme C-terminal domain LK03_RS19665 PF00550 Phosphopantetheine attachment site LK03_RS19665 PF00501 AMP-binding enzyme LK03_RS19690 PF06865 Pyrimidine/purine nucleoside phosphorylase LK03_RS19700 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK03_RS19715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK03_RS19715 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LK03_RS19720 PF00115 Cytochrome C and Quinol oxidase polypeptide I LK03_RS19735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LK03_RS19735 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LK03_RS19740 PF12801 4Fe-4S binding domain LK03_RS19740 PF13746 4Fe-4S dicluster domain LK03_RS19740 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LK03_RS19750 PF00403 Heavy-metal-associated domain LK03_RS19765 PF06969 HemN C-terminal domain LK03_RS19765 PF04055 Radical SAM superfamily LK03_RS19770 PF00027 Cyclic nucleotide-binding domain LK03_RS19770 PF13545 Crp-like helix-turn-helix domain LK03_RS19775 PF00156 Phosphoribosyl transferase domain LK03_RS19780 PF13662 Toprim domain LK03_RS19780 PF02132 RecR protein LK03_RS19785 PF02575 YbaB/EbfC DNA-binding family LK03_RS19790 PF12169 DNA polymerase III subunits gamma and tau domain III LK03_RS19790 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LK03_RS19790 PF12170 DNA polymerase III tau subunit V interacting with alpha LK03_RS19795 PF07660 Secretin and TonB N terminus short domain LK03_RS19795 PF07715 TonB-dependent Receptor Plug Domain LK03_RS19795 PF00593 TonB dependent receptor LK03_RS19820 PF01609 Transposase DDE domain LK03_RS19820 PF05598 Transposase domain (DUF772) LK03_RS19825 PF00665 Integrase core domain LK03_RS19830 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LK03_RS19830 PF12826 Helix-hairpin-helix motif LK03_RS19830 PF03120 NAD-dependent DNA ligase OB-fold domain LK03_RS19830 PF01653 NAD-dependent DNA ligase adenylation domain LK03_RS19830 PF00533 BRCA1 C Terminus (BRCT) domain LK03_RS19835 PF04354 ZipA, C-terminal FtsZ-binding domain LK03_RS19840 PF02463 RecF/RecN/SMC N terminal domain LK03_RS19850 PF00111 2Fe-2S iron-sulfur cluster binding domain LK03_RS19850 PF01799 [2Fe-2S] binding domain LK03_RS19855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LK03_RS19855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LK03_RS19865 PF01979 Amidohydrolase family LK03_RS19875 PF00860 Permease family LK03_RS19895 PF07730 Histidine kinase LK03_RS19895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS19900 PF00072 Response regulator receiver domain LK03_RS19900 PF00196 Bacterial regulatory proteins, luxR family LK03_RS19905 PF00781 Diacylglycerol kinase catalytic domain LK03_RS19910 PF00994 Probable molybdopterin binding domain LK03_RS19910 PF03454 MoeA C-terminal region (domain IV) LK03_RS19910 PF03453 MoeA N-terminal region (domain I and II) LK03_RS19915 PF00994 Probable molybdopterin binding domain LK03_RS19930 PF00664 ABC transporter transmembrane region LK03_RS19930 PF00005 ABC transporter LK03_RS19940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LK03_RS19940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LK03_RS19940 PF11890 Domain of unknown function (DUF3410) LK03_RS19945 PF01206 Sulfurtransferase TusA LK03_RS19950 PF18125 RlmM ferredoxin-like domain LK03_RS19950 PF01728 FtsJ-like methyltransferase LK03_RS19955 PF00694 Aconitase C-terminal domain LK03_RS19955 PF00330 Aconitase family (aconitate hydratase) LK03_RS19960 PF05088 Bacterial NAD-glutamate dehydrogenase LK03_RS19975 PF17863 AAA lid domain LK03_RS19975 PF07726 ATPase family associated with various cellular activities (AAA) LK03_RS19980 PF01882 Protein of unknown function DUF58 LK03_RS20010 PF00881 Nitroreductase family LK03_RS20020 PF12833 Helix-turn-helix domain LK03_RS20025 PF00202 Aminotransferase class-III LK03_RS20030 PF00171 Aldehyde dehydrogenase family LK03_RS20090 PF00005 ABC transporter LK03_RS20115 PF01557 Fumarylacetoacetate (FAA) hydrolase family LK03_RS20120 PF01494 FAD binding domain LK03_RS20125 PF12697 Alpha/beta hydrolase family LK03_RS20145 PF00106 short chain dehydrogenase LK03_RS20150 PF00171 Aldehyde dehydrogenase family LK03_RS20155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LK03_RS20155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LK03_RS20165 PF01810 LysE type translocator LK03_RS20175 PF00149 Calcineurin-like phosphoesterase LK03_RS20175 PF12320 Type 5 capsule protein repressor C-terminal domain LK03_RS20185 PF10282 Lactonase, 7-bladed beta-propeller LK03_RS20210 PF00202 Aminotransferase class-III LK03_RS20215 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS20220 PF00528 Binding-protein-dependent transport system inner membrane component LK03_RS20225 PF00005 ABC transporter LK03_RS20245 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LK03_RS20245 PF01433 Peptidase family M1 domain LK03_RS20245 PF11940 Domain of unknown function (DUF3458) Ig-like fold LK03_RS20255 PF07023 Protein of unknown function (DUF1315) LK03_RS20260 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LK03_RS20260 PF01694 Rhomboid family LK03_RS20265 PF00149 Calcineurin-like phosphoesterase LK03_RS20270 PF01513 ATP-NAD kinase LK03_RS20280 PF01292 Prokaryotic cytochrome b561 LK03_RS20290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LK03_RS20290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LK03_RS20335 PF01053 Cys/Met metabolism PLP-dependent enzyme LK03_RS20340 PF00156 Phosphoribosyl transferase domain LK03_RS20345 PF02674 Colicin V production protein LK03_RS20355 PF02875 Mur ligase family, glutamate ligase domain LK03_RS20355 PF08245 Mur ligase middle domain LK03_RS20360 PF17848 Acetyl-coA carboxylase zinc finger domain LK03_RS20360 PF01039 Carboxyl transferase domain LK03_RS20365 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LK03_RS20370 PF01416 tRNA pseudouridine synthase LK03_RS20380 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK03_RS20380 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK03_RS20385 PF02774 Semialdehyde dehydrogenase, dimerisation domain LK03_RS20385 PF01118 Semialdehyde dehydrogenase, NAD binding domain LK03_RS20390 PF00180 Isocitrate/isopropylmalate dehydrogenase LK03_RS20395 PF08241 Methyltransferase domain LK03_RS20400 PF00694 Aconitase C-terminal domain LK03_RS20405 PF00330 Aconitase family (aconitate hydratase) LK03_RS20410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS20415 PF00563 EAL domain LK03_RS20415 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS20415 PF03707 Bacterial signalling protein N terminal repeat LK03_RS20420 PF00011 Hsp20/alpha crystallin family LK03_RS20425 PF01207 Dihydrouridine synthase (Dus) LK03_RS20465 PF00749 tRNA synthetases class I (E and Q), catalytic domain LK03_RS20470 PF17757 UvrB interaction domain LK03_RS20470 PF02151 UvrB/uvrC motif LK03_RS20470 PF04851 Type III restriction enzyme, res subunit LK03_RS20470 PF00271 Helicase conserved C-terminal domain LK03_RS20470 PF12344 Ultra-violet resistance protein B LK03_RS20475 PF00155 Aminotransferase class I and II LK03_RS20495 PF00440 Bacterial regulatory proteins, tetR family LK03_RS20500 PF01026 TatD related DNase LK03_RS20505 PF09115 DNA polymerase III, delta subunit, C terminal LK03_RS20515 PF02618 YceG-like family LK03_RS20520 PF01063 Amino-transferase class IV LK03_RS20525 PF00109 Beta-ketoacyl synthase, N-terminal domain LK03_RS20525 PF02801 Beta-ketoacyl synthase, C-terminal domain LK03_RS20530 PF00550 Phosphopantetheine attachment site LK03_RS20540 PF00698 Acyl transferase domain LK03_RS20545 PF02504 Fatty acid synthesis protein LK03_RS20550 PF01783 Ribosomal L32p protein family LK03_RS20555 PF02620 Large ribosomal RNA subunit accumulation protein YceD LK03_RS20560 PF02545 Maf-like protein LK03_RS20565 PF06965 Na+/H+ antiporter 1 LK03_RS20565 PF01343 Peptidase family S49 LK03_RS20570 PF13419 Haloacid dehalogenase-like hydrolase LK03_RS20575 PF01479 S4 domain LK03_RS20575 PF00849 RNA pseudouridylate synthase LK03_RS20580 PF12111 Polyribonucleotide phosphorylase C terminal LK03_RS20580 PF10150 Ribonuclease E/G family LK03_RS20580 PF00575 S1 RNA binding domain LK03_RS20590 PF13333 Integrase core domain LK03_RS20590 PF00665 Integrase core domain LK03_RS20590 PF13276 HTH-like domain LK03_RS20595 PF01565 FAD binding domain LK03_RS20595 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LK03_RS20600 PF01451 Low molecular weight phosphotyrosine protein phosphatase LK03_RS20605 PF02348 Cytidylyltransferase LK03_RS20610 PF03966 Trm112p-like protein LK03_RS20615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LK03_RS20620 PF02472 Biopolymer transport protein ExbD/TolR LK03_RS20625 PF01618 MotA/TolQ/ExbB proton channel family LK03_RS20630 PF00753 Metallo-beta-lactamase superfamily LK03_RS20630 PF03772 Competence protein LK03_RS20635 PF01061 ABC-2 type transporter LK03_RS20640 PF00005 ABC transporter LK03_RS20645 PF13417 Glutathione S-transferase, N-terminal domain LK03_RS20645 PF00043 Glutathione S-transferase, C-terminal domain LK03_RS20650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LK03_RS20650 PF02770 Acyl-CoA dehydrogenase, middle domain LK03_RS20650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LK03_RS20650 PF09317 Domain of unknown function (DUF1974) LK03_RS20670 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LK03_RS20670 PF02753 Pili assembly chaperone PapD, C-terminal domain LK03_RS20720 PF13953 PapC C-terminal domain LK03_RS20720 PF00577 Outer membrane usher protein LK03_RS20720 PF13954 PapC N-terminal domain LK03_RS20725 PF00419 Fimbrial protein LK03_RS20760 PF13185 GAF domain LK03_RS20770 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS20770 PF01627 Hpt domain LK03_RS20770 PF00072 Response regulator receiver domain LK03_RS20770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LK03_RS20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS20770 PF00672 HAMP domain LK03_RS20775 PF00255 Glutathione peroxidase LK03_RS20780 PF01641 SelR domain LK03_RS20785 PF00155 Aminotransferase class I and II LK03_RS20790 PF01435 Peptidase family M48 LK03_RS20795 PF05724 Thiopurine S-methyltransferase (TPMT) LK03_RS20800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LK03_RS20805 PF03880 DbpA RNA binding domain LK03_RS20805 PF00270 DEAD/DEAH box helicase LK03_RS20805 PF00271 Helicase conserved C-terminal domain LK03_RS20815 PF01474 Class-II DAHP synthetase family LK03_RS20825 PF01047 MarR family LK03_RS20830 PF01132 Elongation factor P (EF-P) OB domain LK03_RS20830 PF08207 Elongation factor P (EF-P) KOW-like domain LK03_RS20830 PF09285 Elongation factor P, C-terminal LK03_RS20850 PF07690 Major Facilitator Superfamily LK03_RS20870 PF00270 DEAD/DEAH box helicase LK03_RS20870 PF16124 RecQ zinc-binding LK03_RS20870 PF00570 HRDC domain LK03_RS20870 PF09382 RQC domain LK03_RS20870 PF00271 Helicase conserved C-terminal domain LK03_RS20880 PF04304 Protein of unknown function (DUF454) LK03_RS20885 PF00107 Zinc-binding dehydrogenase LK03_RS20885 PF16884 N-terminal domain of oxidoreductase LK03_RS20890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LK03_RS20900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LK03_RS20900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LK03_RS20900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LK03_RS20900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LK03_RS20905 PF01061 ABC-2 type transporter LK03_RS20910 PF00005 ABC transporter LK03_RS20920 PF02563 Polysaccharide biosynthesis/export protein LK03_RS20920 PF10531 SLBB domain LK03_RS20920 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LK03_RS20925 PF01050 Mannose-6-phosphate isomerase LK03_RS20925 PF00483 Nucleotidyl transferase LK03_RS20930 PF05159 Capsule polysaccharide biosynthesis protein LK03_RS20940 PF00793 DAHP synthetase I family LK03_RS20970 PF01380 SIS domain LK03_RS20970 PF00571 CBS domain LK03_RS20975 PF00456 Transketolase, thiamine diphosphate binding domain LK03_RS20975 PF02780 Transketolase, C-terminal domain LK03_RS20975 PF02779 Transketolase, pyrimidine binding domain LK03_RS20985 PF05159 Capsule polysaccharide biosynthesis protein LK03_RS20990 PF05159 Capsule polysaccharide biosynthesis protein LK03_RS20995 PF00106 short chain dehydrogenase LK03_RS21010 PF05159 Capsule polysaccharide biosynthesis protein LK03_RS21020 PF13183 4Fe-4S dicluster domain LK03_RS21020 PF01565 FAD binding domain LK03_RS21020 PF02913 FAD linked oxidases, C-terminal domain LK03_RS21025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS21025 PF03466 LysR substrate binding domain LK03_RS21030 PF00324 Amino acid permease LK03_RS21035 PF00849 RNA pseudouridylate synthase LK03_RS21035 PF01479 S4 domain LK03_RS21040 PF04079 Segregation and condensation complex subunit ScpB LK03_RS21045 PF02616 Segregation and condensation protein ScpA LK03_RS21050 PF01300 Telomere recombination LK03_RS21055 PF02811 PHP domain LK03_RS21060 PF04279 Intracellular septation protein A LK03_RS21065 PF03795 YCII-related domain LK03_RS21070 PF00486 Transcriptional regulatory protein, C terminal LK03_RS21070 PF00072 Response regulator receiver domain LK03_RS21080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS21080 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS21080 PF00672 HAMP domain LK03_RS21080 PF16750 Sensor domain of 2-component histidine kinase LK03_RS21085 PF00072 Response regulator receiver domain LK03_RS21085 PF00196 Bacterial regulatory proteins, luxR family LK03_RS21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS21090 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS21090 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS21090 PF00072 Response regulator receiver domain LK03_RS21090 PF01627 Hpt domain LK03_RS21090 PF00989 PAS fold LK03_RS21095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LK03_RS21095 PF02753 Pili assembly chaperone PapD, C-terminal domain LK03_RS21105 PF13954 PapC N-terminal domain LK03_RS21105 PF13953 PapC C-terminal domain LK03_RS21105 PF00577 Outer membrane usher protein LK03_RS21110 PF02753 Pili assembly chaperone PapD, C-terminal domain LK03_RS21110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LK03_RS21120 PF00881 Nitroreductase family LK03_RS21125 PF02386 Cation transport protein LK03_RS21130 PF12833 Helix-turn-helix domain LK03_RS21130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LK03_RS21145 PF03631 Virulence factor BrkB LK03_RS21155 PF17783 CvfB-like winged helix domain LK03_RS21155 PF13509 S1 domain LK03_RS21170 PF00990 Diguanylate cyclase, GGDEF domain LK03_RS21170 PF00563 EAL domain LK03_RS21170 PF08448 PAS fold LK03_RS21175 PF00664 ABC transporter transmembrane region LK03_RS21175 PF00005 ABC transporter LK03_RS21185 PF00581 Rhodanese-like domain LK03_RS21185 PF17773 UPF0176 acylphosphatase like domain LK03_RS21190 PF01722 BolA-like protein LK03_RS21200 PF00206 Lyase LK03_RS21200 PF10415 Fumarase C C-terminus LK03_RS21205 PF00892 EamA-like transporter family LK03_RS21210 PF03976 Polyphosphate kinase 2 (PPK2) LK03_RS21215 PF01266 FAD dependent oxidoreductase LK03_RS21215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LK03_RS21220 PF13537 Glutamine amidotransferase domain LK03_RS21220 PF00733 Asparagine synthase LK03_RS21225 PF08443 RimK-like ATP-grasp domain LK03_RS21225 PF08245 Mur ligase middle domain LK03_RS21225 PF02875 Mur ligase family, glutamate ligase domain LK03_RS21230 PF05343 M42 glutamyl aminopeptidase LK03_RS21235 PF06794 Uncharacterised protein family (UPF0270) LK03_RS21240 PF02599 Global regulator protein family LK03_RS21245 PF03746 LamB/YcsF family LK03_RS21250 PF02626 Carboxyltransferase domain, subdomain A and B LK03_RS21255 PF02682 Carboxyltransferase domain, subdomain C and D LK03_RS21260 PF08946 Osmosensory transporter coiled coil LK03_RS21260 PF00083 Sugar (and other) transporter LK03_RS21270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS21270 PF03466 LysR substrate binding domain LK03_RS21275 PF00561 alpha/beta hydrolase fold LK03_RS21275 PF00106 short chain dehydrogenase LK03_RS21285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS21285 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS21285 PF00989 PAS fold LK03_RS21285 PF00497 Bacterial extracellular solute-binding proteins, family 3 LK03_RS21285 PF01627 Hpt domain LK03_RS21285 PF00072 Response regulator receiver domain LK03_RS21290 PF00072 Response regulator receiver domain LK03_RS21290 PF00196 Bacterial regulatory proteins, luxR family LK03_RS21320 PF00474 Sodium:solute symporter family LK03_RS21325 PF04341 Protein of unknown function, DUF485 LK03_RS21330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LK03_RS21330 PF00672 HAMP domain LK03_RS21330 PF00512 His Kinase A (phospho-acceptor) domain LK03_RS21335 PF02646 RmuC family LK03_RS21355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LK03_RS21360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LK03_RS21360 PF03466 LysR substrate binding domain LK03_RS21370 PF00255 Glutathione peroxidase LK03_RS21385 PF02654 Cobalamin-5-phosphate synthase LK03_RS21390 PF00300 Histidine phosphatase superfamily (branch 1) LK03_RS21395 PF02277 Phosphoribosyltransferase LK03_RS21400 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LK03_RS21405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LK03_RS21405 PF07685 CobB/CobQ-like glutamine amidotransferase domain LK03_RS21410 PF00155 Aminotransferase class I and II LK03_RS21415 PF17113 Regulatory signalling modulator protein AmpE LK03_RS21415 PF03186 CobD/Cbib protein LK03_RS21420 PF00881 Nitroreductase family LK03_RS21425 PF07685 CobB/CobQ-like glutamine amidotransferase domain LK03_RS21425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LK03_RS21430 PF12557 Cob(I)alamin adenosyltransferase N terminal LK03_RS21430 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LK03_RS21435 PF07995 Glucose / Sorbosone dehydrogenase LK03_RS21440 PF00877 NlpC/P60 family LK03_RS21445 PF00877 NlpC/P60 family LK03_RS21450 PF00308 Bacterial dnaA protein LK03_RS21460 PF02769 AIR synthase related protein, C-terminal domain LK03_RS21460 PF00586 AIR synthase related protein, N-terminal domain LK03_RS21465 PF00551 Formyl transferase LK03_RS21495 PF00270 DEAD/DEAH box helicase LK03_RS21495 PF00271 Helicase conserved C-terminal domain LK03_RS21515 PF00472 RF-1 domain LK03_RS21535 PF04116 Fatty acid hydroxylase superfamily LK03_RS21565 PF13332 Hemagglutinin repeat LK03_RS21565 PF05594 Haemagluttinin repeat LK03_RS21565 PF04829 Pre-toxin domain with VENN motif LK03_RS21565 PF05860 haemagglutination activity domain LK03_RS21565 PF14436 Bacterial EndoU nuclease LK03_RS21615 PF12833 Helix-turn-helix domain LK03_RS21615 PF02311 AraC-like ligand binding domain LK03_RS21645 PF00990 Diguanylate cyclase, GGDEF domain