        recF NONE
        gyrB    6292 ..    6311 + -12.1  -5.29782   TATCGGAAACAGAAA            CCCCGGC CTGTGT GCCGGGG             TTTTTTATGGCTGTC 100 55
JLK41_RS00075 NONE
JLK41_RS00080   18176 ..   18189 +  -4.5  -2.80816   CGACCTGCAGCAACG               GGTTC GGAC GAGCC                TGTACTGACTGCACG  43 4
JLK41_RS00085   19173 ..   19189 + -13.7  -5.24531   AGGATTGTCGAAGAA              GGCGCCA TGA TGGCGCC              TTTTTTCTGCCACCT 100 57
JLK41_RS00090 NONE
        mprF NONE
JLK41_RS00100   23718 ..   23730 +  -6.9  -3.18264   TGCCGAACAGCTCCT                CGGGG GTG CCCTG                TTCGTGGATGCGGCC  52 200
JLK41_RS00125   28495 ..   28553 + -13.9  -2.55015   AAATCCGGGAACGTA GGGTGGACGTCGCTTTTCACG-TCCACCG CAA CGGTGGATCG-GTGAAGCGTGATCCACCC TACGTTCACTGGCGT  72 177
        eutB NONE
        eutC NONE
        doeA NONE
        doeB   33344 ..   33378 + -14.2  -3.53012   CCTGTCGCGGCTAAA     GCCCCTCCCACAGACT TAC GGATCGTGGGAGGGGC     TTTAGCCGCGACCGG  86 41
JLK41_RS00150   34096 ..   34114 +  -3.9  -4.24948   CACCTTGCGGTTGAG            CACC-TCA TCCA TGATGGTG             TTTTCCATCTCCTGG  65 210
JLK41_RS00160   35729 ..   35764 +  -3.1  -3.05463   CAACGCGCTAGAATG    CGCGCCGCTCGTGGCC ATGTC GGCTGCG-GCAGTGGG    TTCCCTCACCCCACT  43 99
JLK41_RS00165   36519 ..   36564 + -10.7  -3.65812   AGGGACTTTAGCCGC GATTGTCTGAGTGCCGCTGCCG AGGCG CGGCGG-GGC-CTCAGA-AATC TTCTGTTCGCCGCGC  73 94
JLK41_RS00170 NONE
JLK41_RS00175   40086 ..   40126 +  -9.5  -3.36803   GCGCGGCGTCGCCGC  CGTCCAGGTGCGCCTTGCC CAG GCCGAAGCGCAGCAGGGCG  TTGTCCATGCCCTTG  63 464
JLK41_RS00205   45640 ..   45668 + -16.8  -3.88787   CAACCCGTAACACCC       G-ACGAGCCCCGC TGAT GCGGGGCTCGTGC        TTTCTACCGGTGTCG 100 31
        dprA   46980 ..   46992 +  -4.7  -3.96148   GCGCTTGCAGAAGGC                GCCGG CGG CCCGC                TTTGTCGTGGCGCAG  59 169
JLK41_RS00215   48137 ..   48168 + -12.2  -2.57211   CTGTAGTCGATGGTC      GCC-CAGGCGCCCTG CTC CCGGGCGCGTGCGGC      CTTCTGCGCCGAGCT  64 506
        hemF   49904 ..   49919 +  -3.3  -4.18018   CGCCAGCAAGCTGGC              TCCTA CACAGA TAGGA               TTTTCCATGGACCGC  62 164
        aroE NONE
JLK41_RS00235   51228 ..   51259 + -11.6  -2.52516   CGCCTGGCGTAGCAC      CAGGCTGCGCTGCAG GGC CTGCAG-GCGGCGTG      CTTCCTGATGCAGCA  61 145
JLK41_RS00255   56476 ..   56492 +    -5  -3.21099   CCTATACTGGTTGTT              GCCGCC ATCTC GTCGGC              TTCCTCATACAACCG  48 73
        pbpG   57441 ..   57461 + -16.9  -4.93968   TTTGGCGGGACAAGG            GGGCGACTC GCT GAGTCGCCC            TTTTTCATTGTGCCT 100 44
        dkgB   59622 ..   59632 +  -3.2  -3.68222   GCTCGAGGTATTGCT                 TGTC GAA GACG                 TTGTTGAGGTTGGCG  53 194
JLK41_RS00295   65385 ..   65406 +  -4.3  -3.13403   TGATCAGCGAGGGCG           GTGCCGGCA GCGC TGCCTGCAA            TCTTGCTGAAAGAGC  48 78
JLK41_RS00300 NONE
JLK41_RS00305   66597 ..   66624 + -12.6  -3.73068   GTGCCAGAGAAAAAA        GCCGCCGACGGA TCGC TCCGCCAGCGGC         TTCTTCACTTGCCGG  85 116
JLK41_RS00320 NONE
JLK41_RS00325 NONE
JLK41_RS00330   71278 ..   71300 +  -7.6  -3.80014   AATTTTTTCTGCAGG           CGGCTGCAAG ATC CTGGCGGCTG           TTTCGTCGTGGGTAT  67 48
JLK41_RS00335   73838 ..   73858 +  -8.4   -3.7948   GCGTGTCGGGATGGA            TGACAATG CGATT CATTGTCA            TTTGATCCGTATTCG  67 104
JLK41_RS00340 NONE
JLK41_RS00345   75331 ..   75341 +  -4.6  -3.55444   CGCGTGGCGCCTGAG                 CGGT GCA GCCG                 TTTCGCGGCTGAAGC  52 27
JLK41_RS00350   78618 ..   78631 +  -3.7  -2.91728   CGTGAAGGCGGGTGC               CGCGC CTGC GAGCG                TCTAGTCTTCAGCGT  42 101
JLK41_RS00355   79328 ..   79378 +    -9  -3.12847   GGTGCCGGGGCGCAG TACCAGCTGGCGCAGCTGCGGATG TTCGC CA-CGGCAGC-GCGCCAGCAGCTG TTCGATCTCCAGCTT  59 462
JLK41_RS00365   80875 ..   80887 +  -6.2  -3.14344   GGCGCGTGCGGCGCC                GCCG GAGAA CGGC                TTGATCAGCGCGGTC  51 266
JLK41_RS00390   83608 ..   83626 + -13.1  -4.93877   CAGCTACAACGAAAA             CGCCGGC GACAA GCCGGCG             TTTTGTTTGCTGCCG 100 65
JLK41_RS00400 NONE
JLK41_RS00405   86929 ..   86949 +   -14  -4.91873   CTTGCAGTGAGCAGA            CGCCCGTC CCTGT GACGGGCG            TTTTTGCTTCCTGTG 100 48
JLK41_RS00410   88368 ..   88383 +    -6  -3.05384   GCAGCGTCCACGGCA              CCAGGC GCTC GCCAGG               TTCCATGGCCAGGGC  49 479
        adhP   93482 ..   93515 +  -9.6  -2.73364   CAGGGCATAAGCCTG    GCGC-TG-GCGCCGTC GGCT GACGGCACGCAGGCGC     TGGTTCAGGTGCGCG  57 254
JLK41_RS00455   94999 ..   95016 +  -7.7  -2.54896   TTCCGCGCATAGCGC             GCCGAGCC ACA GG-TCGGC             TCGATTCCGTAGGAG  52 29
JLK41_RS00460 NONE
JLK41_RS00465   97504 ..   97526 + -14.9  -2.78463   GAAGGCACTCCCGCA           GAGCGCACG CATTC CGTGCGCTC           TGTCGTGCCGGACGT  77 47
JLK41_RS00475   98573 ..   98600 +  -6.2  -3.01712   CAGGGCGCAGCGGTA        CAGGCGGATTTC CAGG GGGATCTGCCAG         TGTTCGCCACCGCAG  49 136
JLK41_RS00485  101045 ..  101072 +   -17  -4.55295   TCGACCGGCAACATA        GGCGCCGCACTC ATTC GAGTGCGGCGCG         TTTCTTTCTGCCCCG 100 42
JLK41_RS00490  102488 ..  102507 + -13.6  -5.47218   CAGCCTCACCCTTCA            GGGATGGC CCAG GCCATCCC             TTTTTTTGCCTGCGA 100 100
JLK41_RS00500 NONE
JLK41_RS00505 NONE
JLK41_RS00510  106197 ..  106233 + -10.8  -3.18681   GACCACGCGGGTGCA   GGCCGGCGTGCGCCGGT CACC GCTGGAG-ACGCCGGTC    TTGATGCCGTTGAGG  64 192
JLK41_RS00520  108470 ..  108484 + -12.8  -5.45726   TTGATCCGGAAAAAA               GGGGGC GAG GCCCCC               TTTTTTTGGCCTGTC 100 42
JLK41_RS00525 NONE
JLK41_RS00530  110213 ..  110227 +  -2.8  -3.28712   TCGGTGAGGAAGGCG               CGTG CCGAAAC CACG               TTCTCCAGGCCCAGG  46 193
JLK41_RS00545  112959 ..  112969 +  -6.8  -3.01712   GGTGGGCGATGTAGC                 GGTC GTT GACC                 TCTTCCACCAGGCGA  51 287
        coxB NONE
        ctaD NONE
JLK41_RS00565 NONE
JLK41_RS00570  118091 ..  118109 +  -4.4  -3.27298   GGGCCAGGGCGCCGA             GGACACGG GAA CCATGGCC             TTCGTCCTTGACCAG  49 191
JLK41_RS00580 NONE
JLK41_RS00585 NONE
JLK41_RS00590 NONE
JLK41_RS00595 NONE
JLK41_RS00600 NONE
        polA  126937 ..  126971 +  -4.3  -5.81412   GGTTCAGACCTTGAA     CCCCGAACTTC TCCCTCCCCATAC GAAGCTCGGGG     TTTTTTTTGCCTGAA 100 246
JLK41_RS00625 NONE
JLK41_RS00630  129033 ..  129050 + -10.5  -5.06414   ACTTGGTAAGACAAA             GGGTGGC TGCG GCCGCCC              TTTTTATTGGGCGCG 100 55
JLK41_RS00635 NONE
JLK41_RS00640 NONE
JLK41_RS00645  132620 ..  132633 +  -2.4  -3.42996   TCGCGCGTGCGTCCC               GCTA GGACGG TAGC                TTCTCCTCGCTCCTG  47 63
JLK41_RS00655 NONE
JLK41_RS00660  136017 ..  136032 +  -7.5  -2.80816   CGCGCGTAGGCCTCG              CGCCC GCTGCA GGGCG               TCTCGTCACTGCCCG  52 282
JLK41_RS00675  140287 ..  140306 +    -5  -2.80816   CCTGATCCGCGTGTG            GATGC-CCA AGC TGGAGCGTC            TCTGATGCCTGACGA  43 1
JLK41_RS00680 NONE
JLK41_RS00685 NONE
JLK41_RS00690  142911 ..  142925 +   -10  -2.87136   CGCGTCGCGGCTGAT               CGTGCA TTT TGCACG               TGTCGTACTTCGTGC  62 27
JLK41_RS00695  143366 ..  143376 +  -4.6  -3.63744   GCGCCCTGCCAGCAG                 CCCG CGC TGGG                 TATTTTGAGCGACAG  54 7
JLK41_RS00700  143700 ..  143715 +  -6.8  -4.25104   GGAGCCAAAGCTGTT              CGCACGC AGT GCG-GCG              TTTTCGTCACACCGG  71 138
JLK41_RS00715 NONE
JLK41_RS00720  148449 ..  148475 + -25.2  -4.44548   CAGCGTCAGCCCCGA         GCCCCCGCACGC CTT GCGTGCGGGGGC         TTTTCATTGGCTGTC 100 45
JLK41_RS00725  149691 ..  149717 + -20.2  -3.24925   CTGATGGTCGGAAGA         GCCCGCCACTCG ATT CGAGTGGTGGGC         TTCGTCATGTCAGGT  95 78
JLK41_RS00730 NONE
        pstA  153956 ..  154010 +  -5.6  -3.32963   GATCATTAAATTCGA GCCGCAAGCCCCGAGCCGCAAGCTTC AACGA GAAGC--GCGGCGACCGGCTTGCAGC TTGTAGCGTGCAGCT  52 32
JLK41_RS00740  154969 ..  154983 +  -4.2  -3.14132   CTTGCAGCTTGAAGC               TTTCGC GGA GCGAAC               TTGATGAACAAAGAC  48 109
        phoU  155726 ..  155756 + -16.9  -3.60074   GATGCCTGCGTCGAG      C-CAGCGGCCCGGG ACTT CCCGGGCCGTTGCG       TTTGCGCGATTTGTC 100 39
JLK41_RS00750  156784 ..  156824 + -10.4  -3.14931   CCACATGGCACCGGA GCGACCGGC-GGCGGTGAG CCGG TTCACAGCCTGACGGTTGC  TTCCTCGCGCATGCC  65 54
JLK41_RS00755  158131 ..  158160 +  -8.7  -2.71144   TTCACCTGGCGGTTG       GCTCAAGTCCTTGA ATA TCAACGACTTG-GC       TGGTTGGCACCGCTA  57 361
        fliD NONE
        fliS NONE
JLK41_RS00770 NONE
JLK41_RS00775 NONE
JLK41_RS00780 NONE
JLK41_RS00785 NONE
        motA NONE
JLK41_RS00795  164796 ..  164820 +  -6.3  -2.82933   CCGCTGATGCCGAGT          TGCCTGCAGCG GCT CATGGCAGGCA          TCTGCTCAGTTGGGC  48 485
        glcC  177111 ..  177129 +  -6.7  -3.66178   CGGCTGACCCACCCC            GCAGC-CG TTCG CGAGCTGC             TTTCGACTTGCCGCC  60 145
        flgB NONE
        flgC NONE
        flgD  179499 ..  179515 + -12.3  -2.82193   CGAATTCGGCCAGAC              GCAGACC GCC GGTCTGC              TCTGATCCCTCTCAT  69 4
        flgE NONE
JLK41_RS00880 NONE
        flgG NONE
        flgH NONE
JLK41_RS00895 NONE
JLK41_RS00900 NONE
        flgK  186640 ..  186655 +  -4.6  -3.85698   TCGACGACATGCTTT              CCGCGT TCTG ACGCGC               TTTCTGGAGAGACCC  59 15
        flgL NONE
JLK41_RS00915  188905 ..  188924 + -10.6  -2.58699   GGGTTCAACCCGTTA            CCGCAGGC AGTC GCCCGCGG             TGCATTGCCTTGTTC  60 297
JLK41_RS00920  189758 ..  189787 + -22.3  -4.48221   CTCGCCTGCTACAAA       CAACAAGGGCCGC GAAT GCGGCCCTTGTTG        TTTTCTGCATTACTG 100 43
JLK41_RS00945  200115 ..  200139 +  -7.2  -3.08679   GCGCTCCTAATGTGC          CTCCACGA CAGCGGAAC TCGTGGAG          TCTTCAATGACAACA  52 100
        mdcA NONE
JLK41_RS00955 NONE
JLK41_RS00960 NONE
JLK41_RS00965 NONE
        mdcE NONE
JLK41_RS00975 NONE
        mdcH  206267 ..  206281 +  -3.5  -3.53012   GAGGTAAGCCTCGAC               CGCTG AGCCG TAGCG               TTTACCGAAGCACAA  49 20
        madL NONE
        madM  207513 ..  207531 + -13.8  -5.24129   CTGGGCTGACCTTTC             GCCCGCCG TCA TGGCGGGC             TTTTTTATGGCCCCG 100 32
JLK41_RS01000 NONE
JLK41_RS01005  210627 ..  210639 +  -3.3  -3.64205   CAGCGCTTTCAGGTT                CACGG ATG CCGTA                TTGATCTTTTTCTCG  53 464
JLK41_RS01015  211733 ..  211746 +  -4.5   -4.3739   ACGTTTATGGGGGAA               GTCTC GTCA GAGGC                TTTTGTCGAGCAGTA  68 411
JLK41_RS01020 NONE
JLK41_RS01025 NONE
JLK41_RS01030 NONE
JLK41_RS01035 NONE
JLK41_RS01040 NONE
        pelF NONE
        pelG  223976 ..  223999 +  -8.1  -3.23638   GAGGGCCGGCGCGCC          CTTCGCTGC CGCGCT GCAGCGACG           TTCCTCCATATTTCG  57 75
JLK41_RS01055  225923 ..  225944 + -15.9  -4.53034   GGCGGAAACGAAAAA           GCCCCAGGT TTTC ACCTGGGGC            TTTTCATTATCTGGC 100 146
        gabD  227883 ..  227901 +    -6  -3.08679   GCGCGCGGCGCCCCC             GGTTGTAC CGA GTAGAACC             TGTTGCGTCCCCGCC  49 85
        gabT  229344 ..  229362 + -11.7  -5.42259   GCCGGGCGCCCCTGA             GACCCGC CTTGT GCGGGTC             TTTTTTTGCCGGTAC 100 77
JLK41_RS01080  231738 ..  231765 + -20.6  -3.81488   GCGCTCTGAAACCTG        CGGCCGGGCTCC CTGC GGAGTCCGGCCG         TTGTCTTTGCAACGG 100 213
JLK41_RS01085  233057 ..  233106 +  -8.4  -2.71144   ACTCGCTGATGGTCG CGCCGATCTGCCGCACCGCCGCC TCGAT GGCCTCGCTG-GGTGGTTCGGCG TAGTTCAGGCGGATG  52 127
JLK41_RS01095  234857 ..  234876 +  -7.8  -3.35046   AGCTGTAGCCCGACC            GCCGCTGT GCTT ACAGCAGC             TCTTTCAGGCGGTGC  59 33
JLK41_RS01105  236878 ..  236899 +  -6.5  -3.21099   GGTCCCTGGCGTACG           CTGCGCTGCG CGT CGCCG-GCAG           TTAATGCTCGGCCAG  54 221
JLK41_RS01115  238561 ..  238581 + -14.7  -2.75074   CGTCGCTCCCGTCGC            CTGCGGGGC CCT GTCCCGCAG            TGCTATTCCGGTACG  77 60
        dadA NONE
JLK41_RS01130  240956 ..  240973 +  -9.8  -5.75342   TGTGTTGGCTTTTCA             CCCGGC TCCCCT GCCGGG              TTTTTTTTGCGACCG 100 66
         alr NONE
JLK41_RS01140 NONE
JLK41_RS01145  243442 ..  243456 +  -9.2  -5.42514   TCTTCCATGAAAAAA               CCGCCT TCA GGGCGG               TTTTTTCGTTTCTGC 100 49
JLK41_RS01150  245789 ..  245799 +  -5.4  -3.92075   AGCAGGTTGCGGCCT                 TCCT GGA AGGA                 TTTCTCGATGACGAT  63 116
JLK41_RS01165  250411 ..  250426 +  -2.4  -4.13767   CCAACCGTGCAGGGT              CGCTGC AGCC GCGCCG               TTTTCCACTGGAAGC  58 71
JLK41_RS01175 NONE
JLK41_RS01180  255101 ..  255114 +  -5.9  -3.53811   CAGGGACAGGCCCAG               GCGCT CGCA GGCGC                TTTCCAGCCACTGGC  56 165
        glnK  257599 ..  257611 +  -9.1  -4.47328   CTGCGAACTTTCGCA                GGGCT AGG AGCCC                TTTTGTCCTCGAATT  84 83
JLK41_RS01200  259147 ..  259171 + -12.2  -5.24129   CGTCGATGGAAATGA         C-AAGGGCGCC TTTT GGCGCCCTTTG          TTTTTTCTGGCAGCA 100 42
JLK41_RS01205  259629 ..  259649 +  -3.1  -4.05875   CTCGGCGACTGGTGG            CGACCCTGC ACG GCGAGGTCA            TTTGAATTTTTTCCG  59 0
JLK41_RS01210  260076 ..  260090 +  -8.5  -5.24129   CTGCGTAACAGGAAA               CCGCC CTCGT GGCGG               TTTTTTGTGCCCGGC 100 46
JLK41_RS01245  265915 ..  265940 +  -5.5  -4.24338   GTCGCCACCTTTGCG         CCT-AGGCTG GCTGTTG CAGCCTGAGG         TTTTCGCCTATTTTT  68 21
        cyaY NONE
JLK41_RS01255  266559 ..  266589 + -11.9  -5.26316   TCGACCAGACAGTCA      GCTTAAACCCCGCC TTCG GGCGGGGTTTT-GC       TTTTTTATGGCCTAC 100 78
         rnk NONE
JLK41_RS01265  268392 ..  268405 +  -5.9  -3.44051   GGAACGGCAGGCGCC               TGCGC CATA GCGCG                TTGTGCTCGTCGAGC  55 525
JLK41_RS01315 NONE
JLK41_RS01320  278019 ..  278067 +  -2.3  -3.50853   TCGCTGTAGCGGGCG CCGGCTGCGGCCGATGGCCGCCT CCTCC AGCCGG-CACTGGGCG-AGCCTG TTATGATTCGCGGCA  47 32
        hemC NONE
JLK41_RS01330 NONE
JLK41_RS01335  280934 ..  280978 +  -4.2  -3.14051   CGTCGGCAGGGGGCC GCAGCGGCCGGG-GAGGCG CAATGAAA CGCCTGATCTGGCTCCTGC TGTTGCTGGCCGTCG  48 2
JLK41_RS01340  282286 ..  282305 +   -15  -2.69601   CTGCCGCGTGTTGCC            GGGCGCCT TGAA AGGCGCCC             TCGCTTTCCTCTACC  77 110
JLK41_RS01345  282836 ..  282851 +  -2.6  -3.13403   CTGCAGCTTCTGCGT              CGCGATT GAG AAT-GCG              TATTGCTGCAGGCCG  43 17
JLK41_RS01350 NONE
JLK41_RS01355  284054 ..  284085 +  -7.2  -3.23216   GCTTCGATAGCCTTG      GCATGGCGTTGCGGC GAG GCCGCGATGC-GCGC      TTCGTGCTCATCGAG  54 456
JLK41_RS01365  285500 ..  285527 + -19.8  -2.82933   TAAGGCTGAGCCATG        GCGCCGCGCAGC ACAT GCAGCGCGGCGC         TGTCCTGCCTTCCCA  88 38
JLK41_RS01375 NONE
JLK41_RS01380  288431 ..  288473 +  -2.7  -4.11216   CCCGCTGGTCTGGGC GCTGGCG-CAGGAGTAGG CTGTAGCT CCTTCTCCTGATTTCAGC TTTTCGAGGTACGCA  57 41
JLK41_RS01385  289137 ..  289161 +  -4.2  -4.16284   GAAGCCCATGCCCGG         CCGCCTGCG-GG CGG CCACTC-GGCGG         TTTGTTACCAAATAT  65 39
JLK41_RS01390  291159 ..  291180 + -12.3  -3.68529   GGACGCGGCGTGAAC           GAGGGCG-GC TTT GCTCGCCCTC           TTTGCCTCATAGCGT  82 43
JLK41_RS01395 NONE
JLK41_RS01400  292116 ..  292134 + -10.2  -3.41602   GTCGTCACGGATTGC             CCCCGGCT ACG AGCCAGGG             TTCTCCTGGCCTAGC  68 40
JLK41_RS01415 NONE
        hemB NONE
        ppk1  298803 ..  298849 +  -9.3  -2.72661   CGTAGGCCTCTCGCC GCGCCGGGCGCGGCT-TGGCGG GTGA TCGCTACAGTCGCGCGCGGACC TGCTTGGGGCTGATG  57 82
JLK41_RS01440  302240 ..  302267 +  -5.5  -3.83205   ACGTGAGCTCACGTA        CGGTGGTCG ACGCTTCACC CGTCCACCG         TTTGCTGTACGCGAT  60 94
JLK41_RS01445 NONE
JLK41_RS01450  304152 ..  304166 +  -7.8  -2.78384   GCACCTCGGGCATGC               TCTGGG AGC CCCGGA               TGTGGTGGAAGAGAA  51 244
JLK41_RS01490  310599 ..  310609 +  -8.2  -3.02511   GGGGATTGAGGCTTA                 CCCC ACG GGGG                 TATTGAAAGGCTCAA  56 32
        trxA  311084 ..  311100 + -10.8  -5.25735   GCTGCCTGATGAAGA              CCCCGC TTTTT GCGGGG              TTTTTCATTTTTTGG 100 81
         rho  312574 ..  312591 + -14.1  -3.49777   TGCGCTGTGCCACGA             GGCCGGG GAAA CCCGGCC              TTGTCGTATCTGGAG  86 46
        ubiD NONE
JLK41_RS01510  315303 ..  315314 +  -3.6  -4.56775   AATGAACAGCACTGC                GCTG GGGC CGGC                 TTTTTCAGGGGGCAT  68 208
        fliL NONE
JLK41_RS01570 NONE
        pepP NONE
        ubiH  329416 ..  329444 + -10.2   -3.5627   TGCGCACCATGGATT        CCGAGTGGTGCG CAGCA CGCACCCCTGGG        TTTAAGGAATGATAT  73 77
JLK41_RS01585  330657 ..  330684 +  -7.6  -3.76224   TTCCGGTGACCTGCC        GGAGCTGGC-CAG AGC CTGAGCCCGCCCC        TTTCATGGATGAACG  67 7
JLK41_RS01590 NONE
JLK41_RS01595  332239 ..  332264 + -17.6  -2.94144   GCTGCCGTTATACTG         CGACGCCCCG CCTTGC CGGGGCGTCG          TCCTTTCCGTCGCCG  85 147
JLK41_RS01600  333945 ..  333960 +  -4.6  -3.74693   CGTTGTACGGCGGCG              GCTCGC CTGC GCGACC               TTTGGTCAGATGACC  57 64
        gcvT  335223 ..  335262 +  -3.3  -2.61548   CCCTTATCTGAATCA  TCAGGTCGCGGCGTTGG CTGTCC CTCTCGCCACGGCCTGC   TAAATTGTCCTGACG  40 30
        gcvH  335724 ..  335737 +  -9.5   -5.4833   TTCCTAGACAGAAAA               CCCGC TTCG GCGGG                TTTTTTGTTGCCTGC 100 47
JLK41_RS01615 NONE
JLK41_RS01620  336590 ..  336600 +  -3.2  -2.79952   TGCTGGGGGGCTGAG                 CATG CGT CGTG                 TCATTGCGTTCGTCT  41 27
JLK41_RS01625 NONE
JLK41_RS01630  337683 ..  337695 +  -6.9  -3.53012   AGCTGGCGGCCCTTG                GCGTC GCG GGCGC                TTTCCAGCACGCGCA  58 494
JLK41_RS01660  345126 ..  345181 + -10.5  -2.71712   GACGATGCAGAGCCG CTGATGGCTCGGTGGCAGGCGTT-TCG TTCG CGACGGCGCCTGCCAC-GATTCAACGG ATTTCCGCGGGCCGC  61 39
JLK41_RS01665  346578 ..  346621 +  -4.8  -3.30124   AGTGCCTGGATCTGA CTTTGCGTGACCTGTCGGTCT GAAAA AG-CCG-CAG-TCACGGAAAG TTGTCAGCGGTGCCA  49 3
JLK41_RS01670 NONE
JLK41_RS01675 NONE
JLK41_RS01680  350151 ..  350179 +  -5.8  -3.03903   GGGTCAGTAATCGTT        TCCAGCCCGGCC GCAGG GGCCGGGCACAA        TCTTCCGGGAGTTTT  49 31
        potA NONE
JLK41_RS01690 NONE
JLK41_RS01695  353168 ..  353185 + -14.1  -4.72272   TACTGAAATGAAAAA             CGGGCCC TTCG GGGCCCG              TTTTTCGTGGGGAGC 100 47
JLK41_RS01705  355406 ..  355424 + -11.7  -3.06265   CGACTGGAACAACTG             CTGGCGC GCTAA GCGCCAG             TGTCCTTTCTGGGAT  68 14
JLK41_RS01710  356711 ..  356738 +  -8.3  -3.61103   TCCTGCGCGGGCTGT        TCGGCGGCGTC TGATTC GGCGCCGGCGG         TTTCCCCTGAGGTTG  64 12
        argE NONE
        argA  359615 ..  359653 +  -7.3   -4.2717   TACCCGGCAATGCTA  GCT-GGCCGGGCGGCCTGC AGT GT-GGCCGCCCATCCCGGC  TTTTGCTCCGCTGGT  71 315
        ompR  365091 ..  365116 +  -3.1  -3.03124   GGGCGGCTTCTTCTT         GCGGCTTGC AGCTTGAG GCTTGCCGC          TCTTGAAGACTCCCG  43 83
JLK41_RS01750  366444 ..  366494 + -13.2   -2.8655   GTAGCTGAGCGGCCT GCCCCGCGGCGGCGTGC-TGGCA ATACGC TGCCAAGCGCTCTGGCGCTGGGC TATGCTGTGCCTGCG  75 37
JLK41_RS01755  370352 ..  370402 +   -11  -3.08996   GGGAAGTTGCTGTCG CCGTGC-CCGCTGGGCAGCTCGC CGTAGA GCGCGATGCCCAGCGGCGTCAGG TATTCGCTGAAGATC  64 82
JLK41_RS01775  373483 ..  373495 +  -2.6  -3.28712   GGAACATCTCGGTCA                GGCG CGCAC TGCC                TTCTACGGCCAGCGA  44 415
        hslO NONE
JLK41_RS01790  376680 ..  376726 +  -2.2  -2.61548   GTCAGCGACGCCATC AAGAGCGCCGGCCCGCAGCTGT AAATC GCAGCTGCGG-C-GGTACCCTA TACGTTGTAATAGCC  38 2
JLK41_RS01795  378266 ..  378291 + -10.4   -3.2218   CCGCGCAGCAACTGC         GGCGTGCGTT CGCTCC AGCGCGCGCC          TTGGTAGGTGTTGAC  63 377
JLK41_RS01820  383028 ..  383056 +  -3.7  -3.09844   ATGCACGATCGCGCC        GCTGACAGCCCTG GCA CAGGGCTACTACC        ATTTTGCGATATGCG  43 76
JLK41_RS01825  383301 ..  383339 +  -6.7   -4.8622   CCTGAGCAGGTTTCC  CGACCGCTGCGCCC CCCATCCCGCCT TGGCGCAGCGG-CG   TTTTTGGTTACCGGA  85 36
JLK41_RS01830 NONE
JLK41_RS01835  385727 ..  385757 +  -6.8  -2.66964   GGGTGAGCGGCAATA      GCGCGGTGTGCTG ATCAAC CGGC-CACCGCGA       TGATCTCCTCGATCA  49 25
JLK41_RS01845 NONE
JLK41_RS01850  389739 ..  389756 +  -3.3  -3.28712   TGCCTGATGGCCATG             GCCGAGG AGAG CTTCGCC              TTCTGACCGAGCGAC  47 2
JLK41_RS01855 NONE
JLK41_RS01860  391543 ..  391563 +  -2.6  -3.33162   ATGCTGCTTTCACCG           CTACCTTGC CGGC GTA-GGTAG            TTCTGCGATGGCCTG  44 105
JLK41_RS01865 NONE
JLK41_RS01870  393693 ..  393740 +  -9.6  -3.01791   GGCGATCGGCGCCGA CC-ATGCTGCCGGCGGCGCCGCC CAG GCCAGCGCCCACGGCGGCACCGG TGTTGCCACCGACCT  57 276
        lysM  398921 ..  398937 +    -8  -3.35813   TCCTGGCGCAGGGCG              GACCAG AACTG CTGGTC              TTCCTTGGGATAGCC  59 290
        nudE NONE
        cysQ  400959 ..  400996 + -11.1  -2.98823   GGCGATGCGTTGCGA   CGTCGGGGAGTCGCGGC TGAA GCCGCTCCTACCTGGCG    TGTCTCTGGCGGGGA  68 93
        pilG  409814 ..  409843 +  -7.1  -3.68024   TAGAACAAGCCTCCT       GACGTGT-CGGCCT GCA GGGCCGTACGCCTC       TTCTGTATTGGGAAA  60 24
        pilH NONE
JLK41_RS01965  410823 ..  410841 +  -9.5   -3.6715   AACAGAAATTCGGTT             GGGTCGG TTCTT CCGGCCC             TTTGGCGTTACATGG  68 39
JLK41_RS01970 NONE
JLK41_RS01975 NONE
JLK41_RS01980 NONE
JLK41_RS01985 NONE
JLK41_RS01990  422732 ..  422752 + -15.4   -4.7373   GGCCCCAACGAAAAA            GCCCCGGC ACATG GCCGGGGC            TTTTTCATGCCGTCA 100 62
JLK41_RS02010 NONE
JLK41_RS02015  428231 ..  428262 +   -21  -3.18264   GCCTTTTCCCCTAAA      CGAAAACGCCGCCC TCAG GGGCGGCGTTTTTG       TTGCTGCGTCGGCGC 100 129
JLK41_RS02045  435723 ..  435751 + -21.1  -2.71268   AGTTCGGCGGAAATT        CTCTCCGGCAGGC CAT GCCTGCTGGAGAG        TGATCTATGCTCCAG 100 71
JLK41_RS02050 NONE
JLK41_RS02055  438338 ..  438361 + -10.2  -3.53091   CTGGATGACCTGACG          CTTGGCGGCG CAGT CGCCGTCGGG           TTTGGCGGCCAGGAT  67 316
JLK41_RS02080  443174 ..  443189 +  -3.2  -4.65895   CGCGGGGTGCGGCTG              GGCG AAAATAAC CGCC               TTTTTCCGTGAACAG  70 73
         tkt NONE
         epd NONE
JLK41_RS02095  447625 ..  447661 +  -6.5  -3.37464   GGATGAAAGGCGAAT   CCCGTTTCTGCTCCGG TTAAAC CCTGGGC-GAATCGGG    TTGTCCGATTCCTCG  56 70
JLK41_RS02100  447869 ..  447880 +  -2.2  -2.70932   CAATGGTGGAATGCC                CAGC CAGC GTTG                 TGATTGAGGAGGGCG  39 7
JLK41_RS02105  448209 ..  448245 + -10.7  -2.62184   GGTCGCGGCTGCAAG    CCGCGCTGAGTAGCGAG AAC TTTGCAACACCGCGCGG    TCATCTCGCCGCGCG  60 17
         fba  449503 ..  449533 +   -22  -4.05788   GGCTCTGATCCCAAA       CACCCCGCAAAGGC GAA GCTTTTGCGGGGTG       TTTCATTTCGAGGGG 100 99
JLK41_RS02130 NONE
JLK41_RS02135  454160 ..  454174 +  -2.7  -2.71364   CCAGGCCGATGCAAC               GGGCG GCCTA CGCCA               TAATTCGGGCACTGC  39 46
JLK41_RS02140 NONE
JLK41_RS02145 NONE
JLK41_RS02150  456375 ..  456387 +  -6.2  -3.03771   CTGATCGACTACCTC                CGCC CAGTC GGCG                TCTTCGAGGATCTCC  49 73
JLK41_RS02170  458702 ..  458719 + -12.7  -2.52464   TACGGCTATCGCCTT             GAGCGGG TTGA CCCGCTC              TGAGTTCGACCGACG  68 5
JLK41_RS02175  459629 ..  459652 + -13.9  -3.20164   AAAGGCTCTGTCACC          CTCCAGCGC CTGCCT GCGCTGGAG           TTGGGTTGCGTGTAG  78 39
JLK41_RS02180 NONE
JLK41_RS02185 NONE
JLK41_RS02190  464056 ..  464074 +  -6.6  -2.58714   ATTATCATTGGTTGG             CGCTGTTG ATG CTACGGCG             TGCGTTGCTATCGGC  49 121
JLK41_RS02195  465230 ..  465244 +  -4.2  -3.54424   GAAGGCATGGCCGTG               CTGGTC GTT GATCGG               TTTGAAGCCATCCAG  51 375
JLK41_RS02210  469635 ..  469668 +  -3.8  -3.68366   TGGCGAGCTTGAACA     GCGTATGAAGACGCC TGTGC GGGG-CTTCGTTCGC     TTAATTTTGGACTGA  51 18
JLK41_RS02215 NONE
JLK41_RS02220  471108 ..  471136 + -12.3  -2.87564   GCTGTACCGGCGAAC        CCGAGTGCCGGGC CTC GTCCGGCACGCGC        TGTCTGGCCGGCTGG  70 46
         ald  472470 ..  472480 +  -3.2  -2.87881   AGCTCTAGCCGCAGG                 GGAT GTC GTCC                 TGTATCACGCCGTTC  42 33
JLK41_RS02230  473579 ..  473592 +  -3.7   -3.7282   TCGGGCACATCACGG               CGGCG GTAG CGGCG                TTGTTCATGAAGTCC  54 278
JLK41_RS02245  477330 ..  477340 +  -8.2  -3.40403   ACGCCGCGACGTTTC                 GCCG CCA CGGC                 TTCTGATCAGGCCAG  59 9
        torT  482892 ..  482934 +  -5.5  -3.58343   TCGACCACCGCCATG TCGTCCT-CGCCCATCTTGC ACGA GCAGGACGGGTGGAAGGCGG TTTCCGCGTGCTCGC  54 264
JLK41_RS02310  494724 ..  494742 + -17.4  -5.42259   CGCGGCAAAGAAAAA             GGGGCGCC AGT GGCGCCCC             TTTTTTTGCCCCTCC 100 44
JLK41_RS02350 NONE
JLK41_RS02355  505656 ..  505672 +  -2.1  -2.70932   CTCAAGACCTCGGAG              GCAGAAC AAT GATCAGC              TACTTCGACCCCGCC  39 14
        fdhF NONE
JLK41_RS02365  508775 ..  508798 +  -8.8  -2.74012   ACCCCGCTCAGGCGT          GGGACGGGTG CTCG TGCCTGTCCC           TGCTTGGCGTGCTGC  57 42
        choX NONE
JLK41_RS02380 NONE
JLK41_RS02385 NONE
JLK41_RS02390  513500 ..  513515 + -11.8  -2.92513   GCGGGTCATCGGCCT              GCGCCG CTGA CGGCGC               TCTACTTCGGCTTGT  66 16
JLK41_RS02400 NONE
JLK41_RS02405  519219 ..  519236 +  -6.9  -4.19472   CGGAGGGCGAACAAA             GCGCTGC TGCG GCAGGGC              TTTTGCAGTATCTTA  71 48
JLK41_RS02410 NONE
JLK41_RS02415 NONE
JLK41_RS02420  522726 ..  522742 +  -2.1  -3.89346   GAAGAGGCCTTCCTG              CGGGAAC CTG GCTCGCG              TTTCTGAACTCCAAG  54 2
JLK41_RS02425 NONE
JLK41_RS02430  523835 ..  523857 +  -2.6  -3.78934   CGATCCAGCTGGTTT           CGCCGAGG GCGATCA CCTTGACG           TTCTTGTGGCGCAGG  54 233
         pip NONE
         dtd  525695 ..  525707 +  -6.9  -3.53012   CTCCTGGATCTGTGA                GGGCT GCG GGCCC                TTTCAGGACACCCGC  58 26
JLK41_RS02455  526957 ..  526967 +  -8.2  -3.02144   GCTGCACCGGCTGCA                 GGCC GGC GGCC                 TGTTGCAGCAGATCG  55 151
JLK41_RS02505  533258 ..  533276 +  -4.5  -2.79321   GCGGGCTTGCAGCTT             GCGGC TTGAAGTTT GCCGC             TGCTCTTAGTATGCG  43 112
JLK41_RS02510 NONE
JLK41_RS02515  534679 ..  534699 + -15.4  -3.80625   TCTCGGGATCAAGAA            CGCCCGGC CCAGT GCCGGGCG            TTTGCGTTGTGCGCC  95 44
        rpmE NONE
JLK41_RS02575 NONE
JLK41_RS02580  550208 ..  550222 +  -4.9  -3.05384   GTGGTTGAAAACGCT               GCGCT AGTGG GGCGC               TTCAATCGCGACCGA  46 19
JLK41_RS02585  551598 ..  551639 + -27.7  -2.66912   CTGATCCCCTGGATG CAGACAACAAAAAACCCGC CTAG GCGGGTTTTTTGTTGTCTG  TCGTATGCCTTCCCT 100 37
JLK41_RS02595 NONE
        pilN NONE
        pilO NONE
        pilP NONE
        pilQ NONE
        aroK  559715 ..  559751 +  -7.9  -3.39556   CTCTCGCGTCTGGAA   GCACTGT-CGCCCCGT TAAAGC GCGGGGCGAACTGCGC    TATTCTTAAGGCCTT  59 8
        aroB  560881 ..  560891 +  -5.4  -2.78018   GGCTCAGTCGTCCAA                 CTCT TGA AGAG                 TGATTCATGACCAGT  46 19
JLK41_RS02630  562637 ..  562652 +    -6  -4.24002   TTTTGCCTACGCAAA              GCTGGC GCGT GCCTGC               TTTTCGGGTTTAAGC  68 178
        gltB  567246 ..  567274 +  -4.6  -3.23869   CAACGTGATCGTCTT       GCAGCTTGC-AGCT TGA AGCTTGCC-GCTGC       TGTTATGAGGTAATG  48 98
JLK41_RS02640  568851 ..  568869 +    -3   -3.3095   CCTGCCCGCACAGGC             ACTGAGCG CGG CGATCAGG             TTGTCACGCATCTGT  46 166
JLK41_RS02650 NONE
        ntrB NONE
JLK41_RS02660 NONE
        cynS  574462 ..  574491 + -18.7  -4.16943   TATGGTCGCGATGGA       CGAAAGGCACGGC ACCC GCCGTGCCTTTTG        TTTTGCGCTCTGCGA 100 53
        hemE  575619 ..  575635 + -15.1  -5.06414   TAGCACCATGAAAAA              GCCCGGC ATT GCCGGGC              TTTTTCTTAGAAACC 100 38
JLK41_RS02680  577007 ..  577022 + -11.8  -4.71426   ATCCGGCAAAGAGAA              GGCGCC CTCG GGCGCC               TTTTGTTCATCAGCG  95 43
JLK41_RS02735 NONE
JLK41_RS02740  594053 ..  594082 +  -9.3  -2.56164   GCGCGATGGCCAGGT       CGCTG-TCTTCGGC CAG GTCGACGATCAGCG       CTTCGTGCTTGGCCA  54 211
JLK41_RS02765  599589 ..  599601 +  -3.4  -4.68506   GCAGGTGACAAAAAA                CTTC CGGGA GAAG                TTTTTGACGTTGCTT  70 67
        glnE NONE
JLK41_RS02785  608560 ..  608589 + -12.2  -3.86015   CGGTCATCTGGGCTA       TGA-CGGGGAGGC GCTGA GCCTCCCCGGTCG       TTTCTGGAAAGGATA  86 43
        waaF  609633 ..  609644 +  -5.8  -2.74523   GAAACCCTGACCCTG                GTCG AGGG CGAC                 TGATCTTGCGGGTAC  46 11
        waaC  610632 ..  610649 +  -2.5  -3.53224   TGGAGGCACTGCTGC             TGGCGCC TCCT GGCACCC              TTTAAGGAGCGGCTA  47 3
JLK41_RS02800 NONE
        rfaP NONE
JLK41_RS02810 NONE
JLK41_RS02815 NONE
JLK41_RS02820 NONE
JLK41_RS02825 NONE
JLK41_RS02830  618407 ..  618425 +  -2.3  -3.27984   GATTGAGGTCTGGGA            C-CGTGGC TGAA GCCCCGCG             TATCTGTTTCTTGAT  44 47
JLK41_RS02835 NONE
JLK41_RS02840 NONE
JLK41_RS02845 NONE
JLK41_RS02850  621954 ..  621966 +  -5.5   -3.0497   GGTGGACATGGTCAC                GTCCA GCG TGGGC                TGTTAAGGCTGCTGT  49 40
        msbA NONE
JLK41_RS02870  626643 ..  626653 +  -8.2  -2.90763   GGACCGCTGGTGCAA                 CCGG GTG CCGG                 TCTATCAGGTGTGAG  55 1
JLK41_RS02875  628072 ..  628082 +    -4   -4.7657   CGTACCCCGAGTTGG                 TCAT GCT ATGA                 TTTTTCCCGTTTTTC  74 43
        hldE  629573 ..  629598 +  -2.4  -2.79133   CCAGCCATGCCCACG         CTGCTG-CGGG CTTGA CCCGACTGCCG         TATGCTCGCGGCTTG  39 61
JLK41_RS02885 NONE
JLK41_RS02890  632208 ..  632223 + -11.8   -4.8622   GACTCCATGAAAAAA              GCCCGC ATCT GCGGGC               TTTTTGCTTAGAAAC 100 47
JLK41_RS02940  642616 ..  642633 +  -4.1  -2.64933   TCGGCGGGGGTTTGC             CGATGTC CTCT GATGTCG              TCATATCGGTCCGTG  40 13
JLK41_RS02945  644262 ..  644273 +  -2.2  -4.58663   AGGGTTCCACGATCC                TCGT TACG GCGA                 TTTTTCCACGCTGCT  68 404
JLK41_RS02950 NONE
        gspE  649117 ..  649150 + -13.7  -2.78384   GCTGAGCATACAGCC     TGCGGCCGGGCGCTC GCGG GGGCGCCCGGGGGCG      TCTCGTACGCCGCGC  73 169
JLK41_RS02960 NONE
        gspG NONE
JLK41_RS02970  651191 ..  651203 +  -5.5   -2.5409   CACGAGGAGTCGGCC                CGTTG AAG CAGCG                TGGGTTCACCATTCT  45 20
JLK41_RS02975 NONE
JLK41_RS02980  652213 ..  652252 +   -10  -2.68223   CCCTGAGGTTCGTAC  GATGAGCGCGACAGGTGCG CAG CGCGGC-GTCGTGCTGATC  ATTGTGCTCTGGGTG  60 21
JLK41_RS02985 NONE
JLK41_RS02990 NONE
JLK41_RS02995 NONE
JLK41_RS03000  655315 ..  655328 +  -2.3  -3.57263   GCCTCTCAGGCCATG               CGCCA CCAT TTGCG                TTTCCCCCTCAGCCT  49 115
        gspD NONE
JLK41_RS03010  658097 ..  658137 +  -9.6  -3.35798   TGATTGCCAGCGCTA CGGCCTG-GCGCGGGACTG GCAG CAGCCTGGGGCGCAGGCCG  TTGTCGCTGAACAAT  63 210
JLK41_RS03020 NONE
JLK41_RS03025  661797 ..  661844 +  -9.6  -4.52589   ATGTAACGTGTTGGG TCGGGGCCTTCCCAAACGGCAG TTTT CTGCCCGGCGGGCGGGCCCTGA TTTTATCTGCGGCAG  84 172
JLK41_RS03030  663735 ..  663775 +  -8.4  -5.75342   ACTAATAGTTGGGTG AGTGA-AAGAAACGGGGCC TTCG GGCCCCGTTTTTTATTGCC  TTTTTTTTGCCGGAG 100 36
JLK41_RS03035  665702 ..  665726 +  -9.9  -5.12617   GCTTGTTACCGCAGA          TCGGCGCTCTT ATC ATGAGCGCCGC          TTTTTTCAATCCTTG 100 96
JLK41_RS03040  666668 ..  666699 + -15.9  -3.12351   AGTAGCGCCAGGTTG      CCCTG-GGCGCCGG TCTTT CCGGCGTCTCAGGG      TTGCATGTCGGCGAA  83 36
JLK41_RS03050 NONE
JLK41_RS03055  670115 ..  670130 +  -5.4  -3.07043   CGCATGATTCCCTTT              TGGCTA CATT TGGCCA               TCTTCGAATCGTCCC  49 237
JLK41_RS03085 NONE
JLK41_RS03090 NONE
JLK41_RS03095  677692 ..  677731 + -17.8  -3.02649   CGGGTGTTTTCGTCG  CGCGCTGTACCAGATCGC CTTG GCGTCCCGGTACAGCGCG   TCTGTGTGGTCAGGT  89 327
JLK41_RS03110  681581 ..  681592 +  -3.6   -5.0133   CCTTCATCCTGGCGT                CGCG CGCA TGCG                 TTTTTTCGCAGGGTG  77 100
JLK41_RS03115  684119 ..  684130 +  -2.2  -3.41602   GTTTTCCAACCGGTG                CTCG TCAG TGAG                 TTGTCATCGCATGAA  44 346
JLK41_RS03130  686812 ..  686835 +  -5.9  -4.56597   CGACGGGCGCGAGGG          CAGGCGGGT TATACT GCGCGCCTG           TTTTTCGCCGAGGCC  74 46
JLK41_RS03135 NONE
JLK41_RS03140  688864 ..  688876 +  -5.5  -3.01712   GGTCACGTCCTCTTA                CAGGC CGG GCTTG                TGTTCGGCGCCGGCC  49 49
JLK41_RS03145  689901 ..  689922 +  -9.3  -3.76224   CAACGCCTAGGCGAT           ACCGGGCGT CAGT GCGCCCGGC            TTTCGTGCATGCGCG  71 31
        serB  692872 ..  692886 +  -3.4  -2.68886   TTCAAGTGCAAAGCT               GAGCGC TGT GTGCCC               TGGCTTCTTGCTTGA  40 61
        motA NONE
        motB  702815 ..  702828 +  -3.8  -3.44527   CCTTGAGCAGTGCCT               CCAG CGCGAC CTGG                TTCTGCTCGTCGATC  49 522
JLK41_RS03200 NONE
         orn  704813 ..  704834 +  -2.1  -4.18197   CGCAGCAGGCCTGGA           GTGGAGCGG ATGG CTGCGCTGC            TTTTGCCTGCCGCCT  60 45
JLK41_RS03215 NONE
        tsaE NONE
JLK41_RS03225 NONE
        mutL  711264 ..  711295 +  -4.2  -3.29837   CGGCCAGTAATTGAG      CCAGTGAGGCCCTG TCGT CAGGACCTCTCCCG       TCTTCGTGTTTCGAG  49 31
        miaA  712297 ..  712337 +  -2.4  -3.57587   TTGAACTGAGACCTT GCCGCTGGCCGTC-TATCC TTGG GGGTGTGACGGTCCGAAGC  TATTGTTTACCTACT  49 32
         hfq NONE
        hflX  714018 ..  714036 + -17.4  -3.33711   TGGGTAGCATTGGCC             GGCGCGCC GTG GGCGCGCC             TTCGCTTTATCAGTA  93 78
        hflK NONE
        hflC  716192 ..  716208 + -13.7  -5.14477   TGGTATGATGCGGCA              GCCGGGA AAA TCCCGGC              TTTTTTGCGTCTGTG 100 113
JLK41_RS03260 NONE
JLK41_RS03265  717621 ..  717637 +  -7.9  -2.66118   ATGGACGTTGGCAGG              TGACGCC CCT GGCGTCC              TGAATTCATTTTCGC  52 6
JLK41_RS03270  719015 ..  719032 + -12.7   -4.3467   TTCGATCACTGAAAA             GACCGCC TCCG GGCGGTC              TTTTCGTATCCGGGT 100 48
JLK41_RS03275  721071 ..  721088 + -14.1  -4.83169   AGGTCTGAGTGCGGA             GGCCGCC TGCT GGCGGCC              TTTTTCTGCGGGCAT 100 33
         rnr NONE
        rlmB  724904 ..  724922 +  -6.6  -4.57474   CTCTAGAATGGCGCC             CCTTGCCG TGA CGGCAGGC             TTTTCTATGCCTTAC  76 86
        rpsF  725458 ..  725475 +  -2.6  -3.12702   CACGGATCTATTGAG             GAGCCA ATCACA TGGCAC              GTTTCTTCCGTCGTC  43 43
        rpsR NONE
JLK41_RS03310 NONE
        rplI  727148 ..  727178 + -17.7  -5.01422   GGTCTGCTGACAATC      GGGCACGGTATCGC TTCT GCGAT-CCGTGCCC       TTTGTTTTTCTATCG 100 76
        dnaB  728683 ..  728712 + -12.2   -4.8622   GCAGATCAATGAAAA       CGGGTGCCCA AGGGTTAAGA TGGGCACCCG        TTTTTCGTTCAGGCC 100 99
         alr  730060 ..  730088 +  -4.5  -4.11692   CGGACAGCTCGCTGA       CCAGGCGTGCGG CGATTT CC-CGGGCCTGG        TTTTCCGCATCGCTG  62 274
JLK41_RS03335  734249 ..  734267 + -11.7  -4.96848   CACGCTGAATGAAAA             CGCCAGC CTCGA GCTGGCG             TTTTTCTGTCCGCCC 100 33
JLK41_RS03380  751511 ..  751546 +  -7.4  -2.87931   ATCCCGTCTGTGGCA    GGGGCCTTGGCCGCGA ACCG TCGCTGCTGAAGCGCC     TCTGTCACGGATGCA  51 46
JLK41_RS03385 NONE
JLK41_RS03390  755066 ..  755082 +  -2.1  -3.16564   AGAAGAAGCTGTAAT              CCTCGCC AGC GGCCAGC              TTGCTCACATCGAAG  42 109
JLK41_RS03450 NONE
JLK41_RS03455  765579 ..  765604 +  -5.3  -3.03159   CCAGCTGGAAGCGCT         GGGCGCCGG GGGTACGG TCGGCGCCG          TCTTCGGCCAGTTGC  47 182
JLK41_RS03465  767018 ..  767038 +  -4.7  -2.90941   CGCCAAGCGCTCGGC            TGGCTGC ATCCGCC GCAGTCA            TCTATACCCTCTAGT  45 71
JLK41_RS03470  767601 ..  767611 +  -2.4  -2.73159   AGGGGCTCAGCATCA                 CCCG CTT CGAG                 ATTTCCCGACCTTGA  39 0
JLK41_RS03475  770235 ..  770247 +  -4.7  -3.41961   GGGCGTCAGCGCGGG                CAGCG GTG CGCCG                TTCATTCCTGCTGCT  51 451
JLK41_RS03510 NONE
JLK41_RS03515 NONE
JLK41_RS03520 NONE
JLK41_RS03525  778435 ..  778460 + -10.5  -2.50443   CGGGCCTGGCTGAAA         GCTGGCAGCAAG TGC CTTGC-GCTAGC         ATTCGTCACGTCTAC  60 61
JLK41_RS03530 NONE
JLK41_RS03535  779756 ..  779773 +  -5.5  -2.98072   GAACGAATGCGGCAC             CTCTCGG CGCG TCGAGGG              TCTAGTTCTACTACG  48 39
JLK41_RS03540 NONE
JLK41_RS03545  781089 ..  781101 +  -6.2  -3.36327   GTCGACCTCGATGCT                CGGC AGGTA GCCG                TTGTGGATCAGGTCG  55 218
JLK41_RS03685 NONE
JLK41_RS03690  815412 ..  815434 +  -7.6  -2.77283   TGGAACGCTACATGA           ACAGACCGCC TGC GGCTGTCTGA           TGCCTTTGTTACTGG  53 3
JLK41_RS03695  816185 ..  816207 +  -6.2  -3.96148   TTGCTTAAATTTTCC           GACTGGCC GCCCGCA GGCCAGGC           TTTCTCATGGGAGAA  62 107
        speA  818157 ..  818202 + -14.2  -3.13403   GCTCAACTGATCGCC TCGGCCAGGCGTCGAGCCAGGTG CAA CGCCTG-CTCGGCGC-TGG-CGA TATTGGTGAAGCCCA  78 42
JLK41_RS03710  820061 ..  820077 +  -5.1  -3.59979   GCTGGCCATCGGCAT              GCACTTT CGC GAGGTGC              TTTGAAATGCAGCGA  54 4
JLK41_RS03715 NONE
JLK41_RS03720  821632 ..  821647 +  -8.2  -3.27298   ATCAGGGGGCGAGCA              GGCTGC GGTT GCGGCC               TTCGTGCTTGGCGCG  59 522
JLK41_RS03740 NONE
JLK41_RS03745 NONE
        pbpC  832043 ..  832053 +  -3.2  -3.66139   CCGATAGGACATCTG                 TCGG TCA CTGA                 TTTGCAATCTGTGTA  51 136
JLK41_RS03755  834393 ..  834408 +  -5.4  -3.27774   TCAGGCAGGCATCGC              CACTGGC ATG GCC-GTG              TTCGTCGTTGACCTG  51 362
JLK41_RS03765  836769 ..  836783 +  -3.4  -3.14564   ACGCTGGACAGATGG               CGGGCG AGC TGGCCG               TTGATGCCGGCCTGC  44 385
        fdnG NONE
        fdxH NONE
JLK41_RS03785  841841 ..  841854 +  -2.3  -2.68823   GACCGCCCCCGGCCA               AGCAC CACG GTGCG                CTTCTGTAGAAGCGG  38 195
        fdhE NONE
JLK41_RS03795 NONE
        selB  847014 ..  847026 +  -4.1  -4.57569   CCTCTATCCCTTGCA                GTGTT TTC GACAC                TTTTTCGACAGCTAG  68 229
JLK41_RS03805 NONE
JLK41_RS03810  849449 ..  849503 + -10.9  -5.00616   AGGGGACAGAGGAAA AGGGACAGATTTATTTATGGTGCAG CTCCA CTGATCTAAAAATAAATCTGTCCCC TTTTTTCCCAAGGAA 100 123
JLK41_RS03825 NONE
JLK41_RS03855  855360 ..  855373 +  -4.5  -3.26405   CCGGCCTCGGCAACT               GTGTC GATA GACGC                TGATTTTTCCATGGC  49 144
JLK41_RS03865  857580 ..  857597 +  -9.1  -3.24747   TTGATCAGGGCCGGG             CGCCGGA CGAC TTCGGCG              TTGCTGCTGTGCAGG  61 215
JLK41_RS03910  863277 ..  863318 + -11.5  -3.15758   CGTGACGCGGGAAGT GGCCGGCGCTTGAGTGGCGA CGG TCGCCGCCCAATC-CCTGCC TTGCTGCACGCTTCT  69 36
JLK41_RS03925  867349 ..  867376 + -20.6  -5.42259   GCAACTCCGTGATTC        GGGCGGCC-CGCG TAG CGCGTGGCCGCCC        TTTTTTTCGCCCTGC 100 84
JLK41_RS03935  871594 ..  871620 +  -6.7   -3.5627   CGGCTAGTCTTTCAA        CGT-GCATTGAT CCAG ATCAATGCCGCG         TTTCGCGCGTCGTCT  60 102
JLK41_RS03940 NONE
        cydB  874207 ..  874260 +  -5.2  -3.17075   GATGATGGCTACCAC TGAG-AATCTGCGCGAAGCCTGCTGC GCTG GCAGCGGGCT-CGGGCGGGTGGCGCG TTGAATTGGGGGGCG  48 23
JLK41_RS03950  874451 ..  874465 +  -7.1  -2.64803   TGCAGGCGCCTGCGG               TCGGC TCAGT GCCGA               TACATTTGAAAATCA  49 43
JLK41_RS03955 NONE
JLK41_RS03960  876059 ..  876083 +  -2.8  -4.07885   GTCCACCGTGGTCTC         GATGCTGGTGC CTTT GCCCCGG-ATC          TTTTGCAAAAAAATC  57 138
JLK41_RS03965  878615 ..  878658 +  -8.1  -3.66018   TCTGAGGCTCGCTTC GCGCCCGCTGCCAGC-AC-GC GCCG GCAGTTGCTCATGGCGGGCGC TTGTTCCCATACTGC  64 36
JLK41_RS03970 NONE
JLK41_RS03975  881812 ..  881828 +  -3.5  -4.25283   TCGCCGGCCGGTCCC              CCAGCGC CGC GCGCCAG              TTTTCCTGCGCCGAT  65 372
JLK41_RS03985  883533 ..  883556 +  -6.6  -3.05521   TGATGCGATGCTCCC          AGCGGCGCTT GGCG AAGCGGCGCA           TGTTGGGGATGTCGT  49 64
JLK41_RS03995  884929 ..  884944 +  -2.4  -3.15544   GACCTGCTGCACGGG              GCTACC TGAT GGGGGC               TTGATCAGGGTCAAG  43 17
JLK41_RS04000  885712 ..  885726 +  -7.1  -3.73775   TTTCCACGTCCTCCT               GCTCC CAGTC GGAGC               TTTCGTAGGCATAGA  61 442
        radA  887341 ..  887376 + -10.5   -3.4691   GCTATCTACGCGCAG    CATGAAGGTGTATCC AACGAA GGAGACACCCTCATG     TTCCTGTTCTTCGAT  70 109
JLK41_RS04015  887764 ..  887780 +  -3.6  -3.66378   CTCCAATCGCGTGGC              GTCCTG ATCAG CAGGCC              TTTGAGTGAGATGTC  54 269
JLK41_RS04025  888596 ..  888619 + -18.2  -3.52204   GATCCCAGGCAAAAA          GAAGCCCGCC GATC GGCGGGCTTC           TTCATTTCAGGCTGA 100 53
        ettA  896292 ..  896309 + -12.7  -4.93365   CCGGTGGATGAAAAA             CGGAGCC TGCG GGCTCCG              TTTTTCGTTGTGGCG 100 45
JLK41_RS04055 NONE
JLK41_RS04060  899390 ..  899406 +  -5.1  -3.10409   CGAATCCCCCTACCC              CGACC ATATTTG GGTCG              TTAGCTCAGTTGGTA  46 20
JLK41_RS04065  899489 ..  899505 + -10.8  -4.84527   CCACCATTCGAAGAA              GCCCGC CTAGC GCGGGC              TTTTTCGTGTCTGGC 100 38
JLK41_RS04090  903250 ..  903271 +  -4.4  -3.15663   TGGCGCTGCATCGAG           CGCCTG AATGGCGGGC CAGGCG            TTGATGCGAGTCAAT  48 42
JLK41_RS04095  903603 ..  903644 + -10.2  -2.74999   CTCGGCCAGGCGGTT GCTGCTCAGT-GCGGCC-GC GTTG GCAGGTCGCCGCTGAACAGC TCGTCTTCCAGATTG  61 75
JLK41_RS04125  909107 ..  909126 +   -15  -5.28176   CTGCTGACCTAAGAA            GCCCCGCA TTTT TGCGGGGC             TTTTTTATAAATGGA 100 56
JLK41_RS04130 NONE
JLK41_RS04135  911831 ..  911845 +    -5  -3.94067   TATGCCTCGGGGTTG               CTTCTA GTC TGGAAG               TTGTTCTGTCTGCTC  59 491
JLK41_RS04150  915445 ..  915463 +  -6.7  -2.64616   CGCGCGCCTCCGGCG             TGAGGCA CTGCA TGCCTCG             TCCTGTGCCTGAGGG  49 76
        ampD NONE
        ampE  917113 ..  917128 +  -4.6  -3.50722   ATAAGGGGTATAAGG              GGGCGG TAGC CTGTCC               TGTTTAGTGATTCGC  52 158
JLK41_RS04165  919299 ..  919309 +  -8.2  -2.78384   CAAGCAGTTGATCGG                 CGCG TTC CGCG                 TCTGATCGGCCCGAG  53 10
        ptsP NONE
        pfkB NONE
JLK41_RS04190 NONE
JLK41_RS04195  929232 ..  929290 + -11.3  -2.96216   CCAGCGCAGCAGTAA ----CGTAGGGCGGGTGCAACCCGCCG-GT TTCG GCGTGGCGGGTTGCACCCGCCCTACGTCGC TGTCTGGTAATGCGC  66 26
        urtA  935930 ..  935957 + -14.2  -3.60792   GCTGCAAGCCGCAAG        CGGCAAGTGGAG CGTG CTCTGCTTGCCG         TTTGAAGCTTGAGGC  88 53
        urtB NONE
        urtC NONE
        urtD NONE
        urtE  939835 ..  939865 +  -6.1  -4.62069   AGTGGCTCCCGCTTT       ACGGTCACTGTGT TCTCC ATGCAGTGGCCGC       TTTTTCGCGTCCGCG  76 164
JLK41_RS04240  941257 ..  941292 +    -3  -2.60813   TACGACAAGTGATGT    CACTCCCCCTCTCCTG AATG CGGGGGAGGGGCCCAG     GTCTTTCGAGGAATG  38 29
JLK41_RS04245  941674 ..  941725 + -12.4  -3.42056   AAACAGCAGCGACAA GCTGCAAGCCACAAGCGGCAAGC AGAGCGC GCTC-TTGCTTGAGGCTTGCAGC TTGTCGCTTGCGGCT  79 39
JLK41_RS04250  942799 ..  942826 +  -5.5  -2.75389   CGCACTGCTGGCTGA        TCGCCCGTAGG AGCCGG CTTGCCGGCGA         TGCCTTTGTCTCTGT  46 26
JLK41_RS04255  943901 ..  943911 +  -2.4  -3.73953   TAGGAGCCCGCTTGC                 GGGC GAT GCGC                 TTTCGTCGCCATGAT  52 38
JLK41_RS04270  949398 ..  949410 +  -3.4  -3.38951   GAACCTGTCAGGCGT                TTCG CTGCC CGAA                TTCATGTGTTCCTGG  47 434
JLK41_RS04275  950632 ..  950650 + -11.7  -4.56914   GACGCTGTCTGCAAG             CGCCCAC CTCGT GTGGGCG             TTTTCATTTCCGTCG  95 46
JLK41_RS04280 NONE
JLK41_RS04285  952696 ..  952710 + -11.4  -2.57463   GTAGGGCCGTTTCAG               GCCCTG CGC CAGGGC               GTTGTGCGGGGGATT  64 182
JLK41_RS04290  955028 ..  955061 + -16.8  -3.16742   ACAGGCACGCCCGAT     TGTCCAACGCCCCGG CTGGT CCGGGGCGTTGG-CG     TTCATGCAGGTTGGC  89 60
JLK41_RS04295  956189 ..  956207 +   -16  -3.00022   TGGTGACTCCTGATC             GGGTGCGC GCT GCGCACCC             TGTCTGTGGGCTGAG  83 324
JLK41_RS04310 NONE
JLK41_RS04315  958929 ..  958962 +  -3.7   -4.1721   CTTGACGTCAGGCGG     AGCCTGGGCCCCGGAT TTC ATCCGGGCTAC-GGCG     TTTTCGCGTGTCCCT  62 141
JLK41_RS04335  962714 ..  962727 +  -3.8  -3.01712   GTGGTTGTACCGACG               GCAG GGCGAA CTGC                TGTTCGCAGAGGGCG  44 224
JLK41_RS04345  964689 ..  964710 +  -9.4  -3.04144   GCGGTCGTCGCCGAT           GGCGCTGG CGGCGT TCAGCGCC            TCTTCCAGGTCACCC  57 189
JLK41_RS04365  968043 ..  968066 +  -5.3  -3.14647   CGTTCAGGCGACTCA         GC-GGCGCTCC AGCA GGA-CGCCCGC          TTCCATGTGATGGGT  50 43
JLK41_RS04380  971882 ..  971895 +  -9.5  -3.37796   TGTCGCCGAACAGCA               GGGCG CAGA CGCCC                TTGTCGCTGCTCGCC  63 491
JLK41_RS04390  974095 ..  974113 +    -3  -3.53012   AGGGGGCGGTCGTAG             AGGGCC GCCGCCG GGCCCA             TTTCCACCGGGCGCC  49 282
JLK41_RS04430 NONE
JLK41_RS04435  984350 ..  984370 + -11.1  -2.56596   GCCGCTGAGGCCATT            GGCTCGGAG CGG TTCCGGGCC            TCGCTTCATGGCCGC  64 33
JLK41_RS04440  985698 ..  985715 +  -8.4  -3.34013   GCCGCTGCGCGTCCA             CACGCC GCCCCA GGCGTG              TTCGTTGACGAAGTC  58 312
        mreB  992114 ..  992142 + -13.2  -3.04322   TGCCGTGGGGCTCGC       TGT-CGTGCCGCC TCCG GGCGGCACGCGCA        TATTCGAGCATTGCA  76 46
        mreC NONE
        mreD  993709 ..  993755 +  -2.1  -3.14602   TGAGCGCGGCCCGCC GCACGGCTGGTCGCGGT-TCGCC AAC GGAGATACC-CGCATGGCCGAGC TGTTCCTGGCCTCCG  43 38
         maf  994387 ..  994399 +  -4.7  -2.64099   TCCCGAAAGCTTGAG                TCCGC GGG GCGGC                GTTATGGTCCGGCCG  43 64
         rng  995908 ..  995941 +  -3.1  -3.16564   GAGCGCCGCGAGCGC     TGAGGTGAAC-GGC CTGGTGC GCCTGTTCACCACC     TTGCTGCGCTGGGGG  45 39
JLK41_RS04500 NONE
JLK41_RS04505 NONE
        tldD 1002147 .. 1002159 +  -4.7  -4.15044   TGAACACCTTGCGTG                CGGCC GCC GGCGG                TTTGTTGCGCGCGGC  62 96
        pmbA 1004091 .. 1004110 + -10.7  -4.05446   GGCAGCTGATCCCCA            GGCCGAC CGCCGC GTCGGCC             TTTCTCGTTGCGCGC  80 32
JLK41_RS04525 1004594 .. 1004606 +  -3.3  -2.73681   ACGACGAATCAGCTG                AGGGA CCA TCCCA                TGCTTGAAATGACTG  41 6
JLK41_RS04530 NONE
JLK41_RS04535 NONE
JLK41_RS04540 NONE
JLK41_RS04545 1008343 .. 1008357 +  -2.1  -4.35044   GTCGCGGTGACGCAC               CTGGA CGTTC TTCAG               TTTCTCTTTCAGTGC  63 369
JLK41_RS04600 NONE
JLK41_RS04605 NONE
        mlaE NONE
        mlaD NONE
JLK41_RS04620 NONE
JLK41_RS04625 NONE
JLK41_RS04630 NONE
        murA 1019957 .. 1019972 +  -3.2  -3.29144   TGGCAACTCGCTGTG              CGCCGGC CCT GCTG-CG              TTGTGACGGGCCTGC  47 49
JLK41_RS04640 1020726 .. 1020751 + -11.2  -3.55071   CAAGGCTGATCAATG         GCACGCCTGCC CTAGC GGCAGG-GTGC         TTTACCAGCCTATCC  74 32
        hisD 1022178 .. 1022206 +    -9  -3.64703   CTTAACGGCCGCGCA       G-GGTGGACAACGC TAC GC-TTGTCCACCGC       TTTGCATAAGACAAC  68 36
JLK41_RS04650 1023316 .. 1023353 + -23.7  -3.19246   GACGCTCGCGGGGCA   GGCATGAAAAAGCCGGC TGAT GCCGGCTTTTTCATGTC    TTCAGTTACCGTTGG 100 41
JLK41_RS04660 NONE
        cysD NONE
JLK41_RS04670 NONE
        cysN 1028772 .. 1028794 + -13.4  -4.72272   CTCTGCTGAACGAAA           GGCCCCGC CAGATGT GCGGGGCC           TTTTTCGTCAGGGAG 100 46
JLK41_RS04685 NONE
JLK41_RS04690 1031728 .. 1031755 + -20.6   -4.8622   CGGATTGCCAATCCA        CGGGGGCGTCGC TAAA GTGACGCCCCCG         TTTTTACTTGCCCGG 100 95
JLK41_RS04695 1033022 .. 1033040 + -11.7  -4.90266   TGGCGAAACGAAAAA             GGCGACC CACAA GGTCGCC             TTTTTCGTTCGTGCC 100 45
JLK41_RS04710 1036856 .. 1036895 +  -8.4  -2.72344   GGCGAAGCGACTGAA  C-AGGCTGATGCGCGCACC CTC GGGGCGCGCGCCGCCCTCG  TACTTGCCGCTGAGC  52 415
        rplM NONE
        rpsI 1038730 .. 1038756 + -12.3  -5.76949   CTACGCTTCCAAAAG         CGCCCAGTTTC CTTAC GGAGCTGGGCG         TTTTTTTTGGGGGTG 100 47
        petA NONE
JLK41_RS04735 NONE
JLK41_RS04740 1041570 .. 1041595 + -21.9  -5.04325   GGGTTCCGTCTCGAA         CCTGCGCGCCC TGAT GGGCGCGCAGG          TTTTTGTGCTTTAGC 100 49
JLK41_RS04745 NONE
JLK41_RS04750 1042861 .. 1042890 + -22.3  -3.91084   CTGCGAGGTGGAAAT       GAAAACGGGCGCC CTGG GGCGCCCGTTTTC        TTTGCTTGCAGCTCG 100 64
        rsmI NONE
        rnpB 1047809 .. 1047819 +  -5.4  -4.78149   TTCGCTAAATCTCCG                 TCCT GTA AGGA                 TTTTTCCCTTCTGGC  81 198
        mraZ NONE
        rsmH NONE
        ftsL NONE
JLK41_RS04800 NONE
JLK41_RS04805 NONE
JLK41_RS04810 NONE
JLK41_RS04815 NONE
JLK41_RS04820 NONE
        ftsW NONE
        murG NONE
        murC NONE
JLK41_RS04840 NONE
JLK41_RS04845 NONE
        ftsA NONE
        ftsZ 1064689 .. 1064714 +  -3.1  -2.76815   TTGGTGTTCAGCAAA         GGTCGGTTCTG CTAT CATTTCCGACC          ATTGTTGAAAACAGT  41 68
JLK41_RS04860 1065697 .. 1065714 + -12.7  -5.24531   CCTAGCTGCAATTGA             GGCCACC TTCG GGTGGCC              TTTTTTATGGCCGCT 100 53
JLK41_RS04865 1066296 .. 1066315 +  -3.4  -3.29511   CGCCGCGACGGAGGG            CCGCTGAC ATGG GCCAGCCG             TTCTCCCGCCGTCAA  47 19
JLK41_RS04870 1067733 .. 1067748 +  -7.5  -2.56596   GTTCTTTCGTACTGG              CCGGC CTCGCT GCCGG               TGGCTTGCTGGCCGC  49 60
JLK41_RS04875 1069139 .. 1069159 +  -8.1  -3.15579   CTGGCCGAGCAGTTG            CAGCGCCCG CGT CCGGCGCAG            TTCGTCGACGATTGC  54 179
JLK41_RS04885 NONE
JLK41_RS04890 1073741 .. 1073780 + -10.7  -3.55622   GGCTTTCCACAAGAC  GCTGCAGGTTGGTCAGGC GTTGG GCCTGACCGAACAGC-GC  TTTCAGGGGCTTGGC  70 386
JLK41_RS04900 1074900 .. 1074936 +  -8.6  -2.89564   CCCATCTATGGGGCC   AGGC-CGTGTTCCCGGG CTGG CCCGGGGACCTGTGCCG    TCTGTGCCGTCACGC  55 82
        secA 1077875 .. 1077903 + -24.7  -4.18058   CCAGCGCCCTGACAG        CGCCGCGAACGGT TCG ACCGTTCGCGGCG        TTTTACCATCTCATT 100 79
        argJ 1079257 .. 1079290 + -19.7  -3.92324   GTCGTTCTCCAGCTA     TTCCCGCGCCTCATG AGGC CATGACGCGCGGGAA      TTTGCTATTGGGCGA 100 103
JLK41_RS04915 NONE
JLK41_RS04920 1080930 .. 1080952 +  -4.8  -4.08216   TTCTGGCCAGACGCC           GCCCTGTA GTCGCGG TTCAGGGC           TTTTCGGCAGCCTGC  61 17
JLK41_RS04945 1086182 .. 1086203 + -15.9  -4.10552   TTGATAGCACTTTGA           CCGCCATGG CATG CCATGGCGG            TTTCGTTTCATGCAC 100 74
JLK41_RS04950 1087083 .. 1087107 + -17.2  -4.67755   AGCCGCCGCAACGAA          GAAGCCCCGG CAGGT CCGGGGCTTC          TTTTTGCCTGGCTGT 100 44
JLK41_RS04965 NONE
JLK41_RS04970 1091549 .. 1091579 + -18.4  -3.53444   GAGCCCGCTGCAACG       AAAAAGCCCGCGAC CTG GTCGCGGGCTTTTC       TTTACGGCGGGGTCA 100 51
JLK41_RS04985 1094326 .. 1094341 +    -4  -4.56597   CGTGTGCCATGCGCG              CCT-AGG CTT CCTGAGG              TTTTTCCCCCAACCA  68 60
JLK41_RS04995 1096534 .. 1096559 + -15.5  -5.26316   GGTCTTGCAGAAAAA         TGCCCGC-CTCC CTG GGAGCGCGGGCA         TTTTTTATGGCCTGC 100 42
        murJ 1098633 .. 1098650 +  -6.2  -3.36327   CGCGACTTTGCCCGA             CGGGCG CTTTGA CGCCTG              TTGTGCATGGCGTGC  52 14
        ribF NONE
        ileS NONE
        lspA NONE
JLK41_RS05025 1103469 .. 1103503 + -17.9  -3.57792   CAGCCGCGAGCTCTT     CTTGCAGCCTGCGCG TATTC CGCGCAGGCTGCGAC     TTTCGGGATCACTCA 100 71
        ispH 1104523 .. 1104540 + -12.7  -4.90266   CGCTGCTAGGAAAAA             GACGGCC CTGA GGCCGTC              TTTTTCGTTACTCCG 100 42
        thiO 1114565 .. 1114584 + -13.6  -3.39327   GCTTGCGCTCGATTT            CCTCGAGG TAGT CCTCGAGG             TTGTCGATCTGCGCC  75 190
        rluD NONE
        pgeF 1120792 .. 1120846 + -33.2  -3.30554   AGCGGTCTGTGCGGA CC-GTAGGAGCGGCTTCAGCCGCGA TGCATT TCGCGGCTGAAGCCGCTCCTGCAGG TTCGTCATTACTTCG 100 113
JLK41_RS05105 NONE
JLK41_RS05110 1122740 .. 1122764 + -17.2  -4.07568   CTGAGCCCCTGTGAA          CTGGGCGTCG TAATC CGACGCCCAG          TTTTCGGCCCCGGCA 100 37
JLK41_RS05125 1126479 .. 1126497 +  -5.8  -3.28712   GGTGATGCCGCCGAA             GCTCAGGC TCT GCCAGCGC             TTCTCGCGCAGCCAG  51 140
        trxB 1130420 .. 1130469 +  -7.8  -3.31144   CCGGCCAGTGCCATG GCGGCTCGTCCAG-CATGC-CCTG GCCG CGGATGCAGGTCTGGCCGAGCTGC TTGTCCAGCTCCAGG  59 119
JLK41_RS05230 NONE
JLK41_RS05235 1152782 .. 1152807 + -19.1  -4.82901   GCGGGCAGCCATTCG         CGCCCCTGTTC GCAA GAACAGGGGCG          TTTTTATCGGGCGGG 100 48
        moaC NONE
JLK41_RS05245 NONE
        moaE 1154241 .. 1154268 +  -9.2  -2.96216   TGTAAAACCAGCATT        CAGCGGCGCTG ACTTTCC CAGCGC-GCTG        TCTCTCGTAGTGGCG  59 76
JLK41_RS05260 1156634 .. 1156647 +  -3.7  -2.64155   AGGGGGAGCACGCAC               CCGCC CATG GGCTG                TCGATTTCGACGCGC  40 40
JLK41_RS05265 1158110 .. 1158131 + -10.1  -2.71924   ACGCGCCACGCGATG           CGCCTCG-GC AAA GCTCGGGGCG           GTTTGCAGGCAGATA  57 381
JLK41_RS05280 1158773 .. 1158794 + -14.5   -5.4505   CACCATATATATCAA           GGGGTTAGC GCAA GCTAACCCC            TTTTTTATTGGGCCG 100 36
JLK41_RS05300 1160762 .. 1160776 +  -9.2  -2.73681   GGGTCGGTTGGGCTA               CCGGGC GTT GCTCGG               TGCTTGACGTGGATA  57 59
JLK41_RS05305 NONE
JLK41_RS05310 1162006 .. 1162017 +  -4.4  -3.53563   TCAGGCCTGGCTCTT                CCAT GCCC ATGG                 TTTCGAGGAACATCT  52 403
JLK41_RS05360 NONE
        prfA 1171749 .. 1171763 +  -2.7  -2.81045   AACCGCAAGGCACAC               GCCGC CGAGT GCGGG               TCATCTTGTCGCTGA  39 194
        prmC NONE
JLK41_RS05375 NONE
JLK41_RS05380 NONE
JLK41_RS05385 1174806 .. 1174825 + -16.4  -4.27316   CGCTGCAGACGAAAA            GGCCGGGC AGAT GCCCGGCC             TTTTCGCTTCAGGGG 100 46
JLK41_RS05445 1185705 .. 1185720 +  -3.2  -2.86151   AATGACTAGGATTTC              GCATGA CCGA TCACGC               ATTGTTGCTGGTTAA  42 36
        hemH 1186835 .. 1186852 +  -3.3  -4.10164   TCTGATAACACCTTC             GGGCGAT ACTC ACCGCTC              TTTATATCGTCCTAA  59 131
JLK41_RS05455 1188274 .. 1188298 + -17.9  -3.85698   GCGGTGTTTTTCCGG          GCGTGCCGAGG GGA CTTCGGCACGC          TTTATGCGCCAGGGC 100 42
JLK41_RS05460 1189162 .. 1189176 +   -10  -2.80443   TAGCGCTTCACTGCA               TCCAGC GTT GCTGGA               TCTGCTCCAGTGTGC  61 38
JLK41_RS05475 1191769 .. 1191783 + -11.4  -2.80816   CCGTCTCACCGAAGC               GCGGCA CGC TGCCGC               TCTGGTCGCTGACGC  63 251
JLK41_RS05495 1195099 .. 1195135 + -14.3  -2.75183   ACGCTACAAGTGACG    GGGGTGGCCGGGTGTCG GAC TGGCGCCCGGCCAAGCC    TCATTCGCTCGGGCT  77 28
JLK41_RS05510 NONE
        lpdA 1199252 .. 1199291 +  -2.9  -2.52464   AATTGAAGGCCACGT CGCGGT--GCAGTTCGA ACTCCTCC TCGAACGGCTTGCCGCG  TACGTTGCCGGCCAG  39 259
JLK41_RS05575 1212636 .. 1212652 + -10.1  -3.21593   GCGTTGACGCCGTGC              GCGGCCT GGC AGGTCGC              TGTTCTGGCCGCCTG  65 34
JLK41_RS05580 1213841 .. 1213864 +    -3  -3.82031   GATCGGACAGCTCGG          CCAGGCG-CTG GCC CAGGCGGCGGG          TTTCCTCGTCGTTGG  56 135
JLK41_RS05590 1215381 .. 1215399 + -17.4   -5.1356   CGCCGGATGAACGAA             CGCCCCGC ATT GCGGGGCG             TTTTTCTTGGTCGCG 100 46
JLK41_RS05605 1217901 .. 1217922 +  -2.1  -3.57615   CACATCACCACGGCG           TTGACCGCG ATGG TGCGGGCAC            TTTCCACGCTATTGC  48 381
JLK41_RS05615 1221418 .. 1221435 +  -4.1  -3.34895   GCTGGCGATGATCGC             CTGGCTGT GGC GC-GCCAG             TTCGTTGCGGCTGCG  47 96
JLK41_RS05630 1224057 .. 1224077 +  -3.9  -3.64703   ATGGGATTAATGTGG            CCTCGCG TTTTTTC CGAGAGG            TTTCCATGCGCCGCG  51 66
JLK41_RS05635 1224910 .. 1224963 +  -7.2  -3.65991   TCAAGCTGTCGTGGC CGGCATGCTAGGGTGCGCCTCGGT CATTAA ACCGAGGCCCGCCATGTCGATCCG TTCTCTTCGCCGCCT  60 67
JLK41_RS05640 NONE
JLK41_RS05645 1226557 .. 1226581 +  -9.9  -3.36273   ATTGCCTGTCGTCAC          CGCCTGTAACG GGG CGCTGCGGGCG          TTCCTCTTGCCACAG  68 194
JLK41_RS05650 1227958 .. 1227973 +  -4.6  -3.23853   CGTTGCCAGGTGCTT              GAGCCA GGCC TGGCGC               TGTTCGTTGCGAAAG  49 194
JLK41_RS05660 1230087 .. 1230105 +  -5.3  -3.30124   CCGCGACTTCCTGGC            GCTCA-GC TTCG GCGTGAGC             TTCTAGGCCATCAGG  52 1
JLK41_RS05665 1231526 .. 1231552 + -18.1  -5.08824   GACTGCCTTGAGCGA         GCCGGTGTCAC TGCCC GTGACACCGGC         TTTTTTGCATCGGGC 100 45
JLK41_RS05670 1234496 .. 1234520 +    -2  -3.14564   GATGCCGAGCAGCGG          CAGGGCCCAG AACGG CTGGATCATG          TTGGTCCAGGCATCG  42 234
JLK41_RS05695 NONE
JLK41_RS05700 1241313 .. 1241332 + -12.1  -2.52543   CTTTTCTGCCAGATA            CCGGGCC CGCTGC GGCCCGG             TGCATTCGCGAGGAT  68 44
JLK41_RS05705 1242985 .. 1243015 + -19.8  -3.44051   CCTGCTCCGGCTGGC       GGCGCTGCTATCGA TGC TCGGTAGCGGCGCC       TTGTGGTGCTCGGGG 100 67
JLK41_RS05710 1243940 .. 1243984 +  -4.7  -3.74347   GGTTGAAGCTGTAGC CGCCGGTCAGCAGCAGGCGTG CGA CATGGCTGCTGCACCCAGCCG TTTCGAGTTTCTCGA  55 440
JLK41_RS05720 1245988 .. 1246044 +  -7.2  -2.52896   CGCTCAGTGCGGCAA GCTGTGGCCAGAAGTCGCGGCCGATCAG TAC CGGGT-GGCCGCGGCTGCCG-CGATAGC TGGGTTGCACGATGC  47 173
JLK41_RS05740 1251116 .. 1251171 + -11.1  -2.73735   GCTGCCCAATCCGGA CCCCT-TCGTGTGAGCCGCGGGCCTGG ATCG CCAGGCCCGCGGCA-AGACGGCAGCCG TGGTTGCCGGTGTTT  65 13
JLK41_RS05745 NONE
JLK41_RS05750 NONE
JLK41_RS05755 1255631 .. 1255647 +  -2.2  -2.52464   TGCGCGCCGCCGTTG              CGGTGG GGTGA TCATCG              TCCGTTCAGACGACG  37 15
JLK41_RS05760 1256507 .. 1256522 +  -3.2  -2.88249   AGTCGCGAGCCGCTT              TAGTCC CATC GGACGA               TGTCTCCGGCGTGTG  42 40
JLK41_RS05765 NONE
JLK41_RS05770 NONE
JLK41_RS05775 1258798 .. 1258835 +    -7  -5.06414   CGCTGACCCTTTCCG   CCCTTCTTCCCGTG CTGGCTGGTC CATGGGCAGGAGGG    TTTTTCTTCACCGGC  89 46
JLK41_RS05780 1260353 .. 1260401 +  -9.4  -3.28712   CTTGTAGATCATCGC CTCGCGGCGCAGGCT-GCCATCC TGGG GGCCGGAGAGCATGCGCAGCGAG TTGTAGCGCAGCACC  61 425
JLK41_RS05795 NONE
JLK41_RS05800 NONE
JLK41_RS05805 NONE
JLK41_RS05810 NONE
JLK41_RS05815 NONE
JLK41_RS05820 NONE
JLK41_RS05825 NONE
JLK41_RS05830 NONE
JLK41_RS05835 1271374 .. 1271385 +  -3.6  -3.28924   TGACGATCATCGAAC                GCCT GTAA GGGC                 TTCTGGCAGAACCTG  47 18
JLK41_RS05840 1272345 .. 1272367 +  -4.8  -4.14243   TTCGCAAGACCGCCC           CGAGGGCT GTTCGCA AGGCCTCG           TTTTCCGCTGGCGTA  61 59
JLK41_RS05845 NONE
JLK41_RS05850 NONE
JLK41_RS05855 1275170 .. 1275190 + -11.1  -2.53263   GTTGCCGCCATCTGC            CTGGTCACG GCG CGCGACCAG            TCGCTTCCCGATAGC  64 257
JLK41_RS05860 1276882 .. 1276894 + -10.5  -2.71791   CCGTGGTCCGCGCAG                GCCGC GGC GCGGC                GTTTCGGCCCGGAAT  61 86
JLK41_RS05865 1278561 .. 1278575 +  -5.8  -4.21322   TTTTGACCGTGATAA               TGTTAT GAA ATAACA               TTTCATTTCTATTGG  68 453
JLK41_RS05870 1280610 .. 1280622 +  -3.3  -3.40403   CACCTATCACGTCGG                CCTGG TTG CCACG                TTCTGATGCGCGGCC  47 7
        cobN NONE
JLK41_RS05880 NONE
JLK41_RS05885 1285587 .. 1285614 +  -7.7   -2.6176   GCAGGCGGCTCGTGC        GCAGCCTGCTCG GTCAG CGACCAGGC-GC        CTTGTCCGTCCAGTT  50 337
JLK41_RS05915 NONE
JLK41_RS05920 NONE
JLK41_RS05925 1295292 .. 1295308 +  -8.7  -2.52543   CTCGCTTCACCCGCT              GGGTTGC GCA GTAACCC              TGGCTTGACGAACGT  56 12
JLK41_RS05930 1296624 .. 1296640 +  -3.6  -3.17075   CGCGCCTGGTCGGCA              TCCGTC AGATC GCCGGA              TTGCGTTAGGGGAGC  45 0
JLK41_RS05935 NONE
JLK41_RS05940 1298361 .. 1298395 +  -9.3  -2.57654   GCAAGCCGTCAAGTA     AGCCGCAGCAACC TTTCTTTCC GGTTGTTGCGGCG     CTCTTCTGGCTTCTT  56 159
         cml 1299665 .. 1299680 +  -3.2  -3.21912   GCGGGCGGAGCTGAT              TCGGCC CTGA GGTTGA               TTCGTGCATTGCCGG  45 27
JLK41_RS05950 1300274 .. 1300290 +  -9.3  -3.02144   TCGCTGTGGCTGGCC              GCGCGGG TTG CCCGGGC              TCTTGGCGCCAGTCG  60 123
JLK41_RS05980 1305042 .. 1305065 +  -4.5  -3.27525   CCAGAGCGTGCCGTT          GCCAGAGTA GACAAG TGCCCTGGC           TTGGCTTTCCGACGG  49 41
JLK41_RS05985 1306042 .. 1306056 +  -2.7  -3.59979   CTTGGCGCAGAATGG               CGCGC ATCTG GAGCG               TTTGGCGTAGCGGGG  49 1
JLK41_RS05990 1306917 .. 1306939 +   -12  -3.37761   TATCGCACTGCTTGC           TTCCGGCATG GCG CAAGCCGGAA           TTCCTCTGTTGAACT  72 261
JLK41_RS06010 NONE
JLK41_RS06015 1313309 .. 1313339 +  -3.9  -3.69323   GCGTTCATCATCTTG      CAGCGCCTGCTGCG CACC TGCTGAAGGC-CTG       TTTGGCTGCTGCTGC  51 2
        feaR 1314693 .. 1314719 + -14.5  -3.82603   CTCGATCGAGTGAAA        GCCCCTGTCACC GTCA GGTG-CAGGGGC         TTCTGTTTGCCGGTT  93 116
JLK41_RS06040 NONE
JLK41_RS06045 1319789 .. 1319821 +  -2.5  -3.84406   TGAGCCGCTGTGGGC      CTGCATCGTTGATGC GCT GCAATGACGTGGCGG      TTGTTGTGGTGAGCG  52 38
JLK41_RS06070 NONE
        hpaR 1324963 .. 1324994 +  -9.2  -2.71144   ACCGGGCGAAAGCCA      GCGAGGCGCCGGCC TTGA GGCCGCCGCGGTGC       TCATTGCGCAGGCTC  55 367
        hpaR NONE
        hpaA 1335189 .. 1335199 +  -2.4    -3.727   CTCTTTGCCATTGTT                 GCCG GCG CTGC                 TTTCGATGTCGTAAC  51 376
JLK41_RS06140 NONE
JLK41_RS06145 NONE
JLK41_RS06150 1339504 .. 1339519 + -11.8   -5.5943   CCACTGTGCGACTTG              GCCGCC TGCG GGCGGC               TTTTTTTCATCGTTT 100 44
JLK41_RS06155 1340749 .. 1340773 + -10.7  -3.30243   TGCTGCTCGCTGTAG          GCGCGGCTT CAGCCGC GAGCCGCGC          TTATGCCCGGTACCT  68 49
JLK41_RS06165 NONE
JLK41_RS06170 1344511 .. 1344530 +  -4.9  -5.28942   GACCGGTCTAGGAAA            GACCTGC ATGTGA GCAGGCC             TTTTTCTTTACAGTG  89 82
JLK41_RS06180 1347344 .. 1347356 +  -3.3  -3.41527   CAACTGGAAGAAGCT                TTCGG CGA CCGCA                TTGTCATGACAGTTG  47 247
JLK41_RS06205 1352150 .. 1352163 +  -4.5  -3.86346   CAGTTGGCGTTGAGC               CTGCT ATAC AGCGG                TTTCTAGCAGGCTCA  59 5
        rtcR 1361158 .. 1361172 +  -2.7  -3.29144   TTGAGTGACAGGCGG               CGGCG CACCT CTCCG               TTGTGGAAAAAGTCG  46 152
JLK41_RS06250 1363766 .. 1363795 +  -3.4  -4.18018   TGCCTGGGCGGGGGC       GTTGTCCTCGGC ATTCTC GCGGTGGGCGAC        TTTTCGCTCGAACAG  63 456
JLK41_RS06260 1367684 .. 1367694 +  -6.8   -3.1372   ATCGCCTGAGGTAGC                 TGCC CCA GGCA                 TCTTGCTCACCCGTC  54 65
JLK41_RS06265 1368240 .. 1368264 +  -7.7  -5.54338   TGCTTCTGCTGCGGC          CGGCTGCTGGT TAT ACTCGCCGCCG          TTTTTCTTTTCCTTC 100 103
JLK41_RS06270 1368800 .. 1368834 + -12.8  -4.24404   ACTGACCCGCACGCC     CCCGACCGCCCGTC CGAACAT GACGGGCGGTCTGC     TTTTCAGGTTTGAGT  95 36
JLK41_RS06275 NONE
JLK41_RS06280 NONE
JLK41_RS06285 1371041 .. 1371066 + -11.1  -2.75992   TGTTGACCAGGTTGC         GGTCCACCTCG CGGG CGACGTGGGCC          TGCTCTTCGGTCGCG  60 147
JLK41_RS06305 1377075 .. 1377113 + -25.5  -4.07568   CCTGCGCGGCTGCAA  CG-AAACGGGGCGCCCTG GTGA CAGGGCGCCCCGTTTGCG   TTTTGGCGCCAGGGC 100 114
JLK41_RS06330 1385187 .. 1385199 +  -7.7  -3.57263   AGGTCGGCCAGCGCG                CCTGA GGC TCAGG                TTTGCGGATGGAGGT  64 21
JLK41_RS06340 1387369 .. 1387396 +   -17  -3.49475   CGCTGAACGACAGAA        GGGGTCGCCAAC CCGC GTCGGCGACCCC         TTCTGTGCCCCTCGC 100 35
        kdgD 1393413 .. 1393448 + -12.5  -3.13403   TGCCCTAGGGCCCCC    GCATGCCGTTGTCCC CTCGAC GGGGCAACGGCCCGC     TGTTCGTCGAACCCC  74 51
        gudD 1394845 .. 1394864 + -16.4  -3.54424   GCGTTGAATCGGCAG            GCCCGGCC CCGA GGCCGGGC             TTTGCCAGCCTGCCG  93 34
JLK41_RS06375 NONE
        garD NONE
JLK41_RS06385 NONE
JLK41_RS06390 1400209 .. 1400263 +   -25  -3.35679   ACGCTGCTGACTCCG TTGTAGAGCGGGTGCAACCCGCCGAC CAG GGCGGCGGGTTTCACCCGCCCTGCGG TTCTGAATACGCCGG 100 20
JLK41_RS06395 NONE
JLK41_RS06400 1402359 .. 1402405 +  -8.7  -3.02739   TGTCGCTTTTCACAT CCACCGC-CAGGCCGGATCG ACAAGGCG CGATCCAGCCTGAGCAGTCG TCTGTCTCACTTCAC  60 243
JLK41_RS06420 1407121 .. 1407171 +  -5.9   -3.1505   CCTGAGCAACAGTCT GCAACCGC-CGTCGTCACGCCCGC CTGG GCGGGAATGACGACACGCCGGGGC TTGCTCAGGCGTAGT  50 53
JLK41_RS06460 NONE
JLK41_RS06465 1415087 .. 1415104 +  -9.1  -3.14132   CGCACCCTGGGCACT             GGCCAGT TGCA GCTGGCC              TTCGTCGGACAGGCG  59 173
JLK41_RS06490 1418910 .. 1418920 +  -6.8  -3.20348   ACCCTCGCCCGCCGT                 GGCA ATT TGCC                 TTGCCTATTCATGAG  54 41
JLK41_RS06495 1419823 .. 1419838 +    -9  -3.92542   GGCCCGATCCGTCAG              CTGACC AACA GGTCAG               TTATTTGCCCCTGCA  73 22
JLK41_RS06500 NONE
JLK41_RS06505 NONE
JLK41_RS06510 1421915 .. 1421938 +    -6  -3.30124   CATCCTGCTCGGGCC          GCGCATCCAGG GCC CCTG-ATCCGC          TTATAAGCAGTGGAA  52 7
JLK41_RS06515 1423426 .. 1423444 + -17.4  -5.59655   TTGCTCCTGATTCGA             GCCCCGCG TTT CGCGGGGC             TTTTTTATTCCTTTG 100 60
JLK41_RS06520 1424424 .. 1424442 + -13.1  -4.33248   GCCTGTAACGAAAAA             GCCCGGC ACTGG GCCGGGC             TTTCTTCTGCGCTTG 100 42
JLK41_RS06530 1426534 .. 1426544 +  -3.2  -3.05384   GTGATTGCAGTACGG                 TCGT GAC GCGA                 TTCGGTGGCCGCAGG  43 253
        putP 1428222 .. 1428248 + -16.7  -5.28942   CTGGCTGTAGCCGAA         GGCGATGACTG GCAGA CAGTCATCGCC         TTTTTCTTTGCGCTG 100 46
JLK41_RS06540 1428574 .. 1428590 +  -6.5   -3.8917   GACGGTAGTTCGCAC              CGGCC ATGCGCA GGCCG              TTGTTGTGGTTGGCG  62 82
JLK41_RS06555 NONE
JLK41_RS06560 1434473 .. 1434486 +  -2.3  -3.71848   TCGATCAGGCTCTGC               TCCAG CTCG CTGGC                TTCTTCCTCCAGGCC  51 158
JLK41_RS06575 1437633 .. 1437656 + -16.8  -4.32177   TCCTGCCCATAAAAA          GAAACCCGGC CTAG GCCGGGTTTC           TTTGTTGTCGAATCA 100 48
JLK41_RS06585 1440002 .. 1440012 +  -2.4  -2.62983   CGAGGACTTCCAGTT                 TGCC GGA GGCC                 TGGTATGAGCCTGGA  38 7
JLK41_RS06590 1440227 .. 1440254 + -18.6  -3.52073   CCGCACTACTGATAT        GAAAAAGCCCGG TTTC CCGGGCTTTTTC         TTGTCGTCTTCAGCG 100 29
        aspS 1446228 .. 1446241 +  -5.9  -3.74652   GCGACGGTTCTCATC               TCGGC TTGT GCCGG                TTGTAGTTTGTTTTG  60 148
JLK41_RS06620 1447050 .. 1447076 + -12.3  -5.24129   CGTGCTGGTCAGAAA         GCCGGAAGCGT GCACA GCGTTTCCGGC         TTTTTTGTCGGGCCA 100 51
        ruvC NONE
        ruvA 1448316 .. 1448335 +  -2.1  -3.14848   CGCACTGCGCGGCAT            GGCGT AGGCTGAATG ACGCC             GTTTTCATCCACCGG  43 19
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
        ybgF 1454800 .. 1454816 + -10.8  -4.53034   TCGCTTGGCCACGAA              CCCGCG CTTGT CGCGGG              TTTTGCTTATCTGCG  89 50
        queE NONE
        queC 1456367 .. 1456377 +  -4.6   -3.1364   ATTAAATCAGTATCA                 TGCG CCT CGCG                 TTGGGTCGTTAGCTC  48 71
JLK41_RS06685 1456466 .. 1456483 + -11.3  -5.78622   CACCAAATCGCAAAA             GCCAGTC GCAA GACTGGC              TTTTTTTTGCCCTGA 100 36
        nadA 1457678 .. 1457695 + -12.7  -4.86133   CTGCCAACGAAAAAA             GCCCAGC CAAT GCTGGGC              TTTTTGCTGTGTGTC 100 48
JLK41_RS06705 1461283 .. 1461321 +  -7.4  -2.52516   CGAATGTTCGCGAGA   ACCCGTTTGTGGTCGC ATGGCCG GCGATCACAGACTGGC   GTTCGTCGTCGCGAG  48 505
JLK41_RS06715 1462642 .. 1462660 +  -8.9  -3.14132   ACAGGATGATCGCCG             CATGCGA GGCGA TCGCATG             TTGCTGCGCGACCAC  56 182
JLK41_RS06725 NONE
         fpr 1466070 .. 1466100 + -24.2  -3.14881   AGCGCCTCTGGCAAA       CGAAAAAGCCGCCC ATC GGGCGGCTTTTTCG       TTGGTGCGCGGCTTA 100 40
JLK41_RS06755 1468857 .. 1468870 +  -2.3  -4.74132   TGTCGATATATGTAA               GCGGA TATT TGCGC                TTTTTAATCGAATGT  72 77
JLK41_RS06760 1469580 .. 1469608 + -10.9  -5.08824   CCACGGGCGTGTTGC        GCCGGTCGCTTCG CTA CGAGGTAGCCGGC        TTTTTTGCATGGCCG 100 65
JLK41_RS06765 1470559 .. 1470569 +  -6.8  -3.53224   GGCCGGCGAGGATTG                 GCTG ATG CAGC                 TTTCCGGGCGCGGTG  58 21
        rarD 1471440 .. 1471465 + -11.2  -3.14132   GTCTGCTGCGCAAAA         CGCCGGCCTGA GGTGA TCAGGCCG-CG         TTGATGCGCGAGGGC  69 15
JLK41_RS06785 1474351 .. 1474366 +  -4.6  -3.66378   CCATGGGCGATCAGC              TCGGCG TGGC TGCCGG               TTTCGATGACCTGTC  55 309
        arfB 1478016 .. 1478048 +  -5.6  -3.53091   TGCGTGCGCCGATCT     GC-TGGTCA-CCGCCC AGC GGGCCGCTGATCATGC     TTTCCACCGGCAGCT  54 273
JLK41_RS06815 1481246 .. 1481289 +  -8.8  -3.33969   GAAGCGTGTCCACCG CCTGTCCGGGTGGTGGATG AAAGACG CGTCATCCACCCGG-CGGG TTATCAGATGCCTTG  63 61
JLK41_RS06825 1482596 .. 1482606 +  -2.4  -2.76189   ACCAATCTCGCAGTT                 ACGC GCA GCGG                 TAGTTCAGTCGGTTA  39 37
JLK41_RS06830 1482713 .. 1482728 +    -9  -3.06815   CTCCTGTGACAACGC              TTCGGC GCCC GCCGAA               TCTCTTCGAAAAAAT  60 62
JLK41_RS06835 1483615 .. 1483646 +   -21  -3.55622   CACTGCATGGCTTCA      TGACAACGCCCCGT CTTG ACGGGGCGTTGTCG       TTTCCGGGCCTTGGC 100 41
JLK41_RS06840 1484335 .. 1484345 +  -8.2  -3.21695   TCATCGAGCACCTGC                 CGGC CGA GCCG                 TTGCATTCCTGATCG  57 3
JLK41_RS06845 NONE
JLK41_RS06850 1485164 .. 1485179 +  -4.7   -2.9039   TCCGGGTGTTCGAAT              TCGAC TATCCC GTCGA               TGTCTAGGCTGCTCT  45 3
JLK41_RS06855 1485908 .. 1485925 +  -5.5  -3.04715   CTGGCTCTGGAAGTC             CTCGATC AGGC GACCGAG              CTTTTCGCGCCAGTC  47 269
JLK41_RS06870 1490697 .. 1490715 + -13.8  -3.47403   TGAGCCAGGGCTGCA             GCCCGCGT CTG GCGCGGGC             TTCGTTATCGATTGG  86 38
        ahpC 1491594 .. 1491618 +   -15  -4.63486   CCTTGTGGTGCCCGA          TGCCCGGGCG CGATC CGTCCGGGCA          TTTTATTGCCCGAAT 100 216
        ahpF 1493220 .. 1493270 + -19.1  -3.06492   GCCACAGCTGATCAG CGCGCTGGAACGACAAAGGCCACC CTCG GGTGGCCTTTGTCGT-CATGGGCG TATTGCGGTGACTGC  90 30
JLK41_RS06890 1495393 .. 1495409 +  -2.1  -3.08679   AGTAGAAGGCGGCCC              CGGCCAG GCT CTCGCCC              TGTTCGCTGAGCCAG  42 149
JLK41_RS06925 1501581 .. 1501635 +  -2.1  -5.03145   CGACGCGATCCACGT CAGCGTCGAGG-TGCCGCAGTAGTTCG CGC CTGACCGTT-CGTCGGCTTCGACGCTG TTTTTTCGGCCATTG  78 4
JLK41_RS06930 NONE
JLK41_RS06935 NONE
JLK41_RS06940 1503414 .. 1503452 + -11.7  -2.78384   CTCACTGCCGGCCCA  GCGCC-GCGCAGGAGGCCT GGT AGTCCTGC-GCGCAGGCGC  TCTGGTACAGGCGCA  65 106
JLK41_RS06950 1505497 .. 1505527 +  -5.2  -3.02144   GTCTCGCGGCTCCAT       TCCTCGGCGTCGGT ACG GCCGCCGGTGTGGA       TGTTGGAACCACTGG  47 314
JLK41_RS06960 1507930 .. 1507947 +  -2.7  -4.20696   AAAGAATCCTGTTGA             CCTCA TGTTAAGT TGAGG              TTTTACCCTTGCTGG  60 519
JLK41_RS06970 1508574 .. 1508610 +  -5.8  -3.87815   ATCAGGGGGTAGGGC   GGGTGAAACCCGCCA CATGCACC TGGCGGGCT-CTCCC    TTTCTGCGACTGGCC  62 29
JLK41_RS06995 1515483 .. 1515498 +  -5.4  -3.53811   TGGCGGCTGGTTCGT              C-CAGCG GGG CGCTGCG              TTTGCCGGGCGTGGC  55 147
JLK41_RS07005 1517405 .. 1517424 +   -10  -4.41616   TGGGAGTGCTTCAGG            CGCGACCTC GAG GAGG-CGCG            TTTATTTCAGGACCT  87 121
JLK41_RS07085 NONE
JLK41_RS07090 1538022 .. 1538065 + -16.6  -3.53811   AAGCTCGCCGCTGAA GCGCCTCCCACGGGGCGGGG GCCG CCACGATTCGTGGGAGGGGC TTTAGCCGCGCTGGA 100 71
JLK41_RS07110 NONE
JLK41_RS07115 NONE
JLK41_RS07120 1542757 .. 1542781 + -15.7  -3.78775   GGTAGTCCCGTTCAG          CCCCGCACGGT TTC GCTGTGCGGGG          TTTGCTCATCGACCC  95 36
JLK41_RS07130 1545644 .. 1545659 +  -7.5  -3.16564   TCGGACGGCGTCAGG              CCCGG CACACT CCGGG               TTCATCCACTCGGAG  54 112
JLK41_RS07135 1546198 .. 1546228 +  -4.5  -4.18018   CAGCTCGGCCATGAA       CCCGCCGCTGTAG CCTTT CGACGCCGGCGCG       TTTTCCATCACCCCA  66 296
JLK41_RS07170 1554108 .. 1554123 +  -4.6   -4.2679   TGCGATGGTCGCCAG              GCCGGT AGCC ACCAGC               TTTTCCTGGCCGTTA  65 60
         ung 1556239 .. 1556269 + -14.1  -2.80816   GCCCGCGCTCTGAAG      CGCT-GCCAGAGCGC CTA GCGC-CTGGCCAGCG      TGTCATCGCTGCGGC  73 28
JLK41_RS07220 1562838 .. 1562854 +  -2.9  -2.90496   CCCGGTCTAGACTGT              CCGGG CGCGTTC CTCGG              TACTTTGCCAGCGCA  40 66
JLK41_RS07225 1563722 .. 1563735 +  -9.5  -5.52384   CCAGGCATGAAAAAA               CCGGC AGGT GCCGG                TTTTTTTGATACGCG 100 490
JLK41_RS07245 NONE
JLK41_RS07250 1567993 .. 1568011 + -13.1  -3.30474   CAGCGTGTCAAACGA             CCCCGGC CACGC GCCGGGG             TTCGTCATTCTGGGC  76 52
        gloA 1568472 .. 1568489 + -14.1  -4.73388   GCGTCGATGAAAGAA             GCCCCGC GTCT GCGGGGC              TTTTTCGTGCGGCTT 100 46
        apbC 1580397 .. 1580415 + -13.1  -4.09739   AACAGGCACAAAAAA             GCCCCGC ACTAG GCGGGGC             TTTTCAGCAGCTTAA  89 363
JLK41_RS07320 1581542 .. 1581559 + -14.1  -5.25803   CGCAGGCATGAAAAA             GCCGGGC GCTT GCCCGGC              TTTTTTCTGCCCGTT 100 47
JLK41_RS07340 1585123 .. 1585154 +  -4.4  -4.07687   GGCAAAAAAATAGGT      TCATCG-CGCTTTCC CGG GGAAGGCGGCCTTGA      TTTTCAGGAAGAAGT  61 59
JLK41_RS07370 1591200 .. 1591219 + -16.4  -3.00525   CAGGAATGAAGAAAT            GGGCCCGC ATGT GCGGGCCC             TGTCGTTTCAGCCAG  83 32
JLK41_RS07390 1594210 .. 1594248 + -29.1  -3.54475   GTAGACGGCAGATGC   GAACGAGCCCGGTCGGT GTGCA ACCGACCGGGCTCGTTC   TTGTGTGATCCCCGC 100 54
JLK41_RS07395 1595063 .. 1595076 +  -3.7  -2.52464   CGCTGATCGATACCA               CCTGG TGCC CCCGG                TGCATTCGCCCCGGG  40 35
JLK41_RS07400 NONE
JLK41_RS07405 1596278 .. 1596306 + -22.5  -3.05596   CGTTTCTGAGGGGCG        CGGGCTGCCTGCG CCC TGCAGGCAGCCCG        TTCGATCAGAAGCTC 100 32
        dinG NONE
JLK41_RS07420 NONE
JLK41_RS07425 1601109 .. 1601123 +  -2.7  -2.87132   AGCTTGGCGGCATTT               CCCAC CTGTT GAGGG               TGTATCCGCAACCCG  40 40
        pdxH 1601919 .. 1601954 +  -2.6  -3.17571   ATCGGCCAAAAGCTG    C-CTGTCGGGAATGA GCCAGAA TCGATCCCGATAGCG    TTCAGTTACAGACTT  43 113
JLK41_RS07440 1603482 .. 1603500 +  -9.5  -2.91264   TGCCTAATGAATCGA             GCGCGCT TGTTT GGCGCGC             TATGTGAATGGCCCC  59 34
JLK41_RS07445 1604277 .. 1604298 + -11.5  -2.64735   CTTGCCTCGGGTTCT           GCGGCGCAT CGTG AAGCGCCGC            TGATGTGCCTACAAT  64 58
JLK41_RS07450 1605517 .. 1605534 +  -4.8  -4.26327   TGCGCCCGCACAGGC             CGCTGG GGTTCG TCAGCG              TTGTTTTGGTGCCTG  65 67
JLK41_RS07455 1607030 .. 1607054 + -13.6  -2.72558   GTAATCCGCTTTACC         GGCGGGTG-GC TTCG GCGCACCCGCC          TCCTTCCGAGGTTCT  73 37
JLK41_RS07460 NONE
JLK41_RS07465 1608802 .. 1608826 + -17.1  -5.28176   CGCCGTTTCAACCGA          CCGGAGCCGCC TCG GGCCGCTCCGG          TTTTTTGTGCCTGCC 100 44
JLK41_RS07470 NONE
JLK41_RS07475 NONE
JLK41_RS07480 NONE
JLK41_RS07485 NONE
JLK41_RS07490 NONE
JLK41_RS07495 NONE
JLK41_RS07500 NONE
JLK41_RS07505 1615856 .. 1615877 + -15.1  -2.74192   GCTACGCTTCAGGTC           GCCCGGCTG AGTC CGGCCGGGC            TCCTGTTCAGCGCTC  77 16
JLK41_RS07525 1620941 .. 1620951 +  -3.2  -2.60075   CAGCGGGCCAAGCAT                 CCAG GGG TTGG                 GTTGCTTCAGGCGCC  39 494
JLK41_RS07555 NONE
JLK41_RS07560 1628390 .. 1628409 +  -3.4  -3.28712   TGAAGTGCTGGTAGA            GCAGGTCG AAGC CGACCACC             TTGTCCACGGGAAAC  46 223
JLK41_RS07580 NONE
JLK41_RS07585 1631869 .. 1631881 +  -6.9  -3.71848   CACCCGGTGCTGTGC                GCGCT GCA GGCGC                TTGTTGGTGCGCACG  61 225
        rpoE NONE
JLK41_RS07600 NONE
JLK41_RS07605 NONE
JLK41_RS07610 1636340 .. 1636360 +  -3.9  -3.79138   GTTGTCCTGCGCGCA            TTGCTGGCT GCC AGCCCGTGA            TTTCCTGCGTGTATT  54 5
JLK41_RS07615 1637849 .. 1637866 + -10.5  -4.65895   GGCGAGGCTGAACAG             GGGCGCT TTCG GGCGCCC              TTTTTGCGTGCACGC  89 48
        lepA NONE
        lepB 1640622 .. 1640633 +  -3.6  -2.60392   CTGCCCAACTTCTCG                CGGG TCGG CCTG                 ATTCATTGAGCACTG  40 5
JLK41_RS07630 NONE
         rnc NONE
         era NONE
        recO NONE
        pdxJ 1644178 .. 1644235 + -22.7   -3.4052   CGGCTAGCGGGATTT GTGGGAGGGGCTTCAGCCGCGACTTGC CATG GCCTGTCGTCGCTGAGGCGCCTCCCAC TTCGTTCGATTCAGC 100 34
JLK41_RS07660 1645639 .. 1645658 +  -4.2  -3.21099   GGCAGCGACTGGAAG            CGCATCCAC TCG GTGGC-GCG            TTGCTCCTCCACCGA  45 132
JLK41_RS07680 1649393 .. 1649451 + -10.4  -2.78384   GCCAGTCAGTCCGTA ---GCCCGGATGCGATCCGGGGACTCATG TTGG CGAGCGTTCCCGGATTGCATCCGGGCCAG TGTGCTGGCGCAGGG  61 54
JLK41_RS07690 NONE
JLK41_RS07695 NONE
JLK41_RS07700 1654246 .. 1654263 +  -4.1  -3.04322   AGGGCGAGACCGGCG             TGGTGAT GAGC ATCTCCA              TGTTGCCGCGTTCGC  44 515
JLK41_RS07725 NONE
JLK41_RS07730 NONE
JLK41_RS07735 1661099 .. 1661143 +    -5  -3.20078   GCTGCTGCGTGCCTG GGTCCGTAG-GGTGGACAACGC GAA GC-TTGTCCACCGCTTGGGGGC TGTTCCTGTCGCCTG  48 121
       fadD2 1668524 .. 1668548 + -21.5  -4.10925   TCGCCTGAGCCGAAA          CCTCTCCCCCG GCC CGGGGGAGAGG          TTTTCCCGCCTCTGT 100 33
       fadD1 1670632 .. 1670645 +  -9.5  -5.45652   GCGTTGAACGAAAAA               CCCGC TACG GCGGG                TTTTTTATTGCCCGT 100 48
JLK41_RS07775 1673084 .. 1673111 + -10.5  -2.78384   GCCAGCAGCAGGCCA        CTGGCCTGGGC GCTCCA GCCCAGGGCGG         TGTAGTAGGGCGGCA  57 501
JLK41_RS07790 1675276 .. 1675326 +  -7.3  -2.74523   AAGGCGCGCGAGGAG GAGGCGCAGGGCTAGGT-GGTGCG GCTG CGCTCCTGCCTGGGCCCGCGCCCG TGATATTCCGCGTCG  50 11
JLK41_RS07795 1676460 .. 1676472 +  -3.3   -2.7419   GTCGGTTCGCTGGTT                CGCTA CGC TTGCG                TCGTTCACATGCTGT  41 47
JLK41_RS07805 1678652 .. 1678678 + -20.2   -4.8622   GGCGGCGATAGAAAA         GGGGGCAGACTG AAC CGGTCTGCCCCC         TTTTTCGTTGCGCAG 100 45
JLK41_RS07815 1679957 .. 1679986 + -13.5  -3.28712   TTCGGCGCCAATGGC       GGCGGCAGCTGCC GCGT GGCACGTGCCGCC        TTGTGCGGAAAAAGG  81 68
        hrpA NONE
JLK41_RS07835 NONE
JLK41_RS07840 1686103 .. 1686132 +  -3.5   -2.7566   ACCCAGTGCTGGGTG       GCTGAGACATCTTC ACA GAAGA-GCCCCGGC       TGGTTGCCATTGCGT  41 351
        cyoA NONE
        cyoB NONE
        cyoC 1690580 .. 1690593 +  -2.3  -2.64933   CGTCTTCACCGTCGT               CTACC TGAT GGGAG                TGCTGTAAATGGCTC  38 4
        cyoD NONE
        cyoE 1692164 .. 1692222 +  -7.4  -3.40597   CGGTGGATCGGTGAA GCGCGATCCACCCTAC-GGCAGCGCC TTCAGCTGC GGC-CAGCCTGCAGGGTGGATGTCGC TCTTTGCATCCACCA  56 296
JLK41_RS07895 1697909 .. 1697933 +  -6.4  -3.28447   ACCACGCTGGACTGT         TCCTCGGTGGC CGTG GCCACCT-GGA          TGTTCTGATCGCTGA  53 228
JLK41_RS07915 1701695 .. 1701711 +  -4.3  -4.02132   GCCAGCGCCTGGCGG              CGTTGGG CGT CTCGGCG              TTTCTCGCTTTCCAG  61 296
JLK41_RS07925 1703452 .. 1703468 + -10.8  -2.55351   ACGCGACCTGAGGTG              CCCGCG CTGCC CGCGGG              ATTCGTGTCGGCCGG  60 30
JLK41_RS07930 1704237 .. 1704251 +  -6.4  -3.50045   TTGGCTTCCGCTGCT               GGGTCA GGA TGACTC               TTCTGCTGTCTCAAT  58 198
JLK41_RS07935 1704738 .. 1704774 +  -3.4  -3.69841   TGCTGGCGCAGTAAG    TCGATTGCGCTGCGTC CGGCT GGCGCGGCGCTCACGC    TCTTCTTTCTTCGGG  51 27
JLK41_RS07940 1705572 .. 1705593 +  -2.9  -2.90307   CCGCCGTGGCGCCTC           GTCAGGCGA CATA TCCACTGAC            ATTTCCTCCTCTTCC  40 57
JLK41_RS07945 1707034 .. 1707053 +  -9.2  -3.02511   TACGTGCGTCACTCA            CGCCCGGG CTGG TCTGGGCG             TGTTGCACCGGTCAG  60 51
JLK41_RS07955 NONE
JLK41_RS07960 1710183 .. 1710198 +  -6.8  -2.71364   TGACCTCGCTCAGGC              GCC-GCG CTC CGCAGGC              TACTTCAGGCGGTAG  50 59
JLK41_RS07980 1713708 .. 1713724 +  -4.4  -3.36327   TGACGCTGGGCACGA             CA-CCGC TCTC GCGGCTG              TTGTCGGTGCGCTGC  51 178
JLK41_RS07990 1714951 .. 1714965 +    -7  -2.94806   ACAGATGCCCCAGTG               GCCGGG CGA CCAGGC               TGTCATCTTCGTTGA  51 487
JLK41_RS08000 1716282 .. 1716308 +  -2.3  -3.06831   GCATCGAGGCATCGG        GCGGCAT-GTTC CTCT GAACCATCTCGC         TTGCGTGGCAGTTCC  41 9
JLK41_RS08005 1718011 .. 1718025 +  -5.6  -4.15044   GATATCCAGTGCCAT               CTGCTC GGC GAGCTG               TTTGTTCAGCCGCCC  64 373
JLK41_RS08030 NONE
JLK41_RS08035 1723051 .. 1723074 +  -9.5  -2.64616   AGTGCTTGCAGCAAG          GCCCGGCAG GCGCTG CTGCCGCGC           TCATCTGGATGCAGG  54 386
JLK41_RS08055 1727495 .. 1727532 + -12.7  -3.21218   ACTCTCTTTGAGAAT   GCCTGA-CGCGCGCGGGG CGT TCATGCGTGCGCTCAGGC   TTCATCCTAGGGAGT  74 41
JLK41_RS08060 NONE
JLK41_RS08065 1728387 .. 1728402 + -10.4  -5.54907   GACGATTGAAGCGAA              CCCGGA GTGA TCCGGG               TTTTTCTTTTCTCCC 100 32
JLK41_RS08070 NONE
JLK41_RS08075 NONE
JLK41_RS08080 NONE
JLK41_RS08085 1731264 .. 1731293 +  -8.5  -2.96395   GCGCAGCAGGTAGTG       CTCGGCCAGCTCC TGAC GCAGCTCGTCGAG        TATCTGCTGGTAGCT  55 178
JLK41_RS08095 NONE
JLK41_RS08100 NONE
JLK41_RS08105 1737522 .. 1737534 +  -6.3  -3.25719   GGTCGGCTGGATCCA                GATCT GGA AGATC                TTGGTGGTCTCATCC  53 413
        yegS NONE
JLK41_RS08120 1740069 .. 1740081 +  -6.2  -3.69902   CTGCCCATCCGCCAA                CCCG CTACC CGGG                TTTACCCTGTTTCCT  57 104
JLK41_RS08125 1740987 .. 1741043 + -10.9  -3.69323   GCCGCAGGCCATGAG CCTCG-G-GCTGCAAGCCG-CCGCGCTG TGTT CAGCGCTCATGGCTTGCAGCGCACGCGG TTTCACTGGTCGTCG  77 41
JLK41_RS08135 NONE
JLK41_RS08140 1745850 .. 1745907 +  -3.5  -4.64144   CTGAGCAACGAAGCG C-CGCCAG-TTGTGATCTCCCGCGGCTCA GCGA TGTG-CGCGGGAGA-CAGGATCAGGCGTG TTTTTCCGGCTTCTT  70 37
        fadB NONE
        fadA 1751148 .. 1751178 + -13.3  -4.66264   TAAGCGCTAGCGGAC       ACGAAACCGGGGC CCAGT GCCCCGGTTTTGC       TTTTTACGGCTTTTC 100 38
JLK41_RS08165 NONE
        topA NONE
JLK41_RS08175 1754920 .. 1754945 +  -3.1  -3.08438   GGTTTAACTGGACCA         GTGGGCTGGGG GTGA CCCCGACTGAC          TGTTACAATGTCGTG  43 44
JLK41_RS08180 1755237 .. 1755269 + -22.1  -3.86015   ACGGCGATGAATCAA      CGAAAACGGGGCTCC AGT GGAGCCCCGTTTGCG      TTTCTGGGAAGCGTC 100 44
JLK41_RS08195 NONE
JLK41_RS08200 NONE
        nagZ 1758896 .. 1758906 +  -2.4  -2.79289   GCTGGATTGAGGAGG                 GCAC CAT GAGC                 GTTCTTGCCATCATC  39 31
JLK41_RS08210 1759668 .. 1759684 + -15.1  -4.21462   GCTGCAATGAAAAAA              GGGCCGC TCA GCGGCCC              TTTTGCGTCATGCCT 100 55
JLK41_RS08225 1765288 .. 1765305 + -12.7  -5.24129   CGGGGTGTGACAAGA             CGGGAGC TTCG GCTCCCG              TTTTTTATGCGCGGC 100 45
JLK41_RS08230 NONE
JLK41_RS08235 NONE
JLK41_RS08240 NONE
JLK41_RS08245 1769630 .. 1769648 +  -2.3  -3.13899   CAAGATGGCGCCTCA             GGTATCC AGCAA GGAGGCC             TATTAATGGAACATT  43 1
        nqrE NONE
        nqrF 1771521 .. 1771566 + -18.3  -3.23274   GAGGTCAGCTGTACT TCAGCCCGTTATCGCTGTCGC CCTG GCGGCAGCCCTAACGGGCTGC TTGCATTCTGAACGG  90 45
JLK41_RS08260 NONE
        nqrM NONE
        sthA 1774364 .. 1774379 +  -8.2  -5.22312   GCAGCAACGAAAAAA              CCGGCT CATG GGCCGG               TTTTTTCATGTCGGT 100 141
JLK41_RS08290 1777500 .. 1777514 +  -2.7  -3.36878   CGCGCGTACCCAGCC               CGCCG AGGCC CTGCG               TTATGAGTGAGTCCA  44 1
        lolD NONE
JLK41_RS08300 NONE
JLK41_RS08320 1783969 .. 1783998 +  -5.7  -4.56597   GGCGGCGGTCGGCGG       GTGAC-CCACCCTA TGC TAGAGTGGCGCCAC       TTTTTCGAGGGGGAA  74 45
JLK41_RS08325 NONE
JLK41_RS08330 NONE
JLK41_RS08335 NONE
JLK41_RS08340 NONE
        kdsB 1787046 .. 1787066 +  -3.2  -3.54408   GGTTCGTCACCTGCT            GGGGGCCT GATGA AGGTTCTC            TTCGTTTGCCTGGGC  49 16
JLK41_RS08350 NONE
        murB 1788602 .. 1788621 + -13.6  -4.65895   AGCGGACATGAAAAA            GGGGATGC CTAG GCATCCCC             TTTTTGCGTACCGCC 100 92
        rluC NONE
JLK41_RS08370 NONE
        sppA 1794878 .. 1794933 + -32.8  -2.87344   CGCTGAGGAATGCTC CCGTAGGGCGGGTGTAATCCGCCAGTC TCG GTC-GGCGGGTTGCACCCGCCCTACGG TATCTCCACGCCCTC 100 35
JLK41_RS08385 NONE
        rpmF NONE
        plsX 1797432 .. 1797457 + -10.3  -4.62069   TCCAACTGTCAGTTT         GCTGCGCCAGG CTCG CCTGGCGCTGG          TTTTTCGACTCAAGG  89 101
        fabD 1798402 .. 1798412 +  -2.4  -2.52795   CGCCTTCGCTGCCGC                 TCGC GCT GCGC                 TGGCTTGAAACGGTT  37 7
        fabG 1799343 .. 1799356 +  -2.3  -3.92522   ATACACTTGGCCGCT               ACCAG CTGC CTGGA                TTTGTCCAATTAGGA  54 180
        acpP 1799650 .. 1799677 + -10.6  -4.90778   TTCTGACCGAGAAAA        GCCGCACTGCC CTAAACA GGC-GTGCGGC        TTTTCTTTACGTGCA 100 54
        fabF 1800959 .. 1800973 +  -5.6  -3.21747   CGGCTCGCTGCTGTT               CCGTCG GTT CCACGG               TTGATGCTGAGCTGG  50 7
        pabC NONE
        mltG NONE
JLK41_RS08430 NONE
JLK41_RS08435 1804525 .. 1804535 +  -2.4  -2.94144   CATTCTGCTGGCTGT                 GGGC CAT GCGC                 TGGTTTGCGTAGCAG  40 72
JLK41_RS08440 1805001 .. 1805017 +  -4.4  -4.87893   AGCGACAAGAATGCG             GC-AGCG CTCC CGCTCGC              TTTTTACTTGGGCTT  81 66
JLK41_RS08445 1806275 .. 1806287 +  -6.9  -3.28712   GGCTGAAGTTGAGGA                TGCCG GCC CGGCG                TTGTGCCACGAGCGG  54 458
JLK41_RS08455 1807934 .. 1807976 +   -17  -2.78463   GCGCGACGCCTGACC CCTGCATGTCGGCCATGGGA ATG TCCCGTGGCCGACATGGCGA TATACTCCAGCCCAT  84 28
JLK41_RS08460 1809060 .. 1809078 +  -2.4  -2.90714   TGTGCGGGCTTTCCC             TTTGCG AGTGTGC CGCGAA             TGTCTGCCCGTTTCC  40 106
JLK41_RS08465 1809981 .. 1809993 +  -3.3  -2.92463   CTTTGAACAGCCTGG                CGCAG AAT CTGCA                TCTATGCCTCATCCG  42 35
JLK41_RS08470 1810637 .. 1810647 +  -3.2  -2.52464   GCAGCCTGATCGGTC                 TCGG CCG CTGA                 TCCGTTGCACAGGGC  40 15
JLK41_RS08475 NONE
JLK41_RS08480 NONE
JLK41_RS08485 NONE
JLK41_RS08490 1813730 .. 1813740 +  -4.6  -3.71998   CGAAGCCGCCGTACT                 TGCC CTG GGCG                 TTGTGTTCGTCGATG  55 326
JLK41_RS08500 NONE
JLK41_RS08505 1818036 .. 1818053 +  -3.3  -3.37796   GCGGGCAAGATTCAG             GC-GCTCC ACT GGCGCTGC             TTGTCCATGATGAAA  47 42
JLK41_RS08515 1819864 .. 1819875 +  -4.4  -2.84051   TCCCCAACCACAGGA                GCAT CACC ATGC                 CTTTCGTCAGCGTAC  45 87
JLK41_RS08520 1820137 .. 1820162 + -19.1  -3.25823   GCGCCTGCGAGCAGA         CAGTGCCGGTC GTAT GACCGGCACTG          TTCATCTGACGGCCA  91 81
JLK41_RS08535 1823306 .. 1823321 +  -5.4  -3.55444   GGGCAGAAATGGCGG              CC-GCCA TAC TGGCCGG              TTTCGCCGCTCAGGG  54 256
JLK41_RS08545 1823894 .. 1823912 +  -6.6  -3.60792   GTTGCCCTGTATCAT             CGGCGGCA GAG TGTCGCGG             TTTCAGCATTGACCG  60 70
JLK41_RS08550 1826166 .. 1826183 +  -4.8  -3.71848   TCGTCGGCGAGGATG             GTGCTC TTGATC GAGCGC              TTGTTGGTCACCAGG  55 492
        gspE 1830215 .. 1830249 +  -7.1  -3.57144   GGCTGCAGCGGAATG    CCGC-CCAGCCGCTTCC ACG GGAA-CGACGGGAGCGG    TTTGCCGATGGCGGC  60 104
        xcpS NONE
        gspG NONE
        gspH NONE
        gspI 1832849 .. 1832873 +  -4.2  -3.58343   GGTTTTCTCGGGGCG          CCGCGATG AGGTACGGG CAGCGCGG          TTTCACCCTGCTGGA  54 17
        gspJ NONE
        gspK NONE
        gspL NONE
JLK41_RS08605 1836175 .. 1836216 + -15.7  -3.28924   CGGCGCGGGTTCGCT CGCGCGTGCCGGCAGGGCT TGAT GGCGCAGTCGGCACGCCCG  TTGTCCCGACAGGTA  89 44
JLK41_RS08610 1837425 .. 1837455 + -11.3   -5.5604   TCGCAGATGGACAAA      GTGGCACTAACCTT CCCG GAGGTT-GTGCCAC       TTTTTTCTTGGTTCA 100 45
JLK41_RS08615 NONE
JLK41_RS08620 NONE
JLK41_RS08625 NONE
        argR 1841162 .. 1841176 +  -7.8  -2.86271   TCGGGCGCTTTGTCG               CCGGTC TGC GACTGG               TACTTCTCATCAGGA  55 325
JLK41_RS08635 1842439 .. 1842482 + -12.4  -3.73224   TTTGCGGGCTGATAC CGGGAGGGGGCTGGTC-GC GACAGCG GCTGGCCAGGACCCTCCCG TTTCATCGCCGATCC  85 44
        aruF 1843591 .. 1843628 +  -2.6  -2.62396   GCCCTGCTCCGGTAG   CAGAGGGCGCCCTT CGGGGCGGGT GAGGGTGCCGTCGG    TACTCTCGAGGAATC  38 44
        astA NONE
        astD 1846180 .. 1846194 +  -2.7  -2.63301   CCTGCGACCCTGACC               CCGGG AGTGA CCCTG               TGATGTCCGCCTATG  38 8
        astB NONE
JLK41_RS08660 1847847 .. 1847883 +  -2.3  -2.62184   CCACTGATCGTCGAG  C--CATGTAGGCGCG-GC TGCC GCTCGCGCCTGCACGAAG   TGCTGTAAAGCAAGG  38 34
        astE 1849068 .. 1849082 +  -3.4  -3.04715   GGACAGTCGGCTCGC               TCGCCG TTC CGCCGG               ATTTTGCGCCAACTG  43 174
        ltaE 1850378 .. 1850391 +  -2.3   -3.3452   CCTACCTTGCCTGAC               CGTCG CTCG CCACG                TTCTCGCGTCGTCTG  44 235
        alaS 1853128 .. 1853138 +  -8.2  -3.72695   GCCTTGGCAGTATGA                 CCCG ATG CGGG                 TTTAATGGGCGCCCT  67 77
JLK41_RS08680 1854424 .. 1854453 + -19.4  -5.47218   GGCGAGTGATCTATC       CGAAAGGCGCGG CTGGTT CCGCGCCTTTCG        TTTTTTTGACTGGCA 100 32
        csrA NONE
JLK41_RS08690 NONE
JLK41_RS08695 1855096 .. 1855117 + -13.1  -4.86731   GTCCGCCATATTCAA           TGGCTTGCA TCGC TGCAAGCCA            TTTTGTTTCAACCAG 100 33
JLK41_RS08700 NONE
JLK41_RS08705 1855431 .. 1855452 + -15.9  -5.27938   TCCGCCATACCAAAA           GGGCCTGCA GCGA TGCAGGCCC            TTTTTCTTTGCGCGT 100 34
        mgtE 1857730 .. 1857749 +    -7  -3.41745   CTGTAGATCGCGCCA            CCGCCCGG CCAT TCGGACGG             TTCGTGTTCTGCGAG  58 35
JLK41_RS08720 1858436 .. 1858450 +  -8.5  -3.18681   CGCCATTGCCCAGCA               CCGCG CGCGT CGCGG               TTGATCAGGTTCAGA  57 7
        oadA NONE
JLK41_RS08730 1861440 .. 1861454 +  -9.2  -5.54894   GCAGGCATAAAAAAA               CCGGCT CAA GGCCGG               TTTTTTTCATGGGTT 100 62
        phnC 1863053 .. 1863066 +  -2.3  -3.02144   ACGCCAACCCGCAAC               AGGAG TGTG CTCCA                TGTTCAAACGCATCG  41 67
        phnD 1864073 .. 1864102 + -17.1  -3.09491   CGCCGGCTGACCCCG       AGAGCCGTCCCGC CCTG GCGGGGCGGCTCG        TTCCGTGAATCTGTC  87 31
        phnE 1865064 .. 1865081 +  -9.8  -4.08767   TCTGAAGGAGAAGGA             GGGCGC CTGTGT GCGCCC              TTTTCGAACGATGAA  80 36
        phnF NONE
        phnG NONE
        phnH NONE
JLK41_RS08770 NONE
JLK41_RS08775 NONE
        phnK 1869719 .. 1869775 +  -2.8  -3.07029   CATCCACCCTACGAC AGATGGGCGT-TTCTCCCCTCTCCCGC GACT GGGGGAGGGGGCAGACCGTGCCTAGCG TATTCGAGGTGTTTA  41 125
        phnL NONE
JLK41_RS08790 NONE
        phnN NONE
        phnP 1873363 .. 1873382 +  -9.3  -2.52464   AACGCTGTGGTGGAT            GGGTGGA GCGTCA TCCACCC             TAGGTTCGGGCGCCC  56 429
JLK41_RS08820 NONE
JLK41_RS08825 1877668 .. 1877684 + -10.1  -2.57132   TCAGTAGGTTGTTCA              TCCGGGG CAT TCCCGGA              ATTCTGGAAGCGCGA  60 133
JLK41_RS08830 1878793 .. 1878810 + -14.1   -4.8048   CTACAATCGCCCCCG             CGCCGGC CCAT GCCGGCG              TTTTTCATGTCACCC 100 145
JLK41_RS08835 NONE
JLK41_RS08840 NONE
JLK41_RS08845 1882272 .. 1882299 +  -6.8  -3.08798   GACTGCGGCGGAATG        CCGCCCAGCCGC TCCT GCAGATGGGCGA         TGTTGACTGAGCGCT  52 83
JLK41_RS08855 1884474 .. 1884484 +  -3.2  -2.52516   GGTGCACGAGGCTCA                 TCTG GAG CAGG                 CTTCGTGATCGCGGC  40 7
JLK41_RS08860 1884967 .. 1884984 +  -2.6  -2.65223   CCGCAAGCCATCTTG             AGAGCG GCTCTG CGCTCG              GTTGTCATGAGGTTG  38 177
        hppD NONE
JLK41_RS08870 NONE
JLK41_RS08875 1888415 .. 1888425 +  -6.8  -3.53761   CTGCAGCCGCTCCCA                 CGCA GGT TGCG                 TTTCGAAAGGAATTC  58 96
        maiA 1889102 .. 1889117 +  -4.7  -3.17392   CTCAGTGACACCTCC              GGCTT TCATCC AAGCC               TTGCATTCCGCCGTG  48 33
JLK41_RS08885 1890673 .. 1890698 + -16.9  -4.99134   TAGGGTGTCAGCCAA         GGCGCAGCTTC TGAT GGAGCTGCGCC          TTTTTCATTTGCCGT 100 52
JLK41_RS08890 NONE
JLK41_RS08900 1893848 .. 1893862 +  -2.7  -3.12895   TGCCGGCCAGGGTCA               GGGCC AGGGC GGCCA               TCTCTTCCTCACGGC  44 157
JLK41_RS08930 1899336 .. 1899364 +  -3.8  -4.16842   GGGCCTGGAAGGCTG       GCCG-C-GACCGCC GAG GGTGATCAGGCGGC       TTTCTTACCGATCAG  62 6
JLK41_RS08945 1901304 .. 1901330 +  -9.4  -3.83318   GGCTACGGTGGTGGC         GGGGGCTTGG GTCATGA CCGAGCCTCC         TTCTCTTCTTGGGAG  71 299
JLK41_RS09025 1909715 .. 1909735 + -14.7  -3.06796   GGCTGTTGAGGGCAG            GGCCTGTGC GGA GCACGGGCC            TTGCCTGGGGTGCGG  80 346
JLK41_RS09030 1910488 .. 1910505 +  -3.3  -2.89564   CGTGAGGCGCTGGCA             GGGCATG ACTG CGTGACC              TGTATCGACTGCCAG  42 168
JLK41_RS09035 NONE
JLK41_RS09040 1911471 .. 1911489 +  -3.8  -2.93435   GCCTGAACCAATGTG             GCGACG ATGAGCG CGTTGC             TCTGTACCTGGTTGA  42 52
JLK41_RS09045 NONE
JLK41_RS09050 1914664 .. 1914681 +  -9.8  -5.72622   CGGCTTCTCAACAAA             CCCGGC CACCGC GCCGGG              TTTTTTGTTTATGGC 100 463
JLK41_RS09055 1915252 .. 1915287 +  -2.4  -3.08015   ATGTTTTTGCAGATA    GACGGGCGCATAGG-GG GTT CCGCTTCCGGGCCTGTC    TATTCCGGTGCTTGG  41 91
JLK41_RS09060 NONE
JLK41_RS09065 NONE
JLK41_RS09070 NONE
JLK41_RS09075 1919629 .. 1919644 +    -6  -2.63073   ACCTCTGTTGCTGGA              GCCGGC GTAT GCCCGC               GTGTTCTTCAGCGCG  46 87
JLK41_RS09080 NONE
JLK41_RS09085 1921265 .. 1921279 + -12.8  -4.98531   CAACACCTTTCCCAA               GGCCGC TAA GCGGCC               TTTTTCGTTTCAGGA 100 48
JLK41_RS09090 NONE
JLK41_RS09095 NONE
JLK41_RS09100 NONE
JLK41_RS09105 NONE
JLK41_RS09110 NONE
JLK41_RS09115 NONE
JLK41_RS09120 1924884 .. 1924903 +  -9.2  -3.61268   GACGTGGAGTGATCG            CCCGGCCA AGGA TGGCCTGG             TTTCGGCGTTGGCTC  68 29
JLK41_RS09125 1925342 .. 1925355 +  -9.5   -5.4505   CGCAAGAACACGCAA               CCCGC TTCG GCGGG                TTTTTTATTGCCCGG 100 44
JLK41_RS09130 1925716 .. 1925726 +  -4.6  -3.21099   TAAGTTGGCTTGCCA                 GCTG GTT CGGC                 TTGGTCATCACGGCG  48 51
JLK41_RS09135 1929164 .. 1929189 +  -7.6  -5.24129   CCAAGCATGCGCCGT         CGATAGCCCGC CCAGT GCGGGCT-TTG         TTTTTTCTGGAGCCC 100 20
JLK41_RS09140 NONE
JLK41_RS09145 NONE
JLK41_RS09150 1931890 .. 1931909 +  -2.8  -2.50816   CGTGTTCGGAGTGCC            CGGCGATGT ATG ACAGC-CCG            CTTAATGACTGGCGC  37 13
JLK41_RS09155 NONE
JLK41_RS09160 1934268 .. 1934283 +    -6  -3.31726   CATGTCGTTCCCGGT              GGGCTG ATAG CCGCCC               TGTTCTATCCCGAAA  52 19
JLK41_RS09165 NONE
JLK41_RS09170 NONE
JLK41_RS09175 NONE
JLK41_RS09180 NONE
JLK41_RS09185 NONE
JLK41_RS09190 1937474 .. 1937490 + -10.8  -5.28176   TCGCTCTACCTCGAT              GCCCGC CCCGT GCGGGC              TTTTTTGTGCCTGGA 100 52
JLK41_RS09195 1937944 .. 1937954 +  -4.6  -2.75183   CTTCTTCAAGGAGGT                 GCCG TGA TGGC                 TGCTTGGCTGAAGCT  43 19
JLK41_RS09200 NONE
JLK41_RS09205 1938758 .. 1938805 + -10.4  -3.40403   TTGAACTCGCGTACG CGCCGATCACCCGACAGGCCCAG CAG CTGGGCCAG-CTTGCGGTCGGTG TTGTACTCGGGGAAG  65 151
JLK41_RS09215 1940210 .. 1940223 +  -3.7  -4.42513   TTGACCTGCCGGCCG               GCGCG GTTG CGCAC                TTTCTCTTTCTCGTT  68 382
JLK41_RS09230 1942300 .. 1942323 + -12.4  -5.15969   GACTAGGAATGAAAA          GGCCTGGACA GCTA TGCCCAGGCC           TTTTTTGGCTTACAG 100 35
JLK41_RS09250 1945303 .. 1945335 +  -2.7  -2.80492   CAAATCCTGCGCGAT     ACCGCCTGCACAAC GTTCAA GTT-TGCAGGCTGC      TAGTTGATGGTGCTG  39 58
JLK41_RS09255 1948615 .. 1948631 +  -4.3  -2.94232   CTGTCGGTCGGTATC              GGCTACC AGT GGTGACC              CTTCTTTCCCGAGAG  45 11
JLK41_RS09260 NONE
JLK41_RS09265 NONE
JLK41_RS09270 1952047 .. 1952074 +  -5.4  -2.71712   GTACGCGACCCTCAC        TCAGCACACGGC GCAT GCCCTGGGCTGC         CTTTCCCGCCCAGCC  45 284
JLK41_RS09280 1954873 .. 1954887 +  -4.2  -2.96274   ACCGCGATTTCGTGG               CGCTGA GCG TTGGCG               TGTCATTCTGAGCGG  45 0
JLK41_RS09285 NONE
JLK41_RS09290 1957650 .. 1957665 +    -6  -3.59979   ACAAGCAGTGGGTGC              CGCCGG CCAT CCAGCG               TTTGCCATGAGCAAC  57 0
JLK41_RS09295 1959586 .. 1959599 +  -3.7   -4.1899   CGAACAGCAGGTGCG               CCGTG ATAT CCCGG                TTTTCCGTGCGCTCC  65 513
JLK41_RS09305 1961664 .. 1961686 +  -5.5  -2.64794   GCTCCACGTTCCTGA          CGGCC-GCCT GGCG GGGCAGGTCG           TCATCTCGCATTGAA  46 59
        hmgA NONE
        fahA NONE
        maiA 1965118 .. 1965130 +  -4.7  -3.07816   TACCACTTCTGACGC                GACGC TCG GCGGC                TTGCCTCAGTGGCCG  46 128
JLK41_RS09340 NONE
        dinB 1971375 .. 1971392 +  -6.2  -2.75992   TGTACCTGGCCCAAT             GCGGCG AGGAAG CGCTGC              TCCTGTTCCATCAGG  47 178
JLK41_RS09370 NONE
JLK41_RS09375 1978291 .. 1978326 +  -3.2  -4.25458   GTAGCGTCGGCCATC    GAGGTTGTAGGCGAAG TCCT CTTCGGTGGTGACCTC     TTTGTTGGTGACGTT  63 197
JLK41_RS09385 1981775 .. 1981792 +  -6.9  -3.14564   GTGAAGCCAGCGCCT             GCCGCTG CGGC CATCGGC              TTCATCACGCCATGA  54 37
        cysM NONE
        rlmD 1984186 .. 1984200 +  -6.4  -4.02051   TCGGTGTCGCAGGGA               TGTGCA GGA TGCACG               TTCTTTCAGTTAATC  68 62
        relA 1986541 .. 1986593 + -12.8  -3.66178   AGCGGCAGGCCTCGA GCAACAAGCCGCAAGTGAAAGGTGG TCCG CCG-CTTTCTCTTGTGGCTTGAAGC TTTCAGCTTGCCGCC  82 40
        mazG 1987433 .. 1987443 +  -4.6  -3.21925   AAGAAGCTGGAGAAG                 CTGG CGC CCGG                 TTGCTGATCGGGTAT  48 8
JLK41_RS09410 1988181 .. 1988225 + -14.5  -3.04144   CCGAAGCTGGCGCCT GCGTCCTGCG-GTGTGATCGCC AGCA GGCGATC-CATGCGCAGG-CGC TGTTCGCCGTCGGCC  74 90
JLK41_RS09425 1991258 .. 1991275 +  -4.1  -3.15544   GAGCTGATGCCGCGC             GGTGC TAGACTGC GCACC              TTGCTGACAGTGAGG  45 34
JLK41_RS09430 1991592 .. 1991609 + -12.7  -5.01811   CCAGGCATAAAAAAA             CCCGCCT TGAC AGGCGGG              TTTTTGATTTGGTCG 100 83
        moaB NONE
JLK41_RS09455 1994539 .. 1994567 + -19.6  -3.11634   CTGGGCTGAGCGACA        CGCGCCCGGCCA TTGCC TGGCTGGGCGCG        TTAGATGGTGTGGCG  90 32
JLK41_RS09460 NONE
JLK41_RS09465 NONE
JLK41_RS09470 1996518 .. 1996538 + -14.7  -3.59432   GCGTTGTCCGGCCAG            CGCTCCGGT TGC ACCGGGGCG            TTCGTGTTTTCTGTC  90 300
        cobO NONE
JLK41_RS09480 1998554 .. 1998564 +  -2.4  -3.07816   CCAATCCGGAGGCGG                 CCGC CGC GCTG                 TTGCGTCCATGAGCG  41 3
        bluB NONE
JLK41_RS09490 NONE
JLK41_RS09495 NONE
JLK41_RS09500 NONE
        cobU NONE
        cobT NONE
JLK41_RS09515 NONE
JLK41_RS09520 2005508 .. 2005527 +  -3.5  -3.21276   GCTGCTGGTCCTCGC            GTTGAGC CTCTGA GCGCAAC             TGTTATGCCGACACG  45 13
JLK41_RS09525 NONE
JLK41_RS09530 NONE
JLK41_RS09535 NONE
JLK41_RS09540 NONE
JLK41_RS09545 2010150 .. 2010169 + -10.6  -2.52464   CAGCTGGAGTCGTCG            GGCGCGCC CTGA GGAGCGCC             TGCGTTGAGCGAGCA  60 14
JLK41_RS09550 2012364 .. 2012381 +  -5.5  -3.65314   CAGGATCAGGTCGTA             TGCATGC TGGC GCAGGCA              TTGTTCCGCCTTCGC  57 467
        gdhA 2017302 .. 2017316 +  -5.6  -3.37796   CGGGCGGGCGATTCA               GGCATG CTG CCTGCC               TTATCGCTCGTCACG  52 72
JLK41_RS09580 2018033 .. 2018062 + -17.9  -3.18912   GGAAGGTCTGAACAA       GCGGCCCGTGCCTG CAA CGGGCA-GGGCCGC       TTCGTCGCTCAGTGA  90 30
         rnd 2020391 .. 2020403 +  -3.3  -2.82015   CAGCGAAGGAGAATC                CGCGT GAA ACGCA                TCTGCTCGATCTACA  41 19
JLK41_RS09595 NONE
JLK41_RS09600 2021639 .. 2021681 +  -3.4  -4.37092   CCTGCCGTTCGCCCC GCGCGGC--T-TGGCCCGGGC GGGC GCACGAGCTAGACTGCCGCGC TTTTCTCCGCCGAGT  65 41
JLK41_RS09605 2022163 .. 2022221 +   -13  -2.62263   CGCGCGGGTTGATCG CCTCGCCACTTCGTGGCAAATCTGTCGG GCG CCCATGGAATTGCCCCGGGGTGTCGCGG TCATATGCCGCCAGT  68 29
JLK41_RS09610 2023517 .. 2023531 +  -3.6   -3.3482   ATAACTGCTATTAAA               TGATAG TTA TTATCA               TTAATTGGCGCCTTC  47 56
JLK41_RS09615 NONE
JLK41_RS09620 2025150 .. 2025168 +  -5.9  -3.02144   CGTCTTCCATGCCAA             CCACCTC ATGCC GTGGTGG             TGTTGCAAGCAGTGG  49 81
JLK41_RS09625 2027787 .. 2027810 +    -8  -3.51406   CTTGTGCGTGACCTT          GCTGCCAGAG CCGG CGCTGGCCGC           TTCCTCTTTCTGGTA  60 83
JLK41_RS09635 2028545 .. 2028558 +  -3.7  -3.73402   GCGGATCACCTGGGC               GGCCG TCCT CGGGC                TTTCCTGCAGCATCT  54 103
JLK41_RS09660 NONE
JLK41_RS09665 2035425 .. 2035437 +  -3.4  -3.15544   GCCAAGGAGAATTGA                TTCG ATGTG CGAA                TTGCTCGGCATGAGC  45 26
JLK41_RS09670 NONE
JLK41_RS09675 2036815 .. 2036830 +    -6    -3.214   GCACTGGTTCGCCTG              CGCGGC GGGT GGCGCG               TGTTAATGTAATACG  50 97
JLK41_RS09680 2037982 .. 2038011 + -19.3   -4.4078   CCGGGCAAGGAAAAA       CGCCGCGACACCT GTGA AGGGGTCGCGGCG        TTTTCGTTGCGGCCG 100 66
        cysK 2041420 .. 2041446 +    -8  -2.82516   AAGGGCCGTTGCCGT         GGCTGCGC ATGGATGATTG GCGCAGCC         TGTGCTGATGGCCAC  53 51
        aceK 2044410 .. 2044437 + -14.2  -2.90075   CCAGGCCTAATCTCA        TAGGAGAGCACG CCAG CGTGCTCTCCCA         TCTACTTGGCAGGAG  75 66
JLK41_RS09760 2057397 .. 2057422 +  -7.5  -2.96517   ACGTAGAAACCACAC         CTGGCGCAGGG ATTT CGCTGTGCTAG          TACTTATTCATACGT  51 68
JLK41_RS09765 2059040 .. 2059090 + -10.2  -3.14564   GCTTCAACCGCTGAG CGAGAGGCCGCGTGCAGCCCGG TATGCAT CCGGGCTGCGCGGCGCGTGGCG TTCATGGCACACTGC  65 27
JLK41_RS09770 2060053 .. 2060074 +  -5.1  -3.29144   GATGGTGTAGTCGTA           GGCCGTG AACTTGAC CATGGCC            TTCTGCCCCGGGTGG  51 374
JLK41_RS09790 2073490 .. 2073515 + -20.5  -4.45485   TCTCAACTAGAGTAG         GCCCGCTGCCA TACT TGGCAGCGGGC          TTTTCTACGTGTGGT 100 79
JLK41_RS09795 2074140 .. 2074167 +  -5.6  -4.13767   TTGTCGCTTTCCTGA        TCGATGGC-CC GGATGTA GGTGCCGTCGA        TTTTCAGATAGGCCA  64 279
        recQ NONE
JLK41_RS09825 2081306 .. 2081316 +    -4  -5.24449   GTTATGGCTAGCTGG                 CTAA TAA TTAG                 TTTTTTACCTTTGTA  84 107
JLK41_RS09830 2081760 .. 2081791 +  -2.2  -4.66609   CCACGCGCGGGTGCT      GGCCAACCTGGT GAAATGAG ATCTGGTTGGCA       TTTTTCCGTCCACTC  68 7
JLK41_RS09835 2084169 .. 2084200 + -27.4  -3.16564   GTTCACCGTGCTAGC      CGACCAGGCCGCGC TCAT GCGCGGCCTGGTCG       TTACTGGCGTCAGAA 100 45
JLK41_RS09845 2086767 .. 2086779 +  -3.3  -2.60496   GAGAGCCGTGTATCA                GGAGT TTT ACCCC                CTCTTTACACAGGGC  40 39
JLK41_RS09850 2087471 .. 2087498 +  -5.6  -3.08679   GCTGATGATCAGCAA       G-CCACCC-GCG AGCATG CGCAGGGTGGGC        TGTTCGCTGAACAGC  49 128
JLK41_RS09870 NONE
JLK41_RS09875 2091548 .. 2091562 +  -5.6   -3.4489   GGCCGCCTGGTTGAG               CGCCTG GAT CACGCG               TTCCTTGTCGAAGTT  53 126
JLK41_RS09895 2095461 .. 2095479 +  -5.2  -3.14132   GTCCTCGTCCAGGCG             GTGGCGGT TGT ACTGCTGC             TTGATCACCGCGCGC  49 344
JLK41_RS09910 NONE
JLK41_RS09915 2099653 .. 2099708 +  -8.8  -2.52464   CCGTGGTCGCGCACG CTC-AGCAGCAGGCGCTGTTGCTGGCG CTG CACCCGGATCAGCACCGGCTGCTCGGG TGGATTGAAGCGCAG  51 258
JLK41_RS09945 NONE
JLK41_RS09950 NONE
JLK41_RS09955 2105843 .. 2105855 +  -2.6  -3.86822   GTACATCCCCCCGGA                CGCC CTGGA GGTG                TTTCTCGAAGCGTTC  54 161
JLK41_RS09960 NONE
JLK41_RS09965 2107525 .. 2107547 +  -9.8  -3.85389   CATTTGCTAGACTGC           CGGGCCGCAT TTA ATGTGGCCCC           TTTCACTTCTTGCCC  78 53
        scpB 2108358 .. 2108390 + -17.7  -2.87132   CGAGCCCGAGCCACG      GCCGGCGGCGGAC GACTGAG GTCCGCCGCCCGC      TGTATCAACCGGCGA  86 7
JLK41_RS09990 2112621 .. 2112638 + -11.3   -4.8622   CTGAGTGATGAAAAA             GGGACTC CATG GAGTCCC              TTTTTCATTGCCGGC 100 37
        mtnA 2118717 .. 2118759 + -11.3  -4.00782   AAGCGCCTGCACTAA GTGCGCCGCGCAC-T-CCCTG TCG CGGGGTAGGTGTGCGGCACGC TTTGTGGTAATCTCC  84 26
        gyrA NONE
        serC NONE
        pheA 2124024 .. 2124074 + -11.2  -2.53911   TTTAAACTGCAGCCA CAAGCTGCGAGCCACAG-GCTGC AAGTGA GCGGCGCTCTGGCTCCTGGCTTG TGGCTTAGAGCTTGA  64 36
JLK41_RS10040 NONE
JLK41_RS10045 NONE
         cmk 2128145 .. 2128182 + -11.3  -4.65895   CGGAAAGCTCGCAAG   GAGGCATGCGGGAGA CCAGTCCT TGTCCCGCAGGCCTC    TTTTTACATGAACGA  95 61
        rpsA 2129965 .. 2129984 + -12.8  -5.04601   ATTCATCGAAGAAAA            GGGCGGCC CTCG GGTCGCCC             TTTTTCGTTTCTGCG 100 50
        ihfB 2130762 .. 2130777 +  -6.2  -3.62096   GGGGCGTGTCTTCCA              GAATTG CGCC CAATTC               TTTGAACTCATCCGC  57 296
JLK41_RS10065 NONE
JLK41_RS10070 2134427 .. 2134447 + -12.6  -4.98531   GGTGTAGTTTGGAGG            GCGAAGCC AAGAA GGCTTCGC            TTTTTCATTTACAAG 100 68
JLK41_RS10075 2134820 .. 2134838 +   -16   -4.5115   GGGCGTCCCTGCCCA             GGCCGGTC CTT GACCGGCC             TTTTGCGTTTTTGTG 100 48
        uvrB 2139654 .. 2139672 +  -3.1  -4.13767   GTGCTGCGCCAGCGC             CTGCC ATGTTCTGC GGCAG             TTTTCGGGTCAGCAG  59 517
JLK41_RS10105 NONE
JLK41_RS10110 2144750 .. 2144768 +    -3  -2.59431   CAAGGAGTGGGAGAA             GCTGCTGG CGG CCATCAAC             TGAGTTGTGGCGCGA  38 4
JLK41_RS10115 2145070 .. 2145083 +  -3.7  -2.57468   GTCGATTCACGATCA               GGGTC TTGC GTCCC                CTTCGTCTAGTGGCC  40 77
JLK41_RS10120 2145145 .. 2145155 +  -2.4  -3.61398   GGTTCGAGTCCCCTA                 GGGG ACG CCAC                 TTATTCCAGCCGCAA  49 16
JLK41_RS10125 2145288 .. 2145312 + -15.8  -2.73123   TCCACCAAACACACG          CAAGGCCAGC CAGGT GCTGGCCTTG          TCGTTCGAAGGTTTT  79 34
JLK41_RS10130 2145382 .. 2145403 +  -4.3  -4.13767   GGCGGTAACAGGGGT           TCGAGTCCC CTAG GGGACGCCA            TTTTCCAGTCGCAAC  61 4
JLK41_RS10135 2145535 .. 2145559 + -15.8  -2.72855   TCCACCAATCACACT          CAAGGCCAGC CTCGT GCTGGCCTTG          TCGTTCGAAGGTTTC  79 34
JLK41_RS10140 2145677 .. 2145702 + -14.7  -5.38326   CATTTGCGGAACCCA         GGGGCTGCCTC TCAC GAGGTGGCCCC          TTTTTGTTTGGTTCA 100 52
JLK41_RS10150 NONE
JLK41_RS10155 2148943 .. 2148969 +  -4.3  -3.81414   CGATTGCCGGCTGCG        CTCGGCGCGGGC GTAG GCGCGCACC-AG         TTCTTCGTTCAGGGT  58 430
JLK41_RS10165 2151212 .. 2151228 +  -7.9  -3.54459   GGTCCAGGCTGGTGC              GCTCGTC CGG GCCGAGC              TTTGCCACCACTTGC  60 215
JLK41_RS10175 NONE
JLK41_RS10180 2153072 .. 2153088 + -15.1  -3.47349   ATGCTGCGAAAGGAA              GGCGCCC ACT GGGCGCC              TTCTGCGTTTCGGGG  90 50
        leuC NONE
        leuD 2159763 .. 2159779 +  -3.7  -4.82901   CTTGAAGCTTGTAGC              TATTTCC GAA GGAAATC              TTTTTATGAAACAGA  74 104
        leuB 2160871 .. 2160900 + -14.3  -4.07868   AGTCTGTAATCTTTC       CAGCCCCGCCGGGG TGG TTCCGGCGGG-CTG       TTTATATAGGTGTAG  95 32
         asd 2162057 .. 2162094 + -24.3  -3.57561   GCAGACGCGTGATGC   AGACGAAGCCCCGCTAC CTCG GTAGCGGGGCTTCGTCG    TTTCCGGGCTTGCAG 100 49
JLK41_RS10215 NONE
JLK41_RS10220 NONE
        truA NONE
JLK41_RS10230 2167698 .. 2167708 +  -8.2  -2.54523   ATGTGACGGCGACTG                 CGGC GGG GCCG                 TCAATTAGCCTGTCA  52 7
JLK41_RS10235 NONE
        folC 2169977 .. 2169991 +  -4.9  -3.14881   CGAGGCCCTGGACTG               GCTGG CCCGC CCGGC               TTGATAAGGGGATTG  48 7
JLK41_RS10245 2170698 .. 2170711 +  -3.1  -4.75174   TGCAGCCCGTGAAGC               CGAACG CGA CGT-CG               TTTTTGCCTTGCCTG  74 107
JLK41_RS10250 2171368 .. 2171401 + -10.9  -2.53876   ATCTGCTTTAAAAGA     GTGGCCAGTGCGGAG CAAC CGCTGCGCTGGTCGC      TGAATTAGCCTGAAC  64 30
        purF 2172980 .. 2173038 + -24.3  -2.83371   GCCTGCCCTCGGTCG TAGCCCGGATGCAATCCGGGGGAATGTCA CAC TGAAGTT-C-CCGGATTGCATCCGGGCTA CTTATTCGTGAGGTA 100 58
JLK41_RS10260 NONE
JLK41_RS10265 2175140 .. 2175155 + -10.4  -4.72272   TGGCGCAATGAAAAA              GGCTCC CGAG GGAGCC               TTTTTCATGCCGAGG  89 116
JLK41_RS10275 NONE
JLK41_RS10280 2178865 .. 2178882 + -12.7   -5.4833   TCCCGCTACGAAAAA             CCCGCTC TGAT GAGCGGG              TTTTTTATTGCCTGG 100 48
JLK41_RS10290 NONE
JLK41_RS10295 NONE
JLK41_RS10300 2181970 .. 2181987 + -14.1  -5.49234   AGGCGTTACCCAGAA             CCCCGGC ACTG GCCGGGG              TTTTTTGTTGCCTGT 100 44
JLK41_RS10305 NONE
JLK41_RS10310 NONE
JLK41_RS10315 NONE
JLK41_RS10320 2186654 .. 2186677 +  -3.2  -3.59946   AAGTCGGCTTGCCAG          CCATG-TCC GGTCGGA GGAGCATGG          TTGTCTCATTCACAG  51 60
JLK41_RS10325 2187604 .. 2187629 +  -9.8  -3.39668   GGAAGGCACCGAGCA         CGTTCTCCACC TCGGT GGTGGAG-ACG         TTCTCGCCTTTCCAG  65 427
JLK41_RS10370 NONE
JLK41_RS10375 NONE
JLK41_RS10380 2201637 .. 2201661 +  -6.9  -2.78384   ACCGCAGCGTGCAGA          GCGATCGCCAG GCT CAGGCGCCCGC          TGTAGTGGAACGCCA  48 40
JLK41_RS10395 NONE
JLK41_RS10400 2205012 .. 2205046 +  -9.9  -3.32844   TTGCATGCCGTCGGC    CGCGCCTGCTCTGCGG CCTG CGGCAG-GCGAGCGCG     TTCTGCGGTGGCGCC  68 41
        pyrF NONE
JLK41_RS10410 NONE
JLK41_RS10415 2207785 .. 2207811 +  -2.2  -3.55622   TCCGCAGGAGCCCCT        CGC-GAGTGCG CCTGAA CCCGCTCAGCG         TTTGCCGGCGTTGAG  47 60
JLK41_RS10430 2210536 .. 2210548 +  -4.1  -3.18681   GGTGGCCAGGTACTC                CTTGT CGA ACAGG                TTGCTGGCATTGAGC  45 164
JLK41_RS10455 2216283 .. 2216307 +  -6.3  -3.96216   GTTGGCTGCGGTGAT          CCGTGGTGCGC AGG GTGCGTGACGG          TTGTTTGCCTGCAGG  62 4
JLK41_RS10460 2217056 .. 2217066 +  -5.4  -3.02511   AGGTTCACCGCTCTG                 GTCT AGC AGAC                 TGTTGAAAAACTACC  49 59
        arcD NONE
JLK41_RS10470 2219131 .. 2219147 + -10.8  -3.37796   GAGCCCCCGAGGTTA              GCGCCG TAGAC CGGCGC              TTGTAGCTCATGCGG  68 39
JLK41_RS10475 2219474 .. 2219485 +  -4.4  -2.71364   GCCTGCTTCGGGAGG                TGGT CATG ACCA                 TCATTAAACCCCTGG  43 7
JLK41_RS10480 NONE
JLK41_RS10485 NONE
JLK41_RS10490 NONE
JLK41_RS10495 2223478 .. 2223489 +  -2.2  -3.84514   CTCGGCCAGGTCGCT                GATC AGTT GGTC                 TTTGGTGATTGCCAT  54 322
JLK41_RS10505 2225686 .. 2225732 +  -8.6  -2.64735   ACTTTGCGTTTAGTC GTTACAATGGCGCGGCCCGTCG CAA TGACGGGCTGCGTGATGGTGGG TCCTGTCGGTCCCCT  52 81
         ffs 2225970 .. 2225996 +   -18  -3.06815   GCGCCATGAACGAAA         ACGCCCGATGCC AAT GGCATCGGGCGC         TCTGTTGACGGCGCT  89 163
        dnaX NONE
JLK41_RS10530 2229564 .. 2229577 +  -2.3  -3.86015   ATGCAGCTCCCGCCA               GGCTT CAAG ATGCC                TTTCTGACCGGCCTC  54 5
        recR 2230445 .. 2230464 +  -4.8  -3.73402   TCGCACCCACGCTGC            GCGCTGCC CATG GGCCGCGA             TTTCGTGCGCCGTGT  57 45
JLK41_RS10540 2231034 .. 2231060 +  -6.5  -2.53876   GCGGGCAGAAATGAA         ACGCTCGCTTG AAAAC CAAGCAAGCGC         TAGGTTAGGGTGGCC  48 27
JLK41_RS10545 2232308 .. 2232324 +  -9.4  -2.78816   GTCGCGCTGTGGCGG              GTCGCC GAACA GGCGAC              TGTACTCGCGGCTGA  55 86
JLK41_RS10555 NONE
JLK41_RS10560 2233976 .. 2233993 +  -4.1  -3.01869   GATGGAGCTGCAGCA             ACAAGTC GCCT GACTTGC              CTTTGTGAATTTATC  43 13
JLK41_RS10565 NONE
JLK41_RS10570 NONE
JLK41_RS10575 NONE
JLK41_RS10580 2238746 .. 2238775 + -25.1  -5.52384   CGCTCGACAAAGCAA       GACCCCGCGACCG GTGA CGGTCGCGGGGTC        TTTTTTTCATGCGCA 100 85
JLK41_RS10605 NONE
JLK41_RS10610 NONE
JLK41_RS10615 2243149 .. 2243173 + -18.6  -3.05844   TACCCGACAAACGCA          CAGGGCCGGC AGTGC GCCGGCCCTG          TGTTCGCATGCAGCC  89 502
JLK41_RS10635 2246505 .. 2246538 +  -6.6  -3.05384   GGCTTTTGCAGGAGC     GGCTTCAGCCGCGA TGCCTT TCGCGGCTGCACAC      TTGCATGAAAAAGGG  52 78
JLK41_RS10660 2250581 .. 2250611 + -14.6  -3.05596   CCAGCAGGCGTCCGG       CAGGGCGCACGCGG ATG CCGTGTTCGCCCAG       TTCGATCAGGCCGTC  74 155
JLK41_RS10735 2265194 .. 2265219 +  -7.6  -3.28791   GAGGCGTTCGCCGCT        CCTG-CGCCACC TAAT GG-GGCGACAGG         TTGTGACGGCAACAT  59 182
JLK41_RS10740 NONE
JLK41_RS10745 NONE
JLK41_RS10750 NONE
JLK41_RS10760 2269109 .. 2269130 + -17.3  -3.57144   AAGCCGGGCATGCGT           GCCTGCGGC CAGC GCCGCAGGC            TTTGCGGGTCACGGA  89 128
JLK41_RS10775 2272099 .. 2272122 +  -3.8  -3.05384   GCTCGGCCACGCGGC          GCTGGAAGTC CAAT GATTTCCGCC           TTGCCTGAGCCGCGC  43 61
JLK41_RS10780 2274346 .. 2274368 + -15.6  -5.00884   CGACTGGTGTGCAAA           GAGACGGCCC GAT GGGCCGTTTC           TTTTTTGGGGAGCGT 100 43
JLK41_RS10790 2275767 .. 2275782 + -11.8   -4.7497   ATTCGCAGTCAGAAA              GCCCGG ATTT CCGGGC               TTTTTCATGCCTGCC 100 46
JLK41_RS10840 2285987 .. 2286008 + -15.9  -4.54727   CGGCAGATACAAAAA           TGCCGCTCG ACCT CGAGCGGCA            TTTTCATTTCGGAGG 100 49
JLK41_RS10850 2287782 .. 2287840 + -23.5  -2.73124   TGGAGGCGTTTGGCT -GG-GTAGGGCGGGTGAAACCCGCCGT GAGGGAG ATGGCGGGTTTCACCCGCCCTACATCG CTTTCGCGGCTGAAG 100 104
JLK41_RS10865 2290976 .. 2291029 +  -3.7  -3.10715   CGCTGCGCTCGATCA GGCAGCGTCGATGCGAGGTTGGCAAA GCG TTTGCTCACCTCACCTCGCCCC-GCG TTGCCTGATCATCGC  43 53
        cysS 2292481 .. 2292512 + -18.8  -4.07885   AGCCCCGACGCTGAA      CGACGAAGGCCGCT GTGA AGCGGCCTTCGTCA       TTTTCGGGGGGGCTC 100 40
JLK41_RS10880 2294353 .. 2294388 + -28.4  -3.64822   CCTCAGCTTCTCGAT    CGACGACGCCCGTCGC CTCA GCGGCGGGCGTCGTCG     TTTGGCTCACGAGCT 100 41
JLK41_RS10895 2297007 .. 2297048 + -10.8  -3.31248   GCCGGCTGTCTGGGT GCGGC-GCGTGATCAAGGC CTGAC GCCCTGTTCACGCAGGCGC TTGTACAGGGTGTTG  68 4
JLK41_RS10905 NONE
JLK41_RS10910 NONE
JLK41_RS10915 NONE
JLK41_RS10920 NONE
JLK41_RS10925 2303280 .. 2303294 +  -4.2  -3.71378   TGCGCTGGGGCTGAG               CCGG GCTGCCA CCGG               TTTGCCTCTCCCATA  57 27
JLK41_RS10930 2305117 .. 2305134 + -12.7  -4.27316   AGCCGCGAAAAAAAA             CGGCACC CTTG GGTGCCG              TTTTCGATTCAGCCG  95 71
JLK41_RS10940 2306343 .. 2306356 +  -2.3  -3.57144   CGCAGGTTCGAGTCC               TGCCG GGTG CGCCA                TTTGGCGGTCAGGCA  49 12
JLK41_RS10945 2306475 .. 2306507 + -14.2  -4.74103   CGTCCACCCCATATT      CCAGAACGCCAGGC CAAAA GCCTGGCGTTTTTG      TTTTTAGCTTGAAAC 100 30
JLK41_RS10950 2306695 .. 2306710 +  -8.2  -3.64198   TGGCCTTGATTCGGG              GCCGGT TCGA GCCGGC               TTATGTCTGTGCAAC  64 110
         tig 2308075 .. 2308102 + -14.3  -3.24708   GTTCGAGAACACCAC        CATAAGCCAGC CTCCGT GCTGGCTTATG         TGTATTTGAGACATG  82 53
        clpP 2308797 .. 2308844 + -16.4  -3.80858   AGATGAGGCGCCGGC TGCGGGCATTCTGCACGGGGACG ATT CGTGCCCTTGAA-AATGCCCGCA TTTGCCTTCATCTTG  95 39
        clpX 2310191 .. 2310216 + -16.9   -4.4017   TGTCACACGATGCAC         GCAAGGGGCCC CCAG GGGCCCTTTGC          TTTTGTGGACATTGC 100 45
         lon 2312757 .. 2312770 +  -2.5  -3.48276   TTTCGGCCCTTGCTA               TAAAA CGGC TTTTA                TTGTGTCGGCAGGCC  47 65
        hupB 2313232 .. 2313251 + -13.6  -3.91196   AACGCATTACGAGAA            GGCGCATC CAAG GATGCGCC             TTTCCTCTATCTGGA  91 132
JLK41_RS10980 2315217 .. 2315233 + -13.7   -5.4833   CAGGCAATAATAAAA              CCCGCAC GGC GTGCGGG              TTTTTTATTGCCTGC 100 76
JLK41_RS11015 2325492 .. 2325508 +  -7.2   -3.5393   TGGTAGAGCGGCTCG              CTCGGC TGGGC GCCGGG              TTTGCCCGGAATGGT  58 411
JLK41_RS11030 NONE
        rnhA NONE
        dnaQ NONE
JLK41_RS11045 2332251 .. 2332277 +    -3  -3.54297   CCTGCGTCACACTGG        CAAGCATCGAC TTTTAT GGCG-TGCTTG         TTATAGTTGCTCGGT  47 132
JLK41_RS11050 NONE
JLK41_RS11055 NONE
        nudC 2335743 .. 2335764 +  -5.7  -3.01712   TGCTCGTGCGCGGTG           CGAGGTCGC TCAG GCGACCCAG            TGTTGCCAGACCAGG  49 59
JLK41_RS11070 2337304 .. 2337333 + -20.9  -4.08557   TCAGGTGACGTGAAA       TGCCCCTGATCCT CGCA AGGATCAGGGGCA        TTGTTCTTTCAGGGG 100 50
JLK41_RS11085 2339167 .. 2339177 +  -2.4  -3.81339   GGTTCGAGTCCCCTA                 GGGG ACG CCAC                 TTTAAGTTGTACATG  52 16
JLK41_RS11090 2339280 .. 2339293 +  -2.3  -2.72043   CCAGATTTTCGAAAT               ACTGC TTCG GCAGG                GTTTCAAACGAAGTT  39 38
JLK41_RS11095 NONE
JLK41_RS11100 2339485 .. 2339516 + -23.2  -3.95219   CCCGCTCCAAATAAA      CGAAAACGCCGCTC ATTC GAGCGGCGTTTTCG       TTTCTGCGATTTGCC 100 32
JLK41_RS11170 2352838 .. 2352864 +  -3.7  -4.20712   CGCTTTGCTGGCCCG        GCTGATCTGCAGC GCG GCTGC-GAGC-GC        TTTTCGCCTGTTCTC  62 173
JLK41_RS11175 NONE
JLK41_RS11180 2354736 .. 2354752 + -13.7  -4.93365   TCCTGAAACGAAAAA              GGCACCC ATC GGGTGCC              TTTTTCATTCTGGCC 100 67
        sohB 2359196 .. 2359211 +  -2.5   -3.2614   TCGTCTCAATCAGCA              GCGTT TCTGGT AGCGC               TTCGTGTACGGCGTA  43 13
JLK41_RS11210 2360254 .. 2360281 + -17.8  -4.09864   TGGACTGAATGCAGG        TACGAGGCCCGT CATG ACGGGCCTCGTG         TTTTCAGGCCTGGCT 100 33
JLK41_RS11220 2361488 .. 2361528 +  -4.5  -2.70932   AGCTGCCGCCAGCGC  CACGGGCGAAGAACAGCGG TAG CAGGTGCTCTTCGCTGGGG  TGGTTGCGCACGGCG  43 102
        msrB 2366300 .. 2366322 +  -9.9  -2.69799   GCTGGTACCGCGCGA           TTGAGCCTG CGCGC CAGGCTCGA           TCCTGTCTGGCGTGC  61 22
JLK41_RS11260 NONE
JLK41_RS11265 NONE
JLK41_RS11270 2369027 .. 2369048 +  -5.7  -3.18023   CGTCGCCGGCGCTGG           CCGCTGCGG GTCG CTGTCGCGG            TATTGCTGGTGCTGC  50 244
JLK41_RS11280 2371276 .. 2371313 +  -8.4  -3.85817   GCGGCAACCCAGGTG   CCCAGCGCGACAGTATG ACGGC CATGCTG-CGCGCCGGC   TTTCTGGCCGAAGAT  68 341
JLK41_RS11300 2373860 .. 2373887 + -12.6  -3.46212   AAAGCCCTCGACTGA        CGGCGCGCGGCT TATT AGCATCGCGCCG         TTCGTTCTGCCTCGT  79 46
JLK41_RS11305 NONE
JLK41_RS11310 2374848 .. 2374865 + -12.7  -4.35483   GGCGGGAATGAAAAA             GGCTGCC GGAT GGCAGCC              TTTCTTGTCGTGCAG 100 43
        sdhC NONE
        sdhD NONE
JLK41_RS11330 2379050 .. 2379068 +  -3.8   -3.5511   ACTTATTAAGGGTGA             CTGATATG TTG CAAGTCAG             TGTTTATCGCTACAA  49 32
JLK41_RS11335 2379797 .. 2379810 +  -8.1  -3.53012   GTAACACCTGCGGGA               CCGAC TCCG GTCGG                TTTCGCAGCAAAAGC  62 60
JLK41_RS11340 2382844 .. 2382890 + -10.1  -2.71712   CGCCTTTACTGTTTA ACGCCTTCATCCGCCAGGTGGC AGGT GCCACCTGGCGG-TAAAACCGA ATTTAAGGAAACGCA  61 25
        odhB 2384155 .. 2384183 + -12.4  -4.15044   AAGCCAGTCTCCTCC       ACGG-CGGCCCTG TTTA CAGGGCCGTCCGG        TTTATTCGAGAAGGA  95 41
        lpdA 2385689 .. 2385736 +  -7.7  -4.56597   CCGAGTTGTTGTAAG CCGCCGTGGTAGGTGGGGCG TCGCGTAAT CGCCTCATC-GTCGCGGTGG TTTTTGCAAGCAGAA  79 72
        sucC NONE
        sucD 2387955 .. 2387984 + -19.5  -4.83615   CGTTCCTGATGCTCG       CAAAAAGGCCACC TTCG GGTGGCCTTTTTG        TTTTTCTGCCCGCTC 100 42
        brnQ 2389599 .. 2389623 + -11.4  -4.82901   GCGTCGCCGTCAAAG          CAAGGCCGCC CACGA GGCGGCCTTC          TTTTTGTCGAACAAG 100 44
JLK41_RS11370 NONE
JLK41_RS11375 2390819 .. 2390837 +   -16  -4.07687   CATTGAAATGAAAAA             GGCCCGCA AAA TGCGGGCC             TTTTCGCAGGCGCCT 100 30
JLK41_RS11385 NONE
JLK41_RS11390 2392383 .. 2392393 +  -3.2   -2.8507   CGATGAGCCCTGAGC                 CCTT GTC GAGG                 TGATTGCTTGCATGA  42 28
JLK41_RS11395 2393746 .. 2393757 +  -7.2  -3.29471   TCTGCAGGACATCCG                CCGC GATA GCGG                 TTCCTGTCCTGCAGA  56 69
        htpG 2395706 .. 2395721 + -11.8  -5.14563   CTAAGCTTGTGAAAA              GCCCGC TTCG GCGGGC               TTTTTTCATGGGGCG 100 45
JLK41_RS11405 NONE
JLK41_RS11410 2400563 .. 2400576 +  -8.1   -2.9175   TGCGGCTTGGTCATC               GACCG CCGG CGGTC                TATCGTTGAACTCTC  55 68
JLK41_RS11415 2401420 .. 2401442 + -20.6  -3.25304   ATCCGTCATGAGGGA           GGCTGCGCCC GGT GGGCGCAGCC           TTGGTGGTGCTATTT  95 40
JLK41_RS11455 NONE
JLK41_RS11460 2409520 .. 2409530 +  -4.6  -3.62046   CTCATGGCTGCAGCA                 CTCC CCA GGGG                 TTGTTGAGCGCGTGC  54 423
JLK41_RS11490 NONE
JLK41_RS11495 NONE
JLK41_RS11500 2416410 .. 2416422 + -10.5  -3.02144   AGGGCGTGTGAGGTG                GGCGC ATC GCGCC                TGTTCGGCGGCATCC  64 30
JLK41_RS11505 2416828 .. 2416856 +  -8.7  -2.66451   CTTCAGTTTCCCCAG        GTCCCCCGCCG GATCACG CGGCGGAGGTC        TCGATTTCCGTGCGT  56 96
JLK41_RS11510 2418535 .. 2418552 + -14.1  -3.50853   GCCGGCAAAAGAAAA             CGGCGCC CTGG GGCGCCG              TTCTGCTTACAGCCG  86 46
JLK41_RS11530 NONE
JLK41_RS11535 2424113 .. 2424134 +  -2.1  -3.03124   GGTGCGCGACGAGGA           GCCCAAGCT GTGA GGCTGTGGC            TGTTGCGACATGGCG  41 13
        sixA 2424676 .. 2424699 + -15.4  -3.14132   GTCTGCGTGGAATAG          TCGACCAAGC AAGT GCTTGGTCGA           TTCCTACAAAAACAA  85 121
JLK41_RS11545 NONE
JLK41_RS11550 2427054 .. 2427066 +  -3.3  -2.83899   GCGCCCTTTAGCGGG                TGCCG AGG CTGCA                ATTTCATCCAAGATT  42 181
JLK41_RS11555 NONE
JLK41_RS11560 NONE
JLK41_RS11565 NONE
JLK41_RS11570 2430462 .. 2430474 +  -3.3  -3.09878   AGACCGTCTACCGTT                TCCCC TCA GAGGA                TGTTCACTCGATGAG  43 131
JLK41_RS11575 2431336 .. 2431352 + -10.8  -4.15841   GGGGAAGTTTGCAGA              GCGCCC ATCTC GGGCGC              TTTGTCGTTTCGTCG  84 55
JLK41_RS11580 2432782 .. 2432814 + -17.7  -3.23042   CGGGCTGATGTCATC      GGCCTGCTGCTGCCC CTC GGCCAGCAGCAGGAC      TTCATCCTCGCTCTT  89 338
        selD NONE
        mnmH NONE
JLK41_RS11600 NONE
JLK41_RS11605 2436721 .. 2436757 +  -7.8  -2.80821   AACTGTTCCGGCCAT    CCTGCCGCCTGCTGGC TTGTC GCCAGCAGGGCGCTGC    TCCTATGTTTCAGGA  53 67
JLK41_RS11610 2438780 .. 2438796 +  -7.9  -3.53761   CTGTGAGGCCGCGCT              GTTCGCC TGC GGCGCAC              TTTGGACGGCCATTC  62 35
JLK41_RS11615 2439792 .. 2439808 +  -2.2  -2.78384   GGTGCAGTGGCTGCT              GCGC GAAGTTCCG GCGC              TCTGATGCGCACGGC  39 4
JLK41_RS11620 NONE
JLK41_RS11625 NONE
JLK41_RS11630 2443590 .. 2443625 +    -9  -3.07522   ATGAGGCGACATTTT    CGCCGGCAATATGACCG AAT CGG-CATCTTGTCGGCC    TATCTTCCAGGCTGT  60 37
JLK41_RS11635 2444925 .. 2444951 +  -4.3  -3.61715   CTCTTGAACAGCTCG         CCGGCGCGC TGCAGGAAC GCGTGGCGG         TTGTTCAGGCCGGTG  54 468
JLK41_RS11665 2451034 .. 2451047 +  -3.1  -4.31329   ATCTATTTTTTCGAT               TATCG TTAG CGGTA                TTTTGCGATTTTTAA  65 43
JLK41_RS11670 2451579 .. 2451596 + -14.1  -3.73068   CGCAAGCAACAGGAA             GGCCCGC CAAT GCGGGCC              TTCTTGCGTTCAGCG  91 48
JLK41_RS11680 2453953 .. 2453983 + -17.6  -3.57144   ATCAGCCGCTGTAGA       TGAAGAGGCCCGCA TTC TGCGGGCCTCTGCG       TTTGCGCCTCAGGGC 100 41
JLK41_RS11710 2459958 .. 2459990 +  -7.6  -2.87931   TCATCCCAACCCGCA     GCCGGTGGTGCGCGC CAGC GCCTGAACC-CCGGC      TGTCTGCCCGGTACG  55 1
JLK41_RS11715 NONE
JLK41_RS11720 2465492 .. 2465503 +  -7.2  -2.62396   GCAGGTGTATCGGCC                GCGC TTCT GCGC                 TAGTCTGGACGGATG  49 65
         tpx 2466139 .. 2466157 +   -16  -4.45544   GGCGTCACCTGAAAA             CGGCCTGC TCT GCAGGCCG             TTTTCGTTGCTGCCG 100 48
JLK41_RS11730 NONE
JLK41_RS11735 2470762 .. 2470798 +  -3.6  -3.18264   CCCATGAATGGGAGA   GGGAGCAGAGCGTGTGC CCAT GAAT-CTCTCTGCCCCC    TTCATCCGTCGCCCG  45 140
JLK41_RS11740 2473930 .. 2473949 +  -5.6   -3.1505   CCTGCTCGTGCGCTC            CG-GGCCGG GCG CCTGCCGCG            TTCCTGCAGCCTGAT  50 70
JLK41_RS11745 2475439 .. 2475451 +  -5.5  -3.29511   GTAGGCAGGGAGCGG                TGCTG GAT CAGCG                TTCTGCCGACCTGCC  52 62
JLK41_RS11750 2478193 .. 2478204 +  -7.2  -2.78547   AGGTCGACAGCGCCC                GGGC CGGT GCCC                 TGCTTGATGCCATCG  50 463
JLK41_RS11760 NONE
JLK41_RS11765 NONE
JLK41_RS11770 NONE
JLK41_RS11775 NONE
JLK41_RS11780 NONE
JLK41_RS11785 2484229 .. 2484243 +  -5.6  -4.08767   AGGCCGTGCTCGATG               CGTGGG GAG CCCAGG               TTTTACCAGGCTACA  65 334
JLK41_RS11850 2491577 .. 2491606 + -17.9  -5.02502   GCTGCTGCATGTGGA       GGCGCCCGTTCTC AGCC GAGAGCGGGCGTC        TTTTTGTGTCATCTA 100 43
         tam 2493929 .. 2493946 + -14.1  -3.78329   GCCTGAGAAGAAAAA             GCCCCGC ATCT GCGGGGC              TTTGGCTTACTGCGC  91 95
JLK41_RS11930 2510809 .. 2510865 + -12.8  -3.39595   ACCAACTGCTCTGAA CGGATGATCGGCTAGTGCTGCGGCGG CGCCT CTGCCGCGGCGCTAGCTGTCCGGGCG TTGTCGATAGTTGCG  76 27
         icd 2527741 .. 2527760 +   -15  -3.81022   AGCGCATGAAAAAAA            GGCCGGTC ACAT GACCGGCC             TTCTTGTGGCGATTT  93 55
        clpS NONE
        clpA 2530991 .. 2531037 + -26.9  -3.17075   AGGCCCGCGCTGCAC GCG-CAAACGAAAACGCCCGGC AGTC GCCGGGCGTTTTCGTTTGGTGC TTGGCTTAGCGGGCG 100 67
        ftsK NONE
        lolA NONE
JLK41_RS12050 NONE
        crcB 2538948 .. 2538960 +  -3.4  -3.57387   CCCGCGCCAGCTTGC                TGGT CATTA ACCA                TTTCGCCGATGTATT  51 66
        serS 2540291 .. 2540311 + -16.1  -4.18018   TCGCGATGCATGGAA            CGGGGCGGC ACG GCTGCCCCG            TTTTCAATGGCGGCA 100 49
        cobA 2542208 .. 2542231 +  -9.5  -2.64616   AGTGCTTGCAGCAAG          GCCCGGCAG GCGCTG CTGCCGCGC           TCATCTGGATGCAGG  54 469
JLK41_RS12110 2547806 .. 2547824 +  -4.4  -3.31144   GACGAAGCGCACGGC             CTGCTTGC GCC GCGTGCGG             TTGTCCCGGTCCACC  49 449
JLK41_RS12190 NONE
JLK41_RS12195 NONE
JLK41_RS12200 2559828 .. 2559843 +  -7.5  -4.78753   GGCATTAAAATAAAA              GGGGC TGTAAC GCCCC               TTTTATTCATCTTCC  85 28
JLK41_RS12210 2561486 .. 2561498 +  -6.9  -3.63805   GGTAAAGCGGTGCTG                GTGGG CGA CCCGC                TTTAGGCTGTGCCCT  60 8
JLK41_RS12215 2561763 .. 2561788 + -12.5  -4.09243   CACCCAAGTGAATGA         TCAGGCCCCGC TATT GCGGGGCTTGC          TTTTGCGCAGCTGTC  89 30
JLK41_RS12220 NONE
JLK41_RS12225 2562833 .. 2562851 + -13.1  -3.32769   GCCCCGACTAGAAAA             GCCCCGC CGAGC GCGGGGC             TTCGTCGTTTACAGG  76 30
JLK41_RS12375 NONE
JLK41_RS12380 2587813 .. 2587828 + -11.8  -5.24531   ACCAGCTACACACCA              GCCGCC CACG GGCGGC               TTTTTTGTGCCCGCT 100 49
        uvrY NONE
        uvrC NONE
        pgsA NONE
JLK41_RS12400 2591932 .. 2591951 +  -5.6  -4.06502   CGCTCCAGTTTTACA            CGAGTCGC CAAG GCGGCTCA             TTTGATTTAAGGCTG  65 34
JLK41_RS12405 2592043 .. 2592071 + -18.3  -4.93968   AGCCTCCAATCCAAA        GGCCTCGTAGATC AAT GATTTACGAGGCC        TTTTTCATTCTCCAT 100 32
JLK41_RS12410 2592465 .. 2592477 +  -3.3  -4.67353   CCCGTAGATCACGTA                GCTGA AAC TCTGC                TTTTTCGATACCTGC  71 248
JLK41_RS12515 NONE
JLK41_RS12520 2612670 .. 2612685 +  -4.8   -3.7941   GGGGTGACTTAGTGT              CAATAT AAAA ATATTG               TTGTTATAAGCAATC  57 117
JLK41_RS12545 2616538 .. 2616570 +  -2.2  -3.47322   GCTTTGTGATGCTCT     TGCTCGC-TA-ATAGT GAA ACTATATACGCCAGCA     TTAGTTCTCATCGGA  47 16
JLK41_RS12565 2621756 .. 2621769 +  -4.5  -3.06315   CGAAACGCTCAAAAC               TGGTC GGTC GACCG                TGTTGAAGATGTTCA  46 56
JLK41_RS12570 2623709 .. 2623724 +  -6.8  -3.17051   CGCATGATCGTCGAG              CC-GGCC TGA GGCCAGG              TGTTGGTCGTGGGAG  54 17
JLK41_RS12575 NONE
JLK41_RS12580 NONE
JLK41_RS12585 2626912 .. 2626929 +  -4.1  -3.85698   CCTATGGCATCTTCC             GTCGGCGC CTG GC-CTGAC             TTTCTGGAGGGAAAC  56 9
JLK41_RS12590 NONE
        tatA 2627915 .. 2627927 + -10.5  -4.12043   GCGGTTCTGCGGACT                GCCGG TGA CCGGC                TTCTTTCGTTCGTTG  80 206
JLK41_RS12600 NONE
JLK41_RS12605 2630234 .. 2630248 +  -5.6  -2.86124   CCCTGAGCTGAAAGA               GCGAGG AAC CCTCGA               TGCTGTTTGGATGGA  48 30
JLK41_RS12610 2631785 .. 2631799 +  -4.2  -3.09492   GCGTACGGCCGATGC               ACACCA ATC TGGTGA               TCTTCGCCTTCGGCG  46 450
        chrA NONE
JLK41_RS12635 2635656 .. 2635668 +  -3.3  -3.72576   TCCAGAGTGCCTCCT                GCTAG CTC CTCGC                TTTAATGAACGCGCA  54 49
JLK41_RS12640 2637219 .. 2637229 +  -8.2  -3.22653   GATGGCAGCGATGAA                 GGCC TGA GGCC                 TGTTCTACGACTCGT  57 19
JLK41_RS12685 2646444 .. 2646477 + -13.8  -3.14564   GAGCAGTGGCTGCAA     CAGGAGCCGGCGCT GGTATA AGCCCCGGCGCCTG      TTGCTCAACCAATCG  78 5
JLK41_RS12750 NONE
JLK41_RS12755 NONE
JLK41_RS12760 NONE
        narH NONE
        narJ NONE
        narI NONE
JLK41_RS12780 NONE
        moaA 2669510 .. 2669547 + -17.7   -5.4505   ACGCTTGGGCCGTTA   CCACCTGCCA-GGCGGCG TTG CTCCGCCATGGCCGGTGG   TTTTTTATTACACGG 100 58
JLK41_RS12795 NONE
JLK41_RS12800 NONE
JLK41_RS12805 NONE
JLK41_RS12830 2677591 .. 2677620 +    -5  -3.18912   ATCAATAAGCTGCTT       GAGGGGCTTG AATAGTCAGA CAGGCCTCTC        TTGCTAGCTACCTGC  48 11
        mobA NONE
JLK41_RS12840 NONE
JLK41_RS12845 2680214 .. 2680239 +  -5.4   -3.4052   GCCAAGCGCTGTGAG         GCCGAGCTGGC GGTGA GCCAG-TCGAC         TTCGTTGACTTGGCG  53 295
JLK41_RS12855 NONE
JLK41_RS12860 NONE
JLK41_RS12865 NONE
JLK41_RS12870 2683619 .. 2683634 +    -4  -4.23674   AGGGCATGTTTTACC              TGAGCT GGTG AGCTTA               TTTCTGTTCGTGAAG  62 15
JLK41_RS12875 2686081 .. 2686092 +  -5.8  -3.51934   TGGCGCGCAGCGAAG                GGCT GTGG AGCC                 TGTTTCTGCCAGCCC  55 354
        norR 2692075 .. 2692085 +  -2.4  -3.28912   TGCGTAAGCTGGCAC                 GGCG GCT CGAC                 TTAATCTGACTATGG  44 6
        moaC NONE
JLK41_RS12910 NONE
        moaD NONE
JLK41_RS12920 2693855 .. 2693872 +  -9.9  -3.93236   CCAGGTACGTGGCAG             CCTTGAC CGTG GTCAAGG              TTTGTCGCGTTGGTC  78 308
        moaB NONE
JLK41_RS12935 NONE
JLK41_RS12940 NONE
JLK41_RS12945 NONE
JLK41_RS12950 2698461 .. 2698510 +  -7.3  -5.83226   GATTTGTCCGCTTCA CGCCAATTTA-TGCCGCTGCATC TCGCCC GATG-AGCGGCGTTGAGTCGGCG TTTTTTTGTTGACTT 100 313
JLK41_RS12955 2700731 .. 2700775 + -22.5  -2.50994   CGCATGAGGGGCGGC GCTGCCATAGCCATAACAGC CACGCA GC-GTTATGGCTATGGCAGC CTTGGTGCGCTTGGA 100 34
JLK41_RS12970 2704858 .. 2704868 +  -8.2  -3.59979   TGGATACCTACCTGA                 GCCG TGT CGGC                 TTTCAGGTGCGCGCC  64 147
JLK41_RS12985 2707541 .. 2707566 +  -3.3  -2.82623   CATGACTAGTGTGAG         CGTCGCGCAG CGACGAT CTGC-CGATG         TCCTTCTCCCCCAGG  41 32
JLK41_RS12990 NONE
JLK41_RS12995 2709616 .. 2709634 + -14.6  -2.73483   GGCGTTGACGTCGTA             GCCCGGAT TTC ATCCGGGC             TACTTCCGGTACGGT  77 33
JLK41_RS13000 NONE
JLK41_RS13005 2712297 .. 2712338 + -14.3  -3.63968   GCGCGACTGAGGTCA TGGCAGCGTCGC-GCTCGCG CAG CGCGCGCTGGGGCGCCGCCA TTTCAGCCTTTGCCG  90 472
         pyk 2714071 .. 2714084 +  -8.1  -3.74747   CCTGCGGGTGATCCG               CGTCG GCGA CGACG                TTTGCTAGGAGTTCC  67 4
JLK41_RS13015 NONE
         eno NONE
JLK41_RS13025 NONE
JLK41_RS13030 2718780 .. 2718813 +  -2.3  -4.00469   TCGCCCTAGATCGGC     TCCTCGTCCGCCGG GTAGCGG CTGGCGGTC-AGGC     TTTCCTTGATCTTGC  57 79
JLK41_RS13040 2720794 .. 2720809 +  -6.2  -4.54404   ATAATGGAAAAATGT              TGTTGT TATT ACAACA               TTTGTTCTTGATTTA  74 97
         zwf NONE
         pgl NONE
JLK41_RS13055 2723736 .. 2723753 +  -7.7  -3.73224   GGCCGCAGCGCGGAC             TCGACCG GCAA TGGTCGA              TTTCATGCGCCGTCC  67 44
JLK41_RS13060 2724898 .. 2724910 +  -4.7  -3.14051   GTAGAAGCCGACGTC                CAGCG ACA CGCCG                TCTTCCTGGGCGTAG  47 198
JLK41_RS13095 2733612 .. 2733642 + -21.1  -2.98823   CGGCTTCTGAGTCTG       CCGGGCCGCCGCG CCGTT CCCGGCGGCCCGG       TCTCTATCGACAGGA 100 31
JLK41_RS13100 2735983 .. 2736024 +  -3.6  -3.85698   AGAAAGAGCCACCGA GGCC-GCGGTGCTC-CGCGG CGCA CCCTGAGAACACGGCAGGCC TTTGTAGGGGGCGCG  56 304
        malE 2740924 .. 2740938 +  -2.1  -2.60496   CCGAGGCTATAAACC               TGATG TCCGT CGTCA               ATCTTTCCGCCGCCG  38 83
        malF NONE
        malG NONE
        malT 2746301 .. 2746354 + -20.3  -2.87522   GAGTAGGGGAGAACC GATATCCCGGCCCCGCA-GGGTGCGC CGT GCGCACCGATGCGTGGTCGGGGCATC TGTCGTATGCGTTGG  95 35
JLK41_RS13135 2748473 .. 2748501 + -13.2  -3.70919   ACTAGGCCCCTTGCG        TTTGCAGGAGCC TGTCC GGCTCCTGCAGG        TTCTTAAGCTTTCCG  91 294
        malK 2749853 .. 2749880 +  -9.1  -3.37522   TCGGCTGAACGTTTT        GG-GTTGCGCCC CTTAC GGGCGCCACACC        TTGATTCGCTGCGCT  63 200
         pgl NONE
JLK41_RS13165 2754072 .. 2754099 +  -2.7  -2.86271   CTAAAATCTGTGTCG        CATTGGCCGAT ACATAC GTCAGCTAATG         TCATTGTGCTGGCGC  40 82
JLK41_RS13170 2756241 .. 2756266 +  -8.9   -3.6761   GAATGTCCAACTACC         GC-CGCGCTCGC GAT GCGGGCGCCTGC         TATTTCTTCACGCCG  68 175
JLK41_RS13200 NONE
JLK41_RS13205 2759791 .. 2759808 +    -4  -2.54745   TCTTGGGGGGCGTCG             GCTGCC CGCAAA GGCTGC              ACTTTTGTCAGTAAG  40 64
JLK41_RS13210 NONE
JLK41_RS13215 2762853 .. 2762874 +  -8.7  -2.73542   CGGCCGTGTATCGGA           CTCTGTACG CTAC CGCACAGAG            TGCTTGACCATTGGG  57 261
JLK41_RS13220 2763779 .. 2763793 +  -5.6  -2.62735   CCTGTGCCGCAGGAA               CCTGCC AAT GTCAGG               TGCTATCCAGAATCT  46 138
JLK41_RS13225 2764818 .. 2764854 +  -7.2   -3.6608   CGATGATGGTCAGCT   GCGCGCC-GGTGATGGC GTCG GCCATTTCCCGGTGCAC    TTTCGGTGGGGTAAT  61 341
JLK41_RS13235 2766603 .. 2766614 +  -5.8  -3.08133   CCAGCTATCGACGAT                GTCG TCAC CGAC                 TTCGCTGGCTGCCTG  49 435
JLK41_RS13290 2781385 .. 2781395 +  -2.4  -2.52464   GGGGGCTGCAGCAAG                 CCTG ATG CCGG                 TCGATTGCGGAACAA  37 78
JLK41_RS13295 2781533 .. 2781551 + -10.2  -3.17146   ACGAGCTCTGGCGAT             CCCCAAGG TCC CCCTGGGG             TCTCTTCTCCCGCCA  65 52
JLK41_RS13300 2783122 .. 2783153 +  -2.8  -4.00124   TCAGGCATCACGCTT      GAGGGCGTTGCCCG AGCG CGGCCATTGTCATC       TTTCCTTCTCCGCTC  57 63
JLK41_RS13305 NONE
        galU 2785489 .. 2785510 + -15.9  -3.51411   CAGGCTGATCGACAC           GACGCCACC TTCG GGTGGCGTC            TTGCTTTCAGGGGAT  93 45
        gorA NONE
JLK41_RS13325 NONE
JLK41_RS13330 2788387 .. 2788422 +  -2.4   -4.1552   TTATCCCGACAACGG    CTGAAACCGACGCCTGC TTC GCAGGCG-CGGATGAAA    TTTCTTGAACCGATC  60 22
        galU 2789630 .. 2789640 +  -3.2  -3.84808   ACCTGCGGGGCAGGC                 CAGC GCG GTTG                 TTGTTGTGCCTTCAC  54 291
JLK41_RS13350 2790930 .. 2790946 +  -2.9  -3.15544   TCCTGAATCAATGTA              ATGGCTT TTG AGGCCAG              TTGCTCGGCATAGGC  44 307
JLK41_RS13360 NONE
JLK41_RS13365 NONE
JLK41_RS13370 NONE
JLK41_RS13375 NONE
JLK41_RS13380 2796588 .. 2796634 + -14.3  -2.87132   GCGAGTAGTCATTCG CGGCCTTGGCCACCGCCGGTT GCTGA AGCTGGCGGTGGCCTGGTCCC TGTCTCCCGGACAAA  79 52
JLK41_RS13385 2798386 .. 2798399 +  -2.3  -3.17051   CGGCCTCCTGCAAAC               GCTCG AACG CCAGC                TGTTCATCCTCGACG  42 212
JLK41_RS13395 2801060 .. 2801115 +  -9.5  -3.23274   TGATCCCCGTCGTTG CCTGACCCGCTGCCAGCCCCGGACGC CCTGT GCGTCCGGGGCTG-CGCCGTTGCGAG TTGCGTTGTCGGCCA  61 21
JLK41_RS13400 2801941 .. 2801952 +  -5.8  -4.08767   CCGACTCGGCATTCG                CCGT GCGC ACGG                 TTTTCCCGACCTCGC  64 406
JLK41_RS13425 2806746 .. 2806765 +  -2.8  -2.52464   GATGCTCACTCTCCG            CGC-GGC TGATCAC GCCAGCG            TGACTTGAGGAAAGA  37 17
JLK41_RS13430 NONE
JLK41_RS13435 2811391 .. 2811414 + -15.3  -5.64274   TGCCGATCCTCCTCA          GCCCCAGGG ATGATG CCCTGGGGC           TTTTTTTATCCCTCG 100 68
JLK41_RS13445 2814013 .. 2814037 +  -5.6  -3.21924   GCCCCTGGCCAGCCG          CCCAGCAGCT CGACC AGATGCAGGG          TCTTCTCGGCGATGC  51 183
JLK41_RS13460 NONE
JLK41_RS13465 2817859 .. 2817875 +  -3.6  -2.78384   GCTGACGCTCTATCG              GCAGGC CGACA GCCTGG              TGTGCTGAGGCCGGC  41 1
JLK41_RS13470 NONE
JLK41_RS13475 2819455 .. 2819465 +  -4.6  -4.11216   CCAGCAGGACGGCCA                 GCTG CGG CGGC                 TTTTCGGCGTCGAAC  62 427
JLK41_RS13490 NONE
JLK41_RS13495 2824122 .. 2824137 +  -3.3  -3.40403   GAAACGGGTACGGAA              CTTTC GCAGTA GAAAG               TTGTAATGGCGAGAC  47 14
JLK41_RS13500 2824590 .. 2824615 +  -8.1  -2.53759   GAGTAAGTCGTCCGC         GCTCGGGGCGC CCTG GCGCCCCTGCC          TGGATTGAGCATCTT  52 35
JLK41_RS13505 2824927 .. 2824946 +   -15  -3.06183   GCCTGAAACGACGAA            GGGGCGAC TCTG GTCGCCCC             TTCGCTACGCCTGAC  80 35
        metH 2831854 .. 2831875 + -13.7  -2.53382   GCGGGTTCAGCGGTA           CCCGAGCGGC GCA GCCGC-CGGG           TACCTTGCCGGTACT  72 50
JLK41_RS13530 2833369 .. 2833385 +  -3.5  -2.98823   GGTGGTCGCGGCGGC              GCCGCAC TGA GCGAGGC              TATCTGTCCGGCAGG  43 16
JLK41_RS13540 NONE
JLK41_RS13545 2837474 .. 2837490 +    -3  -3.16742   GCAGCCCCGTCGTTT             TGGCGCT CAGG AGC-CCA              TTCATGAAGATTGCC  43 152
JLK41_RS13550 2839422 .. 2839449 + -22.8   -4.0162   CGAAGCACAGGAAAA        CGCCGCGAGCCT GCAG AGGCTCGCGGCG         TTTGTGCTATCCAGG 100 70
JLK41_RS13575 2843863 .. 2843873 +  -3.2  -3.60296   GCAACCGAACAGTCG                 TAGC GCT GCTG                 TTTCGGCTGCAGCTC  49 57
JLK41_RS13585 NONE
JLK41_RS13590 2847482 .. 2847502 +   -14  -4.54727   CGCGCCGACGAGAAA            CGCCCCGA CTGGT TCGGGGCG            TTTTCGTTTCCGGGC 100 42
JLK41_RS13595 2848027 .. 2848053 + -20.2  -3.73775   GTACACAAACGAAAA         CGCCGCATCCCG GAA TGGGATGCGGCG         TTTCATGGCGCTCGA 100 52
JLK41_RS13610 NONE
JLK41_RS13615 NONE
JLK41_RS13620 NONE
JLK41_RS13625 NONE
JLK41_RS13630 NONE
JLK41_RS13635 2858097 .. 2858125 +  -5.1  -2.52464   GCGGATCATCGACAA        TAGCGCGCCGGCT GGA AGCCGGTGCCAGA        TGAATTGCCAACCGC  42 131
JLK41_RS13640 2858925 .. 2858954 + -16.5  -2.78384   GTAGTAAGCCCCCTG       C-CTGCCTGCGCCG CTC TGGCGCAGGCAGCG       TCTACTCAAGCAGAA  79 37
JLK41_RS13665 NONE
JLK41_RS13675 2864614 .. 2864631 +  -9.8   -4.4648   ACAGACCATAAAAAA             CCCGGC GCGAAG GCCGGG              TTTTCTGGTGACGCT  89 59
JLK41_RS13705 2868274 .. 2868298 + -17.2    -5.626   TGCTGCAAAAGAAAA          CGCCGCGACT TCTAT AGTCGCGGCG          TTTTTTTGTGCCCTG 100 57
JLK41_RS13715 2869423 .. 2869471 +  -8.7   -5.4387   GGGCACACCGACAAA GACGTCAAAGACTCCTCGTTGCC ATC GGCAGCAGGTTGTCTGCGACGTC TTTTTTCGTTTCTGT 100 260
JLK41_RS13725 NONE
JLK41_RS13730 NONE
JLK41_RS13735 NONE
JLK41_RS13740 2873992 .. 2874007 +  -6.8  -3.05963   TAAGGTCAATCGTGT              GGTCGG ATAA CTGACC               TGTTGGCGTGACAGT  52 16
JLK41_RS13745 NONE
JLK41_RS13750 NONE
        cobA 2879460 .. 2879475 + -11.8  -4.36914   GCAGAAAAAGAAAAA              CCCGGC CGAA GCCGGG               TTTTCTCAGAGCGCC  93 45
JLK41_RS13800 NONE
JLK41_RS13805 2889769 .. 2889792 +  -6.6  -2.78384   TCGCGATCAGGCCCA          TGCGCAGCGC ACCG GCGATGCGGA           TCTGCTCGAAACGCG  47 441
JLK41_RS13835 NONE
JLK41_RS13840 NONE
JLK41_RS13845 2899831 .. 2899857 + -10.8  -3.14132   CTGATACACCGCATC         GCTGACCAGCCG GGT CGGCTGCTTGGC         TTCATCGAGAAACAG  64 348
        pabB 2911859 .. 2911887 + -19.7  -4.07568   GAGCAGCAAGAAAAA        CGCCGCGATTTCT CAC GGAAATCGCGGCG        TTTTCAAGACAGCAG 100 49
JLK41_RS13895 2913343 .. 2913374 + -23.2  -3.64822   GGCAGGTAGCTGAAA      CGAAACATGGCGCC CCAG GGCGCCATGTTTCG       TTTGCATCGCAGGCT 100 43
JLK41_RS13925 2917802 .. 2917818 +  -3.5  -2.89039   AGCGCAACACCCTCT              CGCAGCG ATA CGCCGCC              TCTATGACGCTCATT  42 70
JLK41_RS13930 2919070 .. 2919088 + -17.4  -4.34402   CAGCAGTAACGAAAA             CGCCGGGC AAT GCCCGGCG             TTTTGCTATCGACGC 100 47
        oprI 2921439 .. 2921462 + -19.6  -5.38249   CTCGGTTTTTCGAAA          GCCGGCCCAG TTCA CTGGGCCGGC           TTTTTTATGGTTCAT 100 48
JLK41_RS13970 NONE
JLK41_RS13975 2928064 .. 2928074 +  -2.4  -3.74693   GCGAAGGCTGAGCAG                 CGCC GGA GGGG                 TTTGCTAGACTGGCG  52 30
        greB 2928804 .. 2928816 +  -4.7  -3.29144   GCGGGCGAAACGGCT                CAGCG ACT CGCCG                TTCTGCACGAACTGG  49 218
JLK41_RS13990 NONE
JLK41_RS13995 2931717 .. 2931730 +  -4.5  -2.70932   CCGGGTGCATCCAGG               CC-GCC GCC GGCAGG               TCGTTGAAACCGGCG  43 186
JLK41_RS14020 2938554 .. 2938569 +    -6  -2.55361   CGCTGCCTTCGTAGG              AGCCGG CTTG CCGGCG               ATGCTTTTTAAGTAA  46 42
JLK41_RS14075 NONE
JLK41_RS14100 NONE
JLK41_RS14105 NONE
JLK41_RS14110 NONE
JLK41_RS14115 NONE
JLK41_RS14120 2964962 .. 2965013 +  -8.7  -2.91264   AGGTGGACATGAAAG GCGATGTCCACCCTACG-CACG GATTGAACA CGAGCCGTAGGGTGGATCACGC TGTATCGATCCAGCA  59 192
JLK41_RS14125 NONE
JLK41_RS14130 2968471 .. 2968492 +  -3.7  -5.08824   TCACGGACCTCAGGG           TAATAGCCG CTTG CGTCTATTG            TTTTTTCACTGAACA  80 251
JLK41_RS14135 2969466 .. 2969478 + -10.5  -3.62046   CAGGCGCACGTTGTT                CGCCG AGT CGGCG                TTCTTCACCGCCTCC  67 220
JLK41_RS14145 2970964 .. 2970986 +  -5.5  -3.35679   CGACGATCTTGCTCC           TGATCCAGC GCTCG GCCGGATCG           TTGTCGGTCACCCCG  53 74
JLK41_RS14170 2974562 .. 2974581 +   -15  -2.78816   GGAATGATGGCGACG            CGGCCCCT GCGC AGGGGCCG             TGTGCTCAGAGGTGA  77 34
JLK41_RS14180 NONE
JLK41_RS14185 NONE
JLK41_RS14190 NONE
JLK41_RS14195 2979310 .. 2979339 + -13.5  -2.59431   TGAGCCGGCTGTAAA       GCG-CCAGGCCGGG CAA TCCGGCCCGGACGC       TGCATTCTGAAAACC  72 27
JLK41_RS14200 NONE
JLK41_RS14205 NONE
JLK41_RS14210 NONE
JLK41_RS14215 2981940 .. 2981962 +  -6.2  -2.55437   TCAAGCGCAGGCACT           GGCCACTGAG TAG CTCACTGCCC           CTGTTGCTGTTACTG  46 13
JLK41_RS14225 2985415 .. 2985435 +  -3.1  -3.58343   GGCCTGCTGGTCACG            CTCGGCGGA TAC TTCGCAGCG            TTTGAGAATGGTCAG  49 198
JLK41_RS14260 2990099 .. 2990111 +  -4.7  -4.21194   CGCCGACACTCACTT                GCCCG AAG CTGGC                TTTTCCATGATCAGC  65 74
JLK41_RS14275 2992183 .. 2992200 +    -4  -2.78596   CCCGCCCTGGCGAGA             GAGGCG TGCCCT CGCCCC              TCTCGTACACCCGTA  41 43
JLK41_RS14280 NONE
JLK41_RS14285 NONE
JLK41_RS14290 NONE
JLK41_RS14295 NONE
JLK41_RS14300 2996972 .. 2996994 +  -7.7   -5.1861   TCGGGTTGGCCCTTT          GA-GCCGCCT CGTT GGGCGGCTTC           TTTTTTAATCATGGG 100 104
JLK41_RS14310 2998206 .. 2998220 +  -4.2  -2.71712   CAGCAGCAAGAGCAC               CCGC TCCTGAC GCGG               CTTTAGCAACACGCG  43 16
JLK41_RS14315 2999078 .. 2999090 +  -3.3   -4.4773   GTCGTCGAAATGCGC                CGGGT CGA AACCG                TTTTCCTTGATGTCG  69 320
JLK41_RS14325 3000496 .. 3000536 + -13.1  -3.08996   CAGCCAGCAGCGCAT  CGCCCTTGGGCACGGGCTG ACT CGGCTCGCGCCCGAGCGCA  TCTTCGATGCCCCTG  72 410
JLK41_RS14350 3003915 .. 3003928 +  -8.1  -3.29043   AGGCAGGCCGAGCGT               GGCGA CGGA TCGCC                TTCTCGCACGCCATT  59 63
JLK41_RS14355 NONE
JLK41_RS14360 3005480 .. 3005493 +  -6.7  -3.17075   GGATCTGCCGCAGCG               CATCG GTGG CGATG                TTCAGTTGCCGGCGG  52 245
JLK41_RS14370 3006750 .. 3006769 +  -2.2  -2.74192   GCGGCTCGAACGCTG            TTTTTTCA GGGT TGCAAAAA             TACTGTTCCGGGATG  39 83
JLK41_RS14375 3008345 .. 3008370 +  -5.4  -3.34398   AACGAAGCGTATAAA         CGGAATGCGAC ATTTC GCCGCA-TCCG         TATTTCGAGGAGACA  52 250
JLK41_RS14380 3008802 .. 3008831 +    -7  -3.05463   TGCCCCGCAGCAGCC       AGTCCGCCGCTG CACCGC CAGCGCCGGGCC        TTGCCTACACCGGCT  52 265
JLK41_RS14385 NONE
JLK41_RS14390 3015414 .. 3015428 +  -3.4  -2.54896   ATGAAGCCACGGGCT               TCGAGC TCG GCGCGG               TGGATTACATCCGCA  40 334
        mnmC 3027362 .. 3027395 +  -5.1  -3.53012   AGCTGATTCGCGGCA     CCTAGGCGCGGGCCTG CGC CAGCACCG-GCCGGGG     TTTGCGAAACACCAG  52 21
JLK41_RS14445 3030272 .. 3030288 +  -2.1  -3.18383   CGCAAGGCACAGGGC              GCCACAC AAT GCCTGGC              TTAGTGCCTGGCAAT  43 5
JLK41_RS14450 3031246 .. 3031269 +  -4.6  -3.13522   GCTGCAGACCTGAGC          G-GCGTTGC ACGCCAC GCAACGCAC          TGTTGCTCGGACGGT  48 28
JLK41_RS14455 3032596 .. 3032609 +  -9.5  -4.15222   GCAGGCAACAAAAAA               CCCGC CGAA GCGGG                TTTCTTCCCAACCAT  79 83
JLK41_RS14480 3041297 .. 3041310 +  -3.7  -3.40403   TCGAGCCAACCTGAT               CCGGC CAAC GCAGG                TTATAGTGCGGCACC  47 27
JLK41_RS14485 3042500 .. 3042512 +  -4.7  -3.27653   ATGCGTCAAACCTTC                GCCAC TGT GGGGC                TGTTCTGATGCCCCT  49 122
JLK41_RS14490 3045313 .. 3045328 +  -4.6  -3.95073   CCCCGGACACCATCA              CCACGC CCCA GCTTGG               TTTGTGGGTGTGGGA  61 191
JLK41_RS14500 3046861 .. 3046886 + -12.6   -4.1523   GCTGAATTCCTGGCA         CTCGCTGCTG GCAAAA CGGCAGCGAG          TTCTTTATGCTTCGA  95 36
JLK41_RS14505 3047335 .. 3047360 +  -3.9  -3.15249   AGTTCACGGCGGCTG         ATGCCCTCGTGC CGG GCACG-GGCCAG         TTGCTCCAGCATGTA  45 138
JLK41_RS14515 3048228 .. 3048251 +  -4.5  -2.91593   CCTTGCCGAGCTGCG          CC-CGTGCGC ACGGA GCTCACGCGG          ATTTATCGACAGGTG  45 259
JLK41_RS14520 3049170 .. 3049209 +  -4.8  -3.31144   GCGTTCGTACAGCAG  GTGCTCGGCCAAC-CGGTC GGC GACCCTGGCGGGCGAGCGC  TTCTCCGCCTGAGCG  49 40
JLK41_RS14530 3051355 .. 3051373 + -14.6  -3.37796   GTCCAGGGAGACATT             GCCGATGG AGC CCATCGGC             TTGTCGGTGATGCGA  80 302
JLK41_RS14550 3053320 .. 3053365 +  -2.4  -2.97747   CGACCTGGCCCTGAA TCCGGGCGCGCGCTGACCCACA TCAA TGCCGTTC-GC-CGCGCCAGGG TCTGTAATGTCAGGA  40 10
JLK41_RS14555 NONE
         pyk 3055854 .. 3055872 +   -16  -4.75372   CAGCTGAACCGGAAA             GGCCGCTC ATC GAGCGGCC             TTTTTCATGCCTGCT 100 45
JLK41_RS14585 3061199 .. 3061231 + -13.4  -4.09685   ACGCTGCAAGCTGCA      AGGAGAAGCCCGGC CCCGT GCCGGGCTTCTGCG      TTTTCAGGCGTGGCG  95 57
JLK41_RS14600 3064403 .. 3064428 +    -4  -3.72576   TACCTGGCGGGCTGA         T-CAGCTGCCG AAGCG CTGCAGCTGCA         TTTCATGCAGCCGGC  54 26
JLK41_RS14620 3067555 .. 3067571 +  -5.7  -2.90392   CTCGCGGTAGTACGC              CGCCTGC TCG GCGGGCA              TCTGCTTGAACAGTG  46 80
JLK41_RS14635 NONE
JLK41_RS14640 NONE
JLK41_RS14645 NONE
JLK41_RS14650 NONE
JLK41_RS14655 3073385 .. 3073396 +  -2.2  -2.90322   AATTCATCTGCAGGA                GCTGC CAT GC-GC                ATTCTTCTCGTCGAA  40 39
JLK41_RS14660 NONE
JLK41_RS14665 3075880 .. 3075890 +  -6.8  -3.14527   CCACCTCGCCACGCA                 GGTC CAT GACC                 TCTTCGTAGAGCTTG  52 383
JLK41_RS14715 NONE
JLK41_RS14720 3083316 .. 3083326 +  -4.6  -3.18383   TGTCGTGGCAGCTCG                 TCGC CAG GCGG                 TTGCTGGCTGAAGAT  47 233
JLK41_RS14730 3084967 .. 3085000 + -16.8  -3.30124   GACCCTTGACCGTTT     CGACGACCGGCCAGC CCTGT GCTGGCCGGTTG-CG     TTCTGCCCGCTGGCC  93 39
        folM NONE
        folE NONE
        folX 3086955 .. 3086969 +  -7.1  -3.27475   TGACGGCGGCTTGCT               GCCTC CCGGC GAGGC               TCTTATCATCGCCGC  56 38
JLK41_RS14750 NONE
JLK41_RS14755 3087734 .. 3087747 +  -3.8  -3.29144   TAACAACTCATGGAA               CACG AGGGAA CGTG                TTCTGCGCGCAGTCG  47 120
JLK41_RS14760 3088391 .. 3088420 +  -7.7  -3.16564   GCGCGCTGGTGTAGA       GGGCCGCG-AGGCG TGA CGCTGACGCCGCCC       TTCGTCAGATGGGCA  57 27
JLK41_RS14790 NONE
JLK41_RS14795 NONE
JLK41_RS14800 3097294 .. 3097321 +  -2.6  -5.00884   CATTTTCAGGCGTGA        TGCCCCCTAACT GAAC ACTAACGGGGCA         TTTTTTGACCAGCCT  75 50
JLK41_RS14805 NONE
JLK41_RS14810 NONE
JLK41_RS14815 3101178 .. 3101191 +  -5.2  -3.35679   CGGCCTCGATGGCAT               GGCG CAGGAA CGCC                TTCTCCGTGACCAGC  53 489
JLK41_RS14850 3106338 .. 3106358 +  -9.7  -2.78384   ACTACGCCGCCTACC            GCCAGCG GGTGCGG CGCTGGC            TCTAGTGCGCCGGCG  57 0
JLK41_RS14875 3111878 .. 3111896 +   -11  -2.52516   ACTGGCGGGCCTCAG             TGCGCCTG GTG CAGGTGCA             GTTGGTCATGCCCGC  64 62
JLK41_RS14885 3113543 .. 3113556 +  -5.2  -2.79501   CGACTGGCTGCTCGC               GGCC AATAGC GGCC                TGTCGTAACCATCTA  43 120
        hemN NONE
JLK41_RS14895 3115841 .. 3115862 +  -5.1  -2.71731   GGCGATGTTTTACCT           GCACTGGTAG CTG CAACCAG-GC           TGATTGCGCCGTCGC  43 16
JLK41_RS14900 3116845 .. 3116855 +  -2.4  -2.93073   GGAGACGCAGGAGGC                 CCGC GCC GAGG                 TGGTTCTTCCGCGGC  40 80
JLK41_RS14905 NONE
JLK41_RS14910 3117856 .. 3117869 +  -4.5   -2.8007   CGGTTTCCGGGGCTG               GTCGT GCTG GCGAC                TGCTTGCTGCGTTCC  43 183
JLK41_RS14915 NONE
JLK41_RS14920 3119949 .. 3119972 +   -11   -3.8591   GGGCTAACTGAAACT          CGGTCCGGCTG GTA CAGC-GGGCCG          TTGTTGCTTGTACAC  82 50
JLK41_RS14925 3121890 .. 3121919 + -12.1  -3.81146   CGGCGCGCACCAACA       GCCG-CGCCCGGAT GTG GTCCGGGCTACGGC       TTGTTGGTTGAGGAG  85 69
JLK41_RS14945 NONE
JLK41_RS14950 NONE
JLK41_RS14955 3127876 .. 3127887 +  -4.4  -4.15006   CTCATTTTTCAATAA                GAAC AGTC GTTC                 TTTTGCGATGCCTGT  65 497
JLK41_RS14960 NONE
JLK41_RS14965 NONE
JLK41_RS14970 3129980 .. 3130003 + -12.4  -4.66953   GCATCCAAACCAAAA          CCCATGCGGA TCAG TCCGCACGGG           TTTTTGGGGTATTCG 100 45
JLK41_RS14975 NONE
JLK41_RS14980 3131065 .. 3131076 +  -7.2  -3.13403   AAGGTGGATAATGTC                CGCC GCAA GGCG                 TGTTCATGACCCAGA  54 199
JLK41_RS14985 3131431 .. 3131455 + -13.5  -3.51924   AGCACCGATGTGCCG          GCTGCTGCGGG TAT CACGCAGCGGC          TTCTATGCCTGGCAG  86 81
JLK41_RS14990 3131956 .. 3131970 +  -3.4  -4.07568   ATTGATAATTTCATC               GTCGCC AGT GGCTGC               TTTTGGCCGGAAGCA  59 36
JLK41_RS15005 3137295 .. 3137320 + -14.7  -2.99471   TGATGCTCCGCCAAA         CCACGGGCGAC CCTG GTCGCCCGTGC          TGTCTGTCCACCTGC  80 38
JLK41_RS15010 3138645 .. 3138677 + -10.6  -3.15996   CACGCCCTGTGAACC     TGCA-CGGGCC-CGGC TAC GCTGTGGCCCGCTGCG     TCTTCCTGCCTGATA  65 42
JLK41_RS15015 NONE
JLK41_RS15020 3140672 .. 3140697 + -11.1  -3.09516   CCCACCGAGGTTTAT         GGCGGTCCGTGA CCA TCCCGG-CCGCC         TTGCCTGCTCGGCCA  68 14
JLK41_RS15025 3142402 .. 3142414 +  -4.8  -3.53444   TAGAGCCATCGGCGC                CAGC CAGAC GCTG                TTTCCAGCGCACTGG  52 186
JLK41_RS15030 NONE
JLK41_RS15035 3145768 .. 3145788 + -11.8  -5.08824   TCGTCGTGAAGCCTT            GCCGGGCC GAATA GGCTCGGC            TTTTTTGCCTACAGG 100 66
JLK41_RS15040 3147057 .. 3147067 +  -2.4  -3.92592   CGTCTTCAGCTCACT                 GCTC AGC GCGC                 TTTGCTCTTCGGCGT  56 391
JLK41_RS15055 3152811 .. 3152841 +  -6.6  -3.05384   ATCTGCCGGGGCGGC       CCGCGCATGCGGCG GGC TGCCTGGGGCGCGG       TTCAGTAGCGCCGCG  52 184
JLK41_RS15080 NONE
JLK41_RS15085 3159040 .. 3159054 +  -3.4  -3.66028   GTACTCTTGAGCCTC               CTGCGC AAT GCCCGG               TTGTTCGACGTTGTC  51 89
JLK41_RS15095 3161238 .. 3161266 +  -3.8  -3.16191   GCTCGCTTTGACGCT       CC-CG-TGTCAGCG TCA CGCTGTCGTCGTGG       TTGGTCACCATCTCC  45 140
JLK41_RS15105 3163696 .. 3163711 + -11.8  -3.54414   CCGGAAAATGAAAAA              GCCCGC GAAA GCGGGC               TCTTTCATTGGCGCT  74 48
JLK41_RS15115 3165403 .. 3165439 +  -8.6  -3.30701   CGCCCAGGCGCTCAC   CGAGGCCCGCCAGGCTG CGAG CGGTCT-GCGCGCCACG    TTCGGTTTCATCCGC  58 68
JLK41_RS15130 3170863 .. 3170895 + -12.8  -4.56597   GCGGTGCTTTCCTTG     CAACGCAGGC-AGGC AATC GCCTAGCCTGCGTTC      TTTTTCGGGGGAAGC 100 62
JLK41_RS15135 3171559 .. 3171573 + -11.4  -2.80994   GGACCATCACCCGCA               GCCCAC CCA GTGGGC               TGTCCTGCAATTCGA  63 74
JLK41_RS15160 NONE
        queD 3175860 .. 3175877 + -12.7  -5.38054   AGCAGAAACGACAAA             GGCCACC GCAA GGTGGCC              TTTTTGTTTGTGGCC 100 42
JLK41_RS15220 NONE
JLK41_RS15225 3195605 .. 3195622 +  -9.1  -4.77438   AGGGCCCCGTCATAG             CCTCGCT TGCT GGCGAGG              TTTTTGATCCTGCGT 100 40
JLK41_RS15305 3213291 .. 3213320 + -22.3  -4.08706   GATCCAGCCCATCGA       CGAAAACGGCGCC CGAG GGCGCCGTTTTCG        TTTGTCTCATGGACA 100 39
JLK41_RS15370 3227855 .. 3227904 + -13.7  -3.06183   CAGATCGGCCCGTAG CCCGGATGAAATCCGGGAA ACCATGCCCACA CCCCCGGATTTCATCCGGG TTACCTGACCGTGGG  76 449
        exaA 3233460 .. 3233489 + -13.6  -2.52635   ACGCTGACGGCAACA       GGCCTGGCGT-CC TTCGC GGTGCGCCAGGCC       CTTACTCGTAGGAGT  72 34
JLK41_RS15400 3234336 .. 3234374 + -18.2  -4.24342   AGGTGGACAAGCTTC   GCGTTGTCCACCCTACCC ATT GTGTGGGGTGGATGACGC   TTTCTTCATCCACCG 100 62
JLK41_RS15425 NONE
JLK41_RS15430 NONE
JLK41_RS15435 NONE
JLK41_RS15440 3242166 .. 3242222 + -14.1  -4.04209   CCGGCTGAAACGGCG CGCCAGCCCGAGCGGTTGGCGCCTGCC ACG GGCAGTCGGCCGCCGCTCCGCCAGGCC TTTCTACTACTTTGG  95 33
JLK41_RS15445 NONE
JLK41_RS15450 NONE
JLK41_RS15455 3244459 .. 3244482 +  -9.5  -3.21416   CCTGGCGTTGATCTG          CGCCACGGC ATCGAC GCCGTTGCG           TTCGTCGTCGAGGTG  61 423
JLK41_RS15485 3254615 .. 3254655 +  -3.2  -3.14931   CGACTGTTGCAGCCA GAGCATGCCCATG-CCGCT CGCC AGCGGTCAGCAGGATGCTC  TTCGTGCGCCATGCG  45 82
        dctP 3261014 .. 3261039 +  -3.3  -5.19879   TAACGCCAGCCTTGA         GGCAACC CATGCGTCTTAC GGTTGCC          TTTTTCTATTTACAA  84 52
JLK41_RS15520 NONE
JLK41_RS15525 3262960 .. 3262992 + -23.5  -3.31144   GGTTGATTGCGTGAC      GGCACGAGGGCGGGA CTT TCCCGCCCTCGTGCA      TTCTGCACATCGGGG 100 35
        dusA 3264167 .. 3264215 +  -8.8  -3.68988   GCGCGGACACTGAGC CGGCGT-CACCAGGCGATAGCGGC TGC GCC-CTGTCGCCCGGACCATGCCG TTGTCTTCCATGCGC  65 28
         tal 3265592 .. 3265620 + -20.3  -3.76952   GGCCTGAATGAAAAA        AGGGGGCGTCAGC CAC GCTGACGCCCCCC        TTTCGATTACGTCCG 100 34
JLK41_RS15555 3267848 .. 3267864 + -15.1  -5.08824   TGCCCTTACGAAAAA              GGCGGCC CAG GGCCGCC              TTTTTTGCATCCGCC 100 45
JLK41_RS15565 3269091 .. 3269114 +  -5.2  -4.30576   ACACGTGCGTGCGCT          GTTCACCGTC ACCT GACGGTCATC           TTTTGGTCATCCAGC  68 10
JLK41_RS15570 NONE
JLK41_RS15575 3270309 .. 3270326 + -12.7   -4.7373   GCCTCCAGCAGAAAA             TGCCGCC CAAG GGCGGCA              TTTTTCATGGCATCA 100 66
JLK41_RS15595 3275175 .. 3275191 +  -7.9  -3.05384   CCTGATCGGCGAACT              GGCACAG CAG CTGCGCC              TTCAATGGCGGGACC  53 95
JLK41_RS15615 NONE
JLK41_RS15620 3280362 .. 3280391 + -18.6   -3.1706   GAACGACGCGGGAGT       CCGGGC-CGGGCC CCTGC GGCCCGAGCCCGG       TTCATCCCCTCACTT  90 460
        acnA 3284425 .. 3284453 + -10.2  -2.68947   CGCCAACTGACGCAA        ATGCCCTGCTGC TTCCT GCGGCAGGGCGC        CTATTCTTCGTTGGG  60 31
JLK41_RS15640 NONE
JLK41_RS15645 3286695 .. 3286709 +  -4.2  -3.89346   CGGCGACCCGACACG               CGCC TGCATGC GGCG               TTTCTGCAGTACCCA  59 48
JLK41_RS15650 NONE
JLK41_RS15655 NONE
JLK41_RS15660 3288055 .. 3288098 +  -2.4  -2.73124   GTGCCAGGGGTGCGG GAATACCGGCGGAGAA ACGCTGTAATAG TTGACCGCCGGCATTC GTTTGACCACTGCCC  39 89
JLK41_RS15670 NONE
JLK41_RS15675 NONE
JLK41_RS15680 3290130 .. 3290145 + -10.4  -3.28712   CAGCACCTTGTCGCC              CCAGGC GAAG GCCTGG               TTGTCGCACCAGCGG  63 271
JLK41_RS15705 3295053 .. 3295069 +  -7.9  -3.59087   CGCGACCACCGCGTT              CGGCCAG CCG CTGGCAG              TTTGAAAGTCATCTT  64 4
JLK41_RS15710 NONE
JLK41_RS15715 3296836 .. 3296882 + -11.6  -3.17527   CGCTTCACTCGCCCA GGCGCGGGAA-GCGGCTGGCGA TATCC TCACC-GCTGCGTTCCGGCGCC TCTTCCTGCTGGCTC  69 357
JLK41_RS15740 NONE
JLK41_RS15745 3301750 .. 3301766 +  -4.3  -3.53343   TCGGCTTGTCGCTCG              CAGGGTG GAT CGCGCTG              TTTCGAGCCAACGTT  52 125
JLK41_RS15755 3303772 .. 3303784 +  -4.8  -2.72144   CACCCTCGTGCCGCA                CAGC AAATC GCTG                ATTTGACGCACGTCG  43 7
JLK41_RS15760 NONE
JLK41_RS15765 3304931 .. 3304950 + -11.4  -3.01712   AAATGAGCATTCGAC            CGGGCTGG CCTG CCAGCCTG             TCTTAAACGACGCAG  68 96
        folE 3305617 .. 3305651 + -15.1  -2.73124   GCTAAGCGGCGGACA    AC-CACGGCCGTTCAC CCGC GTGAACGGCCGTGCGC     ATTTCAGGAGTAGAG  77 36
JLK41_RS15775 3306025 .. 3306076 +  -5.9  -3.33162   CCTACCTCGACCAGC GCTTCGCCGGCTGACGCCAAGCTTTT CGT AGGAGCC-GGC-TT-GCCGGCGATGC TTCTCCGATCAGCTC  52 12
JLK41_RS15800 3315543 .. 3315572 + -20.7  -4.25104   ATCGCTCGCCCCAGC       CAGCCCCGGCCGC ACAA GCGCCCGGGGCTG        TTTTGCTGCACCGCA 100 43
        xdhA NONE
        xdhB 3319920 .. 3319933 +  -5.2  -2.57564   ATCCACCCGCGCGCC               CGGC ACCGGA GCCG                ATTCTCGAGCCGTCG  43 167
        xdhC 3320955 .. 3320987 +    -4  -3.14564   GGGAGACGCGACGAC     CGCT-CGCGCTCGCC CCGT GGCCAGCGCACAGCA      TTGATCAACCCATGA  45 127
        guaD 3322483 .. 3322506 + -13.9  -5.21709   CCGCCCGACAAAAAA          GCCCCGATG CGCGAA CATCGGGGC           TTTTTTCGTATCCAG 100 191
JLK41_RS15830 3325254 .. 3325272 + -13.1  -4.98531   CCGCGCTGATCGCAG             CCCCGGC CTCGT GCCGGGG             TTTTTCGTTTGGCCC 100 52
        puuE NONE
        uraD NONE
JLK41_RS15850 NONE
JLK41_RS15855 3329930 .. 3329962 + -14.2  -5.24531   TCTTTTTACGCCCCG     GAACCGCCGG-CAGC GCGA GCTGACCGGCGGTTG      TTTTTTGTGCACAAT 100 77
JLK41_RS15860 NONE
JLK41_RS15865 3332619 .. 3332646 + -12.6  -3.80094   AGCGGCCGGGTAAAG        GGGGGATCGGCG TTCG CGCCCTTCCCCC         TTCTCTTCGTTTCGG  85 80
JLK41_RS15870 3334545 .. 3334576 +   -18  -3.92522   AACCATCAACGCAGG      GACGAAGCCGGCGC CTGT GCGCCGGCTTTGGC       TTTCTGGCGTTCGAG 100 40
JLK41_RS15885 3337501 .. 3337512 +  -5.8  -3.66784   GAAAAGCGACATCCA                CCCT ACGT AGGG                 TTCTGTTCCGCGTCA  57 255
         gcl NONE
         hyi 3343123 .. 3343140 +  -2.5  -3.16564   GCTTCGCGGGTAAAC             CCGCTCC TACA GGCTCGG              TTCATCACCTACAAC  43 110
JLK41_RS15915 3344214 .. 3344262 +  -6.6  -3.17194   TGTTCGCCCACCCTT TCGACCTTCCTGGCAGGAGGTGT CACG GC-CCGATTGCCAGGTTGGTCGA TTCCATTCCCCAGGT  54 180
JLK41_RS15920 NONE
         pyk 3347263 .. 3347321 +  -5.7  -3.23045   CTGCACAGAGCCGTC GAGCCGCCCGGACGGCGCCCCTCTCCCG CGTA CGGGAGAGGGGC-TGGGGGAGACAGCTC TCTTGGTATATCGAT  50 121
JLK41_RS15930 NONE
JLK41_RS15935 3348734 .. 3348744 +  -2.4  -3.13919   CCCCCCTTCCTGCCT                 AGGC TGT GCCC                 CTTTTCAGATTTCGG  43 81
JLK41_RS15940 3349678 .. 3349692 +  -2.1  -3.62746   ATAGAGTCGCCCGCT              G-GGCT ATAA AGCCGC               CTTTTTTACGCTGAA  49 69
JLK41_RS15945 3351198 .. 3351215 + -14.1  -4.34402   CGCACAAACGAAAAA             CGGCGCC TGCG GGCGCCG              TTTTCATGTGCGGGG 100 49
JLK41_RS16000 NONE
JLK41_RS16005 3360567 .. 3360608 +  -4.4  -3.21099   GCTGCCCCTGCTCAA GG-GGCCGGCGAACTGACCGC CAG GCGCT-GGT-CGGCGGCCTCC TTGCTGCTGGGCAGG  48 10
        flgA 3437193 .. 3437209 +  -2.9  -2.53012   CGATTCCCTACACTG              TTCGACG ACG CGATGAA              ATTAGTCCTAAAGTT  37 69
        flgM 3437608 .. 3437640 +  -8.4  -3.01712   ACTGCTCGACTTCGA     ATCCCAGCGCTAGTC CCAG GGCT-GCGCTGGGGG      TGTTGGACGCCCGAC  56 13
        flgN 3438174 .. 3438188 +  -2.7  -2.83012   AAGCACAGGGACATG               CAGGC ACTTC GCCAG               TATGCTAGTGCCGTT  39 61
JLK41_RS16375 3439053 .. 3439082 +  -4.1   -3.1372   TCCTCGTTCTCGCCT       GGCGCCTCAGGAG CCGG CTCCTGCTGCATC        TGTTCCTGCACCGTC  45 96
        sstT 3443213 .. 3443236 + -13.2  -3.26298   CTGAAACGACAGATA          GAAGGCTTGC GCGT GCAGGCCTTC           TGTATTTCGGCTGGT  78 37
JLK41_RS16395 3444350 .. 3444365 +    -9  -2.71712   CACCAATAACGACGA              GGGCAA GACC TTGCCC               ATTTCACCGACGAAC  55 267
JLK41_RS16420 NONE
JLK41_RS16425 3450993 .. 3451006 +  -3.7  -3.02144   TTCTTTTCCGGTTTC               CGCTC ACTC GTGCG                TCTTAAAGCAAATCA  43 68
JLK41_RS16430 3453497 .. 3453536 +   -23  -3.19463   AGCTGGTAACCAGGT  GC-AAAGCCCGGCACCGCC AAT GGCGCTGCCGGGCTTTTGC  TTGCTGACTGATCAG 100 32
JLK41_RS16435 NONE
        fhuB 3456517 .. 3456537 + -16.9  -4.36903   GCACATCGTCAACGA            CTGGTGCGC ACA GCGCACCAG            TTTCTCTTTGATCGA 100 40
JLK41_RS16475 3482352 .. 3482369 +  -7.1  -3.05384   CGTGATAACTGGCCT             TGAGTAT TTCG ATACTCA              TTGCATACCCCCAAA  52 122
JLK41_RS16480 3483590 .. 3483608 +  -4.4  -2.61582   CCGGTCGACGATTGC             CGGCCGCT GAA GGCGGATG             CTTGTCGCTACGCTC  43 122
        fhuB NONE
JLK41_RS16490 3486801 .. 3486854 +  -9.5  -2.52464   TGCTGCTGCCATCGC CATCGCGCAGGGAGAACAGATGCG TCAGGCC CGCA-CTGGCCTCCCAGCCCGGTG TCAGTTGCCCCGCCA  54 412
JLK41_RS16530 3497369 .. 3497393 +  -4.1  -2.65264   GTCCAGACGAAGGCG          GCGGCGAGC ACGGTCA GCACGCCGG          TGGTATAGGTCGTCA  40 489
JLK41_RS16540 3498444 .. 3498487 + -10.8  -3.34013   GCCAGCCCGAGGTCG CCGCGGTGGGCCGC-GAGGTG AGG CAACACTGCGGCCAGCAGCGG TTCCTTGAAGGCATC  68 56
        metR 3503209 .. 3503250 +  -3.7  -3.53012   AACTCCTGGCTTGCC GCCTCGTGACCAACAGTCAT AGC ATGACCACTGGTCAC-AGCC TTTCGCGGAAAGCCC  49 251
JLK41_RS16560 NONE
JLK41_RS16565 NONE
JLK41_RS16570 3508332 .. 3508356 + -14.4  -4.18494   GCCCCGCAGAAACGA          CAAAGCCCTC CAGGA GAGGGCTTTG          TTTTGCCTGCAGATC 100 189
JLK41_RS16575 3509997 .. 3510011 +  -2.8  -3.89881   ATGAAGTAGATGCCC               GCTG CGACAAT CAGC               TTTCTCCAGCTTGGT  58 185
JLK41_RS16585 3512055 .. 3512071 +  -3.6  -4.39571   CATATTTGAAAAATA              CCCGAC TCCTT GTCGGC              TTTTGCGTTTCTAAA  65 279
JLK41_RS16590 NONE
JLK41_RS16595 3514246 .. 3514258 +  -3.3  -2.89668   GATTAGCTGTCTACC                CTGAG AAG CCCAG                TATATGCGGCTCTTG  42 87
JLK41_RS16600 NONE
JLK41_RS16605 3515310 .. 3515340 +    -9  -3.32844   CTAAACAAATGAAAA       GGGGCTTTTGTATG CTA CAGATACAAGCCCC       TTATGCGCTCAAACA  63 48
JLK41_RS16615 3517649 .. 3517675 + -17.2  -2.92463   CGCTTGTAAAAAACA         GGCGCCTCCGGT GCT GCCGGTGGCGCC         TGTCTGGGTGGTCAG  85 464
JLK41_RS16640 NONE
JLK41_RS16645 3522079 .. 3522108 + -17.3  -3.53224   AGCGGGGACCGAGTA       TGAAAAAGGCCGC ATTC GCGGCCTTTTTCG        TTTGACGGGGAAATC 100 97
JLK41_RS16660 3525338 .. 3525357 +  -4.2  -3.54424   GGGCTACGAAGGCGG            TCAATGCG GTGG CGCACTGG             TTTGGCGAAGTGCGG  52 145
JLK41_RS16690 3536813 .. 3536831 + -13.8  -4.98531   GCGGCGTTGCGCGGA             CGGGGCCT TCA GGGCCCCG             TTTTTCATTTCCCGG 100 41
JLK41_RS16695 3538822 .. 3538859 + -15.5  -2.71011   TTCGCCTGGTATGAG   C-ACGGCGGGCGCCAGCT CGA GGCTGACGCCCGCCGCCG   TGGTTCAGCGCGCCT  79 27
JLK41_RS16705 NONE
JLK41_RS16710 NONE
JLK41_RS16715 3542611 .. 3542627 +    -3  -4.41348   GACTGCCCTGGCGCC             TG-GCGA TGCG TCGCTCA              TTTCTTTCACCAGGC  63 78
JLK41_RS16720 NONE
JLK41_RS16725 NONE
JLK41_RS16730 NONE
JLK41_RS16735 NONE
JLK41_RS16740 NONE
JLK41_RS16745 3549562 .. 3549578 + -10.1  -2.58544   TCAGTAGGTTGTTCA              TCCGGGG CAT TCCCGGA              ATTCTGGAAGTGCGA  60 51
JLK41_RS16750 3550888 .. 3550907 + -16.4  -3.44229   ACACGCATAAAAAAA            CCGCGGCC CTGG GGCCGCGG             TTCTCGTCCTGCGCT  93 346
JLK41_RS16805 3566673 .. 3566696 +  -9.4  -3.14132   GGTCACCGTGGCATT          GCGCGGCCGG TCGG CCAGCAGCGC           TTCCTCGCCGAAGCA  59 498
JLK41_RS16835 NONE
JLK41_RS16840 3575029 .. 3575052 + -16.8  -3.88498   GCAGGCAATAAAAAA          CCCGTCGATC TCGC GATCGACGGG           TTTCGTATATGGCGC 100 182
JLK41_RS16865 3577921 .. 3577937 + -12.3  -2.57931   GATCAACGGTCGTAG              CCCGGAT GTC ATCCGGG              GTTGTCGCGACTCAA  68 76
         ngg NONE
JLK41_RS16875 3581043 .. 3581060 + -12.7  -4.82901   CACGAAGGACGACAG             GGGGAGC TCAG GCTCCCC              TTTTTATGGCCGCCA 100 68
JLK41_RS16880 3583911 .. 3583967 + -11.6  -3.15212   CGCCTGACATCGGCA GAGGCTCGCGGCGGCAGGCGCTC-TG CCTCTAT CATGAGCGCCTGCCACTG-GAGCCCG TTCGCTGTGCTGATT  69 34
JLK41_RS16885 3584512 .. 3584526 +  -3.5  -3.85698   CCAGTCCGCGACAAG              GGC-GC CGAA GCTGCC               TTTCTCGCGACGGAC  57 312
JLK41_RS16905 3588547 .. 3588563 +    -8  -3.37879   AGCCCCTGCCTATAC              TGCGAC ATAAG GTCGCA              TTGATTCGGCTTGGT  59 87
JLK41_RS16910 3589275 .. 3589296 + -13.7  -3.70773   GCGCGTCGACAGCAA           GGGCCGGCA GCGA TGTCGGCCC            TTCTTGCATCTGGGC  91 48
JLK41_RS16915 3590225 .. 3590237 +  -4.8  -2.52543   CAGGCATCCAGCGCG                GCGA ACACC TCGC                TCCATTCGGCGAAGT  42 334
JLK41_RS16930 3593723 .. 3593741 +  -5.2  -3.08798   GGCATCTCTGGGAAG             CAGTGTGG AAC CCGCAGTG             TGTTGACTGAGGCAT  46 218
JLK41_RS16955 NONE
JLK41_RS16960 3599747 .. 3599777 + -17.6  -3.53012   GGCGAACCGGCAAGA       CCAGAACCCCGCGC ACT GCGCGGGGTTTTCG       TTTCAGCCGGAGGAA 100 41
        arsC 3602095 .. 3602111 +  -2.2  -2.53581   GCCCGCCGGAGAAGG              TGCTGG AGCTG CTGGCA              TGAGTTCGCCCTATA  37 6
        wrbA NONE
JLK41_RS16985 NONE
JLK41_RS16990 3604008 .. 3604024 +  -5.1  -3.71284   GTCGCGAGGCACGCA              GCTGC AGGGCGC GCAGC              TTGTCTTCGTCGGAC  57 230
        purM NONE
        purN NONE
JLK41_RS17020 3609569 .. 3609584 + -11.8   -5.4833   ACAGGCAATAAAAAA              CCGGGC AACT GCCCGG               TTTTTTATTGCCTGG 100 45
JLK41_RS17030 NONE
JLK41_RS17035 NONE
JLK41_RS17040 3612191 .. 3612203 +  -9.1  -2.82834   AAGGCAGGCAAACGG                CCAGC ATG GCTGG                TCTAGTCCTGAGCTG  57 41
JLK41_RS17045 3613679 .. 3613705 +  -8.6  -2.65264   GCTCCTTGAGCCCCG         TCGGCGCTGCCG CGA TGGCATCGGCGA         TCATCTGGGTCATGA  52 251
JLK41_RS17055 NONE
JLK41_RS17060 NONE
JLK41_RS17065 3620016 .. 3620039 +  -4.6  -4.11216   AGACCAGCGCCGCCT          GTCGATCA GGCCTGGG TGATCGGC           TTTTCCGGGTACCAG  61 85
        dacB 3622353 .. 3622374 +  -5.1  -3.85698   CCAGCCAGGCCATCA           CATCGCCCTG TTC CAGG-CGCTG           TTTGTCGGAGAAACC  60 394
         rmf 3624911 .. 3624928 + -12.7  -3.81557   CGGGCGCAAGCCCAG             GGGCTCC TTCG GGAGCCC              TATTTATTTACGCAG  85 85
JLK41_RS17100 3627716 .. 3627737 + -12.9  -2.60763   CAAGCAGGTCCATGG           CCGCCCGCC GAAC GGCGAGCGG            GTTGTCCAGTATCGC  67 455
JLK41_RS17120 NONE
        mutS NONE
JLK41_RS17130 3633959 .. 3633977 + -11.7   -4.3208   GCTGCAGAATGCAAA             GACCCGC CAAGT GCGGGTC             TTTTGCATTATGGGA  93 44
JLK41_RS17135 3635425 .. 3635445 + -10.4  -4.69053   ATGAACCAAAAAAAA           G-GGGCGGC TTGC GCCGCCCAC            TTTTATTCCCTAGTC  89 37
JLK41_RS17185 3644977 .. 3644988 +  -4.4  -2.60219   TTCGCCACTCATCAG                CATG AGGA CATG                 GTTATGCAGGTTCTG  43 131
JLK41_RS17190 3645342 .. 3645358 + -12.3  -3.01924   GCTCCGACCACAGGA              CCTGCAG ATA CTGCAGG              TCTTCCGGGCGGGTC  72 52
         map 3672329 .. 3672378 +  -4.6  -2.84325   CCCGCACCTCGGCCT GAGCCCGAGTACGCCCCGAGCG CAACGC CGCGCGGGGCGCACCCCACCAC TCGTATTTAAGGAAG  45 24
JLK41_RS17320 3675305 .. 3675326 + -10.1  -2.78547   CACCGAGGTCTGTTC           CTCGGTGGC AGTG GCCACCGAC            TGGTTCATGCCGTCG  57 233
        dapC 3678451 .. 3678491 + -15.3  -3.83323   AACGACGTCGAAACC  GTCGCGGCCCAAGCCCCTG CCA CAGGGGCCTGGGCCTGGAA  TTTCGGTTGTGTAGC  93 40
JLK41_RS17340 NONE
        dapD 3681827 .. 3681869 +  -8.5  -3.31799   ACTGCGTTGCAATAA GGCTCGAACGCTCA-TTTAC ACCA GTAAACTCCGCGTCCGAGCC TTATCGCGCCTTGTC  59 73
JLK41_RS17350 NONE
JLK41_RS17355 3683872 .. 3683910 +  -5.8  -4.15222   GGCCTGCAGGATGGC   CTGGATGTCGTCGTCGCG CAG CTCGAAGGCGACGCGCAG   TTTCTTCAGCACGAT  64 242
        dapE NONE
JLK41_RS17380 NONE
JLK41_RS17385 3688711 .. 3688730 +  -5.7  -4.13654   ACGATAAAGATCAAA            GGGTTAG ATTCGG CTAGCCC             TTTGTCGTTTCGGAG  65 226
JLK41_RS17425 3695735 .. 3695748 +  -3.7  -3.05844   CGAGGGGATGATCAG               CGCCG TCTC CGGCC                TGTTCAGCTAGCCGC  43 1
        rpsU NONE
JLK41_RS17435 NONE
JLK41_RS17440 NONE
JLK41_RS17445 NONE
JLK41_RS17450 3698137 .. 3698174 +  -6.8  -3.54424   TGAAAGCGGTTCTTG   CCGGCGTGCTTGGCCA CGTACA TGGCCTGGTCCGCCTG    TTTCAGCAGGTCCGC  58 61
JLK41_RS17460 3701225 .. 3701245 +  -2.3  -5.20216   GGTTCTGTTGAACAA            CGGGGGCCG AGG CGTCGACCG            TTTTTTCGTCATGTG  83 134
        plsB NONE
JLK41_RS17470 3704835 .. 3704885 +  -4.2  -3.72576   GATGCTGCGTTGAAA TCGCTCTCAGAATGCTCA-TTTAC AGCAC GTAAACTGCGC-TTCTTCGAGCGA TTTCGTGGGGCCGCC  57 70
        ccoG 3710014 .. 3710038 +  -6.4  -3.18264   CCTCTCTCCCCACGG         GGAGAGG-GTG CAGG CACGCCTCACC          TTGCTCCATCGCCGG  54 79
JLK41_RS17500 3712059 .. 3712077 + -11.6  -3.63515   GTCGGCCAGCAGGTT             GGCGGCCC GTT GCGCCGCC             TTGTTCCAGCTGGCG  75 498
        ubiM 3724012 .. 3724060 + -16.6  -2.79183   CTCACGGCCCGCGCC TGAGCCGCCCCGCGGGCGCGGCG CACC CGGCGCGCCCTCGAC-CGGCTCA TCTGATACGCATCAG  84 23
        ccoN NONE
JLK41_RS17560 3726141 .. 3726151 +  -6.8  -3.41051   TGAGCTCGGCGCTCA                 GGTC GGC GACC                 TTCTGCTCCAGCTGC  56 338
JLK41_RS17580 3730010 .. 3730034 +  -2.8   -2.6927   GCTCAAGGGCGAAAT         GCA-GTGGCCA TGAG TGGCCGCATCC          TGATCTGTGGCGCCT  39 13
JLK41_RS17585 3730947 .. 3730960 +  -3.1  -5.84381   CTCTTCTCCCCCCTT               TCCTGG TTG CC-GGA               TTTTTTTATTCATCG 100 261
JLK41_RS17590 NONE
JLK41_RS17595 NONE
JLK41_RS17600 3732919 .. 3732941 +    -9  -3.01712   CATGGCCCGGCGAAT           CGCGGCGGGG ATG CTCTGCCGGG           TCTTGCGGCACAGCC  57 110
JLK41_RS17610 3734415 .. 3734436 +  -3.7  -3.21276   GGGCGCAACTGGCCA           TCG-GCGGTG AAC CATTGCTCGA           TCTTGTCCGCGCGGC  45 403
JLK41_RS17620 3735696 .. 3735724 + -19.5  -4.08317   GAGCACAATGAAAAA        GCCCCGCCGGGCT TGT GGCCGGGCGGGGC        TTTCGTTTGCCGTTG 100 39
JLK41_RS17650 3743704 .. 3743759 +  -2.5  -2.73364   CAGAACCACGACACC GCCG-GGTACCGCAGCGGTGGATGG AAAAAGCG CCATCCACC-CTACGCAGGCGCGGC TCATTGCAATGACGA  39 220
JLK41_RS17655 3744875 .. 3744896 + -17.3  -4.34402   GCTCCAACACGAAAA           CGCCCGGTG CAAG CACCGGGCG            TTTTCATGTGCAGCG 100 74
JLK41_RS17690 3752884 .. 3752898 +  -2.7  -3.14211   GACCATCAGGTCGCC               CGCCC ATTCA GGGCA               TTCCTGAAAAGGAAT  43 82
JLK41_RS17695 3753812 .. 3753822 +  -6.8  -3.63991   CCTTGCCCAGGCCAT                 GCTG ACG CAGC                 TTGTTGGCGATGGTG  60 211
JLK41_RS17705 NONE
JLK41_RS17710 NONE
JLK41_RS17715 3758055 .. 3758109 +  -6.3  -2.79796   CGCCCGGGTCTGCGT GAACTGAGTCG-GCGGGCGGC-GGTCA CTA TGGCCTGCCGCCTGCCCGCTTCACGGC TATAGTGCGGTCAAC  46 19
JLK41_RS17720 NONE
JLK41_RS17725 3760955 .. 3760997 +  -2.6  -2.57132   CAAGCAGCCAGAACC CGGCCTG-CCGGC-CG-CTCG CCAA CGAGGCGCGCCGCACTGGCCA CTTCTGGAGAAACAA  38 82
        ggpS 3763615 .. 3763628 +  -4.5  -3.31144   CCGCGTACAGCCGTT               CG-GCC TCG GGCACG               TTGTCCACCTGCAGG  49 367
JLK41_RS17765 3770730 .. 3770741 +  -7.2  -3.14132   CTGGAAAAAGCATCG                CCGG CAAG CCGG                 TTCCTACGACCCGGG  54 81
JLK41_RS17770 3771909 .. 3771920 +  -7.2  -3.05816   CAGGGTGGCTCATCC                GGGG ACGG CCCC                 TTCAGTCACCCCTGG  52 135
        sugE 3772445 .. 3772460 +  -3.2  -3.31144   CACCCGCGACCACAG              GCGCTT GAAC AAGCCC               TTGTGCGGGTCACGG  46 213
JLK41_RS17785 3775570 .. 3775606 +  -3.6  -3.86015   AGGCCTCTTCCGGCA   CGC--CCGGACCGTCGTC CTC GACATCGATCCGGCAGCG   TTTGTAGCCCACCTG  57 237
JLK41_RS17800 3781430 .. 3781443 +  -5.9  -3.05384   GCGCGCGTATCTGAG               CGGCG CCCG CGTCG                TTGCCTGGCAGGCCG  49 41
JLK41_RS17805 3783200 .. 3783218 + -13.1  -4.78848   CGAGAGAAAATGAAA             GCCCCGC CTCGT GCGGGGC             TTTTCTATTTCACGA 100 106
JLK41_RS17815 3784896 .. 3784923 +  -9.2  -2.83822   GGGATGCGACCTGTA        GGGTGGACAACGC GCA GC-TTGTCCACCA        TGGTTCTGGCATCAC  59 114
JLK41_RS17820 3785943 .. 3785955 +  -3.3  -4.17089   GTCAACCACTGGAAA                CCGAG GAT CTCGC                TTTTCGCCGTTTCGC  63 477
JLK41_RS17835 3787193 .. 3787203 +  -2.4  -2.83164   GACATGCTTGACTGC                 AGCC AGG GGCC                 TCTGGTGCTCGATGG  40 516
JLK41_RS17845 NONE
JLK41_RS17850 3788964 .. 3788991 +  -4.6  -2.74144   CTGCTCGATCTCCAC        GCCCAGCGCCCG CCAG CGCGCGTAGAGC         ATTTCGACATCCGCC  43 192
JLK41_RS17860 3790034 .. 3790079 +  -2.3  -3.86346   GCGTGGGCGAATGTC CGTCTCCGTGGCTGCCGCCAGG TCG CTAAGC-GCAGCATCCGAGGCG TTTCTGGACAGGTCC  54 52
JLK41_RS17865 3791093 .. 3791145 +  -2.3  -4.11216   AGCACAACCCGCCCG GCACCGCCATGATCCAGTCCCGCAC CGC GAGGATGGCCGGGTCGTGGCGGCGG TTTTCCGGGTAGACC  57 59
JLK41_RS17875 3792868 .. 3792887 +    -7  -2.78384   GAAATCCATCACACG            GCCCGGAC GTCA GCTCGGGC             TATCATCCAGCCCCG  50 103
JLK41_RS17880 NONE
JLK41_RS17885 3793816 .. 3793826 +  -6.8  -3.09492   GTTCGATGCGCAAGC                 GCAG CAG CTGC                 TGTTCGCCTTCGCCG  52 235
JLK41_RS17895 3796039 .. 3796053 +  -8.5  -2.73364   TCAGCACTTGGATTG               CGCGG AATGA CCGCG               TAATTCGGATGACAG  53 142
JLK41_RS17900 3797343 .. 3797380 +  -6.4  -3.49668   GGGCATTGCGGCAAG   CATCAGTGGCATCGATG TTCAC CATC-ATGCCAATGAAG   TTCTCTGAAAAATTT  58 130
JLK41_RS17905 3798103 .. 3798132 + -11.5  -4.56597   GCTATGCGCCACACC       GC-AAGGCCGGC CCGAAAC GCCGGCCTTCGC       TTTTTCCGGGCCGCA  95 82
JLK41_RS17910 3798739 .. 3798751 +  -6.2  -3.53224   CCCCTCATAACGGAC                GGCC CACAA GGCC                TTTCAGCAAGGAATC  55 160
         eco 3799250 .. 3799297 + -17.8  -3.01712   CCGCGCCAGTAAGGC TGTAGGCGGAAGCACCAGCC CCCTTCCC GGCTGGTGCTTCCGCGTGCC TGTTCGACGCCAGCG  89 29
JLK41_RS17920 3800265 .. 3800284 + -10.6  -3.53811   GCTGAGGCCTGACCC            GGCGGCGC GCCT GCACCGCC             TTTGCCCGCCCTGCC  70 36
JLK41_RS17930 3803544 .. 3803556 +  -2.7  -2.86288   GTCTGTTGTATTTTA                TATGA AAT TCATG                ATTTCATCGCATTTC  40 506
JLK41_RS17940 3804042 .. 3804059 +  -4.8  -3.14132   GTTGCTGGGCCTGGA             CGGCAGC ACGGA GC-GCCG             TTGATCACGCCCAGG  48 4
JLK41_RS17945 3806159 .. 3806199 +   -14  -3.05463   ATTCGCACTGATTCA CAGCC-TGCGCCCGCGCGCT TGA AGCGC-CGGGCGCATGGCGC TTGAATAGGCGCCCT  76 30
JLK41_RS17950 NONE
JLK41_RS17960 3808591 .. 3808609 +  -8.8  -2.83164   ATGAACAGCGTCGGG             TCCTGCGC GTC GCGCAGCA             TGTGGTACTCGATGC  54 184
JLK41_RS17970 3809842 .. 3809857 +  -8.2  -3.15544   ACCACAATGGCGCGC              CTGGGC CCGC GCCCGG               TTGATCGCCATCAGC  56 401
JLK41_RS17980 3811749 .. 3811799 + -13.3  -2.55351   CTTGGCCGCATCGTC GCGGTCGAGGTCCTCGAC-ATCCGG CAA CTGGATCGCCGAAGACCCCG-CCGC CTTGCTCTCGCCAAG  67 198
JLK41_RS17990 NONE
JLK41_RS17995 3813573 .. 3813589 +  -4.3  -2.56596   CTTGTCGGGTCGATT              GCGCTAG GCT CTGCCGC              TCAATTCATAGGAGG  43 78
JLK41_RS18000 3813899 .. 3813933 + -10.7  -2.58249   CAGGACTGACCTGCC    GCCAGCGGAGGGCTGT CGAC ACGGCCCTTCGC-GCC     CTTCTCCGCGCTGTC  60 32
JLK41_RS18005 3814576 .. 3814622 +  -8.5  -3.14132   CGGTTCAGATGGCGC CGGGTGCGCGCTGGCGCCAGCT GTCG AGCAGGCGCCCGCCC-CAGACG TTGATCAGCAGCCCG  57 56
JLK41_RS18015 3816789 .. 3816813 +  -9.9  -2.64803   CTGGTCACGGGTTTG          CGCCATCACCG CAG CGGCGATGGCC          TGGCTTTCGCGCTCG  57 436
JLK41_RS18025 NONE
JLK41_RS18030 3818804 .. 3818814 +  -2.4  -4.24342   GTAAGGCCACCCTCG                 ACGC CCG GCGG                 TTTCTTGATCCACGG  60 37
JLK41_RS18035 3819297 .. 3819313 + -10.1  -2.57132   TCAGTAGGTTGTTCA              TCCGGGG CAT TCCCGGA              ATTCTGGAAGCGCGA  60 73
JLK41_RS18040 3820396 .. 3820416 +  -3.2  -3.64703   CTGCCGGGCGCAGCA           GG-CGTGGC CTCG GCAACGGCC            TTTGCCTGGGCGGCG  53 119
JLK41_RS18060 NONE
JLK41_RS18065 3825637 .. 3825656 + -13.6  -3.73953   CGCCGCAACGAAAAA            GGGTTGGC CGAA GCCAACCC             TTTGCTGGAAATGGT  91 465
JLK41_RS18075 NONE
JLK41_RS18080 3827612 .. 3827641 +  -4.3   -3.1996   ATAAACGGCAAAAAA       CATCGGTGTA-GCG TTC CGCCTGTATCGGTG       TTGCATTCCGCTTTG  48 15
JLK41_RS18085 3828667 .. 3828677 +  -8.2  -2.78738   ACTCCTGCAACTGCA                 CGGC TTG GCCG                 TCCTTCAGGTTTTCG  52 347
JLK41_RS18105 3833190 .. 3833200 +  -4.6  -4.15565   GAAGCGTACGAACCT                 GGTC CAG GGCC                 TTTTCGCATCGTCAC  62 308
JLK41_RS18115 3835014 .. 3835036 +  -7.8  -2.70932   GACCAGGCACGCTCA           TCAAGCCA AACAGAC TGGCTTGA           TGATTAGACAACGAG  53 39
JLK41_RS18120 NONE
JLK41_RS18125 NONE
JLK41_RS18130 NONE
JLK41_RS18135 NONE
JLK41_RS18140 3841987 .. 3842000 +  -8.1   -3.9373   TCACTACTTACTATG               GCCTG AGGC CAGGC                TTTACGTTTTAGCTA  69 107
JLK41_RS18145 3842939 .. 3842973 +  -2.8  -4.15565   GTGGAAACGAAGGTC    GGTCA-GGTAG-CGCC CATCT GGCGCCTCCCCTGCCC    TTTTGCACTCGTCCA  59 359
JLK41_RS18165 3845510 .. 3845530 +  -5.4  -3.13164   CCGTCCGGCCCTTGC            CGCACG TCGCGTATC CGTGCG            TTGAGTGATTCCAGC  49 152
JLK41_RS18180 3848561 .. 3848577 +  -7.9  -3.58726   TGCGCCAGTCTGCCG              GGTGCGC TGC GCGCAGC              TTCTGTCTCAGGCCG  64 78
JLK41_RS18190 3852361 .. 3852377 +  -2.2  -2.92192   CGACTACGGCAAGTA             GGC-CGT AACG GCGAGCC              TGTGCTTCACTGAAC  40 25
JLK41_RS18195 3854721 .. 3854779 + -13.9  -2.53392   ACGCCAGCGAACGTA GGGTGGATCACGCTTCAC-CGATCCACCG TTG CGGTGGA-CGTGAAAAGCGACGTCCACCC TACATTCCCGGATTT  72 139
JLK41_RS18210 NONE
JLK41_RS18215 NONE
JLK41_RS18220 NONE
        phnE 3859924 .. 3859935 +  -5.8  -2.62184   CCACTGGACGTACGA                CGAG CGGC CTCG                 TAATGTGGCCCGGCA  46 68
JLK41_RS18230 3861131 .. 3861150 +  -2.2  -3.75105   CCAGTCGGCAGCAAA            TACTGT TCATCCAT ACAGTA             TTCTTGGTGCATTAC  52 103
        imuA NONE
JLK41_RS18240 3863180 .. 3863192 +  -3.3  -2.73364   CAGCAGTGGCCCCCT                GCAGT TGC ACGGC                TGGTTCGCATGAACG  41 1
JLK41_RS18245 3866623 .. 3866640 +  -2.7  -3.72765   GCCATCCATAGTTAT             TTTTACG CGCG CGCAAAA              TTTCACATTTCAGTT  53 379
JLK41_RS18275 NONE
        purU NONE
        folD NONE
JLK41_RS18290 3875134 .. 3875170 +  -6.4  -3.62046   GATCCATTCGGCAGA   CCGCGATGATCGCC-GGC AAG GCCAGGCGCCCC-CGCGG   TTCTTACAACGATCA  60 81
JLK41_RS18295 NONE
JLK41_RS18300 NONE
JLK41_RS18305 3879124 .. 3879169 + -14.1  -2.52516   CCTGCCCTGACACCA CGTGATCCACCCTGCGC GGCCACGACCGA GCGCAGGGTGGATGGCG CTTCATCCTCCAGGA  72 31
JLK41_RS18310 3880058 .. 3880089 +  -8.6  -3.72576   ATCACCCTTTCGCCT      GCTATGCTGCCTTG TGAA CAGGGCAGCGCTGC       TTTCCTGGCAGGAAC  67 109
JLK41_RS18315 3882258 .. 3882282 +  -5.5  -4.07568   CACTCGTGCCGCAAC          GGGCACATGCC GCT GGCACGCGACC          TTTTGCCCCGGCAGA  65 83
JLK41_RS18320 3883873 .. 3883889 +  -2.1  -3.18735   TCGGCGCAGTAAACT              GCGCATC CTC GAACCGC              TTCGTCCCGTCTTCG  43 105
JLK41_RS18325 NONE
JLK41_RS18330 3886129 .. 3886164 +  -4.7  -2.52464   TGCAGCAAGCGGTCG   GCAATGCGCAGCAG-GC TCAG GCACTGCTGCGC-TCGA    TGAGTTCGAAGCCCA  42 45
JLK41_RS18340 NONE
JLK41_RS18345 NONE
JLK41_RS18350 NONE
JLK41_RS18355 NONE
JLK41_RS18360 3892230 .. 3892250 + -14.7  -2.58999   TCGTCGATCCATCCC            GAGCCGCCT TCC GGGCGGCTC            CTTGCTGTATGAGGA  76 56
JLK41_RS18365 3893247 .. 3893277 + -12.4  -3.14602   GCTTCGGCCTCGGCC       GCCTCGTGCGCCTG CCG CAGGCGCTCACGGC       TGTTGGTCAGGTGCA  69 90
JLK41_RS18375 3894991 .. 3895005 +  -5.7   -4.3739   CGATAATACGCCTCC               GTTGC ACCAC GCAAC               TTTTCTCGACGAATA  71 66
JLK41_RS18380 3895438 .. 3895454 + -10.1  -2.57132   TCAGTAGGTTGTTCA              TCCGGGG CAT TCCCGGA              ATTCTGGAAGCGCGA  60 51
JLK41_RS18385 3896530 .. 3896540 +  -8.2  -3.14051   CTGGTTGGCGGCCTG                 GCGC AGC GCGC                 TCTTCATCGCACTGC  56 112
JLK41_RS18395 3899983 .. 3900006 + -16.8  -3.39895   ACATCTGGCTCATGA          GAAAGGGCGC CGTG GCGCCCTTTC           TTCATTCCTGCCCGG  93 44
JLK41_RS18415 3902205 .. 3902221 + -13.7  -5.46657   TCCCGCAGCGCAAAA              CGCCAGC CAT GCTGGCG              TTTTTTATTGCCGTC 100 46
JLK41_RS18425 3904790 .. 3904812 + -20.6  -3.20723   CAGTAAATCGATGCC           CCGGACCCGC CAT GCGGGTCCGG           TTGCGTTCGTGGCCC  95 35
JLK41_RS18430 NONE
JLK41_RS18435 NONE
JLK41_RS18440 NONE
JLK41_RS18445 NONE
JLK41_RS18450 NONE
JLK41_RS18455 3911745 .. 3911763 +  -5.2  -3.28712   CTGGCATCGGCTTTC             CCACACAG ATG TTGCGTGG             TTATGGCCGAGACCG  49 77
        sodB 3912496 .. 3912514 + -13.1  -4.84527   CCGTAATCCGAAGAA             CCCGGCC TCGAT GGCCGGG             TTTTTCGTATCTGCC 100 50
JLK41_RS18475 3916864 .. 3916891 + -18.4  -3.70902   ACCCGCAAACGAAAA        CGCCGCGCCCCT CTGC AGGGACGCGGCG         TTTGCATGTGCGCCA 100 51
JLK41_RS18490 3919960 .. 3919984 + -11.4  -5.64274   CCTGCCCGTGAAGAA         CCGGCGTACCC GTGA GGG-GCGCCGG          TTTTTTTATGCCTGG 100 46
JLK41_RS18505 3925181 .. 3925197 + -10.1  -2.57132   TCAGTAGGTTGTTCA              TCCGGGG CAT TCCCGGA              ATTCTGGAAGCGCGA  60 74
JLK41_RS18510 NONE
JLK41_RS18520 NONE
JLK41_RS18525 3929395 .. 3929415 +  -6.8  -3.31144   TACAGCTGGCCGGCG           CGCTCGGCG ATCT CGC-GGGCG            TTCTGGCCCTGGCGC  54 327
JLK41_RS18540 3931627 .. 3931651 + -11.3  -2.80935   TCCGCCGCGCGCATC          GCCGCGCCCAG CCG CTGGGCGACGC          TGTAATCGCTGGGAT  61 413
JLK41_RS18555 NONE
JLK41_RS18560 NONE
JLK41_RS18565 3935921 .. 3935940 + -13.6  -5.36441   ACGCCGAAAAGCAAA            GAACCCGC CGAG GCGGGTTC             TTTTTTGTCTGCCGG 100 54
        argF NONE
JLK41_RS18590 3942400 .. 3942418 +  -4.4  -3.02511   TGACCGCTGGCGATG             TGGCGGGC GTG GCCGGCGA             TCTTCACCCGCTCGC  45 55
JLK41_RS18610 3946211 .. 3946224 +  -3.8  -2.78384   GCACAGCCACAAGGT               CCAG CTCGAC CTGG                TCTGATGGCCACGCC  41 7
        glpD 3947941 .. 3947957 + -15.1  -5.06414   TTCTGCGTGCCTCAT              GCCCCGC TCT GCGGGGC              TTTTTATTGGGCGAG 100 43
         bfr 3948685 .. 3948702 + -12.7  -5.24531   TCGGCAAGACAGAAA             CGGGAGC CAAG GCTCCCG              TTTTTTGTGGCCGCT 100 47
JLK41_RS18635 3954010 .. 3954034 +  -3.4  -3.61398   CAGGTCGTCGCCGAC          GAAGGGGCGG AACAG CCGCATCTCC          TTCTTCACCAGCGCG  51 219
JLK41_RS18645 3955567 .. 3955580 +  -3.7  -3.40403   CCAGGTGGAAGTGGT               CACGG TGCG CCGCG                TTGTAGTCCGGCCCC  49 109
JLK41_RS18685 3963416 .. 3963431 +  -4.6   -5.0916   CTTCGCCGATCATCT              CGCATC CCTC GAGGCG               TTTTTCTATTACGCC  83 60
JLK41_RS18690 NONE
JLK41_RS18695 3965032 .. 3965055 + -16.8  -4.18164   GCCGAGCGCCATGAA          GAAACCCGCC TGTT GGCGGGTTTC           TTGTTTTCCGGGGTT 100 43
JLK41_RS18745 3975525 .. 3975537 +  -9.1  -3.53012   GGCGCGACACTGGCA                TCCGC CGA GCGGA                TTTCGACGCAGCCAC  64 463
JLK41_RS18755 3979154 .. 3979184 +  -9.6  -3.29511   CGCGCCACTCTGCTG       GGCCTGCTGCGCCT GCC AGTTGCCGTAGGCC       TTGTAGGCCAGTACG  61 465
        dapA 3981169 .. 3981197 +  -6.5  -3.21099   CTTGTCGCAGGGACA        GCCCGGCGGCCAT GGC GTGCCCGCCGAAC        TTGCTGATCAGCCCC  51 475
JLK41_RS18830 3999416 .. 3999436 + -15.4  -3.09516   CAGGCCCAAACGAAA            CCGGCGCC ACTGG GGCGCCGG            TTGCATGCTGACAGA  83 43
JLK41_RS18850 NONE
JLK41_RS18855 NONE
JLK41_RS18860 4005175 .. 4005200 + -16.1  -3.95584   CACCGGCAGAACGCA         CCCCGCCCTCG GCAA CGACGGCGGGG          TTTCGTTCATCCGCG  95 43
JLK41_RS18870 NONE
JLK41_RS18875 4009434 .. 4009449 + -10.4  -5.00616   CCAGAAACGAAAAAA              GCAGCC CGTG GGCTGC               TTTTTTCAGAGAAGC 100 525
        ccsA 4013896 .. 4013907 +  -5.8  -2.60901   ATATCTGAGGCAGCC                GTCG TGGA CGAC                 CTTCATTCGAGCTAT  46 33
JLK41_RS18915 4015588 .. 4015598 +  -4.6  -3.28712   CACACGCCTGGCGCG                 CGGT GAT GCCG                 TTCTCGCCACAGGCA  49 428
JLK41_RS18945 NONE
JLK41_RS18950 4019663 .. 4019677 + -12.8  -4.58395   TCACGCCACGAAAAA               GGCGCC ATC GGCGCC               TTTTTCAGAACTGCA 100 43
        mltF 4026089 .. 4026111 +  -7.1  -3.50853   GAAGAAGAAACCCCG          CC-GCTGTAA GCCC TTACAGCAGG           TTCTGGTTGCCCACC  58 17
JLK41_RS19000 NONE
JLK41_RS19005 4031513 .. 4031524 +  -4.4   -3.5525   AAAATAAATCTGCTC                CGAA TAAC TTCG                 TTTACGCCCGTGTGT  52 206
JLK41_RS19010 4032927 .. 4032958 +  -2.3  -3.42583   TGGCCAGAAGCGAAG      GAAGCTG-ATGGAT GTTGA ATCCATACAGCCAC      TTCTCGGTATCTTCA  46 524
JLK41_RS19030 4037742 .. 4037769 + -15.6   -5.0133   ATCGCTAAACCAGCA        GAAGGCACCGGG TCGC CCCGGTGCCTTG         TTTTTTGCGCCCCTG 100 33
JLK41_RS19040 4039633 .. 4039646 +  -2.3  -3.02043   GGCGACCGCTGACAC               TGCTC ACAG GCGCA                TGTTCGCCCCAGGTT  41 62
JLK41_RS19045 4040588 .. 4040602 +  -4.2  -3.86346   CAAGGCCACAAATGA               CCTCTT TCG ACGAGG               TTTCTGAAACGCTGA  59 511
JLK41_RS19055 NONE
JLK41_RS19060 4045700 .. 4045719 +  -3.4  -3.05343   AGAACGCTTAGAGTT            CGCCTACG GTAG CGTTGGCC             TATTGGAGCTATGAC  43 30
JLK41_RS19065 4046568 .. 4046588 +  -6.8  -2.52464   CGTCCAAGACACCGC            CAGGCAGC AAATA GCTGCCTC            TGGCTTGCAGCCAGG  47 147
JLK41_RS19095 4054813 .. 4054833 +  -6.7  -3.53012   GCCACAGGTGGTCGG            CAGCGCCTC GAC GATGCGCCG            TTTGACCAACCAGCG  58 523
JLK41_RS19110 4056414 .. 4056427 +  -8.1  -2.64099   GACGGAGGTCGCGCC               CGCAG CCCG CTGCG                CTTATCATGCCGCCC  52 39
JLK41_RS19115 NONE
JLK41_RS19120 4058772 .. 4058786 +  -2.1  -3.52779   CGCGCACACGCTGAG              C-CGAG CCCA CTCGCG               TTGCATTTTTTGCAT  47 27
        dctP 4059984 .. 4060004 +   -14  -2.94293   CCCGCCTGACCCCTA            GCGCCCTG GCTGA CAGGGCGC            TGCTTCTCTTGCCCG  75 43
JLK41_RS19130 NONE
JLK41_RS19135 NONE
JLK41_RS19140 4062549 .. 4062568 +  -4.2  -3.57144   TCGGCCTGAACGGCC            G-CTGAGGC GCT GCCACAGGC            TTTCCCGATGCCGGC  54 21
JLK41_RS19145 4063506 .. 4063517 +  -2.2   -4.7373   CACCTGAGCGCTGGG                TTGG CGCG CCGA                 TTTTTGCTAGGGTAC  72 59
JLK41_RS19150 NONE
JLK41_RS19155 4066642 .. 4066659 +    -7  -3.14344   AATCCGTCGCAAGCC             TTGCGC CAAGAA GCGCAA              TTAATCGCCCGCATA  54 50
        leuA 4068591 .. 4068614 + -18.2  -3.51232   AGCAGGCTGAAGAAA          GAACCCCGCC GCTC GGCGGGGTTC           TTCGTTTCAGCAGGG 100 46
JLK41_RS19280 NONE
JLK41_RS19285 4092211 .. 4092224 +  -9.5   -5.4505   ATGAACCATAAAAAA               CGCCC CGAG GGGCG                TTTTTTATTGGCGGC 100 37
JLK41_RS19325 4099424 .. 4099449 + -19.1  -5.04601   GGGCACCACGACATG         GCCCGCAAGAC ATTG GTCTTGCGGGC          TTTTTCATTTCTGCA 100 33
JLK41_RS19330 4099983 .. 4100002 + -12.2  -5.29782   CGCAGCTTTGAAAAA            CCCCTGAT CTTC ATCAGGGG             TTTTTTATGCCTGTC 100 45
JLK41_RS19335 4100647 .. 4100665 + -14.6  -5.65177   GGCACACATGAAAAA             GCCGGTTC AAT GAACCGGC             TTTTTTTGTGGATCT 100 46
JLK41_RS19350 4104546 .. 4104578 +   -12  -5.08088   CCTGCAACCCAACCA     TC-GGGGCACGTCGG AACA TCGACGTGCCCCTGC      TTTTTCTTGCAGCTT 100 45
JLK41_RS19355 NONE
JLK41_RS19360 NONE
JLK41_RS19365 4108563 .. 4108592 + -22.2  -5.00616   CCCCGGCAACACCCA       CAGGCCCGCGCC CTAACC GGCGCGGGCCTG        TTTTTTCCAGGAGGG 100 43
        nhaC 4110213 .. 4110225 +  -4.7  -3.17456   GGATCGCCCTCGCAG                CGCCG CTG CGGCA                TTAAGTCCTTTCCTT  48 69
        nhaD 4112143 .. 4112153 +  -2.4  -3.61398   GAATGAACAGCAGCC                 CCAG CGG CAGG                 TTGTTGACCCAGGCG  48 471
JLK41_RS19385 4113780 .. 4113790 +  -3.2  -3.14132   CAGCCCAGCAGCCCC                 CTGG CAC TCAG                 TTGCTCGCGGGCCAG  44 449
JLK41_RS19395 NONE
JLK41_RS19400 4116470 .. 4116486 +  -9.4  -3.19642   AGTCGGGCGCGACTC              CGAGCG TTCTT CGCTCG              TTCCTGCCTGGTGCT  61 90
        rlmF 4117766 .. 4117776 +  -6.8  -3.36327   GTTTTTCCTCGAGCA                 GCTG CGG CAGC                 TTCTCGATCGACTGC  56 174
        yjeH 4128946 .. 4128993 +  -9.1  -3.14132   TTTCGCGCAAGGCGC TGTCGGTGGACGGGTGAAGCGT CGTCC ACCCTACGCCCGTCAGCCG-CA TTGCTACCGGCCAGC  61 47
JLK41_RS19465 4130499 .. 4130537 + -15.3  -3.18264   CGGTGGATGTAAAAA   GCGACATCCACCCTACG CCGAC CGTAGGGTGGGTCACGC   TTCATCGATCCAGCA  82 121
        yejK NONE
JLK41_RS19475 NONE
JLK41_RS19480 4133082 .. 4133099 +    -4  -3.57144   ACCAGCGGCGGAAGG             CCCGCG AGAACG CGCTGG              TTTCCGAATAGCCGA  51 85
JLK41_RS19490 4136011 .. 4136049 +  -3.1  -3.07816   CTGCCATTCCCCCGA  CAACCT--CACCCCGTGAC CTC GTCACGGGGTGCCAAGGAG  TTACCTCAATGAGCA  43 42
         eat 4137507 .. 4137546 +  -3.2  -2.78679   CGTTCGCTGCGCTGA  CAGGCTCAAGCGGCCGCC CACG GGCGGCCGCGACAGGAGG   ATTTGCATGGCCCGC  41 26
JLK41_RS19500 NONE
        eutC 4139872 .. 4139897 + -14.7  -4.36914   GCTGTCGCGGCTAAA         GCCCCTCCCAC AGTA GTGGCAGGGGC          TTTTCTGGGAGCGGC 100 125
JLK41_RS19530 4143908 .. 4143918 +  -3.2  -3.36581   GCCAGACCGATCATG                 GTGT CGA GCAC                 TTCCTTGACCATTTC  48 285
JLK41_RS19555 NONE
JLK41_RS19560 4151302 .. 4151313 +  -3.6  -4.59109   AGGGAGCGTTGGTTT                TGCC TTCC GGCG                 TTTTTGCCCGGTCTG  70 174
JLK41_RS19565 NONE
JLK41_RS19570 4153551 .. 4153583 + -14.8  -3.18274   TCGGTCCCCTTGACA      GACGCGAGCGAAGC ACTTC GCCACGCTCGCGTC      TTGCATTACACTGGC  82 53
        rhlB 4155097 .. 4155117 + -16.9  -4.98531   CGGCGAGCGAACAAA            GGCGAAGCC TGT GGCTTCGCC            TTTTTCATTTGACCC 100 46
JLK41_RS19580 4156590 .. 4156638 +   -11  -3.20573   CAGTGATTCTCCAGT TTCGGGCT-GCCTCCGACCACGCC AGC GGCGTGGCCGG-GGCGAGCATCAA TGTTCGTGTGGCTGC  69 339
JLK41_RS19600 NONE
JLK41_RS19605 NONE
JLK41_RS19610 4162238 .. 4162255 +  -6.2  -3.01712   GCTCTGCACTGGCCA             GCGTCG CCTCCA CGGCGC              TGTTCGCAGCCCCCG  49 224
        hmpA NONE
JLK41_RS19625 NONE
JLK41_RS19630 4166595 .. 4166609 +  -7.1  -3.40371   GAAGCACTCGCGCCC               GCCCA GCTCG TGGGC               TTCCTTCATCAGGTG  56 204
JLK41_RS19650 NONE
JLK41_RS19655 NONE
JLK41_RS19660 4171829 .. 4171846 + -11.3   -5.1861   GCCTGAAACGAAAAA             GGATCGC CGAG GCGATCC              TTTTTTCATGCTGGG 100 46
JLK41_RS19695 4180599 .. 4180630 + -14.5  -4.58303   GAATCGCCCCAGGGC      CATGCCAGGCCGT ACCTTC ACGGCCTGGCATA       TTTTCTGATCTTTCC 100 102
JLK41_RS19705 4182510 .. 4182530 +  -3.2  -3.39803   ATGCATGAGCACCTC            GTAGGGTG GACAA CGCTCTGC            TTGTCCATCTCGCTG  47 33
JLK41_RS19710 NONE
JLK41_RS19715 4186309 .. 4186327 +   -16  -3.54029   TCCCCCCAAGAGAAA             GGGCCGCA CAA TGCGGCCC             TTCTCGTTACTGCGC  93 143
        ilvY 4201738 .. 4201756 + -13.1  -3.65812   TTTGACCATGAAAAA             GCCCCGC ACGAG GCGGGGC             TTCTGTTCAGCAGGA  82 85
JLK41_RS19800 4205141 .. 4205166 +  -2.5  -3.55447   GCAACTCACGCTCGA         TGAGC-AGCAGA TGC TCGGCCAGCTCA         TTCTCTCGTGCATCC  48 331
JLK41_RS19820 4209942 .. 4209968 + -15.8  -3.54653   TCAGAGGTTGGCCAC         ACCCTGCCGGGC AAA GCCTGGCAGGGC         TTCTATACTGCCGGT  93 46
JLK41_RS19825 4210412 .. 4210423 +  -2.2  -3.04398   ACACTGAGTAGCAGG                CATG CCAA CGTG                 ATTTTCAGCCGCACG  41 87
JLK41_RS19830 4210758 .. 4210768 +  -6.8  -2.72371   GTGATTTACTCGAAC                 GCTG CCG CAGC                 CTATTGTTTCAGGGA  50 60
JLK41_RS19835 4211648 .. 4211666 + -13.1  -4.39571   CCTCCCGACAGAAAA             CCCCGGC CAGAT GCCGGGG             TTTTGCGTTTATGGG 100 47
JLK41_RS19870 4219693 .. 4219711 +  -5.8  -3.31144   ATAATCGGCCTCGCT             GACGGCGC CAC GCGCCACC             TTCTACCCATGGCAG  52 83
JLK41_RS19875 4220456 .. 4220466 +  -6.8  -3.19668   CCTCACGCTTGAGCG                 CGGT GAA ACCG                 TTCAGTTCGCTGATC  52 414
        dksA 4222654 .. 4222673 + -16.4  -3.32997   TTCCTGATCCGACGA            CGGGGCGC TCAG GCGCCCCG             TTGCATTTCTGGGGA  89 34
      gluQRS 4223715 .. 4223733 +  -4.4  -3.53031   CCAGCCCTCAAGCAG             GTGGCCTG AAA CGCGCCGC             TTCCTTTACCATCGC  52 76
JLK41_RS19900 NONE
JLK41_RS19905 NONE
JLK41_RS19910 4228446 .. 4228474 +  -9.6  -5.24129   TATCTCGTAACAAAG       GCCGGGTCTATCG GTAA CGAAA-ACCCGGC        TTTTTTGTCCCCCAC 100 101
JLK41_RS19915 NONE
        folK 4231179 .. 4231208 +  -7.7  -3.73775   CCCATCAGGACTATA       GGCGT-CCCGTCGC CCC GCGCCGGGCGCACC       TTTGATGCCAATCCA  67 187
        panB NONE
JLK41_RS19930 4232968 .. 4232988 + -14.7  -4.67038   GGTTACACTCTGAAA            GGCCCGGAT CAC GTCCGGGCC            TTTTGCTTTTGCGGA 100 59
         pgi 4234777 .. 4234792 +  -3.2  -3.01712   GCCGGCGCCCGCTTG              GGTGCA CCCT TGTGCC               TGTTGCGGACAAACA  43 122
         acs 4236769 .. 4236790 + -18.7  -2.75074   AACCGTTGACCCCGA           GCCCGGCCC GAAA GGGCCGGGC            TGATCTTGCCGTGGG  86 32
JLK41_RS19945 4237722 .. 4237740 +  -2.2  -3.14552   CGCAGCGGCACGACC             CTGCGCGG AAG CCAGGCGG             ATTTCTTGCTAGACT  43 52
JLK41_RS19950 NONE
JLK41_RS19955 NONE
JLK41_RS19960 NONE
JLK41_RS19965 4242458 .. 4242484 + -10.7  -3.57792   TCCCGGATACGGAAA         GGCCCCGCCAG ATTCA CCGGCGAGGCC         TTTCGACATCCGTGC  73 71
        yhbY 4259808 .. 4259852 + -11.5  -3.35679   ACCCAGAGGGTCTGG GCCAGCTGCCAGCTGACAGCGG AGGC CCG-TGACGGCTGGC-GC-GGC TTATACGTGGCGGAC  70 522
        recN 4271608 .. 4271625 + -12.7  -4.72272   CCCAATAAATAAAAA             GGCGACC CGAG GGTCGCC              TTTTTCATCGCAGCA 100 112
JLK41_RS20110 4272673 .. 4272709 + -22.6  -2.78596   GCAGTAACACCCAGA    CATGAAAAAGCCCGGA CTCGC TCCGGGCTTTTTCATG    TCTGCTCGCCACGTG 100 34
        smpB 4275509 .. 4275550 + -11.1  -3.45054   GGACGACTGACAGCG GCTGCGAGCCATGAG-CGCT TTCAC AGCGACTC-TGGCTC-CAGC TTGTAGCTTGTAGCC  74 31
JLK41_RS20140 4278350 .. 4278368 + -17.4  -3.05963   ACAAGGTTCCACTGC             GCCCCGGC CAT GCCGGGGC             TCTTGCCGTCAGGCT  87 43
        lldD NONE
         dld 4281551 .. 4281570 + -16.4  -3.60419   GCTACAAAAAACAAA            GGCCCGCC AATT GGCGGGCC             TTGTCGTTTGCCGCT  93 300
JLK41_RS20175 NONE
JLK41_RS20180 NONE
         pta 4290065 .. 4290083 +  -7.4  -2.58544   TCTTTCAACCGCAAC             GGGGCT CAGCGAA AGCCCC             ATTCTCAGGCTGCCC  49 208
JLK41_RS20190 4291373 .. 4291385 +  -5.5  -3.02043   TAGCCGGTGCCGAAA                TCGTC GAT GGCGA                TCTTCACCCCCAGTT  47 366
JLK41_RS20225 4301487 .. 4301504 + -14.1  -4.80882   GTGATGCATGAAAAA             GCCCGGC TCTG GCCGGGC              TTTTTCATGTCCAGT 100 58
JLK41_RS20240 4304323 .. 4304339 +  -4.4  -4.07568   GCTGCAGCACGGCCA             GCTC-GC GGCT GCTGAGC              TTTTCCGCCAACGGC  62 187
JLK41_RS20265 4313667 .. 4313684 + -14.1   -4.8622   GCCCCTCAAGAAAAA             GCCCCGC AACT GCGGGGC              TTTTTCGTTCAGCGC 100 45
JLK41_RS20275 4315581 .. 4315594 +  -2.4  -3.33922   ATGTCAACGCAGCAG               TACC AACGTA GGTA                GTTTTTCAACGAACT  44 239
JLK41_RS20280 4316802 .. 4316860 +  -8.1  -3.01791   ACCTGCGGTTTGACA AGACCTATGACACGTACAACCTCACCCG GGGG CGGGA-AGGTCGTTCGTGTCATAAGCCG TGTTGACCCGCCCCT  56 187
JLK41_RS20285 4317454 .. 4317464 +  -4.6  -2.63631   CTACCAGGCCCTGAA                 GCTC AGC GGGC                 TGATCTGACGCTTCC  43 7
JLK41_RS20290 4318420 .. 4318455 +  -8.8  -3.06796   CAGGCTACTTTCCCC    CAGCCCCAGCAGAGCG CCGG CGCCCTGCTTGGCCAG     TTCGATACCGTAGGC  55 356
JLK41_RS20300 4321455 .. 4321492 +  -6.2   -3.1372   GCGCGGCCAACTGCT   CGGGCGAGGCCTCGTCG CTCAA CCACAGGGCCT-GCTCG   TGTTCATCGAGAATC  51 185
JLK41_RS20320 4323705 .. 4323736 + -16.6  -2.89564   CTAGGCCTGCAGAAA      TGCAAACGGCAGCC CGAT GGCTGCCGTTCGCG       TCTATCGCATGCCCC  85 37
JLK41_RS20330 4324524 .. 4324542 + -17.4   -4.4078   CAGGACAAATGAAAA             CGCCCCGC AAT GCGGGGCG             TTTTCGTTGCAGGGG 100 46
JLK41_RS20340 4325973 .. 4325983 +  -5.4  -4.25104   CCGCATGGCCGTCCA                 TCTG GTG CAGA                 TTTTCCTGGAGAGAG  68 460
         mqo 4327520 .. 4327535 + -11.8  -5.18357   CGCCCGACAAAAAAA              CCGCCC CTCG GGGCGG               TTTTTTCATGGCTTG 100 43
JLK41_RS20375 4332703 .. 4332723 +   -14  -4.48987   AGGCGCAAACAAAAA            CGCCCCGA ACCAG TCGGGGCG            TTTTCGTTATCGCGG 100 133
JLK41_RS20385 4334371 .. 4334384 +  -2.3  -3.17075   AAAGCCCCATACTTA               CTCCC TACT GGAAG                TTCGCTTCCGCCAAG  43 56
        fxsA 4335104 .. 4335118 +    -7  -4.07568   GCACAGCGCGCCGCA               CCCGGC CCC GCCGGA               TTTTACAAACCCGCC  68 268
JLK41_RS20395 4335478 .. 4335491 +  -5.3  -2.66326   CTGTCGTCGAAGCCT               GATTC CGAC GAATC                TCCGTTTAACCTTCA  46 24
        groL 4337203 .. 4337221 + -13.1   -5.4505   CAGCTGTACCAGGAA             CCCCGCG CCAGT CGCGGGG             TTTTTTATTGCCCGA 100 54
JLK41_RS20405 4338106 .. 4338129 +   -16  -2.66272   CTTGCGTAACCATCC          GGCTGCCGGC CCGT GCCGGCAGTC           TCGCTTTGGCTGCAA  78 32
JLK41_RS20410 4338756 .. 4338776 +  -5.3  -2.78384   GTTCGCTGCATCACT            GATCCAGCC TGA GCCTGGAGC            TATCATCGCCGCCCC  46 88
JLK41_RS20415 NONE
JLK41_RS20420 4339898 .. 4339921 +  -6.6  -3.14132   CCTATCGTCTGGGCG          AAGCGTGACC ACCG GGTCACGCCC           TTGCTCGCAACGAGC  54 85
JLK41_RS20425 NONE
JLK41_RS20430 4342603 .. 4342621 +  -2.2   -4.8622   CTGAGGTGATAGAGC             GGCGGTGC ATG GCGCATCC             TTTTTGCTTCGCCAC  72 96
JLK41_RS20440 4344163 .. 4344194 + -23.2  -3.86346   CGCGATACCCGGAAA      CAGAAAGGCCGGTC ACAA GACCGGCCTTTCTG       TTTATCGCCCGATGC 100 70
JLK41_RS20455 4348418 .. 4348435 +  -3.3  -4.56597   ACAATTCACCAGCAA             GCTGATC AGTT GGACAGC              TTTTTGCAACAGGGC  68 185
JLK41_RS20460 4349317 .. 4349337 + -12.5   -3.1505   TTCTGATGCGCCTCA            CCGACCCGC ACC GAGGGTCGG            TTCCTGCCGCCTGAT  74 35
JLK41_RS20465 4350778 .. 4350822 +  -3.2  -2.64099   ACTGATCGCAAGCCG CGCGACGTGCGGCGAGCTGG CCACT CCGGCACCCTGCGCCGCGCC ATTCTGGTGCGCGGC  40 72
JLK41_RS20470 NONE
JLK41_RS20475 4353594 .. 4353620 + -16.6  -4.93365   GGCCGCGCAGCATGA         CGCCCGCCAG GCTTATA CTGGCGGGCG         TTTTTCATTGTCCGG 100 46
JLK41_RS20480 NONE
JLK41_RS20485 4354778 .. 4354792 +  -5.6  -2.78816   CAGGGTGCCTGGCTG               GCGGAG TAA CTGCGC               TATGCTGAGCCGTCC  46 17
JLK41_RS20490 4355544 .. 4355572 + -17.4  -3.63744   TCGCGCGTGCAGCAT        CAGGGGCGGGCA ACGCC TGCCCGCCCCGG        TCTTTTAGCCGAACG 100 51
JLK41_RS20495 4356608 .. 4356655 +  -6.2  -4.46155   TCGGCGCGCACCAAT GCCGGGCATGGG-CAT-CCGTC ACTCCA GGCGGCAAGCCCCCTGCCAGGC TTTTCTGACTCTCTG  76 372
JLK41_RS20505 4358263 .. 4358281 +  -5.3  -3.24924   CCGCTGCCGCGGCCT            GC-TGACG GAGC CGTCATGC             TGTTATCCCTGCAAC  50 21
JLK41_RS20510 NONE
JLK41_RS20515 4360618 .. 4360632 +  -9.2  -2.71712   GACGCTGATTGATCT               GCCGCG CGC TGCGGC               CTTTAACCCGACGCA  55 283
JLK41_RS20530 4362118 .. 4362159 +  -7.9  -2.78384   CCTGCCCGTTGCGCC GCTGACAGGCGGGAC-GCAT TGC ATGCTGACCCGAAAGTCAGC TATCGTCACCACACG  53 21
JLK41_RS20535 4363726 .. 4363749 +  -2.2  -2.66964   AACAGCGCCACCCTG          TGGGAGGGGC GTTC GCCACGACCA           TCGTGTCCTCCATGC  38 140
JLK41_RS20540 4365158 .. 4365175 +  -7.7  -4.66609   AGAACCGCATCCAGG             GGATCTC GTAC GAGGTCC              TTTTTCGCTGCCCTG  81 147
JLK41_RS20545 4366373 .. 4366398 +  -9.1  -2.71712   GGCATGACTGCGCAG         GGTGGATGA CGCTCTTC TCATCCACC          GTTTCGGCAGCGGAA  57 211
JLK41_RS20550 4367562 .. 4367615 + -26.1  -2.55544   CTGGCCTGAGCAAGA GCGTCGCCGCTGAAGCCCCTCCCAC AACC GTGGGAGGGGCTTTAGCCGCGACCA TAGGTTCAGTGCTCG 100 32
JLK41_RS20600 NONE
JLK41_RS20605 4378293 .. 4378326 +  -8.2  -3.61398   AGCGACGCCAGACAA    CCGC--CCCGGT-GCGC CTG GTGCGACCGGGCAGCGG    TTATTCAGCCGGGCA  64 40
JLK41_RS20610 4379067 .. 4379081 +  -7.8  -3.31208   CAGGCGCTCGAGCAT               GGCCTG AAA CAGGTC               TATCTTGTTCTCGAA  56 476
JLK41_RS20620 NONE
JLK41_RS20625 4383722 .. 4383743 +  -5.8  -3.24924   TAACAACGAGAAGGA           GGTACTGC AATGAG GCAGTCCC            TGTTGTCCCTGGCCG  50 13
        adeC 4385194 .. 4385218 + -19.3  -5.40072   CCTTATCCAACGCGC          CGCCCCCGCAG TCT TTGCGGGGGCG          TTTTTTTGCCGAAGC 100 67
JLK41_RS20655 4390574 .. 4390588 +  -2.8  -2.54896   CGCTGTCGAAACGGG               GGCA TGGCGAT TGCC               TCGATTGGCTGCGAC  38 82
JLK41_RS20660 NONE
JLK41_RS20665 4392639 .. 4392658 +  -4.2   -3.7732   CGATCTGCAGGCCGA            CGGCAGCGA ACT TGGC-GCCG            TTCTTGATCTGCGCG  57 206
JLK41_RS20675 4395044 .. 4395067 +  -4.5  -2.82015   CAAGCTGGCAACGCC          GGGGCATGC GCAACG GCATGCGTC           TATGCTGAGTGTCAG  43 106
JLK41_RS20680 NONE
JLK41_RS20685 NONE
JLK41_RS20690 4397005 .. 4397016 +  -7.2  -3.53012   GGCCAGAACATCTGA                GCGC CATT GCGC                 TTTGGCCGCGAGCGC  58 26
JLK41_RS20710 NONE
JLK41_RS20715 NONE
JLK41_RS20720 4401902 .. 4401914 +  -3.3  -3.95584   CCACGGGTCAGCATC                CCCAG CAA CTGGC                TTTCATTGCTGACCC  58 297
JLK41_RS20735 4404552 .. 4404576 +  -2.1  -3.37796   CAGGAATAGGCACGA         CAGG-GCTGG ACAACG CCACCGCCTG          TTGTCCATGCTCGAC  44 32
JLK41_RS20740 4405863 .. 4405877 +  -2.7  -4.07687   GCGCCTGTTCCTCAC               GCGCC TGCTC GGCCC               TTTTGAAGGCCAGGT  59 514
JLK41_RS20770 NONE
JLK41_RS20775 NONE
JLK41_RS20780 4415824 .. 4415838 +  -3.4  -3.44051   GCTTCCAGGCTGTCC               GGGCGT GGT GCCCCC               TTGTGCTGCTGCAGG  48 88
JLK41_RS20800 NONE
JLK41_RS20805 4421485 .. 4421513 +  -4.3  -4.24948   CCAGGCCGAACAGCT        CCTGCAGGCGCAC CGC GAGTACCGGCGGG        TTTTCCGTGTAATCG  66 270
JLK41_RS20815 NONE
JLK41_RS20820 NONE
JLK41_RS20825 4426631 .. 4426646 +  -8.2  -3.72695   ATCTGTCCGGTGCTG              GCGGTG TTGT CGCCGC               TTTCGTCGCCCGCCT  67 76
JLK41_RS20830 4427400 .. 4427420 + -14.7  -2.78384   AGTACAGGATCACGA            CGCGCTCTG GAT CAGGGCGCG            TATAATGCCAGCCCC  77 52
JLK41_RS20835 NONE
JLK41_RS20840 4428424 .. 4428466 +  -5.3  -2.72344   GCGCGGCCACAGCTC GGGCTCGGC-CAGACGGCGG GCCT CGGCCGGCAGCGTCGGGCCA TCGTTGAGCGTCACG  45 295
JLK41_RS20850 4429984 .. 4430016 + -15.7  -4.65895   GCCAGCCGGTGACAG     CACGGGCGCAGAGC TGGCAT GCTCTGCGCCC-TG      TTTTTCCGTGAGCGG 100 29
JLK41_RS20855 4430963 .. 4430980 +  -2.6  -2.70932   CAGCGTTCGGGCAGT             TGCACC GCCAGG GGTGCC              TCATTGCCCAGCACG  38 505
JLK41_RS20865 4433101 .. 4433121 +  -6.1  -3.21276   TCAGCACCTTCTCGT           CGAGCCCG CTGTAA CGGGC-CG            TCTTCTCCACGGCCA  51 261
JLK41_RS20925 NONE
JLK41_RS20930 NONE
        hemL NONE
JLK41_RS20940 4450590 .. 4450623 + -17.5  -2.87564   CGGTTTATTCCATAA     TGCGCCGGTCGACACG CAT CGCGTCGACCGG-GCA     TGTCTCCCGCCCTGA  85 49
JLK41_RS20945 4451340 .. 4451351 +  -5.8  -3.13432   CGGCATCACGTTGCC                GCCA CCCT TGGC                 TTCGCTGATCTTCGC  49 155
        miaB 4453189 .. 4453228 +  -2.9  -3.44319   GAGACCCTCCACTAA CGTCGCGCTCGCCCACA CTTTGCGT TGTGGGC-AGC-CAGCG  TTATGCTGCCTTCAA  47 26
JLK41_RS20960 NONE
        ybeY NONE
JLK41_RS20970 4455588 .. 4455619 + -14.4  -2.72144   CGGTCAGTCGCTGAC      CCCTCGCCCTCTCC GCCG GGAGAGGGCGAACG       CTTTCCCCCGCCTCG  77 27
         lnt 4457331 .. 4457341 +  -8.2  -2.71364   GCGGATAGGCGAACA                 GGCC GAT GGCC                 TCGTTGAGCAGCTGA  52 154
JLK41_RS20990 NONE
JLK41_RS20995 NONE
JLK41_RS21000 NONE
        arfA NONE
JLK41_RS21010 4464686 .. 4464738 +  -2.7  -2.91276   CCAACACCCAGCTGC TGCAACAGCTGCGCGCAC-GCTGAGCG CAG CGC-CAGCCGTG-GCGCGACAGG-GCA CTTTGTCGACAGACG  40 3
        lipA 4465920 .. 4465937 + -12.7   -4.7497   CACACGAAAGAAAAA             GGGACGC CGCG GCGTCCC              TTTTTCATGCCTGGC 100 47
JLK41_RS21075 4478007 .. 4478019 +  -4.8  -3.06796   GCCCTGTCGCCAGGC                GGCT CCAGA AGCC                TTCGATCAGCTCCAG  45 340
JLK41_RS21085 NONE
JLK41_RS21090 4480733 .. 4480749 +  -8.7  -3.29144   GGCCGGGATCGTCCA              GCTGCAG CAG TTGCAGC              TTCTGCCCCGGCTCC  58 97
JLK41_RS21110 4483073 .. 4483085 +  -3.3  -3.25823   CTACATCGCCGAACC                GCTGA CCC TCTGC                TTCGTCTGAGCCCCC  45 4
JLK41_RS21115 NONE
JLK41_RS21120 NONE
JLK41_RS21125 4485983 .. 4485997 +  -3.5   -3.2963   GACGATGAGGACGAA               GCCTA GGCCA TGGGC               TTCTACGACCGTCAT  47 20
JLK41_RS21130 4486965 .. 4486994 +  -4.1  -3.53012   GACCAGCGTCTCGTC       GTCGTCCAGCCGG TGCA CCAGCTCGATGCC        TTTGGCGCGCCCCAG  51 387
JLK41_RS21160 4492875 .. 4492891 + -12.3  -3.34233   CCTGCTGCACGCTGT              CGAGCAG CAG CTGCTCG              TTGTAGGGCTTCTCG  71 315
JLK41_RS21175 NONE
JLK41_RS21180 4498840 .. 4498866 +  -4.9  -2.63631   CGCTTTTTCGTTCCA         CACGCGCCGCG CTCGT CGCGGCGCCCC         TGCTGTCGAGGTTGC  43 41
JLK41_RS21185 4500672 .. 4500690 + -13.1   -5.4505   AAGGTTGAGCGTGTT             GCGCGGC CTTGC GCCGCGC             TTTTTTATTCAGCAG 100 40
JLK41_RS21190 NONE
JLK41_RS21195 4502925 .. 4502951 + -11.6  -4.40963   CCGGGCCTTGACGTA         GCGGTCATGC AGCGCGA GCATGGCCGC         TTGTTTTTCAGCCGT  93 46
JLK41_RS21200 4503780 .. 4503796 +  -3.5  -3.05463   GCCGCATCCAGCGTA              CGCAGCG TGG CGCAGCC              TTGCATGGCCAGGAT  44 258
JLK41_RS21220 4507513 .. 4507542 +  -5.5  -2.73124   CCCCGGCAAGACAGA       CGCCTGAGGGATG ACGG CGGCCCACAGACG        ATTTCAACCATAGGG  46 19
JLK41_RS21225 NONE
JLK41_RS21230 NONE
JLK41_RS21235 4509733 .. 4509770 +  -9.2  -3.01791   CAGGCTGCAGCGAAG  GCCGTTGCA-AGGC-CCG GCTG CGGCGCTGCTGCAACGGC   TGTTGCAAGGCCAGT  57 115
JLK41_RS21245 NONE
         ppa 4512798 .. 4512814 + -10.8  -5.52096   GACCACCTCCGAAAA              GCCGGC CACAA GCCGGC              TTTTTTATTGCCTTT 100 46
JLK41_RS21255 NONE
JLK41_RS21260 NONE
JLK41_RS21265 NONE
JLK41_RS21270 NONE
JLK41_RS21275 NONE
JLK41_RS21280 NONE
JLK41_RS21285 4521671 .. 4521684 +  -3.8  -3.05384   AGAAAGTTGCTGGTG               GTGG CGCTGT CCAC                TTCGCTCAGGCGCCG  44 355
JLK41_RS21295 4523182 .. 4523192 +  -5.4  -3.85817   ACTTCTCCGCGTGAT                 GAAG CGA CTTC                 TTTGTAGGAGCGGCT  62 27
JLK41_RS21300 NONE
JLK41_RS21305 4524564 .. 4524576 +  -3.3  -3.57144   GACCACATGATCGCC                GCATG AGG CTTGC                TTTACCCCTGCGCCC  51 94
JLK41_RS21310 NONE
JLK41_RS21315 4528884 .. 4528923 +  -7.8  -4.13014   GCGATCTGGTCAGCG  GATTGGGCTGTTTTCCTG GCAT CAGGTAAACTGCCGCATC   TTTTACACCTATAAC  71 43
         dxs 4530902 .. 4530925 + -13.8  -3.36273   GCTTGTCATGCCGCT          GCGCGCGCAC TAAG GTGCGCGCAC           TTCATGTTCCGCCAG  81 77
JLK41_RS21325 4533390 .. 4533405 +  -7.5  -3.28924   GAGCATCTGCAGACT              GGGCC GTTCCA GGCCC               TTGTCCGGCACCGTC  56 290
JLK41_RS21395 NONE
JLK41_RS21400 NONE
        trxA 4545814 .. 4545830 +  -4.5  -3.10611   AGCCGAGCAATAAAG              TTGTTAT AAC GTAACAA              ATTTATTGCCCTCAC  46 514
JLK41_RS21415 4546519 .. 4546547 +  -2.1  -4.07568   CCATTGGCCCGTTCG        AGCGCACGGCTCG CTC CTCGCTGAGCGCA        TTTTCCCGACACGCA  57 86
JLK41_RS21420 NONE
JLK41_RS21425 NONE
JLK41_RS21430 4549204 .. 4549222 + -10.3  -4.81551   CCCAGACATGAAAAA             GCCAGAC ATCAC GTCTGGC             TTTTTCATGTCCGTC 100 105
JLK41_RS21465 4555000 .. 4555027 + -18.6  -4.32034   TAACCCCGGGCAAAA        GAAAAAGCCGGC TTTC GCCGGCTTTTTC         TTTTCCTCCTGCTCA 100 41
        uvrA 4561785 .. 4561804 + -13.6  -5.21236   GAGCGGCAAAAAAAA            GCCAGAGC ATTA GCTCTGGC             TTTTTCTTGTGGCTT 100 59
JLK41_RS21775 NONE
JLK41_RS21780 4609386 .. 4609406 + -15.4   -4.8048   CCGCCTGAACGAAAA            CGCCGCGC ATCGA GCGCGGCG            TTTTTCATCTGGCAA 100 33
        hemJ 4612565 .. 4612579 +  -2.7  -2.57132   GGGCATCGTCATTCT               GGTCG TCGTC CGCCC               CTTCTGAGGAAACCG  38 4
JLK41_RS21810 NONE
JLK41_RS21815 4614835 .. 4614848 +  -3.7  -3.68738   CATTGCCCATCGCTC               GCAGC TCAG GCCGC                TTGTATATTGGCCTC  51 42
JLK41_RS21820 NONE
JLK41_RS21825 4616894 .. 4616907 +  -8.1  -3.30124   CCGGAGTAGCCCTCG               CTGGC CGCC GCCAG                TTGTGCCAGGTCGAA  56 243
JLK41_RS21835 4619141 .. 4619153 +  -4.7  -2.77166   AGTTGCCCTGACCCC                GGACG CCC CGGCC                ACTTTTTTGCAGTAG  43 30
        coq7 4619854 .. 4619877 + -19.6  -2.62184   CCGCATCTGAATGAA          CGAGGGCGCC CATG GGCGCCCTCG           TCGTATCACGCGAAC  88 31
         crp 4621221 .. 4621237 + -13.7  -5.28481   CACGCAATGAAAAAA              GCCGGCT CTG AGCCGGC              TTTTTTCATTGCGTC 100 46
JLK41_RS21945 4643335 .. 4643369 +  -5.4  -3.28924   GCAACAGCGCATCGG     CCCGCTCGCGCTGACG CTG CAGCGGCGTGCGCAGG     TTGTCACGCCCGGTC  51 414
JLK41_RS21965 NONE
JLK41_RS21970 4649608 .. 4649626 + -13.1  -4.93365   ACGCTGTCTGAACGA             GCCCGGC CCTGT GCCGGGC             TTTTTCGTTATCGGC 100 46
        pdxA NONE
        rsmA NONE
        apaG NONE
JLK41_RS21990 NONE
        glpE 4653279 .. 4653297 +  -5.3  -3.30159   CCACTTCCCGAGGCA             CGGTAAC ATTCA GTTATCG             TTGTCCCGCCCTTGA  52 81
JLK41_RS22000 4655476 .. 4655493 + -10.5  -3.36135   GCGGAACGAACGCAA             GCGCTGG TCGC CCGGCGC              TTGCTTGCAGCTTGT  68 71
JLK41_RS22005 NONE
JLK41_RS22010 4658370 .. 4658383 +  -2.3  -2.87319   ACCCACGTCTGGACC               TGGTG ATAC CACCC                ATTTGATCGGTTGCC  40 6
JLK41_RS22015 4658987 .. 4659015 +  -6.6  -3.13566   GCAAGCAGCAGACAA        TCGACTCGGGCT CACGC AGCCCGGGCCAA        TCTTCGATATCCTCT  54 49
JLK41_RS22020 4660684 .. 4660698 +  -2.1  -3.07994   GCGGTCCGGGGCATA              G-CGAC CGTT GTCGGC               TTCGATGAACTTCAG  42 428
        plsY 4661898 .. 4661911 +  -3.7  -3.86015   CGCGATCTGTTCGCC               GGGCG CGAG CGCCG                TTTCTGAACGACCTG  56 5
        rpsU 4663431 .. 4663450 +   -15  -3.27525   CACGCCACGCTCGAA            TGCCCGGC TTCG GCCGGGCA             TTGCATTTACAGAAC  86 48
JLK41_RS22050 4665565 .. 4665582 +  -4.8  -3.09908   CGCCTAAAGCCTGAA             CTGAGG TATAAT CCTCGG              CTTGTTTTCAGCCCG  46 34
        rpoD 4667477 .. 4667508 + -16.6  -3.53444   CCTCGACGAGTGATA      CCAGAACCCCCGGC CCAG GCCGGGGGTTTTGC       TTTCCGGGCACCTGC 100 28
JLK41_RS22060 4671348 .. 4671366 +  -5.2  -2.57683   CGCCGACGAGAGCGC             GCCGGT ATAATCC GCCGGC             CTTCTGGGGGCCTAT  43 16
JLK41_RS22065 4671451 .. 4671482 + -12.4   -4.1585   CGTGTGGGCCCACCA      CCTTCAAAGCCGCGC ATT GCGCGGCTTT-AAGC      TTTTCAGGGTTGTGG  95 26
JLK41_RS22070 4672843 .. 4672853 +  -2.4  -3.68351   TCGGAGTCAGTTTGA                 GGCC GAG GGAC                 TTTCCCTCCTCCAAC  51 196
JLK41_RS22080 NONE
JLK41_RS22085 4674935 .. 4674950 +  -5.4  -4.18197   GCTTTTCTATGGCAG              GCCGTGC GGG GCA-GGC              TTTTGCCTGGCCGGT  68 309
JLK41_RS22090 NONE
JLK41_RS22095 4676046 .. 4676104 + -19.5  -4.43012   TTTTTCGCTTAATTC CCGTGAG-CCGGGCGTGCTGCTGTGCGC GTAA GCGCACGGCAGCACGCCCGGGCGGTTGA TTTTGCTGTTGAGAT 100 364
JLK41_RS22120 4685653 .. 4685666 +  -8.1  -3.19463   CTGAGCGCCTGCAAC               GGGCT CATC AGCCC                TTGATGCGTCATCGC  57 37
JLK41_RS22125 NONE
JLK41_RS22130 NONE
JLK41_RS22135 4690500 .. 4690511 +  -4.4  -4.08767   GGAGGAACTTGCCGT                CTTC GATT GAAG                 TTTTAGCACGCTGCA  61 16
        egtB 4692285 .. 4692301 +  -3.6  -3.57263   GCAGTTCTCCGGCCT              GCGCCT GGCCA AGGAGC              TTTGAGCATGGCACT  51 4
        egtD 4693331 .. 4693357 +  -8.7  -2.71815   GCGGCGTGATCGTCT        G-CCCTCTCCCG CTGG CGAGAGAGGGGC         TCCGTTCTTTGCATC  57 85
JLK41_RS22155 4694502 .. 4694540 +  -5.1  -3.05596   CACTTCACGTCCGCT  GT-GCCGGCGCAGGTGGC GAAT GCAGTCGGCGCCGGAGAC   TTCGGTGCCAAGGTC  47 191
JLK41_RS22165 4696542 .. 4696557 +  -5.4  -3.66178   GATCAGGGTGTGGCG              CTCAGG CGGC CTTGAG               TTTCAGCTTCAGCGC  57 39
JLK41_RS22195 4704426 .. 4704448 +  -3.2  -3.05816   GATGAAATCCGGGGA           GCAGGCGCCA CAA TGGCCCCGGA           TTGCATCCGGGCTAC  43 217
JLK41_RS22200 4706340 .. 4706350 +  -3.2  -3.85698   ATCACCCTGGGCACC                 CTGT TCG GCAG                 TTTCTGACGAGGCAG  56 8
JLK41_RS22205 4708053 .. 4708070 + -10.5  -5.40072   TTGAGCGTGAACTTG             CGGGCCT GAAC GGGCCCG              TTTTTTTGCCCGGAC 100 37
JLK41_RS22220 4711228 .. 4711268 +  -5.1  -2.84687   ACGGCTTCTCCGAAT  GACCCCGCACGCCCCCGGC ACC GCCTGAAACATCCGGGGTC  TATAGTGGTGATTCC  45 24
JLK41_RS22225 4712272 .. 4712288 +    -3  -3.87815   CGCCCAAGCGGTGAC             TG-GCGT GACG ACGCACA              TTTCTCCAGCTGCCA  56 429
JLK41_RS22245 NONE
JLK41_RS22250 NONE
JLK41_RS22255 4717170 .. 4717182 +  -3.3  -3.61646   GTCCTGGTGGCTGTC                CAGTG TGT CCCTG                TTCGTTTGTGCGCTT  51 176
JLK41_RS22260 4718185 .. 4718198 +  -3.7  -3.31144   AGCTCCTGCGCTTGT               GCAGC GAAC GCAGC                TTGTAGCGCTCGCCC  47 93
JLK41_RS22295 4726992 .. 4727034 +  -7.5  -3.29471   CGCGGTCAGCGGCTG GGTGAAC-TCGGCGAGGCCG GCAT CGGCCGCGGCGACGAACGCC TTGATCTCGTCGGAC  56 395
JLK41_RS22355 NONE
JLK41_RS22360 4741022 .. 4741052 +  -8.9  -3.80733   ACGGCTGACTTGACG       TGCCGGGCGCAGT CACGC ACCGTGCCCGACA       TTCTTCTCGCCTGCC  71 33
JLK41_RS22365 NONE
JLK41_RS22370 4742975 .. 4743033 + -16.3   -2.7566   GGAGATGGAGCCTTC --GCGGCTGAAGCCGCTCCTACCGGTGT TCGCCT GTGCC-GTAGGAGCGGCTTCAGCCGCGA TGCTTGCCGTTCCAT  79 111
        rarD 4744321 .. 4744363 +  -8.3  -3.86015   TTTTTAGCCAGATAA C-GAAAAGCCCCGGCGCACT AGGT GGTGCGTCGGGGCTCCCCAG TTTATCCACAGGCTG  69 201
JLK41_RS22390 4747963 .. 4747978 + -11.8   -5.4505   GCAGGTATGAAAAAA              CCGCCC CTCG GGGCGG               TTTTTTATTGGACGG 100 51
JLK41_RS22400 NONE
JLK41_RS22405 4753292 .. 4753302 +  -8.2  -3.61517   CCAGGCCATCACCCA                 CCGC GAA GCGG                 TTCTTCACCCGCACT  62 410
JLK41_RS22450 4762367 .. 4762381 +  -3.5  -2.53263   TGCCGGTCAGCGTCT               GCTAC GTGGA GTGGC               TCGATTGAACCTGCG  40 3
JLK41_RS22455 NONE
JLK41_RS22460 NONE
JLK41_RS22465 4766038 .. 4766055 + -14.1  -3.05384   TCGATACACGACGAA             GGCGCCC GGAT GGGCGCC              TTCAGTCGAAGCGCA  76 111
JLK41_RS22470 4766849 .. 4766884 + -13.4  -2.52464   GAGACGCTTCAGTCG    CGTAGGGTGGACAACGC GAA GC-TTGTCCACCCTGCC    TGGCTTGAGCGCAGC  72 306
JLK41_RS22500 4773862 .. 4773872 +  -5.4  -3.16564   CGACGATACGGTCCT                 GATC GGT GATC                 TTGCTCAGATCGACG  49 120
JLK41_RS22510 4776045 .. 4776068 +  -3.7  -3.37091   CGACCTGCGCCACGA          CGCCCAGCC ATGACC GGCTTGTCG           TTCGGTTTTCCGAAT  47 13
JLK41_RS22515 4777256 .. 4777284 +  -4.3  -2.77899   GTGACGGCGCGGGGA        CTCCGGGGAGGCC TGC GGCCTCCCCAACC        TAATTCCTGACGAAG  43 69
JLK41_RS22520 NONE
JLK41_RS22525 NONE
JLK41_RS22530 4779601 .. 4779639 + -15.9  -2.62184   GCACTGAGCGCCCAC   GGACGCCGCCGGGTGCG CACGC CGCACCCGGCGCGGTGC   TCATCTGGCCAGACA  78 34
JLK41_RS22535 NONE
JLK41_RS22540 4783202 .. 4783234 +  -7.7  -3.06796   AATGCTCAGGCTGCC     GATCTTGGCGGCGG CATCGA CCG-CGCCCGGATC      TTCGGTCACGTACAG  53 379
JLK41_RS22585 4794739 .. 4794760 +  -9.3  -2.73364   CGGCACTTCCGGCGC           GTCGGCCGC CTCG GCGGCCAGC            TCCTTGACCTCGGCA  55 395
        gbcA 4797253 .. 4797277 + -13.6  -5.07652   GGCAGATACGCAAAA         CCCCGG-CTCC GCAT GGAGGCCGGGG          TTTTCTTTTGCCGAA 100 115
        glnA 4802554 .. 4802580 + -20.8  -5.37593   GTGGCGCGTTCGAAA         GCCCCGCCCGGC CCT GCCAGGCGGGGC         TTTTTTCATTTCAGA 100 63
JLK41_RS22615 NONE
JLK41_RS22620 4803857 .. 4803869 +  -3.3  -3.78934   ACCCAAGGAAGACGT                GAGCA TCC TGCCC                TTCTTCTGACAGAGC  54 4
        glnL NONE
        ntrC 4806605 .. 4806624 + -13.6  -4.54727   CGAGTCACGAAAAAA            GGGCATCC CACA GGATGCCC             TTTTCATTTCCCCGG 100 47
JLK41_RS22640 NONE
JLK41_RS22645 4809768 .. 4809780 +  -6.2  -3.65046   GATGATGCGGTCCAG                CGCC TGGTT GGCG                TTGTTGGCGTGCAGG  59 429
JLK41_RS22660 NONE
JLK41_RS22665 NONE
JLK41_RS22670 NONE
JLK41_RS22675 4814306 .. 4814321 +  -2.6  -2.63549   GACGCCAGCTTCGCG              TCTCGCA TAA TGC-AGA              ATATTCTTGCGAATG  38 98
JLK41_RS22680 4816470 .. 4816495 +  -4.6  -2.53581   GCACCCCTGGGCGTG         GCGTGGCGCGC AGCTG GAGTGCC-CGC         TCGCTTGCCGCTGTC  42 85
JLK41_RS22685 NONE
        metW NONE
JLK41_RS22695 NONE
        rdgB NONE
        hemW 4820574 .. 4820598 +  -2.8  -3.09516   ATCACCCACTGCAGG         GC-CGCAATCC GGTA GGCTTGTGCGC          TTCGCTCGTGCAGCC  41 41
JLK41_RS22710 NONE
JLK41_RS22715 4821479 .. 4821493 +  -6.4  -3.17075   GGCCTGGTCGCGCCC               CTGAGG CGG CTTCAG               TTGCCTTCGCGGCGC  54 22
        mtgA 4826750 .. 4826777 +    -9  -2.78384   CGGCTGCGAAAGGCC        TTGCGCGGCAGC GCAT GCAGCAGCGCGA         TGTCGTCACCACGCA  57 51
JLK41_RS22775 NONE
JLK41_RS22780 NONE
        rsmD 4835073 .. 4835116 +  -3.7  -3.38281   TGGCGAGGCAAGCGC CATCCACCCGACCAGGC CACGCTGAAC GCCATGCAGGGTGGATG TTGCCTTTTACATCC  47 59
JLK41_RS22790 4836282 .. 4836312 +  -3.9  -2.87881   GCAGACGACCGTACA      GCGCC-T-CGACCGC CTC GCGTGCGGAGGGCGC      TATGTAGCCGCCTTC  43 143
JLK41_RS22800 NONE
JLK41_RS22805 NONE
JLK41_RS22810 4841017 .. 4841030 +  -2.3  -3.21276   GACCCGCCAGGACGT               CCCGA TGAA TCGAG                TGTTATACCCCGGCA  43 127
        coaD 4841691 .. 4841719 +  -2.9  -4.29302   CCTCATCGTTGTCTG        CCAGTGTCGCGGC GTC GCCTCGACAGGAG        TTGTTTTCATGTCCC  63 213
JLK41_RS22820 4842048 .. 4842066 +  -8.8  -2.70932   CCATCGCCAGGCCAG             GGCTGCTA AGC TTGCAGCC             TCCTTCAGCCGCCCC  57 94
         ggt 4843836 .. 4843847 +  -2.2  -3.80573   CGGGCCGCTACGAGA                GCTT GATC AGGC                 TTTCCTGCTCGTCGC  52 99
JLK41_RS22855 4850066 .. 4850093 + -10.6  -3.60839   CCTGCATGGCAGAGC        GCTAGCAGATGA CCGT TCATCGGCTGGC         TTGCTTATTGCTTTT  73 148
JLK41_RS22860 NONE
JLK41_RS22865 4852439 .. 4852452 +  -4.5  -3.73072   TAAGCGCCAGCCCCT               GCTCT CCCC GGAGC                TTTCGTGGGAGGGTT  57 38
JLK41_RS22870 NONE
JLK41_RS22875 NONE
JLK41_RS22880 NONE
JLK41_RS22885 4857285 .. 4857313 +    -3  -3.18582   GACCATCCTGACAGC        CATGAACGGGTA GCCAA TACCCGCTCCCG        TTGCTCGATGGAGTG  43 115
JLK41_RS22890 NONE
JLK41_RS22895 NONE
JLK41_RS22900 NONE
JLK41_RS22905 NONE
JLK41_RS22910 NONE
JLK41_RS22915 NONE
JLK41_RS22920 NONE
JLK41_RS22925 NONE
JLK41_RS22930 NONE
JLK41_RS22935 NONE
JLK41_RS22940 4868660 .. 4868671 +  -3.6   -3.5944   CTGCGCAACGAACGC                GGCT GAGC GGCC                 TTTGCCCGTCTGCCT  51 20
        ilvD 4870925 .. 4870939 +  -3.4  -5.06414   AGGAACAGCACTACG               GCCTTG CTG CCGGGC               TTTTTCTTGCCCAAG  80 257
JLK41_RS22950 4871560 .. 4871593 +  -2.3  -4.72846   AAGGCCCCTTGAAAA     ACGCCG-CTGCCGAGA CCA TCTAGGCAGGTAGCGC     TTTTTCAATGTCTCG  72 111
        gloA 4872171 .. 4872202 +   -26  -3.14344   GCCCGCGACGCCCGA      CGAGGGGCTGCCTC CTGC GAGGCAGCCCCTCG       TTCGTCGAGCCACTC 100 48
JLK41_RS22970 4874757 .. 4874784 +  -7.7  -2.64416   CGCCTGCGCGAACAG        CGCTGATTCGC ACGGGG GCGGATCAGGG         GTTATCCTCAAGCTC  52 20
JLK41_RS22975 NONE
JLK41_RS22980 NONE
JLK41_RS22985 4878125 .. 4878179 +  -8.6  -2.96274   ATGATGCCCAGCACC GC-GCGGCTGATCGGCTCGCGCAGCGG GCTG CCGCTGCGC-ACCAGAA-AGCCGTAGC TCTGGTTCTCGAAGG  55 74
JLK41_RS23010 4882656 .. 4882668 +  -3.3  -3.91897   CGGCCCCGGCCCTAT                GCCCA CCA TGCGC                TTTGTGGATCGAGGC  56 228
JLK41_RS23050 4895170 .. 4895180 +  -2.4  -4.52415   ACAGCTTCCAGTGAG                 CCTG TAG CTGG                 TTTCTTCTTATAGAT  66 27
JLK41_RS23055 NONE
        tssA NONE
        tssB NONE
        tssC 4898984 .. 4898995 +  -5.8  -3.96506   TCTGGTTCTTCGCAG                GCGA CCAG TCGC                 TTCTCTTTTCACCTA  62 291
JLK41_RS23075 NONE
JLK41_RS23080 4901381 .. 4901392 +  -4.4  -2.84276   TAGTAATCGTAGCCA                TAGC AGTC GCTA                 TCCTTAGTTAGCAAT  45 230
JLK41_RS23085 4902099 .. 4902142 +  -7.3  -3.78329   GAACGGATTCGCAAG CCTGGCCCTGGCC-GTCCGC ACGAC GCACACAGGCCAGGGCCACA TTTGCCTTAGTGACC  63 101
JLK41_RS23090 NONE
        tssE NONE
        tssF NONE
        tssG NONE
JLK41_RS23110 NONE
        tssH 4909996 .. 4910012 + -10.1  -2.57463   GCTGGCTCGCCGGGT              TCCGCGG AGG CTGCGGA              CTTGTAGACAGGATT  60 95
        tssI NONE
JLK41_RS23125 NONE
JLK41_RS23130 4918690 .. 4918700 +    -4  -3.53012   ACAAAAAATTGGAAA                 TGAA GTA TTCA                 TTTAAAACGAGACCC  49 10
JLK41_RS23135 NONE
JLK41_RS23140 4920024 .. 4920040 +  -2.9  -3.15663   TCCTGAATCAATGTA              ATGGCTT TTG AGGCCAG              TTGCTCGGCATAGGT  44 43
JLK41_RS23150 4922118 .. 4922133 +  -7.5   -5.5112   ACTCGTTGCCCGTCA              CGCGG GGGATG CCGCG               TTTTTTATTGGTCGC  95 121
JLK41_RS23155 4923401 .. 4923417 +  -4.4  -3.60098   AAGGAGATTTTCTGT              CAGCTT TGCCT AGGCTG              TTTGCCCTCAGCCAT  54 53
JLK41_RS23170 4927571 .. 4927595 + -12.1  -2.78384   GCCAGCCGCTGTCGT          GTAGCCCGGAT GCA GTCCGGGCCAC          TCTGCTCAGACGGGC  69 92
        rpiA 4930553 .. 4930584 +  -9.3  -3.08679   GATTGCATCCGGGCT      ACGGCGTCGCCTG ATCGAG CAGGCGGCGCAGC       TCTTCGCTGAGAGGC  60 106
        cadR NONE
JLK41_RS23205 4934369 .. 4934379 +  -8.2  -3.61922   TCACGGACGAACAGG                 CGCG CAT CGCG                 TTTCGGGTCGGTGTT  62 281
        serA 4940211 .. 4940228 + -12.7   -4.8622   CGCAGCCAGCAAGAA             GGGAGGC CTCG GCCTCCC              TTTTTCATTGCGCGC 100 47
JLK41_RS23245 4941727 .. 4941740 +  -3.8  -2.73364   GCGCGCCACCCTGCT               CGAC CTGCCA GTCG                TCATTGAGGTAGAAC  41 260
JLK41_RS23255 4943225 .. 4943244 +  -2.8  -2.80816   CGTCATGTCCTGCTC            GCCCTGC ACGATCA GC-GGGC            TGTACTGGCTGCGCC  41 187
JLK41_RS23265 4945006 .. 4945044 + -10.3  -3.05844   GGTTGCTGCCCAGGG  CCTGCGCGCACG-CCTGCA GCG TGCAGGTCGTG-GCGCCGA  TATTGAGCTCCAGCC  60 323
JLK41_RS23275 4948557 .. 4948567 +  -8.2  -4.20367   TGGTACAGGCAGGCC                 GGGG AAT CCCC                 TTCTTTATTCGACGC  75 291
        trmL 4949710 .. 4949725 + -11.8  -5.14563   GCGGATAAAGAAAAA              GCGCCC CTGA GGGCGC               TTTTTTCATCCGAGC 100 42
JLK41_RS23305 4952709 .. 4952734 + -13.9  -5.75342   ACAGAAAACAAGAAA         CGCCCCGCGCC ATGA GGCCTGGGGCG          TTTTTTTTGCCCGGC 100 112
JLK41_RS23310 4954022 .. 4954037 +  -3.2  -3.25088   GCACAGTGGTGCCGC              GCGC AGGGATAA GCGC               TTCATCCATTTAGGA  45 14
JLK41_RS23315 4955396 .. 4955423 +   -20  -4.45544   ATCGTGATGCAAGAA        CGCCGCAGTTTC TCGC GAAACTGCGGCG         TTTTCATTGCTGCCG 100 46
JLK41_RS23365 NONE
        mutY NONE
JLK41_RS23375 4967079 .. 4967093 +  -2.7  -4.42386   CCCACGCGCGACCCG               GCCGG CCCTC CCCGC               TTTTCTCGCTCACGG  63 87
JLK41_RS23380 4967315 .. 4967330 +  -7.5   -5.4833   GAAAGCCTCGAAAAA              CCGGC CGCTGA GCCGG               TTTTTTATTGCCTGC  95 73
JLK41_RS23385 NONE
JLK41_RS23390 NONE
JLK41_RS23395 NONE
JLK41_RS23400 4973164 .. 4973185 +  -4.5  -3.85698   TAAGGATTTATTTGA           TCGTTAATT GACG AATTAACGC            TTTCTCGCCCCGACA  59 38
JLK41_RS23405 4976504 .. 4976524 + -10.4  -4.61873   CAGCAACTGGCGCTT            GCCTCAGC AATGC GCTGGGGC            TTTTGCTTTCTGCCC  89 47
JLK41_RS23410 NONE
JLK41_RS23415 NONE
JLK41_RS23420 NONE
JLK41_RS23425 NONE
JLK41_RS23430 4980964 .. 4981009 +  -2.5  -3.85698   GCTGCTGGTCGCCGA GCA-CGCCTGAGTTGCACACAG AAG CTGTGGATAACTCTGTTGATGC TTTCTGGGCAAAAGC  54 16
JLK41_RS23435 4981355 .. 4981374 + -10.7  -5.79595   CCATTTAGTATCAAA            GGCCTGC TCTCAC GCAGGCC             TTTTTTGTTTTACAG 100 38
        rfbB NONE
        rfbA NONE
        rfbC 4983943 .. 4983954 +  -4.4  -2.64099   GAGCGAGGCCGAGAC                CTTC GCAT GAAG                 ATTCTGCTCAGCGGC  43 16
        rfbD 4984890 .. 4984931 + -14.4  -2.78463   GAATCTGCTGCTGCA GACCACTGGCCAGTTGCG CGAGAT CGCGGCTGGCCAGTGAGC  TCTGCTCGGCACCGT  69 103
JLK41_RS23465 NONE
JLK41_RS23470 4990114 .. 4990124 +  -8.2  -4.82901   TCCAGGCCTCGCTGA                 CGCC ACC GGCG                 TTTTTCTCCAAGCCG  91 230
        dctP 4991220 .. 4991261 +   -11  -2.62184   GTAAGGCCGGAGAGC CGTAG-GGTGGG-CAGTATC GCCA GATACTGACCCACCTCGGCG TCCTGTACGCCGACA  64 37
JLK41_RS23480 NONE
        dctM 4993297 .. 4993316 + -12.1  -5.44119   TCGTGTACCCACTCC            GCCCGGC CCTAGT GCCGGGC             TTTTTTTGGCCTGCC 100 70
JLK41_RS23490 4994466 .. 4994494 +  -2.3  -3.01712   GGCCGATACGCTCGG        CGATCTCGGCC GTGGACA GGCCGGCATCC        TCTTGCAGCAGCGCG  41 408
JLK41_RS23505 4997001 .. 4997011 +  -2.4  -2.92192   GGGGTCGGCGGCAAT                 CCCG CAG CGGC                 TATGCTTAGATGCGG  40 142
JLK41_RS23510 NONE
JLK41_RS23515 NONE
JLK41_RS23520 4998931 .. 4998943 +  -3.4  -3.62224   CCGAGTAACTCGCGC                CCAT AAAAA ATGG                TTCTTCGCGGAGTCT  51 33
JLK41_RS23525 5000254 .. 5000278 + -14.4  -4.63218   GATGAACCAAAAAAA          TGCCCGTATC CGGAA GATACGGGCA          TTTTCTTGAGCGCAG 100 36
JLK41_RS23545 NONE
JLK41_RS23550 NONE
JLK41_RS23555 NONE
JLK41_RS23560 NONE
JLK41_RS23565 5014547 .. 5014559 +  -5.5  -3.66018   GGTGAAGGCGGCGGC                CGGCT TGT AGTCG                TTGTTGAGCTGATCG  57 316
JLK41_RS23620 NONE
JLK41_RS23625 5025173 .. 5025185 +  -4.8  -3.01712   CCCTGAACCTGCCAT                GGCT GAAGA AGCC                TCTTCAGCCAGCCAA  46 72
JLK41_RS23630 5026376 .. 5026406 +  -4.5  -3.31461   GGGCTTGCTCACGTA       GTCGTTGGCGCCG CCGTC CAGCGCCAGCACC       TTCTCGCCCTCGCTG  49 461
JLK41_RS23685 5039648 .. 5039675 + -17.8  -5.75342   ACAGAACAGGCAAAG        GCGCCTGGAACC GCAA GGTTTCAGGCGC         TTTTTTTTGCCGCAC 100 298
        nirB NONE
        nirD NONE
JLK41_RS23700 NONE
JLK41_RS23705 5045365 .. 5045388 +  -3.7  -4.00042   CCGACCCACATGGCA          CCCCGCAGG CCTGTC CCTGCGCCG           TTATTTCCTGCGCAG  59 128
JLK41_RS23755 5057117 .. 5057133 +    -8  -3.31144   ACAGCTTGGCGTAAT              GCTCGA ATTCC TCGAGC              TTGTAGGCATCGACG  56 347
JLK41_RS23795 5064190 .. 5064209 +  -3.4  -3.31792   GGGCCAGCTGCTCGA            GGCTGACG AATT CGTCCGGC             TTGTGCCCCTGCTCC  46 190
        modA 5069083 .. 5069107 + -11.4  -3.45839   ACACCCTGTAATGCC          CGTGGCCGGA GCGCA TCCGGCCAGG          TTCGTCTTTCGGAAT  74 30
        modB NONE
        modC NONE
JLK41_RS23835 5072975 .. 5072987 +  -7.7  -3.14344   AGATACGCATACAGG                CCTTC GTC GAAGG                TTCCTGCAGCCACTG  54 380
        oscA NONE
JLK41_RS23855 NONE
        cysT NONE
        cysW NONE
JLK41_RS23870 NONE
JLK41_RS23880 NONE
JLK41_RS23885 5080568 .. 5080589 +  -2.2  -2.66435   GCATTGACCGCGATG           ACCGCCCAG ACGAC CTGG-CGGC           TGATCTGCTGGCGGT  38 207
JLK41_RS23895 5081713 .. 5081736 +  -2.4  -3.62572   AAAGCCCCCGAACGG          TAGCGATTTC CGAC GAAATCACTC           TTTCGGGTCATGCTC  49 23
JLK41_RS23900 5083062 .. 5083103 +  -7.1  -3.09878   AGAGCAGCACGGCGA CCGCCAGCACGATCATCGG GATG CCGATGAAATGGCTGGCGA  TGTTGCGTCGGTCGC  52 512
JLK41_RS23910 NONE
JLK41_RS23915 5086082 .. 5086098 +  -6.5  -2.62184   ATCGCCAGGCGATCC              AGGCTGA CCA TCAGCCA              TAGTGTCGCCAGCAG  49 91
JLK41_RS23930 5089383 .. 5089398 +  -2.4  -3.05816   TCAGCACCGGGCGCA              GGCGCT GCAA GGCCCC               TTCGGTGACGGCTCG  41 275
JLK41_RS23950 5095985 .. 5095995 +  -2.4  -3.14132   GGTGTCGGCTATGTG                 CTGG AGG CCCG                 TTCATGAGGCCCGCC  43 8
JLK41_RS23955 5097662 .. 5097694 +  -4.1  -4.08216   GATGATGGCTGCTGC     CCGGCGGCTCGATC GCCATG GAT-GCGCTGCTGG      TTTTCACGGAACTGC  61 297
JLK41_RS23975 5102079 .. 5102116 + -19.1  -3.62859   GTACGTCTTCTGAGT   G-CGCCGCCGGCAGGTGC CAA GCCCCTGCCGGCGTCGGC   TTTCGCGATTGTAAT 100 28
JLK41_RS23980 5102745 .. 5102763 +  -2.3  -3.90048   GTACCACAGGTACAG            CGGCACAC CCGA GCG-GCCG             TGTTTTTCGAGAAAG  56 238
JLK41_RS23995 5107455 .. 5107487 +  -6.9  -2.58249   CTGTCCGCCGCTGAA      TGGCGCTGAGGAC TCGGGCC GCCCTCAGCGCAG      CTTCTCCAGCATCTG  49 27
JLK41_RS24025 5115738 .. 5115748 +  -6.8  -2.64099   CAAGCGCAACGCACG                 CAGG CCG CCTG                 ATTCTCATGCGCGGC  49 14
JLK41_RS24030 5119048 .. 5119086 +  -4.2  -3.16564   AGGGCGGAGCCGAAA   CTCGCCGCACGCCGCTGC ATG GCATCGTCGATCTGCGCG   TTGCTCAGCTCGCCA  45 263
JLK41_RS24050 5122702 .. 5122714 +  -2.6  -2.61383   GGCTGGGATCGGAAA                CGCC AGACG GGTG                ATTGTGGGTGAGGAT  38 175
       coaBC NONE
         dut 5125215 .. 5125231 +  -9.3  -2.70936   CACGCTGATCGGCGT              GGGCGCC GGC GGCGCGC              TGCTCTGGTTCGTCC  57 197
        algC NONE
        argB 5128584 .. 5128618 + -11.3  -2.52635   CACCATGATCAGCAA     CCGCAAGCGCCCCTG AAAGC CAGCCGCGCTCGCGG     CTTGCTGATGCCCCT  64 10
         xth 5130904 .. 5130920 + -10.8  -4.75372   GCAAGGCATGAAAAA              GCCGGC ATTTC GCCGGC              TTTTTACTGCGTGCT 100 43
JLK41_RS24105 5133107 .. 5133120 +  -8.1  -2.60199   AATATCGAGTAACGT               CAGCC ACAC GGCTG                CTATCTTTCGTTCAA  52 29
         gmk 5133846 .. 5133860 +  -4.2   -3.6707   GCCTTCTTCTAGCTT               GAAGCT TGA AGCTGC               TTTACAATATTCAGT  54 96
        rpoZ NONE
        spoT 5136386 .. 5136410 +  -7.8  -3.28712   CCCATTTCCAGCCTG          TAGGCTGGGT GCTCG ACCCAGCCAG          TTCTCACAAGGAGCG  59 50
JLK41_RS24125 5136818 .. 5136838 + -15.4  -2.57931   TGGAATAAGTCCCGA            GGCGGGGC GCACG GCCCCGCC            CTTCTCCCCCCTGCA  78 33
JLK41_RS24130 NONE
JLK41_RS24150 NONE
        recG NONE
JLK41_RS24160 5145125 .. 5145162 +  -9.1  -3.01712   CACGCGGCGGCCGCT   GCTGCAGGCGCT-GGCGA TAT TCGCCGAGCACTTCCGGC   TGTTCGCCGACCGCC  57 428
JLK41_RS24270 NONE
        fliN NONE
        fliP NONE
JLK41_RS24285 NONE
        fliR NONE
        flhB NONE
        flhA 5171170 .. 5171184 +   -10  -3.07816   CTCACGCCTTCTCCT               TGCGCA GCT TGCGCA               TTCCCTCGATCAGAC  64 108
JLK41_RS24345 5181481 .. 5181499 +  -4.6  -4.10552   AAATCCCTCATAGAC             CCATTACT TGT AGTAATGC             ATTTTTTTTACTCCA  61 315
JLK41_RS24350 NONE
JLK41_RS24355 NONE
JLK41_RS24360 5184557 .. 5184587 + -13.3  -3.86015   CCCTGACCAGTCAGA       CAGGAAACCCGGC CTCGC GCCGGGTTTTCCG       TTTCTGGAACCGGTA  91 42
JLK41_RS24365 5185151 .. 5185187 + -10.9  -4.52589   AGAATTGGGATCTTC    TGAGAGCTCCACCGT CTCTGCT GCGGTGGGGCTTTCG    TTTTATCTGGAACAG  95 62
JLK41_RS24370 5185522 .. 5185532 +  -2.4  -3.31144   AGCGCGAGCAGGAAC                 TGGC CAA GCCC                 TTCTGGCGCTAGGCC  44 3
JLK41_RS24375 5185926 .. 5185937 +  -5.8  -3.32343   CCGATGACCTGACCC                TGGC ACAA GCCA                 TTCTCAGCCTGTAGA  52 0
JLK41_RS24380 NONE
JLK41_RS24385 5188452 .. 5188469 +  -2.6  -2.71144   GCTGCCTACCCAGAT             GTGTCG ATTGGC CGGCGC              TAGTTCCGGCGCATC  38 110
JLK41_RS24395 5190175 .. 5190197 +  -8.4  -3.28712   GCGAGTCGCCGACGC           GACTGAACAG GTG CTGTTCGGCC           TTGTACAGAGGGGCC  58 449
JLK41_RS24405 5191855 .. 5191878 +  -6.6  -3.21416   AAGCATAATTCCTCA          TCGGCCGTCT TTCA GGGGGGCCGA           TTCATGCTGACCCTG  54 84
JLK41_RS24410 NONE
JLK41_RS24440 5201626 .. 5201643 + -14.1   -5.4505   CCGGAAAACGAAAAA             CCGCGGC AGAG GCCGCGG              TTTTTTGTTAGCCGC 100 49
JLK41_RS24450 5203868 .. 5203879 +  -2.2  -2.78816   CTGCGCATCAGCCAC                GTCG ATGA TGAC                 TATGCTCCCGCGTGG  39 53
JLK41_RS24455 5204996 .. 5205014 +   -16  -3.02144   CTCTGAATGCAGGAA             GGCCGCCA GAC TGGCGGCC             TCTTGCAAGCAATGG  83 66
JLK41_RS24460 5205687 .. 5205712 +  -2.5  -2.71144   TGCCGCCGCGCACCT         CGAACTGAAAG CGCG TTTCCAGCTCG          TGCTTGCCGGGCGTG  38 247
JLK41_RS24470 NONE
JLK41_RS24475 5207844 .. 5207866 +  -9.8  -3.14344   CGCTCGCGATAGTGG           TTCACCGCCT GCC AGGCGGTGGC           TTCGTCCAGCCCGTA  62 479
JLK41_RS24485 NONE
JLK41_RS24490 5210354 .. 5210381 + -14.8  -2.62263   CACATGGCGCTGGCC        ACGCCCTTGCCG CGCG CGGCAGGGGCGG         TCATATAGCCGCAGT  71 405
        prlC NONE
JLK41_RS24510 5213647 .. 5213662 +  -5.4  -2.52464   AGCCCAGCGAGTAGT              CCCT-CG CGC CGTAGGG              TGGGTTAGCGGCGCC  45 27
JLK41_RS24520 5215735 .. 5215754 +  -3.6  -4.07687   GCCCGGGCGCCAGAT            AACTGTAT TTTT ATACAGTA             TTTTCAGGAGCCCGT  59 65
JLK41_RS24525 5216841 .. 5216851 +  -2.4  -3.07344   TGCTCTGACTTGGCA                 GCGG GCA CCGA                 TATGTTAAAACGTGG  41 33
JLK41_RS24530 5217859 .. 5217880 +    -3  -3.12999   CCCAGGCAGTTCCGC           TGCTC-GCC AGGCG GGTTGAGCA           TTGCCTATCGAGTGC  43 84
JLK41_RS24535 NONE
JLK41_RS24540 NONE
JLK41_RS24545 NONE
        ugpC NONE
JLK41_RS24555 NONE
         tal NONE
        xylB 5226411 .. 5226453 + -11.9  -3.57561   CGGCTGCGGAACACC CGGCACTGGCGCAGAGCAACG CCG CGA-GC-CAGCGCCAGGGCCG TTTACGGAGTTGCCC  77 55
JLK41_RS24570 NONE
         pgi 5229221 .. 5229241 +  -3.3  -3.29043   ACTTGCGGTGTGACT           CGCACAGC GCAGCG GCTGT-CG            TTCTAGCAGCGCATT  47 123
JLK41_RS24580 5230067 .. 5230092 +  -6.7  -2.90075   AAAAGGCCGCGCCCC         GCGCAAGCGGT GCTG ATCGCCCGCGC          TGTGCTTGCACACCC  51 82
JLK41_RS24595 5234661 .. 5234683 +  -2.5  -2.92618   ACATTGGCAGTCTGA           GGGTCGCCG CCTGT CGCTGCCCC           GTTCTTGTCTGGGAG  40 63
JLK41_RS24600 5236324 .. 5236350 +   -18  -3.48395   AACACCCCGAACAAA         AACGCCCGGGCA ACC TGCCCGGGCGTC         TTGTGTCCAGCACCT 100 457
JLK41_RS24615 5240174 .. 5240197 +  -3.8  -3.84246   CCCGCCCCGGCCTAT          TCAGC-CGCCC CGA GGTTGTGCTGA          TTTCGTCATTCGCCC  54 43
JLK41_RS24620 NONE
JLK41_RS24625 NONE
JLK41_RS24630 NONE
JLK41_RS24635 5243814 .. 5243828 +    -7  -2.78384   CGAGCACTACCCAGG               CGGCCC CGC GAGCCG               TATGCTCAGGGGCCG  50 48
JLK41_RS24640 5244603 .. 5244621 + -10.2  -3.09492   TATCGCGACGCCCGG             CGCCAGCT CTG AGCAGGCG             TGTTCCGCTTCGGGG  64 14
JLK41_RS24645 NONE
JLK41_RS24650 5247481 .. 5247491 +  -5.4   -3.8186   CAAGGAACCCATTGA                 TCGA TGT TCGA                 TTATTCCTTCCACTG  60 26
JLK41_RS24655 NONE
JLK41_RS24660 NONE
JLK41_RS24665 NONE
JLK41_RS24670 5250657 .. 5250672 +  -5.4  -4.29302   ACCCTGGAAATGAAT              G-GTGCG CTT CGCACGC              TTATTTTCGTATACG  71 104
JLK41_RS24675 NONE
JLK41_RS24680 5253358 .. 5253375 + -14.1  -5.40072   CGCATCCCACCCTCA             GCCCCGG CTTG CCGGGGC              TTTTTTTGCGCAGGC 100 65
JLK41_RS24700 NONE
         zur NONE
        znuC NONE
        znuB 5262748 .. 5262767 +  -3.5  -2.75708   GCGTGAAATCGGCAC            CGCAAAC CTGTAT GATTGCG             CGTTTTTTGCACAAC  41 92
JLK41_RS24735 5263639 .. 5263651 +  -6.2  -3.32963   CGCAGCGCAAGTAGT                GCCG CACAC CGGC                TTCTGCGCTGCAGGT  52 27
JLK41_RS24740 NONE
JLK41_RS24745 NONE
JLK41_RS24750 5266356 .. 5266383 + -18.5  -5.08601   ACCCGTCGTACCCGA        TGCCGCGTGGC CGTCCA GCCACGCGGCA         TTTTTATTGGGATCA 100 52
JLK41_RS24765 5267859 .. 5267871 +  -4.8  -2.91924   GCCTCAGTAGATCAG                GCTG ATGCC CAGC                ATTTCTGCCCGCTGC  45 31
JLK41_RS24785 NONE
        uvrD NONE
JLK41_RS24805 5278399 .. 5278418 + -12.1  -5.07486   GCTGAGCCAATCGAA            CGGGGCC ACTGGA GGCCCCG             TTTTTCTTAGGGATG 100 36
JLK41_RS24810 5279529 .. 5279546 +  -8.3  -3.27298   CTGGCGCTGAATGGA             CGGCGCC TGCG GGCTCCG              TTCGTCGTTCGGGCA  59 31
JLK41_RS24815 5280557 .. 5280575 + -13.1  -4.54727   GCGCAGCATGAAAAA             CCCCGGG CAAGC CCCGGGG             TTTTCGTTTCGGCCC 100 47
JLK41_RS24825 NONE
JLK41_RS24835 NONE
JLK41_RS24840 5285597 .. 5285626 +  -5.6  -3.05816   GTAGCCCGGATGCAA       TCCGGGGACGCTG CCAAA CCGCC-CCCCGGA       TTGCATCCGGGCTAC  49 86
JLK41_RS24860 5288820 .. 5288837 +  -3.3  -3.71848   GGGGCAGCTCAGGGC             GTGGCTG GACT CGCCCAC              TTGTTCCTCGGCGGC  53 390
JLK41_RS24870 5290000 .. 5290026 + -11.5  -3.29461   GCAGCATGGGCGCTG        GCGCGGTCCGGC CATT GCCGG-CGGCGC         TTCTGCGCCCGCTTG  68 494
JLK41_RS24885 5292051 .. 5292070 + -12.8  -5.75945   CTCTTGGTGCTTGAA            GCCGGGGC AGTC GCTCCGGC             TTTTTTTTGCCCCGT 100 122
JLK41_RS24905 NONE
        hisI NONE
        yidD NONE
JLK41_RS24920 NONE
JLK41_RS24925 5298348 .. 5298402 +  -2.8  -3.05384   CAGGTAGTTGCGGTA GC-CCTCCAGCTCGTCGAGCAGGCGCC GTCC GGCGA-TGGTCGGCGAGC-GCATGAGC TTGCGTGCCACGGCG  42 441
JLK41_RS24945 NONE
JLK41_RS24950 5305205 .. 5305239 +  -5.7  -2.62263   GCATACGCCGGTGGG    CGCGC-TGT-GGAGCTG AAG CCGCTCCTACAGGCCCG    TCGTGTCAGCCGAGT  46 10
JLK41_RS24955 5306009 .. 5306021 +  -4.7  -3.14132   GACCATCTCGAAACC                GGCGC AGT GCGCA                TTGATGCGCGGCGCG  47 415
JLK41_RS24965 5308239 .. 5308278 +   -26  -3.14132   TTCGACCGCTAGACG  CGAAAACGCCGCGAACTT GCAA AGGTTCGCGGCGTTTTCG   TTGCTGCCGGGGGAA 100 43
         cls 5313621 .. 5313631 +  -2.4  -3.53444   CCACCCCGGGCGCCT                 GCCG GCG CGAC                 TTTGAACAGGCCTCG  47 85
JLK41_RS24985 5314750 .. 5314772 +  -7.6  -3.31144   GCATGTTCTCCATCA           TCTGGCGCTG CTC CGGCGGCAGG           TTCTGCAACTGCGCC  56 352
JLK41_RS25040 NONE
JLK41_RS25045 5329045 .. 5329068 + -11.6  -4.13767   CGCCTAAGAGCCACG          AGGGGCGGCC GGCC GGTCGCCCCG           TTTTCACCTGCGGAG  84 34
JLK41_RS25050 NONE
JLK41_RS25055 5330826 .. 5330844 +  -2.2  -3.44284   ACCTGCAGTTTCGGC             TCGGTCGC CTG GCTGCCGC             TGTTCTTGCTCACCA  46 146
        cobG 5334365 .. 5334378 +  -2.3   -2.8507   GCCCGCCACCTTCCC               GCAGG ACTC CCTGA                TGCTTGATTACATCC  40 5
JLK41_RS25075 NONE
JLK41_RS25080 5335891 .. 5335912 +  -4.4  -3.73224   GTAGCCCGGATGCAA           TCCGGG AAACACACAC CCCGGA            TTTCATCCGGGCTAC  57 172
        cobJ 5337732 .. 5337769 +  -2.7  -2.77962   CTGCACAAACGTTCT   AGGAATGCCCG-GC AAACGGGTTAA GCTCGGGCGTTCCA   CTTTCCACTGTGAGC  39 159
JLK41_RS25090 NONE
JLK41_RS25095 5339605 .. 5339615 +  -6.8  -3.18582   CGACTGATACCGACA                 CTGG CCG CCAG                 TTGCTCGATACCGTC  52 321
JLK41_RS25105 5341448 .. 5341485 +  -6.1  -3.28712   CCTGAACGGCGAACA   GGCCA-CTGCCCTCGACC AGC GCACGGGTGCGGGTGGCC   TTGTCCAGCACCAGG  53 428
JLK41_RS25120 5343699 .. 5343733 +  -8.5  -4.32177   TTTCTCTTCACCGGG     CCGTTGTGGTTCTGC CAGTC GCAGAGACGCATCGG     TTTCTTCTCGACTCG  77 187
JLK41_RS25125 NONE
JLK41_RS25130 5346699 .. 5346714 +    -6  -3.41229   CCGACGATAACAACG              CACGGC AAGC GCCGGG               TTATAGTCCGGCTCT  52 195
JLK41_RS25135 NONE
JLK41_RS25140 5348144 .. 5348179 +  -6.7  -2.90496   CCACGCTGTCCACAC    CCTGCGGCCAGCCTTC GGCGA GCAGGC-GGCCGGTGG    TGATTTCCACGGCGC  50 428
JLK41_RS25175 NONE
        cobM 5359731 .. 5359748 +  -3.3  -4.15044   CGCATCCACCAGGAA             GAAGCTG CGCC CGGCGTC              TTTCTTGAAGAAGAC  59 360
JLK41_RS25190 NONE
         map 5361029 .. 5361041 +  -4.7  -3.86194   CGAGAATCTCCTTCA                CCGGG CGG CGCGG                TTTCTGCGGCCAGTT  58 66
JLK41_RS25205 5363047 .. 5363076 + -10.7  -3.28712   GCCACCGGGTACTGC       GCGCCACGGCC AAGGAACA GGCTGTGGTGC        TTCTCGGCGAACAGC  66 454
        rpmH NONE
JLK41_RS25310 NONE
        yidD NONE
        yidC 5381156 .. 5381173 - -12.7   -4.3586   CGATGGATAGCAAAA             CGCCCCA ATCA TGGGGCG              TTTGCTTGATGCTTG 100 55
        mnmE 5379590 .. 5379601 -  -5.8  -3.91911   GTGAGGCGAAGGAAA                GCTG CAGG CAGC                 GGGCATCAGCCCGGA  62 154
        mnmG 5377200 .. 5377212 -  -4.7  -2.64616   GGGTGACCGACATCA                GGCGC TCT GCTCC                AGTTTCTGACCCGCA  43 10
        rsmG NONE
JLK41_RS25280 NONE
JLK41_RS25275 5374793 .. 5374808 -  -7.5  -2.85351   TGCGCGCAGAGTATA              GGGGG CGTATT CCCCC               CATTCAACTGTCCGG  51 88
JLK41_RS25270 NONE
        atpB 5373346 .. 5373372 -  -7.3  -2.62184   CGTTTGTTTACAGCA        GCCCTCA-TGCC CGCG GGCAGTGAGGGT         TTGTCCTGGCAGGCG  49 75
        atpE 5372993 .. 5373012 - -10.8  -3.25823   TGTCCGTCACACCAA            TTCACTCG AAGA CGAGTGAA             TTAGCCTGCGATTTG  65 26
JLK41_RS25255 NONE
JLK41_RS25250 NONE
        atpA NONE
        atpG 5369463 .. 5369479 -  -9.3  -3.54459   TGAACCGTTCTTAAA              CCGCGGC AGC GCCGCCG              ACGATTTCCGAAATC  66 4
        atpD 5368019 .. 5368047 -  -7.4  -3.92373   CAGGTTATCCACAAA       CCTGATGCGCCCG TTGC CAGGCGCATG-GG        TGATTACAGTTTCTT  65 29
JLK41_RS25230 5367498 .. 5367515 - -11.3  -5.04601   GGCAGAAATGAAAAA             GGGTAGC CTAG GCTACCC              TTTCTCTTGCAACGG 100 55
        glmU 5366028 .. 5366039 -  -5.8   -3.9163   AAAGCATAGAGGAAA                TGGC GTCA GCCA                 GGGCTCTTACTTGCA  62 57
JLK41_RS25220 5365319 .. 5365341 -    -4  -4.02762   CGAATCAAAACATAA           GGCCGTTCGC TCT GCAAGCAACC           GTCGGTCAGTTGAGG  59 31
JLK41_RS25215 NONE
        glmS 5362601 .. 5362631 - -11.8  -3.14132   TTTCTGCTGGAGGAA       CTGGGCCAGCAG GCATGAG CTGCCGGCCCGG       CGAAAGCCGTTATTC  69 35
JLK41_RS25200 5360614 .. 5360640 -   -10  -3.58269   GAAGCCATGTGCAAA         GGCATCGAGGCG GTG CGCCCGGGTGCC         CGCCTCGGCGACATA  67 388
JLK41_RS25185 5359419 .. 5359433 -  -3.4  -3.85698   TGCGCTGGCGATAAA               CTGCAC AAA GCGCTG               AGAGTACCGTAAACA  56 218
        cobW NONE
        cobN 5352917 .. 5352931 -  -2.8  -4.26076   GCAGGTTCAGGAAAA               CGGAAA CCG TTTCAG               GACCCTACGGAAACG  60 48
JLK41_RS25160 5350457 .. 5350468 -  -2.2  -2.63596   CGGCATTGTAGACCA                GAGCC CTC GGC-C                ACTGGCGTTTCACAA  38 35
JLK41_RS25155 NONE
JLK41_RS25150 NONE
        cobF 5347855 .. 5347898 - -18.2  -4.34402   TGGCGGACATGAAAA GCGATGTCCGCCCTACGC ATGACCCG GCGCAGGGCGAACAACGC CCCCTCACCTCAAGC 100 35
JLK41_RS25115 5341678 .. 5341720 - -25.1  -4.81249   CCTGAAAGCGAAAAA GGCGCCTGC-ATGCTGGTCC GTAC GGACCAGCATCGCAAGCGCC CGGATGCAGCGGATC 100 45
JLK41_RS25110 5340724 .. 5340763 -  -3.5  -3.14132   CGCCCCGCCGATGAA CCTGACGCTG-GCCG-ACA GCGG CGTGCGCCCCAGCGCCGGG  CGACTGTTTCGCCAG  45 348
JLK41_RS25100 5338921 .. 5338944 -  -5.8  -3.53012   CGCCGCTGCTGCAAA          CGGCGATGAC CTGG GCCGGCGCCG           CCTGGATCAGCTGGA  54 439
        cbiE NONE
JLK41_RS25060 5330339 .. 5330382 -  -9.5  -3.01712   GCTGCGTGCCGAACA CCTGGCGCAGCTGGCGGCACA GGAC TG-GCCGCT-GCTGCGCGTGG CGCTGCAACCGAGCG  57 345
JLK41_RS25035 NONE
JLK41_RS25030 NONE
JLK41_RS25025 NONE
JLK41_RS25020 NONE
JLK41_RS25015 5320480 .. 5320534 - -16.4  -3.84406   GCGTCAGGAGAAGAA CCCGCAGGAGCGGCGTTGGCCAGCG GCCGTT CGC-GGCTGAAGCCGCTCCTACGAG GGCTCGGCGCAGGGT  95 64
JLK41_RS25010 5318930 .. 5318957 - -12.7  -3.92869   TCACTGAGCGAGAAA        CCGCCGACACC TGTGAC GGCGTCGGCAG         AAATCCGCTTATCGC  86 129
JLK41_RS25005 NONE
JLK41_RS25000 NONE
JLK41_RS24995 5314993 .. 5315019 -  -8.7  -4.75472   CGCAGACGAACAAAA        CCCCCAC-CGGC TTGC ACCGCATGGGGG         TTTCCTTCTTTTTCA 100 85
JLK41_RS24990 5314005 .. 5314017 - -10.5  -2.80935   ACGCCATCCACTACA                GCCGC CCG GCGGC                GCCCTATGTCGACGG  59 435
JLK41_RS24975 5310123 .. 5310140 - -14.1   -4.8622   CCCGGGAACGAAAAA             GCGCGCC CGAA GGCGCGC              TTTTGGCAACGGCGA 100 50
JLK41_RS24970 5308245 .. 5308272 - -15.6  -4.16943   CGCTAGACGCGAAAA        CGCCGCGAACTT GCAA AGGTTCGCGGCG         TTTTCGTTGCTGCCG 100 83
JLK41_RS24960 5305635 .. 5305673 -  -3.7  -3.77303   GACGCAAACAGAGAA  CATCGCGGCTGAAGCCGC TCCT ACAGGT-CAGCCGCGTAG   GGTGGATAACGCGAA  54 139
JLK41_RS24940 NONE
JLK41_RS24935 5299934 .. 5299963 -  -5.7  -4.83169   ACCCGGCGAGAAAAA       GCGAATACCGCAC AGGC GCAGGATATTCGC        CGGCAGAGCGACGGC  81 44
JLK41_RS24930 5297659 .. 5297681 -  -7.6  -4.07568   GCTGCTGGTGGAAAA           GACCAGCCAC GCC GTGGCCGAGC           GCTTCGCCATCGAGC  69 278
        dksA NONE
        zigA 5292787 .. 5292803 -    -5  -2.74523   GCAGGGCGAACATCA              GGCCGC CTCCT GCTGCC              AGGGCCCGAACGGGT  43 6
JLK41_RS24890 5291802 .. 5291847 -    -6  -3.14344   GAGTTCGTCGAGCAA TGCCCGCAAGGCGCCTACGGG GTCTG CCAGAACGCGC-TCGCCGGCA ACGACCTGTACCAGC  51 318
JLK41_RS24880 NONE
JLK41_RS24875 5289510 .. 5289528 -  -6.7  -3.01924   CATCCGCCTGGAAGA            CTGGCGCC GCAA GGCG-CAG             TAAGGCAGCGCGCAG  52 124
JLK41_RS24865 5288068 .. 5288078 -  -6.8  -2.71144   CACCCTGCTCAAGTA                 CCTC GAC GAGG                 TGGCCTACGCCTGTG  48 428
JLK41_RS24855 NONE
JLK41_RS24850 5285615 .. 5285643 - -10.9  -3.54424   GGGGACGCTGCCAAA        CCGCCCCCCGGAT TGC ATCCGGGCTACGG        GCCTGCGCAACCTGG  74 290
JLK41_RS24830 5281673 .. 5281694 -  -8.7  -3.53091   ATGTCTGGCTGGAAA           GCTGAACGGC GTC GCCG-CCAGC           GCGGCGCCCACGGCT  66 110
JLK41_RS24820 5280557 .. 5280575 - -13.1  -4.77036   GCGCAGCATGAAAAA             CCCCGGG CAAGC CCCGGGG             TTTTCGTTTCGGCCC 100 137
JLK41_RS24795 5271696 .. 5271714 -    -3  -3.76224   TGGGTAGGGAGGAAA             CGCGGC TCAACCC GGCGCG             CGCTCGATCTGCGCG  52 13
JLK41_RS24790 5270442 .. 5270454 -  -5.5  -3.84901   TGGAGCAAAAACCAA                CAGAG GTA CTCCG                TGATGGCCCTTGCTC  60 486
JLK41_RS24780 NONE
JLK41_RS24775 5268882 .. 5268892 -  -2.4  -2.84098   CGTTTCAAGTAATGA                 CGTG CGA CGCG                 GGGTTTTACCGTAAA  40 47
JLK41_RS24770 5267543 .. 5267566 -  -9.4  -3.44848   GGCGTCGACGAAATA          GCCGGCCAGG CGCT CCAGGTCGGC           GGCGGCCAGCACGCC  66 306
JLK41_RS24760 NONE
JLK41_RS24755 5266227 .. 5266279 -  -5.4  -3.78934   CCGCGCCGACAACAA GGACGCCGAGGCCGTGCAGAAGCT GGTCA AGGCCCTGCACAGCGCCGAGGTCA AGCAGTTCATCGAAG  60 234
        znuA 5259182 .. 5259203 - -10.1  -4.07568   GCGCTCGCGGCAAAA           GCGCAAGCC TAGT GGTTTGCGC            CTGCGAGCGGCAACG  80 252
JLK41_RS24710 5257679 .. 5257709 -  -8.3  -2.89564   CGCTCACTTTAGACA      GGGCTCCCGGATCG ATCA CGATCCATGA-CCC       AGGCAAGGAGAGCAC  55 218
        hexR 5254699 .. 5254710 -  -5.8  -3.10344   GCGTCATCGAAGATA                CGAG ACAT CTCG                 GTACTCCCGGAACGA  49 269
JLK41_RS24690 NONE
JLK41_RS24685 5253321 .. 5253331 -  -2.4  -3.64703   TGCGCTGGACTGAAA                 TCCG TGT CGGC                 GCGGTAACCGGCGCA  49 102
JLK41_RS24610 5238674 .. 5238687 -  -3.1  -3.75766   CGGACAAGGCAACAA               CCGATC GAC GA-CGG               ACTGGGCTCGCACAT  54 117
JLK41_RS24605 5236326 .. 5236348 - -20.6  -5.07486   CACCCCGAACAAAAA           CGCCCGGGCA ACC TGCCCGGGCG           TCTTGTGTCCAGCAC 100 50
JLK41_RS24590 NONE
        oadA 5230139 .. 5230154 - -10.4  -5.40474   ACCGTGGTAAAAAAA              GGAGCC TTGC GGCTCC               CGGGTCTCGAACCCT 100 131
JLK41_RS24515 5213731 .. 5213741 -  -4.6    -3.794   GCGTAACCCAGCAAA                 CGGA GTT CCCG                 CCTCTGCCGATGCTG  57 120
JLK41_RS24500 NONE
JLK41_RS24495 5210096 .. 5210135 -  -3.5  -4.37886   GCATGGCGGACAAAA  GCGCC-CGCATGCAGA ACTGTGCTG TCGGCACGCCCGGCGC  GGGCGGCTCAGGTCA  65 33
JLK41_RS24480 5207299 .. 5207311 -  -6.3  -3.56643   GCTACACCCTGGAAA                TCGTT GCC AACGA                CGACGTCCAGGATCA  56 89
JLK41_RS24465 5204996 .. 5205014 -   -16  -3.21912   CTCTGAATGCAGGAA             GGCCGCCA GAC TGGCGGCC             TCTTGCAAGCAATGG  85 492
JLK41_RS24445 5201619 .. 5201650 - -17.4  -4.08216   CCAGGCGCCGGAAAA      CGAAAAACCGCGGC AGAG GCCGCGGTTTTTTG       TTAGCCGCCAGGCAG 100 43
JLK41_RS24435 5199297 .. 5199307 -  -2.4  -3.62572   CACGAGCATGGCAAA                 CTCC TAC GGGG                 TCATGGGGTTGTTCA  49 48
JLK41_RS24430 NONE
JLK41_RS24425 5197741 .. 5197771 -  -5.5  -4.38712   GTCATTCTGATAAAA      CGGCGAGCCCCTC GTTGACG GAGGGGCTCG--G      TTTTTCGACCCTGTG  71 133
JLK41_RS24420 5195102 .. 5195130 -   -14  -3.86897   GCCATCGGCCATAAA       CGAACAAGGCAGC CGAA GCTGCCTTGT-CG        TGGTCGGGTCGAGCC  91 43
JLK41_RS24415 5193315 .. 5193342 - -13.4  -3.28712   GCTGCTGCGCGAGAA        GCGCCGTTTCCG CGCG CAGGAACGGCGC         CTGGCGCACGCGCAC  73 207
JLK41_RS24400 5189519 .. 5189529 -  -8.2  -3.01712   CGTTGGGCTGGAACA                 GCGC GCT GCGC                 CTGCTGGTCATGCCC  55 264
JLK41_RS24390 5188187 .. 5188208 -  -9.3  -3.02144   GCAGGGGCTGGAAGA           CCGCAGCCG TGAG CGGCAGCAG            CAGCTGCGCCAACTC  57 194
JLK41_RS24340 NONE
JLK41_RS24335 5177601 .. 5177632 -  -6.4  -4.70659   CCTGATATGCAAAAA      GTTGCGCAGACTGT TCCA ACGGCCTGCGCCTC       TTCTATATAGAGAGC  78 48
JLK41_RS24330 5175421 .. 5175431 -  -3.2  -2.92389   CAACTGAGCTACAGA                 CCTA TCA CAGG                 GTCGCCGCGTTACAG  42 106
JLK41_RS24325 NONE
JLK41_RS24320 5175179 .. 5175230 -  -3.9  -4.09685   TTGTACCGGTCAAAA GACCAGAAATCAGCACTCAACAGGT CATC ACCTG--AAGCGCTCATTTCTGAAC TCTCTACGATCATGC  59 46
JLK41_RS24315 NONE
         rrf 5171818 .. 5171851 - -20.5  -3.90744   CTGCCGCGCAAAGAA     GAAACCCCAGACCTC GTTA GAGATCTGGGGTTTC      GTATAGGAGCTTGAC 100 34
JLK41_RS24305 5170929 .. 5170952 -  -2.2  -4.05446   GTGGTGAAGGAGAAA          CTGCGCAAGG ACGG CCATCCGCCG           ATCCTCACCGTCATG  58 229
JLK41_RS24265 NONE
JLK41_RS24260 5162582 .. 5162600 -  -4.5  -3.28712   CCGCTCCGCTTACAA             CGGCATC TTCAT GATGTCG             TCGAAGGCGCTGGCC  49 1
        fliF NONE
        fliG NONE
JLK41_RS24245 NONE
        fliI NONE
JLK41_RS24235 5157369 .. 5157411 -  -3.4  -4.80853   AGGCGAAAAAAATAA TCTCGCGGCGCCGCCC--GTC AGCT GACCTGGGC-GCGCCACCAGG CCTGCGCCGCCAGGC  74 0
        flgM NONE
        flgN NONE
JLK41_RS24220 NONE
        ubiA 5154796 .. 5154816 -  -8.1  -3.47573   GCAGCGATATGACAA            GCGCGCGGC AGT GCCGGGAGC            AGGGTCGCGATTTCG  62 112
        phoB 5153805 .. 5153836 -  -5.8  -3.01791   ATCCTTGTCTGAAGA      GCGAGCTCGCAGCAG CGG CTTC-ACGAGCTTGC      GAGCTGGAGCCATGC  49 223
        phoR 5152471 .. 5152488 -  -5.5  -2.78712   CGCCGAATGCAAGCA             TTCAGCG GGCG CGCTGCA              CCACCTGGGCCGGGG  46 9
JLK41_RS24200 5151054 .. 5151064 -  -2.4  -2.62184   CTGCCCTGCAGAGCA                 TCGG CGG CCGC                 TCGGTCAGTCGAGCT  38 30
JLK41_RS24190 5148126 .. 5148160 -  -4.9  -2.85999   GCACGCCAGAGCATA    GGCCATCGACACGGCG TGCG CGCCACGTCT-CAGCC     GGCCAGCATGCGCCC  45 20
JLK41_RS24185 5147754 .. 5147773 -   -15  -3.09823   GCTGCGAAAACGACA            CGACGGCC AGGC GGCCGTCG             TCGTGAATCAATGAG  80 119
JLK41_RS24180 5146442 .. 5146458 - -11.5  -3.28712   GCTGTCCTTCCAGAA              CAGCGCC CAA GGCGCCG              CAACAGCTCTGCGCT  72 145
JLK41_RS24175 5146029 .. 5146050 -  -2.3  -2.73875   TTTCTCGCAAGACTA           CAGCC-TG TCGAAAG CATGGCTG           CAATGGCGAGGACGC  39 92
JLK41_RS24170 5145532 .. 5145562 -  -8.9  -3.93369   GCAAGCCTAACCAAA      GCGCGGCGTGGCGG CCAG CCGCGA-GCCGCCC       GGTTGCCGATCAGGC  73 35
JLK41_RS24165 5144666 .. 5144723 -    -7  -2.56596   GCGGTGAGCAAGGTA CTCAGC-GCCGAAGTCGCCCTGCGC GAGCTGGCA GCGCAGTTCAACCCCAGCCACTGAG GGCGCGGGGTCACTG  49 35
JLK41_RS24145 5139079 .. 5139112 -  -5.9  -2.71144   CACGCCCGGCAACCA     GGGCCTGGCCAGCAA GCGG TTACCGGCCAACCTC      AGGCGTCCTGCAACA  46 24
JLK41_RS24140 5138246 .. 5138269 -  -7.4  -2.96216   CGCGAGCATGAGAGA          CGACCTCCTT GGCA ATGGAGGTCA           GTTTCCGGGGAGCCC  51 64
JLK41_RS24135 5137319 .. 5137342 -  -7.4  -2.50816   GGCTGATCGAGGAAG          GCATC-GGCCA GGG TGGCCTGGTGC          GCTTCCAGGTCGACG  49 299
         rph NONE
JLK41_RS24095 5130904 .. 5130920 - -11.5  -4.77157   GCAAGGCATGAAAAA              GCCGGCA TTT CGCCGGC              TTTTTACTGCGTGCT 100 44
        pyrE NONE
JLK41_RS24080 5128584 .. 5128618 - -14.2  -3.23692   CACCATGATCAGCAA     CCGCAAGCGCCCCTGA AAG CCAGCCGCGCTCGCGG     CTTGCTGATGCCCCT  78 169
        radC 5122336 .. 5122346 -  -2.4  -3.31144   GCGCTACTGCGACAA                 GGAC CTG GACC                 GGCTGATCGCCGACG  44 241
        rpmB NONE
        rpmG 5120180 .. 5120212 - -22.2  -3.91897   TGCCGCACGCAGAAA      CGAAAAAGCCCGCC GGAAG GGCGGGCTTTTTCG      ACGGAAGGCCGATCA 100 42
JLK41_RS24035 5118797 .. 5118811 -  -4.2  -2.82516   TCCGCCATCACGACA               CTCAGG ACG CCTGAT               AGAGCTCCACCGGCA  43 12
JLK41_RS24020 NONE
JLK41_RS24015 5112351 .. 5112383 -   -12  -3.01712   TTCTCTCCTGGAATA      TCCCACGCAACCTG GGCAA CAGGCTACGGGGGA      GGCAGGCCCGTCGAC  68 143
JLK41_RS24010 5110507 .. 5110526 -  -5.6  -3.02144   TGAGCCGCTCCAACA            GGCGCC-GC CGC GCAGGCGCG            CGGTACAGCGGAACA  49 197
JLK41_RS24005 NONE
JLK41_RS24000 5107277 .. 5107287 -  -4.6  -3.23216   CGCGAGGATGATCAA                 CGGA TCG CCCG                 CCTGGCCCTGGCCCA  49 217
JLK41_RS23990 5104616 .. 5104636 -  -3.8  -3.05384   TCTGGGCCCAGGCAA            GCGGGGCC ATGAG GGCACCGA            ACAGCAGTGCCATGA  43 112
JLK41_RS23985 5102535 .. 5102545 -  -8.2  -3.55761   CAGCCAGCGCTGAAA                 CGCC ACC GGCG                 CATGCCCGTGCCCGA  62 111
JLK41_RS23970 5099413 .. 5099424 -  -4.4  -2.64099   GCGCCGCATTACAAT                TTCG TAAT CGAA                 GAACTCGACGCCCCC  43 86
JLK41_RS23965 5097912 .. 5097926 -  -8.6  -3.40522   AGGCCCGCATTACAA               TCCTGA CAG TCAGGA               GCGGCAGCGCCGCTC  59 51
JLK41_RS23960 5097517 .. 5097533 - -15.1  -5.25803   AAGCGCCATAAAAAA              GCGCCCC GAA GGGGCGC              CAAAAACCATCTCTC 100 99
JLK41_RS23945 5093633 .. 5093667 -    -7  -3.43751   GAACAACCCCAAACA     GTGATCAGCGCCGGCA TCG CACCGGCCCTGGTGAC     AAGGATTCAGTACCC  58 32
JLK41_RS23940 NONE
JLK41_RS23935 5088889 .. 5088915 - -10.1  -2.52543   AGCCCGGCGAACCGA        GCGCGCCCCCGC CCTG GCAGGAGCGC-C         TGGAGCAGATGGCGC  56 278
JLK41_RS23925 5087346 .. 5087364 -    -8  -4.41616   AGTCGGCGAAAGAAA             GGCGCGGC GAG GCCGCACG             GGCGCTTCTGCGGCG  77 56
JLK41_RS23920 5085909 .. 5085945 - -10.3  -3.54424   GCCGACGGCTCGAAA   CCGGTGACCTTCGTCGC CGAGC GCGACGAAGATC-C-GG   CAACGGTGGCGCAGC  70 41
JLK41_RS23905 5082482 .. 5082497 -    -9  -3.29626   GAACAGCCAGAGCAA              CACGCT GGAG AGCGTG               TCCGGCCGCCCCTTC  61 168
JLK41_RS23890 5080134 .. 5080156 -    -4  -4.07885   CATCGGCCTGGAAAA           GGACGACCTG ATC CAGGCCCTCG           GGCTTTCGTTCAGCG  61 265
JLK41_RS23875 5078391 .. 5078417 -  -8.6  -3.07113   GACGAGCTGATCGAA         GCCGAGGTGGCC AAG GACCACGCCAGC         CTGGACAACCTCGCG  55 123
JLK41_RS23845 5073562 .. 5073578 -  -3.6  -5.19328   ACCCGAGAAGAAAAA              GGAAGC GGGCG GCTGCC              TGGCCCGGCCCCACC  84 49
JLK41_RS23840 5072400 .. 5072410 -  -2.4  -3.68351   CCTCGATCAGTGAAA                 TCCG CGA CGGC                 ACGCAGCGCGCAGCC  51 307
JLK41_RS23815 NONE
JLK41_RS23810 NONE
JLK41_RS23805 5065383 .. 5065395 -  -6.2  -3.27298   GCCGTGAACGAGCAA                GGCG TCCTG CGCC                CTCCTCGCTCGCATG  52 197
        argE 5064030 .. 5064061 -  -9.4  -3.07935   ATCGCAGCTAGGCAA      GGTTGCGCCAGCCAG AGC CTGGCTGGC-CAGCT      CGCTCAGGCGGACGG  60 95
JLK41_RS23790 NONE
JLK41_RS23785 NONE
JLK41_RS23780 NONE
JLK41_RS23775 NONE
JLK41_RS23770 5057839 .. 5057856 -  -7.7  -2.64747   CCACCTTAGCAGAAG             GCA-GGCG CAG CGCCGTGC             GCGGCCTCGCAAATG  52 59
JLK41_RS23765 NONE
JLK41_RS23760 5056735 .. 5056745 -  -8.2  -3.16564   CGCCCAGCTGACCAA                 GCCG GCC CGGC                 TGTTCGTCGACTACT  56 149
JLK41_RS23750 5055481 .. 5055493 -  -3.4  -5.02231   GAAAAATATTAAAAA                TGTC GCCGG GACA                TACGAAAAAGCTCGT  80 161
JLK41_RS23745 NONE
JLK41_RS23740 NONE
JLK41_RS23735 5051163 .. 5051185 -  -6.9  -3.67597   GCGGGTATTGAAGAA          GCTGGGCGCG CAGT CG-GCCCCGC           TGCCGCTGGGGCGGG  60 115
JLK41_RS23730 NONE
JLK41_RS23725 NONE
JLK41_RS23720 5047885 .. 5047912 - -12.6  -3.06831   GCAAGCGGCAGTGAA        CCCGGGCAGGCG CTGA CGCCCGCCCGCA         GCCCCGTTCAGCCGC  72 33
JLK41_RS23680 5037057 .. 5037077 -    -6  -3.48342   AAGCAAGGAGCATAA            GGACGGGC AGGTG GCCCAGCC            ATAACACAGATGACC  55 101
JLK41_RS23675 5036390 .. 5036404 -  -2.7  -3.34501   AGACAATGGGGACAA               CGGTC AACCG GCCCG               CACACAGGGAAACGC  44 209
JLK41_RS23670 5035630 .. 5035646 -  -2.2  -3.45031   TGGGCAAAAACTGAA             CGGCTCC GGGC AG-GCCG              CGGGAATGCTAGGCA  47 106
        chrA 5033831 .. 5033861 -  -6.2  -3.57144   GCGTTCATGTTCAAA      GCTCCACGATGCGG GACGT CCGC-TCGCG-AGC      ATTGTCGGAAGGCCG  57 171
JLK41_RS23660 NONE
        kdpA NONE
        kdpB 5029911 .. 5029937 -  -7.9  -3.85817   ATGGTTCTCCAGAAA         GTTGCCCCGGA TCAGC TCCGGGGCAGG         TCGAGCGCGGACTAC  69 37
        kdpC NONE
JLK41_RS23640 NONE
JLK41_RS23635 5025773 .. 5025814 -  -9.4  -3.06796   GCGCAGGGTAGCGAA GGCGACGA-CGCGACGCTGG ACAG CCTGC-TCGAGGCCGTCGCC CAGCGCCCACCCAGG  57 197
JLK41_RS23615 NONE
        ssuE 5021710 .. 5021749 -  -4.2  -3.53224   CAGGGTCGCGGCAAA  CA-GGGCGACCAGACTCCG ACG CAAAGTGTTGGCGCCCATG  GCGACCTCCTTTGCA  52 101
JLK41_RS23605 5020749 .. 5020788 -  -4.8  -3.53811   TGCAGTCCGGGGAAA  TCTGCGCTACCGCCCGGCT CGT ATCCGGGCGGCGG-GCCTA  GCGGGCCTGGGCCAC  52 23
        ssuD 5019339 .. 5019380 -  -5.8   -4.7373   CTACGGGATCAAAAA GCGCCCTCTCCCCAACCCT CTCCC ATGAATG-GGAGAGGGGGC TGATCGGCGCCGCTG  81 192
        ssuC NONE
        ssuB NONE
JLK41_RS23585 5017321 .. 5017345 - -14.3   -3.1154   AAGCATCAGCCAATA          GCCGGCCTC CAGACCC GAGGCCGGC          TGGGGGCACCTCACA  80 36
        cysP 5016122 .. 5016146 - -17.2  -2.70354   GGCTCTACAAATGCA          GTTGGCCGCC AAGAA GGCGGCCAAC          GAACCTGAAAATCGG  84 57
        cysT NONE
        cysW 5014184 .. 5014196 -  -6.9  -3.29144   CGAGCGCGCGGACAA                GGCGC TGT ACGCC                GCCAAGCATGGCGGG  54 262
JLK41_RS23540 5003067 .. 5003094 - -22.8  -4.82901   GTTCTTGGACAAAAA        CGAAGGCCCGCC GTTC GGCGGGCCTTCG         TGTGTAACGAACGGC 100 43
JLK41_RS23535 5001698 .. 5001733 -  -5.2  -3.13177   ATAGGGCAGACGCAA    CCGCGAGCCAGGGTGC GACA ACGACCTGGCTCGAGC     GGGTACGTGAAAAAT  48 325
JLK41_RS23530 5000246 .. 5000286 - -21.5  -2.50307   GAAAGCGCGATGAAC  CAAAAAAATGCCCGTATCC GGA AGATACGGGCATTTTCTTG  AGCGCAGCTCGGGAC 100 76
JLK41_RS23495 4993600 .. 4993643 - -10.2  -3.14132   GCCCTTCTCCAGCAA TGGCTA-CATGGCCTGGCTGC TCG GCAGCCTGGTCCTGCTGGCCA GCCTGTATCCGCTGG  62 462
JLK41_RS23460 4984329 .. 4984359 -  -7.5  -3.14683   ATACGGCGCGAGCAA      GCTGGCCGGCGAGC AGGC GGTGGCCG-CCAGC       GGCTGCGAGCACCTG  54 524
JLK41_RS23360 4961326 .. 4961382 -   -24  -3.28712   GTCGGGCGGGTACAA CCGGCAAACGAAAAAGCCCGCGCAGGTC GCA GACCGGCGCGGGCTTTT-CGTT-ACCAG GACGGGTTACTGGAA 100 32
        hisB NONE
        hisH NONE
JLK41_RS23345 NONE
        hisA NONE
        hisF 4957971 .. 4957983 -  -5.5  -3.27602   CAAGGAACATGAAGA                CTCCG TGT CGAAG                ATGTTCGACAAAGGG  52 166
JLK41_RS23330 4957189 .. 4957214 -  -2.4  -3.44229   ACTGCATCAGGATAA         CCGCCATGCC CTCCCC GGCCCAGCGA          TTACTGGCCGATTGC  47 42
JLK41_RS23325 NONE
JLK41_RS23320 4955396 .. 4955423 -   -20  -3.67775   ATCGTGATGCAAGAA        CGCCGCAGTTTC TCGC GAAACTGCGGCG         TTTTCATTGCTGCCG 100 102
JLK41_RS23300 NONE
        grxC NONE
        secB 4949710 .. 4949725 - -11.8  -5.38054   GCGGATAAAGAAAAA              GCGCCC CTGA GGGCGC               TTTTTTCATCCGAGC 100 49
JLK41_RS23280 4948470 .. 4948482 -  -6.2  -4.01158   AACCCCAGGAAACAA                GGGC TTCAC GCCC                ATGTAAGAAAACTGG  65 330
JLK41_RS23270 4944426 .. 4944457 - -12.2  -3.48924   CCACGTGGTACAGAA      GCCCGGCAGCCAGG GTCG CCTGCCCGCCGAAC       TGGCGGCGCTGCAAC  74 353
JLK41_RS23260 4942620 .. 4942633 -  -3.1  -3.61398   GTCGCCGCCGAACAA               CTG-GC CAC GCGCAG               CGATCAGCTGGCCAA  49 452
JLK41_RS23250 4941494 .. 4941525 -  -8.6  -3.12351   TCTGGGGACACTGAA      CGCCCCGGCAAGCCG CTG CGCCCCGCCAGGG-G      ACCCGCCTGGCGGCC  56 48
JLK41_RS23240 4940211 .. 4940228 - -12.7  -3.73647   CGCAGCCAGCAAGAA             GGGAGGC CTCG GCCTCCC              TTTTTCATTGCGCGC  85 59
JLK41_RS23230 4937359 .. 4937379 - -12.6  -4.35116   CACGGCATACGAAAA            CGCCCATC GTGTG GATGGGCG            TTCGGGTCAGGCGAA 100 32
JLK41_RS23225 4936514 .. 4936535 -    -8  -3.29144   CCACTGTCGCCAGAA           GTTGCACC AGCCAG GGCGCAAC            CTGCTCTCGCACTGG  59 87
JLK41_RS23220 4935510 .. 4935525 -  -2.5  -3.14522   TGAAGCCAGACTGAA              TCGGC GCTTAA GCCAA               GCTTAATCCGCCACC  43 45
JLK41_RS23215 4935053 .. 4935079 - -21.6  -4.21908   TACGACCACGGAAAA         GCCCGCCACAGC ATT GCTGCGGCGGGC         ATGCAGAACGTCACG 100 42
JLK41_RS23210 4933804 .. 4933817 -  -5.9  -3.73068   GTTCGAACTGAAGAA               GGCCA AAGA CGGCC                AGTTCTATTTCAATC  59 318
JLK41_RS23195 NONE
JLK41_RS23190 4930534 .. 4930550 - -12.3  -3.38522   GACGCATCGGAAACA              CCCGGAT TGC ATCCGGG              CTACGGCGTCGCCTG  76 26
        ilvA NONE
JLK41_RS23175 4927168 .. 4927185 -  -6.3  -3.28712   CGCCGCCGGTGACAA             GCTGGTGA TCA TCACC-GC             CACCAACCGCTTCGT  53 441
JLK41_RS23165 NONE
        ptsP 4923444 .. 4923455 -  -2.2  -3.59698   CCATGCCAGAGAGAA                GCTG CCAG CAAC                 CGCCATCGCGCGTTC  49 358
JLK41_RS23145 4919695 .. 4919716 -  -2.1  -4.64861   TGGGGGGAAAACAAA           CCCAACCGC CTGC GCGTCTGGC            AGGAGCATCGCTACG  70 296
        tagH NONE
JLK41_RS23040 NONE
        tssJ NONE
        tssK 4888308 .. 4888327 -  -5.7  -3.21099   GCTGGGCATCACGAA            CGTCCGA TCTTGC TCGGACA             GCGGGTTGAAAGAGT  50 86
JLK41_RS23025 NONE
        tssM 4883426 .. 4883456 -  -3.1  -3.61715   CAGCTTGCCGAAGAA      GCCCAGCGC-CGTC ATCC GGCACGCCCCGGGC       AGGAGAAGCTGGCCA  51 6
        tagF 4882686 .. 4882705 -  -6.4  -3.07816   TGTGGATCGAGGCAA            CGCCACCGG CAC CCG-TGGCA            GCACCTGCATCGCTT  52 176
JLK41_RS23005 NONE
JLK41_RS23000 NONE
JLK41_RS22995 4879149 .. 4879166 -  -4.1  -4.18018   CTCGTTGAGGGAAAA             GGGTAGCA AAT TGCC-CCC             GCCTGCGGGCCTGCC  62 41
JLK41_RS22990 4878029 .. 4878047 - -12.4  -3.12351   CCGCTGCAGACCGAA             CCCCAGGC GAC GCCTGAGG             TGCCGCCTCAGAGTT  69 33
JLK41_RS22965 4872871 .. 4872881 -  -6.8  -4.67353   TCAGTCATCGAAAAA                 CCTG CAT CAGG                 GTGCACGAAAGAGGT  78 113
JLK41_RS22960 4871782 .. 4871797 -    -4  -3.78934   CCTGCTGGAGAAGAA              GGACTTC CCC GAAG-CC              GAGTTCAGCCTGTAC  57 444
JLK41_RS22850 4847691 .. 4847740 - -17.9  -3.39803   GAGCGACAGGCAGAA CGGTAGCGCGCCACGGCGAGCGG CGCTGC CCGCCCGCCATGGCGCGC--CTG GCTACATCACCGCCA  95 27
        mutM NONE
JLK41_RS22840 NONE
JLK41_RS22835 4845700 .. 4845733 - -29.7  -3.89215   GTGTACAAACGCAAA     CGGCCCCTCGCCTCG AAAC CGAGGCGAGGGGCCG      CGTACAGGAGCCTAA 100 47
JLK41_RS22830 4843786 .. 4843821 - -20.4  -3.06183   GCCAGCGCGACTGAA    GCCCCTCGCACGGAGC CCAT GCGCTGTGCGAGGGGC     GGGCCGCTACGAGAG  95 32
JLK41_RS22795 4835774 .. 4835786 -  -5.5  -3.65046   CGCCTACGTGAACAA                CAAGC AGC GCCTG                TTCGCCGAGCAGGGC  57 477
        ftsY NONE
        ftsE NONE
        ftsX 4828278 .. 4828302 -  -2.7  -3.76224   CTCCGATTCACGAAA          CTCGTGCAGTG TAG CACTGCGCTAT          CTGATGCAGGGCCTG  52 122
        rpoH 4827363 .. 4827380 - -12.7  -5.28176   TCCAGGCAGAAAAAA             GCCGCAC CCAG GTGCGGC              TTCTCGTTGGCTCGA 100 46
JLK41_RS22750 4826295 .. 4826317 -    -9  -3.57783   GCAGCACAACCAGAA           TGGCGGCTCG TTG CGCGGCGCCA           GCACGCTGAGTCAGC  64 439
JLK41_RS22740 4825294 .. 4825318 - -10.7  -3.12668   GCCGAAACGGCAACA          GACCCTGCCAT CTG ACGCCAGGGTC          AGGTCATTTTCCAGG  65 24
        thiS NONE
JLK41_RS22730 4823793 .. 4823809 -  -4.3  -3.19522   CGACGGAACAGGCAA              GGAACGC TCG GCGTCGC              GGACGACGGTGCCGA  48 149
        trmB 4822875 .. 4822901 -  -2.1  -3.01712   GCGGCGTCGCCAATA         CCTGCACGCCC TCTGT GAGCGTGCTTA         TCGTTGTTGTGTTCT  41 120
JLK41_RS22720 4821218 .. 4821230 - -10.5  -3.01791   ACTGGTGCTGGAACA                GGGCG GCA CGCCC                CTGGCCTTTGCATCC  60 285
JLK41_RS22655 NONE
JLK41_RS22650 4809302 .. 4809320 -   -16  -3.39895   GCCCGGATGAACGAA             GGGGACGC CTT GCGTCCCC             TCTCAGGCATCAGCG  82 35
JLK41_RS22635 4806605 .. 4806624 - -13.6   -5.1675   CGAGTCACGAAAAAA            GGGCATCC CACA GGATGCCC             TTTTCATTTCCCCGG 100 124
        thiI NONE
        typA 4797324 .. 4797361 - -21.5  -3.54653   ATGGGCACCACACAA   TGAAAAACCCCGCCAGA TCGC TCTGGCGGGGCTTCTCA    TTTCAGCCTGGGGAG 100 43
        gbcB 4794441 .. 4794477 - -10.8  -3.29144   GCATCCGGGCTACAA    GGGGGCGTAGCGATCA GTAAT CGATCGCCACGTCGCC    CTTCGGCACGCTGCA  68 2
JLK41_RS22580 4792731 .. 4792774 -  -7.2  -4.07568   GCTGTCTGTGGAAAA CCGGCGCCAG-GCCAGAGCCG ATG CGGCTCCGGCGCAAGCGTGTG CTATTTGCTCAATGC  68 44
JLK41_RS22575 4790859 .. 4790871 -  -3.3  -2.93435   CGAATTACCGATACA                CCGGA TAA TCCGC                GCACAGTGCGGCCAC  42 2
JLK41_RS22570 NONE
JLK41_RS22565 NONE
JLK41_RS22560 NONE
JLK41_RS22555 4785235 .. 4785288 -  -6.3  -2.94099   CCCGTTCATGAGAGA GGGGTCGGGGAGAGGGCTATCCGAG TCAA CGCGGTCTGCCCTTCCCGCCTCCCC AGAGGGAGCCGTTGG  48 44
        purU 4784185 .. 4784204 -  -9.2  -2.68823   TTTTGTGGATACAAG            GCGCGACC GAAG GGCCACGC             GGCCTTGCACTGGAG  56 137
        fdhA 4782897 .. 4782914 - -12.7  -5.37593   TTGCAAAGGAAAAAA             GGGAGCC CGCA GGCTCCC              GAAAAAGGCGCGGAC 100 64
JLK41_RS22505 4773380 .. 4773403 -  -9.5  -2.64616   CCTGCATCCAGATGA          GCGCGGCAG CAGCGC CTGCCGGGC           CTTGCTGCAAGCACT  54 386
JLK41_RS22495 4772027 .. 4772052 -  -4.5  -2.96517   AGGTAGCAAGAAGCA         GGCCTGGCGCC CCTT GGCGCGAGGAA          GTCGTTACAGGGCAC  45 98
JLK41_RS22490 4769893 .. 4769923 - -16.1  -3.19003   AGAACAGGCGAGGAA      CGG-GCCGGGCTGG CGCT CCGGCCCGGCTCCG       GCGCCGCCTCAGTCG  85 34
JLK41_RS22485 4769229 .. 4769244 -    -6  -2.79796   TTCGACGGCAGGAGA              CTGCCG AGGG CGGCGG               CGGGCGTCAAGCGCA  46 121
        creB 4768509 .. 4768522 -  -5.2  -3.78022   GGCAGATCGAGGAAA               GGCG CTAGGC CGCC                GGCTCGAAACTGTAG  57 16
        creC 4766905 .. 4766915 -  -5.4   -4.1899   TGAGCGCAGCGAAAA                 TTGG AAA CCAA                 CAGATGATGGGGTTC  68 58
JLK41_RS22445 4760090 .. 4760110 - -11.1  -4.32857   TGTGGGAAACAGAAA            GGGCGCC GGTCGAG GGCGCCC            TTGCTAACGGCTGTG  93 77
        creD 4758611 .. 4758632 - -15.1  -2.69471   TCACCTCCAGAGAAG           CGGCGCGGC CACT GCCGCGCCA            TATGATTCAGGCTTG  77 32
JLK41_RS22435 4758223 .. 4758256 -  -2.3  -3.36515   GGGCATCGCGAAACA     GCCAGGCGATGCGTCG TGC CAGCAGAT-GCCCGGC     ACGCGCCTCCTCACG  44 58
JLK41_RS22430 4757328 .. 4757348 -  -5.3  -4.07568   CGCTGTTTTGCAAAA            CCTCGCGCA GAT CGTGCGAGA            GTGGGGTGGCCGCTC  65 39
JLK41_RS22425 NONE
JLK41_RS22420 4755082 .. 4755105 - -18.2  -5.00616   CTGTTCCCGAAAAAA          GACGGGCCTC CGTG GAGGCCCGTC           TGTCAGACCCTGGAC 100 73
JLK41_RS22415 4754416 .. 4754430 -  -3.4  -4.11751   AGCAATTCGGGAAAA               CGGGGC ATG ACCGCG               CGCTCGAAAAATCAG  59 151
        yegQ 4752826 .. 4752836 -  -4.6  -3.14344   GATGCTGTTCAGCAA                 GGCA CGC CGCC                 AGGGCATCGACAGCC  47 305
JLK41_RS22395 4747963 .. 4747978 - -11.8   -5.1675   GCAGGTATGAAAAAA              CCGCCC CTCG GGGCGG               TTTTTTATTGGACGG 100 81
JLK41_RS22385 4744908 .. 4744918 -  -5.4  -2.74523   TCACCGTCAATACCA                 GATG ATC CATC                 TACTGCCCCTCTCTC  46 58
JLK41_RS22380 4744327 .. 4744356 - -16.4  -4.53034   GCCAGATAACGAAAA       GCCCCGGCGCAC TAGGTG GTGCGTCGGGGC        TCCCCAGTTTATCCA 100 68
        bioB 4738603 .. 4738631 -  -6.7  -2.59881   CAGGCACCGGAGAAC        GGTGGATAACC GCAAGCG GGTCAGCCACC        CTGCGCATGACCTCG  49 86
        bioF NONE
JLK41_RS22340 NONE
        bioC NONE
        bioD NONE
JLK41_RS22325 NONE
JLK41_RS22320 4733856 .. 4733871 -  -6.2  -3.33696   CTGCGGCCGAAGCAA              TCAAAC AGGC GTTTGA               AACATACGTTTACGC  52 73
JLK41_RS22315 4731896 .. 4731927 -   -26  -4.60487   TACGACGCGCAAAAA      CGCAAACGCCGCCC CGAA GGGCGGCGTTTGCG       ATCAACCGTGACGGA 100 42
JLK41_RS22310 4730503 .. 4730517 -    -7  -3.29043   AATGCGCCGCCATAA               GCCGGC TCA GTCGGC               CGGGGCGCTGACCTT  56 17
JLK41_RS22305 4728576 .. 4728595 - -16.4  -4.58773   TCCATGAAATGAAAA            GGCCCGCC AGAA GGCGGGCC             GAATTGCCTCGACCA 100 45
JLK41_RS22300 4726632 .. 4726651 - -12.1  -4.98531   CGCTGAAATGAAAAA            CCCCGGC ACAGGG GCCGGGG             CTCATCCACCACGCA 100 48
JLK41_RS22290 NONE
JLK41_RS22285 NONE
JLK41_RS22280 NONE
        hutU NONE
        hutH 4719015 .. 4719031 -  -4.3  -2.56596   GCCTGGATCAACCCA              CGGAAGG CAG CATCCCG              GCCGGCAGCAGGGGC  43 1
        hutC 4717874 .. 4717886 -  -7.7   -3.7732   CTGCGACATGAAGAA                CAGCT TCC AGCTG                GTCGAGCCGCGCGAC  66 307
JLK41_RS22240 4713753 .. 4713791 -  -3.8  -2.50816   CGTTCACCCATCAAC  TGCAGGCG-CGCCATGC TGTCAC GCATAACGACGCCCACC   CTCGGCCACCACACC  40 5
JLK41_RS22235 NONE
JLK41_RS22230 4711882 .. 4711908 -  -6.5  -4.78237   GACGGCAGAAGAAAA         CACGCCCCG GCGGTAGAA CGGGGCGTC         GCGACAGACTCGCAA  85 49
JLK41_RS22215 NONE
        speB 4707715 .. 4707741 -  -6.4  -3.53811   TTCAGCGCCGGCAAA         CAGGACATCCGC ATC GAGGATGGCCAG         CTGCGCATCGTCGAG  56 412
        dctP NONE
JLK41_RS22185 4700837 .. 4700857 -  -5.4  -2.94695   TGAGGATCAACCAGA            GATCAGGG CTCAT CGCTGATC            CTCCCGCGCAAACGA  48 7
JLK41_RS22180 4699538 .. 4699551 -  -5.9  -2.90392   CATCTGCCAACTATA               GACGC TGTC GCGCC                TTTTACACCGCGTAA  48 28
JLK41_RS22175 4698258 .. 4698295 -  -9.1  -3.64703   GCGCTGCCAGGCAAA   CACCCGGGCACTAGTAC AACT GCACTAGTGCCGGCCTG    CCCCTGCCTGGAATC  68 100
JLK41_RS22170 4696469 .. 4696486 -  -5.5  -3.90729   AACAACGTCGAGAAA             CTGGCCG GCGC CAACCAG              CAACCCTGCGTAGCG  63 82
JLK41_RS22160 4694150 .. 4694166 - -10.1  -3.02144   CCACCTGCTGGAACA              GCTGACG CCG CGCCAGC              AGGATGTGTTGCGCC  60 199
JLK41_RS22150 4692929 .. 4692939 -  -4.6  -3.29144   GGAGCGCGCCTACAA                 CGAC CAT GCCG                 GGGTCACCGCGCTGT  49 480
        tssI NONE
JLK41_RS22105 NONE
JLK41_RS22100 4675804 .. 4675817 -  -9.5  -3.00498   CAGAGGCCAGATACA               GGCCG AGAA CGGCC                AATAGCGGTCATCAG  60 345
JLK41_RS22075 4672246 .. 4672256 -  -2.4  -4.64766   GGTAGACCTGAAAAA                 GCGC GTG GTGC                 GGCTCGCAGATACCA  70 520
        tsaD 4661498 .. 4661526 -  -5.3  -3.61398   GGTGGCCGGCAAGAA       GCTCGCCG-TCA TGACCC TGATCGGCGACC        TGCTCAAGGGCCTGC  54 463
        folB NONE
        folK 4660267 .. 4660312 - -12.5   -3.4489   AAGGCCTACAAGGAA CGCGAGCAAGCCTAGCCCGGAT GCA ATCCGGGGC-GGCATGCGCGCA GGTCGCGGATTCCAC  79 112
JLK41_RS21960 NONE
JLK41_RS21955 NONE
JLK41_RS21950 4642889 .. 4642947 - -10.1  -3.17051   CGTGCAGGACGAACA GCTGTACCGCCGCCTGCGCGGCTG-GCTG CAA CTGCACATCCGTGCCAGCGGCGGCT-AGC GCAGGTCCCGGCGCT  65 21
JLK41_RS21940 NONE
JLK41_RS21935 4638767 .. 4638794 -  -5.6  -3.57144   GCGTCGATCTCGAAA        CGGTGGATGA AAAGAGCG TCATCCACCC         TGCTCCGGCACCGCT  57 47
JLK41_RS21930 NONE
JLK41_RS21925 4636279 .. 4636306 -   -14  -2.66969   CAGGAAGAGAATTCA        GACGGCCCCGCC AGCG GGCGGGGCCGGA         TAGGCGACTTAACGC  72 34
JLK41_RS21920 4634923 .. 4634972 -  -4.2  -3.48276   GCGGTGCCGACACAA GCACCCTCTCCCGCCCTTCGGGCA CCCT CGCCC-ATGAATGGGCGAGGGT-C ATCGGATGGCCTGCT  52 54
JLK41_RS21915 4633962 .. 4634003 -  -5.1  -2.71731   CGCATTCGCTAATGA TGA-CTCAGGCATGCGGCCC CTT GCGCCGCACGGGTGAACTCA CTCCACTTGCTGGGT  43 23
JLK41_RS21910 NONE
JLK41_RS21905 4631374 .. 4631430 -  -5.3  -2.52464   GTGTTTTTCAAGGCA GCATTGATCGGAAAACCAATCAAAAAG CTG CCTTACGATCCATTTTCCAATCAACCC TGTTCCCAGCGCTTC  45 19
JLK41_RS21900 NONE
JLK41_RS21895 4628642 .. 4628658 -  -2.1  -2.85896   GTTAGGAAGGAATCA              CTCGGCC GGT GGCAGAT              CCTTGGTGAAGGTCT  40 6
        gabD 4627036 .. 4627062 -  -5.1  -2.64354   CCAGATAGTCACAAG        CACTGCA-CGCC GGGA GGCGCTTCAGCG         GCGAGCGCTGGACGT  43 92
         rpe NONE
JLK41_RS21880 4625299 .. 4625326 -  -5.4  -5.14965   AGCGGCAGGAAAAAA        TCAGGCGCGCCA GCGC CAGCGGGCCAGA         GCCTTGATGACTTTC  85 283
JLK41_RS21870 NONE
JLK41_RS21865 NONE
        trpD NONE
        trpC 4621221 .. 4621237 - -13.7  -5.28481   CACGCAATGAAAAAA              GCCGGCT CTG AGCCGGC              TTTTTTCATTGCGTC 100 41
JLK41_RS21845 4619854 .. 4619877 - -19.6  -3.35813   CCGCATCTGAATGAA          CGAGGGCGCC CATG GGCGCCCTCG           TCGTATCACGCGAAC  95 46
JLK41_RS21830 4616553 .. 4616563 -  -8.2  -3.28712   GCGCGCCCTGCAGAA                 GGGC CGC GCCC                 TGATCATTCCCGGCT  58 160
JLK41_RS21800 4610928 .. 4610967 -  -7.8  -3.23692   GAGCACCAGCAGCAA  CAGCGACCAACGACGGCGA CGA TCACGG-CGCGGATCGCTG  AGGCGAACTTCCCAA  57 48
JLK41_RS21795 NONE
JLK41_RS21790 NONE
        erpA 4609386 .. 4609406 - -15.4   -4.4078   CCGCCTGAACGAAAA            CGCCGCGC ATCGA GCGCGGCG            TTTTTCATCTGGCAA 100 46
JLK41_RS21770 4604977 .. 4604994 -  -2.6  -4.46233   GCAATCGCAAATAAA             CTCTCG AATTCA CGAGTG              TTACTTGTGATGCTG  66 506
JLK41_RS21765 4603294 .. 4603304 -  -3.2  -2.92389   CAACTGAGCTACAGA                 CCTA TCA CAGG                 GTCGCCGCGTTACAG  42 106
JLK41_RS21760 NONE
JLK41_RS21755 4603052 .. 4603103 -  -3.9  -4.09685   TTGTACCGGTCAAAA GACCAGAAATCAGCACTCAACAGGT CATC ACCTG--AAGCGCTCATTTCTGAAC TCTCTACGATCATGC  59 46
JLK41_RS21750 NONE
         rrf 4599691 .. 4599724 - -20.5  -3.90744   CTGCCGCGCAAAGAA     GAAACCCCAGACCTC GTTA GAGATCTGGGGTTTC      GTATAGGAGCTTGAC 100 34
        birA NONE
JLK41_RS21735 NONE
JLK41_RS21730 4596812 .. 4596836 -  -2.1  -2.64274   ACCCCTCCAAAGTGA          GGCGGCA TTTTCTAGATC TGCCACC          CTGCTGTCAAGCTTT  38 135
JLK41_RS21725 4596689 .. 4596705 -  -2.1  -2.76263   TCTACCACTGAACTA              TGCCCGC GGA GCCTGCA              GCTCACGCTGAATCT  39 40
JLK41_RS21720 NONE
JLK41_RS21715 4596489 .. 4596510 -  -9.5  -4.72007   TGCCATTAAAACAAA           GGCAGATAC TTTC ATATCTGCC            TTCATTAGATGGAGC  85 35
         tuf 4595198 .. 4595223 -  -8.2  -4.56914   TGACCTAAAGCAAAA         TCAGGCCGAC CATTAT GCCGGCCTGG          GAGGAACAGATCAAC  79 44
JLK41_RS21705 4595090 .. 4595121 -  -3.6  -3.55548   GAAGATCCTGTGAAA      GACACGCCAGATTC GTTA GAAAATGGCAGGTC       AGGAGGGAATCGAAC  49 17
        secE NONE
        nusG 4594117 .. 4594139 - -20.6   -4.4767   CCAGTGACGACAAAA           CCCCGCAGCC TAA GGCTGCGGGG           TGTGGGATGCTTATG 100 45
        rplK NONE
        rplA 4592882 .. 4592904 - -16.3  -3.55622   CCCAATTTTTTCAAA           GCCGGCAGC ACAAG GCTGCCGGC           TCAATCACTTACGCG  93 34
        rplJ NONE
        rplL 4591677 .. 4591700 -   -16  -4.78149   CCTAGAACGGAAAAA          GGCCGGTGGC AAAA GCCACCAGCC           ATCAGCCTTGTGCGA 100 72
        rpoB NONE
        rpoC 4583161 .. 4583184 - -12.4  -3.76952   CCCAGTCAAGGCAAA          GCCCCGCCAG CGAA CTGACAGGGC           TTCGACTCAATTTCC  85 32
        rpsL 4582660 .. 4582692 -  -3.3  -5.38326   TCAACTAAATAAAAA      GGATCAAGCGGCC TTATTTC GGACGCTTGGTAC      CGTACTTGGAACGAC  85 6
        rpsG 4582072 .. 4582082 -  -3.2  -2.95896   TTACGAGCCATAAAG                 CCCT CGC AAGG                 TTAGTGGAGCCGGAA  42 41
        fusA 4579899 .. 4579913 -  -2.1   -3.8647   AGCCACGACAGTAAA               CCTCT TACTT AAAGG               GCGGGATTAGCCTTG  54 32
         tuf 4578652 .. 4578677 - -15.5  -4.17023   TTAACCAGTTCAAAA         GAAAAGGGCCC CGAA GGGCCCCTTTC          TTTCAAGCGGATCGT 100 44
        rpsJ 4578213 .. 4578232 -  -9.4  -2.63301   CAGAGCGTTACACGA            CTAAAACC GCCA GGTTTTAG             CCGAGGCTGATCTGC  56 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 4571901 .. 4571929 - -12.4  -4.63218   GCTTGTTCAATAAAA        GGCAAAGCCGGC ACAAG GCCGGCTCTGCT        TTCAGCTACCGCTGA 100 41
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 4567801 .. 4567838 - -12.8  -4.85782   CGCTGTAAAAACAAA   TAATCAACCCGGCAGC GCACTA GCTGCCGGGCTTATCA    CGCGTGGTTCACACT 100 40
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 4564813 .. 4564829 - -10.8  -5.49234   ACAGGCAACAAAAAA              CCGGGC ACTAG GCCCGG              TTTCTCGTACAGCAA 100 46
        katG 4562376 .. 4562406 - -13.3   -4.4078   TTCGGTCAAGCAAAA       GCACAACGCCTCC ACGGG GGAGGCGTTGCGG       TCTACTGACGCACGG 100 58
         bfr 4561785 .. 4561804 - -13.6  -5.76949   GAGCGGCAAAAAAAA            GCCAGAGC ATTA GCTCTGGC             TTTTTCTTGTGGCTT 100 60
JLK41_RS21485 NONE
JLK41_RS21480 NONE
JLK41_RS21475 NONE
JLK41_RS21470 4555000 .. 4555027 - -18.6  -4.08692   TAACCCCGGGCAAAA        GAAAAAGCCGGC TTTC GCCGGCTTTTTC         TTTTCCTCCTGCTCA 100 38
JLK41_RS21460 4553325 .. 4553341 -  -2.9  -3.31792   CCAGTACGGCTACAA              CACGACG ACT CATTGTG              CGGCCTCCTCGGCCA  44 18
JLK41_RS21455 4551991 .. 4552003 -  -5.5  -2.76093   AAGGCGAACAGATCA                GTCAC GGC GCGAC                GCTCCCGACAGGTGC  46 10
JLK41_RS21450 NONE
JLK41_RS21445 NONE
JLK41_RS21440 NONE
JLK41_RS21435 4549204 .. 4549222 -   -11  -4.84527   CCCAGACATGAAAAA             GCCAGACA TCA CGTCTGGC             TTTTTCATGTCCGTC 100 45
JLK41_RS21410 4545122 .. 4545171 -  -7.7  -3.23216   GCGGAGGATGACGAA GCGGTGTACCAGCTGGCGGTGCAG CAA CTGGCCCGCCAGC-AGTACGAGGC CGCGCTGGACGCCCT  56 252
        nrdR 4542724 .. 4542743 -  -6.4  -3.13403   CCCGCGCCATGAACA            GATGATCG CGCT CGCTCATC             AGCTTTTCGACGGCT  54 24
        ribD 4541514 .. 4541525 -  -7.2  -3.47322   TTTTACCATAACGAA                GCCG CTGC CGGC                 TACAGAGCGCCCGCT  58 124
JLK41_RS21380 NONE
        ribB 4539206 .. 4539226 - -10.4  -2.61322   ACATGGGTTAAAGAG            CCGGAGCG TCGTG CGCTCCGA            AAACGAATTCGTTGA  60 238
        ribE NONE
        nusB 4538178 .. 4538199 -  -4.3  -2.53382   ATCAGCTCGAACTCA           CCCACAGTG CATT CCCCATGGG            CGCGCCCGAGCCACT  42 54
        thiL NONE
JLK41_RS21355 NONE
JLK41_RS21350 NONE
JLK41_RS21345 NONE
        ribA NONE
JLK41_RS21335 NONE
JLK41_RS21330 4533281 .. 4533308 - -10.6  -3.14602   CCCACGCCAGCAACA        TCCACAGGC-GGC CAA GCCTGCCTGCGAA        AGCACTGCACGTCCC  65 47
JLK41_RS21290 4520994 .. 4521028 - -12.1  -3.14132   GTGGCCGGCGACGAA     GTGCTGCGCCAGGTC GGCGA GACCCTGCGCAGCAG     TTGCACTCGCGCCAG  69 343
JLK41_RS21240 4509308 .. 4509318 -  -2.4  -4.57341   AAGTTTCTCGAAAAA                 CGCC TGC GCCG                 CAAGGAGTCGGTGAT  67 354
         mpl NONE
        ubiX NONE
JLK41_RS21205 4503428 .. 4503450 -  -6.3  -3.14132   CTGGCCTTCGATGAA          GT-GCTGCCGG CGG CCGGC-GCTAC          CCACAGCGCGGTGCG  51 129
JLK41_RS21170 4493259 .. 4493294 - -12.5  -3.28712   CGCTCGCGGCTAGAA    GCCCCTCCCACAGCG TGCAGG CTTCGTGGGAGGGGC     CCTAGCCGCGACTGT  76 27
JLK41_RS21165 4492096 .. 4492129 -  -8.1  -3.04792   TGAGCACCTGGAAGA     TTCGCCACCGGTGAT CATG ATCACCAGCCGCGAC      AGCGAGCAGGACGTG  53 478
JLK41_RS21155 4491436 .. 4491452 - -10.9  -3.53343   AACCGTCCCTGGAAA              GGGTCTT CAG AAGACCC              AGCGCGGCCTCACCA  74 15
        aqpZ NONE
JLK41_RS21145 NONE
JLK41_RS21140 NONE
JLK41_RS21135 4486499 .. 4486518 -   -10  -2.88544   CTGGACCGTGACATA            CCGGCGCTG ATC CAG-GCCGG            TGGTTTTCACATCCG  59 115
JLK41_RS21105 NONE
JLK41_RS21100 NONE
JLK41_RS21095 NONE
JLK41_RS21080 4477383 .. 4477405 -  -6.3  -3.33261   GCTGAACCTGGAGAA          GCGCTGCGAGC CGC GC-CGCA-CGC          CACGCCAGCAGCACG  53 331
JLK41_RS21070 NONE
        nadD 4474214 .. 4474234 -  -6.8  -2.52464   GCCTCGTGTAATGGA           CGCCTGCGC AGGT GCAC-GGCG            TATCAAGCATGCGGC  48 28
        rsfS NONE
        rlmH NONE
        mrdA 4471386 .. 4471404 -  -6.7  -3.14344   CAGGCGCTGCAGCAA            GCTGGCGC GCCG GCGC-AGC             ACGTCCTCGTCGGAA  54 56
        rodA NONE
        mltB NONE
JLK41_RS21035 4468136 .. 4468149 -  -9.5  -3.36515   GTGGATTGTGAAACA               GCCCC CGAA GGGGC                CTTTCCCCGGCCGCC  63 141
JLK41_RS21030 4466896 .. 4466917 - -12.9  -4.36914   GGCCCGTCCAGAAAA           GGGCCGCCC ATGG GGGCGGCCG            GAGCTATCAGTTGAA 100 32
JLK41_RS21025 4466593 .. 4466606 -  -4.5  -2.63715   ATGGAGGTCAGAGCA               CCATG TGCA CACGG                CCGGTCGCACGCAGA  43 4
        lipB 4465914 .. 4465943 - -19.5  -3.84825   GCGATCCACACGAAA       GAAAAAGGGACGC CGCG GCGTCCCTTTTTC        ATGCCTGGCCGAGCG 100 41
JLK41_RS20985 4458060 .. 4458093 -  -3.8  -3.08464   TGAGGATGTAGCGAA     TCGGCATCAGGCACC TCCGG GGCGCCCAA-GCCTA     GCAGGTCACTGAGAT  43 87
JLK41_RS20980 4457001 .. 4457011 -  -4.6  -3.71848   CCGCGCCACCAACAA                 CGGC ATG ACCG                 TGGTGATCGACCCGC  55 310
JLK41_RS20950 4451214 .. 4451230 -  -2.1  -3.86346   CCACTGCCCTAGAAA              CGCAGCC GCA AGCGGCA              AGTCTCAGGTAACAG  54 93
JLK41_RS20920 4445802 .. 4445816 -  -5.6   -2.5092   GAACAGGGGATGAAG               GTCGGG CAT CGCGAC               GAATCCGGGCGACAT  45 109
JLK41_RS20915 4444951 .. 4444982 -  -5.1  -3.31792   CGAGCAGTGTCAGAA      CGTGGCGTGCCG GCGCCGAAA CTGC-CGCCACG      TTCAGGCCACCACGG  49 27
        fhuB 4442998 .. 4443013 -  -3.9  -2.78073   AGCAGGCCGAACAAC              CCGGC TCTCAT GCCAG               CCTCCCGCGAATCAG  41 17
JLK41_RS20905 4441997 .. 4442009 -  -5.5  -2.64298   CGAGGAAAAAACGAG                GCTCA TGA CGAGC                GCGAGCAGCCGGGAC  46 155
JLK41_RS20900 4439544 .. 4439557 -  -9.5  -3.16785   GAGGAGAGGAACAGA               GCGGG AGCA CCCGC                CTCACCAGGCGGCGC  61 83
JLK41_RS20895 NONE
JLK41_RS20890 4437076 .. 4437100 -  -2.9  -5.00616   TGTTGCGCCAAAAAA         CAGCGCATCA GGCGAT CGATGC-CTG          AACCTCAGGCCAGGT  75 30
JLK41_RS20885 4436078 .. 4436098 - -11.1  -3.20573   TCACCGAGAGCAATA            GCGGCCAGA TGA TCTGGCAGC            GCCGCCGCTGATCAG  69 46
         amn 4433723 .. 4433760 -  -3.1  -3.76125   TCAGTCTAAGGCAAA   GCGCGATGCGGCGTCGC CACT GCGTGGCCGGACTGTGC    GCCAGGCCACGCAGG  54 47
JLK41_RS20870 4432871 .. 4432888 -  -6.9  -2.62983   CGCAGCCTGAGATCA             GAGCTGC GCCA GCGGCTC              GACCGGCTGGCGCGC  49 5
JLK41_RS20860 4429986 .. 4430015 -   -15  -2.62396   CAGCCGGTGACAGCA       CGGGCGCAGAGC TGGCAT GCTCTGCGCCCT        GTTTTTCCGTGAGCG  76 483
JLK41_RS20845 4427905 .. 4427915 -  -6.8  -3.30441   CATGACCGCGCAGAA                 GCAG CTG CTGC                 GCCAGGGCATCCTCA  54 315
        hrpB 4420847 .. 4420858 -  -7.2  -3.36327   CGATGCGACGCACAA                GCCG GGTG CGGC                 CATAGAACTGAGTGT  56 419
        dsbD NONE
JLK41_RS20790 NONE
        dsbG 4415353 .. 4415379 -  -5.1  -3.01712   CCTGCCCCGCGAATA        CCTGC-TGC-GCC CCT GGCCGCACGCTGG        TGCCACCGGCGCGCA  47 430
JLK41_RS20765 4409462 .. 4409484 -  -2.6  -2.64099   CCGGTGGACGAGAAC           GCGTTGTCCA CCC TGAAACACGC           AGCGCTCAGAAATGG  38 31
JLK41_RS20760 4407408 .. 4407442 - -12.1  -3.09785   TCACATTTCAAGACA     CTGGCGTTACACCGG GATGA CAGGCGTGACGCCAG     CCGTCTCATTCCAGG  72 31
        tolQ NONE
        tolR NONE
JLK41_RS20745 4405306 .. 4405317 -  -2.2  -3.30124   GCGGATGCCGTACAA                CTGCG CGA CGC-G                CTCGACCATGCCTAC  44 95
JLK41_RS20730 NONE
JLK41_RS20725 4401490 .. 4401519 -  -8.5  -3.14132   GGTGGTCGCGACGAA       GGC-CAGCCCGGGC CAC GCCCGGACTATGGC       GAGCCGTACTACGGT  56 149
JLK41_RS20705 NONE
JLK41_RS20700 4398498 .. 4398537 -  -6.4  -4.72272   CTCCGCCATGAAAAA GCTCGCCG-CTGCAGCGC CCAGCC GCGCCGCAGGCAGTG-GC  AAGGGTGTCCGTTCG  78 217
JLK41_RS20695 4396569 .. 4396591 - -10.4  -2.57344   CAGCCCGGGTAGAAT           GCAGCCGGGC CTG GCCCGCCAGC           GGCGCACAGGCTTCG  60 499
JLK41_RS20670 4392337 .. 4392367 -  -8.2  -2.86432   TGCAAGAGCACGACA       GTGTGCCCTGGGAG GCG CTGCCAGGGCAGAT       GGTGCGCGGCGCCGA  54 139
JLK41_RS20650 NONE
JLK41_RS20645 4386783 .. 4386799 -  -2.9  -3.01712   CCTGCGTTGGCAATA              CGGCGTT GAA AACACCC              AGAAAATGCTCGTTC  41 95
        tesB NONE
JLK41_RS20635 4384862 .. 4384875 -  -3.8  -3.99324   GCGCAGTACGAGAAA               GCCA TCCAGG TGGC                CTTCCAGGAGGTCGC  59 393
JLK41_RS20615 4378293 .. 4378323 -  -7.6  -3.50572   AGCGACGCCAGACAA      CCGCCCCGGTGCGC CTGGT GCG-ACCGGG-CAG      CGGTTATTCAGCCGG  62 322
JLK41_RS20595 4375894 .. 4375919 -  -7.5  -2.79796   CGGGAGTCTAGCAGA         GGCCAC-CGCGA CTA TCGCGCGCGTCC         TCAACACGCTTGCCA  50 26
JLK41_RS20590 4375376 .. 4375386 -  -4.6  -3.68359   TCCTGAAAACCAGAA                 CGAC AGC GCCG                 GCCAGACAAGGCCGC  54 69
JLK41_RS20585 NONE
JLK41_RS20580 NONE
JLK41_RS20575 NONE
JLK41_RS20570 4370713 .. 4370727 -  -7.1  -3.01712   GTCGGTTTGCGAAGA               GACCC GGCAA GGGTC               TCGATAGCCAATGGA  52 46
JLK41_RS20565 4368512 .. 4368570 - -10.3  -4.37886   TTAGCGCGCAGAAAA TCTTGGCGCGGATGCAATCCGGGACC TGCTCGAT GGCCCCGGGTTGCATCCG-GACTACA GCACTCAAGTCCCTG  87 54
JLK41_RS20560 NONE
JLK41_RS20555 4367560 .. 4367617 - -21.3  -3.14132   GCCTGGCCTGAGCAA GAGCGTCGCCGCTGAAGCCCCTCCCAC AACC GTGGGAGGGGCTTTAGCCGCGACCATA GGTTCAGTGCTCGTC 100 29
JLK41_RS20525 4361173 .. 4361231 - -33.4  -2.54732   TTGAAACCGATGAAT CGCGGCTGAAGCCGCTCCTACACGAACA GCG CATGCCTGTAGGAGCGGCTTCAGCCGCG ATGCGCTCACAGCCA 100 79
JLK41_RS20520 4360372 .. 4360430 - -14.8  -2.54732   TTGAAACCGATGAAT CGCGGCTGAAGCCGCTCCTACACGAACA ACGCA TGCCTCTGTAGGAGCGGCTTCAGC--CG CGATGCGCTCACAGC  76 34
JLK41_RS20500 4355961 .. 4355983 -  -5.4  -3.69702   GATCAGTGAACACAA           GCAGCGCCAG GGC CTGGCGTCGT           GGGATTACTCGGGCA  57 383
JLK41_RS20450 4345798 .. 4345810 -  -2.6  -4.72272   CTGGTGGATGAAAAA                GGCG TCATC CACC                CTACGGTTGTCGGTA  68 46
JLK41_RS20445 4344163 .. 4344194 - -23.2  -3.59262   CGCGATACCCGGAAA      CAGAAAGGCCGGTC ACAA GACCGGCCTTTCTG       TTTATCGCCCGATGC 100 45
JLK41_RS20435 4342278 .. 4342296 -  -2.3  -3.69434   CCAAGCAAGGTCAAA             CCGCTGA AAGTG CCAGTGG             ACTTCATTGCCAAAG  51 487
JLK41_RS20380 4332697 .. 4332729 - -18.6  -3.57792   GGATCCAGGCGCAAA      CAAAAACGCCCCGA ACCAG TCGGGGCGTTTTCG      TTATCGCGGCGCGAA 100 41
        rplU 4330903 .. 4330935 -  -2.6  -3.89501   CAATACTCCTATAAA     GGGATCGGGGCC-GA CGAA TCAGGCCTGGATACC      GGTGATTTTGATCTC  54 11
        rpmA 4330586 .. 4330606 - -14.7  -5.76237   TACACAAACAAAAAA            GCCCCGTCC TAC GGACAGGGC            TTTTCCAGCGCGTAG 100 45
        cgtA 4329234 .. 4329251 -  -9.8  -4.87665   GCCCACCTACAAAAA             CGCCGC AATTAA GCGGCG              TTGGAAAATTTGCTT 100 39
JLK41_RS20355 4328070 .. 4328089 -    -5  -2.78384   CCCTCTTTCACTAGA            CCAGGATCA GGT TG-TCCCGG            TGCACCAACTCGGGT  43 1
JLK41_RS20350 4327520 .. 4327535 - -11.8  -5.60993   CGCCCGACAAAAAAA              CCGCCC CTCG GGGCGG               TTTTTTCATGGCTTG 100 75
JLK41_RS20335 4324518 .. 4324548 - -19.8  -3.96892   AACGCCCAGGACAAA       TGAAAACGCCCCGC AAT GCGGGGCGTTTTCG       TTGCAGGGGCCGTGC 100 41
JLK41_RS20325 4323705 .. 4323736 - -16.6  -3.86346   CTAGGCCTGCAGAAA      TGCAAACGGCAGCC CGAT GGCTGCCGTTCGCG       TCTATCGCATGCCCC 100 41
JLK41_RS20315 NONE
JLK41_RS20310 NONE
JLK41_RS20305 4321221 .. 4321255 - -19.3  -3.14132   GGCGGGGCCGACGAA     GCCAGCCAGGCCAGC GCCCA GCTGACCAGGCTGGC     CGAGCAACAGCGCCG 100 112
JLK41_RS20295 4318096 .. 4318120 - -17.9  -2.52623   CTCCCCTGAGAAGAC          CTGCGGCGTAC CAT GCACGCCGCAG          CAGCCCTGTCAGCGC  85 34
JLK41_RS20270 4313667 .. 4313684 - -14.1  -5.06414   GCCCCTCAAGAAAAA             GCCCCGC AACT GCGGGGC              TTTTTCGTTCAGCGC 100 34
JLK41_RS20260 4310545 .. 4310562 -  -6.3  -3.30212   AACAGCAATTAGCAA             GCCAAAC GCTT GTTTGAC              CGGGCGGTCACTTTC  52 62
JLK41_RS20255 NONE
JLK41_RS20250 4306990 .. 4307006 - -10.8   -4.8622   GTCCGTAACGAAAAA              GCCGGC ACAAG GCCGGC              TTTTTCGTGGTGCGT 100 48
JLK41_RS20245 4303821 .. 4303859 - -10.9  -3.72695   AGGGCCTGCAGGAAA  CCAAGGCCGCAGCGGCCA TGCT CGGCGGCAGCG-CCCTGG   ACTACCTGGAGCTGA  73 316
JLK41_RS20235 NONE
JLK41_RS20230 4301487 .. 4301504 - -14.1   -4.7497   GTGATGCATGAAAAA             GCCCGGC TCTG GCCGGGC              TTTTTCATGTCCAGT 100 47
JLK41_RS20220 NONE
JLK41_RS20215 4298661 .. 4298674 -  -3.1  -3.05844   GTGTCGAGCGGAACA               TGAAG GCAT CTCCA                TGAACGGGGGATGAT  43 77
JLK41_RS20210 4297953 .. 4297963 -  -3.2  -3.32844   CGGCGCATGCCAGAA                 CTGC GAC ACAG                 GGCCAATCCGGCCAG  47 55
JLK41_RS20205 4297149 .. 4297165 - -15.1  -5.24129   CGCGGCCACAAAAAA              GCCCCCG GAA CGGGGGC              TTTCGTCAGCCTGGC 100 47
JLK41_RS20200 NONE
JLK41_RS20195 4290601 .. 4290621 -  -8.9  -3.88559   AAGTACCCGGAGAAA            CGCGGCCAG GAC CTGGCCACC            ACTCGCAAGGCATGC  68 452
JLK41_RS20170 4285728 .. 4285743 - -11.8   -4.7497   GGCATGCATGAAAAA              GGCGCC CTGA GGCGCC               TTTATCGCAAACTTC 100 95
JLK41_RS20165 4285061 .. 4285072 -  -7.2  -3.39895   CGTCCGATTAAGCAA                GCGG ACGA CCGC                 ATGAACAAGGGTGCA  56 111
JLK41_RS20160 4284257 .. 4284273 -  -2.3  -3.05816   TTACGCCGTATTCAA              GATCA GGCGATT TGATC              CAGGTCAAGCGCGGC  41 40
        clpB 4281547 .. 4281573 - -14.5  -5.24129   TCCGGCTACAAAAAA        CAAAGGCCCGCC AATT GGCGGGCCTT-G         TCGTTTGCCGCTGCG 100 46
JLK41_RS20135 4275428 .. 4275454 -  -8.8  -3.32268   GAAGGACTTCGACAA        GCGTCACG-TC GAGAAA GAGCGTGACGC         CAACCGTGAAGTCCA  58 139
JLK41_RS20125 NONE
JLK41_RS20120 NONE
JLK41_RS20115 4272665 .. 4272717 -   -23   -3.1886   ACCGAACCGCAGTAA CACCCAGACATGAAAAAGCCCGGA CTCGC TCCGGGCTTTTTCATGTCTGCTCG CCACGTGGCAGCAAG 100 50
         fur 4271602 .. 4271631 - -13.7   -4.1822   CCCGAGCCCAATAAA       TAAAAAGGCGACC CGAG GGTCGCCTTTTTC        ATCGCAGCAGAAGCA 100 41
        grpE 4269095 .. 4269107 -  -4.7  -3.91897   CGCTTGACTCAGAAA                TGGGG TCG CCCCC                GAAAATTTCAAGCCT  59 33
        dnaK 4266978 .. 4267008 - -20.5  -2.88544   CGTGAGCTCCAGATA      CGCCGACGCGGGAG AAGG CTCCCGCG-CGGCG       TATCCTGACCGCCAG  95 116
        dnaJ 4265730 .. 4265742 -  -7.7   -2.5294   TACGTTGCATAACAT                CAGCT CCA AGCTG                CAGGCTTCAAGCCAC  52 93
        dapB 4264783 .. 4264810 - -14.2  -5.02074   GCAGGTTGTAAAAAA        GCGGGATGACGT GTGA AGGTCATCCCGC         TTTTTTATTTGAGCC 100 136
        carA NONE
        carB NONE
        greA NONE
JLK41_RS20060 4259364 .. 4259379 -  -4.7  -2.94597   AAGCTGCAAGCAAAT              CAGGA TAAACG TCCTG               CCACTCAAGTACGCC  45 84
        rlmE 4258203 .. 4258221 -    -3  -3.86283   CTAACTTACACCAAA             CGCCCACA TCC CGCAGGCA             CCGTCTGTAACCCTT  54 90
        ftsH 4256191 .. 4256221 -    -6  -3.05769   TGCGCAAAGGACATA       GGCGACCTTAGTGC TCG GCAGCAGGACCGCC       GATTGGCTTCTCGGG  49 2
        folP NONE
        glmM 4253981 .. 4253992 -  -2.2  -3.18582   CACCCTAGGTAGCAA                GCTC AATC AAGC                 ACAGACTTCGGCAAC  43 20
JLK41_RS20030 NONE
        secG NONE
JLK41_RS20020 4252657 .. 4252687 - -22.8  -3.18735   CCAACACTCCAGCAA       CAAGAAAGCCCGCT GAC AGCGGGCTTTCTTG       AGTATGGTACCGAGG 100 30
JLK41_RS20015 4252493 .. 4252508 - -10.4  -5.10461   TTCAGCTAACAAAAA              GCCCCT GAAA AGGGGC               CTGCTGAAACTGGTT 100 36
        rimP NONE
        nusA NONE
        infB 4247722 .. 4247751 - -22.1  -3.66666   CGTAAAAGCGGCAAA       CGCCCGGCCGCGC ATGA GCGGGGCCGGGCG        TTGCATGATCAAGGG 100 48
        rbfA NONE
        truB 4246150 .. 4246161 -  -5.8  -3.57144   CCTCTCATCTGGAAA                CTGC CGAA GCAG                 TCTCAATAGGCCGGG  57 213
        rpsO 4245772 .. 4245829 - -26.4  -2.54204   CGAAAAGCCAAAAGC TGGAAGCCCGGAGCCGCAGGTCGGGG ATCATG CCCCGACTTGCCGCTCCGAACTCCCA GCTTCCAACTTGTGC 100 53
         pnp 4243532 .. 4243549 - -10.5   -5.4833   GCAGGCAATAAAAAA             GGGCCCC CGCA GGAGCCC              TTCTGTTCAAGCCAG 100 52
JLK41_RS19975 4242767 .. 4242796 - -13.5  -3.23274   TCTCCCAGAACTCAA       GAGGGGGCCGGGT GTGG ACCCGGCCGGCTC        GGGTATCAGTCGGCG  78 31
JLK41_RS19970 4242458 .. 4242484 - -15.1  -3.70902   TCCCGGATACGGAAA         GGCCCCGCCAG ATTCA CCGGCGAGGCC         TTTCGACATCCGTGC  93 89
JLK41_RS19885 NONE
        sfsA 4219777 .. 4219791 -   -10  -3.27022   TGCAGCCCACAGGAA               CTGACC GAA GGTCAG               AGCCGGGGCTTTCTG  63 298
JLK41_RS19865 NONE
JLK41_RS19860 NONE
JLK41_RS19855 4214260 .. 4214275 -  -4.6  -2.73875   CTGCGCGCAACATCA              GGTTCG CCCC CGCACC               AGCAGATAAAGGAAG  43 7
JLK41_RS19850 NONE
JLK41_RS19845 4212548 .. 4212568 -  -4.5  -3.59262   CTCCAGATCGGCAAA            GCGCCGAGG ATA CCCCGCAGC            CATCCCGGGAAAGGC  54 43
JLK41_RS19840 4211648 .. 4211666 - -13.1  -4.52589   CCTCCCGACAGAAAA             CCCCGGC CAGAT GCCGGGG             TTTTGCGTTTATGGG 100 476
        mrcB NONE
JLK41_RS19810 NONE
JLK41_RS19805 4204843 .. 4204867 - -17.1  -3.14522   GCAAGTGACACCGAA          CGCGCGCGTCC TCA GGACGTGCGCG          TCAACAGGCGATCGA  89 12
JLK41_RS19795 NONE
        ilvN 4201738 .. 4201756 - -13.1  -4.77036   TTTGACCATGAAAAA             GCCCCGC ACGAG GCGGGGC             TTCTGTTCAGCAGGA 100 54
        ilvC 4199617 .. 4199633 - -10.8  -5.32944   CGCAGAACGAAAAAA              CGCGGC ATAAA GCCGCG              TTCTTTCGCACATCG 100 47
        pssA 4198689 .. 4198699 -  -6.8  -3.07856   AGATGAGAAATTACA                 CCGT CAG ACGG                 ATTTGCGACGACGCA  52 18
        msrP 4197590 .. 4197618 -  -6.7  -3.12895   GCGGCCAGGAACACA        CCGACGCGCCA GAGTCGA TAGCGCATCAG        TAGTACCTCGCCAGG  54 22
        msrQ 4196507 .. 4196524 -  -2.6  -4.46233   GCAATCGCAAATAAA             CTCTCG AATTCA CGAGTG              TTACTTGTGATGCTG  66 490
JLK41_RS19760 4194824 .. 4194834 -  -3.2  -2.92389   CAACTGAGCTACAGA                 CCTA TCA CAGG                 GTCGCCGCGTTACAG  42 106
JLK41_RS19755 NONE
JLK41_RS19750 4194582 .. 4194633 -  -3.9  -4.09685   TTGTACCGGTCAAAA GACCAGAAATCAGCACTCAACAGGT CATC ACCTG--AAGCGCTCATTTCTGAAC TCTCTACGATCATGC  59 46
JLK41_RS19745 NONE
         rrf 4191221 .. 4191254 - -20.5  -3.90744   CTGCCGCGCAAAGAA     GAAACCCCAGACCTC GTTA GAGATCTGGGGTTTC      GTATAGGAGCTTGAC 100 34
JLK41_RS19735 4189928 .. 4189956 -  -2.3  -2.62292   AAGGAGGATAACGGA        GCAGACATGAAGG TCC CCTGAATGCATGC        GCGCATTCTAACCGA  38 95
JLK41_RS19730 NONE
JLK41_RS19725 NONE
JLK41_RS19720 4186309 .. 4186327 -   -16   -4.1891   TCCCCCCAAGAGAAA             GGGCCGCA CAA TGCGGCCC             TTCTCGTTACTGCGC 100 92
JLK41_RS19690 NONE
JLK41_RS19685 NONE
JLK41_RS19680 NONE
JLK41_RS19675 4174472 .. 4174485 -  -8.1  -3.29263   AGATTTTTTGTACAA               CCGGT GATG ACCGG                AAGCTGGCCCGCCTG  59 161
JLK41_RS19670 4173168 .. 4173217 - -10.8  -3.17075   TGCGTTGCAAGGGAA GTGCGAGCCGTTG-GGTGGACGACG CTT CAGCGTCCACCTCAGCG-C-CGCAC CAGGGTGGACGAGCA  65 65
JLK41_RS19665 4171829 .. 4171846 - -11.3  -4.98531   GCCTGAAACGAAAAA             GGATCGC CGAG GCGATCC              TTTTTTCATGCTGGG 100 48
JLK41_RS19645 NONE
JLK41_RS19640 NONE
        rimI 4166371 .. 4166394 - -12.4  -2.72344   GTTCAGCCTGAACTA          CGCGCCCATGC TGT GC-CGGGCGCG          GCTGGACGGGCATCC  69 67
        norR 4161800 .. 4161811 -  -3.6  -3.86897   CCGAGCTTCCAGAAA                GGCA GCTT CGCC                 CTCACCCAGGACTAC  57 270
JLK41_RS19595 4157830 .. 4157841 -  -2.2  -3.38272   CAGCAGCACTCAGAA                CAGC CTGT ACTG                 CCCGTCCAGCAGGCG  44 8
JLK41_RS19590 NONE
JLK41_RS19585 4155812 .. 4155841 - -10.7   -2.9732   CTGCAACCCAAACGA       CGCGCCGCCTT CACCTTCC AAGCCGGCGCG        GGCATCGACTGCCAG  62 468
JLK41_RS19550 4147004 .. 4147037 -  -8.1  -3.32343   GGCAGACTCCGAGAA     CCGGTCCATAGGCGC GCAC GAGCCTATGAACAGA      TTCCCGCCTGCCGCT  59 49
JLK41_RS19545 NONE
JLK41_RS19540 NONE
JLK41_RS19535 4143675 .. 4143692 - -12.7  -4.77036   GGCGACCACGAAAAA             GGGAGCC CGCA GGCTCCC              TGATGAATCGCGTGG 100 48
JLK41_RS19525 4142048 .. 4142061 -  -2.3  -2.78384   TGGTGGTGCAGCACA               CCGTG TGCG CACGC                TTTATTAGCAATTGA  39 77
JLK41_RS19520 NONE
JLK41_RS19515 4140967 .. 4140977 -  -3.2  -4.13014   CGCAGACGTTGAAAA                 GACT CCA AGCC                 GTCAGCTTACCCGCG  59 27
JLK41_RS19510 4139872 .. 4139897 - -14.7  -3.53012   GCTGTCGCGGCTAAA         GCCCCTCCCAC AGTA GTGGCAGGGGC          TTTTCTGGGAGCGGC  90 64
JLK41_RS19485 4132910 .. 4132922 -  -6.2  -2.97513   ATATCGAGAAGGACA                GCGC CGGCC GCGC                CACCTACCAGGCCCT  49 129
JLK41_RS19455 NONE
        sbcD 4125879 .. 4125895 -  -3.5  -4.07568   CGCTGTCGGGCAAAA              TGCCGCG CCA CGCGCCT              AGCGCTCCTGACGTT  59 24
JLK41_RS19445 NONE
JLK41_RS19440 NONE
JLK41_RS19435 4124147 .. 4124161 -  -4.2  -3.14344   CATCGGCGCGATCAA               GGCATG GCT CATGAC               GGCAGCTCATGCAGG  48 84
JLK41_RS19430 NONE
JLK41_RS19425 4122499 .. 4122513 -  -4.2   -3.5944   ATGCACAGGTCGAAA               GCCG TTGGAGG CGGC               CATTCTGGCATTCTC  54 68
JLK41_RS19420 NONE
JLK41_RS19415 NONE
JLK41_RS19410 4117317 .. 4117371 -  -5.5  -3.28497   CGACCCGAAACGCAA GCTGCCGGTGCTCAAC--TTCGGCGGC CAG GCTGCCGAACTGTGGTGCCCCGGTGGC GAGGCGGCGTTCCTC  51 268
JLK41_RS19390 4112868 .. 4112885 -  -9.1  -2.57026   GATATCCAGATCAAC             CTGCGCG AGCG CACGCAG              CCGTTTTCCCTGGCG  54 493
JLK41_RS19380 4111190 .. 4111202 -  -4.8  -3.71517   GAACAGCGAAGAGAA                GGAC CCGCT GTCC                GTGGTCGGCGTCCTG  55 490
        lptF NONE
        lptG 4100647 .. 4100665 - -14.6  -4.84527   GGCACACATGAAAAA             GCCGGTTC AAT GAACCGGC             TTTTTTTGTGGATCT 100 44
JLK41_RS19320 NONE
        queA 4097282 .. 4097299 -  -2.5  -3.74077   CGCGACATACTCAAA             CCTCGGG CCCG CGCGCGG              CGGGATTGCGGGTGA  52 3
         tgt NONE
        yajC 4095706 .. 4095716 -  -4.6  -3.22298   TTTATTGAGCATGAA                 CGAG CCA CCCG                 CTTATGACGCGGGGC  48 80
        secD NONE
        secF 4092848 .. 4092874 - -22.4  -4.82667   CTAGGACAGCAAAAA         GCCGCGGCAAGT TCG ACTTGCCGCGGC         TTTCGCTGACTTTCT 100 58
JLK41_RS19290 4092211 .. 4092224 -  -9.5  -5.38249   ATGAACCATAAAAAA               CGCCC CGAG GGGCG                TTTTTTATTGGCGGC 100 47
        trmJ NONE
        cysE 4088321 .. 4088348 - -10.6  -4.62783   GATTGACCGCAAAAA        GAGGCGGCAT GATAGCAA ATGCCGCCCC         CTCGTGCATCACGCA  89 34
        iscR NONE
JLK41_RS19260 4086462 .. 4086472 -  -2.4  -2.75064   GCGCTCAGCGAACGA                 TCCG CCT CGGC                 AGCTATCAGTGTGCT  39 31
        iscU NONE
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 4082537 .. 4082555 - -10.2  -4.34557   AAGCGAAAAATTAAA             CCCGCGAA TTA TACGCGGG             TTCTGAGATGGCAGC  87 149
         ndk NONE
        rlmN NONE
        pilW NONE
JLK41_RS19210 NONE
        ispG 4077860 .. 4077906 -    -8   -3.6512   CAAATAATCCTTAAA CCTGCTCTCGACACTGCTGC GCTTGCT GATGCAGCGTCAAAAACAGG CTCAAAATGCTCATT  64 126
        hisS 4076548 .. 4076562 -  -2.1  -2.53263   CGTACTCCTAATCGA              GAGCCT GCTC AGGC-C               TGTTGCTGGCAGGCA  37 19
JLK41_RS19195 NONE
        bamB 4074666 .. 4074687 - -17.3  -3.96705   TTCAGAAAATGCAAA           GGCCGCTGC ACGG GCAGCGGCC            GGAATATTTTGCGCT 100 79
         der 4073076 .. 4073098 -  -4.8  -3.53091   ACTTCCTCGGGGAAA           GCTGCAAGCT ACA AGCTTCGAGC           CGCAAGCAAAAGCGG  52 79
JLK41_RS19180 NONE
JLK41_RS19175 NONE
JLK41_RS19170 4070477 .. 4070494 -  -3.3  -2.52464   GCCGTCCGGAATTTA             TTGGCGA ATCG CCGCCAT              CCGCGATCGATCCGC  40 86
JLK41_RS19165 4068591 .. 4068614 - -18.2   -4.1711   AGCAGGCTGAAGAAA          GAACCCCGCC GCTC GGCGGGGTTC           TTCGTTTCAGCAGGG 100 43
JLK41_RS19105 4054949 .. 4054972 -  -5.2  -3.10344   CTGGCAGCGAACAGA          GGCGGCAG CTTAGGCC CTGCCGCG           GGCAAATCAAGCCCC  46 32
JLK41_RS19100 4053974 .. 4053996 -  -4.7  -3.34013   GACCCCGCCAACGAA           GGCAACCGG CTCGC CCAGGCGCC           ACGCCACACCGGCAG  49 398
        guaB 4050521 .. 4050559 - -14.7  -4.06562   AAGTTGAACGAGAAA  GCGACAAGCCACGAAGCC TGAT GGCTT-GTCGCCTGTCGC   TTGGAACTTGAAGCT  95 49
        guaA 4048724 .. 4048740 -  -5.1  -3.88438   GGATAGTAAACAGAA              CGGTC TCAATCC GACCG              CTGTTTACTACCGTC  59 169
JLK41_RS19080 4047256 .. 4047266 -  -3.2  -2.61264   TCTTCGAGTGAGAAG                 GACG GGT CATC                 AGTGATCTCCAGTAT  40 85
JLK41_RS19075 NONE
JLK41_RS19070 4046412 .. 4046430 - -13.1  -4.26903   TTTACCTCAGGAAAA             CCCGCCC TGTCC GGGCGGG             CTCAAACCAATCATG  95 56
JLK41_RS19025 NONE
JLK41_RS19020 4032658 .. 4032671 -  -6.7  -2.83271   GCATTGGTACAACTA               TCAGC GGTT GCTGA                GCTCAATAGGCTATA  50 222
JLK41_RS18995 NONE
JLK41_RS18990 4028558 .. 4028591 -  -4.5  -3.59979   GCTCGCGAGGCCAAA     CGAGAGAGAGTCGCAT TTT AGGCG-CCCTCTTCCG     GCAAAGTCGAACGGC  54 59
JLK41_RS18985 4027076 .. 4027116 -  -2.2  -3.16564   GCTTCATTGCATCAA  TCCGTAGGGTGGCCGGCC ACCGA GGCCGGCCTGAAAACGGC  GCCCACCCTACACCA  43 33
        tadA NONE
JLK41_RS18975 4025877 .. 4025901 -  -6.3  -3.22475   CCGATGTGCAGAAGA          TCCTGCCGCGC CTG GCGCAGAAGCA          GTGGTACAGCAAGAC  53 226
        purL 4020502 .. 4020549 -  -8.3  -3.14344   CATCCGGGCTACGAA CGCCAGGGCCGGCCCCTCTCCCG ATGA CGGGAGAGGGT-CGGCAGAGG-G CCGCTAGGCGGCCGC  57 43
JLK41_RS18960 4020097 .. 4020111 -    -7  -3.85698   GGTCGCCCGCACAAA               TCCGCC CGA GGCGGG               AAACGATTCGCTGCG  65 69
JLK41_RS18955 4019663 .. 4019677 - -12.8   -4.7373   TCACGCCACGAAAAA               GGCGCC ATC GGCGCC               TTTTTCAGAACTGCA 100 30
JLK41_RS18940 NONE
JLK41_RS18935 NONE
JLK41_RS18930 4017073 .. 4017085 -  -6.3  -3.15427   AATACGGGGCATGAA                TGTTC CTC GAACA                GTGAATCAGGAGGGG  50 31
        purT 4015877 .. 4015902 -  -9.7   -3.4252   CGCCAGCCACCACAA         CGCGTGCCGGCT CAC AGCTGG-ACGCG         AACCGCTTGCGCGCT  66 11
JLK41_RS18920 4014793 .. 4014805 -  -6.9   -4.1021   TTCCAGAAGCAGAAA                CGCCG CAT CGGCA                TCGTCGTCGACGAGT  67 377
         ffh 4011461 .. 4011474 -  -3.7  -4.84527   GGCACACATTAAAAA               TGGGC CTGG GCCCG                AAAGGCCGCATATTT  74 104
        rpsP 4011155 .. 4011180 -  -3.1  -3.91897   CGTCGTACTCATAAA         GATGCTTAGGC AGCA GCCTTGGCAGC          TTCCTTGAGCAGCTG  56 5
        rimM NONE
        trmD 4009839 .. 4009854 -  -6.8  -3.01712   GCTGCGCTCCTAAGA              CAAGCC TCCC GGCCTG               CCATCGATACGTTAA  52 37
        rplS 4009426 .. 4009457 - -16.8  -3.92641   AACGCGACCCAGAAA      CGAAAAAAGCAGCC CGTG GGCTGCTTTTTTCA       GAGAAGCGTCCGAAC 100 41
JLK41_RS18880 4008546 .. 4008557 -  -3.6    -4.258   TCAGCCAGGAAGAAA                CGCC GCGA GGCA                 TGCAGTCACTGAGCG  65 415
        xerD 4005159 .. 4005216 -  -9.8  -4.43208   ACAGCCTGAAATAAA CCACCGGCAGAACG-CACCCCGCCCTCG GCAA CGACGGCGGGGTTTCGTTCATCC-GCGA TCAGCCGCGCGGATG  87 26
JLK41_RS18845 4002258 .. 4002279 - -15.1  -4.40804   CAGCACTGCATAAAA           CGGCCGGAG CAAG CCCCGGCCG            CCGAAAAGAGCCGCA 100 76
JLK41_RS18840 4000926 .. 4000940 -  -4.2  -2.77182   GTGGACACGGAATTA               GTTGAG CTG CTCGAC               ACGCAGGCGCATGAC  43 8
JLK41_RS18835 3999416 .. 3999436 - -15.4  -4.06502   CAGGCCCAAACGAAA            CCGGCGCC ACTGG GGCGCCGG            TTGCATGCTGACAGA 100 45
JLK41_RS18825 NONE
JLK41_RS18820 3997483 .. 3997504 - -12.3  -2.66733   CCTGAATCCATACGA           CAGGGACGA TCAC TCGCCCCTG            CCGGTTCATGCAGCC  68 45
JLK41_RS18815 3996757 .. 3996775 -  -4.4  -2.88579   CTAATTGTGCAGACA             GGTTCGGC GAT GCCCTACC             CTGCCAGCCCTGTGT  45 64
JLK41_RS18810 3994526 .. 3994582 - -14.4  -2.90194   ATTGGTCGAACGATA GGGCC-GCGGGATG-GCTGGAGCCGCGA AAA TCGCCGCTCAAGCACCTCCCACCGGACC TAGCAATGAATGGAT  79 121
JLK41_RS18805 NONE
JLK41_RS18800 NONE
JLK41_RS18795 3988251 .. 3988263 -  -9.1  -3.16564   GCGCTACGTTAGTAA                CAGCC TCC GGCTG                GTCAAAACGGCGAGG  61 114
JLK41_RS18790 NONE
JLK41_RS18785 3984743 .. 3984755 - -10.5  -2.52896   GCACGCGTCAAGCGA                CGCCG CGA CGGCG                CATCCGCGAAGCGGC  60 44
        gtfA NONE
JLK41_RS18775 3982632 .. 3982648 -  -2.2  -3.55444   CGTCCACCCTGCAAA             GCTCAGC GCTG GCCG-GC              CAACCACTCCAGCGG  47 11
        recJ 3980719 .. 3980749 - -11.9  -2.71011   AGGCCTGGCGAATTA      GCTCCCGCGCTG CCCCGCCT CAGCGCGGG-GC       GATATGCGCCACCAT  65 14
JLK41_RS18760 3978681 .. 3978709 - -10.1  -3.31144   CTGGCAGGCCGAGAA        CGCAGTGCCGGGC CGC GCCTGGCACAGGG        ACTGATGTGCACGCC  68 44
JLK41_RS18750 3974939 .. 3974962 -    -3  -3.07962   CGGGACAGGTCAACA          TCG-GCTGCAG TGT CGGCGGCGCGA          TCTGGCCACAGGATC  44 143
        prfB NONE
        lysS 3970543 .. 3970576 - -19.7  -3.48115   CGGGCAGAAAACAGA     TAGCAAGAAGCCGCC CTTG GGCGGCTTCTTGCTG      GACCATCAGGCCTGC 100 31
JLK41_RS18730 3969689 .. 3969710 -  -8.7  -4.56597   TCTCCTTGTGAAAAA           CCCTCGACC GCGA GATCGAGGA            CTTACAACCCCAGAA  84 27
JLK41_RS18725 NONE
JLK41_RS18720 3967800 .. 3967821 -  -2.2  -4.12532   CCCTGTACAGAGAAA           TGCGGCGCC CGTCC GGCGCCT-A           GAGGATGTTGGCGTA  57 23
JLK41_RS18715 3967075 .. 3967102 -    -4   -3.2614   GATCGTTCATATCAA        GGCGGGTGAC GGGCGCAG GACAACCGCC         AGGCACGGCACCCTT  45 40
JLK41_RS18710 3966246 .. 3966285 -   -15  -2.66183   GGATAGAACAGCAAC  CCGCTGCAACCGGCCAGCC ACA GGCTGACCAGCAGCAG-GG  CCCAGCGCCCGAGTC  76 40
JLK41_RS18705 NONE
JLK41_RS18700 3965032 .. 3965055 - -16.8  -3.15544   GCCGAGCGCCATGAA          GAAACCCGCC TGTT GGCGGGTTTC           TTGTTTTCCGGGGTT  89 67
         ppc 3960168 .. 3960202 -  -4.2  -4.86033   AAAGTCGGATAAAAA    CCCT-CCGCCCGATG CAGTGC CAACAGCCGGCAGGG     GCGGCGCGATACGCG  78 62
         adk 3959316 .. 3959345 - -15.7  -3.87075   ACCATGTTGCAGAAA       CGACCAAGGCCCC TTTC GGGGCCTTGGCAG        GAGGACGACTGGCGG  95 48
JLK41_RS18670 3958325 .. 3958345 - -10.4   -5.4505   CGGCTGAAGAAAAAA            GAGCCGGC ATTAG ACCGGCTC            GAGGATTTTTTTTCC 100 87
        tsaB 3957583 .. 3957616 -  -3.7  -2.84325   CCTTGGCAAATACCA     TCCGCCCGTCG-ACGC CGC GCATCCGACCGGCTGT     CACGCCGGCGGCGCC  42 25
JLK41_RS18660 3957119 .. 3957134 -  -2.4  -3.05596   CATCGGTCGATGCAA              GCCACC TGGC AGAGGC               GCGGAAAACGCGGTG  41 49
JLK41_RS18655 NONE
JLK41_RS18650 3955508 .. 3955539 -  -6.4  -3.01712   CCCTGCCCTGCAACA      GCCAGACGCGACGC CCTA GCGGCACATCCGCC       ACATGCCCATGTCCA  52 9
JLK41_RS18640 3953360 .. 3953375 -  -4.7  -3.36327   CCACTTCACCGACAA              GGAGA CGCTGT TCTCC               GCCGCGATCAAGGCC  51 480
JLK41_RS18630 NONE
JLK41_RS18625 3948685 .. 3948702 - -12.7   -4.2074   TCGGCAAGACAGAAA             CGGGAGC CAAG GCTCCCG              TTTTTTGTGGCCGCT  95 90
        ybaK 3944882 .. 3944898 -  -3.5  -2.78384   TCGCTGTTGACCACA              GCGGGGG CGT CCGGCGC              GCTCAAGCCTTGCCG  41 28
        glpK NONE
JLK41_RS18595 3941858 .. 3941884 -  -4.2  -3.23692   CACGACCAGGAGGAA         GCCTTCGCCGTC AGC GACCACGTCGGC         GTGTTCAAGGATGGC  47 513
JLK41_RS18580 3938647 .. 3938669 - -14.9  -3.14132   CGTTCGTCTCATGAA           TCGGCAGGC ATCAA GCCTGCCGA           TTCAGGCGCGTACCG  82 47
JLK41_RS18575 3936354 .. 3936372 - -14.6   -4.1899   CGATTGTAGCGAAAA             GCCGAGCA CAA TGCTCGGC             CTTGCCATCGCCGCC 100 95
        grxD 3935921 .. 3935940 - -13.6  -4.20136   ACGCCGAAAAGCAAA            GAACCCGC CGAG GCGGGTTC             TTTTTTGTCTGCCGG 100 49
JLK41_RS18550 3932156 .. 3932167 -  -5.8  -2.62616   TCACTCCCGAGAGTA                GAGC CTGT GCTC                 GACGCGGCACGGTCG  46 67
JLK41_RS18545 3931114 .. 3931130 - -10.9  -3.48395   AGCCCCGCCACACAA              TCCACAG AAC CTGTGGA              TAACTCCGTGCACAA  74 278
JLK41_RS18535 3930560 .. 3930594 -  -5.4  -2.80816   GTTGCAGTGACCAGA     TGCCGGCCAGGAGCGG CAC CAGCGCCGCGACGGCA     CCGATGGCAAGAGAG  46 124
        rmuC 3929082 .. 3929098 -  -3.6  -3.86346   GCAGCCGCGGAGAAA              GGCGCC GCGTG AACGCC              TGGGCAACGCGGGTG  56 78
JLK41_RS18515 3925799 .. 3925822 -  -9.5  -2.64616   CCTGCATCCAGATGA          GCGCGGCAG CAGCGC CTGCCGGGC           CTTGCTGCAAGCACT  54 386
JLK41_RS18500 NONE
JLK41_RS18495 3919960 .. 3919984 -  -9.2  -3.61398   CCTGCCCGTGAAGAA         CCGGCGTACCC GTGA GGGG-CGCCGG          TTTTTTTATGCCTGG  68 79
JLK41_RS18485 NONE
JLK41_RS18480 3916858 .. 3916897 - -20.8  -3.60502   ATACAGACCCGCAAA  CGAAAACGCCGCGCCCCT CTGC AGGGACGCGGCGTTTGCA   TGTGCGCCAGTCGGT 100 51
JLK41_RS18470 NONE
JLK41_RS18465 3912496 .. 3912514 - -13.1  -3.68222   CCGTAATCCGAAGAA             CCCGGCC TCGAT GGCCGGG             TTTTTCGTATCTGCC  82 49
        sbcB 3902205 .. 3902221 - -13.7  -4.13767   TCCCGCAGCGCAAAA              CGCCAGC CAT GCTGGCG              TTTTTTATTGCCGTC  95 216
        purU NONE
JLK41_RS18405 NONE
JLK41_RS18400 3899987 .. 3900002 - -11.8  -3.96148   CTGGCTCATGAGAAA              GGGCGC CGTG GCGCCC               TTTCTTCATTCCTGC  82 31
JLK41_RS18390 3896056 .. 3896079 -  -9.5  -2.64616   CCTGCATCCAGATGA          GCGCGGCAG CAGCGC CTGCCGGGC           CTTGCTGCAAGCACT  54 401
JLK41_RS18370 3892992 .. 3893005 -  -3.7  -3.05816   TGACGCTCTACGGAA               CGGCG TTCT CGCTG                CTGTTCATCCTCATG  44 239
JLK41_RS18335 3885653 .. 3885666 -  -8.1   -3.4252   GGTCAGCCAGGAGAA               GCTGG CCGA CCAGC                AGAACAGCGTCCGCC  59 504
JLK41_RS18270 3870106 .. 3870118 -  -3.3  -4.37886   CGACCGGCTATAAAA                GGCTG GTC CAGGC                CAATAGCGAATCGTA  65 195
JLK41_RS18265 3868031 .. 3868068 -  -4.1  -4.28049   GCTAAAAGGTGAAAA   CCTCAGC-ACCTACGC TCATTAG GCGCAGGTTGGAGAGG   CTAACCTCCTCTAAC  62 293
JLK41_RS18260 NONE
JLK41_RS18255 3867055 .. 3867070 -  -4.6  -3.75115   GTGGGATAAAATTAA              GCTCAC TCAT GGGAGC               TTTGTATAAGACTTA  57 16
JLK41_RS18250 3866506 .. 3866519 -  -5.2  -3.89614   CGCAATCGCTATAAA               CCGG TAAGAG CCGG                TAATGTCGCTTTCGA  59 73
JLK41_RS18205 NONE
JLK41_RS18200 3854721 .. 3854779 - -13.9  -2.55015   ACGCCAGCGAACGTA GGGTGGATCACGCTTCAC-CGATCCACCG TTG CGGTGGA-CGTGAAAAGCGACGTCCACCC TACATTCCCGGATTT  72 101
JLK41_RS18185 3848451 .. 3848488 -  -8.4  -2.84803   GGAACACATCAAGGA  TGCCGTGGCCGC-AGCCG CCAG CGGCGAGCGGG-ACGGCA   AGATCCTCCTGGTGC  55 122
JLK41_RS18175 NONE
JLK41_RS18170 3845380 .. 3845422 -    -6  -3.75738   CACCATCAGCAAGAA GTGATCGTTCGCGGGTGCGC CTC GCGCACCCGACACCCCTCCC CCGCCTTATTCGCTC  60 31
JLK41_RS18160 NONE
JLK41_RS18155 3843947 .. 3843966 - -13.6  -5.46657   GAGGCCAACAAAAAA            GGCCAGCA TCGC TGCTGGCC             TTGATTTTACTGGTG 100 36
JLK41_RS18150 3842652 .. 3842662 -  -3.2  -3.26471   CTAGCGGTACAGTAA                 CCAG CTT CTAG                 AAATTTCGCTAAATT  45 143
JLK41_RS18110 3832658 .. 3832673 -    -9  -3.31461   GATGGAGCGCTACAA              GGCCAA GCTA TTGGCC               ATCGCTTCGGCGTTG  61 359
JLK41_RS18100 3831253 .. 3831265 -  -3.3  -2.77283   TGAGCAACAAAGTCA                CCACT ACT AGAGG                CGTAATTCCTTTCAT  41 43
JLK41_RS18095 3829624 .. 3829641 -  -7.7   -5.4111   AAGAACCACAAAAAA             GCCCTCA GAAG TGAGGAC              TTTCCATTAGTCCTT 100 365
JLK41_RS18090 3827941 .. 3827962 -  -4.3  -4.56775   ACGCTCGGCCAAAAA           GCCGGCCGA CCGC TCAACCGGG            CGCGTGTGCGCGCTA  70 377
JLK41_RS18070 3824987 .. 3825009 -  -9.8  -3.28924   TACGGCCGCGCAGAA           CCTGCTGCGC AGC GTACAGCAGG           AGCTGGAAACCCCCG  63 218
JLK41_RS18055 NONE
JLK41_RS18050 NONE
JLK41_RS18045 3819915 .. 3819938 -  -9.5  -2.64616   CCTGCATCCAGATGA          GCGCGGCAG CAGCGC CTGCCGGGC           CTTGCTGCAAGCACT  54 386
JLK41_RS18020 3816174 .. 3816201 -  -9.8  -3.14132   CTTCCTGCTGACCAA        CGCGGCGAAG CTGTTCCC CTACGCCGCG         CTGGGCCAGTTCAGC  62 199
JLK41_RS18010 3814496 .. 3814553 -  -9.9  -2.50935   AGCGCATCCAGCAAC GCC-TGGATCAGATCCTCGAGCGCCT GCCGGAG AAGCGCCCGGAGGCCTGATCCACGAC GGCACGCCGGTTCAG  60 37
JLK41_RS17985 3811301 .. 3811345 -  -9.2  -3.14211   ATGGGTGGCGAGGAA TTCGCCGTGCTGCTGCCCGGCA CCC CGCCGGGGCGC-GCACGG-GAG ATCGCGGAAAGCCTG  59 267
JLK41_RS17975 3809003 .. 3809035 - -10.6  -2.75074   GCGACGTGAAGACCA     CCTTCATCGACGGCG GCTA CGACGTCGACG-AGG      AAGTCGCGAAAATCC  60 466
JLK41_RS17965 3808090 .. 3808114 -  -5.6  -4.73613   CTACTACGAAGAAAA          GGGGCTGATC CGCTC GATCGGCCGC          AACGGCCTGAGGCGG  81 330
JLK41_RS17955 3807456 .. 3807481 -  -6.7  -2.71731   TCGAGGGCTGAACCA         GGCGTCAGCCC AGCC AGGCCAGCGCC          GCCCCGCTCAGGTAC  50 4
JLK41_RS17935 3802664 .. 3802680 -  -4.3  -3.01712   GGTGCCGGCGCAATA              CACCGCC GAC AGCCGTG              ATGGCCGCCTGATGC  45 422
        leuA 3800112 .. 3800127 -    -9  -3.53012   TGCTCGTCGCCGAAA              CCATCG AGCT CGATGG               CGTCAGCGAGCAGGC  64 205
JLK41_RS17890 3793591 .. 3793608 -  -4.1  -4.09685   GCTGACGGGCGAAAA             GATCAGC CTGT ACTGACC              GCCCTCTTCAGCGCT  59 33
JLK41_RS17870 3790917 .. 3790931 - -11.4  -3.53811   TCTATCTGCTGGAAA               GCGTGC TGG GCACGC               TGTGGGTCTGGTACT  72 164
JLK41_RS17855 3788529 .. 3788559 - -16.8  -3.53012   TGCCGCTGTTCGAAA       CCCTGGGCCTCCAG GTG CTGGCCGCCCAGGG       CGCACAGGTGCTGAT  89 325
JLK41_RS17840 3786522 .. 3786550 - -13.1  -2.73681   CATCTACGTGAACGA        TTCGCAGCCCCTG CCG CCGGGCCTGCGAA        TCGAGCACCAGGAGC  67 260
JLK41_RS17830 NONE
JLK41_RS17825 3785260 .. 3785287 -    -2   -4.2828   CGCCAGCCAGCAAAA        TCGTCGCGA-ACG GGG CATCTGGCAACGA        CGTTACTGGGAGCAT  62 265
JLK41_RS17810 3783200 .. 3783218 - -13.1  -4.30161   CGAGAGAAAATGAAA             GCCCCGC CTCGT GCGGGGC             TTTTCTATTTCACGA 100 176
JLK41_RS17795 3776971 .. 3777005 -  -2.8  -2.57067   GGAAGATCGAATTCA    TGGGCGCCCGGTCAGT TGCGC AC-GA-CGGGCGCCGC    GTCGCCGTGCGGCAG  38 2
JLK41_RS17790 3775159 .. 3775171 -  -4.8  -3.90112   TCTCGCTGAAGGAAA                GCCT GTTCA AGGC                GCTCTACCCGCTGAC  61 218
JLK41_RS17780 3771818 .. 3771838 -  -9.6  -3.15861   CAGCACTCGCACCAA            TCCGGGGC GCCTT GCCCCGGG            CGCGCCGATATGCAC  61 524
         zwf NONE
         pgl NONE
JLK41_RS17750 3766696 .. 3766716 -  -2.6  -3.21099   TGGCGCCACTATTAA            GTCATC ATTCAACTA GATGAC            CATATAAGTGACCTT  43 68
JLK41_RS17745 3764511 .. 3764541 - -13.3  -2.62192   CCCCACTGAATGAAC      GCCCGGCG-ACAGC ACGC GCTGCACGCCGGAC       CCAGGCCACTCTAGT  72 134
JLK41_RS17740 NONE
JLK41_RS17735 3763143 .. 3763165 - -11.3  -3.03159   TCAACCTGCCGAAGA          GCG-AGGCGC AGGC GCGCCTGCGC           GAGCTGTTCGATATC  62 329
JLK41_RS17700 3753576 .. 3753613 - -13.4  -2.57344   CATCGCCTGCAGAAC   CGCCAGGCGCTGCGCCA GCGGG TGGCCCGG-GCCTGGCG   CGGCCAGCCATGAGC  72 204
JLK41_RS17685 3750886 .. 3750904 -  -7.4  -3.05816   GTAGCCCGGATGCAA             TCCGGG GCGATTT CCCGGA             TTGCATCCGGGCTAC  52 47
JLK41_RS17680 3749695 .. 3749705 -  -6.8  -3.85698   TCGGCTCCTCAGAAA                 CTGC GTG GCAG                 CTCGAGCAGGTGCTC  65 8
JLK41_RS17675 3748174 .. 3748190 -  -2.2  -3.71873   TGAGTCATATCGAAA              GCCTCA TTTAC TCAGGC              GCCACAGCATTCTTG  52 160
JLK41_RS17670 3746937 .. 3746992 -  -3.7  -2.60075   TCCTGCGCAATGAAT GGCGGCACTCGGCCGGGAGGCGCTTG TCGGT CATACGGCCCCCTGCTG-GTGCAGGC GCTGGATATCGCCGG  40 0
JLK41_RS17665 3745955 .. 3745979 -   -10  -3.36515   TGGTACGTGGAAAGA         GC-CGGCTGCC TTGG GGCAACCGTGC          GGTTACATCACTGGA  68 85
JLK41_RS17660 3744869 .. 3744902 - -21.9  -3.01712   CCTTCTGCTCCAACA     CGAAAACGCCCGGTG CAAG CACCGGGCGTTTTCA      TGTGCAGCGCAGCAT 100 40
JLK41_RS17645 3741191 .. 3741202 -  -5.8  -3.66844   TTCACATTTGAACAA                CCGA GCCT TCGG                 CATTCACGAAGGCAA  57 29
JLK41_RS17640 3740016 .. 3740032 - -13.7  -3.57144   TTCGTCATTGGCAAA              CACCGCC TTA GGCGGTG              CTGAATGGCGAACCA  88 79
JLK41_RS17635 NONE
        dctM 3737971 .. 3737989 - -13.1  -5.40072   GCCCGCCGAAAAAAA             GCCCGGC ACAGG GCCGGGC             GCAGAGGTAGACGCG 100 56
         acs 3735696 .. 3735724 - -18.8  -4.94972   GAGCACAATGAAAAA        GCCCCGCCGGGC TTGTG GCCGGGCGGGGC        TTTCGTTTGCCGTTG 100 45
JLK41_RS17615 3734043 .. 3734087 - -19.9  -3.05384   CGCGCTCTGAGCCAA CCCGGCGCCTGCGACGCCCCG CAA CGGGACGTCGCAGGCCCTCAG CCCACCGCGCGCAGC  95 22
JLK41_RS17605 3732555 .. 3732566 -  -7.2  -3.30441   CAGCATCGGCGACAA                CCGC CTGG GCGG                 CTGGTATGCCTACCG  54 300
JLK41_RS17575 NONE
JLK41_RS17570 3726611 .. 3726623 -  -5.5  -3.13899   AATCTGCGACGAAGA                CGCCA CAC TAGCG                GCAATTAGCCATCTA  50 133
JLK41_RS17565 3725656 .. 3725673 -  -2.6  -2.69151   TCGGCGTACAGATCA             GCCTCG GCCGGA CGACGC              AGCGCGAGCTCGACG  38 185
JLK41_RS17545 NONE
JLK41_RS17540 3720740 .. 3720756 -  -7.2  -2.72344   TGGCAGCGGCAACCA              GCGCCG TGGCT CAGCGC              CCATCGCCGGCCTGC  50 19
JLK41_RS17535 3719193 .. 3719218 -  -3.2  -3.61178   CCCATCCACCCGAAA         GGCGCGCTGCG AAACG CCCAGCA-GCC         ACTCGTCCCCGCAGC  51 110
JLK41_RS17530 3717792 .. 3717813 -  -2.3  -2.93853   CTCGGGTAACGAAAG           GATGCA-TGA ATG TCACTGCCTC           GTTACATCGGCGGCG  40 16
JLK41_RS17525 3716403 .. 3716425 - -11.9  -2.78816   GCAGGGTTCAGGAGA           GGGGGCCGG GCGTG CCGGCCCGC           TGGTGCTACTGGGCG  65 31
JLK41_RS17520 NONE
JLK41_RS17515 NONE
JLK41_RS17510 NONE
JLK41_RS17505 3711761 .. 3711817 -    -8  -3.18264   CGGTGGATCGATGAA GCGCGATCCACCCTACGCCTCG CCATCCCCCCATC CATGCCGTAGGGTGGATGACGC TCTTTTCATCCACCA  57 165
JLK41_RS17490 NONE
JLK41_RS17485 NONE
JLK41_RS17480 NONE
JLK41_RS17475 3704501 .. 3704540 - -13.4  -2.78384   TCGGCTTCCAGGACA  GCCTGCACCGCATGCCGG TCGC CCGGCATGCCGGCCTGGC   CTCCTCGTTCGGCCT  67 479
JLK41_RS17455 3697891 .. 3697912 -  -2.1  -3.15579   CGAAGGCCTGATCAA           GTTGCTGGC GCTG GCCAACGGC            GCATGGGCAGCGCTC  42 219
JLK41_RS17420 NONE
JLK41_RS17415 NONE
JLK41_RS17410 3691601 .. 3691630 -  -7.1  -3.83205   AGCCGGGATACGAAA       CCCTACGCACACGC GTT GCA-GCGCCTAGGG       TCGCGCTGGCCGTCA  63 38
JLK41_RS17405 3690135 .. 3690148 -  -2.3  -3.35542   GCCACCTGGAAAAAT               GCGCT GTTC AGAGC                GTTTTTGTCAGCTTT  44 33
JLK41_RS17400 3689673 .. 3689691 -   -16  -4.61873   CCCCAGAAACGAAAA             GGCCCGTC GAT GACGGGCC             TTTGCATTGGAGTCT 100 46
JLK41_RS17395 NONE
JLK41_RS17390 3688513 .. 3688532 - -11.4  -2.62192   GCGCACCGAATGAAC            GC-GGCCGC CCG GCGGCCTGC            TGATGCCCTCCCCCA  64 350
        tcdA 3685146 .. 3685158 -  -9.1    -3.727   TCCAGCATAGTCAAA                TGCGC AAC GCGCA                ACGCCCTCAACCAGC  71 32
JLK41_RS17365 3684194 .. 3684240 -  -2.9  -2.50493   TTGAGCATGAAAATC CTTGGCA-GGCGCAGGAC-GAGC GTC GCTCAGTCCTGCGCAACGTGATG TGAGGTACTGGGCTG  37 5
JLK41_RS17360 3683559 .. 3683571 -  -7.7  -2.73364   GCTCGATCTGAACGA                CTGGT TCA ACCAG                CTGGGCCTGCAGCGC  51 173
JLK41_RS17335 3678449 .. 3678493 - -10.5  -3.59315   TGAACGACGTCGAAA CCGTCGCGGCCCAAGCCCCTG CCA CAGGGGCCTGGGCCTGGAATT TCGGTTGTGTAGCCC  73 107
JLK41_RS17325 3675090 .. 3675148 - -19.9  -2.62184   CCCCGGCGCAGATCA CCTTCTGACCCCGGCTCATGATGTGGCGC CGG ACGCCACATCATGAGCCAGGATCAGAT-- CCTGAAGCTGTCCAC  95 20
        rpsB 3670501 .. 3670515 - -12.8  -4.59773   TTTGAGTGGCAAAAA               GGGGGC CTA GCCCCC               TTCTTGCACAGCGCA 100 67
JLK41_RS17305 3669510 .. 3669537 - -14.8  -3.55444   CCCCTAGTCGGCAAA        GAGGCCGCACGC GCAA GCGGGCAGCCTC         TTTGGGGCACTCACC  90 52
        pyrH NONE
         frr 3668089 .. 3668103 -  -3.5  -3.55761   CACTCAGCCGTCAAA              CGG-CC ATCA GGTCCG               CTTCCTTGACCTCCA  49 6
        uppS NONE
JLK41_RS17285 3666507 .. 3666531 -  -2.7  -2.62263   ATGCGCTGCACAGCA          CTCACAGCGCG CCC CACCCTGCCAG          CCAGAGCAATGCGGC  38 2
JLK41_RS17280 3665320 .. 3665343 -  -3.8  -3.06696   CGTCGGGTCAACACA          GGCTCGCTCAA TGA CCG-GCAAGCC          ATTCTCCGGCCAGCG  43 9
        rseP 3663856 .. 3663875 -  -2.1  -4.48741   CAACTGACGATAAAA            GCTGCCGC TCGAG GCGACA-C            TTCTTGTAAATCTCA  66 61
        bamA 3661422 .. 3661433 -  -4.4   -3.3785   TCAACTTACGCACAA                TGCA CTCC TGCA                 ACAAAACTGTTGGCT  49 55
JLK41_RS17265 NONE
        lpxD 3659837 .. 3659859 -   -12  -5.27476   TGTAAGAAAAGAAAA           GAGCACGGCA GCA CGCCATGCTC           AGGCATCAGATGAGA 100 24
        fabZ NONE
        lpxA NONE
        lpxB 3657439 .. 3657471 -  -3.9  -3.62096   CTCGACCAGGGTAAA      GTCCAGGCCCAGCTG CAT CAGCCACGCCCTGCC      AGCTTGAGCACGGCA  51 10
        rnhB NONE
        dnaE 3653109 .. 3653131 -  -5.5  -2.66733   CCTTAAGGGATAGGA          CGCAGCGGGT CGAC ACCCGCAG-G           TGCCTTTGCCGATGC  46 66
JLK41_RS17230 3652043 .. 3652064 - -15.9  -4.19746   CGCAGCTTAAAACAA           CAACGGGCC CGAA GGCCCGTTG            TGATTTGCACAGGAT 100 44
        tilS 3650626 .. 3650639 -  -4.5  -4.20768   ACTCGCAACAAACAA               TGGCA AGCC CGCCA                AGCTCCCTGGGGGAG  65 88
JLK41_RS17220 NONE
        kdsA 3647952 .. 3647986 - -13.5  -3.06162   TAGTTGACGGTAAGA     CGGCAGCAGCGGGCT GCGCG AGACCGCCGCTGCCC     ACGGGCAGGTCGGCG  76 105
         eno 3646622 .. 3646635 -  -5.9  -3.04461   GAGCGACGCGCAACA               GGCCG TTGT CAGCC                GCGGAACTCGGCGCG  49 20
JLK41_RS17205 NONE
JLK41_RS17200 NONE
        ispD 3645160 .. 3645177 -  -2.6   -4.0162   GGCCCACAGGACAAA             CGCTGC AAGGTG GAAGCG              CGAATGAAGGGCCGT  56 167
JLK41_RS17180 3642647 .. 3642679 -  -6.1  -3.32963   AGCGTCAGGCCACAA      GCGACAGGCCACTGG TCG CTTGTAGCTCGTCGC      TTGCCGCTATCAGAA  52 35
        fghA 3641708 .. 3641728 - -12.6  -4.16305   ACGCATAAAGAACAA            CGCCCTGA AAAAG TCAGGGCG            CAATTCTAACCGGTT  95 72
        ispF NONE
        truD NONE
        surE NONE
JLK41_RS17155 NONE
JLK41_RS17150 3637736 .. 3637751 -  -3.2  -2.76453   GCAGAACGTGAACGA              CGGTGCG ACT CAC-CCG              ATGGCTCCCTGAATG  41 69
JLK41_RS17145 NONE
        rpoS 3635735 .. 3635750 - -11.8  -5.28176   GGGACGCAGAAAAAA              CCCGGC CGAA GCCGGG               TTGGTGATCGAGGCG 100 45
JLK41_RS17115 3628839 .. 3628852 -  -3.7  -3.04144   CTCGCATGTTCAAGA               GGGCC GGCA GGCCA                CCAACAACTGTATAA  43 76
        recA NONE
        recX 3627155 .. 3627168 -  -3.7  -4.15044   TCGCTGCTGAAGAAA               GCCGG CAAG CCGGA                GTTCCTCCTGCTCCC  61 154
JLK41_RS17095 3626045 .. 3626055 -  -8.2  -2.62263   ACCTGCGCCAGATCA                 GCCC AGA GGGC                 GTAAGCTCAGCAGCT  52 12
JLK41_RS17090 3624534 .. 3624557 -    -8  -3.50393   GGCGAGTGCACAGAA          GGTCCGCCAC GCCG GCAGCGGGCC           TTCGCAGGCAGACAT  62 400
       rlmKL 3622046 .. 3622066 -  -4.5  -3.37344   CGGCTACGCAATCAA            CGCGCGGTG AAG CGCCAGGCG            CGATGGATCCTGGCA  49 1
JLK41_RS17070 3619974 .. 3620026 - -10.5  -3.33815   AGGCCTCGGAACGAA GCCTGGTCGGCCGGGAGGGCGCTGG AGAGA CCAGCGCCG-CCTGTC-GATCAGGC CTGGGTGATCGGCTT  68 20
JLK41_RS17050 3613046 .. 3613071 -  -3.1  -4.19624   TACGTGCAACAGAAA         CTGGCCGAGCG GGCG CGCCTGGTCAA          CCTGCGCCAGCAGTT  63 472
JLK41_RS17025 3609569 .. 3609584 - -11.8  -5.49234   ACAGGCAATAAAAAA              CCGGGC AACT GCCCGG               TTTTTTATTGCCTGG 100 68
JLK41_RS17005 3605643 .. 3605658 - -11.8  -3.59979   GTCCTCGATGCGAAA              CGGCGC CCAG GCGCCG               CGTGACAGGGCTGCA  77 61
JLK41_RS17000 NONE
         hda NONE
JLK41_RS16970 3600037 .. 3600049 -  -3.3  -3.79787   CGATAGCAACTGAAA                CTGCC TTT GCCAG                AAACATGCCAGCCCT  54 382
JLK41_RS16965 3599753 .. 3599771 - -17.4  -3.52073   CCGGCAAGACCAGAA             CCCCGCGC ACT GCGCGGGG             TTTTCGTTTCAGCCG 100 34
JLK41_RS16950 3597228 .. 3597248 -  -3.2  -3.07994   GGCAAGCTCATGGAA           CACGGCGCA GATT CG-GCCGCG            ACAAAAGCTTAGCAT  43 88
JLK41_RS16945 3595882 .. 3595896 -  -2.1  -4.96646   CCAGATAACGAAAAA              GTCGGC GACA GCC-AC               AACCGCTGTCGGTAG  75 167
JLK41_RS16940 NONE
JLK41_RS16935 3593653 .. 3593687 -    -2  -4.08767   GCGACGCTCGTAAAA    CCGGCGCATGCCACC TTCCGG GGCGGG-TATGCCGG     CTACTTCCAGGACCC  57 100
JLK41_RS16925 3591155 .. 3591166 -  -3.6  -2.59431   TCTCCTGATAAGTGA                CCGG TTGG CCGA                 CGCGGCGGCAGCGTT  40 86
JLK41_RS16920 3589532 .. 3589548 - -11.5  -3.28712   GCTGCGCGGGCAGAA              GGCGGGC GTC GCCCACC              TGACGGAGAACAAGC  68 431
        ttcA 3586864 .. 3586886 -    -7  -4.18934   TATCAGGTCAAGAAA          GCG-CGGCA CGCCGC TGCCGTCGC           CCCGTAGGGTGGATG  71 105
JLK41_RS16895 3584962 .. 3584982 -  -6.7  -2.52464   TCCCGCCCGAAGGCA            CTGCCGCTC GCG GATCGGCGG            GCGCCCCTAGCGCAG  48 32
JLK41_RS16890 3583840 .. 3583853 -  -8.1  -3.53224   GATTTCCTCGGCAAA               CCGCT GGAC AGCGG                CGTGCTCTACAGCAC  60 387
JLK41_RS16860 3575499 .. 3575518 -    -7  -4.56775   ATTTTTTCTGAAAAA            GACGCGTC GCCC GCCGCGCC             TCAATCCATTTCCCC  76 26
JLK41_RS16855 3575307 .. 3575317 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGT                 CGGCCGGACTTGCGT  39 54
JLK41_RS16850 3575211 .. 3575224 -  -4.5  -3.59979   CCTTGCCATCTCAAA               CCGAC CAAG GTCGA                TCTGGGAAATAATGG  54 38
JLK41_RS16845 3575029 .. 3575052 - -16.8   -5.4833   GCAGGCAATAAAAAA          CCCGTCGATC TCGC GATCGACGGG           TTTCGTATATGGCGC 100 35
JLK41_RS16830 3570499 .. 3570519 - -18.3   -3.8377   AAGCCGGATAGCAAA            CGCCCCGCT GGA AGCGGGGCG            CTGTTTCGATCAGAG 100 35
JLK41_RS16825 3569781 .. 3569809 -  -9.5  -4.14511   AAGTCTAGGGGAAAA        GCCAACCCCAGCA ATG TGACTGGGTTGGC        ACTCACTCTGCCAAC  79 247
JLK41_RS16820 NONE
JLK41_RS16815 3567347 .. 3567360 -  -3.8  -2.63723   CGCTCATGAAGTAAT               CCAG GCTCCG CTGG                TCAGCCCTGAGTGTA  40 26
JLK41_RS16810 3566219 .. 3566239 -    -4  -3.58343   CGCAGCACGTCGAAA           GCAGCTCCGC TCA GCG--GCTGC           GTTCGGTACGCCCGC  51 15
JLK41_RS16800 NONE
JLK41_RS16795 NONE
JLK41_RS16790 3562397 .. 3562455 - -25.5  -3.34013   GAGGTCTCCAATGAA TCGTAGGGCGGGTGAAACCCGCCAAAA TACTG TTCTGGCGGATTGCACCCGCCCTACAG GTCAAAAATCGAATC 100 39
JLK41_RS16785 NONE
JLK41_RS16780 NONE
        pepN 3558506 .. 3558532 -   -16  -5.45652   ACGGGTAACAAAAAA         GTGTTACCAGCC ATC GACTGGTAACAC         TTTTATTGACGCCGA 100 47
JLK41_RS16770 3555989 .. 3556020 -  -4.3  -3.02043   AATTCTCCGTGAAGA     GTCTGGCCGGGCGCC CGCA GGCGCCCGG-C-GTT      TTTCTGGTTATAGGT  46 42
JLK41_RS16765 3554555 .. 3554576 - -15.9  -4.80882   AGCTGATACGAAAAA           GGCCGCTAC TACT GTAGCGGCC            TTGGCGCGAGGCTAC 100 48
JLK41_RS16760 NONE
JLK41_RS16755 3550888 .. 3550907 - -16.4  -5.65177   ACACGCATAAAAAAA            CCGCGGCC CTGG GGCCGCGG             TTCTCGTCCTGCGCT 100 48
JLK41_RS16700 3538691 .. 3538703 -  -7.7  -3.30771   GGACATCGCCGACAA                GATGG AGA CCATC                CACGTGCATACCGGG  56 186
JLK41_RS16685 3534246 .. 3534271 -  -6.1  -4.07687   ACGGCTCCTGGAAAA         CCTGGGCA-AGG CCG CCTGCGCCGAGG         CATGACAGGCAGGCG  65 112
JLK41_RS16680 3533041 .. 3533067 - -22.4  -5.08088   AAGCTTGAAGAAAAA         GCCCATCGCTGC GAC GCAGCGATGGGC         ACTGACATCAGCGCT 100 33
JLK41_RS16675 3532460 .. 3532477 -  -6.9  -2.79098   TTCACTCACGAATCA             GTGCGGC GATG GCCGCAA              TTAAGGATCGAGCCA  50 47
JLK41_RS16670 3531095 .. 3531129 -  -6.3  -4.89567   GTGCAAAAGAGAAAA     CCATGGCCCGCCAGC GCAGG GCGAACGAGCCATGC     AGAAGGGTCAGGCGC  84 33
JLK41_RS16665 3525911 .. 3525929 - -13.1  -4.55128   AGCCTGAAATGAAAA             GCCCCGC ACTAG GCGGGGC             TTTTCTTTCAGCGGA 100 45
JLK41_RS16655 3523380 .. 3523394 -  -2.8  -3.29511   GCCAGTCGCGTATAA               CCTTGA CCA TCAACG               ATCCTTAATCTGCAG  44 67
JLK41_RS16650 3522086 .. 3522101 - -11.8  -4.77438   ACCGAGTATGAAAAA              GGCCGC ATTC GCGGCC               TTTTTCGTTTGACGG 100 246
JLK41_RS16635 3519793 .. 3519809 -  -5.8  -3.20723   CCTCGATTAAGCCAA              TACGCC GCACT GGCGCA              TGGCCTGGCGCAGCG  50 0
        bamC 3518586 .. 3518613 - -10.6  -4.86731   TCGTGGCAAACAAAA        CAGGCGAAACCC TTTA GGATTTCGCCCA         TCGATTGGAGGCTGA 100 58
JLK41_RS16625 3517647 .. 3517677 - -19.7  -5.00616   GTCGCTTGTAAAAAA       CAGGCGCCTCCGG TGCTG CCGGTGGCGCCTG       TCTGGGTGGTCAGGC 100 35
JLK41_RS16620 3517433 .. 3517459 - -10.2  -5.46706   ATCGGAAAAGAAAAA         GCCCCGTAAACC ATT AATTTACAGGGC         TTTTCTATATATGGC 100 37
JLK41_RS16610 3515310 .. 3515340 -  -6.8  -4.72863   CTAAACAAATGAAAA       GGGGCTTTTGTATG CTA CAGATACAAGCCCC       TTATGCGCTCAAACA  85 326
JLK41_RS16580 3509784 .. 3509800 -  -2.9  -3.15544   GCCTATGCCGAGCAA              CTGGCCT CAA AAGCCAT              TACATTGATTCAGGA  44 56
        metE 3499458 .. 3499470 -  -3.3  -3.53811   GCGATTCTGGTGAAA                GTCGT TCG ACGGC                GCTGCCACACAAGCG  49 155
JLK41_RS16545 3498401 .. 3498413 -  -3.4  -3.54029   CGCGATCAAGCACAA                TCAG GAGCT CTGA                TCTCGCTACAGGTGG  49 31
JLK41_RS16535 3496494 .. 3496535 -  -5.8  -3.65812   CCTGCTGCAACACAA TGC-CGACC-TCTCCGCCGC CGAG GTGGCCGAGAAGGTCGAGCT GTCGCAGTCACCCTG  57 396
JLK41_RS16525 3492721 .. 3492753 - -15.6   -4.1721   ATTCAGATCGTAAAA     GGCCATCCCCCTCCC GCAC GGGAGGGGG-TGGCA      AGGGGGATGCTTGAA 100 44
JLK41_RS16520 3491498 .. 3491530 -  -2.5  -2.60194   ATCCGTTGAACTAAG      GGGACACGGCCGT ATTCGCA ACGGCCGGGCGGC      ATCTTAGCGACGACC  38 74
JLK41_RS16515 3491268 .. 3491283 -  -2.5  -4.11183   GCCGACCAGAAAGAA              GACGC AGCGAG GCATC               CAGAGACAGCATGCT  57 170
JLK41_RS16510 3490587 .. 3490603 -  -3.5  -3.91911   CCGAGCGCAACGAAA              CCGCTGG CGG CTGGCGG              CTGAAAGTTCTGGTA  56 79
JLK41_RS16505 3489237 .. 3489249 -  -3.3  -3.14931   TGCATGTTCCAGTAA                TGGGC GTA GTCCA                TCTGGTACCAGGGGT  45 130
JLK41_RS16500 3488675 .. 3488689 -  -2.1  -3.87994   ATTGAGTTGGATAAA              GCG-TG GGCA CAGCGC               AAGGGGACTTCAGTT  54 79
JLK41_RS16495 3486418 .. 3486441 - -19.6   -4.1891   CCGGCTGAATAGAAA          GCCCCGCCTG GGTT CAGGCGGGGC           TGGTGGAGGGACTCA 100 38
JLK41_RS16470 NONE
JLK41_RS16465 NONE
JLK41_RS16460 NONE
JLK41_RS16455 NONE
JLK41_RS16450 NONE
JLK41_RS16445 3456517 .. 3456537 - -16.9  -2.72991   GCACATCGTCAACGA            CTGGTGCGC ACA GCGCACCAG            TTTCTCTTTGATCGA  84 47
JLK41_RS16410 3445936 .. 3445959 - -14.6  -2.53995   ATTTAGTCGAACTCA          CTCAGGCGCT TTCC AGCGCCCGAG           CTTGAGTCGTAGCGG  76 3
JLK41_RS16405 3444906 .. 3444919 -  -3.1  -3.44586   ACCAACTCAGCACAA               TCG-GC ATC GCTCGA               AGAAACGCTCGCGAC  49 3
        fhuF 3444066 .. 3444086 -  -3.9  -2.58663   ACCCATGGGGATAAT            GACCAATCC TGC GGACGGATC            GCCGATCAGCTACTT  40 55
JLK41_RS16385 NONE
JLK41_RS16380 3438767 .. 3438790 - -10.2  -2.53409   GAGCAACTGAGTAAT          GGCCAGGTGC ATGA GCGCCTGACC           GCGCAGCTGCCGTTC  56 248
JLK41_RS16355 3435360 .. 3435390 -  -3.2  -3.54029   CCTCACCAACCATAA       TGTTTGCCAAGAGA CGT TCTCTTAGCCCTCA       TCCGACACACGAATG  49 16
        cheR 3434454 .. 3434486 - -13.4  -4.07568   CGCGGGTGCCGAAAA      CGCCAACGGGAGGC ACATG GCCTCCCGTTGCTG      ACATACCCGACCGGC  95 48
        flgB NONE
        flgC 3433369 .. 3433394 -  -9.1  -3.34517   AGTCCCCTTCAAATA         CGT-TACTGACC GAG GGTCAGCACACG         CTGCAGCATCTGCTT  63 2
        flgD 3432687 .. 3432701 -  -3.4  -2.93073   CGGCGGCAATAATTA               CTGGCC GAT GACCTG               CACTTGCGAAAGCGG  42 8
        flgE 3431236 .. 3431256 - -16.9  -3.69354   TTCCAGAACGGCAAA            GCGGCAAGC CAG GCTTGCCGC            TTCATCTCAGGTCAG 100 46
JLK41_RS16325 NONE
        flgG NONE
        flgH NONE
JLK41_RS16310 NONE
        flgJ NONE
        flgK NONE
JLK41_RS16295 3422239 .. 3422249 -  -3.2   -4.2717   ACCATTCGAGCAAAA                 TGCA TGC CGCA                 CTGCAGAAGGATACG  62 140
        rfbF NONE
        rfbG NONE
        rfbH 3419012 .. 3419030 -  -4.5  -2.97925   ACCGCAGAGCACATA            GGC-ACGC ATCA GCGCAGCC             TCCGCACGTAGGTTT  45 15
JLK41_RS16275 NONE
JLK41_RS16270 NONE
JLK41_RS16265 3415021 .. 3415033 -  -5.5  -3.09516   CGCTCCATGATGTAA                TCCGC TAC ACGGA                CAGTCTGAGTCACGT  49 64
JLK41_RS16260 NONE
JLK41_RS16255 3412472 .. 3412501 -  -2.7  -3.16982   CGTATATCAACAAAT       GATCCAGGCCGAA CTCA TTCGCCATGGTCC        GCCACCTTGATCAGA  43 10
JLK41_RS16250 3411353 .. 3411371 -    -3   -4.2123   CAGCCATCGAAGAAA             GTTCGTTC ATT GATCGCAC             CTGAAATTTCCTTGT  60 92
JLK41_RS16245 NONE
JLK41_RS16240 NONE
JLK41_RS16235 3408156 .. 3408179 -  -4.4  -3.38951   CCAGCAATATATGAA          CCCGACGAGG CCGT CCTCCCCCGG           GGGAGCTGCCTTCAA  49 37
JLK41_RS16230 NONE
JLK41_RS16225 NONE
JLK41_RS16220 3400457 .. 3400484 - -14.2  -4.18018   GGTGTTGACTGAAAA        CCGTCGGACC AAGCGAGG GGTCCGACGG         CCCATTTGCGCATCA 100 38
JLK41_RS16215 3398719 .. 3398747 - -18.9  -3.14963   CTCACAATGAGGTAA        CGGGGGAAAGAGC CTG GCCCTTCCCCCCG        TAGTCTAGCGCTTTT  91 45
JLK41_RS16210 3398245 .. 3398282 -  -8.5  -4.57569   GCACCTCGTCAAAAA   TCCGACTGAACGCTACC GATA GCTAGAGTTCAGTCAAA    ATTCATGCCAGGGCT  79 45
        fliD NONE
        fliS 3396322 .. 3396334 -  -3.3  -2.56095   CTGATACCTAAGGTA                TCGGC GCT GGCGA                GAAAAGCTTTAGCCG  40 46
        fliS NONE
JLK41_RS16190 3395361 .. 3395380 - -12.8  -2.75382   GAGTGTAGGGAACGA            CGCGCCAG ATGC CCGGCGCG             ATCCGGCAATTGGCC  69 229
JLK41_RS16185 3393774 .. 3393807 - -13.3  -4.70626   CAATAACTTGAAAAA     TAAAGCCGGGTGCTGT GTC AAAGC-CCCGGCTTTA     TTGGATGAAACGTCC 100 67
JLK41_RS16180 NONE
        fleR 3390853 .. 3390881 -  -8.9  -3.07192   AAGGGTGCCAAGAGA        GCAGCTTCAAGCT TCA AGCTTCAAGCTTC        AAGCAAGAGCAAGAG  60 181
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 3384937 .. 3384964 -  -2.6  -3.48593   GACTCTGCCAGATAA        GGTGGTTCACGT CTCA AGGTGTAGCACC         TGCCCGGCGCCGAAA  47 50
JLK41_RS16140 NONE
JLK41_RS16135 NONE
JLK41_RS16130 NONE
JLK41_RS16125 3381048 .. 3381090 - -24.3  -3.59979   TGCTGTCACCTCAAA TGCAATCGCCCGGGTTGCC TGAAT GGCTACCCAGGCGATTGCA AGTCTAGCGGAGTCA 100 148
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 3378415 .. 3378425 -  -3.2  -3.18023   CCAGCACCAGCAACA                 GACG CAG CATC                 AGGATTTATCCTTCT  45 24
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 3375400 .. 3375449 -  -4.9  -3.86822   GAAGCGTTCCACAAA TGCCGAAGCCGCGT-ACGACGC CGCTTAC GTGTCGCGACGCAGGTCCGGCG GGATGGGCAGATCCG  59 0
        flhA NONE
        flhF 3371861 .. 3371883 -  -2.6  -3.03771   CGAGAGGGTGCAACA          TCGTCGCCG TTCAGC CGGCG-CGC           TGCGCGGGCTGGTGA  41 13
        fleN NONE
JLK41_RS16065 3370143 .. 3370163 -  -4.8  -3.59262   CCGTACAGTCCCAAA           CGTA-TTGC GCTT GCAACTACG            TCCTTTAATCGAGAA  54 70
JLK41_RS16060 NONE
JLK41_RS16055 NONE
JLK41_RS16050 3366629 .. 3366666 -  -5.6  -3.56568   TGACAGTCATAAACA  CTCCTAGACGGCACGGGC TTCG GCCCGTGCCG-C-AAAAC   CATCAGAAACGCCGA  57 28
JLK41_RS16045 NONE
JLK41_RS16040 NONE
        motD 3363869 .. 3363901 -    -4  -3.31144   CGCTCAGGCCGAGAA      TGGCTGTCACCTGC ACGCG GCAGGCGACTGGGA      TTTGACAGGTCACGA  47 35
JLK41_RS16030 NONE
JLK41_RS16025 3362056 .. 3362068 -  -6.2  -3.86015   TAGCCTCGTCAGAAA                CCGC CCAGT GCGG                CGTTCGCGGGTCAGC  62 89
JLK41_RS16020 NONE
JLK41_RS16015 3361108 .. 3361131 -  -2.4  -3.62597   TGGACCTGCTAAGAA          CGCTGCCGACT ATC AGT-GACAGCT          ATTGCGGCTGCCCCG  49 24
JLK41_RS16010 3360325 .. 3360363 - -16.1  -3.57144   GTGCTCAGCGCCAAA  GGCGACGACGAGC-TGGC CGAA GCCATACTCGCCATCGCC   CGCGAATACGAAGTG  86 225
        ccmA NONE
        ccmB NONE
JLK41_RS15985 NONE
        ccmD NONE
        ccmE NONE
JLK41_RS15970 NONE
JLK41_RS15965 NONE
JLK41_RS15960 NONE
        ccmI 3351544 .. 3351585 -  -4.2  -3.00106   CCGAATCCAAACAAT GCCGCCAGCACCAGGCGC TTCATT GCACCTGCCCTTCGCGGC  TGTCGATCAACAGCG  46 3
JLK41_RS15950 3351198 .. 3351215 - -14.1  -5.04601   CGCACAAACGAAAAA             CGGCGCC TGCG GGCGCCG              TTTTCATGTGCGGGG 100 50
JLK41_RS15900 3339085 .. 3339100 -  -7.6  -4.37092   AGGTTCTCCAGAAAA              GCGAAT GGGC ATTCGC               CGCACAGACCGGTGA  77 320
JLK41_RS15895 3338591 .. 3338607 - -10.1  -2.57132   TCGCGCTTCCAGAAT              TCCGGGA ATG CCCCGGA              TGAACAACCTACTGA  60 51
JLK41_RS15890 3337581 .. 3337591 -  -2.4  -3.72576   GCCGCCCGCAGGAAA                 TCCG GGG CGGC                 TGCCTGGTCCCTAGA  52 36
        moaA NONE
JLK41_RS15875 3334186 .. 3334200 -    -7  -2.52516   GCCTTCATCAGCAAC               GTCGGC ATC GCCGCC               TTCGTCGATACCCTG  47 360
        uraH 3325699 .. 3325717 -  -8.8  -5.81412   TGCAGGCAAAAAAAA             GCCCGC AGTGTGA GCGGGC             GTAAGGACTCAAACG 100 91
JLK41_RS15825 3322483 .. 3322506 - -14.6  -5.24129   CCGCCCGACAAAAAA          GCCCCGATGC GCGA ACATCGGGGC           TTTTTTCGTATCCAG 100 50
JLK41_RS15795 NONE
         smc 3309869 .. 3309886 -  -4.1  -5.40072   TTCTGGTGAAAAAAA             GATCCAA TCGA TCGGACC              CTGATTCGACTATAA  85 142
        zipA 3308957 .. 3308990 -   -14  -5.64873   GGCAAGAACAAAAAA     GCCCCAAGC-CAAGC GCTTG GCTTGAGCTTGAGGC     TCGCAGCTTGCCGCT 100 46
        ligA 3306428 .. 3306460 - -19.3  -5.14563   TGGTGGATGAAAAAA      GCGTCATCCACCCTA CCG TAGGGTGGATCACGC      TTCACCGATCCACCG 100 110
        prmB 3301863 .. 3301899 -  -7.3  -3.14931   TTCAGCCGCGATCAA   CGGT-GCACGCCATGC CGATAT GCATGGCGAACAACCA    CGCCCATCACGCCCC  54 32
        aroC 3298523 .. 3298539 -  -2.9  -2.90212   CCAGTACGGCAGAGA              CGCCG TCATGAG CGGCA              GGGTTCAAGCGGCAC  40 91
JLK41_RS15730 NONE
JLK41_RS15725 NONE
JLK41_RS15720 NONE
JLK41_RS15700 NONE
JLK41_RS15695 3291357 .. 3291394 -    -9  -3.33815   AGTCTTTGTAACGAA   GCCGGCGACCAGC-GGC AATTG GCCAGCCGGGCGCCCAC   GCCCCTCTCACAGCC  63 33
JLK41_RS15690 3290711 .. 3290763 -  -8.3  -3.06183   TTCAGCGGCAGGTAA GCCGCGCCCTCCGCCCCTCTTCCCC GGC AGGAAAGAGGAGCAGAACACGCCAG ACCACAGGAAAGGCG  56 43
JLK41_RS15685 3289793 .. 3289803 -  -6.8  -2.71447   AGGCAGGAGAGACGA                 CACC AGG GGTG                 CATTCGATCAGATGC  48 139
        rlmM 3280353 .. 3280379 - -11.4   -2.7185   AGGACTCCGGAACGA         CGCGGGAGTCCG GGC CGGGCCCCTGCG         GCCCGAGCCCGGTTC  65 47
        tusA 3279901 .. 3279918 - -10.5  -3.67588   CAAACGGGATGGAAA             GGCGCCG GGCG CGACGCC              GAATCCTAGGCTGGC  73 40
        pdxB 3276115 .. 3276137 -    -7  -4.91459   TAATACCCATAAAAA           TAAGGCGC ATGGATA GCGCCTCA           TTGCCTGGCCGCAGC  88 42
JLK41_RS15605 NONE
JLK41_RS15600 3275066 .. 3275110 -  -6.4  -3.56092   CGAGGAGCTGGCAAA CATGCTCAACACCTGGCTGCC GGAG AGC-GTCAGCCGTTGAGCCTG GCCAGCAGCTGGTCC  58 10
JLK41_RS15590 NONE
JLK41_RS15585 3271249 .. 3271306 - -11.3  -2.52464   CCGTTGCGCAAGGTA CACCG-GTCGTGGGCA-C-GCAGCCGCGC AGGT GCGCGGCCGCTGGTGCCC-CGTCACGGCT CAGCAGTCGCTGGCT  64 25
        queF 3270309 .. 3270326 - -12.7  -4.46212   GCCTCCAGCAGAAAA             TGCCGCC CAAG GGCGGCA              TTTTTCATGGCATCA 100 38
JLK41_RS15560 3267848 .. 3267864 - -15.1  -4.72272   TGCCCTTACGAAAAA              GGCGGCC CAG GGCCGCC              TTTTTTGCATCCGCC 100 48
JLK41_RS15550 NONE
JLK41_RS15545 3265593 .. 3265619 - -23.8  -5.26875   GCCTGAATGAAAAAA         GGGGGCGTCAGC CAC GCTGACGCCCCC         CTTTCGATTACGTCC 100 45
JLK41_RS15535 3264107 .. 3264117 -  -6.8  -3.65522   GACTGACCTGAACAA                 GGTC CAG GACC                 CGCTGGGCCTGCTCG  61 42
JLK41_RS15510 NONE
JLK41_RS15505 3257111 .. 3257157 -  -4.3  -3.73107   GCAGGAAATTGCAAA CGTGGCGT-GACGCAGGCCGCCC GCC GAGCGGACT-CGCCGATGCCCCA GGCAGGGCATCGGCG  57 90
JLK41_RS15500 NONE
JLK41_RS15495 3254762 .. 3254784 - -11.3  -2.75992   CGGCAGGCAACACCA          GCGCGGCCAG CACG CTGGCCG-GC           ACATAGGCGAGCGCC  65 156
JLK41_RS15480 3252312 .. 3252322 -  -2.4  -3.28791   ACGCCGCCGTCACAA                 GCAC CTA GGGC                 TCCAGAGCGCTCGTG  44 19
        pqqF 3249732 .. 3249751 -  -8.5  -3.61178   CGCACGCACGGGAAA            CGCCCGG GGCTCG CCGAGCG             GCCACGGGTTCGATA  64 65
JLK41_RS15470 3248247 .. 3248278 - -17.3  -4.18401   CCACAGACGGCAAAA      GGCCGGGC-GAGGG TCGCC CCCCCTGCCCGGCC      TCGAACGCTGCGTGT 100 40
JLK41_RS15465 NONE
JLK41_RS15460 3244240 .. 3244258 - -12.4  -2.72144   TCACGCCCTGTAAAT             CTGCCCGC TGA GCAGGCAG             CGCGCTACGGATATG  69 49
JLK41_RS15420 NONE
JLK41_RS15415 NONE
JLK41_RS15410 3235587 .. 3235609 -  -4.6  -2.78384   CCGCGTTGCAGCAGA           CGAGGCCTGC TGA GCCTGCCGCG           GAATCTACACCGGAT  43 93
JLK41_RS15405 3234545 .. 3234585 -  -7.6  -3.06796   GTCCACCCTACGCAA TGGGTAG-GGTGGATGACG CTCT CTTCATCCACCGCTGGCCA  GGCTAGTTCCAGGCG  56 28
        pedF NONE
JLK41_RS15385 NONE
JLK41_RS15380 3229044 .. 3229062 -  -5.9  -2.78384   GCCCCCTGGAGGACA             CCTCAGG AACCA CCTGCGG             TTCTGGACGTGCCCC  46 73
JLK41_RS15375 3227807 .. 3227823 -  -5.8  -3.53012   CGGGTCGCGGCTAAA              GCCCCT CCCAC AGAGGC              AACCTGTGGCCCTGG  55 297
JLK41_RS15365 3224943 .. 3224975 - -23.5  -3.53012   GCGCGCCCCCGGAAA      CGCCGATGGCCGGAC AGG GTCCGGCCATCGGCT      TCGAGTTGTCAGGAA 100 114
JLK41_RS15360 3222941 .. 3222956 - -11.8  -5.24129   GGCGCGCAGAAAAAA              CGCGGC CGAA GCCGCG               TTGCGATAAGGATCT 100 209
        pqqA NONE
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
JLK41_RS15330 NONE
JLK41_RS15325 NONE
JLK41_RS15320 3214738 .. 3214778 -  -3.2  -2.62983   CTCAGGTTCAGACCA CCAGTCCGCCGCCGCTCAGG TTT CCTG--CAGCAGCTGGCTGA GCACCGCGCGCAGCT  40 0
JLK41_RS15315 NONE
JLK41_RS15310 3213297 .. 3213314 - -14.1   -4.2828   GCCCATCGACGAAAA             CGGCGCC CGAG GGCGCCG              TTTTCGTTTGTCTCA 100 38
JLK41_RS15300 3211702 .. 3211720 -   -16   -5.4505   CCGGGCAATAAAAAA             GGGGTCGC TTG GCGACCCC             TTTTTATCGATTTGG 100 38
        thrS NONE
        infC 3208951 .. 3208964 -  -5.3  -3.73647   CGCATTCATTAACAA               CTGAT AACC ATCAG                GCCTGCCAGTGCCCG  60 46
        rpmI 3208739 .. 3208751 -  -9.1  -2.64199   GACCGATTAACGAAC                GCGCA GCA TGCGC                TCGACTTTTGCGACG  56 4
        rplT 3208269 .. 3208299 - -15.6  -3.88766   ACTCCAGATACGAAA       TAGGGGAAGAGC TGTTAAG GCTCTTCCCCTA       TCTTTGACGTTGCCA  95 70
        pheS NONE
        pheT NONE
        ihfA NONE
JLK41_RS15260 NONE
JLK41_RS15255 3203972 .. 3203995 - -13.2  -4.98531   CCCCGAAACGAAAAA          GGCCAGCTCA TCTC TGAACTGGCC           TAAGTCGTGGAGTTA 100 43
JLK41_RS15245 NONE
JLK41_RS15240 NONE
JLK41_RS15235 NONE
JLK41_RS15230 3195765 .. 3195789 -  -9.4  -4.77757   GCTCAAAAACGAAAA         CAGCCAG-TGA TTGC TCAACTGGCTG          CTCCCATTGGAGTCG 100 243
JLK41_RS15215 3192242 .. 3192295 -  -2.3  -3.85698   TGCTTTTTTCAGAAA CTCGGCGGAGCTTCAGGGCTGCGG ACCGGCG CCG-AGCCCCGAAACGCTACTGAC TAGCCCCGGCTCAAC  54 25
JLK41_RS15210 NONE
        recC NONE
        recB 3183880 .. 3183893 -  -2.3  -3.01712   CCCGCGTCTGCAATA               CCGCA CTCA TGCCG                GCACCTCCCCGGCAT  41 18
        recD 3181391 .. 3181408 -  -2.6  -4.46233   GCAATCGCAAATAAA             CTCTCG AATTCA CGAGTG              TTACTTGTGATGCTG  66 506
JLK41_RS15190 3179708 .. 3179718 -  -3.2  -2.92389   CAACTGAGCTACAGA                 CCTA TCA CAGG                 GTCGCCGCGTTACAG  42 106
JLK41_RS15185 NONE
JLK41_RS15180 3179466 .. 3179517 -  -3.9  -4.09685   TTGTACCGGTCAAAA GACCAGAAATCAGCACTCAACAGGT CATC ACCTG--AAGCGCTCATTTCTGAAC TCTCTACGATCATGC  59 46
JLK41_RS15175 NONE
         rrf 3176105 .. 3176138 - -20.5  -3.90744   CTGCCGCGCAAAGAA     GAAACCCCAGACCTC GTTA GAGATCTGGGGTTTC      GTATAGGAGCTTGAC 100 34
JLK41_RS15155 NONE
JLK41_RS15150 NONE
JLK41_RS15145 NONE
JLK41_RS15140 3171204 .. 3171229 -  -8.9  -3.16881   CATCTATGCCAGCAA         GGCCGAACTGG CGCA CAAGCCCGGCC          TGCTGGTGGGCGTCT  56 323
JLK41_RS15125 3167126 .. 3167150 -  -4.3  -2.66912   AGTTAAGCGACAGGA         TGCGCGCAGA ACTTAA TCCG-GCGCA          GGTGCAGACCCTTAC  43 37
JLK41_RS15120 3165352 .. 3165371 -  -8.6  -2.52795   AATCGCTGGAACCTA            CCGC-TCTG ATT CAGATGCGG            AACTGACGCACCAGC  52 16
JLK41_RS15110 3163689 .. 3163718 - -17.3  -4.07568   GCCTGCCCCGGAAAA       TGAAAAAGCCCGC GAAA GCGGGCTCTTTCA        TTGGCGCTGCCGACT 100 40
JLK41_RS15090 3159000 .. 3159016 -  -6.5  -3.03124   CGCCATCCTCCAACA              CGAAGTC GAG GTCTTCG              AGTCGCGCGTACTCT  52 359
JLK41_RS15075 NONE
JLK41_RS15070 NONE
JLK41_RS15065 NONE
JLK41_RS15060 3152367 .. 3152383 -  -6.5  -3.01924   CAGCGTCGCCGAACA              GCTGCAG AGC CTGGAGC              GAGCCTGCCGCGAGC  49 485
JLK41_RS15050 3149192 .. 3149205 -  -8.1  -2.78384   CCGCCCTCCACGACA               GGCTG CCTC CAGCC                AAGATCGAACGCTCA  53 70
JLK41_RS15045 3146718 .. 3146755 - -12.7  -3.46068   TTGGCAATCCAAATA   CGGCAAGCCTGAGCCGGT ATA ACCGACTCGGGCT-GACG   ACTTCCGGTTCGCTC  79 285
JLK41_RS15000 NONE
JLK41_RS14995 3132038 .. 3132068 -  -6.9  -2.71011   ACTTGGGTGTAAGGA       TGAAAGCAGGAGC TATTT GCTACCACTTTCA       TGCATCAACAGCTCA  50 7
        ytfE 3122853 .. 3122882 -  -4.3  -3.61715   GATGGCTGCGAAGAA       TC-TGGTGATGTAC GCG GTGCAACACCATGA       GAGGCATCCCTGTGG  54 250
JLK41_RS14935 NONE
JLK41_RS14930 3121890 .. 3121919 - -13.6  -3.13403   CGGCGCGCACCAACA       GCCGC-GCCCGGA TGTGG TCCGGGCTACGGC       TTGTTGGTTGAGGAG  78 49
JLK41_RS14880 3111843 .. 3111879 -  -3.5  -3.05463   ACGGCTCGGACTGAA    CGCGCAGGCCCGGCA CCAAGAC TGGCGGGCCTCAGTG    CGCCTGGTGCAGGTG  43 73
        glnT 3109617 .. 3109646 - -12.1  -3.02263   AGATGTCGTGCAACA       CCTCGAACCGCTC TTGC GTGCGGCTCGAAG        CCCGTGGCTTGCAGC  72 42
JLK41_RS14865 3108542 .. 3108557 -  -3.2  -3.28712   GGGTGCGCGGGAGAA              CCGCAG CGAG CTACGA               GCCGGTACCAGGGGC  47 103
JLK41_RS14860 NONE
JLK41_RS14855 3106386 .. 3106412 - -23.8  -5.08824   GCGCCACGCAAAAAA         GGGCCGCAACGC CTG GCGTTGCGGCCC         CTCGGATGGACGCTC 100 47
JLK41_RS14845 NONE
JLK41_RS14840 NONE
JLK41_RS14835 3103041 .. 3103053 -  -3.3  -3.06915   ACGCAGGGGATGGAA                TCAGG CGG CCTGG                GCCTGCGGGTCGAAC  43 13
JLK41_RS14830 NONE
JLK41_RS14825 3101391 .. 3101419 -  -2.4  -3.02144   GCACGTGTTGCAACA       CCTGA-ACGCGCA TGGC TGAACGCCTCAGG        CCAGTGGTGCGGGGC  41 21
JLK41_RS14820 3100639 .. 3100657 -  -7.4  -3.28791   ATGGGGCCTGGACAA             CTACCTGG AAA CCAAGCAG             ATCACCCGCTACGAA  56 79
JLK41_RS14785 NONE
JLK41_RS14780 NONE
JLK41_RS14775 NONE
JLK41_RS14770 3088762 .. 3088775 -  -2.3  -2.67143   ATATCCATCAGACCA               GCTCC TCCT GCAGC                AGCGGCCGACGCCGC  38 4
JLK41_RS14765 3087999 .. 3088010 -  -7.2  -2.83747   CAAGGTCGACAACCA                CGGC CAGC GCCG                 CATCTGCCTGCAGCG  50 440
JLK41_RS14725 3082874 .. 3082896 -  -6.2  -3.62046   GGAGCTGTCGAACAA           CGGCATGCTG GTG CAGTACGCCA           AGGCCGGTACTCCGG  56 261
JLK41_RS14710 3081413 .. 3081438 -  -5.3  -3.14344   GAGGCGCTCGATCAA         CTGCCGCGCAC GCGG GTGCATGTCAG          CCCTTCAGCGCAGTA  50 22
JLK41_RS14705 NONE
JLK41_RS14700 NONE
JLK41_RS14695 NONE
JLK41_RS14690 3078573 .. 3078587 -  -4.9  -3.30124   CCGCACGCTTCACAA               GGCGC GCGCG GCACC               TGAATGACGGCCGAT  49 50
JLK41_RS14685 3077559 .. 3077578 - -10.7   -4.7871   AAGCACGACGAAAAA            GGCCGAC ATCGAA GTCGGCC             CTGGTCCCTGCCGGT 100 46
JLK41_RS14680 3076808 .. 3076825 -  -3.3  -3.70773   TCCGACAGGTAACAA             CCGGGTA CTAC TCCCCGA              CGCGATCAGATACCG  54 31
JLK41_RS14675 NONE
JLK41_RS14670 3075716 .. 3075733 -  -4.7  -3.53012   GTCCCGCCCGGCAAA             CCGCCGA CACA CCCGCGG              AAGCGCATCCGAACT  52 59
JLK41_RS14630 NONE
JLK41_RS14625 3067470 .. 3067492 - -13.4  -3.47941   CAGCAACTACTACAA           CCTGGGCGAC TGG GTCGCGCAGG           TGGGTTGAGCGCCGC  86 52
JLK41_RS14615 3066410 .. 3066420 -  -6.8  -3.69395   TTGATCATGCAACAA                 GCTC CTT GAGC                 CAGAACGACATGGGC  60 4
JLK41_RS14610 NONE
JLK41_RS14605 3064311 .. 3064323 -  -9.1  -2.53263   TCGAGGGGCAATCGA                TCGGC GCC GCCGA                GGTGCATGCCGCCTA  54 105
JLK41_RS14595 3062659 .. 3062673 -  -5.6  -3.55563   AGCCGATCTGGCAAA               GGCCGC TGA ACGACC               GGCGGTACGGCTGCG  55 137
        dsdA 3061203 .. 3061227 - -17.2  -2.73542   TGCAAGCTGCAAGGA          GAAGCCCGGC CCCGT GCCGGGCTTC          TGCGTTTTCAGGCGT  84 33
JLK41_RS14580 NONE
JLK41_RS14575 NONE
JLK41_RS14570 3056434 .. 3056451 -  -8.3  -2.72344   CGCCAGGGGCAAGCA             GGGCCGG TGCT CCGGCCA              GGGGCCTCAGGCGAA  53 32
JLK41_RS14565 3055854 .. 3055872 -   -16  -3.66654   CAGCTGAACCGGAAA             GGCCGCTC ATC GAGCGGCC             TTTTTCATGCCTGCT  93 30
JLK41_RS14545 3051918 .. 3051930 -  -3.3  -3.73914   AGCAGCGATCAACAA                CAAGC GGC GCATG                GCCATTCTCCAGAGG  54 98
JLK41_RS14540 NONE
JLK41_RS14535 3051061 .. 3051073 -  -9.1  -2.89742   CGCAATCTGCAGAGA                GCACC TGC GGTGC                ACTGAAACGAGTGAT  59 43
JLK41_RS14525 3048786 .. 3048804 -  -4.4   -3.7941   CATCGCCCAGAAGAA             CCTGCGGC AGA GCCCCATG             CACGCACTGCCGCTG  58 373
JLK41_RS14510 3046790 .. 3046817 - -11.3  -3.07816   CGGCCACGTACGCAA        GGACACCCAGG GCTATG CCTGGGTACCC         GCCGAATTCAGCCCG  62 476
JLK41_RS14495 3045051 .. 3045063 -  -9.1  -3.20723   CCTGCAGCAAGCCAA                GGCCA GCC TGGCC                GAGGGCGTGCTAGGC  59 120
        bglX 3037684 .. 3037709 -  -3.1  -3.05844   GCCTCCAGGGCAACA         CGTACTGACAG GCAG CGGCCAGCCCG          GTGGCGACCGCTACG  43 205
JLK41_RS14470 NONE
        mdoH 3033524 .. 3033549 - -17.7  -2.60075   CTGGCTGTAAGCAAG         TGTGTCGCAGG CGAC CCTGCGACACA          GGGTCGATTGCTCAG  85 37
JLK41_RS14460 3032596 .. 3032609 -  -9.5   -5.4833   GCAGGCAACAAAAAA               CCCGC CGAA GCGGG                TTTCTTCCCAACCAT 100 192
JLK41_RS14440 3026904 .. 3026914 -  -4.6  -3.05343   GCGAGAGGGGGAACA                 CACC CTC GGCG                 CCAGCTTCGACTTTC  45 474
         pap 3023355 .. 3023375 -  -6.7  -2.87931   TTTAGCCGCGATAGA            GCCTGAGCC TGC GGCGAAGGC            CGCCCGATCCCCTCA  51 422
JLK41_RS14425 3021510 .. 3021520 -  -8.2  -4.67552   GGCAGGAAAAAATAA                 GCCG ACG CGGC                 AGGCGCCGAAGGCAC  81 96
JLK41_RS14420 3020800 .. 3020824 -  -3.4  -3.88498   CCGGCACAGAGTAAA          GCATGCCGCC GCCGT GGCGGGACTC          AGCGCCGGCTCAGGG  56 24
JLK41_RS14415 NONE
JLK41_RS14410 NONE
JLK41_RS14405 NONE
JLK41_RS14400 3015577 .. 3015599 -  -7.6  -2.70932   CCGTGGCTTCAACGA           GCGCTTCGAC GCG GCCAGAGCGC           AGGCCCAGCGCGAGC  53 508
JLK41_RS14365 3004860 .. 3004872 -  -6.9  -3.56325   TGGTGACAACCAGAA                CGAGG AGC CCCCG                CATGACCCAGCAATC  60 463
JLK41_RS14345 3002423 .. 3002454 -    -5  -2.78891   AGGGGAAGGGAATGA      CGGCGGCTCAGT CCTTTTTC ACCGGGCCGGCG       AGGAACTCGGCGTCC  43 1
JLK41_RS14340 NONE
JLK41_RS14335 NONE
JLK41_RS14330 2999808 .. 2999850 -  -4.1  -3.41051   CTACGGCCAGGACAA CGGCGCCACCCGCATCG-TGC CCG GCAGCCAT-CGGATGCAGCCG GGAGCGCCGCCATTC  49 318
JLK41_RS14320 2998566 .. 2998590 - -10.7  -3.58522   ACGATCAGGCCGAAA          CCGATCGCCTG TGG CAGGCGATCAT          CGACAACGGCGGTCA  70 231
JLK41_RS14305 2996929 .. 2996944 -  -6.1  -3.30243   ACGCACGCGCTACAA              CAGGG CTACTC CCCTG               CTTGCCGGCCCTTCG  52 129
JLK41_RS14270 2990618 .. 2990647 -  -9.9  -3.14051   GGATGCTGACCAATA       CCCAGTCCGCTGG TACC CCAGGGGACAAGG        TTCCTAGTCAGTCGG  65 29
JLK41_RS14265 2990021 .. 2990038 - -11.3  -3.17763   GCCATATGGCAGGAA             CTCCAGC GGGC GCTGGAG              AGCTCGACTTGAGTC  69 80
JLK41_RS14255 2988807 .. 2988834 - -11.3  -3.53091   ACGCCTGGCTGGAAA        CGAAGCGGTGG TAGCCC CCATCGCTTCG         TCCTGGGTCAGCAGC  74 134
JLK41_RS14250 2988157 .. 2988172 -  -5.4  -4.12532   TTTTCGATATATAAA              CGCAAA AAGA TTCGCG               AAATTTCCTGCTCTC  65 109
JLK41_RS14245 NONE
JLK41_RS14240 2986726 .. 2986736 -  -4.6  -3.43151   TGAAGCAGGAAGCAA                 CCGA CTG CCGG                 ATCGAGGCGCGACCA  52 48
        pdxY 2985615 .. 2985639 - -12.1  -3.87994   ATCCATCCGTAGAAA          CGGTCACGGCT TCG AGGCGCGACCG          AAAACAGGGCCAGAT  86 88
JLK41_RS14230 2984879 .. 2984899 -  -5.3  -3.14132   CCTGGTCGTGACCAA            GGCCTGTCG CAT CGACACGCT            GCCTGCCGTGGACTT  49 373
        nfsB 2974127 .. 2974141 - -11.4  -2.77895   TCCATCGTTAACAAC               GGCTGC AGC GCAGCC               CAGATGGAGGTGTGC  65 471
JLK41_RS14165 2973001 .. 2973029 -  -7.6  -3.50572   AGGCACTGCAGAGAA        TGATCGTTCT CAGCAAGGT AGAACGATCA        TTCTCTGCGGTCAAG  62 92
JLK41_RS14160 NONE
JLK41_RS14155 2971873 .. 2971892 -  -2.8  -3.08133   CATCGACGCATTCAA            GCA-GCAAG TCC CGTGCCTGC            GAGCCGTTCAGAGCC  41 33
JLK41_RS14150 2970840 .. 2970862 -    -9  -3.63515   GGTGATTTTCAAGAA           GGCCCTGCGC GAG GTGCACGGCC           CGGTGAAGACCCAGT  68 86
JLK41_RS14140 2969080 .. 2969094 -    -7  -3.87373   TACATCTGGCACAAA               TCGGCG GCG CGCCGG               CACGAGCTGCGCATG  64 199
JLK41_RS14095 2956555 .. 2956569 -  -2.7  -2.62184   CGCCCCGCTACAGCA               CCCGC AGCAA GGGGG               CGAGCCATCATTTGC  38 33
JLK41_RS14090 NONE
JLK41_RS14085 NONE
JLK41_RS14080 2952816 .. 2952861 -  -5.3  -3.61654   TACACCGAGCTGAAA TCGGTGCTGATCAAGCTGTGAC ATG GTC-CGGCCCGATCAGGGCCGG TAGCCCTGCTGCAGC  57 16
        peaA NONE
        peaB NONE
        qhpC NONE
        peaD 2946346 .. 2946376 - -10.5  -2.82516   CTGTCGATTATCACA      GCGGAAGGTCGCCT GGGT ATGCGACCTTC-GC       CACTGCGAGCAACCT  61 40
JLK41_RS14050 NONE
JLK41_RS14045 NONE
JLK41_RS14040 NONE
JLK41_RS14035 NONE
JLK41_RS14030 NONE
JLK41_RS14025 2938317 .. 2938329 -  -6.9  -3.25475   TCGAAGACAGCAACA                GCGCC AGG AGCGC                GCCGAGCTACGCGCT  54 323
JLK41_RS14015 2935078 .. 2935096 -  -2.3  -2.90639   GGAGGAAAGAAACAC             TGCGACA GTCAT CGGCGCA             TCCTCGTTGGGCACT  40 68
JLK41_RS14010 2933785 .. 2933802 -  -5.5  -3.90112   TTGTTGTGAATGAAA             CCGGC GTGCCAGT GCCGG              TGGGTCAACTCAGCG  62 35
JLK41_RS14005 2932636 .. 2932648 -  -6.9  -4.24342   CTGCCGATGAATAAA                GCGCG GGA CACGC                CGCCCGGGGCAACGC  71 118
JLK41_RS14000 2931454 .. 2931473 - -12.8  -3.30441   CAGCAGCGCTGACAA            GCGCGCCG CCAT CGACGCGC             TGGCAACGGAACGCT  71 114
JLK41_RS13985 2928617 .. 2928662 -  -8.2  -2.52896   CTATCCGTGAATCGA CGGCGCGCGACCGGC-GCCCCTG CCG CAGGGGCGGTCGG-CG-GCCTCG GATAACGAAGAGTCG  52 44
JLK41_RS13965 2924219 .. 2924254 -  -9.6  -4.12188   GCACGAGCCGGAAAA    GCCTCGGCCCGCACTCG GTT CAGGCGTGGGCC-AGGC    TCACAGCAGTGGCTC  76 26
JLK41_RS13960 2923811 .. 2923821 -  -5.4  -3.34501   AGAGAAGCGCGACAA                 CATC CGG GATG                 TCCTTGAAGAGTTGA  52 88
JLK41_RS13955 2922816 .. 2922841 - -16.1  -4.43477   CGCAGGCAATGAAAA         GCCCGCCGGCA CGAA TGCGGGCGGGC          TCGGTCAGCAACGAA 100 41
JLK41_RS13950 2921439 .. 2921462 - -19.6  -3.53012   CTCGGTTTTTCGAAA          GCCGGCCCAG TTCA CTGGGCCGGC           TTTTTTATGGTTCAT 100 37
JLK41_RS13940 2919526 .. 2919537 -  -5.8  -2.90571   AACCCGCCAATCAGA                GGCT CAGC AGCC                 CGATGCAGAGCAGCG  48 9
JLK41_RS13935 2919070 .. 2919088 - -17.4  -4.46615   CAGCAGTAACGAAAA             CGCCGGGC AAT GCCCGGCG             TTTTGCTATCGACGC 100 48
JLK41_RS13920 NONE
JLK41_RS13915 NONE
JLK41_RS13910 2915073 .. 2915088 - -10.4  -3.12847   AATGGCTATATGCAA              GGTGGC AGCG GCCACC               AGATTCAAGGCTGCG  65 30
JLK41_RS13905 2914385 .. 2914403 -  -6.6  -3.24747   CCCTCAGAGCAGTAA             GGCAGGCC AGC AGCCTGTC             AACGCCTTATATAAC  54 93
        cysB 2913343 .. 2913374 - -23.2  -3.61178   GGCAGGTAGCTGAAA      CGAAACATGGCGCC CCAG GGCGCCATGTTTCG       TTTGCATCGCAGGCT 100 40
        thrH 2911859 .. 2911887 -   -19  -5.15167   GAGCAGCAAGAAAAA        CGCCGCGATTTC TCACG GAAATCGCGGCG        TTTTCAAGACAGCAG 100 49
JLK41_RS13880 NONE
JLK41_RS13875 2904681 .. 2904693 -  -4.7  -3.63627   TCTCCACAGTTCAAA                TGGGG GGG CCCCG                GGCTCTGCCGGTGAC  54 224
JLK41_RS13870 2904180 .. 2904214 - -19.3  -2.99449   CTGCATACAACGAGA     CAGGAGCCCGGCCGC GAACA GCGGCAGAGCTCCTG     CGGATCAGCTCAAGC  90 46
JLK41_RS13865 NONE
JLK41_RS13860 NONE
JLK41_RS13855 NONE
JLK41_RS13850 2899238 .. 2899260 -  -6.9  -3.14564   GGATGGCTTCATGAA           GCTCGCCGC CGGCT GCTACGAGC           TCTGCGGCCTGGGCT  52 347
JLK41_RS13830 NONE
        prpB NONE
        prpC NONE
        acnD 2890566 .. 2890624 - -19.8  -3.34716   GCAGTCCTGAAAAAG TGGCCCGGATGCAATCCGGGGCAAG CAGATTTGGT CATGC-CCGGATTGCATCCGGGCTA CGTGCCAGACGCCGG  95 112
        prpF 2889042 .. 2889058 -  -3.6  -3.06133   CAAGGTCTGACGCAA              CCCAGG CGCAC CCTGTG              GCTGGCGACGCGCCA  44 326
        ppsA 2885227 .. 2885245 - -13.1  -5.79588   TGAAAAGCAAAAAAA             GGGCGGG ATCAA CCCGCCC             TTCTTCGGTCGATCG 100 47
JLK41_RS13790 2883897 .. 2883911 -  -2.7  -3.45386   ACATTGGATAAGCAA               GGGCG GCTGG CGCCG               GGGTCACCTTCATTG  47 184
        rraA NONE
JLK41_RS13780 2882388 .. 2882406 -  -2.3  -2.70528   ATGAGTCACACATCA            CAGCCAGC GCCA GC-GGCGG             AAAAGCAACAACTGC  39 4
JLK41_RS13775 NONE
JLK41_RS13770 2881205 .. 2881234 -  -9.3  -4.30576   CGGTCAGGACGAAAA       GTGCCCGAC-AGGT CAC ACCTTGCCGGGCAG       CTACATAAAATAACA  82 49
        sigX 2880589 .. 2880606 -  -8.5   -2.6296   GAAAGCTGAACTAAG             TTTCGGA AGTT TCCGAAA              ATTTATCCCGCAACC  52 3
JLK41_RS13760 2879454 .. 2879482 - -12.6  -4.83615   GAGCGCGCAGAAAAA       GA-AAAACCCGGC CGAA GCCGGGTTTTCTC        AGAGCGCCAGATGCA 100 41
JLK41_RS13710 2868269 .. 2868303 - -17.3  -4.09864   ACTCATGCTGCAAAA     GAAAACGCCGCGACT TCTAT AGTCGCGGCGTTTTT     TTGTGCCCTGATCGA 100 51
JLK41_RS13700 NONE
JLK41_RS13695 2866923 .. 2866961 - -21.3  -4.18303   AGCAGAAAGCAGAAA  GCAAAAGCCCCTGAGAGA CTGC TCTCTCAGGGGCTTT-GC   GAAAGTGGCGGTGAA 100 31
        earP NONE
         efp 2864614 .. 2864631 -  -9.8  -5.35459   ACAGACCATAAAAAA             CCCGGC GCGAAG GCCGGG              TTTTCTGGTGACGCT 100 46
JLK41_RS13670 2862699 .. 2862726 -    -9  -2.69964   TGCGCAACGAGAGCA        GCCAGTCCCCCG TCAC CGAGTGCCTGGC         CGACCACATCGTCGA  55 51
JLK41_RS13660 NONE
JLK41_RS13655 NONE
JLK41_RS13650 2860142 .. 2860179 -  -4.7  -2.94622   AGAGAGAGTGAGAGA   GTCATGACGCGCCAGCCT ATC AGGCCGGCGCCGCG-AAC   GCATGGCGGAAGGTG  45 7
JLK41_RS13645 2858770 .. 2858783 -  -5.2   -4.1552   GATCTGCTGAAGAAA               CGCG GTATTG CGCG                TGAAGGCCTGGCCAC  64 198
JLK41_RS13605 2850005 .. 2850017 -  -3.3  -4.17657   CACTATACCGGAAAA                TCCTG ACC CAGGT                GCTGGTTTTTGCGCT  62 71
JLK41_RS13600 2848027 .. 2848053 - -19.5  -4.65153   GTACACAAACGAAAA         CGCCGCATCCC GGAAT GGGATGCGGCG         TTTCATGGCGCTCGA 100 66
JLK41_RS13580 2843705 .. 2843728 -  -3.7  -3.64487   GCAGAGCGGCAAGAA          CCGCAGCCG CGACTT CAGCCGTGG           CAAGCCCGGCCACTT  54 129
JLK41_RS13570 2842416 .. 2842428 -  -3.3  -2.56596   TCCGTCATCAATCGA                TGGCC CAA GGCTA                GAGGCGTCGAACGGT  40 279
JLK41_RS13565 NONE
JLK41_RS13560 2840596 .. 2840618 -  -2.7  -5.09895   CAGTCACTGAAAAAA          GCGCCGGATC AGAA GATC-AGCAC           ATAGGTCTTGCGCAG  78 11
JLK41_RS13555 2839422 .. 2839449 - -22.8  -4.39287   CGAAGCACAGGAAAA        CGCCGCGAGCCT GCAG AGGCTCGCGGCG         TTTGTGCTATCCAGG 100 52
JLK41_RS13535 2833144 .. 2833154 -  -8.2  -3.16191   CTACACCTCGATCAA                 CGCG CCT CGCG                 GACTGAACGAACGCA  56 256
JLK41_RS13525 2831496 .. 2831510 -  -4.2  -3.37464   CGAGCAACTGGACAA               CGAAGC GCT GATTCG               CGAGCAGTACAACGG  49 429
JLK41_RS13515 2825635 .. 2825679 - -13.5  -3.02947   TACTCAGGATAGAGA CTGCCCCCTCGCCCGCCCGC ATCCCA GCGAGCGG-CGAGAGGTCGG CATGGCGTCAGAGGT  76 33
        nfuA 2824923 .. 2824950 - -21.4   -2.9162   CAAGGCCTGAAACGA        CGAAGGGGCGAC TCTG GTCGCCCCTTCG         CTACGCCTGACGCGG 100 43
JLK41_RS13485 2819550 .. 2819562 -  -2.6  -3.45571   CCGGCGAAACAGTAA                CGCC CCCTC AGCG                CAGTCGATGTTTGTG  47 20
JLK41_RS13480 2818939 .. 2818964 -    -6  -3.40403   CTGGCTGCAGGACAA         CGGGCAGCGC TACGTC GCCCTGTCCG          GCGACTGGGCCGAGC  55 82
JLK41_RS13455 NONE
JLK41_RS13450 2813490 .. 2813500 -  -4.6  -2.59431   TTCTCGGACAATCCA                 GCGG AAC CCAC                 CATGACACCCGAACA  43 366
JLK41_RS13440 2811261 .. 2811283 -  -3.3  -3.01712   CCTGGCTGCCGAAGA          CG-CCCAGGC TTCG GCCGAGGTCG           AGCTGTACAGCGGCA  42 162
JLK41_RS13415 2803143 .. 2803156 -  -6.7  -3.34344   CGATCCTTGAACGAA               CGGTA GGCC TACCG                GGTATAGCGACCAGC  56 53
JLK41_RS13410 2802198 .. 2802218 - -16.9  -3.09803   CAATGGGAGGCAAGA            CCTTGCCGC TGG GCGGCAAGG            TGGCAACGACGTCAG  87 37
JLK41_RS13405 NONE
JLK41_RS13390 2797781 .. 2797796 -  -5.4  -2.90392   TAGCCGCCAAGTACA              GCGTCGG CGC CC-ACGC              GTTCATCCTGGCGCA  46 463
JLK41_RS13355 2790750 .. 2790781 -  -2.9  -4.08216   CCATCTCCTTTAAAA      TCCGTGCAGCCCCA ACTCA CAGGGCTGC-CAGC      CCATGCTAAGCCTAT  57 137
JLK41_RS13340 2789394 .. 2789416 - -14.8  -3.54424   CTCCATCGGGCGAAA           GCGCGTCGTG CTG CTCGACGCGC           TGCCGCTCATGGGAT  90 32
JLK41_RS13315 2785491 .. 2785508 - -12.7  -2.64616   GGCTGATCGACACGA             CGCCACC TTCG GGTGGCG              TCTTGCTTTCAGGGG  68 34
JLK41_RS13285 NONE
JLK41_RS13280 2779590 .. 2779601 -  -7.2  -4.10657   CGACACGGCGTAAAA                CGCC TAGA GGCG                 TTGTTGGCGAGCAGT  68 274
        radC 2778832 .. 2778846 - -12.8   -4.7254   AGGGCGCAGCAAAAA               GGGGGC TCT GCCCCC               CTTGGTTCATAGCAA 100 32
JLK41_RS13270 NONE
JLK41_RS13265 2769115 .. 2769136 -  -2.1  -3.15249   GACATGTTGCATCAA           GTCCTTGGG CTAG CCCGCAGAC            AGTCAAACCAGCGGT  43 507
JLK41_RS13260 2768240 .. 2768266 -  -2.9  -4.07885   GACCTCTTGCTAAAA        CGGCA-ACTGCA AAGG TGCGGGGTGCCG         GGGAGAGGACTGTGA  57 88
JLK41_RS13255 NONE
JLK41_RS13250 2767427 .. 2767485 - -16.7  -2.62024   CAGCACCAGAATTGA CGATCAGGCTCA-GGCCGCCGCTGGG CATGCAGC CCCAGCGGCGGCTATGGGCCTGGTGG GAATGGCGCCGCCCA  83 304
JLK41_RS13240 2766353 .. 2766374 - -14.5    -4.254   GCAATAGCGAAGAAA           GGTCAGCCT GCCG AGGCTGACC            TGGCGCAGTTCCCTC 100 44
JLK41_RS13230 2764455 .. 2764470 -  -4.7  -3.12668   TATGCCGAGATGCAA              GACGA ATACAG TCGTC               AGTTCAGCCTGCCGC  47 278
        ftrA 2757683 .. 2757708 -    -9  -4.72272   GCTGTTGACGAAAAA         CAGGAGCCGGC CAGAT GCCG-CCCCTG         GTACGCGATTGAGTC  85 79
JLK41_RS13145 2750264 .. 2750290 -  -3.5  -4.59982   GCACAAGCAAAGAAA         GTGAGTCGCCC GTAAG GGGCGAAACCC         AGCAGATCAGACGAC  70 72
JLK41_RS13110 NONE
JLK41_RS13105 2735902 .. 2735922 - -13.3  -3.93695   CGCACCAGGGATAAA            CGCCGATCT GCC AGACCGGCG            CCTATTCCCGGTCCG  91 322
JLK41_RS13090 2730208 .. 2730235 -  -6.2  -4.08216   TCACGCCTGGTAAAA        GGCCCCGG-CCTA TTG CAGAACCGGGGCA        AGGACCACAGGAGCA  65 88
JLK41_RS13085 2729179 .. 2729198 -  -4.8  -2.80816   CCCGGAGCCAGCACA            GCTTCGCC CCGG GGCGGGGC             TCCTACGGCTGCGGC  43 76
        malE 2727782 .. 2727799 - -10.5  -5.76949   GATCGCCAAAAAAAA             GAGCGGC CGAG GCCGCCC              GAATTTCCCTGGAGG 100 61
JLK41_RS13075 NONE
JLK41_RS13070 2726072 .. 2726088 -  -2.2  -3.53012   CCGGTCGCGGCTAAA              GCCCCT CCCAC AAGAGC              AGAGTCAGCTGGCCT  47 30
        arsJ 2724388 .. 2724403 -  -4.6  -2.90075   TGCGCTGCAACCAGA              TCGAGC TGTC GCTCGC               CGCCCAGCAGGCGGT  44 352
JLK41_RS13035 2718756 .. 2718769 -  -5.2  -3.53012   TGCCTGCCGCCGAAA               GGCG GATGAT CGCC                CTAGATCGGCTCCTC  52 26
        ubiM NONE
JLK41_RS12960 2700881 .. 2700896 -  -2.5  -3.69354   TGTCACAAGCCGAAA              GCGCGG AGCTA CCGC-C              TGCATCGTTGGTGAA  49 91
JLK41_RS12925 2693505 .. 2693523 -  -5.9  -4.07618   TCTGGAAGAAGGAAA             TGTGCGC GCAGG GCGCTCA             GTGGGTGGATGCGCG  66 78
        ytfE NONE
JLK41_RS12890 2687412 .. 2687442 - -16.8  -3.65224   AGGCGAGGCCAACAA       CGACTCGACCCGCG TAT CGCGGGCCGAGCCT       AGCCAATACACATCC 100 48
JLK41_RS12885 2686739 .. 2686755 -  -5.7  -2.78018   ATGCTGGATGAAGTA              GGCGCCA GGG CGGCGCG              CCGGGAGATCGCCAT  46 282
JLK41_RS12850 2679605 .. 2679623 -  -3.7  -2.87931   CCGAGCGGCCAGACA             GCTGGAC GTCGA GCCCCGC             GAGCGGCTGTCCAAG  43 378
JLK41_RS12825 NONE
JLK41_RS12820 NONE
JLK41_RS12815 NONE
JLK41_RS12810 2674002 .. 2674016 -  -5.6  -3.40403   CGTTTCGCAGTACAA               CTGGCG CGC CCCCAG               CAGATGCTCGACAGC  53 135
        hemN 2669462 .. 2669472 -  -8.2  -3.14132   CCTGCGCTTCATGAA                 CGCC ACC GGCG                 GCTGATCAACTCCCG  57 108
JLK41_RS12745 NONE
        narL NONE
JLK41_RS12735 NONE
JLK41_RS12730 NONE
JLK41_RS12725 2652756 .. 2652768 -  -5.5  -2.68636   AAATCAGGAAAAATC                GCGGA GGA TCCAC                CTAGCGCAGCGGCCG  46 199
JLK41_RS12720 2652111 .. 2652132 - -17.3  -4.08557   GGGCGCAAAGAACAA           GGCACCGGG TCGC CCCGGTGCC            TTCTGCTGGCCTAGC 100 36
JLK41_RS12715 NONE
JLK41_RS12710 2650416 .. 2650439 -    -8  -2.50074   TTTTCCAGAAGATAT          CCCCGTGCCG TCTA CGGCACGCGC           CGGAAGGCCAGCAGC  52 13
JLK41_RS12705 NONE
JLK41_RS12700 NONE
JLK41_RS12695 2648674 .. 2648696 -  -5.5  -3.57263   ATGGCGACTTCCAAA          GCTCCTGGCC GGCA GGCGAGG-GC           AGAGGTATCTGCAGC  57 110
JLK41_RS12690 2646446 .. 2646475 - -10.6  -3.02144   GCAGTGGCTGCAACA       GGAGCCGGCGCT GGTATA AGCCCCGGCGCC        TGTTGCTCAACCAAT  64 32
        hemA NONE
JLK41_RS12675 NONE
JLK41_RS12670 NONE
        asnB NONE
JLK41_RS12660 NONE
JLK41_RS12655 2638469 .. 2638494 - -11.8  -4.42974   GCCAGATACAACAAA         TGCGGCAGCC TGAGTG GGCTGCCGCT          AAGACTCTCTTCTGA  93 79
JLK41_RS12650 NONE
JLK41_RS12645 NONE
JLK41_RS12625 2633215 .. 2633235 -  -4.7  -4.56597   GCCCCGGTGGAAAAA            CCCAGCA ACAAATG TACTGGG            TGGATGCACGTTAAA  70 236
JLK41_RS12620 2632494 .. 2632518 -  -8.6  -3.28712   CGGCGCCTGGCATAA         GCTGC-GCACCG ATC CGGTGCTGC-GC         TTCCTGGTGGTGTCG  59 351
JLK41_RS12550 2616409 .. 2616419 -  -6.8  -2.72991   GGATATTGCTAATGA                 CACC GCA GGTG                 TTGTCCGTGTGCTTG  48 282
JLK41_RS12540 2614768 .. 2614781 -  -3.1  -4.32678   TGCTCAAAGAAATAA               CTTCC ATTC AGAAG                ATATTTCTTGTGTTC  65 103
JLK41_RS12535 NONE
JLK41_RS12530 2613802 .. 2613814 -  -3.3  -4.77036   CCTCAGGATTAAAAA                GGTGC ACA GCATC                GAATATTCATCAAGT  74 35
JLK41_RS12525 2612252 .. 2612271 -  -3.4  -3.46914   ATTACTGAGCAAACA            CAGTCTGC TCTC GCGGCCTG             GATACACCAAGCCCA  48 525
JLK41_RS12510 2606983 .. 2607001 -    -3  -4.42235   AATCGCCAAAAATAA             CCAACCCT CAT AGGTGTGG             ATGTAGGTTATGTCC  63 226
JLK41_RS12500 NONE
JLK41_RS12495 NONE
        trbB NONE
JLK41_RS12485 NONE
JLK41_RS12480 NONE
JLK41_RS12475 NONE
        trbJ NONE
JLK41_RS12465 NONE
        trbL NONE
JLK41_RS12455 NONE
        trbG NONE
JLK41_RS12445 NONE
JLK41_RS12440 2594707 .. 2594718 -  -4.4   -3.2056   ATGCAGACTTATCAA                TTGC CGGT GCAA                 GATTGTGTATTTGTT  48 10
JLK41_RS12435 NONE
JLK41_RS12430 NONE
JLK41_RS12425 2593777 .. 2593795 - -11.6  -5.24129   TTTTCCCACAAAAAA             GCCGCCTC TGA GCGGCGGC             TTCTTGCTGGTTCGG 100 48
JLK41_RS12420 NONE
JLK41_RS12415 2592043 .. 2592071 - -16.1  -3.75332   AGCCTCCAATCCAAA        GGCCTCGTAGATC AAT GATTTACGAGGCC        TTTTTCATTCTCCAT  95 267
JLK41_RS12370 NONE
JLK41_RS12365 NONE
JLK41_RS12360 NONE
JLK41_RS12355 2581626 .. 2581643 -  -5.5  -2.78384   GTGGTGTTCATCAGA             GCAACTC GACG GTGTTGC              GGCTGATGCCGAGCA  46 3
JLK41_RS12350 NONE
JLK41_RS12345 NONE
JLK41_RS12340 NONE
JLK41_RS12335 NONE
JLK41_RS12330 NONE
JLK41_RS12325 NONE
JLK41_RS12320 NONE
JLK41_RS12315 NONE
JLK41_RS12310 NONE
JLK41_RS12305 NONE
JLK41_RS12300 NONE
JLK41_RS12295 NONE
JLK41_RS12290 NONE
JLK41_RS12285 NONE
JLK41_RS12280 NONE
JLK41_RS12275 2570262 .. 2570283 - -11.5  -5.98781   TACAACCAAAAAAAA           GCCGGCGCT GGGG AGGGCCGGC            AAGGGAGTAAAGCTG 100 109
JLK41_RS12270 NONE
JLK41_RS12265 NONE
JLK41_RS12260 2567987 .. 2568007 -  -3.9  -3.40597   GCTGCCAGTGAAATA            CCAGGGC GAGGTCT GCCATGG            CGTCTTCTACGCAGT  47 32
JLK41_RS12255 NONE
JLK41_RS12250 NONE
JLK41_RS12245 2564929 .. 2564940 -  -3.6  -2.62184   TCCGCTGTCACAGCA                GCCC CCAG AGGC                 CGCTGGCGTTGCTGC  40 6
JLK41_RS12240 NONE
JLK41_RS12235 NONE
JLK41_RS12230 2562833 .. 2562851 - -13.1  -4.46212   GCCCCGACTAGAAAA             GCCCCGC CGAGC GCGGGGC             TTCGTCGTTTACAGG 100 34
         dcm 2559823 .. 2559848 -   -12  -4.30978   GTTAAGGCATTAAAA         TAAAAGGGGC TGTAAC GCCCCTTTTA          TTCATCTTCCCAGAT  93 23
JLK41_RS12185 NONE
JLK41_RS12180 NONE
JLK41_RS12175 NONE
JLK41_RS12170 NONE
JLK41_RS12165 NONE
JLK41_RS12160 2552876 .. 2552897 -  -4.4  -3.08371   CACAGCGTGAACAGA           GCAACGAGC GCAAG GC-CGCTGC           CGAGCAACGTGATGG  46 123
JLK41_RS12155 NONE
JLK41_RS12150 NONE
JLK41_RS12145 2551102 .. 2551112 -  -2.4   -2.5805   ATCAGCGTGCATAAC                 GGCG GCG CTCC                 TGCTTGGCGAGGCGT  38 1
JLK41_RS12140 2550494 .. 2550529 -  -2.4  -2.59564   GTGGTAGCGGATAAC    CGGTGCGATG-ATGGTC ATG GCGCATTCCTCGCGCCG    CATGTGCGTGCGACC  38 4
JLK41_RS12135 NONE
JLK41_RS12130 NONE
JLK41_RS12125 2549137 .. 2549175 -  -9.7  -2.94218   ACGTCGTAGTACATA  GC-GCAAGAATACTGGTT GAGT ATCCAGTATACTTGCCGC   AGAACGGGCCAGAGT  59 66
JLK41_RS12120 2548720 .. 2548743 - -13.8  -3.79113   ATGGGCCGATAAGAA          GCTCGGCCCG AGGT CGGGCCGAGA           AGATGCAGCGGTTGT  91 67
JLK41_RS12115 2547469 .. 2547493 -   -10  -2.78868   GAATAGAGGTAAGCA          GGGAGGGC AGTCGAATG GCCCTCCC          GGTGGGGTGTTACAG  61 35
JLK41_RS12105 2546416 .. 2546431 - -11.8  -5.49579   GGATAAAAAAGAAAA              GCCCGC CGAA GCGGGC               TCGAAGGGGGACGAA 100 47
        tusD NONE
        tusC NONE
        tusB NONE
JLK41_RS12085 NONE
JLK41_RS12080 2543877 .. 2543929 -  -4.1  -3.73647   CCCATCGATCAACAA GCCCATGACGCCTGCCTCC-GTTT TGAATG AAACTGGAGTCTATCGTCACCGGC TCGATTGAAGCGTTG  54 52
JLK41_RS12075 2542833 .. 2542849 - -10.1  -2.57132   TCGCGCTTCCAGAAT              TCCGGGA ATG CCCCGGA              TGAACAACCTACTGA  60 51
JLK41_RS12070 2541824 .. 2541844 -  -3.9  -3.73647   TCGATGGATGAAGAA            GGCCTCA TCCACCC TGCGGCC            TAGCTGTGTAAACCC  54 25
        trxB NONE
JLK41_RS12030 2532126 .. 2532148 -  -2.8  -4.07568   GGTGTCTCGGGAAAA          CCTGAC-TA AGAGTG TATGTCAGG           GTTGGCCAGTCGACT  57 39
JLK41_RS12025 2531289 .. 2531315 -  -5.7  -3.76224   TCGGTATCCAGGAAA         TGGCCCGGCGC GACTG GCCCCAGGCAA         AAGCGGCGTGCATTG  60 110
        infA 2530998 .. 2531029 - -24.6  -3.57144   CGCTGCACGCGCAAA      CGAAAACGCCCGGC AGTC GCCGGGCGTTTTCG       TTTGGTGCTTGGCTT 100 39
        cspD 2527741 .. 2527760 -   -15  -5.52986   AGCGCATGAAAAAAA            GGCCGGTC ACAT GACCGGCC             TTCTTGTGGCGATTT 100 51
JLK41_RS11995 2523822 .. 2523846 - -17.2  -5.24129   TCGCGCTATAAAAAA          GAACCCCGGC ACGGG GCCGGGGTTC          TTTTCACGCTCAAGC 100 45
JLK41_RS11990 2523265 .. 2523311 -  -2.1   -3.9712   CGAGTCTACCAGAAA GCCTTGGTCCGCCCCACACGACG ACG CGCCGCGTGCGCGGGATC--GGC GTTGCCGCCGCGACG  54 42
        mnmA NONE
        hflD NONE
JLK41_RS11975 2520608 .. 2520639 -  -2.2  -4.40237   TATCATACATGAAAA      CCA-ACGCTTCGC CGCCTAT GCGCTGCGTCTGG      CGACCGATAGCAGGC  63 9
        purB 2519059 .. 2519089 - -17.6  -3.69455   ATAAAAACCTTTAAA       CAAAAACGCCCGGC TCA GCCGGGCGTCCTCG       AGGCTGGTGTCGCTC 100 39
JLK41_RS11965 NONE
JLK41_RS11960 NONE
JLK41_RS11955 NONE
JLK41_RS11950 2515527 .. 2515537 -  -2.4   -4.4017   TGAACGGCGAGAAAA                 CGGC TGG GGCG                 AGGATGTACCGCGAG  63 472
JLK41_RS11945 2513792 .. 2513818 - -13.8  -4.22883   GATTAGGCAAAAGAA         CTGCTGCGGA TGCGTGG TCCGCAGCAG         AGAACCGTTCTTAGT 100 36
JLK41_RS11940 2511548 .. 2511561 -  -3.7  -3.32844   TGTTCCAGCTTAGAA               GCCGC GGCT GCGCC                TTGCCTGTTCCATGC  47 94
JLK41_RS11935 2510526 .. 2510554 -  -8.1  -3.39895   GCGCTGATCAAGCAA       CGCTGG-GCGAC CGATAC GTCGCGCCTGCG        CAGCCAGCTGGCCAG  59 322
JLK41_RS11925 NONE
JLK41_RS11920 2507694 .. 2507728 -  -3.5  -3.00629   GAACAACGTAGAAAG    TGGGCGTGAGGCTTGC GCAG GCAAGCATCG-GCTCA     GACTTCGTCAGGGCT  43 23
        nuoC NONE
        nuoE NONE
        nuoF NONE
        nuoG 2501272 .. 2501282 -  -2.4  -2.70932   TTCGGGCGTCAACCA                 GCTC ATT GTGC                 GGCCTCCTGCAGCAG  39 17
        nuoH NONE
        nuoI 2499665 .. 2499681 -  -4.4  -2.80994   GCGAATTCCATTACA             GGCT-CC TCAC GGTAGCC              CGCGCACGGTGGCGG  43 69
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 2493929 .. 2493946 - -14.1  -5.18726   GCCTGAGAAGAAAAA             GCCCCGC ATCT GCGGGGC              TTTGGCTTACTGCGC 100 32
JLK41_RS11855 2491736 .. 2491759 -   -16  -3.01712   GGTTGTTTGCCAATA          GGCGTGGCGG AAAA CCGCCACACC           ACTTTCGCATCACTT  83 35
        xthA 2458328 .. 2458339 -  -4.4  -3.19463   TGGATCATTCAGCAA                TCTG CAGC CAGA                 TCGGCGCGTGATCCG  48 3
JLK41_RS11700 NONE
JLK41_RS11695 2455228 .. 2455244 - -12.3  -2.62983   GTGACTCCGACATCA              CGGTGAG CAG CTCACCG              CCAGAGGGGCCCGGC  68 111
JLK41_RS11690 NONE
JLK41_RS11685 2453957 .. 2453979 - -19.2  -3.25823   GCCGCTGTAGATGAA           GAGGCCCGCA TTC TGCGGGCCTC           TGCGTTTGCGCCTCA  91 38
JLK41_RS11675 2451573 .. 2451602 - -17.9  -3.33696   TCGCTTCGCAAGCAA       CAGGAAGGCCCGC CAAT GCGGGCCTTCTTG        CGTTCAGCGCCGGGC  95 43
JLK41_RS11660 NONE
JLK41_RS11655 NONE
JLK41_RS11650 2446516 .. 2446534 -  -7.4  -5.03994   GGTCAGACAGAAAAA             CGTCACGC AAC ACGTGACA             ATAAAATGTCGTGAC  89 136
JLK41_RS11645 NONE
JLK41_RS11585 2432459 .. 2432483 -  -9.9  -2.82516   TGGCGGACGAGGAGA          CGCGCGGTTGA TCG TCAGCCGCGCT          CGCTTTCGTACTTGT  61 15
JLK41_RS11525 2420441 .. 2420474 -  -3.2  -2.64155   TTGTGGTGAAAGTCA    CAGCGCAG-TGAGTAC AGTT GTACTCCGCTG-GCCG     CGCAATGTCACAGAC  40 88
        fabA NONE
        fabB 2418535 .. 2418552 - -14.1  -5.07652   GCCGGCAAAAGAAAA             CGGCGCC CTGG GGCGCCG              TTCTGCTTACAGCCG 100 49
JLK41_RS11485 NONE
JLK41_RS11480 NONE
JLK41_RS11475 NONE
JLK41_RS11470 NONE
JLK41_RS11465 2409036 .. 2409050 -   -10  -3.06796   TTCGAGTTCACCGAA               CACCAC GAG GTGGTG               CCCGGCGAGTGGCAT  60 98
JLK41_RS11450 NONE
JLK41_RS11445 NONE
JLK41_RS11440 NONE
JLK41_RS11435 NONE
JLK41_RS11430 NONE
JLK41_RS11425 2402373 .. 2402394 - -17.3  -3.57144   TTGCGGAGGGTGAAA           TCGCCGGCC GCAG GGCCGGCGA            TCCATCAGTTGGCGC 100 30
JLK41_RS11420 2401240 .. 2401252 -  -4.7  -3.25823   CGTCGCCGAGATGAA                GGCCG CCG CGGTC                GACTGGCAGTTGGTC  49 225
JLK41_RS11380 2390819 .. 2390837 -   -16  -5.00138   CATTGAAATGAAAAA             GGCCCGCA AAA TGCGGGCC             TTTTCGCAGGCGCCT 100 46
        gltA 2374848 .. 2374865 - -12.7   -4.8622   GGCGGGAATGAAAAA             GGCTGCC GGAT GGCAGCC              TTTCTTGTCGTGCAG 100 48
JLK41_RS11295 2372265 .. 2372280 -  -3.2  -3.22906   GCATGGCCATAAAAG              GGGC GCCAGTAT GCCC               AAGCGCCTTTTTTTC  45 45
JLK41_RS11290 2371842 .. 2371858 - -10.8  -5.26875   TGTTCAACGAAAAAA              CCGGCC GCAGG GGCCGG              TTCTTCATGAGGCTT 100 46
        rhtA 2370917 .. 2370933 - -10.8  -2.64735   AGCTGATCGACAGCA              GCGCGC TGTAT GCGCGC              CTGGCAGAGCTGCAG  59 49
JLK41_RS11255 2366135 .. 2366154 -  -2.8  -2.71364   CCAGCCGGTCAACGA            CGA-GGTGG TCG CCAGCGTCG            ACGATTTCAGCCACG  40 212
JLK41_RS11245 NONE
JLK41_RS11240 2363855 .. 2363870 -  -2.6  -3.71848   GGTGGCCAGGAACAA              CATAAT GCGC ATCATG               GTGTGAACGGACTCC  52 118
        htpX 2362959 .. 2362976 - -12.7  -4.72986   CAGCGTCATGAAAAA             GGCGACC CTGG GGTCGCC              TTTTCTTTTGCGGCT 100 46
JLK41_RS11225 2361402 .. 2361414 -  -4.8  -3.16191   GGACAGCGTGAGGAA                CGAC GGCTA GTCG                AAGCGGTAGATGTCC  48 19
JLK41_RS11215 2360248 .. 2360287 -  -9.2  -3.06796   TGCGACTGGACTGAA  TGCAGGTACGAGGCCCGT CATG ACGGGCCTCGTGTTTTCA   GGCCTGGCTGACGTA  60 23
JLK41_RS11200 NONE
JLK41_RS11195 2356875 .. 2356893 - -14.6   -5.4505   CCGGGCAATAAAAAA             CCGGAGTC CAG GACTCCGG             TTTTCGTGTCTTGCG 100 54
JLK41_RS11190 NONE
JLK41_RS11185 2354729 .. 2354759 - -19.2  -3.53012   CTGGTCGTCCTGAAA       CGAAAAAGGCACCC ATC GGGTGCCTTTTTCA       TTCTGGCCAGGGCCT 100 40
JLK41_RS11165 2349370 .. 2349401 -  -9.5  -4.19238   TCCTGAAGGGTAAAA      CGGGCGC-AGGA GTATAGAGT TCCTGGCGCCCG      CTGTCCCGTCCGGGT  79 67
JLK41_RS11160 NONE
JLK41_RS11155 NONE
JLK41_RS11150 2347953 .. 2347967 -  -2.1  -2.71681   CAAGTCGTTGAATGA              CTTGGC TTTG GCCA-G               ATCCGGCGGACTCGA  39 62
JLK41_RS11145 NONE
JLK41_RS11140 NONE
        sulP NONE
JLK41_RS11130 NONE
JLK41_RS11125 NONE
JLK41_RS11120 NONE
        cydB NONE
        cydX NONE
JLK41_RS11105 2339485 .. 2339516 - -23.2  -4.41348   CCCGCTCCAAATAAA      CGAAAACGCCGCTC ATTC GAGCGGCGTTTTCG       TTTCTGCGATTTGCC 100 42
JLK41_RS11080 NONE
JLK41_RS11075 2337304 .. 2337333 - -20.9  -3.60627   TCAGGTGACGTGAAA       TGCCCCTGATCCT CGCA AGGATCAGGGGCA        TTGTTCTTTCAGGGG 100 79
JLK41_RS11065 2335714 .. 2335730 -  -9.4  -2.87931   TGCAGGCCTGACAGA              GCAGGC GCAAG GCCTGC              TCGTGCGCGGTGCGA  59 47
        gloB 2326816 .. 2326841 -  -3.1   -4.3739   CATGGCGCCAGAAAA         CCGCTGCTGGCA AGG CGCCGGC-GCGT         TCGTCGGCGAATCAG  65 37
JLK41_RS11020 2324776 .. 2324795 -  -7.8  -3.01712   CGTGGTTGGCGAAGA            CACCCAGC ACTG GCTGGACG             ACTTCGTCCTGCCAG  53 337
JLK41_RS11010 NONE
JLK41_RS11005 NONE
JLK41_RS11000 NONE
JLK41_RS10995 NONE
JLK41_RS10990 NONE
JLK41_RS10985 2315204 .. 2315245 - -22.7  -3.02144   CGAGGCGCTGGAACA GGCAATAATAAAACCCGCAC GGC GTGCGGGTTTT-TTATTGCC TGCCATCCGGGGATG 100 86
        folD 2305117 .. 2305134 - -12.7  -5.75945   AGCCGCGAAAAAAAA             CGGCACC CTTG GGTGCCG              TTTTCGATTCAGCCG 100 47
JLK41_RS10900 2296837 .. 2296849 -  -4.7  -3.91897   GGCGCGATCCAGAAA                CTGCC GAC GGCGG                TGACCGGCGCACTGT  61 194
JLK41_RS10890 NONE
JLK41_RS10885 2294249 .. 2294275 -  -2.8  -3.86283   GCAAGGCAGAGGAAA         TCGCCAGTTTCG TGG CGTACCTGGCAG         GCCCCGAAGCGGCCT  56 161
JLK41_RS10875 2292467 .. 2292525 - -18.9  -3.14132   CGCTTGGCCGAGTAA GCCCCGACGCTGAACGACGAAGGCCGCT GTGA AGCGGCCTTCGTCATTTT-CGGGGGGGC TCCGTGGTGGCGGCC  91 10
JLK41_RS10860 NONE
        lpxH 2287799 .. 2287821 -  -6.2  -3.53444   GTAGGGCGGGTGAAA           CCCGCCGT GAGGGAG ATGGCGGG           TTTCACCCGCCCTAC  55 82
JLK41_RS10845 2285987 .. 2286008 - -15.9  -5.03994   CGGCAGATACAAAAA           TGCCGCTCG ACCT CGAGCGGCA            TTTTCATTTCGGAGG 100 46
        acnB 2282444 .. 2282462 - -13.1  -4.72272   GGCGCCCATGAAAAA             GCCCCGC ACTGG GCGGGGC             TATTGTCACAACGCT 100 45
JLK41_RS10830 2282008 .. 2282050 - -22.2  -5.60993   TTGGCCATAAAAAAA CGTCGTACCCGATCCGGC GCGGATG GCCGGATCAGATACGACG CCGTTGTCGATCGAG 100 101
JLK41_RS10825 NONE
JLK41_RS10820 2279954 .. 2279993 -  -6.5  -3.14132   GTGTTCGGTCATGAA GGGTTCCTCGGCTAGGG GTTGTCTA CCCTAGCCGAGG--CCG  GCGGGACGGGGCATA  54 128
JLK41_RS10815 2278513 .. 2278534 -  -7.9  -3.12351   TCCTCGGATACGTAA           GCGCCCGGA ACCG TCCGAGCGA            CGTTGGTCACTGCTG  56 89
        alaC 2277239 .. 2277256 - -14.1  -3.95073   CCGCAGATGGAGAAA             GGGCGCC TTGC GGCGCCC              TCTGTCACTGTTCCT  91 30
JLK41_RS10805 2276366 .. 2276382 -  -4.3  -3.35679   GGTGCGCACCGACAA              CCCGCCT GCC AGTCAGG              CGCTGGCCAGTTCCG  49 21
JLK41_RS10800 NONE
JLK41_RS10795 2275767 .. 2275782 - -11.8  -3.92075   ATTCGCAGTCAGAAA              GCCCGG ATTT CCGGGC               TTTTTCATGCCTGCC  82 30
JLK41_RS10785 2274346 .. 2274368 - -13.4  -3.53444   CGACTGGTGTGCAAA           GAGACGGCCC GAT GGGCCGTTTC           TTTTTTGGGGAGCGT  86 44
JLK41_RS10770 NONE
JLK41_RS10765 2268993 .. 2269015 - -12.7  -2.78463   AGGCGCTGGAGGAGA          GCCTGCCGGG CTAG CCCGGC-GGC           GGGAGCTTGCGCGTG  69 13
JLK41_RS10755 NONE
        ccoN NONE
        ccoO NONE
JLK41_RS10720 NONE
        ccoP 2260847 .. 2260858 -  -2.2  -3.18274   GCCATTGCAACGCAA                CATG CCGA CACG                 AACGGGGTTTCAGAG  43 273
        ccoN NONE
        ccoO NONE
JLK41_RS10700 NONE
        ccoP 2257463 .. 2257496 - -21.1  -3.81755   ACGCCTGAAAGACAA     CGCCCGGGT-GCGACC AGC AGTCGCGACCCGGGCG     TTCATTGACCCTTGT 100 60
        ccoG NONE
JLK41_RS10685 NONE
        cadA NONE
        ccoS NONE
JLK41_RS10670 2251948 .. 2251986 -  -6.5  -2.61274   TTGATCTGAATCAAG  GGCGCGTGG-GGCGTCGA GCTG TCGTCGCTGCCTGGCGCC   AAAGCGATCCGGCCA  49 114
        hemN 2250253 .. 2250300 -  -9.9   -3.5241   GATCGCCGAGAAACA GGC-GCAGATCGAGGCGCTGAT GAGCG ATCAGAGCCTCGATCCGGAGGC GAAGCGCCAGCAACT  67 217
         fnr NONE
JLK41_RS10650 NONE
JLK41_RS10645 2247536 .. 2247569 -  -8.1  -2.77235   TGAACGATGTAACTA     TCGGGTGTGGCGGCGC CTG GCGCCGCCA-ACTTAA     GGCGGGTGTGCTGCC  53 99
JLK41_RS10640 2246551 .. 2246568 - -14.1  -4.72986   CACTTGCATGAAAAA             GGGCGGC CTGG GCCGCCC              TGCAGGGGTCTCAGC 100 36
JLK41_RS10630 NONE
JLK41_RS10625 2243145 .. 2243177 - -15.5  -3.90318   GCACTACCCGACAAA      CGCACAGGGCCGGCA GTG CGCCGGCCCTGTGTT      CGCATGCAGCCTGCT  95 39
JLK41_RS10620 2242630 .. 2242642 -  -6.9  -3.43492   GGAGATCGATCACAA                CGGCC TCA AGCCG                TTGCTCGATCCGCTG  56 130
JLK41_RS10600 NONE
JLK41_RS10595 NONE
JLK41_RS10590 NONE
JLK41_RS10585 2238742 .. 2238779 - -19.9  -3.86015   CACCCGCTCGACAAA   GCAAGACCCCGCGACCG GTGA CGGTCGCGGGGTCTTTT    TTTCATGCGCAGGCC 100 61
JLK41_RS10550 2231795 .. 2231809 -  -2.7  -2.57211   ATTGGCGTCGAGAAC               GCCGG TTTCG CCTGC               ATCATGGCCAACTTC  39 464
JLK41_RS10520 NONE
JLK41_RS10515 2225971 .. 2225995 - -21.5  -4.45544   CGCCATGAACGAAAA          CGCCCGATGCC AAT GGCATCGGGCG          CTCTGTTGACGGCGC 100 47
JLK41_RS10500 2223193 .. 2223218 - -14.7  -3.27489   GTAAGCTGAAACAGA         CCGGCCCGG-CA TTG CGTCCGGGCCGG         CAGACAATCAGTTCA  86 33
JLK41_RS10450 2214522 .. 2214538 -  -2.2  -3.29511   TGGATGGTTGCAGAA              GGCC AGCTACAGG GGCC              ACGGCCCGGACTAGT  44 36
JLK41_RS10445 NONE
JLK41_RS10440 NONE
JLK41_RS10435 NONE
JLK41_RS10425 NONE
JLK41_RS10420 2207761 .. 2207787 - -20.2  -3.73775   CGTAGCCGCAGCAAA         GCGAGAGGCTCC GCA GGAGCCCCTCGC         GAGTGCGCCTGAACC 100 44
JLK41_RS10390 2202314 .. 2202348 -    -4  -3.27298   GGCTGGAATCAGCAA     GCGCAGGTGCAGGGGC ATG GCGCCTCCTCGTGGGC     GAGGGGCGCAGTCTA  47 108
JLK41_RS10385 2201085 .. 2201096 -  -7.2  -3.30124   GGCGATCTTCGAGAA                CCCC AGCT GGGG                 CTGGCAGGACATCGA  54 502
JLK41_RS10365 2197067 .. 2197080 -  -9.5  -3.01712   CTCGGTTCCGTAAGA               GCGGC TTCA GCCGC                GATGCTCTTGCCCAG  60 166
JLK41_RS10360 NONE
        atuC 2194551 .. 2194564 -  -3.1  -3.28712   CTGGGTTTTTCAGAA               TCTGGC GAC GCC-GA               AGCTGCTCGTCTTCA  47 6
        atuD 2193307 .. 2193320 -  -3.1  -3.35798   AGGGTGGATCGATAA               GGCGTG ATC CAC-CC               TGCGTTCAGGCTTTC  47 31
        atuE 2192376 .. 2192397 -  -8.7  -3.53012   GCGGTTGCTCCTAAA           GGACGGC GGTGTCAG GCCGTCC            AAGCCATCATTGCGC  66 32
JLK41_RS10340 NONE
JLK41_RS10335 2189174 .. 2189200 -  -6.5  -3.59262   GGGCAGATCGGCAAA        TAGGCGTCGCTC TTCA GGGCG-CGCCCA         GGTGGCAGAGCAGGT  60 144
JLK41_RS10330 2186858 .. 2186871 -  -5.9  -2.78596   GAGGTGGCCAGCATA               GCGCC TGTC GACGC                GCAGCTAGCGGCCGA  47 393
JLK41_RS10285 2178865 .. 2178882 - -12.7  -4.72272   TCCCGCTACGAAAAA             CCCGCTC TGAT GAGCGGG              TTTTTTATTGCCTGG 100 43
JLK41_RS10270 2175140 .. 2175155 - -10.4   -4.8622   TGGCGCAATGAAAAA              GGCTCC CGAG GGAGCC               TTTTTCATGCCGAGG 100 45
JLK41_RS10190 NONE
JLK41_RS10185 2153068 .. 2153092 - -15.7  -3.54424   GTTCATGCTGCGAAA          GGAAGGCGCCC ACT GGGCGCCTTCT          GCGTTTCGGGGGTCA  93 38
JLK41_RS10170 NONE
JLK41_RS10160 2148280 .. 2148295 -  -2.4  -2.64803   TCAGGTGGAAACCCA              TGCAGG CATT CCCGCT               GCGCACCTCGACGTG  38 238
JLK41_RS10100 2141104 .. 2141128 -  -6.3  -3.15861   CAGCACCGCCATGAA          GGCGCCGAGCA TCG CGCTCATCACC          GCGATCCAGTCGCGG  50 74
JLK41_RS10095 2139494 .. 2139506 -  -6.9  -4.18018   CCGGTGGATGCAAAA                GGCGG CAT CCACC                CTACGGCTGGATTCG  71 153
JLK41_RS10085 2135663 .. 2135682 - -11.4  -4.96848   TGGTGCATACAAAAA            CACCGGCT TGCA AGCCGGCG             TTTTTGCAGTACTGC 100 47
JLK41_RS10080 2135386 .. 2135402 -  -9.4   -5.4833   GCAGGCAATAAAAAA              CCCAGC GCTAG GCTGGG              TTCTTGAATTTGGCT 100 36
JLK41_RS10015 2116066 .. 2116089 -  -2.4  -2.72144   GCATCTCTTTCAAAG          CATGGAAAGCG TAT CGCCGT-CATG          TTGCCAGTTTAAGTC  39 76
        ubiG 2115335 .. 2115353 -  -3.1  -3.66784   CCATGTCGAACAGAA            CTG-CGCG CAAA CGCATCAG             TCTTTCCTCAGCGTC  51 22
        mupP 2114580 .. 2114592 -  -3.3  -3.82486   ATCGAACATGAACAA                TCTCC TTC GGCGA                GCTGCAAGCCTCGGG  54 112
JLK41_RS10000 2113601 .. 2113627 -  -4.4  -3.42996   GACCATGGAGCAGAA        CCTCT-GGCGC GATGGT GCGACGAGAGG         GTTAGAGCGAATATC  52 231
JLK41_RS09995 2112621 .. 2112638 - -11.3   -4.7497   CTGAGTGATGAAAAA             GGGACTC CATG GAGTCCC              TTTTTCATTGCCGGC 100 52
JLK41_RS09985 NONE
JLK41_RS09980 NONE
        gltS 2108083 .. 2108109 -    -5   -3.1505   AGGAGCCTCGACGAA         CTGCCGCCGC TGGCCGC GCTGCGGGAG         CTGGAGCCCGAGCCG  47 311
JLK41_RS09940 NONE
JLK41_RS09935 NONE
JLK41_RS09930 2101263 .. 2101276 -  -8.1  -3.53012   CTCCTTGTCTCGAAA               CCGGT AACG ACCGG                ATGGGCTCAGTATGC  62 128
JLK41_RS09925 2100781 .. 2100807 - -20.8  -3.35679   TGTCCTCATGCAGAA         GCCGCCGGGCCC GGA GGGCGCGGCGGC         GGATCGATGGAGATG 100 45
JLK41_RS09920 2099080 .. 2099090 -  -8.2  -3.06302   AGGATTCCCAGGCAA                 CGCC CGA GGCG                 CTGAGCAAGGCCCGT  55 368
JLK41_RS09905 NONE
JLK41_RS09900 2094976 .. 2094986 -  -4.6  -2.78463   AGTTGCTCGACGACA                 CCCG CCG CGAG                 CTGGCCGAGCAGTAC  43 200
JLK41_RS09890 NONE
JLK41_RS09885 2093013 .. 2093056 -  -8.7  -3.05463   ACGGCGGCCAGCCAA GCATGACCGCCGAACGGTG GCGTAA CAGTGGCCGGCGGTCAGGC GTTCGCGTCGTCCAT  60 20
JLK41_RS09880 2090982 .. 2091032 -  -3.9  -4.17048   CGCGCCGGAAAAGAA CCT-GCAGGCGTTTCTCGACCTGGC GCT GCCCGG-CGAGAAGCGTGTGGTAGG CGATGGCCCGCAGCG  65 496
JLK41_RS09865 NONE
JLK41_RS09860 NONE
JLK41_RS09855 NONE
JLK41_RS09840 2084044 .. 2084064 -  -6.8  -3.25823   CCTGGCGTACATCAA           GCAG-GGCG ATGT CGCCACCGC            GTGTGACATCCTCAA  54 171
JLK41_RS09815 2077077 .. 2077097 - -11.8  -3.54424   TGGCATGGGCGGAAA            CAGCCGGG TTGAC CCCGGCCG            TGGCCAATCAGTGGC  74 33
JLK41_RS09810 NONE
JLK41_RS09805 NONE
JLK41_RS09800 2073489 .. 2073516 -   -17  -2.69964   CTCTCAACTAGAGTA        GGCCCGCTGCCA TACT TGGCAGCGGGCT         TTTCTACGTGTGGTT  84 468
JLK41_RS09785 NONE
JLK41_RS09780 NONE
JLK41_RS09775 NONE
JLK41_RS09755 NONE
JLK41_RS09750 2054331 .. 2054345 -  -2.8  -2.91695   GGCAGGGGGAAATCA               CAGC GCGCTCG GCTG               GTGCTTCAGATGGCC  40 8
JLK41_RS09745 NONE
JLK41_RS09740 NONE
JLK41_RS09735 2051123 .. 2051148 - -10.6  -4.59773   CGGCAGGGGCAAAAA         CTTACTTCAG GATTGT CTGAAGTAAG          TGCCTGACTCCCCGA  89 80
        speB NONE
JLK41_RS09725 NONE
JLK41_RS09720 2047011 .. 2047021 -  -2.4  -3.55444   CGCTCAGGGGTGAAA                 GGGC GCT GCCT                 CCTGCACTTCGATGA  47 3
JLK41_RS09715 NONE
JLK41_RS09710 2044415 .. 2044432 - -11.3  -2.64794   CCTAATCTCATAGGA             GAGCACG CCAG CGTGCTC              TCCCATCTACTTGGC  64 205
JLK41_RS09700 2041137 .. 2041166 -  -4.9  -2.76696   TTCGTGCCGAAGAAC       CTCGATCTGGCCA TGGT CGATCAGGTCGAG        CAGGTCGCCGATGAC  43 425
JLK41_RS09690 2039343 .. 2039366 -  -5.3   -3.9009   AACCCACCCTACAAA         GGC-GCTG-GC CGAC GCGCAGCCGCC          CGATGTTTACCGAGA  62 32
JLK41_RS09685 2037982 .. 2038011 - -19.3   -4.8622   CCGGGCAAGGAAAAA       CGCCGCGACACCT GTGA AGGGGTCGCGGCG        TTTTCGTTGCGGCCG 100 43
JLK41_RS09655 NONE
JLK41_RS09650 2030879 .. 2030897 -  -8.8  -2.89564   CTTTGACGCCAGAGA             GAGTGCCG CGC CAGCACCC             GCTTCAGGGGGCTGG  59 68
JLK41_RS09645 2029032 .. 2029073 - -10.7  -3.68351   CGGGCAGCAGGCAAA CCCGGCAGGGCGGCGTCG CGTTCAC CGGCGCCGCCC-GCTGGT ACCCTAGAAACTGAA  73 29
JLK41_RS09640 2028136 .. 2028146 -  -8.2  -4.09827   CAGAATAGAACGAAA                 GCGC ATC GCGC                 AGGAGGTCTTCGATG  71 343
JLK41_RS09630 2027560 .. 2027583 -  -4.5  -2.82193   ACGACAGCTACGACA          CCCAC-CGGC TGTTT GCGGAGTGGG          CGCCGACGATGAAGG  44 175
JLK41_RS09585 2018033 .. 2018062 - -15.7  -3.63569   GGAAGGTCTGAACAA       GCGGCCCGTGCCTG CAA CGGGCA-GGGCCGC       TTCGTCGCTCAGTGA  93 34
JLK41_RS09570 2014573 .. 2014587 -  -3.4  -3.85698   TGGTTCTTCGATAAA               GGCCCC ACC GGGAGC               GGGGTTAGCCGCTCA  56 143
JLK41_RS09565 NONE
JLK41_RS09560 NONE
JLK41_RS09555 NONE
        mobA NONE
JLK41_RS09440 NONE
JLK41_RS09435 1991592 .. 1991609 - -12.7  -5.64274   CCAGGCATAAAAAAA             CCCGCCT TGAC AGGCGGG              TTTTTGATTTGGTCG 100 35
JLK41_RS09420 1988491 .. 1988517 - -23.8  -4.72272   CTTCGCCATGAAAAA         CGCCGCGACCTG CAG CAGGTCGCGGCG         CTCCGTCGGTGCCGG 100 46
JLK41_RS09415 1987798 .. 1987816 -    -8  -3.41527   GAAGGCCGAGCAGAA             GGCCCGCG TGG CGCAGGTC             AAGCAACTGATCGAG  59 344
JLK41_RS09380 1978255 .. 1978273 -  -4.5  -3.28712   CCCGTCGCCTCAGAA             GTTCTGC GTCAG GCCGAAC             ACGTAGCGTCGGCCA  49 1
JLK41_RS09365 1973128 .. 1973144 -  -2.1  -3.09273   GCTGCTGAACAGACA              GATACGC ATG GCGGTTC              CTCAGGCACTCTGCG  41 27
JLK41_RS09360 NONE
JLK41_RS09355 NONE
JLK41_RS09350 1971230 .. 1971270 - -20.5  -2.55351   TCGCCTGACAGGAAG  CGGGGCGCTCAGCGACAAC GGC ATTGTCGCTGAGCGCCGCC  TACAGTGGCGTCACT  95 36
JLK41_RS09335 NONE
JLK41_RS09330 NONE
JLK41_RS09325 1965037 .. 1965060 -  -6.6  -4.25283   ATCCGGCGAGGAAAA          CGTGGCACCG GCAC CATCGCCACG           CACCGTGACGAATGG  71 101
JLK41_RS09300 1958925 .. 1958968 -  -9.4  -2.57132   CCGCTGCGCTACAAC GCCGACGGCTCGCTCGAC CTGTGGTT GCAGCGCGAGGCGCCGGC CGCCGAGCAGCAGGG  54 203
JLK41_RS09275 1951569 .. 1951582 -  -3.8  -3.01712   GTTTGCCGTGGAACA               CCTG GTGAGG CAGG                GTCGGCTGGTTCCGG  44 245
JLK41_RS09245 1943350 .. 1943368 - -14.6  -4.98531   TCGCCAAAGCAAAAA             GGCCACTC ATT GAGTGGCC             TTTTCGTGAAGCTGG 100 38
JLK41_RS09240 1943158 .. 1943176 - -14.6  -4.98531   GCCGGAAACGAAAAA             GGCCACTC GAT GAGTGGCC             TTTTTCTGAAGGTGG 100 38
JLK41_RS09235 1942300 .. 1942323 - -14.6  -4.46615   GACTAGGAATGAAAA          GGCCTGGACA GCTA TGCCCAGGCC           TTTTTTGGCTTACAG 100 208
JLK41_RS09225 NONE
JLK41_RS09220 1939461 .. 1939516 - -13.5  -3.14234   CACCAACGGAATAGA TATTAGGCGCATTGCGCCTATGT GTAAAGCATT ATTTAGGCGCAATGCGCCTATTA TTTGGGCGCGCCCGT  78 370
JLK41_RS09210 1938166 .. 1938189 - -15.2  -2.65298   GTCATTGAGCAGAAT          GCCGCGCTGG CGGA CCTGCGCGGC           GCGGCGCAAGCGCGT  71 476
JLK41_RS09020 NONE
JLK41_RS09015 NONE
JLK41_RS09010 1907300 .. 1907323 -  -9.7  -2.88887   GGCAAATAAAACGTA          TCGTTGTTG TTATGT CAACAACGA           ATTGTTGTATTGCGA  59 49
JLK41_RS09005 NONE
JLK41_RS09000 NONE
JLK41_RS08995 NONE
JLK41_RS08990 NONE
JLK41_RS08985 NONE
JLK41_RS08980 NONE
JLK41_RS08975 NONE
JLK41_RS08970 NONE
JLK41_RS08965 NONE
JLK41_RS08960 NONE
JLK41_RS08950 1901013 .. 1901031 -  -5.3  -2.58677   CAGATAATCAGGAAG            CTCAG-GG ACGC CCACTGAG             GGGGGCGTATACCCC  46 309
JLK41_RS08940 NONE
JLK41_RS08935 1899049 .. 1899066 -  -3.3  -2.90763   TCTACAGCGGATACA             GGCTGAG GTGA CCCAGCT              GGAGCGTGAACAGGC  41 315
        rimO 1896356 .. 1896373 - -14.1   -5.4433   AGATAGAAAGAAAAA             GCCCCGC CGGA GCGGGGC              TTGCAGGCAGTAGGC 100 41
JLK41_RS08920 NONE
JLK41_RS08915 NONE
        tsaA 1894550 .. 1894571 -  -4.4  -4.28548   ACGGATGCATGAAAA           GGCCTC GCAGGATATT GAGGCC            TTCACCCTAGGGCGT  65 96
JLK41_RS08905 1893436 .. 1893451 -  -6.8  -3.03124   TGCTATTGCTCAAGA              CCAGAC TCAA GCCTGG               CCGGTTCGACGCGTT  51 345
JLK41_RS08895 1892447 .. 1892496 -  -4.8  -3.29471   CGCCGAGCAGACCAA CCTGCTGGCGCTCA-ATGCCGCC ATCGA GGCGGCGCGTGCCGGCGAGCAGG GGCGCGGTTTCGCGG  49 468
JLK41_RS08850 1882363 .. 1882390 -  -6.2  -2.70932   GCGCGGCTCGAATCA        CGTAGCC-CGGAT ACA ATCCGGGGCGCCG        TGCAGGCGGATACCC  46 431
JLK41_RS08815 1875405 .. 1875420 -  -3.2  -3.53012   GTTCTCCGGGGCAAA              TGCGAG GGTG CTGGCA               GTTTAGGTCGCGCTG  49 77
JLK41_RS08810 NONE
JLK41_RS08805 1873065 .. 1873079 -  -2.7  -2.97436   GATACATCCATAAAT               CGTGC GCGTA GCCCG               GATGCAATCCGGGGG  40 328
JLK41_RS08735 1861440 .. 1861454 -  -8.5  -5.64274   GCAGGCATAAAAAAA               CCGGC TCAAG GCCGG               TTTTTTTCATGGGTT 100 45
JLK41_RS08710 1855431 .. 1855452 - -15.9  -4.34402   TCCGCCATACCAAAA           GGGCCTGCA GCGA TGCAGGCCC            TTTTTCTTTGCGCGT 100 40
JLK41_RS08560 NONE
        gspD 1825483 .. 1825505 -  -2.7  -3.14344   CATCGCCTGGAGCAA          TGGCGTGTGG GTGG CCA-ACGGCA           ATCTGGCGATTCGTC  44 343
JLK41_RS08540 NONE
JLK41_RS08530 1821067 .. 1821094 -  -3.4  -3.02144   TCACTGTCGTGAAGA        CTGTGC-GCCA GGGCGAA TGGCCGCACTG        CGACGATGTCTTCAC  43 37
JLK41_RS08525 1820137 .. 1820162 - -19.1  -2.78384   GCGCCTGCGAGCAGA         CAGTGCCGGTC GTAT GACCGGCACTG          TTCATCTGACGGCCA  88 69
JLK41_RS08510 1817838 .. 1817861 -  -8.1  -3.01745   GGTTCAAGAAGGACA          GTGCCGATG TACGTG CCTCGGCAC           GCGTCGAGCAGGTCA  53 196
JLK41_RS08495 1813168 .. 1813186 -  -4.4  -2.71364   CGAGCGGCGCAACGA             CGGGCGCA TGG TGGGCACG             CTGGCCGTGTTCGGC  43 363
JLK41_RS08450 1805897 .. 1805922 -  -8.3  -6.02914   GCCAGACAAAAAAAA         CCCGGACTC TGGGGGAT GAATCCGGG          TCAAGACCATTAGGA 100 202
         maf 1794558 .. 1794579 -  -5.1  -3.01924   CACGCTTCTGGAAGA           CCGTGC-TGG AAA CCACGCACCG           TCAGTTCATCGACAG  47 374
         rne 1788602 .. 1788621 - -13.6  -4.80882   AGCGGACATGAAAAA            GGGGATGC CTAG GCATCCCC             TTTTTGCGTACCGCC 100 47
JLK41_RS08315 NONE
JLK41_RS08310 NONE
JLK41_RS08305 1779123 .. 1779142 -    -7  -3.28712   GGTGGTCGCCGACAA            GGGCGGCG ATAT CGCCATCC             TGCGTACGCTGGGCG  54 365
JLK41_RS08285 NONE
JLK41_RS08280 NONE
JLK41_RS08275 1774364 .. 1774379 -  -7.5  -5.30155   GCAGCAACGAAAAAA              CCGGC TCATGG GCCGG               TTTTTTCATGTCGGT  93 78
         mfd NONE
JLK41_RS08215 1759668 .. 1759684 - -15.1  -5.26875   GCTGCAATGAAAAAA              GGGCCGC TCA GCGGCCC              TTTTGCGTCATGCCT 100 41
        lexA NONE
JLK41_RS08185 1755237 .. 1755269 - -22.1  -3.40073   ACGGCGATGAATCAA      CGAAAACGGGGCTCC AGT GGAGCCCCGTTTGCG      TTTCTGGGAAGCGTC 100 39
JLK41_RS08150 1746441 .. 1746460 - -11.4  -5.48213   CAGGGAAAAGAAAAA            GCCCAGTG CGAG CACCGGGC             GGAGGTGGCCAGGCA 100 58
JLK41_RS08145 1745547 .. 1745563 -  -2.2  -3.61398   GCCGTTCGCCAACAA              CCAGGA GTTCA TCCTGC              GCGCGGTGTCGCTCT  48 361
JLK41_RS08130 1740972 .. 1740994 -  -5.4  -3.61715   GAGGTGCTGGAATAA           GCCGCAGGCC ATG AGCCTCGGGC           TGCAAGCCGCCGCGC  57 77
JLK41_RS08110 1736790 .. 1736801 -  -5.8  -3.92373   GAGCGCATCGAGAAA                CGTG CCGG CACG                 CCGATCCGGCGCCTG  63 395
JLK41_RS08090 1730901 .. 1730922 -  -2.1  -3.28712   GGCGGCTGCGCAGAA           GCTGGAACG GGCA CGCGCCATC            CTGCGCGAACACGGC  44 211
JLK41_RS08050 NONE
JLK41_RS08045 1723676 .. 1723692 - -10.1  -2.57132   TCGCGCTTCCAGAAT              TCCGGGA ATG CCCCGGA              TGAACAACCTACTGA  60 51
JLK41_RS08040 1722233 .. 1722257 - -17.1  -2.74523   CCACCGGCAAGAGTA          GCCTCGGCCTG GCG CTGGCCGAGGC          GCTGGGTACGCGCCA  80 455
JLK41_RS08025 1719903 .. 1719922 -    -7  -3.83026   TTGTCCCAGACGAAA            CGCAGCCC GACC AGGCAGCG             GTTGGCTTGGGCGGC  63 294
JLK41_RS08015 NONE
JLK41_RS08010 1717491 .. 1717511 -  -3.9  -3.05844   TGTTCCAGTCCAACA            GCGGCAC CTTGGCC GTGCTGC            GCGATATCGCCCTGA  44 213
JLK41_RS07995 1714203 .. 1714218 -  -4.6  -2.87564   CCAGCGGTGGACAGA              TCGTGG TCAC CCGCGA               TTTCGGGATGATGGG  44 321
JLK41_RS07985 1713558 .. 1713600 - -24.8  -3.60792   TCTGCAAGGCTGAAA CGGCCGCTGCCCCGGACGAG CGA CTCGGCCGGGGCAGCGTGCG TGCAACAGGGGATCA 100 38
JLK41_RS07975 NONE
JLK41_RS07970 NONE
JLK41_RS07965 1710161 .. 1710186 - -16.2  -3.53811   CTGATGCCGCCCAAA         CGGCGCCTGA CCTCGC TCAGGCGCCG          CGCTCCGCAGGCTAC  93 37
JLK41_RS07950 NONE
JLK41_RS07920 1700891 .. 1700922 - -12.2  -2.57132   GGTGGTTTCGACAAC      CCGCTGGCG-CGGGC GTT GCCCGGCGCCATCGT      CAAACCCCTGCGCGA  64 521
JLK41_RS07910 NONE
        grxC 1699647 .. 1699672 - -19.1  -3.39803   GACGGAGATGCAGAA         TGCGCCGCAAG AGGG CTTGCGGCGCA          TTCCGGGTCAGGCCT  95 33
JLK41_RS07900 1697327 .. 1697364 -  -8.4  -2.62184   TGCGTGCGGACATGA  GCGACCTGCTCGAGGCGC TGCT GC-CCTCGGCCAGG-CGC   AACTACGACCTGACG  52 410
JLK41_RS07890 NONE
JLK41_RS07885 NONE
JLK41_RS07880 NONE
        arsH NONE
JLK41_RS07870 1692513 .. 1692540 -  -2.7  -2.52015   CTTACATCCACCAAC        CGGTGGATC GGTGAAGCGT GATCCACCC         TACGGCAGTACCTTC  37 116
JLK41_RS07825 NONE
JLK41_RS07820 1679839 .. 1679854 -  -4.6  -3.16191   CGACATTCGCAGCAA              CTTCGC CATC GCGACG               GTCAAGGATCAGACC  47 191
JLK41_RS07810 1678652 .. 1678678 -   -18  -4.52589   GGCGGCGATAGAAAA         GGGGGCAGACTG AAC CGGTCTGCCCCC         TTTTTCGTTGCGCAG 100 144
JLK41_RS07800 1676177 .. 1676192 -  -2.5  -3.73775   TCCACTGCCACGAAA              GAGCG GCCTGA CACTC               ACGCCTGAGCGGGCA  51 310
JLK41_RS07785 NONE
JLK41_RS07780 1672291 .. 1672310 - -10.7  -2.57344   GACCGTTTGCAGAAT            GCCACGG GCGAGG CCGTGGC             GGCGATGCAGCGGGC  59 336
JLK41_RS07760 1665667 .. 1665678 -  -4.4  -3.14344   TACCTGGGTCATGAA                CACT CCTG AGTG                 GGCTTGCGACCGTGG  48 7
JLK41_RS07755 1665152 .. 1665181 -   -15  -4.78237   GAGTGTAGAACAAAA       GTGGTGCGCGGC GCTGCT GCCGCGCACCAG        TGTGCAGCGGATCAG 100 37
        codB NONE
JLK41_RS07745 NONE
        codA 1660738 .. 1660758 -  -3.1  -3.73775   CCTATTTCGAGGAAA            CCAAGCTGC CGC GCATCCAGG            TCGGCGCGCCGGTGG  53 513
JLK41_RS07720 1656739 .. 1656751 -  -3.3  -3.14564   GCAGTCGTCGATCAA                TGGCC ATC GGGCA                CCTCCAGTCCATGGG  45 9
JLK41_RS07715 NONE
JLK41_RS07710 NONE
JLK41_RS07705 1653537 .. 1653553 -  -6.5  -3.04501   ATCAAGTGGCGAAGA              CGCGC CAAGCCT GCGCG              CCGCGCCTGAATCTG  49 242
        rapA NONE
JLK41_RS07675 1647270 .. 1647295 -    -4  -4.13945   ACGGGTAGCGGAAAA         GGCCGGCATTT TAGCC AAGTGC-GGCC         CAGCCGTCAGGGCTT  59 66
        cmoA NONE
        cmoB 1645274 .. 1645285 -  -3.6  -3.45737   GAACCATCACGACAA                GCCG CGCC CAGC                 CATGCCCGAGTTCTA  49 276
JLK41_RS07655 1643721 .. 1643763 -  -7.4  -3.53012   GCCTGGTGCCGGAAA CCCGCCAGGAGCTGACCACC GAA GGCGGCCTGGACGTGGCCGG GCAGGAGGCGCGCAT  60 508
        nadB 1631407 .. 1631431 -  -7.8  -2.88544   TGTCATCGCCACAGA         GCGTCGTCGGC GTGC GCCG-CGATGC          ATTCGGCTGGTCGTT  52 217
JLK41_RS07575 1629838 .. 1629855 -  -3.3  -4.25104   GCTTGCTCATCAAAA             GGCTCTC TTAG GCGAACC              GGTGTGGCGCCGGGA  62 48
JLK41_RS07570 NONE
JLK41_RS07565 1627720 .. 1627757 -  -6.1  -3.64703   TGGCGCGGATCGAAA   GTGGTGCGC-GCGCCATC ACC GAGGGCGGTGCGCAGCGC   ATCGATCTCAGCCAG  59 446
JLK41_RS07550 NONE
JLK41_RS07545 NONE
JLK41_RS07540 NONE
JLK41_RS07535 1621533 .. 1621554 -  -2.8   -2.7035   GTTACCCAGAGATCA           CGCGGCAG CGGCAT CAGCCCCG            GCCTTGATCTGTTGG  39 1
JLK41_RS07530 1620375 .. 1620396 - -11.5  -2.82635   AGGCGGATGACTACA           GCCAGCCGC TCAA GCTGCTGGC            CCGTGGTCTGCGTTT  63 153
JLK41_RS07520 1618733 .. 1618782 - -23.2  -2.93623   TGTGGCAAAAGATCA CACGG--GCTGACGGCTGAGC-CAG GAC CTGCGCTCAGCCGTCAGCATCCGTG CCGCAGGCGGTGCGA 100 41
         gap 1617566 .. 1617599 -  -3.7  -2.63596   GGCGATTGTACAGGA     TCGCCGTGTGCCGGTC GTC GCCCGGCA-ACGCCAT     GGACGCAGCGGCGCA  40 57
JLK41_RS07510 NONE
JLK41_RS07435 1601786 .. 1601800 -  -4.9  -2.75712   TGACCGACTCAACTA               CCGCC TGCAG GGCGA               GGCCTGGATTCGCGA  43 181
JLK41_RS07410 1595860 .. 1595870 -  -2.4  -3.51232   TGGGCGGGAAATCAA                 GCTG AAA CTGC                 ACAAGCTGACGTTCG  48 467
JLK41_RS07385 NONE
JLK41_RS07380 1592393 .. 1592405 -  -2.6  -4.07975   CAACTCAAGCAGAAA                GCGC GGAGA ACGC                CAGTCAGGCGCTCAG  57 29
JLK41_RS07375 1591199 .. 1591220 - -12.9  -4.34737   GCAGGAATGAAGAAA           TGGGCCCGC ATGT GCGGGCCCT            GTCGTTTCAGCCAGC 100 32
JLK41_RS07365 NONE
JLK41_RS07360 NONE
JLK41_RS07355 1589234 .. 1589246 -  -6.9  -3.46068   TCGCCAAGGTAAAGA                GGCCG TTG CGACC                TGGCAAGAGGGCTCA  58 38
JLK41_RS07350 1586552 .. 1586566 - -12.8  -5.10933   GCAGGCAAAAGAAAA               GGCGCC AGG GGCGCC               TCAAATCGATGATCT 100 109
JLK41_RS07345 1584720 .. 1584739 -    -5  -3.04144   CGTCGAGCCGGAAGA            CGACGA CCTGCGTT TCGTCG             ACCTGCAGGCGGTCC  45 409
JLK41_RS07335 NONE
        pncB NONE
        nadE 1581542 .. 1581559 - -14.1   -4.7497   CGCAGGCATGAAAAA             GCCGGGC GCTT GCCCGGC              TTTTTTCTGCCCGTT 100 43
JLK41_RS07315 1580397 .. 1580415 - -13.1  -5.30686   AACAGGCACAAAAAA             GCCCCGC ACTAG GCGGGGC             TTTTCAGCAGCTTAA 100 50
        metG NONE
JLK41_RS07300 1575923 .. 1575934 -  -7.2  -3.48276   GCCCTGGCCATACAA                GCCG CATG CGGC                 GAATCGCCTGCACTT  58 65
        rsxA NONE
        rsxB NONE
        rsxC NONE
JLK41_RS07280 NONE
        rsxG NONE
JLK41_RS07270 NONE
         nth NONE
JLK41_RS07260 1568472 .. 1568489 - -14.1  -4.00042   GCGTCGATGAAAGAA             GCCCCGC GTCT GCGGGGC              TTTTTCGTGCGGCTT  95 40
        pyrC NONE
         rnt 1563722 .. 1563735 -  -9.5   -5.1675   CCAGGCATGAAAAAA               CCGGC AGGT GCCGG                TTTTTTTGATACGCG 100 55
JLK41_RS07230 1563325 .. 1563342 -    -7  -5.26918   ACAGGCCATAAAAAA             CCGGAT GCTGAG ATCCGG              TTCTTTGTGTGCGGG  93 48
JLK41_RS07215 1561017 .. 1561047 - -22.8  -4.15788   AATTCTTCTAATAAA       CAAAGCCCACTGCA GGC TGCAGTGGGCTTTG       GGTTCAGGCGGGAAG 100 42
        livH NONE
JLK41_RS07205 NONE
        livG NONE
JLK41_RS07195 1557252 .. 1557267 - -11.8   -5.1675   CCAGGCATGAAAAAA              CCGCCC CGGA GGGCGG               TTTCGGGTACGGCAG 100 47
JLK41_RS07190 1556074 .. 1556098 - -10.7  -2.81547   TGCGCAGAGCAAGCA          GCGCCTGATCG ACC CGACCAAGCAC          CTGGTACTGCGCTCG  61 180
JLK41_RS07180 NONE
JLK41_RS07175 NONE
JLK41_RS07165 NONE
JLK41_RS07160 NONE
JLK41_RS07155 NONE
JLK41_RS07150 1548186 .. 1548198 -  -3.3  -3.60098   ATGGTGGATGTGAAA                GGCGA CAT CCACC                CTACGAGCTATTTGT  51 45
JLK41_RS07145 NONE
        mmsB 1545576 .. 1545601 - -12.5  -3.14211   ATCTGGCTGCAGCAA         TGCCCCGGCGA ATCG CCGCTGGGGCA          GGGGCACGCCAGTCG  74 451
JLK41_RS07125 1542608 .. 1542624 - -15.1  -3.41602   GCCACGCCATGACAA              GCCGCGC GAC GCGCGGC              GCCAGGAGCAGCGTG  80 154
JLK41_RS07105 1540398 .. 1540438 - -13.1  -3.05596   GATGTCCTTAGCGAA  CATCGTGCCATGCGCCGCA AGG TGCGGCGCTTGGCGCTGCG  CTGCGGCTCGTCGAG  72 96
JLK41_RS07100 NONE
JLK41_RS07095 1538303 .. 1538321 -  -5.8  -3.05816   GTAGCCCGGATGCAA             TCCGGGGC GAT GTCCCGGT             GAATCCCCGGATTTC  49 90
JLK41_RS07080 1534398 .. 1534412 -  -5.6  -3.73072   AACCTCGGGATCAAA               GCCGGA GCG TCAGGC               GCCAGAGGGCGCCTG  60 64
JLK41_RS07075 NONE
JLK41_RS07070 1532956 .. 1532993 -    -7  -2.66316   CGGTTGATGACATGA   CCCTCTCCC-CCGGC CCCTCTCCC GCAAGCGGGAGAGGG   GAGTGCATCAATCAA  49 37
         uca 1529145 .. 1529168 - -16.8  -3.01712   GGTTGTGGTGGAAGA          CCTCCCACAG GGCG CTGTGGGAGG           GGCTTCAGAGGCGAA  87 43
JLK41_RS07060 NONE
JLK41_RS07055 NONE
JLK41_RS07050 1526195 .. 1526213 -  -6.6  -2.57244   CCAGGCAGGAATCCA             GTCGGCGC AGC GCGCCAAT             AACTGAAAAAAACAC  49 190
JLK41_RS07045 1525051 .. 1525086 -    -9  -3.65294   CGGCACAGAAATGAA    GCGCGAAGC-GTTGC GACAGAT GCAGCCGCTCCGCGC    TTGCGGGCCGTCATA  68 36
JLK41_RS07040 1524895 .. 1524931 - -13.2  -5.37043   ACGGGACACAAAAAA   CGA-AAAAGCCCCGTCA GTGA TGACGGGGCTTTTCTTG    ACTGTCTGGAGCGGG 100 31
JLK41_RS07035 1523343 .. 1523356 -  -5.2  -2.87132   GCTTGGCCGTACACA               GGCC TGGGGC GGCC                TAGCAATTCATTCTG  45 286
JLK41_RS07030 1521673 .. 1521684 -  -4.4   -2.6621   ATCATATCGAAACAG                CAGT GACG ACTG                 GCAACGTCGAATATC  43 140
JLK41_RS07025 1521306 .. 1521321 -  -3.2  -2.57132   CCTGGGGGGCAGAAG              TTCCCA TGAA TGGGGA               GGGCGGTCGCTTCTC  40 96
JLK41_RS07020 1519816 .. 1519839 - -11.6  -4.25104   GGCTGGCGAGCAAAA          CCGCCACGGC AGAT GCCGCTGCGG           GTTCGCGGCCACTTG  89 301
JLK41_RS07015 NONE
JLK41_RS07010 1517052 .. 1517085 -  -4.6  -2.76737   GATGAAGGTCGAAAT     GGGC-GAACAGGC GGCGATTAT GCCTGCTCCACCC     GTGCTGAGGAAAAGG  43 378
JLK41_RS07000 1515283 .. 1515329 -  -5.7  -3.28712   CGCCGGCTCCGACAA CCACGCGGACCACCCGCAGCCGC TGG GCGGTGGCGG-TG-CACGCGTTG CCTGCGGGGTGATCA  51 211
        gcvH NONE
        gcvP 1511196 .. 1511228 -   -20  -3.05596   GAGGCTGGCATTGAA     CCGTCCCCTCTCCCG CAAG CGGGAGAGGGGA-GG      TTCATTACGCGTCCT  95 30
JLK41_RS06980 NONE
        gcvT 1508582 .. 1508603 -  -8.7  -3.53444   GTAGGGCGGGTGAAA           CCCGCCA CATGCACC TGGCGGG            CTCTCCCTTTCTGCG  66 83
        soxR 1507412 .. 1507427 -  -3.9  -3.14564   CGAGCTGTTCAGCAA              CCGGC GCAACT GCCAG               GACGACTAGTGCGCT  45 53
JLK41_RS06955 1505271 .. 1505289 - -11.7  -5.66868   AATGAATGAAAAAAA             GCCCGTC ACGAG GACGGGC             GCAAAGTGCCGTAAA 100 79
JLK41_RS06945 1502945 .. 1502957 -  -3.3  -3.10622   AAGACGCACTGAATA                GCTGG ACC CAAGC                CTGCCGCAGCAAGGA  44 468
JLK41_RS06920 1499342 .. 1499378 -  -3.8  -4.17089   GGGAAATCCTGAAAA   CGATGGAAGC-GCTT-AG CGG CTGAAGCCGCTCCCACAG   GTACTGCCCGAGGGA  62 158
JLK41_RS06915 NONE
JLK41_RS06910 NONE
JLK41_RS06905 NONE
JLK41_RS06900 NONE
JLK41_RS06895 1494828 .. 1494856 -  -2.9  -3.14132   CCTGGCGCTGATCAA        GCAGCGCGCCGGC AGC GCCAAGGGGCTGG        CCAGCTGGGCCGAGC  44 425
JLK41_RS06885 1493237 .. 1493254 - -12.7  -4.05446   CGCTGGAACGACAAA             GGCCACC CTCG GGTGGCC              TTTGTCGTCATGGGC  89 177
JLK41_RS06865 1487437 .. 1487460 -   -16  -3.51232   TCTGCCGGAAACGAA          GAGGCCGGCT TTTT AGCCGGCCCC           TGCATTTCACGACAG  93 77
JLK41_RS06860 1485645 .. 1485671 -  -2.9  -2.78596   CACTGGCGCAGGAGA        CGCAGGCTTCAG CTGG CTGAT-CCGGCG         AGGATGTGCAGGCTG  39 7
        rdgC 1481214 .. 1481249 -  -9.6  -3.05844   TCCTTGACCTGAACA    GGGGCGGTGGGCAACGC GAA GCGT-GTCCACCGCCTG    TCCGGGTGGTGGATG  60 69
         gap NONE
JLK41_RS06805 1477603 .. 1477618 -    -6  -3.71998   CACCCAGGAACAGAA              CCGCGC CGAT GCGCTG               GAGCGACTGCTCGAA  59 184
JLK41_RS06795 1476111 .. 1476131 -  -3.1   -3.9243   GAAGCGGCGAAACAA            CATTGCAGG CAT CCTGCCTCG            ACATGGAGGGACGCC  56 53
JLK41_RS06790 1473957 .. 1473997 -  -8.8  -4.21351   AAAGAGCCGAAGAAA GCCGCCGCGCCCAAG-CGC AAGA GCGGCCCGCGCCCGGCGGG  CAAACCCTCCGCGCT  76 306
JLK41_RS06780 NONE
JLK41_RS06775 1471440 .. 1471465 - -11.2  -4.07568   GTCTGCTGCGCAAAA         CGCCGGCCTGA GGTGA TCAGGCCG-CG         TTGATGCGCGAGGGC  84 16
JLK41_RS06750 NONE
JLK41_RS06745 NONE
JLK41_RS06740 1466070 .. 1466100 - -24.2  -3.53091   AGCGCCTCTGGCAAA       CGAAAAAGCCGCCC ATC GGGCGGCTTTTTCG       TTGGTGCGCGGCTTA 100 38
JLK41_RS06730 1464108 .. 1464123 -  -4.6  -3.20723   CGCCTACGAACTGAA              CGTCTC CGAG GCGACG               GTCAAGGCGCATGTC  47 137
JLK41_RS06720 1462425 .. 1462438 -  -9.5  -3.05816   CTACCTGGCAGCCAA               GCGGC GCTT GCCGC                TCGACCTCAATGACG  57 32
JLK41_RS06710 1460652 .. 1460668 -    -8  -2.79183   CGGAGCTCTACGACA              TGCTGC AGCAG GCAGCA              CGCACCAACCAGCTG  51 174
JLK41_RS06700 NONE
JLK41_RS06695 1457678 .. 1457695 - -12.7  -5.26875   CTGCCAACGAAAAAA             GCCCAGC CAAT GCTGGGC              TTTTTGCTGTGTGTC 100 59
JLK41_RS06610 1442892 .. 1442948 - -11.6  -2.63715   ATTTATGGGAGAGGA GCTGGGGGAGAGGGCTGAAA-CTGCCGC AAA ACGGCCGGTTTCC-CCCTCTCCCCAAGG GGGGGGGCGTGGGGG  64 96
JLK41_RS06605 1442179 .. 1442196 - -14.1   -4.4078   CGTGCCTAATGAAAA             GGCCCGG ATTA CCGGGCC              TCAGGGATGTTCAGG 100 36
JLK41_RS06600 1440972 .. 1441011 -  -8.5  -3.14132   GCGCCTGTGGAGCAA  GGTCGGCGCCGCCGCA GGGTGATAA TGCGGCGT-GCCGTCC  TATTTAACAGCAAAG  57 57
JLK41_RS06595 1440233 .. 1440248 - -11.8  -4.81551   TACTGATATGAAAAA              GCCCGG TTTC CCGGGC               TTTTTCTTGTCGTCT 100 41
JLK41_RS06580 1437633 .. 1437656 - -16.8  -4.82901   TCCTGCCCATAAAAA          GAAACCCGGC CTAG GCCGGGTTTC           TTTGTTGTCGAATCA 100 49
JLK41_RS06570 NONE
JLK41_RS06565 1434031 .. 1434050 -  -7.8  -2.75992   CGGCATCGAATATGA            CCTGCTGC CCTG GCAGCAGC             GTGCTGCGATGCCGT  51 342
JLK41_RS06550 1429432 .. 1429460 -  -6.5  -5.33405   CTCACGAAAGAAAAA        CGCTGGTGCTGCC ATG GACTGCACAGGCG        CTGCCGGGTTTCCTG  95 69
JLK41_RS06545 1428462 .. 1428485 -    -8  -3.01712   CCTTCCTGCGCAAGA          CGCCCTGGGC CCGT GCCAAGGTCG           AGCAGCTCTACCTCC  53 64
JLK41_RS06525 1424424 .. 1424442 - -13.1   -4.8622   GCCTGTAACGAAAAA             GCCCGGC ACTGG GCCGGGC             TTTCTTCTGCGCTTG 100 47
JLK41_RS06485 1418038 .. 1418063 -  -2.5  -3.25719   TTATGACAGCAGCAA         GTCGGGCAAAGT GCC ACGTTGCC-GTC         AACAAGATACATCGA  43 107
JLK41_RS06480 NONE
JLK41_RS06475 1415887 .. 1415899 -  -3.4  -3.34398   TTCCCGCGCTAAATA                TCGA ACTGA TCGA                TGTTTGGCGCGGGTA  47 43
JLK41_RS06470 1414794 .. 1414806 -  -6.9  -3.13403   CGGGGGCGACCAAGA                CCAGC GGC GCCGG                GGTGCTCAGCTACCT  52 165
        minC 1411787 .. 1411800 -  -3.7  -4.07103   AAAAAAAGAAGATAA               CGCGG GAAT CCGTG                GCCATTTAAGGCTTC  59 84
        minD 1410932 .. 1410953 -  -8.1  -3.73068   GCGCGAACGCAAGAA           GTCGAAAAT ATTC ATTCTCGAC            CTCCAAATAGGCGCT  67 15
        minE 1410653 .. 1410674 - -17.3   -3.6053   GTTGCTACAAATGAA           CACGGCGGC CGAA GCCGCCGTG            ATCGCCGCCGGTGTC 100 43
JLK41_RS06440 NONE
JLK41_RS06435 NONE
JLK41_RS06430 1407832 .. 1407844 -  -3.3   -3.8709   AAAGCTGGCGAGAAA                GCGGA GTT TACGC                GTTGTAAATGGGCAT  56 111
        lpcA 1407163 .. 1407182 -  -4.8  -2.86164   GCGGGAATGACGACA            CGCCGGGG CTTG CTCAGGCG             TAGTTCTGCGGGCTC  45 19
JLK41_RS06415 NONE
         lon 1402881 .. 1402892 -  -2.2  -3.32844   GGTTGCACGCGACAA                GC-CG AAG CGCGC                GCCGCTCTTTCCTGC  44 64
JLK41_RS06405 1402263 .. 1402284 -  -8.7  -3.53444   GTAGGGCGGCTGAAA           CCCGCCA TGAATAGG TGGCGGG            TTGCACCCGCCCTAC  66 153
JLK41_RS06360 1390525 .. 1390545 -  -2.5  -3.72576   CCGGTGTGGATGAAA            GCCGC TTGAGTCAGTT GCGGC            CGAGGCTGGGACGTT  52 15
JLK41_RS06355 1389486 .. 1389508 -  -7.6  -3.04144   TTCTGAGGTGCAACA           CCGGCCGG ATCGACA CGGGCCGG           TGTTGCGTTAGGGCT  56 40
JLK41_RS06350 NONE
JLK41_RS06345 1387364 .. 1387401 - -26.5  -2.71011   AGCGCCGCTGAACGA   CAGAAGGGGTCGCCAAC CCGC GTCGGCGACCCCTTCTG    TGCCCCTCGCAGGCG 100 41
JLK41_RS06335 1384941 .. 1384961 -    -6  -2.98942   ACCTGCGCATACAGA            CGCTGGCC GAGCA GGCCGGCA            TGAGCCTGGCGCCGC  49 259
JLK41_RS06325 1382063 .. 1382092 -  -9.1  -3.02043   AAGTTTGCTCGAACA       GTTGGCCGGCGCA TCCC TGCGCCGGCATGC        GGGAAGGGCTCAGGA  60 35
JLK41_RS06320 1380788 .. 1380804 -  -2.1  -3.47307   CGAACAGCATTACAA              CGGAGAC GAA GTCACTG              CGCGGTGGCGTCAGC  47 20
JLK41_RS06315 NONE
JLK41_RS06310 1377080 .. 1377107 - -24.2  -3.90112   GCGGCTGCAACGAAA        CGGGGCGCCCTG GTGA CAGGGCGCCCCG         TTTGCGTTTTGGCGC 100 65
JLK41_RS06300 NONE
JLK41_RS06295 NONE
JLK41_RS06290 1370457 .. 1370484 -  -3.3  -3.02511   TCGAGTTGCCCAATA        CCCTGGGCATG GTGATG CACGCCGATGG         CGGCTACCTCGGCTC  42 451
JLK41_RS06255 1363157 .. 1363199 -  -8.3  -2.57963   GGCAGAACGATGAAG TGCTGGAGGCCCTGCT-GGC CGAG GCCGAGCAGGGCCTGGTGCG GGTGCGCCAGGCGCA  52 154
JLK41_RS06245 1360766 .. 1360809 - -10.9  -2.98493   TCGAGGAGGAAATCA CGCG-GCTGCGGC-GGGCCTG GGGG CTGGCCCAGCAGCAGGACGCG CTGGGCGACCTGCTC  62 241
JLK41_RS06235 1357158 .. 1357176 - -10.2  -5.08824   GGGTCAGTCAAAAAA             GTGGAGGC CGG GCCTCCGC             GCAGCGACGAGATAA 100 509
JLK41_RS06230 NONE
JLK41_RS06225 NONE
JLK41_RS06220 NONE
        rtcA 1352426 .. 1352444 -  -4.5  -3.97947   TGCAGCGACGAGAAA             CATGAGC GTGCG GCGCATG             ATGGCTCTCCTGGAA  59 103
JLK41_RS06210 1351770 .. 1351791 -  -7.3  -2.78384   CGCTGGGCGACGAGA           GCCATGAGGC CGC GCCTCA-GAC           CGTGCAGAGTCTGGT  48 432
        ssrA 1348722 .. 1348750 -  -7.4  -4.89567   CCTGAAAACACAAAA        CCCCTGAAATTC TCTAG GAAAATCAGGGG        TTTATGCTTGTTTCA  88 43
JLK41_RS06195 1347783 .. 1347812 -  -2.2  -4.21194   CGTGACCACTGAAAA      CGTCAT-G-GCCAG TTCA CTGGCGCTATCACG       TCGTTTCGTCGAGCG  60 255
JLK41_RS06160 NONE
JLK41_RS06135 1334619 .. 1334645 -  -4.2  -2.71731   GGCACGCCTCAACGA         TGTCTGCCGGCG TAT CGCCGACATGCC         GTCCAAGCGCCTGGT  41 386
JLK41_RS06120 NONE
JLK41_RS06115 NONE
        hpaE 1330249 .. 1330268 -  -4.9  -3.18274   TCGAGGCTAAGGCAA            CGGTCGC TCAGGT GCGAACG             GCTTTTCAGAGGCCC  48 31
        hpaD NONE
JLK41_RS06100 NONE
        hpaH 1327723 .. 1327772 -  -6.7  -2.53581   GAGAGCTGCAAGGCA CAAGCTTCAAGCGGCAAGCGAAC GCTGCT GTT--CTTGTGGCTTGAAGCTTG CCGCTTGTGGCTTAG  48 37
        hpaI 1326877 .. 1326910 -  -3.9  -2.71712   CGTTCTCTTGCAAAT    GCTGGCGG-GGCG GGTCAGTAAA CGCCGCCGCCA-C     TGGTGGACGGTGCCG  41 6
JLK41_RS06085 1325354 .. 1325371 -  -8.4  -5.48825   GAGCACTCAAAAAAA             TGGCCC GGTCAG GGGCCA              TAAGGGTGACAAGCC 100 59
JLK41_RS06080 1324490 .. 1324507 -  -4.1  -3.67775   AGCCTGACGGAACAA             GGCGA GCAGTGTT TCGCC              TCGATGAGCGTCGAA  54 236
JLK41_RS06065 NONE
JLK41_RS06060 1321047 .. 1321066 -  -6.3  -2.56095   TTGAGAGGTAAGCGA            GGGCGCC GCGTCT GGCGCCG             GGGTGTCGTTAACGG  46 34
JLK41_RS06055 1320616 .. 1320655 - -17.8  -2.70932   GGCCTCGGGCAATGA  GCGGCGTG-GGGCGACGGC AGG GCCGCCGCCCGCACGCATC  AGGCGACGGCGTAGT  86 24
JLK41_RS06035 NONE
JLK41_RS06030 NONE
JLK41_RS06025 1314693 .. 1314719 - -14.5   -3.6682   CTCGATCGAGTGAAA        GCCCCTGTCACC GTCA GGTG-CAGGGGC         TTCTGTTTGCCGGTT  90 48
JLK41_RS06005 1309512 .. 1309538 - -10.8  -4.07859   GCAAGAAACAGGAAA         CGCCGCTTGC GTCGAGG GCGAGCGGCG         TTCTGCGGAGCATGG  80 47
JLK41_RS06000 1307240 .. 1307251 -  -5.8  -4.07568   CGGCTGTTGCGAAAA                CCAC GGGG GTGG                 CCCAGAGCTCGTTGT  65 485
JLK41_RS05975 NONE
JLK41_RS05970 NONE
JLK41_RS05965 NONE
JLK41_RS05960 NONE
JLK41_RS05955 1300086 .. 1300099 -  -4.5  -2.62184   CTGCCGGCGAGAGCA               GCAGA ACTT CCTGC                GGCGCGGCGAGCAAT  42 322
JLK41_RS05910 NONE
JLK41_RS05905 NONE
JLK41_RS05900 1288168 .. 1288184 - -12.3  -3.92869   CCATTGATCCATAAA              TGGTGCG TTT CGCACCA              TTTATAAAATATAAC  86 93
JLK41_RS05895 1287407 .. 1287418 -  -4.4  -3.44051   CCGTGAGGATGAGAA                TGAG ATGT CTCA                 GGCCCAGGGCGTGGG  52 74
JLK41_RS05890 1285267 .. 1285280 -  -5.2  -2.97188   CCAGAGCAGGAGAGA               GCCG AGTAGA CGGC                TGTCCCACGGGGTAT  45 307
JLK41_RS05790 NONE
JLK41_RS05785 1259898 .. 1259930 -  -3.5  -3.05844   GCTTCGACCGCAAGA     CGCTGTACAGCACCG GGGCT CGGGG-T-TACAGCG     ACTATCCGGCCTGGC  43 208
JLK41_RS05735 1248660 .. 1248677 -  -3.5  -2.80056   ACCAGCGAGCGAAAC             GA-AATGG CCG CCATTATC             CGGGTTTTCCGGGGG  41 109
JLK41_RS05730 NONE
JLK41_RS05725 1245486 .. 1245499 -  -2.3  -2.70932   CGTGTCGCTCAAGGA               CCTCG TCGA CGAGC                CATTGATCCTGGTGC  38 371
JLK41_RS05715 1243518 .. 1243530 -  -5.5  -3.09516   GGCTGCAGCAGGCAA                GCGAA TAG TCCGC                GCGGCAGGGCGTCAC  49 37
JLK41_RS05690 1238086 .. 1238100 -  -2.7  -3.61398   GCGGCTGCTGAAGAA               CTGCC TGCGT GGCCG               ACGGCGTTGAAAACG  49 134
JLK41_RS05685 1237351 .. 1237389 - -18.3  -4.87665   CGCCATGTAGAAAAA   CGTTCCGTAGACGCC GTGCGTGGT GGCGCCTACGGAACG   GTAGACAACTTAGAA 100 35
JLK41_RS05680 1235959 .. 1235977 -  -9.5  -4.01888   AGTGGATATGACAAA             GCCCGGC ACGAG GCCGAGC             TGTTTGACGTAGCCC  76 121
JLK41_RS05675 1234375 .. 1234390 -    -9  -2.72344   CGCGAGCCGGAACCA              GGCTGA AGGC TCAGCC               GATGAAGTAGAAGGC  57 20
JLK41_RS05655 1227353 .. 1227393 -  -5.3  -3.04144   TGCCCACCTGGAAGA TTCGTCGAGCGCTGCGCCG TGCGG CGGCGC-GCGG-CGTCGAG GTGCGCCTGCTGCTG  47 428
JLK41_RS05625 NONE
JLK41_RS05620 1221175 .. 1221187 -  -4.8  -2.87132   GCCTGCTGGTACAGA                TCGG TTCGC CCGA                GGGCGTGGTCGGCGA  44 196
JLK41_RS05610 1217559 .. 1217616 -  -4.5  -3.28791   AGCGTCGCCGCACAA GTGCCTCCCAGGCGGCCAGGCGCAGCGC TTG GCGATGCATCCG-CCGCTCAGGTCGCCC GGGCATGCAGGCCGC  49 15
JLK41_RS05600 NONE
JLK41_RS05595 1215381 .. 1215399 - -17.4  -3.39895   CGCCGGATGAACGAA             CGCCCCGC ATT GCGGGGCG             TTTTTCTTGGTCGCG  93 92
JLK41_RS05585 1213410 .. 1213437 -  -7.6  -3.31144   GGGGCAGGTTTACAA        CATCAGCAACGG TACG CCGGTGCCGCTG         TGGGACGTGGTCAAC  56 310
JLK41_RS05570 1211224 .. 1211236 -  -4.7  -2.62263   AGCTCTGCCACATCA                GGCGG ATT CCGGC                AGGGAGGACGCCGCC  43 10
JLK41_RS05565 NONE
JLK41_RS05560 1209601 .. 1209611 -  -2.4  -3.38378   GCACAGGCGAAAAAG                 CGCG TTC CGGG                 TGAATGACCCTTACC  44 36
JLK41_RS05555 1209275 .. 1209292 - -14.1  -3.34517   AGGTGGTGCTAAAGA             GGGCCGG CGTG CCGGCCC              GAGGGGCGCTGGCCA  81 80
JLK41_RS05550 1208651 .. 1208662 -  -4.4  -4.85599   TGCACGGTAGAAAAA                TTGC CTGG GCAA                 TCTTTGACGTCGCCT  78 373
        putA 1204462 .. 1204472 -    -4  -2.75268   CAATGATGGCGAAAT                 GAAA ACT TTTC                 GCATGCGTGGGGAGG  41 227
        arcD NONE
        arcA NONE
JLK41_RS05530 NONE
        arcC NONE
JLK41_RS05520 1198787 .. 1198809 -  -8.4  -3.36273   CCGGGCGAAGATCAA           CCACGAGACC GAA GGTTTCGTGA           AGATCATCGCCGATG  60 292
JLK41_RS05505 NONE
JLK41_RS05500 1195097 .. 1195138 -  -4.2  -2.60079   GCACGCTACAAGTGA CGGGGGT-GGCCGGGTGTC GGACT GGCGCCCGGCCAAGCCTCA TTCGCTCGGGCTGGC  43 23
JLK41_RS05490 1192983 .. 1193004 -  -5.8  -3.07935   ATGTCAGGCAGCTAA           GCACGTCA GGGCGG TGGCGTGC            ATTGGCGGAAGGTCG  49 83
JLK41_RS05485 1192083 .. 1192105 -  -7.6  -2.83964   CAGGATAGAAGACCA           CCGGGCGC GGCATTA GCTCCCGG           CGCGTTGCCGCGCAC  55 15
JLK41_RS05480 1191549 .. 1191584 - -10.2  -2.62184   GGCTGCCTGAGACCA    GCCCCTCGGCGCCTGC CTCA GTAGGCGCCTGGCGGC     TGTGGCCAGTTCAGG  60 7
JLK41_RS05470 NONE
JLK41_RS05465 1188627 .. 1188665 -  -4.5  -3.71848   CCGCCTGATGAACAA  GCTCTATCTGCGCAACCC GCGA GAGTGGCGCA-AGAGTGC   CTTCCCTGACGCCGC  55 514
JLK41_RS05440 1183529 .. 1183553 -    -2  -3.78775   TCGGTGACCAGGAAA         TGGCGCTCGCG ATTG CGCG-GCTGCA          CGGCCGTCCATTTCG  52 86
JLK41_RS05430 1182303 .. 1182313 -  -4.6  -3.29511   CTCATGGTGCTACAA                 CGCG TTG CGCA                 GGCTGAGTGGCTCGG  49 9
JLK41_RS05425 NONE
        phrB NONE
JLK41_RS05415 NONE
JLK41_RS05410 NONE
JLK41_RS05405 1177502 .. 1177519 -  -3.3  -2.78384   GCGCTGTGCATCACA             GCGTCTC TCCG AAGGCGC              GGGCCACACGCAGTG  41 3
JLK41_RS05400 NONE
JLK41_RS05395 NONE
JLK41_RS05390 1174806 .. 1174825 - -16.4  -4.34402   CGCTGCAGACGAAAA            GGCCGGGC AGAT GCCCGGCC             TTTTCGCTTCAGGGG 100 47
JLK41_RS05355 NONE
        lolB 1166363 .. 1166400 - -16.3  -3.73775   CGCATCGCGACTAAA   GCCGCTCCTGCAAAGAC CGCA GCCCCTGTAGGAGCGGC    TTTAGCCGCGAAATG  95 113
        ispE 1165400 .. 1165416 -  -7.3  -2.59564   CCTGTATCGTATAAC              CGAATGC TGA GCATTCA              CTTCTTGGCCAATGC  49 23
JLK41_RS05340 NONE
JLK41_RS05335 NONE
JLK41_RS05330 1164155 .. 1164173 - -13.1  -4.62069   GCGGTAGGGCAAAAA             GCCCCGC ACGAG GCGGGGC             GCTTAACGTCAGCGG 100 46
JLK41_RS05325 1163435 .. 1163462 - -12.6  -3.72576   GCCCTTTCGAGGAAA        TCGCCCGGCGTG ATCG CATGCCGGGCGG         GTTCCGCACTGCGAT  85 40
         pth NONE
        ychF 1161642 .. 1161684 - -20.6  -3.28924   GACGCCGGGCCATAA GCGCGAAGCCCCCAGCGG CGTGGAT CCGCTGGGGGCTTCGAGG GAGCGGGGCAGGCTC 100 39
JLK41_RS05295 1159676 .. 1159686 -  -8.2  -3.14211   AGCGTCTTGCAGTAA                 CGCC AGT GGCG                 AATGGGTGAAGGCTG  57 51
JLK41_RS05290 NONE
JLK41_RS05285 1158773 .. 1158794 - -14.5  -3.35912   CACCATATATATCAA           GGGGTTAGC GCAA GCTAACCCC            TTTTTTATTGGGCCG  86 73
JLK41_RS05275 1158261 .. 1158274 -  -3.9  -2.78463   AGCTTTTTCATCACA               TCATT CCTT AATGA                GGGATAGGTTCAGGG  41 35
JLK41_RS05270 1157762 .. 1157780 - -10.2  -2.77899   GTGCCTGAGGAATCA             GCGCCCAG ATG CTGGGGGC             ATTCCGTGCGCGCAG  61 55
JLK41_RS05255 1153914 .. 1153942 -  -4.4  -4.21194   CGGCATGACCGAAAA        GGCCCTGGCCAG GATCG CCGACGAGGCCC        GCGAGCGCTGGCCGC  66 448
        yaaA 1149853 .. 1149871 -  -3.1  -4.00124   TATCCGATAACTAAA             CAGCG TGATAAGTT CGCTG             GAAAGTTGGGACGAG  59 217
        algD NONE
        alg8 1146528 .. 1146540 -  -6.9  -2.63102   AGTACGGTCACACCA                GCGCC AGC AGCGC                GGCGATGAAGACGGA  49 5
JLK41_RS05210 NONE
        algK NONE
JLK41_RS05200 NONE
        algG NONE
JLK41_RS05190 NONE
JLK41_RS05185 1138304 .. 1138314 -  -4.6  -3.01712   GCTTCTCCGTGAACA                 GCCG GGG CAGC                 GCCCCCCTTTCCCCC  46 124
JLK41_RS05180 NONE
JLK41_RS05175 1135689 .. 1135710 - -11.5  -2.77899   TTGGGGGATGAATCA           GTGGCTGGC CGCA GCCAGCCCC            TGGCGCTCGCCGCCC  65 1
JLK41_RS05170 1134998 .. 1135023 -  -7.5  -2.57132   CTTGTTCTGCAGAAG         CCGTGGATGGC CTCA GCCATCGATGG          GGCGCTTGACCCAGA  49 12
JLK41_RS05165 1133352 .. 1133382 -  -2.5  -2.76964   CGACACCGAACAGCA       TGAGAACAGCCCT GATTG AAGTCTGCGCTCA       TCGTACACAAGCTGT  39 120
JLK41_RS05160 1132900 .. 1132912 -  -3.3  -3.16564   CGTTCATGGGACGAA                CTTGC CCT GCAGG                CGCTCGGCGCGAAAC  45 1
JLK41_RS05155 NONE
JLK41_RS05150 NONE
JLK41_RS05145 1129948 .. 1129963 -  -4.6  -3.40899   AATCCTCCAGGACAA              GCTGCG TGCG CGCATC               GCCGAGGGCAAGATC  51 462
JLK41_RS05135 NONE
        cysZ 1126082 .. 1126095 -  -2.3  -3.13403   GCGGTTCGAGGAAGA               CATCC ATGC GGGTG                GGCGCACCGGGCATC  42 268
JLK41_RS05120 NONE
JLK41_RS05115 1122578 .. 1122599 -  -5.9  -3.37796   TGCCAGCATCGAGAA           CCTGCTCGAG CGC CT-GAGCAAG           GAGGAATTCGACCTG  55 438
JLK41_RS05090 1117700 .. 1117717 - -12.7  -5.10461   TCCAGGCAATAAAAA             GGGAGGC CATG GCCTCCC              TTCTCGCATGACCTG 100 45
JLK41_RS05085 NONE
JLK41_RS05080 NONE
JLK41_RS05075 1114407 .. 1114430 - -14.6  -3.86202   CTGCAGTAGATGAAA          GGGCCTGCAT GACA ACGCAGGCCC           GTCTCGTCAGTCGAT  93 32
JLK41_RS05065 1112640 .. 1112664 -  -4.9  -3.25823   GCTTCTGGATAGTAA          GAGGCAGTCAA ATG CTGCCTGCTTC          GTCCGTGCATGTCTT  48 64
JLK41_RS05060 NONE
        pilV NONE
JLK41_RS05050 NONE
JLK41_RS05045 NONE
JLK41_RS05040 NONE
JLK41_RS05035 1104523 .. 1104540 - -12.7  -4.72272   CGCTGCTAGGAAAAA             GACGGCC CTGA GGCCGTC              TTTTTCGTTACTCCG 100 121
        rpsT 1096602 .. 1096618 - -10.8   -5.4505   CGGGGCAATAAAAAA              CCGGCC ACAGG GGCCGG              TTTTTCAAGAACCTG 100 47
        dauA 1093823 .. 1093859 -  -5.8  -3.35798   AGCGGCCATCGACAA   GGTCGCCGGCCAGATCA ATGC CGAACTGGCCGA-GAGC    AACCCGGTGGTGTTC  53 493
         upp NONE
JLK41_RS04975 1091554 .. 1091574 - -18.3   -4.8622   CGCTGCAACGAAAAA            GCCCGCGAC CTG GTCGCGGGC            TTTTCTTTACGGCGG 100 43
JLK41_RS04960 NONE
JLK41_RS04955 1087083 .. 1087107 - -17.2  -3.33815   AGCCGCCGCAACGAA          GAAGCCCCGG CAGGT CCGGGGCTTC          TTTTTGCCTGGCTGT  93 40
JLK41_RS04940 NONE
JLK41_RS04935 NONE
JLK41_RS04930 NONE
JLK41_RS04925 1080662 .. 1080688 -  -5.8  -3.01712   GCCTTTCCCGGAACA        GCGCTGGCTGG CTGCAT CCTGCCA-CGC         CGCCGAGGAACTGGC  47 283
JLK41_RS04895 1073299 .. 1073309 -  -8.2  -3.61089   GCGCAACAACGAGAA                 GGCG CCG CGCC                 AGTACCATCTGTCGC  62 104
JLK41_RS04880 1068803 .. 1068824 -  -5.1  -3.09933   CTGCAATTGAGTGAA           GTGTTCGGGC GCA GCTCGAAC-C           AGGAACTGGTCAACG  49 196
JLK41_RS04770 NONE
JLK41_RS04765 NONE
JLK41_RS04760 NONE
JLK41_RS04755 1042860 .. 1042891 - -18.8  -3.57144   GCTGCGAGGTGGAAA      TGAAAACGGGCGCC CTGG GGCGCCCGTTTTCT       TTGCTTGCAGCTCGA 100 62
JLK41_RS04715 1036506 .. 1036532 -  -2.1  -4.41895   AAGCTCCAAGGAAAA         GCAGATGCAGG TTGAG CTTGCGCCCGC         GCACTGGTTTTTAGC  63 82
JLK41_RS04705 1034087 .. 1034107 -  -6.7  -2.81133   CACCGACCGATCATA            GGGCGCCAT GGC AGGGCGCCA            ACCTAACCAAGGGTG  50 94
JLK41_RS04700 1033022 .. 1033040 - -12.4  -4.98531   TGGCGAAACGAAAAA             GGCGACCC ACA AGGTCGCC             TTTTTCGTTCGTGCC 100 68
JLK41_RS04680 1028909 .. 1028925 - -15.1  -5.10461   CGCAGCCAATAAAAA              GCCCCGC GAT GCGGGGC              TTTTCGTATCTCGCT 100 47
JLK41_RS04655 1023327 .. 1023342 - -11.8   -4.7497   GGCAGGCATGAAAAA              GCCGGC TGAT GCCGGC               TTTTTCATGTCTTCA 100 38
JLK41_RS04595 NONE
JLK41_RS04590 NONE
        lptC NONE
        lptA NONE
        lptB 1011684 .. 1011700 -  -5.8  -3.40597   TTCTGTAGCGAAATA              GCCTGC GCCCT ACAGGC              GGAACTCGTGGCCCA  52 18
JLK41_RS04570 1009995 .. 1010016 -  -9.4  -3.01712   TTGCCTTGTGTAAGA           GACGGGTC TCGTGC GACCCGCC            ACCGGAACACGTTGG  60 72
        raiA NONE
        ptsN NONE
        rapZ NONE
JLK41_RS04550 1007606 .. 1007621 -  -4.6  -3.30441   CATCATGCTGCACAA              CGTGCC GGAA GGCATG               GCTGTCGGTGTGGCT  49 436
JLK41_RS04515 1001635 .. 1001664 -  -3.5  -3.43492   CTACATGCAGGACAA       GC-TCAACGCCC GCCTGAT GGGCGTCGCCGC       CACCGGTAACGGCCG  49 449
        gatC NONE
        gatA  989044 ..  989066 -  -4.9  -4.16943   TGGGAGAGGGGAAAA          GGCTGCATGGC TGC GCCATG--GCC          TAGAAGCCGCTCGGT  65 25
        gatB  987467 ..  987488 - -17.3    -4.128   ATCTCCAGATAGAAA           GACGCCGGG CAAG CCCGGCGTC            GTTTCGGTGGGTCGA 100 44
JLK41_RS04455 NONE
JLK41_RS04450 NONE
JLK41_RS04445  984940 ..  984968 -  -5.2  -3.04398   CCCGGGGGCGAAAAC       CGGCA-TGCGGGC CATC GCCCGCAGCATCG        TCAGCAACCCGATGA  47 512
JLK41_RS04425  981561 ..  981584 - -13.2   -4.4296   GAAGAGATAGCAAAA          CGCCGTTATC TTTC GACAACGGCG           CTGCTTTGTCGCGGG 100 48
JLK41_RS04420  979753 ..  979786 -  -3.8  -2.86785   GATGACATGAATAAC    TCCTTGAACGGCGCCC TTGC GGGCGCCG--CATGCA     TCACTTGTCGATGCT  42 26
JLK41_RS04415 NONE
JLK41_RS04410 NONE
JLK41_RS04405  975850 ..  975897 -  -2.7  -3.13403   CTTGGTGGATGAACA GCGCGTCATC-C-CCCT-TGCGTC GCT GACACACAGGGCGTGCTGCCTCGC CTGCTGGCGGGGGAG  43 120
JLK41_RS04400 NONE
JLK41_RS04395  973398 ..  973421 -  -3.7  -3.05384   CGCCTGCTCAGCGAA          GGCGTGCTG GCCGGG CGGGACGCC           TTGCTGCGTGCCGAG  44 449
         ada  971365 ..  971384 -  -3.4  -3.01924   GACCCTGGTCGAACA            GCTGGTCG GGCG CGGCAAGC             GCAACGAGGTGGCGG  42 107
JLK41_RS04375 NONE
        trmA  968026 ..  968047 -  -4.3  -2.52676   CAGCGCGGGAACTGA           GCCGTTCAG GCGA CTCAGCGGC            GCTCCAGCAGGACGC  42 18
JLK41_RS04360  965911 ..  965957 - -16.4  -3.23216   CCCGAGGATGACCAA GATGCGTGACGCGGCGCCGCAG TTG CTCCGGCGCCGCTGCACGGGTC ACTCCAGTTCCATCA  85 24
JLK41_RS04355 NONE
JLK41_RS04350 NONE
JLK41_RS04340  962226 ..  962246 -  -3.8  -3.57263   ATCCCCATGTCGAAA            GCCGGCGG AATGA CTGGCGGC            AAGTGCTTGACCTTG  51 311
JLK41_RS04330  961784 ..  961802 -  -5.3  -3.25719   TGACCACAGGATCAA            CCTTGACC CCAT GG-CAAGG             TCAAGCGTTCAGTTC  50 34
JLK41_RS04325 NONE
        cueR  958748 ..  958772 -  -4.1  -4.20749   GAAGAGGCGAAGAAA          CAGGCTCTGCG CAA CGCCGAGGATG          AACCCAAGGATACCG  65 208
JLK41_RS04305 NONE
JLK41_RS04300  955596 ..  955614 -  -5.9  -3.28712   GGCCCTGGCCGACAA             CAGCCGC GAGCT GCGCCTG             GCGGACGAGGCGGAT  53 283
JLK41_RS04265 NONE
JLK41_RS04260  943658 ..  943681 -    -3   -3.9279   ATCGAACTGGACAAA          CTGGGCCAGCG TCT CGCGCGCC-AG          GGACGTTCGCTGCAC  58 302
JLK41_RS04210 NONE
JLK41_RS04205  930178 ..  930231 -  -6.8  -3.53444   GTAGGGCGGGTGAAA CCCGGCTGTT-CTGTAGT--GGCGGGT TGC ACCCGCCCTACTCAAGGATCAGCCGAG CGTGCGTCATGCGCG  58 32
        cobB  929232 ..  929286 - -34.6  -3.21747   CCAGCGCAGCAGTAA CGTAGGGCGGGTGCAACCCGCC GGTTTCGGCGT GGCGGGTTGCACCCGCCCTACG TCGCTGTCTGGTAAT 100 115
         cra  920229 ..  920245 -  -2.2  -2.87344   CAGCGGGGTCAGATA             CGC-GCC TTGA AGCTGCG              TTCGATGGCCTCGAT  40 2
JLK41_RS04170  919026 ..  919051 -  -5.3  -3.18681   CGTCAAGGCGATGAA         TGCCAGCCACC AGAT GGCCGATGGCA          CGGTCAGCGAGTCGG  49 337
JLK41_RS04145  911554 ..  911565 -  -5.8  -4.36914   TGGCGGCCTATAAAA                CCTC GGTT GAGG                 AGCGGCTGAGCAAGG  71 324
        pilB NONE
JLK41_RS04115 NONE
JLK41_RS04110  904411 ..  904421 -  -2.4  -2.57564   CCAGGGTTTCATAAC                 GCCG ATG CGGT                 CCCGTGATTGCTTAA  38 191
JLK41_RS04105 NONE
        yacG  903460 ..  903475 -  -4.6  -3.84406   GGTGCAGCAGAACAA              GGCGTC GCGC GACGCG               CAGGAGCTGGCGCAC  58 158
JLK41_RS04085 NONE
JLK41_RS04080 NONE
JLK41_RS04075  901004 ..  901018 -  -2.8  -3.32294   GGAAAGTGCTCACAA               GGCTTT GAA AAAGAC               GGTGTGAGTGCGAGA  44 59
JLK41_RS04070  899668 ..  899682 - -12.8  -3.41229   AGAGGGTCATCAGAA               GGCCGC TCC GCGGCC               GCTTTCAGTGCAGTT  76 30
JLK41_RS04050 NONE
JLK41_RS04045  896292 ..  896309 - -12.7  -4.72272   CCGGTGGATGAAAAA             CGGAGCC TGCG GGCTCCG              TTTTTCGTTGTGGCG 100 79
JLK41_RS04035  890027 ..  890037 -  -2.4  -3.21747   TCAGCTGAGCATGAA                 CAGC TCG GCAG                 CGTTGAACCGGGCGC  43 0
JLK41_RS04030  888596 ..  888619 - -18.2  -4.66609   GATCCCAGGCAAAAA          GAAGCCCGCC GATC GGCGGGCTTC           TTCATTTCAGGCTGA 100 44
JLK41_RS04020  887347 ..  887370 -  -6.7  -3.21416   TACGCGCAGCATGAA          GGTGTATCC AACGAA GGAGACACC           CTCATGTTCCTGTTC  54 181
JLK41_RS04005  885158 ..  885184 -   -13  -3.05463   ATCTGCCGGATCGAA         GACGGCATCGAG TTG CTCGACGACGTC         TCCCTGCAGGCGCTC  70 152
JLK41_RS03990  883245 ..  883268 -  -2.5  -3.48924   CGAGTTCGCACACAA         GCTCACCTACC TGCC GGT-GGTGA-C          ACGCGAGCCGGCGGC  48 252
JLK41_RS03980  881075 ..  881085 -  -4.6  -3.01924   CAGCGCCGCCGAATA                 CGGC CTG ACCG                 CCAACGGCGCGTGCA  45 465
JLK41_RS03930  867298 ..  867327 -  -8.5  -3.15621   AACGGTAATCCAATA       CGGGTGGCCACAA GTCA TCGTGGTCACGCG        ATGTAAGCAACTCCG  57 153
JLK41_RS03920  864378 ..  864431 -   -11  -2.92389   CAACCTACTGAGAGA TCACATCTAGCCCGGCGCGT-TCCTG ATTG CAGGCTACGCGCCGGG-TCGTTGTGG CTAGGCCCCGAGCAG  66 26
JLK41_RS03915  862867 ..  862912 -  -4.6  -3.28712   CGCGGTGCTGGACAA GGCCTCGCGC-CACGCCGC CCCGGACCT GCTGCGCATGCACGAGTCC CTGGCGCGGCGGCAG  49 466
JLK41_RS03905 NONE
JLK41_RS03900 NONE
JLK41_RS03895 NONE
JLK41_RS03890  859312 ..  859328 -  -2.1  -3.13403   TGCGTTCGATCAATA              GGGAGGG TAG CCGTCCA              GCGCGGCCCGGATGG  43 3
JLK41_RS03885 NONE
JLK41_RS03880 NONE
JLK41_RS03875 NONE
JLK41_RS03870  857006 ..  857021 -  -5.4  -3.21593   CATTCCGCCAGAACA              GGTGAT CGGC ACCACC               TTCGCTACGCAGTTT  51 403
JLK41_RS03860  855302 ..  855315 -  -2.3  -3.72893   GAGTCCTTGAGCAAA               GAGGG CATT CCATC                GCGCAGGGGTCGCCT  52 42
JLK41_RS03850  853652 ..  853671 - -13.6  -3.10343   ATACCTACTAGGCAA            GGCCAACC GCAT GGTTGGCC             TTTTTTTTGGTTCAT  76 37
JLK41_RS03845  852821 ..  852844 -  -8.2  -4.05714   ACGCCTAACTATAAA          TTAGGCGACA TTGC TGTCGCATAA           CATCCCCAGTAATGT  71 441
JLK41_RS03840  852317 ..  852328 -  -2.2  -3.07816   GTCCCAGTGAGCGAA                CGGT TTTA ACCA                 TATTTTAGGCGTTGA  41 30
JLK41_RS03835  851449 ..  851472 - -10.2   -3.3482   TAACGTCTGAATTAA          GCCG-CCCCGC GAA GCGGCGTCGGC          TTGAATGAGTTGTTA  68 480
JLK41_RS03830  850416 ..  850430 -  -8.6  -3.29142   GCCAGGAAGAACAGA               CGATCA TGG TGATCG               GAGAGCAGAACAGGC  59 284
JLK41_RS03815  849450 ..  849502 - -12.9  -4.39166   GGGGACAGAGGAAAA GGGACAGATTTATTTATGGTGCAGC TCC ACTGATCTAAAAATAAATCTGTCCC CTTTTTTCCCAAGGA 100 165
JLK41_RS03770  836096 ..  836112 -  -7.2  -3.02144   TCAGGGGGCTCAAGA              GCAGCC TGCAG GGCCGC              TTCAACCTGGAAGTG  51 324
JLK41_RS03760  833924 ..  833936 -  -5.5  -3.29947   GACCGAGGAGATCAA                CCGCA ACG TGCAG                GGCATCGCCGACCTG  51 135
JLK41_RS03735 NONE
JLK41_RS03730 NONE
JLK41_RS03725  820772 ..  820791 - -10.6  -3.14132   TCTGCTCGCCACCAA            GGCCGCGC TGGA GCGTGGCC             CGCTGGGCAAGGAAC  64 373
JLK41_RS03705  818152 ..  818168 -  -3.6  -2.53263   CTGATGCTCAACTGA              TCGCCT CGGCC AGGCGT              CGAGCCAGGTGCAAC  40 1
JLK41_RS03680 NONE
JLK41_RS03675  809676 ..  809687 -  -3.6  -3.64599   GCATGATACCGGAAA                GCGC CCAT GCAC                 ATTTCGCCAGCTGAA  51 124
JLK41_RS03670  807755 ..  807776 -  -6.5   -2.6472   CAATAGTCGACACGA           TGCCTGCCG TTTG CGGCAAGAA            TATGACTATAGCAGC  49 106
        aroQ NONE
JLK41_RS03660 NONE
        accC  805300 ..  805331 - -16.6  -3.53012   GCGTGCCCGCCGAAA      CGACAAGGGCCGCC CGTG GGCAGCCCTTGTTG       CAACGCGTATCAGGC 100 41
        prmA NONE
JLK41_RS03645  802860 ..  802878 -  -3.1  -4.05033   CGCAGTTGAGACAAA            GGGC-GAT CAAC ACCTGCCC             TCCACTGTGTCCTCA  59 199
        dusB NONE
         fis  801469 ..  801488 - -10.6  -5.20216   GATATCAGCAAAAAA            GGCGGCTC ATGC GGGCCGCC             CTTTTCAGGAGTTCA 100 44
        purH  799718 ..  799734 - -10.9  -3.88291   CAGTACGTTCATAAA              TCTCTCC TGC GGAGAGA              GCGACAAGCTACAAG  82 115
        purD  798275 ..  798286 -  -5.8  -3.01712   CCGTTTGGGGGAATA                CGCT ACAG AGCG                 GCTTTTTGTGACCCG  49 164
JLK41_RS03620  795390 ..  795408 -    -3  -2.62184   GCTCGTTTGAGAGTA             GGGCGG GGGCAAG CCGCCA             TCGATGGTCAGGCGG  38 53
JLK41_RS03615 NONE
        atzF NONE
JLK41_RS03605 NONE
        urtA  790543 ..  790562 -  -6.4  -3.05816   GTAGCCCGGATGCAA            TCCGGG GTGAGCGT CCCGGA             TTGCATCCGGGCTAC  52 184
        urtB NONE
        urtC  787685 ..  787698 -  -2.4  -2.79098   CGCAGCGACGAAGCA               GTAC GAGTGG GTAC                GCTGAGGAGCGGGCA  39 76
        urtD NONE
        urtE  785930 ..  785975 -  -2.3  -2.69151   CTGTCGCACAGATGA TGCCGC-GGTGTCAGGCGTCGC TGC GCACCGCCCGCGACCTGCCTCA GATCGCCACCAAGCC  39 23
JLK41_RS03575  784932 ..  784955 -  -4.4  -2.60075   GTGCCCTGAACCAAT          TCGGTGCGCCG TTG CGG-GCGCCGG          CCTGAAGCGGTCGGC  43 51
JLK41_RS03570 NONE
        ureA NONE
JLK41_RS03560 NONE
JLK41_RS03555 NONE
        ureC  780898 ..  780917 -   -10  -3.05384   GCGCCGGTGAGTGAA            GCGGCGGGT TGC ACCCGCC-C            TACTGGCGTTCGTCA  64 89
JLK41_RS03505  773872 ..  773891 -  -8.5  -3.15861   GAGCATGCTCAGCAA            GGCCGGC GCACGG GCCAGCC             TGCTCCCGGGCTTAC  57 37
JLK41_RS03500  773386 ..  773421 -  -6.8  -3.05384   GCCCTGTGCACTCAA    CTGGCA-AGCGGGCAGA GCG CCCGGCCGCTGTGGCAG    CGCTCATGGCCAGGC  52 29
JLK41_RS03495  772198 ..  772214 -  -9.3  -2.53382   ACGACCCGGAAGGCA              GCCGCCG CGA CGGCGGG              CCTGAAAAACGGCCG  56 81
JLK41_RS03490 NONE
JLK41_RS03485 NONE
JLK41_RS03480  769352 ..  769385 - -11.7  -2.62396   TACTCTGCGAGAGCA     TGCAGCGCAGTG-GCG CCT CGCCCGCTGCGCTGGA     GCTGGAGGTCACCGA  61 455
JLK41_RS03460  765427 ..  765444 - -14.1  -5.03314   CGCAGGCGTAAAAAA             GCCCGGC GTGC GCCGGGC              TTGGGGGTGTTGCCA 100 47
JLK41_RS03445  762329 ..  762344 -    -4  -3.34517   ATGTGCCCGGAAATA              GTGCAAG TGG CTTGC-C              AAGGCCGCAGAGTGC  47 139
        ureE NONE
JLK41_RS03435 NONE
        ureG NONE
JLK41_RS03425 NONE
JLK41_RS03420 NONE
JLK41_RS03415  758306 ..  758325 -  -2.8  -3.47322   GGGCAGGAGAACGAA            GGCCAGCTC AGC AAGC-AGCC            GGCATGCCAACCCGG  47 214
JLK41_RS03410  757543 ..  757554 -  -2.2  -3.14564   GTAGCTGGCGAGGAA                CTGC TTGA ACAG                 GTCGTTGAGGGACAT  43 133
JLK41_RS03405  756801 ..  756818 -  -5.5  -3.52652   TCCATGTAAGGACAA             GGCGCCA AGGT TAGCACC              GCACCCGCCTGCCTG  55 52
JLK41_RS03400  755836 ..  755846 -  -5.4  -4.07568   CGGCTGGCTGGAAAA                 TGAG CGG CTCA                 GGCGGCCGTCGAGGG  65 23
         azu  754873 ..  754890 -  -9.1  -2.66316   CGCTGGAGCACATCA             CCCTGGCC TGG GGCC-GGG             ACTTCTCCGATGTGT  54 130
JLK41_RS03375 NONE
JLK41_RS03370 NONE
JLK41_RS03365  743774 ..  743785 -  -7.2  -2.64099   CCGTGGCATCAGAAG                CCGC TTTC GCGG                 ACGCCCAGTGCGGCC  49 7
JLK41_RS03360 NONE
JLK41_RS03355 NONE
JLK41_RS03350  742015 ..  742041 - -11.5  -3.05384   CGTTGCTTTACGTAA        GTGGCGGCCCGC CTGG GCGGGCCGAC-C         TTCAGGTGCTTGCTC  68 44
JLK41_RS03345 NONE
JLK41_RS03340  734249 ..  734267 - -12.4  -4.41494   CACGCTGAATGAAAA             CGCCAGCC TCG AGCTGGCG             TTTTTCTGTCCGCCC 100 90
JLK41_RS03330  729775 ..  729797 -  -4.8  -3.14564   CGAGCTGCTGACCAA          GGTCACGGC TCGCGT GCCGCG-CC           GCTACATCGGCTGAT  48 40
JLK41_RS03285  721283 ..  721297 -  -2.8  -3.57144   TCCGTTATTGTGAAA               CAGGTT ATC AATCTG               CTTCACGAATTTGGT  49 37
JLK41_RS03280  721111 ..  721128 - -11.3  -5.60993   GCGGGCATAAAAAAA             CCGAGTC TTTT GACTCGG              TTTTCTTGAATTTTG 100 39
        queG  704711 ..  704728 -  -5.5  -4.38154   ACAGCTTCCAGAAAA             GCGCCACG CAT CA-GGCGC             TGGACGACATTCGCG  72 159
        rsgA  702227 ..  702244 -  -7.7  -3.01712   GCGCGCCTGGCAACA             CCGGCGAG GCG CT-GCCGG             CCGACCAGCTGCGTG  53 93
JLK41_RS03180 NONE
JLK41_RS03175  697868 ..  697880 -  -3.3  -3.21064   CTGAGAATGAAGAGA                CGTTG TTT CATCG                TGTTTCCTTGAGGGT  45 93
         psd  696856 ..  696869 -  -3.1  -3.07816   TGTCTATCCATCGAA               CTCGGA TAC TCCG-G               CCACACGATGACAAG  43 174
JLK41_RS03165  695000 ..  695018 -  -9.5  -3.07501   ATAGAAGGGTCAATA             CCGCGCC GAACG GGCGCGA             AAAGGCGACAAATGG  60 56
JLK41_RS03160  692661 ..  692679 - -14.6  -2.79183   TGCAGCTGGAGCAGA             CCATCGCC GTC GGCGATGG             CGCCAACGACCTGCC  72 263
JLK41_RS03150  689573 ..  689608 -  -8.2  -2.66316   TGGTCTATGACATGA    GCCTGGAGCTGCCGCGC GAC GCCCGGCAGCTG-AGCC    TGTTCCATGTCGATG  52 326
JLK41_RS03125 NONE
        waaA  683842 ..  683852 -  -8.2   -3.6715   CCATCGAAGGGCAAA                 CGGC TTA GCCG                 CCGTCCCGGTAGTGG  64 327
        thiC NONE
JLK41_RS03100  677234 ..  677250 -    -5  -3.14132   CGCTGGTTTCACCAA              GGGCCC GCTGT GGGCCA              GTCCCGCCAAAGTCG  47 286
JLK41_RS03080 NONE
JLK41_RS03075  673613 ..  673625 - -10.5  -2.70932   TGTTGCGTTCAAGGA                GGCCC GGC GGGCC                CCCGAGTCATGTCAG  61 37
JLK41_RS03070 NONE
JLK41_RS03065 NONE
JLK41_RS03060  669924 ..  669951 - -24.2  -3.92996   CGCCACAGACAACAA        GGCCAGCGGGGC GTTA GCCCCGCTGGCC         TGTGGGTGATCGGGG 100 230
JLK41_RS03045  666483 ..  666493 -  -8.2  -3.23899   TCTGAATGAACGCAA                 GCCG GGC CGGC                 AGAAGTCGTTTGAGG  58 226
JLK41_RS03015  657644 ..  657667 -  -4.6  -3.02144   TGATGGCTGGTAACA          TCGAAAAAGC CTAC GCCTTTTCCA           CGCCCGGTTACCGCG  45 279
JLK41_RS02935 NONE
JLK41_RS02930 NONE
        cpdA  639470 ..  639490 -  -2.3  -5.06816   AGGCTGCAAGAAAAA            GCCGGGCGG TGG CCGTTGGGC            TGCACATCTCGCTTG  78 49
JLK41_RS02920 NONE
        parE  636888 ..  636901 -  -3.1  -3.14931   GTGATGGCGCATCAA               GCC-AG AAC CTCGGC               CAGGTTGCCCTTGGT  45 8
JLK41_RS02910 NONE
JLK41_RS02905 NONE
        parC  633050 ..  633091 -  -5.8  -3.56092   GTATCATCCGTCAAA CCGCGCTA-CGAC-TCCAGC CTTG GCCGCTTGCCGGTAGCGCGG ATATCACGAATGGAC  55 57
JLK41_RS02895  632208 ..  632223 - -11.8  -5.15634   GACTCCATGAAAAAA              GCCCGC ATCT GCGGGC               TTTTTGCTTAGAAAC 100 33
JLK41_RS02860 NONE
JLK41_RS02855 NONE
        aceE NONE
        aceF  599665 ..  599684 - -11.4  -5.94713   AGGTGACAAAAAAAA            CCCCGCCT GAAC AGACGGGG             TTGAGGATGCGAGCG 100 59
JLK41_RS02760  596174 ..  596186 -  -6.2  -2.78463   ACGCCGCGTATTACA                GCCG CTGGT CGGC                CTGTGGGCGGCAGGG  46 8
        msrA NONE
JLK41_RS02750  595173 ..  595193 -  -2.4  -2.70354   CTCGGGAGAAATGTA            GGCAGGGC TGGCG GACATGCC            GTGTACGCAGAAAGA  39 84
JLK41_RS02745  593555 ..  593574 - -13.6  -2.71364   CGAGGCGCTCAACGA            GGCGCATG GGCG CATGCGCC             AGGCCATCGTGGCGA  67 388
JLK41_RS02730 NONE
JLK41_RS02725  589730 ..  589747 -  -4.1  -2.92475   GCCACGGTGATAAAG             CGCCA CACCACCC TGGCG              ATCCCGGCACCGCAG  42 49
JLK41_RS02720  587767 ..  587823 -  -9.4  -3.45321   AGCCACAAGCCACAA GCCACAAGCCACAAGCCTGAGCGG-AG TGCA CTGCCGCTTTCACTTGTCGCTTGAGGC TTGCAACCTGTGGCT  66 46
JLK41_RS02715  585819 ..  585842 -  -3.7  -4.25104   CGGTGGCGACGAAAA          GTGCTGGCG ACGTGA CGCAGGCAC           GGGCCTGAGGCCCGT  62 80
        mscK NONE
JLK41_RS02705 NONE
JLK41_RS02700 NONE
        trxC  578433 ..  578446 -  -3.7  -3.59979   TCGCCCCAGCCTAAA               GGCTG GACC CTGCC                CTGCAATTGACCTCA  51 67
JLK41_RS02690 NONE
JLK41_RS02685  577007 ..  577022 - -11.8  -3.81755   ATCCGGCAAAGAGAA              GGCGCC CTCG GGCGCC               TTTTGTTCATCAGCG  80 35
JLK41_RS02675  575619 ..  575635 - -15.1  -4.78107   TAGCACCATGAAAAA              GCCCGGC ATT GCCGGGC              TTTTTCTTAGAAACC 100 32
JLK41_RS02645  568299 ..  568315 -  -2.2  -3.75598   CAAGGAAGTGAAGAA              CGCC AAGGAAGAG GGCG              TGAAGTTCCTCTTCA  51 405
JLK41_RS02590  551605 ..  551632 - -17.2  -3.51924   CCTGGATGCAGACAA        CAAAAAACCCGC CTAG GCGGGTTTTTTG         TTGTCTGTCGTATGC 100 64
JLK41_RS02565  545372 ..  545388 -  -2.2  -5.11033   TAGAAGCTCAAAAAA              GGTCGA TCGGG TCGACA              TCCAGCGACCAGCGC  78 1
        argS NONE
JLK41_RS02555 NONE
        hslV NONE
        hslU  540751 ..  540779 -  -2.5  -2.53911   GCAAGCCTCAAGCTA       CAAGTC-TAAGC GGCTTT GCTTCTGACTTG        TAGCTTGCTGCTTGC  37 49
JLK41_RS02540  540181 ..  540195 -  -5.6  -3.70902   CCTGGCACAGCCAAA               TGCAGG GAA CCTGCC               AGTTCCTTGGTTACC  60 178
        phaC  538217 ..  538237 -  -6.7   -2.6155   GTGCGGAATACGAAT            GGTTGCGGC ATA GGCGCAGCC            CCTATGGAGTTGAGC  49 160
        phaZ  537294 ..  537319 -  -4.5  -2.89564   GGTGCATTCCAGACA         GCCGCGTCGAA TTTG CCCGGGGCGGC          TTGCGCCCCTTCGTC  45 76
        phaC  535392 ..  535410 - -11.6  -3.42078   GAGAGGTGACGATAA             CCGGCTGG CGT CCTGCCGG             CCATCGCTTGTCAGT  74 86
JLK41_RS02520  534679 ..  534699 - -15.4  -3.71848   TCTCGGGATCAAGAA            CGCCCGGC CCAGT GCCGGGCG            TTTGCGTTGTGCGCC  95 61
        ubiE NONE
JLK41_RS02495 NONE
        ubiB NONE
        hisI NONE
JLK41_RS02480 NONE
        tatA NONE
        tatB NONE
        tatC NONE
JLK41_RS02460  526683 ..  526697 -  -5.6   -2.8805   ACGAGTCGGTAGAGA               CGGCCA GCC TGGCGG               CGTGGAGTCTGGTGC  46 208
JLK41_RS02450  525151 ..  525193 -  -8.5  -2.62983   GTGAGCTGCAGATCA TCCGTGATGCCGGCCACTCGG CAG CCGAGCCG--GGCATCACCGA TGCGCTGGTGCGTGC  52 489
JLK41_RS02435  523312 ..  523335 -  -8.8  -3.16881   TATCGACGTGACCAA          TCGCTGTCGC GATG ACGACGGCGA           GTGGATTGAAGCCAG  56 355
JLK41_RS02395  513461 ..  513475 -    -7  -3.18849   GGCAGACCACCAAGA               GCTGGC GAC GCCGGC               CTGCGTCGGGCGGGT  52 67
JLK41_RS02370  508708 ..  508725 - -11.3  -2.58544   CGCCACGGCGAGAAC             CTGCACC CCCT GGTGCAG              TCCGCGCTGGCCGAA  59 67
JLK41_RS02345 NONE
JLK41_RS02340 NONE
        dgcA NONE
        dgcB NONE
JLK41_RS02325 NONE
JLK41_RS02320 NONE
JLK41_RS02315  494724 ..  494742 - -17.4  -5.27335   CGCGGCAAAGAAAAA             GGGGCGCC AGT GGCGCCCC             TTTTTTTGCCCCTCC 100 83
JLK41_RS02305 NONE
JLK41_RS02300 NONE
JLK41_RS02295 NONE
JLK41_RS02290 NONE
JLK41_RS02285  486779 ..  486809 - -16.8  -3.87994   AGCGAGCGTCAGAAA       CGACGAAGCGGGCC AGG GGCCCGCTGCGTCT       GCTCGATGAAACCGA 100 44
        betI  485994 ..  486005 -    -3  -3.65902   CCTATTTTATTTAAA                TTGA ACGA TCAA                 TCAATAAAAACGACA  49 119
        betB NONE
        betA  482530 ..  482540 -  -6.8  -3.31144   CCTGCACGGCGAGAA                 GCTG CCG CAGC                 TGATCAGTCCGCAGA  54 127
        mdtD  480028 ..  480047 -  -2.7  -3.34398   GGGGCTGGTGAAACA            GGGCCGC AGTGTA GCAGGCC             GGGTCCGGCGCTTCT  44 61
        dbpA NONE
JLK41_RS02250  477040 ..  477068 -  -5.2  -3.29461   CAAGGCGTTCGACAA        CGACCCGGACCT GCACA AGGTCGGCGTCA        GCAGCTTCGAGATCG  51 304
JLK41_RS02240 NONE
JLK41_RS02235  473263 ..  473291 - -13.1  -3.16564   GCTCGATGCGATGAA        GGCCGATGGCAGC TTC GCCGCCATCTACC        ACAAATGGCTGCCCG  72 68
        yccS  466719 ..  466733 -  -2.7  -3.14602   GGCATGCCACGAATA               GTGGC AGAAA GCCTC               CCGTGACAGCTAGTG  43 35
JLK41_RS02200  464625 ..  464670 - -12.5  -3.72324   CACGCTGATGAACAA CAGCTCACGCAGGGCCGGC TTCGGTGT GCTGAGCCCGCGCGAGCTG GAAGTGGTGCGCCTG  77 240
JLK41_RS02165 NONE
JLK41_RS02160 NONE
JLK41_RS02155  456126 ..  456172 -  -3.6  -3.68222   GCTCAAGGCCAAGAA GGAAATCC-GCGTGGCCTCGC TGTTTC GCGATGCCGCACCAGTCTTCC TGCAGATGATCGTGG  54 189
JLK41_RS02125 NONE
JLK41_RS02120 NONE
JLK41_RS02115  449503 ..  449533 - -19.8  -3.59979   GGCTCTGATCCCAAA       CACCCCGCAAAGGC GAA GCTTTTGCGGGGTG       TTTCATTTCGAGGGG 100 93
JLK41_RS02075  440944 ..  440973 - -15.3  -3.32022   TTTTTCATACAGCAA       CAGCAATATCAAA ATAT TTTGATATTGCTG        TCCGGTTGCTCCGTG  86 4
JLK41_RS02070 NONE
        metK  438671 ..  438697 - -15.9  -4.90266   GTCAGGAACGAAAAA        GCCCCGCACAGC CGAG GCTG-GCGGGGC         TTTTCTTCAGGCGCT 100 43
JLK41_RS02060  437929 ..  437960 - -14.5  -2.66435   ATCTGGAGCAGACCA      CGGCGGCGCTGGTC CAGGC GACCAGCGC-ACCG      CCGTTGCGCCGTTCC  71 106
JLK41_RS02040 NONE
        metF NONE
JLK41_RS02030  431149 ..  431168 -  -2.1  -2.90392   CATGGCTTAAGCATA            GTCCCCCT TCGGC AAGGGG-C            TGGGGCGCAGCAAGG  40 61
JLK41_RS02025  430283 ..  430293 -  -4.6  -3.28712   GCTGGCTTCCGAGAA                 CCAG CAT CCGG                 GCGCAAGCCTGGCGG  49 98
JLK41_RS02020  428231 ..  428262 - -18.8  -3.53012   GCCTTTTCCCCTAAA      CGAAAACGCCGCCC TCAG GGGCGGCGTTTTTG       TTGCTGCGTCGGCGC 100 41
JLK41_RS02005  425249 ..  425264 -    -6  -2.94412   GGCAAGTGTAAAGCA              CTGCGC CTCT GCGCTG               TTACTTGCCTCTGGC  48 49
JLK41_RS02000  424422 ..  424440 -  -2.4  -4.00782   GCAGAGCATGACAAA             GACTGC TCGGCTT GCAATC             TCTTGAGGTCACATT  57 62
JLK41_RS01995  422732 ..  422752 - -15.4   -4.8622   GGCCCCAACGAAAAA            GCCCCGGC ACATG GCCGGGGC            TTTTTCATGCCGTCA 100 51
        gshB NONE
JLK41_RS01945  407187 ..  407208 -  -3.5  -2.66711   GCGACAAGCTACAAG           CGCGGCCGC TCAG GCGGGTGCA            TCGTCCAGGCGAGGG  40 42
JLK41_RS01940 NONE
        ruvX NONE
        pyrR NONE
JLK41_RS01925 NONE
JLK41_RS01920  403043 ..  403062 -  -7.8   -3.6279   AAAGCTCCTGAACAA            GGCC-AGCG CGA CGCCAGGCC            GGCGCCTTGGGCGCG  64 243
JLK41_RS01915  400632 ..  400665 -  -5.9  -3.02511   CGCAGCTGGCCAATA     TCGGC-AGCTCGCTGA AGT TCTGCCTGCTGGCCGA     AGGCAACGCCGATTG  49 474
        yrfG  398600 ..  398610 -  -3.2   -4.1822   TTCGAGGCCAACAAA                 CCGA TGC TCAG                 CCATCCGGACAAGAT  63 137
JLK41_RS01890 NONE
        fdhD NONE
JLK41_RS01880  393903 ..  393916 -  -5.9  -3.97368   CCTCGAATGCAGAAA               CCGCC AGAT GGCAG                GGGTTACGCCATTGA  62 75
JLK41_RS01875  393092 ..  393103 -  -5.8   -3.1247   AGCCCCGACAGTGAA                CTGC TGCA GCAG                 GAGCGGGACGAGCGC  49 361
JLK41_RS01840  385727 ..  385757 -  -5.3  -3.04144   GGGTGAGCGGCAATA      GCGCGGTGTGCTGA TCAA CCGGC-CACCGCGA       TGATCTCCTCGATCA  49 9
JLK41_RS01815 NONE
JLK41_RS01810 NONE
JLK41_RS01805 NONE
JLK41_RS01800  377856 ..  377894 -  -3.7  -3.08812   GGTTGGGCAAGAAAT  TCTCCGCACGCTTCCAGA GTGG CCCGGCA-CGGGCGGCGA   CATATGCCGTCAGCC  43 51
JLK41_RS01780  373054 ..  373074 -   -14  -2.80699   GTTCAACGAACAGCA            GGGTGGCG GCTTG CGCCACCC            CTGGGCGGACGAGGA  73 57
JLK41_RS01770 NONE
        rimK  371174 ..  371190 -  -2.2  -2.52464   CGGCCGTCGAACGCA             GGGCTCA TCCG CG-GCCC              TTGGTGCGGGTCTGG  37 13
JLK41_RS01760  369905 ..  369915 -  -4.6  -2.79671   ACTGGAACTGGAAAT                 CACC GAA GGCG                 TGCTGCTCGAGGACG  43 395
JLK41_RS01740 NONE
JLK41_RS01735  361318 ..  361329 -  -7.2   -2.5294   CAGTCGCCACAATAT                GGGG ATCG CCCC                 CGCACTCTGCAAGGG  48 82
JLK41_RS01730 NONE
JLK41_RS01725  359316 ..  359336 -  -8.3  -3.29461   CAAGGTGTTCGAGAA            GGCGTTG TAACCCG CAACGCC            GCGACCGCTGGGAAC  59 72
JLK41_RS01700  353161 ..  353192 - -17.4  -3.64822   AGCCTGGTACTGAAA      TGAAAAACGGGCCC TTCG GGGCCCGTTTTTCG       TGGGGAGCGGCAGCG 100 96
JLK41_RS01655  341551 ..  341568 -  -9.8  -4.44608   TGCAGGCAAAAAGAA             GCCGGC TCTACG GCCGGC              TTTCCGGGGTGTTAC  89 37
JLK41_RS01650  340341 ..  340368 -  -4.8  -3.07816   GCGCCAGCGAGGCAA        GCGTCTTCAGGGA CCA TCGCGGAAG-CGC        TGCCAGATCTGGTCG  46 4
JLK41_RS01645  339604 ..  339627 - -12.4  -4.06419   GGCGTGCAGAAACAA          GCCGCCGCCT GGGC AGGCAGCAGC           GGCAAGGCTTCGGGT  89 40
        aguB NONE
        aguA  337268 ..  337287 -   -15  -4.19238   GCGGGAACGCGAAAA            CGCCCGAC ATGT GTCGGGCG             TTGACAGGTAGGGCA 100 90
JLK41_RS01565 NONE
JLK41_RS01560  325569 ..  325579 -  -2.4  -3.14132   TGTTCGGCTCAGGAA                 GCCG AGT CGTC                 GGTCAGGGCGCGGTC  43 8
        ssrS NONE
JLK41_RS01550  324444 ..  324462 -  -7.4  -2.89447   TGCGAACTACAATGA             TGCGCG ACCAACG CGCGCA             GTTGCCTTGAAGGGG  51 234
JLK41_RS01545  323806 ..  323824 -  -7.4  -3.62591   TGGATAACTCCCAAA             GCTCTCAC TGG GTGATAGC             ACAGTGCCGGTTCTG  60 43
JLK41_RS01540  321961 ..  321971 -  -8.2  -2.53995   ATGCAGGTCAAGCGA                 GGGC GGC GCCC                 CACAGGCAGGTGCGA  52 7
JLK41_RS01535 NONE
        rbbA  318098 ..  318117 -  -3.5  -2.78463   AGGCGTTCCATCAGA            CCTCCTG TTTGCG CAGCAGG             CTGGCGCTGAGCAGG  41 1
JLK41_RS01525  316575 ..  316626 - -12.9  -2.81464   CGACGATCTACCACA GCCTGACGCCTGCCCTGATCGGC AACCTG GCCGACCAGGGCAACCGCCTGAA GTTCTTCAAGGCGGA  69 368
JLK41_RS01515  315294 ..  315306 -  -5.5  -3.52204   GCACCCTTAAATGAA                CAGCA CTG CGCTG                GGGCCGGCTTTTTCA  55 58
JLK41_RS01485 NONE
JLK41_RS01480 NONE
JLK41_RS01475 NONE
JLK41_RS01470 NONE
JLK41_RS01465  306183 ..  306229 - -16.7  -3.05384   GCCCCGGTCACGCAA TCACAGGCGTCTTACGCCCCGGA GTA TCCAGGGCGCA-G-CGCCTGTGC CCGCGCAGGTGGCGC  87 61
JLK41_RS01460 NONE
         ppx  303957 ..  303982 -  -6.8  -3.06133   CAACCCGCCACGCAA         CGCTGGCAGGG GGCCG CCCTGTC-GCG         TCTCAGGTCGGGGAG  52 43
JLK41_RS01435  298683 ..  298699 - -11.5  -3.51329   CACCGGCAACCAGAA              CCCGCGC AAT GCGCAGG              CCGGCCTGCTGGAAA  72 157
JLK41_RS01420  294614 ..  294637 -  -7.4  -3.28712   TCTGTGGCTGGAGAA          TCG-CCCTGGC GCC GCCAGGCTCGA          GTACCTGCGCCTGCT  56 165
        elbB  292632 ..  292678 -   -15  -3.12895   CGCTCCATGAAGACA TGCCGCCACGCTGCCGCAGCCC GAT GGACTTGAACAGCGCGGCGGCC AGACTGCCCTGGCCT  82 78
JLK41_RS01405  291906 ..  291928 -  -3.2  -3.61398   CCGCCTGGTGAAGAA           GGGCGTCGCG GCA CTCGACCCGC           GTGGCCGAGAGTTCG  49 242
JLK41_RS01370  285188 ..  285203 - -10.4  -3.53343   AAGCCCGCCGCCAAA              CCGGCT GCCA AGCCGG               TCGCAGCCAAGGCCC  67 306
JLK41_RS01360  283263 ..  283277 -  -9.2  -3.14132   CGCTGCCCTGACCAA               GGCACC GCA GGCGCC               GGCCATCAATGGTGA  59 420
        argH  274556 ..  274575 -    -5  -4.07568   TTTTCCCTGGGAAAA            TGTCTAGCG GTT CGCCAG-CA            GTTCCCGGCCACGTA  61 9
JLK41_RS01305  274295 ..  274311 - -10.9  -2.71364   GCACGGGGTCAACCA              TGGCTGA GTG TCAGCCA              GGCAAGCGCTGCGCC  65 2
JLK41_RS01300 NONE
JLK41_RS01295 NONE
JLK41_RS01290 NONE
JLK41_RS01285  272031 ..  272042 -  -4.4  -3.54459   GGAATGGCTGTGAAA                GTAG CAAT CTAC                 CTGCCAACCCGACCA  52 62
JLK41_RS01280 NONE
JLK41_RS01275 NONE
JLK41_RS01270  267832 ..  267842 -  -6.8  -2.82623   GGTCGCCGACAATCA                 CAGC ATG GCTG                 GCTGCTACCTCTACG  50 72
JLK41_RS01240 NONE
        lysA  263301 ..  263331 -    -3  -3.12668   TGGTAAAGCGCAATA       GCATGGCGTCGCCC TCA GGCCGGCAGCAGGC       TTTCGCCGGCGTAGA  43 9
        dapF NONE
JLK41_RS01225 NONE
        xerC NONE
JLK41_RS01215  260076 ..  260090 -  -8.5  -3.92324   CTGCGTAACAGGAAA               CCGCC CTCGT GGCGG               TTTTTTGTGCCCGGC  69 43
JLK41_RS01190  256506 ..  256527 -  -3.5  -4.18494   CAGGGGCATTGAAAA           CGACCTGCG TCTT CGCTGCCCG            GCGGCTCAATCGGCG  62 31
JLK41_RS01185  254450 ..  254489 -  -2.1  -3.72695   AGCGTTCGCAGGAAA TCGGCGGCA-TCGTCAGCG TGAT CACCG-CGATTGCCGACCA  GACCAATCTGCTGGC  51 505
JLK41_RS01170  249959 ..  249974 -  -7.5  -3.65902   TCGAGCTGACCGAAA              CGGCG GTGATG CGCCG               CAGCGATCAGGTGCA  63 413
         rep  246288 ..  246338 - -25.1  -3.25823   TTCCTCTCAGATGAA CGTAGCCCGGATGCAAT-CG-GAAC GAT GTCCCCGGATTGCATCCGGGCTACG GAATAAACCTGTTTT 100 98
JLK41_RS01155 NONE
        dadR NONE
        gcvA  236723 ..  236760 - -10.5  -2.78679   GTCGTCGAGCTAAAG   TCAGGCAATCGCGATGG CGGC CCCGCGCAATCGCCCGA    GGAAGCGCGGTCTGC  61 165
JLK41_RS01100  234781 ..  234822 -  -5.3  -3.25015   CTCAACGACCAGCAA CTGCGCGACATCGGCCT-CAC TCGC GCGCAGGCCGA-G-CGCG-AG GTCTGCCTGCCGTTC  51 70
JLK41_RS01090  232988 ..  233001 -  -3.7   -3.1355   GGCACGCAGACGCAA               CGGGC GCAC GCCGG                CCTTTGCAGGCCAAG  45 43
JLK41_RS01075  229392 ..  229410 - -13.1  -4.82901   CGGCGGGCAGAAAAA             GGCCCGC ACAAG GCGGGCC             AAAGGGTGACAAGCA 100 57
JLK41_RS01060  225923 ..  225944 - -15.9  -4.98531   GGCGGAAACGAAAAA           GCCCCAGGT TTTC ACCTGGGGC            TTTTCATTATCTGGC 100 37
JLK41_RS01010  209743 ..  209772 -  -9.1  -2.87132   TGCTTGCCGTACAGA       TGGCGCAGGCCGC CGGC GCGGCCTGCGTGG        ATTACCTCGACGAGC  56 448
JLK41_RS00995  207324 ..  207336 - -10.5  -2.57211   ATCGGCCTGGACAAT                CCGCG CAG CGCGG                TGATCTTCGGTGGCC  57 275
JLK41_RS00940 NONE
JLK41_RS00935 NONE
JLK41_RS00930  194550 ..  194562 -  -3.4  -3.82031   GTAATTACCATGAAA                GAGT GGGGT ACTC                CTGTTATATCTGTTC  54 47
JLK41_RS00925  189758 ..  189787 - -22.3  -3.85698   CTCGCCTGCTACAAA       CAACAAGGGCCGC GAAT GCGGCCCTTGTTG        TTTTCTGCATTACTG 100 35
        flgA  176815 ..  176871 -  -7.3  -3.85698   CGGCCGGCGCAGAAA CGGCAGATCGACCG-GCAGCACGCGCGT CTCT AC-CACGCGGTGCTCGAGCG-CCTGCCG GAGCAGGCCCAGCGC  64 316
        glcD NONE
        glcE NONE
        glcF NONE
JLK41_RS00830  171623 ..  171646 -  -7.5  -3.40597   TCTTTCATCGAAAGA          GGAGAGAGGG GCACA CCCTCT-TCC          GGCACTGCGTGCCAC  56 88
JLK41_RS00825  169277 ..  169303 - -16.6  -3.55444   CGCTCATGCTCGAAA         GCCCCGACGGTC GGA AACCGTCAGGGC         CTGTTGCAGCGCCGT 100 123
JLK41_RS00820  167399 ..  167424 - -15.5  -3.92625   CAGAGGCCAACCAAA         GTCGGGTCGTGC CTG GCACGACCCG-C         GCATGGACTAGCGGC  95 33
JLK41_RS00815  167084 ..  167103 -   -15  -4.55128   AGGGTGAAATGAAAA            CGGCGACC CGAG GGTCGCCG             TTTGTTGAAATGACA 100 46
        lafA  165920 ..  165939 -   -15  -4.05446   GGCCGTAACGAGAAA            CGCCCCGT GAGT ACGGGGCG             TTGGAGGGGGTGGCG  95 69
JLK41_RS00805 NONE
JLK41_RS00800  164003 ..  164020 -  -2.7  -3.33261   GGCCAAGGTCGACAA             CCACCTGA TCG TCA-GCGG             CCACACCGATGCCAC  46 350
        algB NONE
JLK41_RS00705  143620 ..  143641 -  -4.3  -3.09327   TGACGCCAGCGAAGA           CGCCACACG CAGT CTTGCGGCA            TTTCAGCCCTCTCCC  46 106
JLK41_RS00670 NONE
JLK41_RS00665  135670 ..  135698 -  -6.5  -2.81547   CTTCCAGATGAAGTA        CCGCCCGGCCAAC TAC GATGGCCAGCCCG        ATGCCGAGACCGCCG  48 88
JLK41_RS00650  132235 ..  132250 -    -9  -2.50994   TTCAAGCGGATCAAC              GATGGC TACG GCCATC               TGGCCGGGGATCGGG  54 396
JLK41_RS00620  126992 ..  127006 -  -3.4  -5.40072   TTTGCCTGAAAAAAA               GCGGCC GCC AGCGGC               ACTCTGCTGAGCCTC  85 185
JLK41_RS00610  123538 ..  123549 -  -2.2  -3.02144   CCAGGGGGGTGAATA                CCGA CATA TCAG                 ACCTTTATTGCCTTA  41 38
JLK41_RS00605  122230 ..  122252 -  -9.1  -3.14463   AAGCTGGCCGAGCAA           CTGCCGGGA CTGGT TTCCGGCAG           CTGACGGCAAGTTCC  61 367
JLK41_RS00575  117962 ..  117984 -    -7  -4.16016   TCACGCTGCAAGAAA          CGCGCTGCG GATCGT CGCAG-GCG           TTGCGCTACCAGCTG  71 31
JLK41_RS00550  112426 ..  112438 -  -4.7  -3.57144   TGGCGCAGCGGCAAA                GCGGC TCG GGCGC                CGGGGCCTGGCCCCT  52 274
        glsB NONE
JLK41_RS00535  109708 ..  109727 - -12.8  -2.53876   TTCCAGCCGAAGCCA            GCGCCGCC ACCT GGCAGCGC             TTTCTCGACCCCGCC  64 351
JLK41_RS00515  106031 ..  106055 -  -2.9  -3.28712   GCGCTGCGTCGATAA         GGCCTCATTC CATCTC GAAC-AGGCC          GTCACGCAGTTGCGC  44 5
JLK41_RS00495  102652 ..  102681 - -13.6  -3.87869   CTAATCGCGGATAAA       TCCGCTGCTGCG AAACAG CGCAGCAGTGGA        ACGCAGCGTGCTGGC  91 49
JLK41_RS00480   98273 ..   98294 -  -2.1  -3.30771   CTACACCGTCGACAA           GGGGGTGGCC GGT GGCT-CGCCC           GATGATCCGCCCGCC  44 223
JLK41_RS00470   97236 ..   97258 -  -2.7   -3.7941   GAGCGCGCAGAACAA          GGATG-AGGC GCTT GCCTTCATCA           ATCACCTGCTCGATC  56 308
        purE   91403 ..   91421 -  -6.6  -3.53811   CGGACGGCGTGCAAA             GGCGCCGT GTC ACAGCCCC             TGATGGAATGGACTT  58 40
JLK41_RS00435   90140 ..   90198 -  -3.9  -2.81922   CAGCAGGGAAAAGAG GTACTTCA-TGGGAGGCTCTTGAACGAC CACC GTCGTTCAAGAGCTTAGCTGCGAAATGC TCGCTCAGCGCTTGG  41 30
JLK41_RS00430 NONE
JLK41_RS00425   89036 ..   89078 - -11.9  -2.71712   TCGTTGCGGCGAAAG CGGTGGAGCCGGCAGGGCCC GAGT GAGTCCC-CCGGCTCCGCCA GGCGGTTACTCAGCC  65 35
JLK41_RS00420 NONE
JLK41_RS00415   87860 ..   87874 -  -3.5  -2.75343   TGTACAGCTGGAAAG               CGACG AACGG CATCG               ATTGCAGCTACGCCT  41 124
JLK41_RS00395   83608 ..   83626 - -13.1  -4.50058   CAGCTACAACGAAAA             CGCCGGC GACAA GCCGGCG             TTTTGTTTGCTGCCG 100 46
JLK41_RS00385 NONE
JLK41_RS00380 NONE
JLK41_RS00375   81905 ..   81939 - -11.2  -2.78384   TGGCGGGGGATGATA     GCGCGCCGGCCGCTTC AAT GCTGCGGCCAGCGTAC     GGACTTCAGTACCAG  65 31
JLK41_RS00370   80202 ..   80214 -  -5.5  -3.44051   CGGCCACTACGACAA                GCAGG TGA CCTAC                GCCGCGCGCACCATC  53 452
JLK41_RS00360   78741 ..   78762 -  -2.9  -3.11272   GACCAGCATCGAAGA           GGCCATCGAC AAT GCCC-TGGCC           GAATGCGCCAAGAGC  44 123
        trpB NONE
        trpA   66597 ..   66624 -   -17  -5.36441   GTGCCAGAGAAAAAA        GCCGCCGACGGA TCGC TCCGCCAGCGGC         TTCTTCACTTGCCGG 100 49
JLK41_RS00290   62847 ..   62876 -  -2.9  -4.07568   CCCGGGCGGCGAAAA       TGCAGATGATAAC ATTG ATTATCATTTGCG        TATTTCGATGATATG  57 63
JLK41_RS00285 NONE
JLK41_RS00280   59501 ..   59526 - -10.4  -3.32844   GGGCCCATGCGAGAA         GCTGCCAACC GGGGCT GGATGGCAGC          CGACGCTCAGAATCT  68 32
JLK41_RS00270 NONE
JLK41_RS00265   57440 ..   57462 - -13.4  -2.57132   GTTTGGCGGGACAAG           GGGGCGACTC GCT GAGTCGCCCT           TTTTCATTGTGCCTC  72 66
        betC   53825 ..   53837 -  -3.3  -2.52464   CCTGTTTTTAACGCA                GCGAT GGC AACGC                AGGTAGTTTTTAGAG  40 74
        choX NONE
JLK41_RS00240 NONE
JLK41_RS00220   47680 ..   47728 -   -11  -3.53343   AAGCTCGCGGCTAAA GCCCCTCCCACACGTGGCCCGGAT TGC ATCCGGGCCAC-TG-GCTCAGGGC AGCAGGATGGTCGAG  74 19
JLK41_RS00200   43902 ..   43919 - -11.3  -5.33405   GTCACCAAAGAAAAA             GGCTTGC CGTG GCAAGCC              TTTCGGGTAAACGGG 100 43
         fmt NONE
        rsmB NONE
        trkA   40203 ..   40259 -  -8.1  -2.61264   TTGGCCAGCCACAAG CCTC-AAGCTGCAAGCCACAAGCG CTTTACGTGC CGCTTGAAGCTTGCTGCTCAGAAG AACGTCAGGCCGGCC  52 19
JLK41_RS00180   39430 ..   39481 -  -7.9  -2.52464   CCGCGCTGGAATTCA TGGCCGACCGCGAGGCGCGTACGCC CTTC GATGC-CGCGC-TCAAGGTCGGCCC GCGTGTCTCGGCGGC  49 403
        choX   33872 ..   33896 - -12.1  -3.28637   CACCAAGACCATCAA          GGCGGACGC GTCGGGT GCGCCCGCC          GAACTGGACGACTGA  76 87
        ehuB   25808 ..   25838 - -11.9  -2.71364   CTACCGGTCGAAGGA      TTCATGCCGCGCAC CGGC GTGCGCGGCA-GAC       ACCGCAGGTTACTGA  65 34
        ehuC NONE
        ehuD NONE
        ehuA   23406 ..   23423 -  -8.3  -3.18582   TACGGCAGCGAGGAA             GCGGCCG AGAG CGGCTGC              ACCGAAGCCGGAGCC  56 249
        glyQ NONE
JLK41_RS00065 NONE
        gmhB NONE
JLK41_RS00055 NONE
JLK41_RS00050 NONE
JLK41_RS00045 NONE
JLK41_RS00040 NONE
JLK41_RS00035 NONE
JLK41_RS00030 NONE
JLK41_RS00025    6524 ..    6543 - -12.8  -4.37092   ATTGCCTGCAGAAAA            GGCGGGCC GTCA GGCCCACC             AGTAGCGCACCATGT 100 15
