locus-tag	class	description
F1C79_RS00055	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
F1C79_RS00090	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
F1C79_RS00095	COG2207	Transcriptional regulator
F1C79_RS00105	COG4206	TonB-dependent receptor
F1C79_RS00115	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
F1C79_RS00125	COG0583	DNA-binding transcription factor activity
F1C79_RS00130	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
F1C79_RS00140	COG4628	conserved protein (DUF2132)
F1C79_RS00155	COG4106	trans-aconitate 2-methyltransferase activity
F1C79_RS00160	COG1113	amino acid transport
F1C79_RS00170	COG0501	Belongs to the peptidase M48B family
F1C79_RS00175	COG1704	LemA family
F1C79_RS00180	COG1335	isochorismatase
F1C79_RS00205	COG0662	Cupin 2, conserved barrel domain protein
F1C79_RS00215	COG4206	TonB-dependent receptor
F1C79_RS00230	COG1181	Belongs to the D-alanine--D-alanine ligase family
F1C79_RS00235	COG0656	L-ascorbic acid biosynthetic process
F1C79_RS00245	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
F1C79_RS00275	COG0583	DNA-binding transcription factor activity
F1C79_RS00290	COG0069	glutamate synthase activity
F1C79_RS00295	COG1760	l-serine dehydratase
F1C79_RS00310	COG0531	amino acid
F1C79_RS00325	COG0583	DNA-binding transcription factor activity
F1C79_RS00345	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
F1C79_RS00350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS00355	COG0765	amino acid transport
F1C79_RS00360	COG1126	abc transporter atp-binding protein
F1C79_RS00390	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
F1C79_RS00415	COG0243	molybdopterin cofactor binding
F1C79_RS00420	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
F1C79_RS00440	COG0450	alkyl hydroperoxide reductase
F1C79_RS00465	COG0346	lactoylglutathione lyase activity
F1C79_RS00470	COG1611	Belongs to the LOG family
F1C79_RS00480	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
F1C79_RS00525	COG0754	glutathionylspermidine amidase activity
F1C79_RS00545	COG0489	protein tyrosine kinase activity
F1C79_RS00580	COG0653	protein targeting
F1C79_RS00595	COG2860	membrane
F1C79_RS00665	COG3133	Outer membrane lipoprotein
F1C79_RS00670	COG2111	Na H antiporter
F1C79_RS00670	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
F1C79_RS00675	COG1006	Multisubunit Na H antiporter MnhC subunit
F1C79_RS00680	COG0651	ATP synthesis coupled electron transport
F1C79_RS00685	COG1863	multisubunit Na H antiporter MnhE subunit
F1C79_RS00690	COG2212	antiporter activity
F1C79_RS00695	COG1320	monovalent cation:proton antiporter activity
F1C79_RS00710	COG1794	racemase activity, acting on amino acids and derivatives
F1C79_RS00725	COG3189	MarR family transcriptional regulator
F1C79_RS00735	COG0583	DNA-binding transcription factor activity
F1C79_RS00765	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS00770	COG1802	Transcriptional regulator
F1C79_RS00800	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
F1C79_RS00835	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS00860	COG0840	transmembrane signaling receptor activity
F1C79_RS00870	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
F1C79_RS00875	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS00880	COG1177	transmembrane transport
F1C79_RS00885	COG3842	ATPase activity
F1C79_RS00890	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
F1C79_RS00900	COG0583	DNA-binding transcription factor activity
F1C79_RS00910	COG2979	Protein of unknown function (DUF533)
F1C79_RS00915	COG4574	serine-type endopeptidase inhibitor activity
F1C79_RS00945	COG3831	ATPase activity
F1C79_RS00945	COG4884	unkown
F1C79_RS00980	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
F1C79_RS01005	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
F1C79_RS01015	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS01025	COG3842	ATPase activity
F1C79_RS01035	COG2186	Transcriptional regulator
F1C79_RS01040	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS01050	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS01055	COG2267	carboxylic ester hydrolase activity
F1C79_RS01080	COG1238	metal cluster binding
F1C79_RS01085	COG0840	transmembrane signaling receptor activity
F1C79_RS01115	COG2203	Gaf domain
F1C79_RS01115	COG3706	GGDEF domain
F1C79_RS01115	COG4251	negative regulation of phosphorylation
F1C79_RS01115	COG5001	Diguanylate cyclase
F1C79_RS01145	COG1073	alpha beta
F1C79_RS01180	COG0789	Transcriptional regulator
F1C79_RS01195	COG0563	adenylate kinase activity
F1C79_RS01200	COG1214	PFAM Peptidase M22, glycoprotease
F1C79_RS01210	COG1801	Protein of unknown function DUF72
F1C79_RS01225	COG0742	ribosomal rna small subunit methyltransferase
F1C79_RS01230	COG1309	transcriptional regulator
F1C79_RS01285	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
F1C79_RS01305	COG1215	transferase activity, transferring glycosyl groups
F1C79_RS01320	COG0250	Participates in transcription elongation, termination and antitermination
F1C79_RS01325	COG0489	protein tyrosine kinase activity
F1C79_RS01325	COG3206	protein involved in exopolysaccharide biosynthesis
F1C79_RS01330	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
F1C79_RS01365	COG2226	methyltransferase
F1C79_RS01385	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
F1C79_RS01410	COG1393	Belongs to the ArsC family
F1C79_RS01415	COG0025	NhaP-type Na H and K H
F1C79_RS01420	COG0436	Aminotransferase
F1C79_RS01430	COG0024	Methionine aminopeptidase
F1C79_RS01440	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
F1C79_RS01465	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
F1C79_RS01475	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
F1C79_RS01505	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
F1C79_RS01515	COG0825	malonyl-CoA metabolic process
F1C79_RS01530	COG2877	3-deoxy-8-phosphooctulonate synthase activity
F1C79_RS01535	COG0148	phosphopyruvate hydratase activity
F1C79_RS01550	COG0425	Belongs to the sulfur carrier protein TusA family
F1C79_RS01555	COG2391	methyltransferase activity
F1C79_RS01565	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
F1C79_RS01570	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
F1C79_RS01575	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
F1C79_RS01580	COG0585	pseudouridine synthase activity
F1C79_RS01765	COG0305	Participates in initiation and elongation during chromosome replication
F1C79_RS01940	COG3179	chitinase
F1C79_RS01955	COG2135	peptidase activity
F1C79_RS01965	COG1546	Belongs to the CinA family
F1C79_RS01985	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
F1C79_RS01995	COG3530	Putative quorum-sensing-regulated virulence factor
F1C79_RS02010	COG3148	PFAM DTW domain containing protein
F1C79_RS02070	COG4807	Protein conserved in bacteria
F1C79_RS02095	COG3278	Belongs to the heme-copper respiratory oxidase family
F1C79_RS02100	COG1051	belongs to the nudix hydrolase family
F1C79_RS02115	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS02125	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
F1C79_RS02130	COG0402	S-adenosylhomocysteine deaminase activity
F1C79_RS02155	COG0529	Catalyzes the synthesis of activated sulfate
F1C79_RS02165	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
F1C79_RS02190	COG0791	NLP P60 protein
F1C79_RS02200	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
F1C79_RS02205	COG0513	Belongs to the DEAD box helicase family
F1C79_RS02230	COG0583	DNA-binding transcription factor activity
F1C79_RS02325	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
F1C79_RS02330	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
F1C79_RS02365	COG2239	Acts as a magnesium transporter
F1C79_RS02390	COG3706	GGDEF domain
F1C79_RS02405	COG1215	transferase activity, transferring glycosyl groups
F1C79_RS02410	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
F1C79_RS02420	COG3842	ATPase activity
F1C79_RS02450	COG2154	pterin-4-alpha-carbinolamine dehydratase
F1C79_RS02470	COG1201	RNA secondary structure unwinding
F1C79_RS02490	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
F1C79_RS02495	COG0778	Nitroreductase
F1C79_RS02515	COG0745	RESPONSE REGULATOR receiver
F1C79_RS02525	COG2350	Protein conserved in bacteria
F1C79_RS02530	COG2917	probably involved in intracellular septation
F1C79_RS02535	COG0613	PHP domain protein
F1C79_RS02545	COG0180	Tryptophanyl-tRNA synthetase
F1C79_RS02555	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
F1C79_RS02600	COG1653	transport
F1C79_RS02605	COG1175	transmembrane transport
F1C79_RS02610	COG0395	ABC-type sugar transport system, permease component
F1C79_RS02615	COG3842	ATPase activity
F1C79_RS02625	COG0676	glucose-6-phosphate 1-epimerase activity
F1C79_RS02645	COG1295	ribonuclease BN
F1C79_RS02655	COG0583	DNA-binding transcription factor activity
F1C79_RS02675	COG2205	protein histidine kinase activity
F1C79_RS02680	COG2197	response regulator
F1C79_RS02690	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
F1C79_RS02695	COG2249	NAD(P)H dehydrogenase (quinone) activity
F1C79_RS02705	COG3706	GGDEF domain
F1C79_RS02705	COG5001	Diguanylate cyclase
F1C79_RS02705	COG2203	Gaf domain
F1C79_RS02705	COG4251	negative regulation of phosphorylation
F1C79_RS02720	COG3257	ureidoglycine aminohydrolase activity
F1C79_RS02725	COG0583	DNA-binding transcription factor activity
F1C79_RS02750	COG1335	isochorismatase
F1C79_RS02765	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
F1C79_RS02775	COG0745	RESPONSE REGULATOR receiver
F1C79_RS02780	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
F1C79_RS02785	COG2205	protein histidine kinase activity
F1C79_RS02805	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
F1C79_RS02830	COG2951	lytic endotransglycosylase activity
F1C79_RS02850	COG4977	sequence-specific DNA binding
F1C79_RS02850	COG1917	Cupin 2, conserved barrel domain protein
F1C79_RS02885	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
F1C79_RS02890	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS02895	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS02925	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS02935	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
F1C79_RS02940	COG4413	Urea transporter
F1C79_RS02945	COG0469	pyruvate kinase activity
F1C79_RS02955	COG2084	Dehydrogenase
F1C79_RS02960	COG3622	Belongs to the hyi family
F1C79_RS02965	COG3960	tartronate-semialdehyde synthase activity
F1C79_RS02975	COG1309	transcriptional regulator
F1C79_RS03010	COG2116	formate transmembrane transporter activity
F1C79_RS03015	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS03045	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
F1C79_RS03080	COG0072	phenylalanine-tRNA ligase activity
F1C79_RS03200	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
F1C79_RS03250	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
F1C79_RS03255	COG0732	type I restriction modification DNA specificity domain
F1C79_RS03275	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
F1C79_RS03290	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
F1C79_RS03350	COG0784	Response regulator, receiver
F1C79_RS03350	COG2205	protein histidine kinase activity
F1C79_RS03350	COG5002	protein histidine kinase activity
F1C79_RS03380	COG1022	Amp-dependent synthetase and ligase
F1C79_RS03395	COG1280	lysine exporter protein (LysE YggA)
F1C79_RS03415	COG0628	permease
F1C79_RS03420	COG2807	transmembrane transport
F1C79_RS03425	COG2186	Transcriptional regulator
F1C79_RS03440	COG2205	protein histidine kinase activity
F1C79_RS03475	COG2205	protein histidine kinase activity
F1C79_RS03480	COG0745	RESPONSE REGULATOR receiver
F1C79_RS03510	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
F1C79_RS03530	COG2130	NADP-dependent
F1C79_RS03535	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS03550	COG3135	benzoate transporter
F1C79_RS03565	COG1846	Transcriptional regulator
F1C79_RS03570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS03575	COG0625	glutathione transferase activity
F1C79_RS03630	COG1073	alpha beta
F1C79_RS03635	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
F1C79_RS03675	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
F1C79_RS03700	COG0730	response to heat
F1C79_RS03720	COG0300	oxidoreductase activity
F1C79_RS03745	COG1177	transmembrane transport
F1C79_RS03750	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS03755	COG3842	ATPase activity
F1C79_RS03765	COG2308	Evidence 4 Homologs of previously reported genes of
F1C79_RS03775	COG1305	Transglutaminase-like
F1C79_RS03790	COG0183	Belongs to the thiolase family
F1C79_RS03795	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS03795	COG1024	Enoyl-CoA hydratase
F1C79_RS03805	COG0518	GMP synthase (glutamine-hydrolyzing) activity
F1C79_RS03805	COG0519	Catalyzes the synthesis of GMP from XMP
F1C79_RS03810	COG0598	Magnesium transport protein CorA
F1C79_RS03855	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
F1C79_RS03900	COG2909	trisaccharide binding
F1C79_RS03935	COG0189	ligase activity
F1C79_RS03945	COG4067	protein conserved in archaea
F1C79_RS03945	COG0189	ligase activity
F1C79_RS03955	COG3064	Membrane
F1C79_RS03990	COG0668	transmembrane transport
F1C79_RS04010	COG0243	molybdopterin cofactor binding
F1C79_RS04015	COG2146	nitrite reductase [NAD(P)H] activity
F1C79_RS04020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
F1C79_RS04025	COG0515	serine threonine protein kinase
F1C79_RS04030	COG2223	nitrite transmembrane transporter activity
F1C79_RS04045	COG3707	response regulator
F1C79_RS04070	COG0589	response to stress
F1C79_RS04090	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
F1C79_RS04095	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
F1C79_RS04100	COG0215	cysteine-tRNA ligase activity
F1C79_RS04140	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
F1C79_RS04150	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
F1C79_RS04185	COG4172	Belongs to the ABC transporter superfamily
F1C79_RS04190	COG4239	(ABC) transporter, permease
F1C79_RS04195	COG4174	ABC transporter (Permease)
F1C79_RS04200	COG4166	transmembrane transport
F1C79_RS04205	COG4166	transmembrane transport
F1C79_RS04210	COG0741	lytic transglycosylase activity
F1C79_RS04210	COG1388	LysM domain
F1C79_RS04230	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
F1C79_RS04245	COG0531	amino acid
F1C79_RS04250	COG1024	Enoyl-CoA hydratase
F1C79_RS04260	COG2816	NAD+ diphosphatase activity
F1C79_RS04275	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS04295	COG0616	signal peptide processing
F1C79_RS04300	COG0604	alcohol dehydrogenase
F1C79_RS04340	COG0534	Mate efflux family protein
F1C79_RS04390	COG3813	Protein conserved in bacteria
F1C79_RS04395	COG4977	sequence-specific DNA binding
F1C79_RS04400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
F1C79_RS04430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
F1C79_RS04435	COG2866	Carboxypeptidase
F1C79_RS04485	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
F1C79_RS04490	COG0753	catalase activity
F1C79_RS04495	COG2010	Cytochrome c
F1C79_RS04515	COG0583	DNA-binding transcription factor activity
F1C79_RS04520	COG3485	protocatechuate 3,4-dioxygenase
F1C79_RS04525	COG3485	protocatechuate 3,4-dioxygenase
F1C79_RS04530	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
F1C79_RS04535	COG1414	Transcriptional regulator
F1C79_RS04610	COG4948	Mandelate Racemase Muconate Lactonizing
F1C79_RS04615	COG4829	muconolactone delta-isomerase
F1C79_RS04620	COG3485	protocatechuate 3,4-dioxygenase
F1C79_RS04625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
F1C79_RS04630	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
F1C79_RS04635	COG0183	Belongs to the thiolase family
F1C79_RS04645	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
F1C79_RS04650	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS04655	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
F1C79_RS04660	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS04665	COG2610	gluconate transmembrane transporter activity
F1C79_RS04675	COG2204	response regulator
F1C79_RS04695	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
F1C79_RS04700	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS04710	COG3284	Transcriptional regulator
F1C79_RS04715	COG1132	(ABC) transporter
F1C79_RS04735	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS04740	COG0583	DNA-binding transcription factor activity
F1C79_RS04750	COG2233	PERMEase
F1C79_RS04755	COG0583	DNA-binding transcription factor activity
F1C79_RS04785	COG0251	oxidation-reduction process
F1C79_RS04790	COG0583	DNA-binding transcription factor activity
F1C79_RS04810	COG0154	amidase activity
F1C79_RS04835	COG0477	Major facilitator Superfamily
F1C79_RS04865	COG4221	oxidoreductase activity
F1C79_RS04885	COG1686	Belongs to the peptidase S11 family
F1C79_RS04890	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS04900	COG0840	transmembrane signaling receptor activity
F1C79_RS04905	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
F1C79_RS04915	COG0183	Belongs to the thiolase family
F1C79_RS04940	COG0861	Integral membrane protein TerC family
F1C79_RS04960	COG0784	Response regulator, receiver
F1C79_RS04980	COG0729	surface antigen
F1C79_RS05005	COG0667	Aldo Keto reductase
F1C79_RS05035	COG2011	ABC-type metal ion transport system permease component
F1C79_RS05045	COG1464	Belongs to the NlpA lipoprotein family
F1C79_RS05070	COG2011	ABC-type metal ion transport system permease component
F1C79_RS05085	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
F1C79_RS05095	COG3795	YCII-related domain
F1C79_RS05120	COG3123	guanosine phosphorylase activity
F1C79_RS05130	COG2084	Dehydrogenase
F1C79_RS05140	COG1501	Belongs to the glycosyl hydrolase 31 family
F1C79_RS05160	COG2009	succinate dehydrogenase
F1C79_RS05165	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
F1C79_RS05170	COG1053	succinate dehydrogenase
F1C79_RS05175	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
F1C79_RS05220	COG1234	tRNA 3'-trailer cleavage
F1C79_RS05225	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS05245	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS05275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS05330	COG1529	Aldehyde oxidase and xanthine dehydrogenase
F1C79_RS05330	COG2010	Cytochrome c
F1C79_RS05340	COG2080	2 iron, 2 sulfur cluster binding
F1C79_RS05350	COG1741	Belongs to the pirin family
F1C79_RS05375	COG1522	sequence-specific DNA binding
F1C79_RS05405	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
F1C79_RS05410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
F1C79_RS05420	COG2832	Protein of unknown function (DUF454)
F1C79_RS05440	COG1595	DNA-templated transcription, initiation
F1C79_RS05455	COG0583	DNA-binding transcription factor activity
F1C79_RS05525	COG3829	transcription factor binding
F1C79_RS05565	COG0583	DNA-binding transcription factor activity
F1C79_RS05575	COG2081	HI0933 family
F1C79_RS05580	COG1944	ATP diphosphatase activity
F1C79_RS05605	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS05610	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
F1C79_RS05615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
F1C79_RS05630	COG0791	NLP P60 protein
F1C79_RS05635	COG0791	NLP P60 protein
F1C79_RS05650	COG2329	Antibiotic biosynthesis monooxygenase
F1C79_RS05655	COG0504	CTP synthase activity
F1C79_RS05660	COG0583	DNA-binding transcription factor activity
F1C79_RS05680	COG0583	DNA-binding transcription factor activity
F1C79_RS05685	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS05710	COG0590	tRNA wobble adenosine to inosine editing
F1C79_RS05715	COG2807	transmembrane transport
F1C79_RS05790	COG1595	DNA-templated transcription, initiation
F1C79_RS05805	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS05820	COG0154	amidase activity
F1C79_RS05835	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS05855	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
F1C79_RS05870	COG0019	diaminopimelate decarboxylase activity
F1C79_RS05875	COG0583	DNA-binding transcription factor activity
F1C79_RS05885	COG0587	DNA-directed DNA polymerase activity
F1C79_RS05920	COG4319	ketosteroid isomerase
F1C79_RS05940	COG0842	Transport permease protein
F1C79_RS05945	COG0842	Transport permease protein
F1C79_RS05950	COG1131	(ABC) transporter
F1C79_RS05975	COG1566	PFAM secretion protein HlyD family protein
F1C79_RS05995	COG3246	L-lysine catabolic process to acetate
F1C79_RS06020	COG2207	Transcriptional regulator
F1C79_RS06040	COG4447	cellulose binding
F1C79_RS06050	COG0583	DNA-binding transcription factor activity
F1C79_RS06055	COG3842	ATPase activity
F1C79_RS06070	COG1177	transmembrane transport
F1C79_RS06075	COG0006	proline dipeptidase activity
F1C79_RS06095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS06105	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS06110	COG0531	amino acid
F1C79_RS06120	COG0402	S-adenosylhomocysteine deaminase activity
F1C79_RS06125	COG0583	DNA-binding transcription factor activity
F1C79_RS06130	COG0583	DNA-binding transcription factor activity
F1C79_RS06145	COG0477	Major facilitator Superfamily
F1C79_RS06170	COG1942	4-Oxalocrotonate Tautomerase
F1C79_RS06175	COG2207	Transcriptional regulator
F1C79_RS06180	COG1064	alcohol dehydrogenase
F1C79_RS06235	COG1595	DNA-templated transcription, initiation
F1C79_RS06240	COG3712	iron ion homeostasis
F1C79_RS06260	COG2267	carboxylic ester hydrolase activity
F1C79_RS06265	COG2072	flavoprotein involved in K transport
F1C79_RS06280	COG2837	iron assimilation
F1C79_RS06285	COG0583	DNA-binding transcription factor activity
F1C79_RS06290	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS06300	COG4106	trans-aconitate 2-methyltransferase activity
F1C79_RS06375	COG0583	DNA-binding transcription factor activity
F1C79_RS06405	COG2267	carboxylic ester hydrolase activity
F1C79_RS06410	COG0384	phenazine biosynthesis protein PhzF
F1C79_RS06445	COG0583	DNA-binding transcription factor activity
F1C79_RS06455	COG1120	ATPase activity
F1C79_RS06460	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
F1C79_RS06485	COG4774	siderophore transport
F1C79_RS06490	COG2223	nitrite transmembrane transporter activity
F1C79_RS06500	COG2365	Tyrosine phosphatase family
F1C79_RS06520	COG3791	Glutathione-dependent formaldehyde-activating
F1C79_RS06530	COG1454	alcohol dehydrogenase
F1C79_RS06535	COG0531	amino acid
F1C79_RS06595	COG1959	2 iron, 2 sulfur cluster binding
F1C79_RS06615	COG1285	pathogenesis
F1C79_RS06640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS06665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS06670	COG1126	abc transporter atp-binding protein
F1C79_RS06675	COG0765	amino acid transport
F1C79_RS06680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS06690	COG0784	Response regulator, receiver
F1C79_RS06690	COG2205	protein histidine kinase activity
F1C79_RS06690	COG5002	protein histidine kinase activity
F1C79_RS06755	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS06770	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS06775	COG0477	Major facilitator Superfamily
F1C79_RS06790	COG0697	spore germination
F1C79_RS06795	COG2207	Transcriptional regulator
F1C79_RS06800	COG1191	sigma factor activity
F1C79_RS06845	COG0657	acetylesterase activity
F1C79_RS06850	COG3224	Antibiotic biosynthesis monooxygenase
F1C79_RS06860	COG1574	metal-dependent hydrolase with the TIM-barrel fold
F1C79_RS06865	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
F1C79_RS06870	COG0584	glycerophosphoryl diester phosphodiesterase
F1C79_RS06890	COG3811	Belongs to the UPF0386 family
F1C79_RS06895	COG0583	DNA-binding transcription factor activity
F1C79_RS06900	COG2814	Major facilitator Superfamily
F1C79_RS06905	COG0583	DNA-binding transcription factor activity
F1C79_RS06975	COG2188	Transcriptional regulator
F1C79_RS06990	COG4771	TonB-dependent receptor
F1C79_RS07000	COG4991	sh3 domain protein
F1C79_RS07105	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
F1C79_RS07105	COG4797	methyltransferase
F1C79_RS07125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS07135	COG0659	secondary active sulfate transmembrane transporter activity
F1C79_RS07145	COG2197	response regulator
F1C79_RS07175	COG2197	response regulator
F1C79_RS07185	COG2814	Major facilitator Superfamily
F1C79_RS07190	COG1942	4-Oxalocrotonate Tautomerase
F1C79_RS07225	COG1959	2 iron, 2 sulfur cluster binding
F1C79_RS07245	COG0583	DNA-binding transcription factor activity
F1C79_RS07250	COG0697	spore germination
F1C79_RS07275	COG0477	Major facilitator Superfamily
F1C79_RS07280	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
F1C79_RS07285	COG0667	Aldo Keto reductase
F1C79_RS07295	COG0667	Aldo Keto reductase
F1C79_RS07300	COG1064	alcohol dehydrogenase
F1C79_RS07310	COG3321	synthase
F1C79_RS07310	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS07310	COG0604	alcohol dehydrogenase
F1C79_RS07325	COG2199	diguanylate cyclase activity
F1C79_RS07325	COG2200	EAL domain
F1C79_RS07325	COG2203	Gaf domain
F1C79_RS07330	COG1877	trehalose-phosphatase activity
F1C79_RS07340	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
F1C79_RS07350	COG2814	Major facilitator Superfamily
F1C79_RS07355	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS07365	COG1024	Enoyl-CoA hydratase
F1C79_RS07370	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS07375	COG0183	Belongs to the thiolase family
F1C79_RS07410	COG0655	NAD(P)H dehydrogenase (quinone) activity
F1C79_RS07415	COG0789	Transcriptional regulator
F1C79_RS07420	COG0583	DNA-binding transcription factor activity
F1C79_RS07440	COG2957	Belongs to the agmatine deiminase family
F1C79_RS07465	COG3706	GGDEF domain
F1C79_RS07465	COG4251	negative regulation of phosphorylation
F1C79_RS07465	COG5001	Diguanylate cyclase
F1C79_RS07465	COG2203	Gaf domain
F1C79_RS07470	COG5001	Diguanylate cyclase
F1C79_RS07470	COG4251	negative regulation of phosphorylation
F1C79_RS07470	COG3706	GGDEF domain
F1C79_RS07470	COG2203	Gaf domain
F1C79_RS07475	COG2808	Putative FMN-binding domain
F1C79_RS07495	COG0826	peptidase U32
F1C79_RS07520	COG1595	DNA-templated transcription, initiation
F1C79_RS07525	COG0753	catalase activity
F1C79_RS07530	COG3038	cytochrome b561
F1C79_RS07570	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
F1C79_RS07575	COG0581	inorganic phosphate transmembrane transporter activity
F1C79_RS07585	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
F1C79_RS07600	COG0251	oxidation-reduction process
F1C79_RS07615	COG3265	gluconokinase activity
F1C79_RS07620	COG1609	Transcriptional regulator
F1C79_RS07635	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
F1C79_RS07650	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
F1C79_RS07660	COG0402	S-adenosylhomocysteine deaminase activity
F1C79_RS07665	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS07705	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS07710	COG3284	Transcriptional regulator
F1C79_RS07720	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
F1C79_RS07725	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
F1C79_RS07750	COG5002	protein histidine kinase activity
F1C79_RS07760	COG0784	Response regulator, receiver
F1C79_RS07760	COG4191	Histidine kinase
F1C79_RS07765	COG2198	Histidine kinase
F1C79_RS07765	COG2205	protein histidine kinase activity
F1C79_RS07765	COG0784	Response regulator, receiver
F1C79_RS07770	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
F1C79_RS07780	COG3437	response regulator, receiver
F1C79_RS07780	COG3850	Histidine kinase
F1C79_RS07780	COG4999	Histidine kinase
F1C79_RS07780	COG2205	protein histidine kinase activity
F1C79_RS07815	COG0586	Pfam SNARE associated Golgi protein
F1C79_RS07820	COG2837	iron assimilation
F1C79_RS07835	COG1082	Xylose isomerase domain protein TIM barrel
F1C79_RS07835	COG3185	4-Hydroxyphenylpyruvate dioxygenase
F1C79_RS07840	COG1309	transcriptional regulator
F1C79_RS07845	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
F1C79_RS07850	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
F1C79_RS07905	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
F1C79_RS07910	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
F1C79_RS07920	COG2030	dehydratase
F1C79_RS07920	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS07925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
F1C79_RS07930	COG2151	metal-sulfur cluster biosynthetic enzyme
F1C79_RS07935	COG3396	Phenylacetate-CoA oxygenase
F1C79_RS07940	COG3460	Phenylacetate-CoA oxygenase
F1C79_RS07945	COG3396	Phenylacetate-CoA oxygenase
F1C79_RS07950	COG5507	3-demethylubiquinone-9 3-methyltransferase
F1C79_RS07960	COG0183	Belongs to the thiolase family
F1C79_RS07965	COG2050	protein possibly involved in aromatic compounds catabolism
F1C79_RS07970	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS07975	COG1024	Enoyl-CoA hydratase
F1C79_RS07980	COG1024	Enoyl-CoA hydratase
F1C79_RS07990	COG3327	negative regulation of DNA-templated transcription, initiation
F1C79_RS07995	COG2207	Transcriptional regulator
F1C79_RS08000	COG3474	cytochrome
F1C79_RS08005	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS08020	COG1414	Transcriptional regulator
F1C79_RS08035	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
F1C79_RS08045	COG2031	fatty acid transporter
F1C79_RS08080	COG2205	protein histidine kinase activity
F1C79_RS08080	COG0784	Response regulator, receiver
F1C79_RS08105	COG1131	(ABC) transporter
F1C79_RS08170	COG1278	Cold shock
F1C79_RS08175	COG0583	DNA-binding transcription factor activity
F1C79_RS08190	COG0488	(ABC) transporter
F1C79_RS08225	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
F1C79_RS08250	COG1115	amino acid carrier protein
F1C79_RS08255	COG0252	asparaginase activity
F1C79_RS08260	COG4566	intracellular signal transduction
F1C79_RS08270	COG3485	protocatechuate 3,4-dioxygenase
F1C79_RS08285	COG4774	siderophore transport
F1C79_RS08315	COG4114	ferric iron reductase
F1C79_RS08320	COG1120	ATPase activity
F1C79_RS08325	COG0210	DNA helicase
F1C79_RS08340	COG0583	DNA-binding transcription factor activity
F1C79_RS08350	COG2249	NAD(P)H dehydrogenase (quinone) activity
F1C79_RS08355	COG0583	DNA-binding transcription factor activity
F1C79_RS08400	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
F1C79_RS08405	COG0667	Aldo Keto reductase
F1C79_RS08410	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
F1C79_RS08420	COG1609	Transcriptional regulator
F1C79_RS08430	COG5001	Diguanylate cyclase
F1C79_RS08440	COG3729	General stress protein
F1C79_RS08470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
F1C79_RS08475	COG1045	serine acetyltransferase
F1C79_RS08480	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
F1C79_RS08540	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS08550	COG0058	SHG alpha-glucan phosphorylase activity
F1C79_RS08555	COG1285	pathogenesis
F1C79_RS08585	COG0392	lysyltransferase activity
F1C79_RS08590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
F1C79_RS08595	COG3568	Endonuclease Exonuclease Phosphatase
F1C79_RS08620	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
F1C79_RS08665	COG0028	Belongs to the TPP enzyme family
F1C79_RS08680	COG0517	IMP dehydrogenase activity
F1C79_RS08685	COG0693	protein deglycase activity
F1C79_RS08710	COG0668	transmembrane transport
F1C79_RS08730	COG2801	Transposase and inactivated derivatives
F1C79_RS08745	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
F1C79_RS08750	COG5295	Hep Hag repeat protein
F1C79_RS08770	COG2205	protein histidine kinase activity
F1C79_RS08770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS08775	COG2197	response regulator
F1C79_RS08805	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS08810	COG1024	Enoyl-CoA hydratase
F1C79_RS08810	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS08815	COG0183	Belongs to the thiolase family
F1C79_RS08820	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS08825	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS08845	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS08850	COG0183	Belongs to the thiolase family
F1C79_RS08855	COG1024	Enoyl-CoA hydratase
F1C79_RS08870	COG1024	Enoyl-CoA hydratase
F1C79_RS08880	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS08885	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS08900	COG1064	alcohol dehydrogenase
F1C79_RS08920	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS08935	COG4447	cellulose binding
F1C79_RS08955	COG2909	trisaccharide binding
F1C79_RS09015	COG0668	transmembrane transport
F1C79_RS09020	COG4944	Protein of unknown function (DUF1109)
F1C79_RS09025	COG1595	DNA-templated transcription, initiation
F1C79_RS09035	COG3220	belongs to the UPF0276 family
F1C79_RS09060	COG2197	response regulator
F1C79_RS09095	COG2995	paraquat-inducible protein a
F1C79_RS09105	COG2985	domain, Protein
F1C79_RS09160	COG0531	amino acid
F1C79_RS09180	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS09190	COG0183	Belongs to the thiolase family
F1C79_RS09215	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS09230	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS09250	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS09260	COG1804	L-carnitine dehydratase bile acid-inducible protein F
F1C79_RS09265	COG2909	trisaccharide binding
F1C79_RS09270	COG2301	Belongs to the HpcH HpaI aldolase family
F1C79_RS09280	COG2079	MmgE PrpD family protein
F1C79_RS09285	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS09290	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
F1C79_RS09300	COG2197	response regulator
F1C79_RS09315	COG3119	arylsulfatase activity
F1C79_RS09320	COG0714	Associated with various cellular activities
F1C79_RS09350	COG0583	DNA-binding transcription factor activity
F1C79_RS09360	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS09365	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS09370	COG0477	Major facilitator Superfamily
F1C79_RS09395	COG2207	Transcriptional regulator
F1C79_RS09400	COG2207	Transcriptional regulator
F1C79_RS09420	COG4943	cyclic-guanylate-specific phosphodiesterase activity
F1C79_RS09425	COG3468	outer membrane autotransporter barrel domain protein
F1C79_RS09430	COG2197	response regulator
F1C79_RS09435	COG2271	Major facilitator Superfamily
F1C79_RS09445	COG2508	Transcriptional regulator
F1C79_RS09455	COG0579	oxidoreductase
F1C79_RS09465	COG4772	TonB-dependent receptor
F1C79_RS09490	COG2814	Major facilitator Superfamily
F1C79_RS09495	COG0656	L-ascorbic acid biosynthetic process
F1C79_RS09500	COG1063	alcohol dehydrogenase
F1C79_RS09505	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS09510	COG0583	DNA-binding transcription factor activity
F1C79_RS09515	COG1289	transmembrane transporter activity
F1C79_RS09560	COG0235	Class ii aldolase
F1C79_RS09565	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS09570	COG1595	DNA-templated transcription, initiation
F1C79_RS09590	COG0583	DNA-binding transcription factor activity
F1C79_RS09605	COG3781	membrane
F1C79_RS09610	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
F1C79_RS09615	COG1804	L-carnitine dehydratase bile acid-inducible protein F
F1C79_RS09640	COG2356	endonuclease I
F1C79_RS09650	COG1522	sequence-specific DNA binding
F1C79_RS09680	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
F1C79_RS09750	COG2168	tRNA wobble position uridine thiolation
F1C79_RS09755	COG2920	part of a sulfur-relay system
F1C79_RS09760	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
F1C79_RS09765	COG0435	Glutathione S-transferase
F1C79_RS09785	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
F1C79_RS09800	COG0492	ferredoxin-NADP+ reductase activity
F1C79_RS09815	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
F1C79_RS09820	COG0542	response to heat
F1C79_RS09825	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
F1C79_RS09830	COG1278	Cold shock
F1C79_RS09850	COG0482	sulfurtransferase activity
F1C79_RS09865	COG2850	peptidyl-arginine hydroxylation
F1C79_RS09870	COG2153	protein acetylation
F1C79_RS09945	COG0713	ATP synthesis coupled electron transport
F1C79_RS09965	COG0628	permease
F1C79_RS09970	COG2056	Na+-H+ antiporter family
F1C79_RS09975	COG0840	transmembrane signaling receptor activity
F1C79_RS10025	COG3604	Transcriptional regulator
F1C79_RS10030	COG0720	synthase
F1C79_RS10035	COG0417	DNA replication proofreading
F1C79_RS10055	COG0385	Bile acid
F1C79_RS10085	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS10090	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS10115	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS10125	COG0506	proline dehydrogenase activity
F1C79_RS10125	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
F1C79_RS10125	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
F1C79_RS10130	COG1733	regulation of RNA biosynthetic process
F1C79_RS10145	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS10185	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS10205	COG1335	isochorismatase
F1C79_RS10255	COG2271	Major facilitator Superfamily
F1C79_RS10270	COG2186	Transcriptional regulator
F1C79_RS10280	COG3278	Belongs to the heme-copper respiratory oxidase family
F1C79_RS10290	COG0517	IMP dehydrogenase activity
F1C79_RS10325	COG0579	oxidoreductase
F1C79_RS10330	COG2207	Transcriptional regulator
F1C79_RS10345	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
F1C79_RS10380	COG0765	amino acid transport
F1C79_RS10400	COG0667	Aldo Keto reductase
F1C79_RS10405	COG1595	DNA-templated transcription, initiation
F1C79_RS10410	COG3712	iron ion homeostasis
F1C79_RS10440	COG0583	DNA-binding transcription factor activity
F1C79_RS10445	COG2233	PERMEase
F1C79_RS10460	COG1119	ATPase activity
F1C79_RS10480	COG2801	Transposase and inactivated derivatives
F1C79_RS10490	COG4983	Phage plasmid primase, P4 family domain protein
F1C79_RS10520	COG5377	YqaJ viral recombinase family
F1C79_RS10565	COG0235	Class ii aldolase
F1C79_RS10605	COG0642	Histidine kinase
F1C79_RS10625	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
F1C79_RS10645	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS10655	COG0179	Fumarylacetoacetate (FAA) hydrolase
F1C79_RS10660	COG1802	Transcriptional regulator
F1C79_RS10665	COG0583	DNA-binding transcription factor activity
F1C79_RS10690	COG0179	Fumarylacetoacetate (FAA) hydrolase
F1C79_RS10700	COG0508	dehydrogenase complex catalyzes the overall conversion of
F1C79_RS10710	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
F1C79_RS10730	COG0583	DNA-binding transcription factor activity
F1C79_RS10760	COG4566	intracellular signal transduction
F1C79_RS10765	COG4191	Histidine kinase
F1C79_RS10780	COG4206	TonB-dependent receptor
F1C79_RS10840	COG1473	amidohydrolase
F1C79_RS10845	COG0583	DNA-binding transcription factor activity
F1C79_RS10860	COG2843	Capsule synthesis protein
F1C79_RS10865	COG0745	RESPONSE REGULATOR receiver
F1C79_RS10905	COG3842	ATPase activity
F1C79_RS10910	COG1177	transmembrane transport
F1C79_RS10915	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS10940	COG2207	Transcriptional regulator
F1C79_RS10995	COG0596	Alpha beta hydrolase
F1C79_RS11000	COG0596	Alpha beta hydrolase
F1C79_RS11005	COG4191	Histidine kinase
F1C79_RS11015	COG4566	intracellular signal transduction
F1C79_RS11025	COG1764	response to oxidative stress
F1C79_RS11055	COG0625	glutathione transferase activity
F1C79_RS11070	COG1473	amidohydrolase
F1C79_RS11080	COG2423	ornithine cyclodeaminase activity
F1C79_RS11090	COG0531	amino acid
F1C79_RS11100	COG0174	glutamine synthetase
F1C79_RS11115	COG0110	maltose O-acetyltransferase activity
F1C79_RS11125	COG0477	Major facilitator Superfamily
F1C79_RS11140	COG2207	Transcriptional regulator
F1C79_RS11165	COG5295	Hep Hag repeat protein
F1C79_RS11165	COG5295	Hep Hag repeat protein
F1C79_RS11175	COG2197	response regulator
F1C79_RS11180	COG0583	DNA-binding transcription factor activity
F1C79_RS11185	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS11200	COG0635	Involved in the biosynthesis of porphyrin-containing compound
F1C79_RS11210	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
F1C79_RS11220	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
F1C79_RS11225	COG2181	nitrate reductase activity
F1C79_RS11230	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
F1C79_RS11240	COG5001	Diguanylate cyclase
F1C79_RS11240	COG3300	MHYT domain
F1C79_RS11250	COG0583	DNA-binding transcription factor activity
F1C79_RS11255	COG2067	long-chain fatty acid transport protein
F1C79_RS11265	COG2015	COG2015, Alkyl sulfatase and related hydrolases
F1C79_RS11280	COG3712	iron ion homeostasis
F1C79_RS11290	COG5001	Diguanylate cyclase
F1C79_RS11290	COG2203	Gaf domain
F1C79_RS11290	COG3706	GGDEF domain
F1C79_RS11290	COG4251	negative regulation of phosphorylation
F1C79_RS11325	COG3179	chitinase
F1C79_RS11380	COG0531	amino acid
F1C79_RS11400	COG1172	Belongs to the binding-protein-dependent transport system permease family
F1C79_RS11405	COG1129	ABC transporter
F1C79_RS11410	COG0625	glutathione transferase activity
F1C79_RS11415	COG1335	isochorismatase
F1C79_RS11480	COG3383	formate dehydrogenase (NAD+) activity
F1C79_RS11490	COG0768	penicillin binding
F1C79_RS11495	COG3193	protein, possibly involved in utilization of glycolate and propanediol
F1C79_RS11500	COG0697	spore germination
F1C79_RS11540	COG1024	Enoyl-CoA hydratase
F1C79_RS11555	COG0583	DNA-binding transcription factor activity
F1C79_RS11560	COG0531	amino acid
F1C79_RS11570	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS11585	COG4566	intracellular signal transduction
F1C79_RS11600	COG4566	intracellular signal transduction
F1C79_RS11605	COG1252	NADH dehydrogenase
F1C79_RS11610	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
F1C79_RS11615	COG2226	methyltransferase
F1C79_RS11640	COG3712	iron ion homeostasis
F1C79_RS11645	COG1595	DNA-templated transcription, initiation
F1C79_RS11655	COG0745	RESPONSE REGULATOR receiver
F1C79_RS11660	COG2205	protein histidine kinase activity
F1C79_RS11695	COG3384	dioxygenase
F1C79_RS11705	COG0583	DNA-binding transcription factor activity
F1C79_RS11710	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
F1C79_RS11715	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
F1C79_RS11720	COG2828	Protein conserved in bacteria
F1C79_RS11730	COG3712	iron ion homeostasis
F1C79_RS11735	COG1595	DNA-templated transcription, initiation
F1C79_RS11740	COG1595	DNA-templated transcription, initiation
F1C79_RS11765	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS11775	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS11780	COG2197	response regulator
F1C79_RS11810	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS11825	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS11835	COG1024	Enoyl-CoA hydratase
F1C79_RS11840	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS11845	COG0183	Belongs to the thiolase family
F1C79_RS11855	COG0183	Belongs to the thiolase family
F1C79_RS11860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
F1C79_RS11870	COG1024	Enoyl-CoA hydratase
F1C79_RS11875	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS11880	COG0183	Belongs to the thiolase family
F1C79_RS11885	COG2030	dehydratase
F1C79_RS11920	COG3119	arylsulfatase activity
F1C79_RS11955	COG0714	Associated with various cellular activities
F1C79_RS11970	COG0431	NADPH-dependent FMN reductase
F1C79_RS12015	COG1595	DNA-templated transcription, initiation
F1C79_RS12020	COG3712	iron ion homeostasis
F1C79_RS12060	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
F1C79_RS12065	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
F1C79_RS12080	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS12125	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS12155	COG1228	amidohydrolase
F1C79_RS12165	COG0583	DNA-binding transcription factor activity
F1C79_RS12170	COG1368	sulfuric ester hydrolase activity
F1C79_RS12195	COG0583	DNA-binding transcription factor activity
F1C79_RS12200	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS12210	COG0583	DNA-binding transcription factor activity
F1C79_RS12225	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
F1C79_RS12230	COG1064	alcohol dehydrogenase
F1C79_RS12260	COG0583	DNA-binding transcription factor activity
F1C79_RS12265	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
F1C79_RS12270	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
F1C79_RS12290	COG0583	DNA-binding transcription factor activity
F1C79_RS12320	COG1335	isochorismatase
F1C79_RS12325	COG1335	isochorismatase
F1C79_RS12335	COG0583	DNA-binding transcription factor activity
F1C79_RS12340	COG0494	nUDIX hydrolase
F1C79_RS12350	COG0406	alpha-ribazole phosphatase activity
F1C79_RS12355	COG5001	Diguanylate cyclase
F1C79_RS12355	COG4251	negative regulation of phosphorylation
F1C79_RS12355	COG2203	Gaf domain
F1C79_RS12355	COG3706	GGDEF domain
F1C79_RS12390	COG0640	Transcriptional regulator
F1C79_RS12420	COG0174	glutamine synthetase
F1C79_RS12425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS12430	COG0583	DNA-binding transcription factor activity
F1C79_RS12435	COG3842	ATPase activity
F1C79_RS12450	COG1177	transmembrane transport
F1C79_RS12495	COG3278	Belongs to the heme-copper respiratory oxidase family
F1C79_RS12515	COG3278	Belongs to the heme-copper respiratory oxidase family
F1C79_RS12530	COG2010	Cytochrome c
F1C79_RS12570	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
F1C79_RS12630	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
F1C79_RS12645	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
F1C79_RS12750	COG2252	PERMEase
F1C79_RS12755	COG2197	response regulator
F1C79_RS12790	COG2233	PERMEase
F1C79_RS12795	COG0840	transmembrane signaling receptor activity
F1C79_RS12820	COG0745	RESPONSE REGULATOR receiver
F1C79_RS12825	COG2853	Lipoprotein
F1C79_RS12860	COG2132	Multicopper oxidase
F1C79_RS12880	COG0842	Transport permease protein
F1C79_RS12885	COG1131	(ABC) transporter
F1C79_RS12890	COG0625	glutathione transferase activity
F1C79_RS12955	COG1956	GAF domain-containing protein
F1C79_RS12970	COG1846	Transcriptional regulator
F1C79_RS12975	COG0386	Belongs to the glutathione peroxidase family
F1C79_RS12985	COG0436	Aminotransferase
F1C79_RS13010	COG3384	dioxygenase
F1C79_RS13020	COG1024	Enoyl-CoA hydratase
F1C79_RS13040	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
F1C79_RS13045	COG0501	Belongs to the peptidase M48B family
F1C79_RS13050	COG3214	Protein conserved in bacteria
F1C79_RS13065	COG0583	DNA-binding transcription factor activity
F1C79_RS13070	COG0730	response to heat
F1C79_RS13080	COG1846	Transcriptional regulator
F1C79_RS13085	COG1764	response to oxidative stress
F1C79_RS13125	COG4181	ATPase activity
F1C79_RS13130	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
F1C79_RS13145	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
F1C79_RS13150	COG0583	DNA-binding transcription factor activity
F1C79_RS13155	COG2855	membrane
F1C79_RS13160	COG2259	Doxx family
F1C79_RS13165	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
F1C79_RS13215	COG0714	Associated with various cellular activities
F1C79_RS13220	COG0583	DNA-binding transcription factor activity
F1C79_RS13240	COG5002	protein histidine kinase activity
F1C79_RS13240	COG5002	protein histidine kinase activity
F1C79_RS13250	COG4303	Ethanolamine ammonia lyase large subunit
F1C79_RS13255	COG4302	ethanolamine ammonia-lyase activity
F1C79_RS13270	COG1309	transcriptional regulator
F1C79_RS13285	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
F1C79_RS13290	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS13295	COG1024	Enoyl-CoA hydratase
F1C79_RS13305	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS13310	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS13330	COG1595	DNA-templated transcription, initiation
F1C79_RS13335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS13400	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
F1C79_RS13415	COG0084	hydrolase, TatD family'
F1C79_RS13440	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
F1C79_RS13450	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
F1C79_RS13475	COG0333	Belongs to the bacterial ribosomal protein bL32 family
F1C79_RS13480	COG1399	metal-binding, possibly nucleic acid-binding protein
F1C79_RS13485	COG0424	maF-like protein
F1C79_RS13490	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
F1C79_RS13490	COG0616	signal peptide processing
F1C79_RS13495	COG0546	phosphoglycolate phosphatase activity
F1C79_RS13510	COG1530	ribonuclease E activity
F1C79_RS13520	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
F1C79_RS13530	COG2835	tetraacyldisaccharide 4'-kinase activity
F1C79_RS13540	COG0848	biopolymer transport protein
F1C79_RS13545	COG0811	peptide transport
F1C79_RS13550	COG2333	competence protein COMEC
F1C79_RS13550	COG0658	competence protein
F1C79_RS13570	COG4591	ABC-type transport system involved in lipoprotein release permease component
F1C79_RS13585	COG0584	glycerophosphoryl diester phosphodiesterase
F1C79_RS13595	COG1477	protein flavinylation
F1C79_RS13600	COG1113	amino acid transport
F1C79_RS13610	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
F1C79_RS13630	COG1376	ErfK ybiS ycfS ynhG family protein
F1C79_RS13690	COG0589	response to stress
F1C79_RS13705	COG0741	lytic transglycosylase activity
F1C79_RS13720	COG0835	chemotaxis
F1C79_RS13720	COG0784	Response regulator, receiver
F1C79_RS13730	COG1070	Carbohydrate kinase
F1C79_RS13750	COG0303	'Molybdopterin
F1C79_RS13775	COG2084	Dehydrogenase
F1C79_RS13785	COG1309	transcriptional regulator
F1C79_RS13805	COG0004	ammonium transporteR
F1C79_RS13825	COG4943	cyclic-guanylate-specific phosphodiesterase activity
F1C79_RS13835	COG2205	protein histidine kinase activity
F1C79_RS13835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS13840	COG2197	response regulator
F1C79_RS13845	COG0745	RESPONSE REGULATOR receiver
F1C79_RS13850	COG3171	Protein conserved in bacteria
F1C79_RS13855	COG2027	D-alanyl-D-alanine carboxypeptidase
F1C79_RS13870	COG3130	regulation of translation
F1C79_RS13920	COG0714	Associated with various cellular activities
F1C79_RS13985	COG0308	aminopeptidase N
F1C79_RS13995	COG3139	Protein of unknown function (DUF1315)
F1C79_RS14000	COG0705	Rhomboid family
F1C79_RS14005	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
F1C79_RS14030	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS14030	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS14075	COG1286	toxin biosynthetic process
F1C79_RS14080	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
F1C79_RS14085	COG0285	dihydrofolate synthase activity
F1C79_RS14095	COG0135	phosphoribosylanthranilate isomerase activity
F1C79_RS14130	COG2226	methyltransferase
F1C79_RS14135	COG0066	3-isopropylmalate dehydratase activity
F1C79_RS14165	COG0251	oxidation-reduction process
F1C79_RS14170	COG3949	Membrane
F1C79_RS14180	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS14195	COG0800	Aldolase
F1C79_RS14200	COG0596	Alpha beta hydrolase
F1C79_RS14235	COG0583	DNA-binding transcription factor activity
F1C79_RS14265	COG1555	photosystem II stabilization
F1C79_RS14285	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
F1C79_RS14300	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
F1C79_RS14325	COG1132	(ABC) transporter
F1C79_RS14350	COG0242	peptide deformylase activity
F1C79_RS14370	COG2996	Protein conserved in bacteria
F1C79_RS14375	COG1132	(ABC) transporter
F1C79_RS14385	COG0628	permease
F1C79_RS14400	COG1187	pseudouridine synthase activity
F1C79_RS14410	COG1024	Enoyl-CoA hydratase
F1C79_RS14485	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
F1C79_RS14500	COG0835	chemotaxis
F1C79_RS14510	COG1192	Involved in chromosome partitioning
F1C79_RS14520	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
F1C79_RS14530	COG2198	Histidine kinase
F1C79_RS14530	COG0643	Histidine kinase
F1C79_RS14530	COG0784	Response regulator, receiver
F1C79_RS14560	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
F1C79_RS14585	COG1987	bacterial-type flagellum assembly
F1C79_RS14640	COG2207	Transcriptional regulator
F1C79_RS14725	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
F1C79_RS14750	COG1256	bacterial-type flagellum assembly
F1C79_RS14775	COG4786	Flagellar basal body rod
F1C79_RS14805	COG0784	Response regulator, receiver
F1C79_RS14805	COG0835	chemotaxis
F1C79_RS14825	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
F1C79_RS14830	COG0477	Major facilitator Superfamily
F1C79_RS14840	COG0306	phosphate transporter
F1C79_RS14865	COG0583	DNA-binding transcription factor activity
F1C79_RS14870	COG3180	Ammonia monooxygenase
F1C79_RS14885	COG0477	Major facilitator Superfamily
F1C79_RS14895	COG4221	oxidoreductase activity
F1C79_RS14900	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS14900	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS14910	COG2186	Transcriptional regulator
F1C79_RS14915	COG0277	FAD linked oxidase domain protein
F1C79_RS14920	COG0277	FAD linked oxidase domain protein
F1C79_RS14925	COG0247	lactate metabolic process
F1C79_RS14930	COG3193	protein, possibly involved in utilization of glycolate and propanediol
F1C79_RS14935	COG1620	l-lactate permease
F1C79_RS14955	COG1113	amino acid transport
F1C79_RS14960	COG0625	glutathione transferase activity
F1C79_RS15015	COG1054	Belongs to the UPF0176 family
F1C79_RS15020	COG0271	Belongs to the BolA IbaG family
F1C79_RS15050	COG1629	transport
F1C79_RS15065	COG0697	spore germination
F1C79_RS15085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS15095	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
F1C79_RS15100	COG0431	NADPH-dependent FMN reductase
F1C79_RS15110	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS15115	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
F1C79_RS15120	COG0450	alkyl hydroperoxide reductase
F1C79_RS15130	COG0183	Belongs to the thiolase family
F1C79_RS15150	COG2274	protein secretion by the type I secretion system
F1C79_RS15155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS15175	COG0488	(ABC) transporter
F1C79_RS15210	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
F1C79_RS15220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
F1C79_RS15230	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
F1C79_RS15240	COG1196	nuclear chromosome segregation
F1C79_RS15240	COG3264	Mechanosensitive ion channel
F1C79_RS15245	COG4106	trans-aconitate 2-methyltransferase activity
F1C79_RS15275	COG0542	response to heat
F1C79_RS15290	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
F1C79_RS15305	COG0697	spore germination
F1C79_RS15310	COG1247	-acetyltransferase
F1C79_RS15325	COG0121	glutamine amidotransferase
F1C79_RS15340	COG1770	oligopeptidase
F1C79_RS15355	COG2983	Belongs to the UPF0260 family
F1C79_RS15365	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
F1C79_RS15425	COG3122	Protein conserved in bacteria
F1C79_RS15435	COG3956	TIGRFAM MazG family protein
F1C79_RS15440	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
F1C79_RS15465	COG0784	Response regulator, receiver
F1C79_RS15465	COG5002	protein histidine kinase activity
F1C79_RS15465	COG2205	protein histidine kinase activity
F1C79_RS15470	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
F1C79_RS15485	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
F1C79_RS15505	COG0392	lysyltransferase activity
F1C79_RS15505	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
F1C79_RS15515	COG3038	cytochrome b561
F1C79_RS15545	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
F1C79_RS15575	COG1752	Esterase of the alpha-beta hydrolase superfamily
F1C79_RS15585	COG1846	Transcriptional regulator
F1C79_RS15595	COG5001	Diguanylate cyclase
F1C79_RS15595	COG4251	negative regulation of phosphorylation
F1C79_RS15595	COG3706	GGDEF domain
F1C79_RS15595	COG2203	Gaf domain
F1C79_RS15605	COG0514	ATP-dependent DNA helicase (RecQ)
F1C79_RS15615	COG2832	Protein of unknown function (DUF454)
F1C79_RS15645	COG3300	MHYT domain
F1C79_RS15645	COG5001	Diguanylate cyclase
F1C79_RS15670	COG0367	asparagine synthase
F1C79_RS15680	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
F1C79_RS15680	COG0189	ligase activity
F1C79_RS15685	COG1363	Peptidase, m42
F1C79_RS15730	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
F1C79_RS15735	COG3162	membrane
F1C79_RS15740	COG0438	transferase activity, transferring glycosyl groups
F1C79_RS15740	COG4641	Protein conserved in bacteria
F1C79_RS15780	COG2853	Lipoprotein
F1C79_RS15795	COG1560	Kdo2-lipid A biosynthetic process
F1C79_RS15805	COG2894	cell division
F1C79_RS15820	COG1362	aminopeptidase activity
F1C79_RS15875	COG2200	EAL domain
F1C79_RS15875	COG2199	diguanylate cyclase activity
F1C79_RS15900	COG3339	Conserved Protein
F1C79_RS15905	COG0545	Peptidyl-prolyl cis-trans isomerase
F1C79_RS15925	COG0385	Bile acid
F1C79_RS15930	COG2076	Multidrug Resistance protein
F1C79_RS15960	COG2205	protein histidine kinase activity
F1C79_RS15970	COG0583	DNA-binding transcription factor activity
F1C79_RS16035	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS16055	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
F1C79_RS16085	COG0425	Belongs to the sulfur carrier protein TusA family
F1C79_RS16090	COG4783	chaperone-mediated protein folding
F1C79_RS16105	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
F1C79_RS16110	COG0602	queuosine metabolic process
F1C79_RS16120	COG2885	chlorophyll binding
F1C79_RS16145	COG0824	Thioesterase
F1C79_RS16180	COG0783	Belongs to the Dps family
F1C79_RS16190	COG2900	Belongs to the SlyX family
F1C79_RS16265	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
F1C79_RS16280	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
F1C79_RS16310	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS16335	COG1492	cobalamin metabolic process
F1C79_RS16350	COG0778	Nitroreductase
F1C79_RS16355	COG1797	cobyrinic acid a,c-diamide synthase activity
F1C79_RS16365	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
F1C79_RS16370	COG1127	ABC transporter
F1C79_RS16405	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS16410	COG0765	amino acid transport
F1C79_RS16415	COG1126	abc transporter atp-binding protein
F1C79_RS16435	COG0791	NLP P60 protein
F1C79_RS16440	COG0791	NLP P60 protein
F1C79_RS16475	COG4974	Belongs to the 'phage' integrase family
F1C79_RS16485	COG4128	Pfam Zonular occludens toxin
F1C79_RS16585	COG1804	L-carnitine dehydratase bile acid-inducible protein F
F1C79_RS16590	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS16615	COG1595	DNA-templated transcription, initiation
F1C79_RS16635	COG2814	Major facilitator Superfamily
F1C79_RS16640	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
F1C79_RS16655	COG0537	adenosine 5'-monophosphoramidase activity
F1C79_RS16660	COG0625	glutathione transferase activity
F1C79_RS16665	COG1643	Atp-dependent helicase
F1C79_RS16675	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS16680	COG2841	Protein conserved in bacteria
F1C79_RS16685	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS16690	COG2267	carboxylic ester hydrolase activity
F1C79_RS16695	COG2030	dehydratase
F1C79_RS16700	COG2814	Major facilitator Superfamily
F1C79_RS16735	COG0589	response to stress
F1C79_RS16755	COG2084	Dehydrogenase
F1C79_RS16760	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
F1C79_RS16770	COG3639	organic phosphonate transmembrane transporter activity
F1C79_RS16835	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
F1C79_RS16855	COG1607	acyl-coa hydrolase
F1C79_RS16860	COG0335	large ribosomal subunit rRNA binding
F1C79_RS16870	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
F1C79_RS16875	COG0228	four-way junction DNA binding
F1C79_RS16880	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
F1C79_RS16890	COG4536	flavin adenine dinucleotide binding
F1C79_RS16895	COG0477	Major facilitator Superfamily
F1C79_RS16935	COG2188	Transcriptional regulator
F1C79_RS16940	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
F1C79_RS16945	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
F1C79_RS16950	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
F1C79_RS16950	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
F1C79_RS16955	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
F1C79_RS16955	COG2190	(PTS) system
F1C79_RS16955	COG1263	PTS System
F1C79_RS16980	COG0590	tRNA wobble adenosine to inosine editing
F1C79_RS16985	COG2132	Multicopper oxidase
F1C79_RS17000	COG1570	exodeoxyribonuclease VII activity
F1C79_RS17010	COG0739	heme binding
F1C79_RS17045	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
F1C79_RS17055	COG2814	Major facilitator Superfamily
F1C79_RS17070	COG0667	Aldo Keto reductase
F1C79_RS17080	COG0436	Aminotransferase
F1C79_RS17150	COG0316	Belongs to the HesB IscA family
F1C79_RS17170	COG1045	serine acetyltransferase
F1C79_RS17185	COG3134	Outer membrane lipoprotein
F1C79_RS17200	COG1862	Preprotein translocase
F1C79_RS17345	COG4695	Portal protein
F1C79_RS17405	COG1484	DNA-dependent DNA replication
F1C79_RS17470	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
F1C79_RS17520	COG4970	Tfp pilus assembly protein FimT
F1C79_RS17550	COG2200	EAL domain
F1C79_RS17560	COG0795	lipopolysaccharide-transporting ATPase activity
F1C79_RS17565	COG0795	lipopolysaccharide-transporting ATPase activity
F1C79_RS17605	COG0471	metal ion transport
F1C79_RS17605	COG0490	domain, Protein
F1C79_RS17620	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
F1C79_RS17630	COG0583	DNA-binding transcription factor activity
F1C79_RS17655	COG0783	Belongs to the Dps family
F1C79_RS17670	COG0419	ATPase involved in DNA repair
F1C79_RS17675	COG0420	3'-5' exonuclease activity
F1C79_RS17685	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
F1C79_RS17740	COG1126	abc transporter atp-binding protein
F1C79_RS17745	COG0765	amino acid transport
F1C79_RS17750	COG4597	amino acid ABC transporter
F1C79_RS17755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS17760	COG0400	carboxylic ester hydrolase activity
F1C79_RS17765	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS17770	COG3706	GGDEF domain
F1C79_RS17785	COG0840	transmembrane signaling receptor activity
F1C79_RS17805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS17820	COG2181	nitrate reductase activity
F1C79_RS17825	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
F1C79_RS17830	COG1140	nitrate reductase beta subunit
F1C79_RS17835	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
F1C79_RS17840	COG2223	nitrite transmembrane transporter activity
F1C79_RS17850	COG3850	Histidine kinase
F1C79_RS17855	COG2197	response regulator
F1C79_RS17865	COG3154	lipid carrier protein
F1C79_RS17870	COG0826	peptidase U32
F1C79_RS17875	COG0826	peptidase U32
F1C79_RS17880	COG0303	'Molybdopterin
F1C79_RS17885	COG0521	Mo-molybdopterin cofactor biosynthetic process
F1C79_RS17900	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
F1C79_RS17905	COG0315	cyclic pyranopterin monophosphate synthase activity
F1C79_RS17910	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
F1C79_RS17925	COG0477	Major facilitator Superfamily
F1C79_RS17930	COG0583	DNA-binding transcription factor activity
F1C79_RS17935	COG3022	response to hydroperoxide
F1C79_RS18015	COG0300	oxidoreductase activity
F1C79_RS18055	COG1566	PFAM secretion protein HlyD family protein
F1C79_RS18075	COG0583	DNA-binding transcription factor activity
F1C79_RS18085	COG0697	spore germination
F1C79_RS18115	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS18120	COG0697	spore germination
F1C79_RS18125	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
F1C79_RS18130	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS18145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS18175	COG3246	L-lysine catabolic process to acetate
F1C79_RS18185	COG0673	inositol 2-dehydrogenase activity
F1C79_RS18200	COG3551	Protein conserved in bacteria
F1C79_RS18215	COG2197	response regulator
F1C79_RS18245	COG1024	Enoyl-CoA hydratase
F1C79_RS18250	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS18275	COG1346	cytolysis
F1C79_RS18280	COG1380	Effector of murein hydrolase LrgA
F1C79_RS18285	COG0583	DNA-binding transcription factor activity
F1C79_RS18310	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
F1C79_RS18330	COG0492	ferredoxin-NADP+ reductase activity
F1C79_RS18335	COG5001	Diguanylate cyclase
F1C79_RS18350	COG1307	EDD domain protein, DegV family
F1C79_RS18360	COG1309	transcriptional regulator
F1C79_RS18365	COG0583	DNA-binding transcription factor activity
F1C79_RS18380	COG0386	Belongs to the glutathione peroxidase family
F1C79_RS18405	COG0204	Acyl-transferase
F1C79_RS18410	COG2885	chlorophyll binding
F1C79_RS18415	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
F1C79_RS18420	COG2197	response regulator
F1C79_RS18475	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS18480	COG0183	Belongs to the thiolase family
F1C79_RS18485	COG1280	lysine exporter protein (LysE YggA)
F1C79_RS18495	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
F1C79_RS18510	COG0833	amino acid
F1C79_RS18515	COG2119	membrane
F1C79_RS18530	COG0501	Belongs to the peptidase M48B family
F1C79_RS18535	COG0840	transmembrane signaling receptor activity
F1C79_RS18540	COG2135	peptidase activity
F1C79_RS18580	COG2764	glyoxalase bleomycin resistance protein dioxygenase
F1C79_RS18600	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS18610	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
F1C79_RS18635	COG0788	formyltetrahydrofolate deformylase activity
F1C79_RS18645	COG2925	Exonuclease
F1C79_RS18675	COG0714	Associated with various cellular activities
F1C79_RS18705	COG0589	response to stress
F1C79_RS18715	COG1024	Enoyl-CoA hydratase
F1C79_RS18745	COG0693	protein deglycase activity
F1C79_RS18760	COG2271	Major facilitator Superfamily
F1C79_RS18765	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS18770	COG0583	DNA-binding transcription factor activity
F1C79_RS18795	COG1538	Outer membrane efflux protein
F1C79_RS18830	COG0667	Aldo Keto reductase
F1C79_RS18840	COG1982	Orn Lys Arg decarboxylase major
F1C79_RS18845	COG0531	amino acid
F1C79_RS18865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
F1C79_RS18875	COG0583	DNA-binding transcription factor activity
F1C79_RS18880	COG0477	Major facilitator Superfamily
F1C79_RS18900	COG0426	domain, Protein
F1C79_RS18900	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
F1C79_RS18920	COG0589	response to stress
F1C79_RS18935	COG2814	Major facilitator Superfamily
F1C79_RS18940	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS18955	COG1918	ferrous iron import across plasma membrane
F1C79_RS18970	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
F1C79_RS19030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS19035	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
F1C79_RS19090	COG1090	epimerase
F1C79_RS19095	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
F1C79_RS19100	COG3272	Protein of unknown function (DUF1722)
F1C79_RS19110	COG0415	Belongs to the DNA photolyase family
F1C79_RS19125	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
F1C79_RS19155	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
F1C79_RS19200	COG1487	ribonuclease activity
F1C79_RS19210	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
F1C79_RS19210	COG2755	lipolytic protein G-D-S-L family
F1C79_RS19215	COG4974	Belongs to the 'phage' integrase family
F1C79_RS19225	COG4128	Pfam Zonular occludens toxin
F1C79_RS19285	COG2135	peptidase activity
F1C79_RS19290	COG0473	3-isopropylmalate dehydrogenase activity
F1C79_RS19295	COG0288	reversible hydration of carbon dioxide
F1C79_RS19310	COG0456	acetyltransferase
F1C79_RS19355	COG3008	intermembrane lipid transfer
F1C79_RS19360	COG2995	paraquat-inducible protein a
F1C79_RS19365	COG2995	paraquat-inducible protein a
F1C79_RS19395	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
F1C79_RS19400	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
F1C79_RS19405	COG1183	phosphatidylcholine synthase activity
F1C79_RS19420	COG0028	Belongs to the TPP enzyme family
F1C79_RS19430	COG3098	single-species biofilm formation
F1C79_RS19440	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
F1C79_RS19470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
F1C79_RS19475	COG4558	Periplasmic binding protein
F1C79_RS19480	COG3720	iron ion transport
F1C79_RS19495	COG0436	Aminotransferase
F1C79_RS19500	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
F1C79_RS19515	COG4191	Histidine kinase
F1C79_RS19580	COG2197	response regulator
F1C79_RS19625	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
F1C79_RS19635	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
F1C79_RS19645	COG0195	Participates in both transcription termination and antitermination
F1C79_RS19680	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
F1C79_RS19685	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
F1C79_RS19690	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
F1C79_RS19745	COG0497	DNA recombination
F1C79_RS19780	COG1620	l-lactate permease
F1C79_RS19785	COG1304	FMN binding
F1C79_RS19850	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS19860	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
F1C79_RS19915	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
F1C79_RS19920	COG1228	amidohydrolase
F1C79_RS19925	COG0402	S-adenosylhomocysteine deaminase activity
F1C79_RS19935	COG1177	transmembrane transport
F1C79_RS19940	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS19945	COG3842	ATPase activity
F1C79_RS19955	COG0523	cobalamin synthesis protein
F1C79_RS19960	COG2879	small protein
F1C79_RS19965	COG1966	Carbon starvation protein
F1C79_RS19995	COG1970	mechanosensitive ion channel activity
F1C79_RS20000	COG1253	flavin adenine dinucleotide binding
F1C79_RS20025	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
F1C79_RS20030	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
F1C79_RS20030	COG3608	succinylglutamate desuccinylase aspartoacylase
F1C79_RS20050	COG2814	Major facilitator Superfamily
F1C79_RS20060	COG1294	oxidase, subunit
F1C79_RS20065	COG1271	oxidase subunit
F1C79_RS20075	COG0626	cystathionine gamma-synthase activity
F1C79_RS20080	COG3829	transcription factor binding
F1C79_RS20090	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
F1C79_RS20105	COG1297	OPT oligopeptide transporter protein
F1C79_RS20110	COG2175	clavaminate synthase activity
F1C79_RS20115	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS20125	COG4521	taurine ABC transporter
F1C79_RS20135	COG0697	spore germination
F1C79_RS20140	COG1522	sequence-specific DNA binding
F1C79_RS20145	COG0183	Belongs to the thiolase family
F1C79_RS20150	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS20175	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
F1C79_RS20205	COG0509	glycine decarboxylation via glycine cleavage system
F1C79_RS20280	COG2814	Major facilitator Superfamily
F1C79_RS20285	COG2022	thiamine diphosphate biosynthetic process
F1C79_RS20305	COG3276	selenocysteine insertion sequence binding
F1C79_RS20310	COG1921	L-seryl-tRNASec selenium transferase activity
F1C79_RS20320	COG2864	formate dehydrogenase
F1C79_RS20325	COG0437	4 iron, 4 sulfur cluster binding
F1C79_RS20340	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS20340	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS20355	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
F1C79_RS20365	COG0534	Mate efflux family protein
F1C79_RS20400	COG0431	NADPH-dependent FMN reductase
F1C79_RS20415	COG0484	heat shock protein binding
F1C79_RS20445	COG0023	Translation Initiation Factor
F1C79_RS20470	COG0010	Belongs to the arginase family
F1C79_RS20540	COG2095	MarC family integral membrane protein
F1C79_RS20545	COG0683	leucine binding
F1C79_RS20580	COG0831	urea catabolic process
F1C79_RS20590	COG0832	Belongs to the urease beta subunit family
F1C79_RS20620	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
F1C79_RS20635	COG0443	Heat shock 70 kDa protein
F1C79_RS20655	COG2982	Protein involved in outer membrane biogenesis
F1C79_RS20705	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
F1C79_RS20725	COG4221	oxidoreductase activity
F1C79_RS20730	COG2423	ornithine cyclodeaminase activity
F1C79_RS20760	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS20765	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS20770	COG0583	DNA-binding transcription factor activity
F1C79_RS20790	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
F1C79_RS20795	COG1272	protein, Hemolysin III
F1C79_RS20835	COG0668	transmembrane transport
F1C79_RS20850	COG2703	oxygen carrier activity
F1C79_RS20860	COG5001	Diguanylate cyclase
F1C79_RS20860	COG3300	MHYT domain
F1C79_RS20870	COG0305	Participates in initiation and elongation during chromosome replication
F1C79_RS20890	COG0360	Binds together with S18 to 16S ribosomal RNA
F1C79_RS20900	COG0557	exoribonuclease II activity
F1C79_RS20935	COG0330	HflC and HflK could
F1C79_RS20940	COG0330	HflC and HflK could
F1C79_RS20945	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
F1C79_RS20965	COG0860	N-Acetylmuramoyl-L-alanine amidase
F1C79_RS20970	COG0802	atpase or kinase
F1C79_RS20975	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
F1C79_RS20975	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
F1C79_RS21030	COG5001	Diguanylate cyclase
F1C79_RS21030	COG5002	protein histidine kinase activity
F1C79_RS21035	COG0560	Phosphoserine phosphatase
F1C79_RS21035	COG3830	Belongs to the UPF0237 family
F1C79_RS21045	COG1988	membrane-bound metal-dependent
F1C79_RS21070	COG3577	Aspartyl protease
F1C79_RS21085	COG3150	esterase
F1C79_RS21090	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
F1C79_RS21100	COG0494	nUDIX hydrolase
F1C79_RS21110	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
F1C79_RS21120	COG1538	Outer membrane efflux protein
F1C79_RS21140	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS21140	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS21155	COG1519	Transferase
F1C79_RS21175	COG0667	Aldo Keto reductase
F1C79_RS21185	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS21190	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS21210	COG1132	(ABC) transporter
F1C79_RS21225	COG0463	Glycosyl transferase, family 2
F1C79_RS21245	COG0438	transferase activity, transferring glycosyl groups
F1C79_RS21250	COG2192	nodulation
F1C79_RS21275	COG0438	transferase activity, transferring glycosyl groups
F1C79_RS21285	COG0859	PFAM glycosyl transferase family 9
F1C79_RS21310	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
F1C79_RS21320	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
F1C79_RS21325	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS21345	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
F1C79_RS21350	COG2873	o-acetylhomoserine
F1C79_RS21355	COG0840	transmembrane signaling receptor activity
F1C79_RS21370	COG3118	belongs to the thioredoxin family
F1C79_RS21385	COG1192	Involved in chromosome partitioning
F1C79_RS21405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
F1C79_RS21430	COG2986	histidine ammonia-lyase
F1C79_RS21460	COG2226	methyltransferase
F1C79_RS21480	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS21485	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
F1C79_RS21500	COG0583	DNA-binding transcription factor activity
F1C79_RS21505	COG2814	Major facilitator Superfamily
F1C79_RS21520	COG0493	'glutamate synthase
F1C79_RS21525	COG0070	glutamate synthase
F1C79_RS21525	COG0067	glutamate synthase
F1C79_RS21525	COG0069	glutamate synthase activity
F1C79_RS21580	COG1451	nucleotide metabolic process
F1C79_RS21585	COG2226	methyltransferase
F1C79_RS21610	COG0126	phosphoglycerate kinase activity
F1C79_RS21615	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
F1C79_RS21620	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
F1C79_RS21640	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
F1C79_RS21650	COG3509	depolymerase
F1C79_RS21695	COG4521	taurine ABC transporter
F1C79_RS21705	COG0583	DNA-binding transcription factor activity
F1C79_RS21710	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS21715	COG1804	L-carnitine dehydratase bile acid-inducible protein F
F1C79_RS21720	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
F1C79_RS21725	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
F1C79_RS21730	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
F1C79_RS21735	COG0513	Belongs to the DEAD box helicase family
F1C79_RS21740	COG1126	abc transporter atp-binding protein
F1C79_RS21745	COG0765	amino acid transport
F1C79_RS21765	COG1490	D-aminoacyl-tRNA deacylase activity
F1C79_RS21785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS21820	COG2986	histidine ammonia-lyase
F1C79_RS21825	COG4175	Glycine betaine
F1C79_RS21825	COG0517	IMP dehydrogenase activity
F1C79_RS21830	COG4176	ABC-type proline glycine betaine transport system permease component
F1C79_RS21840	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
F1C79_RS21855	COG2986	histidine ammonia-lyase
F1C79_RS21870	COG0402	S-adenosylhomocysteine deaminase activity
F1C79_RS21910	COG1217	gtp-binding protein TYPA
F1C79_RS21940	COG3852	Histidine kinase
F1C79_RS21950	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
F1C79_RS21970	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
F1C79_RS21980	COG4942	peptidase
F1C79_RS21985	COG0793	Belongs to the peptidase S41A family
F1C79_RS21990	COG2861	carbohydrate metabolic process
F1C79_RS22040	COG1194	a g-specific adenine glycosylase
F1C79_RS22045	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
F1C79_RS22055	COG3408	Glycogen debranching enzyme
F1C79_RS22055	COG3119	arylsulfatase activity
F1C79_RS22065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS22085	COG1846	Transcriptional regulator
F1C79_RS22095	COG1566	PFAM secretion protein HlyD family protein
F1C79_RS22100	COG2814	Major facilitator Superfamily
F1C79_RS22115	COG4695	Portal protein
F1C79_RS22355	COG1088	dTDP-glucose 4,6-dehydratase activity
F1C79_RS22360	COG1091	dTDP-4-dehydrorhamnose reductase activity
F1C79_RS22385	COG1088	dTDP-glucose 4,6-dehydratase activity
F1C79_RS22400	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
F1C79_RS22445	COG0693	protein deglycase activity
F1C79_RS22460	COG0129	dihydroxy-acid dehydratase activity
F1C79_RS22470	COG2233	PERMEase
F1C79_RS22480	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
F1C79_RS22510	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS22525	COG0778	Nitroreductase
F1C79_RS22555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
F1C79_RS22560	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
F1C79_RS22565	COG4067	protein conserved in archaea
F1C79_RS22565	COG0189	ligase activity
F1C79_RS22590	COG2183	response to ionizing radiation
F1C79_RS22630	COG0330	HflC and HflK could
F1C79_RS22645	COG0730	response to heat
F1C79_RS22660	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
F1C79_RS22665	COG0494	nUDIX hydrolase
F1C79_RS22690	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
F1C79_RS22710	COG3204	pilus organization
F1C79_RS22720	COG3842	ATPase activity
F1C79_RS22730	COG1177	transmembrane transport
F1C79_RS22735	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
F1C79_RS22740	COG0531	amino acid
F1C79_RS22750	COG3111	PFAM Bacterial OB fold (BOF) protein
F1C79_RS22760	COG0179	Fumarylacetoacetate (FAA) hydrolase
F1C79_RS22765	COG0277	FAD linked oxidase domain protein
F1C79_RS22775	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
F1C79_RS22785	COG1683	Conserved Protein
F1C79_RS22830	COG1177	transmembrane transport
F1C79_RS22835	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS22840	COG3842	ATPase activity
F1C79_RS22860	COG0174	glutamine synthetase
F1C79_RS22865	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
F1C79_RS22870	COG0174	glutamine synthetase
F1C79_RS22905	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
F1C79_RS22910	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
F1C79_RS22975	COG2199	diguanylate cyclase activity
F1C79_RS22995	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
F1C79_RS23005	COG4208	sulfate ABC transporter
F1C79_RS23020	COG1309	transcriptional regulator
F1C79_RS23025	COG4221	oxidoreductase activity
F1C79_RS23050	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS23090	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
F1C79_RS23135	COG1011	Hydrolase
F1C79_RS23145	COG0432	Pfam Uncharacterised protein family UPF0047
F1C79_RS23150	COG0004	ammonium transporteR
F1C79_RS23155	COG0347	Belongs to the P(II) protein family
F1C79_RS23165	COG0606	chelatase, subunit chli
F1C79_RS23180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS23185	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
F1C79_RS23190	COG0840	transmembrane signaling receptor activity
F1C79_RS23210	COG3059	membrane
F1C79_RS23220	COG0583	DNA-binding transcription factor activity
F1C79_RS23255	COG1396	sequence-specific DNA binding
F1C79_RS23255	COG1917	Cupin 2, conserved barrel domain protein
F1C79_RS23295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS23300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
F1C79_RS23310	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS23330	COG0747	negative chemotaxis
F1C79_RS23335	COG2003	Belongs to the UPF0758 family
F1C79_RS23340	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
F1C79_RS23360	COG0824	Thioesterase
F1C79_RS23375	COG0708	Exodeoxyribonuclease III
F1C79_RS23390	COG1561	YicC-like family, N-terminal region
F1C79_RS23405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
F1C79_RS23440	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
F1C79_RS23500	COG1253	flavin adenine dinucleotide binding
F1C79_RS23505	COG0739	heme binding
F1C79_RS23525	COG0573	inorganic phosphate transmembrane transporter activity
F1C79_RS23575	COG1607	acyl-coa hydrolase
F1C79_RS23600	COG2391	methyltransferase activity
F1C79_RS23620	COG0676	glucose-6-phosphate 1-epimerase activity
F1C79_RS23655	COG4774	siderophore transport
F1C79_RS23670	COG0583	DNA-binding transcription factor activity
F1C79_RS23695	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
F1C79_RS23700	COG2181	nitrate reductase activity
F1C79_RS23700	COG0247	lactate metabolic process
F1C79_RS23705	COG0446	pyridine nucleotide-disulphide oxidoreductase
F1C79_RS23705	COG1902	pentaerythritol trinitrate reductase activity
F1C79_RS23725	COG1017	nitric oxide dioxygenase activity
F1C79_RS23725	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
F1C79_RS23735	COG0393	Putative heavy-metal-binding
F1C79_RS23805	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
F1C79_RS23820	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS23825	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
F1C79_RS23830	COG0583	DNA-binding transcription factor activity
F1C79_RS23845	COG2824	Alkylphosphonate utilization operon protein PhnA
F1C79_RS23865	COG5016	pyruvate
F1C79_RS23865	COG0511	ligase activity, forming carbon-carbon bonds
F1C79_RS23870	COG0439	Biotin carboxylase
F1C79_RS23875	COG0583	DNA-binding transcription factor activity
F1C79_RS23890	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
F1C79_RS23895	COG0826	peptidase U32
F1C79_RS23920	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS23925	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
F1C79_RS23930	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS23945	COG3256	nitric oxide reductase
F1C79_RS23950	COG2010	Cytochrome c
F1C79_RS23960	COG1845	cytochrome c oxidase, subunit III
F1C79_RS23965	COG0714	Associated with various cellular activities
F1C79_RS24015	COG0475	glutathione-regulated potassium exporter activity
F1C79_RS24045	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
F1C79_RS24050	COG0174	glutamine synthetase
F1C79_RS24055	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS24060	COG1607	acyl-coa hydrolase
F1C79_RS24065	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
F1C79_RS24065	COG4651	solute:proton antiporter activity
F1C79_RS24095	COG4191	Histidine kinase
F1C79_RS24120	COG2249	NAD(P)H dehydrogenase (quinone) activity
F1C79_RS24145	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS24150	COG1024	Enoyl-CoA hydratase
F1C79_RS24155	COG0833	amino acid
F1C79_RS24180	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
F1C79_RS24195	COG0596	Alpha beta hydrolase
F1C79_RS24200	COG4175	Glycine betaine
F1C79_RS24205	COG4176	ABC-type proline glycine betaine transport system permease component
F1C79_RS24220	COG1760	l-serine dehydratase
F1C79_RS24250	COG2944	sequence-specific DNA binding
F1C79_RS24300	COG0657	acetylesterase activity
F1C79_RS24305	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS24305	COG0824	Thioesterase
F1C79_RS24315	COG3246	L-lysine catabolic process to acetate
F1C79_RS24375	COG2851	Citrate transporter
F1C79_RS24380	COG0861	Integral membrane protein TerC family
F1C79_RS24395	COG1283	sodium-dependent phosphate transmembrane transporter activity
F1C79_RS24430	COG0700	Nucleoside recognition
F1C79_RS24435	COG1301	dicarboxylic acid transport
F1C79_RS24490	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
F1C79_RS24540	COG1475	DNA binding
F1C79_RS24545	COG1192	Involved in chromosome partitioning
F1C79_RS24575	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
F1C79_RS24630	COG2818	Glycosylase
F1C79_RS24650	COG1914	H( )-stimulated, divalent metal cation uptake system
F1C79_RS24660	COG1126	abc transporter atp-binding protein
F1C79_RS24665	COG0765	amino acid transport
F1C79_RS24670	COG0765	amino acid transport
F1C79_RS24675	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS24680	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS24685	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
F1C79_RS24690	COG2423	ornithine cyclodeaminase activity
F1C79_RS24695	COG0006	proline dipeptidase activity
F1C79_RS24700	COG3608	succinylglutamate desuccinylase aspartoacylase
F1C79_RS24705	COG1522	sequence-specific DNA binding
F1C79_RS24710	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
F1C79_RS24715	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS24720	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
F1C79_RS24730	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
F1C79_RS24735	COG0569	domain protein
F1C79_RS24755	COG1652	LysM domain
F1C79_RS24760	COG0758	DNA mediated transformation
F1C79_RS24780	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
F1C79_RS24785	COG0659	secondary active sulfate transmembrane transporter activity
F1C79_RS24795	COG3119	arylsulfatase activity
F1C79_RS24800	COG0583	DNA-binding transcription factor activity
F1C79_RS24810	COG1595	DNA-templated transcription, initiation
F1C79_RS24830	COG2207	Transcriptional regulator
F1C79_RS24835	COG0346	lactoylglutathione lyase activity
F1C79_RS24845	COG0159	tryptophan synthase activity
F1C79_RS24860	COG3360	Dodecin
F1C79_RS24870	COG1764	response to oxidative stress
F1C79_RS24895	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS24900	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS24920	COG1024	Enoyl-CoA hydratase
F1C79_RS24920	COG1250	3-hydroxyacyl-CoA dehydrogenase
F1C79_RS24930	COG2267	carboxylic ester hydrolase activity
F1C79_RS24935	COG2153	protein acetylation
F1C79_RS24960	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
F1C79_RS25025	COG0463	Glycosyl transferase, family 2
F1C79_RS25035	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
F1C79_RS25040	COG2755	lipolytic protein G-D-S-L family
F1C79_RS25040	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
F1C79_RS25045	COG2755	lipolytic protein G-D-S-L family
F1C79_RS25045	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
F1C79_RS25075	COG0662	Cupin 2, conserved barrel domain protein
F1C79_RS25075	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
F1C79_RS25095	COG0438	transferase activity, transferring glycosyl groups
F1C79_RS25115	COG0427	acetyl-CoA hydrolase
F1C79_RS25170	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
F1C79_RS25175	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
F1C79_RS25180	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
F1C79_RS25190	COG0659	secondary active sulfate transmembrane transporter activity
F1C79_RS25210	COG0306	phosphate transporter
F1C79_RS25215	COG2026	Addiction module toxin, RelE StbE family
F1C79_RS25225	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
F1C79_RS25230	COG0339	signal peptide processing
F1C79_RS25235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
F1C79_RS25265	COG2072	flavoprotein involved in K transport
F1C79_RS25295	COG2161	toxin-antitoxin pair type II binding
F1C79_RS25305	COG0454	-acetyltransferase
F1C79_RS25350	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
F1C79_RS25360	COG0840	transmembrane signaling receptor activity
F1C79_RS25365	COG0835	chemotaxis
F1C79_RS25370	COG2198	Histidine kinase
F1C79_RS25370	COG0643	Histidine kinase
F1C79_RS25375	COG0745	RESPONSE REGULATOR receiver
F1C79_RS25395	COG0477	Major facilitator Superfamily
F1C79_RS25400	COG2207	Transcriptional regulator
F1C79_RS25415	COG1309	transcriptional regulator
F1C79_RS25425	COG0840	transmembrane signaling receptor activity
F1C79_RS25435	COG1529	Aldehyde oxidase and xanthine dehydrogenase
F1C79_RS25495	COG2011	ABC-type metal ion transport system permease component
F1C79_RS25510	COG1108	ABC-type Mn2 Zn2 transport systems permease components
F1C79_RS25520	COG0735	belongs to the Fur family
F1C79_RS25525	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
F1C79_RS25585	COG1349	DNA-binding transcription factor activity
F1C79_RS25595	COG0477	Major facilitator Superfamily
F1C79_RS25600	COG0477	Major facilitator Superfamily
F1C79_RS25605	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
F1C79_RS25610	COG0456	acetyltransferase
F1C79_RS25660	COG0387	Pfam Sodium calcium exchanger
F1C79_RS25670	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
F1C79_RS25675	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS25680	COG0583	DNA-binding transcription factor activity
F1C79_RS25705	COG1684	flagellar biosynthetic protein fliR
F1C79_RS25710	COG1987	bacterial-type flagellum assembly
F1C79_RS25720	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
F1C79_RS25720	COG1776	CheC inhibitor of MCP methylation
F1C79_RS25735	COG1677	Flagellar hook-basal body complex protein FliE
F1C79_RS25740	COG1766	The M ring may be actively involved in energy transduction
F1C79_RS25775	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
F1C79_RS25800	COG1191	sigma factor activity
F1C79_RS25805	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
F1C79_RS25820	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
F1C79_RS25825	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
F1C79_RS25830	COG2267	carboxylic ester hydrolase activity
F1C79_RS25835	COG2453	phosphatase
F1C79_RS25835	COG0671	phosphoesterase, PA-phosphatase related
F1C79_RS25850	COG4589	Belongs to the CDS family
F1C79_RS25865	COG1815	bacterial-type flagellum-dependent cell motility
F1C79_RS25870	COG1558	bacterial-type flagellum-dependent cell motility
F1C79_RS25880	COG1749	Flagellar hook protein flgE
F1C79_RS25890	COG4786	Flagellar basal body rod
F1C79_RS25900	COG1706	bacterial-type flagellum-dependent cell motility
F1C79_RS25905	COG0741	lytic transglycosylase activity
F1C79_RS25910	COG4786	Flagellar basal body rod
F1C79_RS25910	COG1256	bacterial-type flagellum assembly
F1C79_RS25915	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
F1C79_RS25925	COG2076	Multidrug Resistance protein
F1C79_RS25935	COG0659	secondary active sulfate transmembrane transporter activity
F1C79_RS25945	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS25950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS25970	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
F1C79_RS25990	COG4771	TonB-dependent receptor
F1C79_RS25995	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
F1C79_RS26020	COG2095	MarC family integral membrane protein
F1C79_RS26025	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
F1C79_RS26050	COG0745	RESPONSE REGULATOR receiver
F1C79_RS26065	COG2972	Histidine kinase
F1C79_RS26065	COG0745	RESPONSE REGULATOR receiver
F1C79_RS26120	COG0488	(ABC) transporter
F1C79_RS26130	COG0861	Integral membrane protein TerC family
F1C79_RS26135	COG1280	lysine exporter protein (LysE YggA)
F1C79_RS26140	COG0672	)-iron permease
F1C79_RS26145	COG1671	Belongs to the UPF0178 family
F1C79_RS26150	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
F1C79_RS26160	COG0586	Pfam SNARE associated Golgi protein
F1C79_RS26175	COG0248	Ppx GppA phosphatase
F1C79_RS26200	COG0583	DNA-binding transcription factor activity
F1C79_RS26210	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS26215	COG1177	transmembrane transport
F1C79_RS26225	COG0154	amidase activity
F1C79_RS26235	COG0318	PFAM AMP-dependent synthetase and ligase
F1C79_RS26240	COG0604	alcohol dehydrogenase
F1C79_RS26250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS26255	COG1129	ABC transporter
F1C79_RS26255	COG0842	Transport permease protein
F1C79_RS26260	COG0842	Transport permease protein
F1C79_RS26265	COG3300	MHYT domain
F1C79_RS26265	COG5001	Diguanylate cyclase
F1C79_RS26280	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
F1C79_RS26305	COG0006	proline dipeptidase activity
F1C79_RS26310	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS26320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
F1C79_RS26335	COG1178	ABC-type Fe3 transport system permease component
F1C79_RS26395	COG1454	alcohol dehydrogenase
F1C79_RS26400	COG0824	Thioesterase
F1C79_RS26430	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
F1C79_RS26435	COG0583	DNA-binding transcription factor activity
F1C79_RS26440	COG1652	LysM domain
F1C79_RS26445	COG1011	Hydrolase
F1C79_RS26450	COG0494	nUDIX hydrolase
F1C79_RS26485	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
F1C79_RS26490	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
F1C79_RS26495	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
F1C79_RS26520	COG0429	hydrolase of the alpha beta-hydrolase fold
F1C79_RS26540	COG0742	ribosomal rna small subunit methyltransferase
F1C79_RS26545	COG0612	Peptidase, M16
F1C79_RS26550	COG0612	Peptidase, M16
F1C79_RS26555	COG0552	protein localization to endoplasmic reticulum
F1C79_RS26560	COG2884	Cell division ATP-binding protein ftsE
F1C79_RS26565	COG2177	Part of the ABC transporter FtsEX involved in
F1C79_RS26585	COG2363	Small membrane protein
F1C79_RS26600	COG0220	tRNA (guanine-N7-)-methyltransferase activity
F1C79_RS26620	COG0635	Involved in the biosynthesis of porphyrin-containing compound
F1C79_RS26635	COG2813	Specifically methylates the guanine in position
F1C79_RS26635	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
F1C79_RS26650	COG1872	DUF167
F1C79_RS26695	COG0626	cystathionine gamma-synthase activity
F1C79_RS26755	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
F1C79_RS26755	COG0457	Tetratricopeptide repeat
F1C79_RS26775	COG2207	Transcriptional regulator
F1C79_RS26775	COG1917	Cupin 2, conserved barrel domain protein
F1C79_RS26810	COG3038	cytochrome b561
F1C79_RS26845	COG0840	transmembrane signaling receptor activity
F1C79_RS26850	COG0840	transmembrane signaling receptor activity
F1C79_RS26875	COG0140	phosphoribosyl-ATP diphosphatase activity
F1C79_RS26960	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
F1C79_RS26980	COG0281	malic enzyme
F1C79_RS26990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
F1C79_RS26995	COG1289	transmembrane transporter activity
F1C79_RS27000	COG0513	Belongs to the DEAD box helicase family
F1C79_RS27015	COG0477	Major facilitator Superfamily
F1C79_RS27030	COG0204	Acyl-transferase
F1C79_RS27040	COG0745	RESPONSE REGULATOR receiver
F1C79_RS27045	COG2205	protein histidine kinase activity
F1C79_RS27050	COG4452	Inner membrane protein CreD
F1C79_RS27080	COG4774	siderophore transport
F1C79_RS27085	COG3712	iron ion homeostasis
F1C79_RS27090	COG1595	DNA-templated transcription, initiation
F1C79_RS27095	COG0625	glutathione transferase activity
F1C79_RS27105	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
F1C79_RS27110	COG1953	Uracil, thiamine, allantoin
F1C79_RS27140	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
F1C79_RS27150	COG3585	molybdate ion transport
F1C79_RS27150	COG2005	Transcriptional regulator
F1C79_RS27175	COG2226	methyltransferase
F1C79_RS27175	COG1073	alpha beta
F1C79_RS27195	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS27205	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS27215	COG0583	DNA-binding transcription factor activity
F1C79_RS27220	COG2258	MOSC domain
F1C79_RS27230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS27240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS27250	COG0174	glutamine synthetase
F1C79_RS27260	COG0840	transmembrane signaling receptor activity
F1C79_RS27365	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
F1C79_RS27375	COG0431	NADPH-dependent FMN reductase
F1C79_RS27380	COG0798	PFAM Bile acid sodium symporter
F1C79_RS27385	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
F1C79_RS27390	COG0640	Transcriptional regulator
F1C79_RS27420	COG1846	Transcriptional regulator
F1C79_RS27435	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
F1C79_RS27490	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
F1C79_RS27510	COG2719	SpoVR family
F1C79_RS27520	COG2766	serine protein kinase
F1C79_RS27535	COG2967	ApaG domain
F1C79_RS27545	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
F1C79_RS27570	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
F1C79_RS27585	COG2197	response regulator
F1C79_RS27595	COG3842	ATPase activity
F1C79_RS27605	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS27615	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
F1C79_RS27725	COG3179	chitinase
F1C79_RS27745	COG0582	viral genome integration into host DNA
F1C79_RS27795	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
F1C79_RS27850	COG1484	DNA-dependent DNA replication
F1C79_RS27915	COG0740	serine-type endopeptidase activity
F1C79_RS28045	COG1765	OsmC-like protein
F1C79_RS28065	COG0537	adenosine 5'-monophosphoramidase activity
F1C79_RS28070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
F1C79_RS28085	COG2070	2-Nitropropane dioxygenase
F1C79_RS28090	COG1981	membrane
F1C79_RS28105	COG0316	Belongs to the HesB IscA family
F1C79_RS28115	COG0739	heme binding
F1C79_RS28120	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
F1C79_RS28150	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
F1C79_RS28150	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
F1C79_RS28240	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
F1C79_RS28250	COG0051	transcription antitermination factor activity, RNA binding
F1C79_RS28280	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
F1C79_RS28285	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
F1C79_RS28350	COG0200	Binds to the 23S rRNA
F1C79_RS28360	COG0257	Belongs to the bacterial ribosomal protein bL36 family
F1C79_RS28405	COG2814	Major facilitator Superfamily
F1C79_RS28425	COG3712	iron ion homeostasis
F1C79_RS28430	COG1595	DNA-templated transcription, initiation
F1C79_RS28470	COG0625	glutathione transferase activity
F1C79_RS28490	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
F1C79_RS28495	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
F1C79_RS28530	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS28535	COG0348	domain, Protein
F1C79_RS28540	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
F1C79_RS28555	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
F1C79_RS28560	COG3094	Invasion gene expression up-regulator, SirB
F1C79_RS28600	COG2264	protein methyltransferase activity
F1C79_RS28615	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
F1C79_RS28615	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
F1C79_RS28645	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
F1C79_RS28655	COG3577	Aspartyl protease
F1C79_RS28685	COG0583	DNA-binding transcription factor activity
F1C79_RS28690	COG0586	Pfam SNARE associated Golgi protein
F1C79_RS28730	COG0768	penicillin binding
F1C79_RS28735	COG0772	Belongs to the SEDS family
F1C79_RS28740	COG2951	lytic endotransglycosylase activity
F1C79_RS28750	COG1686	Belongs to the peptidase S11 family
F1C79_RS28770	COG3539	Fimbrial protein
F1C79_RS28775	COG3121	Chaperone
F1C79_RS28795	COG2951	lytic endotransglycosylase activity
F1C79_RS28810	COG3795	YCII-related domain
F1C79_RS28850	COG4535	Mg2 and Co2 transporter CorC
F1C79_RS28855	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
F1C79_RS28860	COG1702	phosphate starvation-inducible protein PhoH
F1C79_RS28890	COG0351	phosphomethylpyrimidine kinase
F1C79_RS28900	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
F1C79_RS28925	COG2030	dehydratase
F1C79_RS28930	COG2814	Major facilitator Superfamily
F1C79_RS28940	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS28945	COG1024	Enoyl-CoA hydratase
F1C79_RS28950	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS28955	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS28975	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS28985	COG3549	Plasmid maintenance system killer
F1C79_RS28995	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
F1C79_RS29000	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
F1C79_RS29005	COG0653	protein targeting
F1C79_RS29025	COG1522	sequence-specific DNA binding
F1C79_RS29040	COG2318	DinB family
F1C79_RS29050	COG1643	Atp-dependent helicase
F1C79_RS29065	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS29080	COG3416	Protein conserved in bacteria
F1C79_RS29090	COG0513	Belongs to the DEAD box helicase family
F1C79_RS29100	COG3842	ATPase activity
F1C79_RS29110	COG1176	ABC-type spermidine putrescine transport system, permease component I
F1C79_RS29115	COG1177	transmembrane transport
F1C79_RS29120	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS29145	COG0123	including yeast histone deacetylase and acetoin utilization protein
F1C79_RS29150	COG2814	Major facilitator Superfamily
F1C79_RS29165	COG1946	Acyl-CoA thioesterase
F1C79_RS29175	COG4206	TonB-dependent receptor
F1C79_RS29195	COG1012	belongs to the aldehyde dehydrogenase family
F1C79_RS29200	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
F1C79_RS29210	COG1126	abc transporter atp-binding protein
F1C79_RS29215	COG0765	amino acid transport
F1C79_RS29220	COG0765	amino acid transport
F1C79_RS29250	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
F1C79_RS29265	COG0142	geranyltranstransferase activity
F1C79_RS29290	COG0586	Pfam SNARE associated Golgi protein
F1C79_RS29300	COG0456	acetyltransferase
F1C79_RS29335	COG4302	ethanolamine ammonia-lyase activity
F1C79_RS29365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
F1C79_RS29380	COG0702	epimerase
F1C79_RS29400	COG1346	cytolysis
F1C79_RS29430	COG1802	Transcriptional regulator
F1C79_RS29485	COG1126	abc transporter atp-binding protein
F1C79_RS29490	COG0765	amino acid transport
F1C79_RS29495	COG0765	amino acid transport
F1C79_RS29520	COG5002	protein histidine kinase activity
F1C79_RS29520	COG2205	protein histidine kinase activity
F1C79_RS29520	COG0784	Response regulator, receiver
F1C79_RS29540	COG0697	spore germination
F1C79_RS29560	COG2217	Heavy metal translocating P-type atpase
F1C79_RS29575	COG1309	transcriptional regulator
F1C79_RS29590	COG2814	Major facilitator Superfamily
F1C79_RS29605	COG4566	intracellular signal transduction
F1C79_RS29610	COG2321	neutral zinc metallopeptidase
F1C79_RS29620	COG0436	Aminotransferase
F1C79_RS29650	COG2252	PERMEase
F1C79_RS29655	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
F1C79_RS29670	COG0488	(ABC) transporter
F1C79_RS29680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
F1C79_RS29695	COG0430	RNA-3'-phosphate cyclase activity
F1C79_RS29700	COG3541	Predicted nucleotidyltransferase
F1C79_RS29710	COG1690	Belongs to the RtcB family
F1C79_RS29730	COG4650	regulator
F1C79_RS29785	COG0545	Peptidyl-prolyl cis-trans isomerase
F1C79_RS29790	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
F1C79_RS29795	COG0142	geranyltranstransferase activity
F1C79_RS29805	COG0211	Belongs to the bacterial ribosomal protein bL27 family
F1C79_RS29820	COG3045	CreA protein
F1C79_RS29830	COG0728	peptidoglycan biosynthetic process
F1C79_RS29835	COG0196	riboflavin kinase activity
F1C79_RS29850	COG1047	Peptidyl-prolyl cis-trans
F1C79_RS29975	COG2885	chlorophyll binding
F1C79_RS29975	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
F1C79_RS29985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS30020	COG1252	NADH dehydrogenase
F1C79_RS30075	COG4969	Belongs to the N-Me-Phe pilin family
F1C79_RS30090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
F1C79_RS30120	COG0084	hydrolase, TatD family'
F1C79_RS30125	COG1609	Transcriptional regulator
F1C79_RS30135	COG1105	Belongs to the carbohydrate kinase PfkB family
F1C79_RS30140	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
F1C79_RS30140	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
F1C79_RS30140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
F1C79_RS30150	COG2076	Multidrug Resistance protein
F1C79_RS30155	COG2076	Multidrug Resistance protein
F1C79_RS30165	COG0726	polysaccharide deacetylase
F1C79_RS30180	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
F1C79_RS30205	COG1309	transcriptional regulator
F1C79_RS30245	COG0019	diaminopimelate decarboxylase activity
F1C79_RS30250	COG2194	sulfuric ester hydrolase activity
F1C79_RS30265	COG4774	siderophore transport
F1C79_RS30270	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
F1C79_RS30295	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
F1C79_RS30300	COG1690	Belongs to the RtcB family
F1C79_RS30310	COG1280	lysine exporter protein (LysE YggA)
F1C79_RS30320	COG4608	Belongs to the ABC transporter superfamily
F1C79_RS30330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
F1C79_RS30340	COG0747	negative chemotaxis
F1C79_RS30350	COG0747	negative chemotaxis
F1C79_RS30370	COG0747	negative chemotaxis
F1C79_RS30385	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
F1C79_RS30390	COG4178	(ABC) transporter
F1C79_RS30395	COG0739	heme binding
F1C79_RS30415	COG4676	Protein conserved in bacteria
F1C79_RS30420	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
F1C79_RS30435	COG5445	Predicted secreted protein (DUF2300)
F1C79_RS30440	COG4676	Protein conserved in bacteria
F1C79_RS30445	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
F1C79_RS30450	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
F1C79_RS30455	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
F1C79_RS30470	COG1077	Cell shape determining protein MreB Mrl
F1C79_RS30475	COG1792	Involved in formation and maintenance of cell shape
F1C79_RS30485	COG0424	maF-like protein
F1C79_RS30490	COG1530	ribonuclease E activity
F1C79_RS30500	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
F1C79_RS30505	COG0312	modulator of DNA gyrase
F1C79_RS30515	COG0312	modulator of DNA gyrase
F1C79_RS30570	COG1137	ATPase activity
F1C79_RS30575	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
F1C79_RS30585	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
F1C79_RS30595	COG1127	ABC transporter
F1C79_RS30600	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
F1C79_RS30605	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
F1C79_RS30640	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
F1C79_RS30645	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
F1C79_RS30655	COG2951	lytic endotransglycosylase activity
F1C79_RS30660	COG0175	sulfate reduction
F1C79_RS30670	COG1595	DNA-templated transcription, initiation
F1C79_RS30690	COG2945	thiolester hydrolase activity
F1C79_RS30700	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
F1C79_RS30715	COG1960	acyl-CoA dehydrogenase activity
F1C79_RS30720	COG0667	Aldo Keto reductase
F1C79_RS30735	COG0723	plastoquinol--plastocyanin reductase activity
F1C79_RS30740	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
F1C79_RS30745	COG2857	Cytochrome c1
F1C79_RS30750	COG0625	glutathione transferase activity
F1C79_RS30755	COG2969	positive regulation of protein catabolic process
F1C79_RS30760	COG2823	Periplasmic or secreted lipoprotein
F1C79_RS30770	COG0792	nuclease activity
F1C79_RS30775	COG3107	peptidoglycan biosynthetic process
F1C79_RS30815	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
F1C79_RS30830	COG0772	Belongs to the SEDS family
F1C79_RS30890	COG0494	nUDIX hydrolase
F1C79_RS30895	COG2096	Adenosyltransferase
F1C79_RS30910	COG0745	RESPONSE REGULATOR receiver
F1C79_RS30920	COG0668	transmembrane transport
F1C79_RS30925	COG2211	Major facilitator Superfamily
F1C79_RS30930	COG3695	enzyme binding
F1C79_RS30940	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS30945	COG0748	coenzyme F420 binding
F1C79_RS30975	COG0745	RESPONSE REGULATOR receiver
F1C79_RS30980	COG0642	Histidine kinase
F1C79_RS30990	COG3642	lipopolysaccharide core region biosynthetic process
F1C79_RS31005	COG0433	COG0433 Predicted ATPase
F1C79_RS31030	COG4964	Belongs to the GSP D family
F1C79_RS31095	COG0306	phosphate transporter
F1C79_RS31120	COG1230	cation diffusion facilitator family transporter
F1C79_RS31150	COG0583	DNA-binding transcription factor activity
F1C79_RS31160	COG2990	Protein conserved in bacteria
F1C79_RS31170	COG1074	ATP-dependent DNA helicase activity
F1C79_RS31175	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
F1C79_RS31190	COG0784	Response regulator, receiver
F1C79_RS31190	COG2205	protein histidine kinase activity
F1C79_RS31195	COG2197	response regulator
F1C79_RS31200	COG3121	Chaperone
F1C79_RS31215	COG3121	Chaperone
F1C79_RS31225	COG3795	YCII-related domain
F1C79_RS31245	COG4941	Belongs to the sigma-70 factor family
F1C79_RS31255	COG1028	Short-chain dehydrogenase reductase Sdr
F1C79_RS31265	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
F1C79_RS31270	COG2199	diguanylate cyclase activity
F1C79_RS31295	COG3220	belongs to the UPF0276 family
F1C79_RS31305	COG1764	response to oxidative stress
F1C79_RS31310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
F1C79_RS31320	COG2259	Doxx family
F1C79_RS31360	COG5001	Diguanylate cyclase
F1C79_RS31360	COG3706	GGDEF domain
F1C79_RS31360	COG2203	Gaf domain
F1C79_RS31360	COG4251	negative regulation of phosphorylation
F1C79_RS31390	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
F1C79_RS31620	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
F1C79_RS31660	COG4770	biotin carboxylase activity
F1C79_RS31675	COG3842	ATPase activity
F1C79_RS31680	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
F1C79_RS31700	COG2015	COG2015, Alkyl sulfatase and related hydrolases
F1C79_RS31710	COG3300	MHYT domain
F1C79_RS31710	COG5001	Diguanylate cyclase
F1C79_RS31725	COG1538	Outer membrane efflux protein
F1C79_RS31735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
F1C79_RS31740	COG2910	NAD(P)H-binding
F1C79_RS31745	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
F1C79_RS31760	COG1024	Enoyl-CoA hydratase
F1C79_RS31860	COG3086	response to oxidative stress
F1C79_RS31865	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
F1C79_RS31900	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate