locus-tag class description RK21_RS00015 PF17946 RecC C-terminal domain RK21_RS00020 PF00580 UvrD/REP helicase N-terminal domain RK21_RS00020 PF13361 UvrD-like helicase C-terminal domain RK21_RS00020 PF12705 PD-(D/E)XK nuclease superfamily RK21_RS00025 PF13538 UvrD-like helicase C-terminal domain RK21_RS00035 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS00035 PF17152 Periplasmic sensor domain RK21_RS00045 PF03466 LysR substrate binding domain RK21_RS00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00050 PF00171 Aldehyde dehydrogenase family RK21_RS00055 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RK21_RS00055 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RK21_RS00080 PF02583 Metal-sensitive transcriptional repressor RK21_RS00100 PF00782 Dual specificity phosphatase, catalytic domain RK21_RS00105 PF12147 Putative methyltransferase RK21_RS00105 PF12146 Serine aminopeptidase, S33 RK21_RS00110 PF01066 CDP-alcohol phosphatidyltransferase RK21_RS00115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00115 PF03466 LysR substrate binding domain RK21_RS00130 PF02525 Flavodoxin-like fold RK21_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00135 PF03466 LysR substrate binding domain RK21_RS00145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS00145 PF16591 Helical bimodular sensor domain RK21_RS00145 PF00672 HAMP domain RK21_RS00150 PF04228 Putative neutral zinc metallopeptidase RK21_RS00155 PF00775 Dioxygenase RK21_RS00155 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal RK21_RS00160 PF00775 Dioxygenase RK21_RS00165 PF05958 tRNA (Uracil-5-)-methyltransferase RK21_RS00170 PF00860 Permease family RK21_RS00180 PF01654 Cytochrome bd terminal oxidase subunit I RK21_RS00185 PF02322 Cytochrome bd terminal oxidase subunit II RK21_RS00195 PF05175 Methyltransferase small domain RK21_RS00200 PF03472 Autoinducer binding domain RK21_RS00200 PF00196 Bacterial regulatory proteins, luxR family RK21_RS00205 PF00970 Oxidoreductase FAD-binding domain RK21_RS00205 PF00175 Oxidoreductase NAD-binding domain RK21_RS00210 PF01741 Large-conductance mechanosensitive channel, MscL RK21_RS00215 PF18073 Rubredoxin metal binding domain RK21_RS00220 PF00860 Permease family RK21_RS00225 PF07238 PilZ domain RK21_RS00230 PF13722 5TM C-terminal transporter carbon starvation CstA RK21_RS00230 PF02554 Carbon starvation protein CstA RK21_RS00235 PF04328 Selenoprotein, putative RK21_RS00240 PF07683 Cobalamin synthesis protein cobW C-terminal domain RK21_RS00240 PF02492 CobW/HypB/UreG, nucleotide-binding domain RK21_RS00250 PF01717 Cobalamin-independent synthase, Catalytic domain RK21_RS00250 PF08267 Cobalamin-independent synthase, N-terminal domain RK21_RS00255 PF00108 Thiolase, N-terminal domain RK21_RS00255 PF02803 Thiolase, C-terminal domain RK21_RS00270 PF07055 Enoyl reductase FAD binding domain RK21_RS00270 PF12241 Trans-2-enoyl-CoA reductase catalytic region RK21_RS00270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase RK21_RS00300 PF13411 MerR HTH family regulatory protein RK21_RS00310 PF13426 PAS domain RK21_RS00310 PF01740 STAS domain RK21_RS00315 PF00258 Flavodoxin RK21_RS00320 PF03466 LysR substrate binding domain RK21_RS00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00325 PF03788 LrgA family RK21_RS00330 PF04172 LrgB-like family RK21_RS00335 PF00561 alpha/beta hydrolase fold RK21_RS00340 PF00106 short chain dehydrogenase RK21_RS00350 PF04209 homogentisate 1,2-dioxygenase RK21_RS00355 PF01557 Fumarylacetoacetate (FAA) hydrolase family RK21_RS00360 PF13417 Glutathione S-transferase, N-terminal domain RK21_RS00365 PF13369 Transglutaminase-like superfamily RK21_RS00370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RK21_RS00370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RK21_RS00380 PF06146 Phosphate-starvation-inducible E RK21_RS00420 PF07715 TonB-dependent Receptor Plug Domain RK21_RS00420 PF00593 TonB dependent receptor RK21_RS00425 PF12833 Helix-turn-helix domain RK21_RS00425 PF06445 GyrI-like small molecule binding domain RK21_RS00440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS00440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS00445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00445 PF03466 LysR substrate binding domain RK21_RS00450 PF02321 Outer membrane efflux protein RK21_RS00455 PF04632 Fusaric acid resistance protein family RK21_RS00465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS00465 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS00480 PF03466 LysR substrate binding domain RK21_RS00485 PF07690 Major Facilitator Superfamily RK21_RS00490 PF13533 Biotin-lipoyl like RK21_RS00495 PF02321 Outer membrane efflux protein RK21_RS00500 PF00106 short chain dehydrogenase RK21_RS00505 PF00106 short chain dehydrogenase RK21_RS00515 PF00483 Nucleotidyl transferase RK21_RS00515 PF01050 Mannose-6-phosphate isomerase RK21_RS00520 PF11182 Alginate O-acetyl transferase AlgF RK21_RS00525 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX RK21_RS00530 PF03062 MBOAT, membrane-bound O-acyltransferase family RK21_RS00535 PF05426 Alginate lyase RK21_RS00540 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX RK21_RS00540 PF16824 C-terminal carbohydrate-binding module RK21_RS00545 PF13229 Right handed beta helix region RK21_RS00550 PF13372 Alginate export RK21_RS00555 PF08238 Sel1 repeat RK21_RS00560 PF07238 PilZ domain RK21_RS00570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RK21_RS00570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RK21_RS00570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RK21_RS00575 PF03883 Peroxide stress protein YaaA RK21_RS00585 PF13638 PIN domain RK21_RS00585 PF02562 PhoH-like protein RK21_RS00590 PF01967 MoaC family RK21_RS00595 PF02597 ThiS family RK21_RS00600 PF02391 MoaE protein RK21_RS00605 PF00270 DEAD/DEAH box helicase RK21_RS00605 PF00271 Helicase conserved C-terminal domain RK21_RS00610 PF02230 Phospholipase/Carboxylesterase RK21_RS00615 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS00630 PF00005 ABC transporter RK21_RS00635 PF13180 PDZ domain RK21_RS00640 PF01784 NIF3 (NGG1p interacting factor 3) RK21_RS00645 PF01507 Phosphoadenosine phosphosulfate reductase family RK21_RS00650 PF00009 Elongation factor Tu GTP binding domain RK21_RS00655 PF13404 AsnC-type helix-turn-helix domain RK21_RS00655 PF01037 Lrp/AsnC ligand binding domain RK21_RS00660 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS00675 PF00579 tRNA synthetases class I (W and Y) RK21_RS00680 PF03969 AFG1-like ATPase RK21_RS00690 PF00248 Aldo/keto reductase family RK21_RS00695 PF00572 Ribosomal protein L13 RK21_RS00700 PF00380 Ribosomal protein S9/S16 RK21_RS00705 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RK21_RS00705 PF00355 Rieske [2Fe-2S] domain RK21_RS00710 PF00033 Cytochrome b/b6/petB RK21_RS00710 PF00032 Cytochrome b(C-terminal)/b6/petD RK21_RS00715 PF02167 Cytochrome C1 family RK21_RS00720 PF00043 Glutathione S-transferase, C-terminal domain RK21_RS00720 PF02798 Glutathione S-transferase, N-terminal domain RK21_RS00725 PF04386 Stringent starvation protein B RK21_RS00735 PF04972 BON domain RK21_RS00740 PF13580 SIS domain RK21_RS00745 PF02021 Uncharacterised protein family UPF0102 RK21_RS00750 PF04348 LppC putative lipoprotein RK21_RS00755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS00760 PF02381 MraZ protein, putative antitoxin-like RK21_RS00765 PF01795 MraW methylase family RK21_RS00770 PF04999 Cell division protein FtsL RK21_RS00775 PF03717 Penicillin-binding Protein dimerisation domain RK21_RS00775 PF00905 Penicillin binding protein transpeptidase domain RK21_RS00780 PF01225 Mur ligase family, catalytic domain RK21_RS00780 PF08245 Mur ligase middle domain RK21_RS00780 PF02875 Mur ligase family, glutamate ligase domain RK21_RS00785 PF02875 Mur ligase family, glutamate ligase domain RK21_RS00785 PF01225 Mur ligase family, catalytic domain RK21_RS00785 PF08245 Mur ligase middle domain RK21_RS00790 PF00953 Glycosyl transferase family 4 RK21_RS00790 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RK21_RS00795 PF08245 Mur ligase middle domain RK21_RS00795 PF02875 Mur ligase family, glutamate ligase domain RK21_RS00800 PF01098 Cell cycle protein RK21_RS00805 PF04101 Glycosyltransferase family 28 C-terminal domain RK21_RS00805 PF03033 Glycosyltransferase family 28 N-terminal domain RK21_RS00810 PF01225 Mur ligase family, catalytic domain RK21_RS00810 PF08245 Mur ligase middle domain RK21_RS00810 PF02875 Mur ligase family, glutamate ligase domain RK21_RS00815 PF07478 D-ala D-ala ligase C-terminus RK21_RS00815 PF01820 D-ala D-ala ligase N-terminus RK21_RS00820 PF08478 POTRA domain, FtsQ-type RK21_RS00820 PF03799 Cell division protein FtsQ RK21_RS00825 PF02491 SHS2 domain inserted in FTSA RK21_RS00830 PF12327 FtsZ family, C-terminal domain RK21_RS00830 PF00091 Tubulin/FtsZ family, GTPase domain RK21_RS00835 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RK21_RS00845 PF01043 SecA preprotein cross-linking domain RK21_RS00845 PF07517 SecA DEAD-like domain RK21_RS00845 PF02810 SEC-C motif RK21_RS00845 PF07516 SecA Wing and Scaffold domain RK21_RS00850 PF01960 ArgJ family RK21_RS00860 PF02581 Thiamine monophosphate synthase RK21_RS00865 PF01923 Cobalamin adenosyltransferase RK21_RS00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS00870 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS00870 PF08448 PAS fold RK21_RS00870 PF13188 PAS domain RK21_RS00870 PF00072 Response regulator receiver domain RK21_RS00875 PF02558 Ketopantoate reductase PanE/ApbA RK21_RS00875 PF08546 Ketopantoate reductase PanE/ApbA C terminal RK21_RS00880 PF04461 Protein of unknown function (DUF520) RK21_RS00885 PF05552 Conserved TM helix RK21_RS00885 PF00924 Mechanosensitive ion channel RK21_RS00890 PF07690 Major Facilitator Superfamily RK21_RS00895 PF07690 Major Facilitator Superfamily RK21_RS00915 PF04186 FxsA cytoplasmic membrane protein RK21_RS00920 PF00166 Chaperonin 10 Kd subunit RK21_RS00925 PF00118 TCP-1/cpn60 chaperonin family RK21_RS00935 PF00486 Transcriptional regulatory protein, C terminal RK21_RS00935 PF00072 Response regulator receiver domain RK21_RS00940 PF00672 HAMP domain RK21_RS00940 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS00960 PF00873 AcrB/AcrD/AcrF family RK21_RS00965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS00990 PF00563 EAL domain RK21_RS00990 PF03707 Bacterial signalling protein N terminal repeat RK21_RS00990 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS01005 PF01261 Xylose isomerase-like TIM barrel RK21_RS01010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RK21_RS01010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RK21_RS01015 PF01810 LysE type translocator RK21_RS01020 PF03466 LysR substrate binding domain RK21_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS01025 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family RK21_RS01035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS01080 PF13396 Phospholipase_D-nuclease N-terminal RK21_RS01080 PF13091 PLD-like domain RK21_RS01085 PF01965 DJ-1/PfpI family RK21_RS01100 PF00583 Acetyltransferase (GNAT) family RK21_RS01100 PF00795 Carbon-nitrogen hydrolase RK21_RS01105 PF05681 Fumarate hydratase (Fumerase) RK21_RS01105 PF05683 Fumarase C-terminus RK21_RS01110 PF00970 Oxidoreductase FAD-binding domain RK21_RS01110 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS01110 PF00175 Oxidoreductase NAD-binding domain RK21_RS01115 PF02887 Pyruvate kinase, alpha/beta domain RK21_RS01115 PF00224 Pyruvate kinase, barrel domain RK21_RS01130 PF00929 Exonuclease RK21_RS01130 PF08411 Exonuclease C-terminal RK21_RS01140 PF01842 ACT domain RK21_RS01140 PF00551 Formyl transferase RK21_RS01155 PF13439 Glycosyltransferase Family 4 RK21_RS01155 PF00534 Glycosyl transferases group 1 RK21_RS01160 PF02743 Cache domain RK21_RS01160 PF00672 HAMP domain RK21_RS01160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS01165 PF05872 Bacterial protein of unknown function (DUF853) RK21_RS01170 PF01384 Phosphate transporter family RK21_RS01180 PF01614 Bacterial transcriptional regulator RK21_RS01180 PF09339 IclR helix-turn-helix domain RK21_RS01185 PF07690 Major Facilitator Superfamily RK21_RS01190 PF01144 Coenzyme A transferase RK21_RS01195 PF01144 Coenzyme A transferase RK21_RS01200 PF02803 Thiolase, C-terminal domain RK21_RS01200 PF00108 Thiolase, N-terminal domain RK21_RS01205 PF00083 Sugar (and other) transporter RK21_RS01210 PF10397 Adenylosuccinate lyase C-terminus RK21_RS01210 PF00206 Lyase RK21_RS01215 PF12146 Serine aminopeptidase, S33 RK21_RS01220 PF02627 Carboxymuconolactone decarboxylase family RK21_RS01230 PF03573 outer membrane porin, OprD family RK21_RS01235 PF02321 Outer membrane efflux protein RK21_RS01240 PF00873 AcrB/AcrD/AcrF family RK21_RS01245 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS01245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS01250 PF08361 MAATS-type transcriptional repressor, C-terminal region RK21_RS01250 PF00440 Bacterial regulatory proteins, tetR family RK21_RS01255 PF07690 Major Facilitator Superfamily RK21_RS01265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS01265 PF03466 LysR substrate binding domain RK21_RS01275 PF13460 NAD(P)H-binding RK21_RS01280 PF03466 LysR substrate binding domain RK21_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS01285 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS01285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS01285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS01290 PF06719 AraC-type transcriptional regulator N-terminus RK21_RS01290 PF12833 Helix-turn-helix domain RK21_RS01320 PF00083 Sugar (and other) transporter RK21_RS01325 PF00158 Sigma-54 interaction domain RK21_RS01325 PF00072 Response regulator receiver domain RK21_RS01325 PF02954 Bacterial regulatory protein, Fis family RK21_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS01330 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS01335 PF14310 Fibronectin type III-like domain RK21_RS01335 PF01915 Glycosyl hydrolase family 3 C-terminal domain RK21_RS01335 PF00933 Glycosyl hydrolase family 3 N terminal domain RK21_RS01355 PF01740 STAS domain RK21_RS01355 PF00916 Sulfate permease family RK21_RS01365 PF00561 alpha/beta hydrolase fold RK21_RS01375 PF01479 S4 domain RK21_RS01375 PF00849 RNA pseudouridylate synthase RK21_RS01390 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS01395 PF03167 Uracil DNA glycosylase superfamily RK21_RS01400 PF05145 Transition state regulatory protein AbrB RK21_RS01405 PF01970 Tripartite tricarboxylate transporter TctA family RK21_RS01420 PF03573 outer membrane porin, OprD family RK21_RS01425 PF00072 Response regulator receiver domain RK21_RS01425 PF00486 Transcriptional regulatory protein, C terminal RK21_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS01430 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS01440 PF01571 Aminomethyltransferase folate-binding domain RK21_RS01445 PF03937 Flavinator of succinate dehydrogenase RK21_RS01455 PF02910 Fumarate reductase flavoprotein C-term RK21_RS01455 PF00890 FAD binding domain RK21_RS01460 PF04542 Sigma-70 region 2 RK21_RS01460 PF08281 Sigma-70, region 4 RK21_RS01465 PF03872 Anti sigma-E protein RseA, N-terminal domain RK21_RS01465 PF03873 Anti sigma-E protein RseA, C-terminal domain RK21_RS01470 PF03888 MucB/RseB N-terminal domain RK21_RS01470 PF17188 MucB/RseB C-terminal domain RK21_RS01475 PF13180 PDZ domain RK21_RS01485 PF00679 Elongation factor G C-terminus RK21_RS01485 PF06421 GTP-binding protein LepA C-terminus RK21_RS01485 PF03144 Elongation factor Tu domain 2 RK21_RS01485 PF00009 Elongation factor Tu GTP binding domain RK21_RS01490 PF10502 Signal peptidase, peptidase S26 RK21_RS01495 PF00035 Double-stranded RNA binding motif RK21_RS01495 PF14622 Ribonuclease-III-like RK21_RS01500 PF07650 KH domain RK21_RS01500 PF01926 50S ribosome-binding GTPase RK21_RS01505 PF02565 Recombination protein O C terminal RK21_RS01505 PF11967 Recombination protein O N terminal RK21_RS01510 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RK21_RS01515 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS01515 PF00672 HAMP domain RK21_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS01520 PF00072 Response regulator receiver domain RK21_RS01520 PF00486 Transcriptional regulatory protein, C terminal RK21_RS01530 PF08003 Protein of unknown function (DUF1698) RK21_RS01535 PF13649 Methyltransferase domain RK21_RS01545 PF02190 ATP-dependent protease La (LON) substrate-binding domain RK21_RS01545 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS01545 PF05362 Lon protease (S16) C-terminal proteolytic domain RK21_RS01550 PF01011 PQQ enzyme repeat RK21_RS01555 PF04966 Carbohydrate-selective porin, OprB family RK21_RS01560 PF00593 TonB dependent receptor RK21_RS01560 PF07715 TonB-dependent Receptor Plug Domain RK21_RS01565 PF09905 DNA-binding protein VF530 RK21_RS01575 PF08021 Siderophore-interacting FAD-binding domain RK21_RS01575 PF04954 Siderophore-interacting protein RK21_RS01580 PF03551 Transcriptional regulator PadR-like family RK21_RS01590 PF00324 Amino acid permease RK21_RS01595 PF01645 Conserved region in glutamate synthase RK21_RS01600 PF00270 DEAD/DEAH box helicase RK21_RS01600 PF00271 Helicase conserved C-terminal domain RK21_RS01600 PF08494 DEAD/H associated RK21_RS01605 PF00293 NUDIX domain RK21_RS01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS01610 PF03466 LysR substrate binding domain RK21_RS01615 PF00561 alpha/beta hydrolase fold RK21_RS01620 PF06942 GlpM protein RK21_RS01625 PF00158 Sigma-54 interaction domain RK21_RS01625 PF00072 Response regulator receiver domain RK21_RS01625 PF02954 Bacterial regulatory protein, Fis family RK21_RS01630 PF02743 Cache domain RK21_RS01630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS01630 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS01635 PF00005 ABC transporter RK21_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS01645 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS01650 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS01660 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RK21_RS01660 PF01266 FAD dependent oxidoreductase RK21_RS01665 PF08220 DeoR-like helix-turn-helix domain RK21_RS01665 PF00455 DeoR C terminal sensor domain RK21_RS01670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RK21_RS01670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RK21_RS01675 PF00230 Major intrinsic protein RK21_RS01680 PF04073 Aminoacyl-tRNA editing domain RK21_RS01685 PF00005 ABC transporter RK21_RS01685 PF08402 TOBE domain RK21_RS01690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RK21_RS01690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RK21_RS01695 PF01568 Molydopterin dinucleotide binding domain RK21_RS01695 PF00384 Molybdopterin oxidoreductase RK21_RS01695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS01700 PF00462 Glutaredoxin RK21_RS01705 PF00210 Ferritin-like domain RK21_RS01710 PF04324 BFD-like [2Fe-2S] binding domain RK21_RS01720 PF10417 C-terminal domain of 1-Cys peroxiredoxin RK21_RS01720 PF00578 AhpC/TSA family RK21_RS01725 PF00929 Exonuclease RK21_RS01730 PF01979 Amidohydrolase family RK21_RS01740 PF00764 Arginosuccinate synthase RK21_RS01750 PF00196 Bacterial regulatory proteins, luxR family RK21_RS01750 PF00072 Response regulator receiver domain RK21_RS01760 PF00633 Helix-hairpin-helix motif RK21_RS01760 PF00730 HhH-GPD superfamily base excision DNA repair protein RK21_RS01760 PF10576 Iron-sulfur binding domain of endonuclease III RK21_RS01770 PF04205 FMN-binding domain RK21_RS01775 PF03116 NQR2, RnfD, RnfE family RK21_RS01780 PF02508 Rnf-Nqr subunit, membrane protein RK21_RS01785 PF01588 Putative tRNA binding domain RK21_RS01785 PF09334 tRNA synthetases class I (M) RK21_RS01790 PF10609 NUBPL iron-transfer P-loop NTPase RK21_RS01795 PF00313 'Cold-shock' DNA-binding domain RK21_RS01800 PF00692 dUTPase RK21_RS01810 PF08494 DEAD/H associated RK21_RS01810 PF00271 Helicase conserved C-terminal domain RK21_RS01810 PF00270 DEAD/DEAH box helicase RK21_RS01820 PF04675 DNA ligase N terminus RK21_RS01820 PF01068 ATP dependent DNA ligase domain RK21_RS01820 PF04679 ATP dependent DNA ligase C terminal region RK21_RS01825 PF01068 ATP dependent DNA ligase domain RK21_RS01825 PF04679 ATP dependent DNA ligase C terminal region RK21_RS01825 PF04675 DNA ligase N terminus RK21_RS01830 PF01804 Penicillin amidase RK21_RS01835 PF00392 Bacterial regulatory proteins, gntR family RK21_RS01835 PF00155 Aminotransferase class I and II RK21_RS01840 PF07690 Major Facilitator Superfamily RK21_RS01845 PF01043 SecA preprotein cross-linking domain RK21_RS01845 PF02810 SEC-C motif RK21_RS01845 PF07516 SecA Wing and Scaffold domain RK21_RS01845 PF07517 SecA DEAD-like domain RK21_RS01855 PF02810 SEC-C motif RK21_RS01865 PF05736 OprF membrane domain RK21_RS01865 PF00691 OmpA family RK21_RS01870 PF05736 OprF membrane domain RK21_RS01870 PF00691 OmpA family RK21_RS01890 PF06733 DEAD_2 RK21_RS01890 PF13307 Helicase C-terminal domain RK21_RS01895 PF02449 Beta-galactosidase RK21_RS01895 PF17992 Agarase CBM like domain RK21_RS01900 PF00144 Beta-lactamase RK21_RS01905 PF00223 Photosystem I psaA/psaB protein RK21_RS01905 PF00691 OmpA family RK21_RS01910 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RK21_RS01910 PF01243 Pyridoxamine 5'-phosphate oxidase RK21_RS01925 PF06965 Na+/H+ antiporter 1 RK21_RS01940 PF00005 ABC transporter RK21_RS01945 PF00005 ABC transporter RK21_RS01945 PF12399 Branched-chain amino acid ATP-binding cassette transporter RK21_RS01950 PF11862 Domain of unknown function (DUF3382) RK21_RS01950 PF02653 Branched-chain amino acid transport system / permease component RK21_RS01955 PF02653 Branched-chain amino acid transport system / permease component RK21_RS01960 PF13458 Periplasmic binding protein RK21_RS01975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RK21_RS01975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RK21_RS01980 PF03707 Bacterial signalling protein N terminal repeat RK21_RS01980 PF00563 EAL domain RK21_RS01980 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS01985 PF18339 RapA N-terminal Tudor like domain 1 RK21_RS01985 PF18337 RapA N-terminal Tudor like domain RK21_RS01985 PF00271 Helicase conserved C-terminal domain RK21_RS01985 PF12137 RNA polymerase recycling family C-terminal RK21_RS01985 PF00176 SNF2 family N-terminal domain RK21_RS02015 PF13533 Biotin-lipoyl like RK21_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS02025 PF03466 LysR substrate binding domain RK21_RS02035 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS02035 PF03707 Bacterial signalling protein N terminal repeat RK21_RS02035 PF00563 EAL domain RK21_RS02035 PF13188 PAS domain RK21_RS02040 PF05230 MASE2 domain RK21_RS02040 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS02045 PF12706 Beta-lactamase superfamily domain RK21_RS02050 PF01226 Formate/nitrite transporter RK21_RS02080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS02080 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS02080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS02085 PF01593 Flavin containing amine oxidoreductase RK21_RS02090 PF00795 Carbon-nitrogen hydrolase RK21_RS02100 PF00710 Asparaginase, N-terminal RK21_RS02100 PF17763 Glutaminase/Asparaginase C-terminal domain RK21_RS02105 PF03695 Uncharacterised protein family (UPF0149) RK21_RS02105 PF02810 SEC-C motif RK21_RS02110 PF02798 Glutathione S-transferase, N-terminal domain RK21_RS02115 PF00042 Globin RK21_RS02115 PF00970 Oxidoreductase FAD-binding domain RK21_RS02115 PF00175 Oxidoreductase NAD-binding domain RK21_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS02120 PF03466 LysR substrate binding domain RK21_RS02155 PF00268 Ribonucleotide reductase, small chain RK21_RS02160 PF02867 Ribonucleotide reductase, barrel domain RK21_RS02160 PF03477 ATP cone domain RK21_RS02160 PF00317 Ribonucleotide reductase, all-alpha domain RK21_RS02170 PF00072 Response regulator receiver domain RK21_RS02170 PF00486 Transcriptional regulatory protein, C terminal RK21_RS02175 PF00672 HAMP domain RK21_RS02175 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS02175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS02185 PF01738 Dienelactone hydrolase family RK21_RS02195 PF00486 Transcriptional regulatory protein, C terminal RK21_RS02195 PF00072 Response regulator receiver domain RK21_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS02205 PF00375 Sodium:dicarboxylate symporter family RK21_RS02210 PF01980 tRNA-methyltransferase O RK21_RS02210 PF18389 TrmO C-terminal domain RK21_RS02215 PF07308 Protein of unknown function (DUF1456) RK21_RS02225 PF00117 Glutamine amidotransferase class-I RK21_RS02225 PF03352 Methyladenine glycosylase RK21_RS02225 PF13302 Acetyltransferase (GNAT) domain RK21_RS02225 PF00958 GMP synthase C terminal domain RK21_RS02225 PF13673 Acetyltransferase (GNAT) domain RK21_RS02250 PF04055 Radical SAM superfamily RK21_RS02250 PF18693 TRAM domain RK21_RS02250 PF00919 Uncharacterized protein family UPF0004 RK21_RS02255 PF02705 K+ potassium transporter RK21_RS02265 PF03706 Lysylphosphatidylglycerol synthase TM region RK21_RS02265 PF09924 Uncharacterised conserved protein (DUF2156) RK21_RS02280 PF00817 impB/mucB/samB family RK21_RS02280 PF11798 IMS family HHH motif RK21_RS02290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RK21_RS02290 PF03129 Anticodon binding domain RK21_RS02290 PF04073 Aminoacyl-tRNA editing domain RK21_RS02295 PF03573 outer membrane porin, OprD family RK21_RS02305 PF04102 SlyX RK21_RS02310 PF00313 'Cold-shock' DNA-binding domain RK21_RS02315 PF00210 Ferritin-like domain RK21_RS02330 PF01336 OB-fold nucleic acid binding domain RK21_RS02330 PF00152 tRNA synthetases class II (D, K and N) RK21_RS02330 PF02938 GAD domain RK21_RS02335 PF01709 Transcriptional regulator RK21_RS02340 PF02075 Crossover junction endodeoxyribonuclease RuvC RK21_RS02345 PF07499 RuvA, C-terminal domain RK21_RS02345 PF01330 RuvA N terminal domain RK21_RS02350 PF05496 Holliday junction DNA helicase RuvB P-loop domain RK21_RS02350 PF05491 RuvB C-terminal winged helix domain RK21_RS02350 PF17864 RuvB AAA lid domain RK21_RS02355 PF03061 Thioesterase superfamily RK21_RS02360 PF01618 MotA/TolQ/ExbB proton channel family RK21_RS02365 PF02472 Biopolymer transport protein ExbD/TolR RK21_RS02375 PF04052 TolB amino-terminal domain RK21_RS02375 PF07676 WD40-like Beta Propeller Repeat RK21_RS02380 PF00691 OmpA family RK21_RS02385 PF16331 TolA binding protein trimerisation RK21_RS02385 PF13525 Outer membrane lipoprotein RK21_RS02390 PF04055 Radical SAM superfamily RK21_RS02395 PF06508 Queuosine biosynthesis protein QueC RK21_RS02410 PF00672 HAMP domain RK21_RS02410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS02415 PF00324 Amino acid permease RK21_RS02425 PF02445 Quinolinate synthetase A protein RK21_RS02430 PF01435 Peptidase family M48 RK21_RS02435 PF01206 Sulfurtransferase TusA RK21_RS02440 PF01594 AI-2E family transporter RK21_RS02445 PF00578 AhpC/TSA family RK21_RS02455 PF00701 Dihydrodipicolinate synthetase family RK21_RS02460 PF06804 NlpB/DapX lipoprotein RK21_RS02465 PF00753 Metallo-beta-lactamase superfamily RK21_RS02470 PF01259 SAICAR synthetase RK21_RS02515 PF06965 Na+/H+ antiporter 1 RK21_RS02520 PF02386 Cation transport protein RK21_RS02525 PF13978 Protein of unknown function (DUF4223) RK21_RS02530 PF05544 Proline racemase RK21_RS02535 PF06039 Malate:quinone oxidoreductase (Mqo) RK21_RS02550 PF01022 Bacterial regulatory protein, arsR family RK21_RS02555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS02560 PF01266 FAD dependent oxidoreductase RK21_RS02565 PF00171 Aldehyde dehydrogenase family RK21_RS02570 PF00701 Dihydrodipicolinate synthetase family RK21_RS02575 PF05544 Proline racemase RK21_RS02580 PF13520 Amino acid permease RK21_RS02585 PF12833 Helix-turn-helix domain RK21_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS02590 PF03466 LysR substrate binding domain RK21_RS02595 PF00994 Probable molybdopterin binding domain RK21_RS02600 PF01062 Bestrophin, RFP-TM, chloride channel RK21_RS02605 PF04055 Radical SAM superfamily RK21_RS02605 PF06463 Molybdenum Cofactor Synthesis C RK21_RS02610 PF00384 Molybdopterin oxidoreductase RK21_RS02615 PF01037 Lrp/AsnC ligand binding domain RK21_RS02615 PF13404 AsnC-type helix-turn-helix domain RK21_RS02620 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS02635 PF00884 Sulfatase RK21_RS02635 PF08019 Phosphoethanolamine transferase EptA/EptB RK21_RS02640 PF00570 HRDC domain RK21_RS02640 PF01612 3'-5' exonuclease RK21_RS02645 PF05166 YcgL domain RK21_RS02650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS02655 PF00881 Nitroreductase family RK21_RS02660 PF03692 Putative zinc- or iron-chelating domain RK21_RS02670 PF13333 Integrase core domain RK21_RS02670 PF00665 Integrase core domain RK21_RS02670 PF13276 HTH-like domain RK21_RS02690 PF01844 HNH endonuclease RK21_RS02700 PF00326 Prolyl oligopeptidase family RK21_RS02700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RK21_RS02710 PF13230 Glutamine amidotransferases class-II RK21_RS02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS02720 PF03466 LysR substrate binding domain RK21_RS02725 PF07690 Major Facilitator Superfamily RK21_RS02730 PF03746 LamB/YcsF family RK21_RS02735 PF02682 Carboxyltransferase domain, subdomain C and D RK21_RS02740 PF02626 Carboxyltransferase domain, subdomain A and B RK21_RS02760 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS02770 PF00005 ABC transporter RK21_RS02770 PF00664 ABC transporter transmembrane region RK21_RS02775 PF00127 Copper binding proteins, plastocyanin/azurin family RK21_RS02780 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RK21_RS02805 PF00501 AMP-binding enzyme RK21_RS02805 PF13193 AMP-binding enzyme C-terminal domain RK21_RS02805 PF00668 Condensation domain RK21_RS02805 PF00550 Phosphopantetheine attachment site RK21_RS02805 PF00975 Thioesterase domain RK21_RS02810 PF00550 Phosphopantetheine attachment site RK21_RS02810 PF13193 AMP-binding enzyme C-terminal domain RK21_RS02810 PF07993 Male sterility protein RK21_RS02810 PF00501 AMP-binding enzyme RK21_RS02810 PF00668 Condensation domain RK21_RS02815 PF00501 AMP-binding enzyme RK21_RS02815 PF13193 AMP-binding enzyme C-terminal domain RK21_RS02815 PF00550 Phosphopantetheine attachment site RK21_RS02815 PF00668 Condensation domain RK21_RS02820 PF07715 TonB-dependent Receptor Plug Domain RK21_RS02820 PF07660 Secretin and TonB N terminus short domain RK21_RS02820 PF00593 TonB dependent receptor RK21_RS02845 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) RK21_RS02870 PF03631 Virulence factor BrkB RK21_RS02875 PF01327 Polypeptide deformylase RK21_RS02895 PF03795 YCII-related domain RK21_RS02905 PF08281 Sigma-70, region 4 RK21_RS02905 PF04542 Sigma-70 region 2 RK21_RS02910 PF01575 MaoC like domain RK21_RS02915 PF12146 Serine aminopeptidase, S33 RK21_RS02920 PF00501 AMP-binding enzyme RK21_RS02920 PF13193 AMP-binding enzyme C-terminal domain RK21_RS02925 PF13193 AMP-binding enzyme C-terminal domain RK21_RS02925 PF00501 AMP-binding enzyme RK21_RS02930 PF01266 FAD dependent oxidoreductase RK21_RS02935 PF00120 Glutamine synthetase, catalytic domain RK21_RS02940 PF00270 DEAD/DEAH box helicase RK21_RS02940 PF11898 Domain of unknown function (DUF3418) RK21_RS02940 PF04408 Helicase associated domain (HA2) RK21_RS02940 PF00271 Helicase conserved C-terminal domain RK21_RS02940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold RK21_RS02945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RK21_RS02945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RK21_RS02960 PF00664 ABC transporter transmembrane region RK21_RS02960 PF00005 ABC transporter RK21_RS02965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RK21_RS02970 PF00561 alpha/beta hydrolase fold RK21_RS02985 PF02525 Flavodoxin-like fold RK21_RS02990 PF00892 EamA-like transporter family RK21_RS02995 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RK21_RS03000 PF00924 Mechanosensitive ion channel RK21_RS03005 PF00270 DEAD/DEAH box helicase RK21_RS03005 PF00271 Helicase conserved C-terminal domain RK21_RS03025 PF00892 EamA-like transporter family RK21_RS03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS03035 PF03466 LysR substrate binding domain RK21_RS03040 PF00474 Sodium:solute symporter family RK21_RS03045 PF00491 Arginase family RK21_RS03050 PF03466 LysR substrate binding domain RK21_RS03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS03055 PF08447 PAS fold RK21_RS03055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS03065 PF02321 Outer membrane efflux protein RK21_RS03070 PF04304 Protein of unknown function (DUF454) RK21_RS03080 PF00570 HRDC domain RK21_RS03080 PF09382 RQC domain RK21_RS03080 PF16124 RecQ zinc-binding RK21_RS03080 PF00271 Helicase conserved C-terminal domain RK21_RS03080 PF00270 DEAD/DEAH box helicase RK21_RS03090 PF01734 Patatin-like phospholipase RK21_RS03105 PF06719 AraC-type transcriptional regulator N-terminus RK21_RS03105 PF12833 Helix-turn-helix domain RK21_RS03120 PF12833 Helix-turn-helix domain RK21_RS03120 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RK21_RS03125 PF02386 Cation transport protein RK21_RS03130 PF00881 Nitroreductase family RK21_RS03135 PF00672 HAMP domain RK21_RS03135 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS03135 PF16750 Sensor domain of 2-component histidine kinase RK21_RS03135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS03145 PF00486 Transcriptional regulatory protein, C terminal RK21_RS03145 PF00072 Response regulator receiver domain RK21_RS03150 PF03795 YCII-related domain RK21_RS03155 PF04279 Intracellular septation protein A RK21_RS03160 PF02811 PHP domain RK21_RS03165 PF01300 Telomere recombination RK21_RS03170 PF02616 Segregation and condensation protein ScpA RK21_RS03175 PF04079 Segregation and condensation complex subunit ScpB RK21_RS03180 PF01479 S4 domain RK21_RS03180 PF00849 RNA pseudouridylate synthase RK21_RS03185 PF00324 Amino acid permease RK21_RS03190 PF03466 LysR substrate binding domain RK21_RS03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS03195 PF01565 FAD binding domain RK21_RS03195 PF02913 FAD linked oxidases, C-terminal domain RK21_RS03195 PF13183 4Fe-4S dicluster domain RK21_RS03200 PF07690 Major Facilitator Superfamily RK21_RS03205 PF01329 Pterin 4 alpha carbinolamine dehydratase RK21_RS03210 PF00351 Biopterin-dependent aromatic amino acid hydroxylase RK21_RS03215 PF18024 Helix-turn-helix domain RK21_RS03215 PF00158 Sigma-54 interaction domain RK21_RS03225 PF16177 Acetyl-coenzyme A synthetase N-terminus RK21_RS03225 PF13193 AMP-binding enzyme C-terminal domain RK21_RS03225 PF00501 AMP-binding enzyme RK21_RS03230 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS03245 PF00005 ABC transporter RK21_RS03250 PF12833 Helix-turn-helix domain RK21_RS03255 PF00202 Aminotransferase class-III RK21_RS03260 PF04958 Arginine N-succinyltransferase beta subunit RK21_RS03265 PF04958 Arginine N-succinyltransferase beta subunit RK21_RS03270 PF00171 Aldehyde dehydrogenase family RK21_RS03275 PF04996 Succinylarginine dihydrolase RK21_RS03285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RK21_RS03295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RK21_RS03295 PF02272 DHHA1 domain RK21_RS03295 PF01411 tRNA synthetases class II (A) RK21_RS03300 PF00696 Amino acid kinase family RK21_RS03300 PF13840 ACT domain RK21_RS03300 PF01842 ACT domain RK21_RS03305 PF02599 Global regulator protein family RK21_RS03330 PF00571 CBS domain RK21_RS03330 PF01769 Divalent cation transporter RK21_RS03330 PF03448 MgtE intracellular N domain RK21_RS03335 PF03869 Arc-like DNA binding domain RK21_RS03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS03360 PF03466 LysR substrate binding domain RK21_RS03365 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS03370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK21_RS03375 PF02817 e3 binding domain RK21_RS03375 PF00364 Biotin-requiring enzyme RK21_RS03375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RK21_RS03380 PF02779 Transketolase, pyrimidine binding domain RK21_RS03380 PF02780 Transketolase, C-terminal domain RK21_RS03385 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal RK21_RS03385 PF00676 Dehydrogenase E1 component RK21_RS03390 PF01037 Lrp/AsnC ligand binding domain RK21_RS03395 PF00120 Glutamine synthetase, catalytic domain RK21_RS03400 PF07690 Major Facilitator Superfamily RK21_RS03405 PF07238 PilZ domain RK21_RS03405 PF07317 Flagellar regulator YcgR RK21_RS03425 PF00072 Response regulator receiver domain RK21_RS03425 PF01584 CheW-like domain RK21_RS03430 PF01739 CheR methyltransferase, SAM binding domain RK21_RS03430 PF03705 CheR methyltransferase, all-alpha domain RK21_RS03445 PF00460 Flagella basal body rod protein RK21_RS03450 PF00460 Flagella basal body rod protein RK21_RS03450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RK21_RS03455 PF03963 Flagellar hook capping protein - N-terminal region RK21_RS03460 PF07559 Flagellar basal body protein FlaE RK21_RS03460 PF00460 Flagella basal body rod protein RK21_RS03460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RK21_RS03470 PF00460 Flagella basal body rod protein RK21_RS03470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RK21_RS03475 PF00460 Flagella basal body rod protein RK21_RS03475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RK21_RS03480 PF02107 Flagellar L-ring protein RK21_RS03485 PF02119 Flagellar P-ring protein RK21_RS03490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RK21_RS03490 PF10135 Rod binding protein RK21_RS03495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RK21_RS03495 PF00460 Flagella basal body rod protein RK21_RS03505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RK21_RS03505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RK21_RS03510 PF00669 Bacterial flagellin N-terminal helical region RK21_RS03510 PF00700 Bacterial flagellin C-terminal helical region RK21_RS03520 PF07195 Flagellar hook-associated protein 2 C-terminus RK21_RS03520 PF07196 Flagellin hook IN motif RK21_RS03520 PF02465 Flagellar hook-associated protein 2 N-terminus RK21_RS03525 PF02561 Flagellar protein FliS RK21_RS03535 PF02954 Bacterial regulatory protein, Fis family RK21_RS03535 PF06490 Flagellar regulatory protein FleQ RK21_RS03535 PF00158 Sigma-54 interaction domain RK21_RS03540 PF13188 PAS domain RK21_RS03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS03540 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS03545 PF00158 Sigma-54 interaction domain RK21_RS03545 PF00072 Response regulator receiver domain RK21_RS03545 PF02954 Bacterial regulatory protein, Fis family RK21_RS03550 PF02049 Flagellar hook-basal body complex protein FliE RK21_RS03555 PF08345 Flagellar M-ring protein C-terminal RK21_RS03555 PF01514 Secretory protein of YscJ/FliF family RK21_RS03560 PF01706 FliG C-terminal domain RK21_RS03560 PF14842 FliG N-terminal domain RK21_RS03560 PF14841 FliG middle domain RK21_RS03570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RK21_RS03570 PF18269 T3SS EscN ATPase C-terminal domain RK21_RS03575 PF02050 Flagellar FliJ protein RK21_RS03580 PF13466 STAS domain RK21_RS03585 PF00072 Response regulator receiver domain RK21_RS03585 PF00486 Transcriptional regulatory protein, C terminal RK21_RS03605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RK21_RS03605 PF02154 Flagellar motor switch protein FliM RK21_RS03610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RK21_RS03615 PF04347 Flagellar biosynthesis protein, FliO RK21_RS03620 PF00813 FliP family RK21_RS03625 PF01313 Bacterial export proteins, family 3 RK21_RS03630 PF01311 Bacterial export proteins, family 1 RK21_RS03635 PF01312 FlhB HrpN YscU SpaS Family RK21_RS03640 PF00771 FHIPEP family RK21_RS03645 PF00448 SRP54-type protein, GTPase domain RK21_RS03650 PF10609 NUBPL iron-transfer P-loop NTPase RK21_RS03655 PF04542 Sigma-70 region 2 RK21_RS03655 PF04545 Sigma-70, region 4 RK21_RS03655 PF04539 Sigma-70 region 3 RK21_RS03660 PF00072 Response regulator receiver domain RK21_RS03665 PF04344 Chemotaxis phosphatase, CheZ RK21_RS03670 PF02895 Signal transducing histidine kinase, homodimeric domain RK21_RS03670 PF01584 CheW-like domain RK21_RS03670 PF00072 Response regulator receiver domain RK21_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS03670 PF01627 Hpt domain RK21_RS03675 PF00072 Response regulator receiver domain RK21_RS03675 PF01339 CheB methylesterase RK21_RS03680 PF01618 MotA/TolQ/ExbB proton channel family RK21_RS03685 PF13677 Membrane MotB of proton-channel complex MotA/MotB RK21_RS03685 PF00691 OmpA family RK21_RS03690 PF13614 AAA domain RK21_RS03700 PF01584 CheW-like domain RK21_RS03710 PF11647 Membrane Localization Domain RK21_RS03735 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS03750 PF12833 Helix-turn-helix domain RK21_RS03750 PF12852 Cupin RK21_RS03755 PF01312 FlhB HrpN YscU SpaS Family RK21_RS03770 PF00005 ABC transporter RK21_RS03775 PF03379 CcmB protein RK21_RS03780 PF01578 Cytochrome C assembly protein RK21_RS03785 PF04995 Heme exporter protein D (CcmD) RK21_RS03790 PF03100 CcmE RK21_RS03795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RK21_RS03795 PF01578 Cytochrome C assembly protein RK21_RS03800 PF08534 Redoxin RK21_RS03805 PF03918 Cytochrome C biogenesis protein RK21_RS03820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS03820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS03825 PF02567 Phenazine biosynthesis-like protein RK21_RS03835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS03850 PF01177 Asp/Glu/Hydantoin racemase RK21_RS03855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RK21_RS03860 PF01037 Lrp/AsnC ligand binding domain RK21_RS03870 PF10672 S-adenosylmethionine-dependent methyltransferase RK21_RS03870 PF01170 Putative RNA methylase family UPF0020 RK21_RS03870 PF02926 THUMP domain RK21_RS03880 PF00027 Cyclic nucleotide-binding domain RK21_RS03880 PF00520 Ion transport protein RK21_RS03890 PF00224 Pyruvate kinase, barrel domain RK21_RS03890 PF02887 Pyruvate kinase, alpha/beta domain RK21_RS03895 PF05161 MOFRL family RK21_RS03895 PF13660 Domain of unknown function (DUF4147) RK21_RS03900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RK21_RS03900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RK21_RS03905 PF01261 Xylose isomerase-like TIM barrel RK21_RS03910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS03910 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS03910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS03915 PF03928 Haem-degrading RK21_RS03920 PF00440 Bacterial regulatory proteins, tetR family RK21_RS03920 PF08360 QacR-like protein, C-terminal region RK21_RS03925 PF05661 Protein of unknown function (DUF808) RK21_RS03940 PF00860 Permease family RK21_RS03950 PF04115 Ureidoglycolate lyase RK21_RS03955 PF09349 OHCU decarboxylase RK21_RS03955 PF01014 Uricase RK21_RS03965 PF00576 HIUase/Transthyretin family RK21_RS03975 PF00860 Permease family RK21_RS03985 PF00230 Major intrinsic protein RK21_RS03990 PF01979 Amidohydrolase family RK21_RS04000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RK21_RS04000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RK21_RS04005 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS04005 PF01799 [2Fe-2S] binding domain RK21_RS04015 PF02463 RecF/RecN/SMC N terminal domain RK21_RS04020 PF04354 ZipA, C-terminal FtsZ-binding domain RK21_RS04025 PF01653 NAD-dependent DNA ligase adenylation domain RK21_RS04025 PF03120 NAD-dependent DNA ligase OB-fold domain RK21_RS04025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RK21_RS04025 PF12826 Helix-hairpin-helix motif RK21_RS04025 PF00533 BRCA1 C Terminus (BRCT) domain RK21_RS04050 PF00376 MerR family regulatory protein RK21_RS04050 PF09278 MerR, DNA binding RK21_RS04060 PF00892 EamA-like transporter family RK21_RS04065 PF12170 DNA polymerase III tau subunit V interacting with alpha RK21_RS04065 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RK21_RS04065 PF12169 DNA polymerase III subunits gamma and tau domain III RK21_RS04070 PF02575 YbaB/EbfC DNA-binding family RK21_RS04075 PF13662 Toprim domain RK21_RS04075 PF02132 RecR protein RK21_RS04080 PF00156 Phosphoribosyl transferase domain RK21_RS04085 PF13545 Crp-like helix-turn-helix domain RK21_RS04085 PF00027 Cyclic nucleotide-binding domain RK21_RS04090 PF04055 Radical SAM superfamily RK21_RS04090 PF06969 HemN C-terminal domain RK21_RS04105 PF00403 Heavy-metal-associated domain RK21_RS04115 PF13746 4Fe-4S dicluster domain RK21_RS04115 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RK21_RS04115 PF12801 4Fe-4S binding domain RK21_RS04120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS04120 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RK21_RS04135 PF00115 Cytochrome C and Quinol oxidase polypeptide I RK21_RS04140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS04140 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RK21_RS04155 PF00115 Cytochrome C and Quinol oxidase polypeptide I RK21_RS04165 PF06865 Pyrimidine/purine nucleoside phosphorylase RK21_RS04190 PF00550 Phosphopantetheine attachment site RK21_RS04190 PF00501 AMP-binding enzyme RK21_RS04190 PF00550 Phosphopantetheine attachment site RK21_RS04190 PF00668 Condensation domain RK21_RS04190 PF00668 Condensation domain RK21_RS04190 PF13193 AMP-binding enzyme C-terminal domain RK21_RS04190 PF00501 AMP-binding enzyme RK21_RS04190 PF13193 AMP-binding enzyme C-terminal domain RK21_RS04195 PF00005 ABC transporter RK21_RS04205 PF13098 Thioredoxin-like domain RK21_RS04210 PF00578 AhpC/TSA family RK21_RS04215 PF11412 Disulphide bond corrector protein DsbC RK21_RS04215 PF02683 Cytochrome C biogenesis protein transmembrane region RK21_RS04220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RK21_RS04225 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS04225 PF01799 [2Fe-2S] binding domain RK21_RS04230 PF00034 Cytochrome c RK21_RS04230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS04260 PF00486 Transcriptional regulatory protein, C terminal RK21_RS04260 PF00072 Response regulator receiver domain RK21_RS04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS04265 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS04265 PF08521 Two-component sensor kinase N-terminal RK21_RS04270 PF00202 Aminotransferase class-III RK21_RS04280 PF07859 alpha/beta hydrolase fold RK21_RS04300 PF02321 Outer membrane efflux protein RK21_RS04305 PF02687 FtsX-like permease family RK21_RS04305 PF00005 ABC transporter RK21_RS04305 PF12704 MacB-like periplasmic core domain RK21_RS04310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS04325 PF00083 Sugar (and other) transporter RK21_RS04325 PF08946 Osmosensory transporter coiled coil RK21_RS04335 PF01012 Electron transfer flavoprotein domain RK21_RS04340 PF00766 Electron transfer flavoprotein FAD-binding domain RK21_RS04340 PF01012 Electron transfer flavoprotein domain RK21_RS04355 PF00691 OmpA family RK21_RS04355 PF05736 OprF membrane domain RK21_RS04360 PF00392 Bacterial regulatory proteins, gntR family RK21_RS04360 PF00155 Aminotransferase class I and II RK21_RS04370 PF03692 Putative zinc- or iron-chelating domain RK21_RS04375 PF01852 START domain RK21_RS04380 PF00285 Citrate synthase, C-terminal domain RK21_RS04385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RK21_RS04390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RK21_RS04395 PF02910 Fumarate reductase flavoprotein C-term RK21_RS04395 PF00890 FAD binding domain RK21_RS04400 PF13085 2Fe-2S iron-sulfur cluster binding domain RK21_RS04405 PF02779 Transketolase, pyrimidine binding domain RK21_RS04405 PF00676 Dehydrogenase E1 component RK21_RS04405 PF16078 2-oxoglutarate dehydrogenase N-terminus RK21_RS04405 PF16870 2-oxoglutarate dehydrogenase C-terminal RK21_RS04410 PF02817 e3 binding domain RK21_RS04410 PF00364 Biotin-requiring enzyme RK21_RS04410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RK21_RS04415 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS04415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK21_RS04420 PF00549 CoA-ligase RK21_RS04420 PF08442 ATP-grasp domain RK21_RS04425 PF02629 CoA binding domain RK21_RS04425 PF00549 CoA-ligase RK21_RS04430 PF05525 Branched-chain amino acid transport protein RK21_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS04455 PF00183 Hsp90 protein RK21_RS04465 PF05726 Pirin C-terminal cupin domain RK21_RS04465 PF02678 Pirin RK21_RS04475 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS04475 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS04480 PF07977 FabA-like domain RK21_RS04485 PF01627 Hpt domain RK21_RS04485 PF00672 HAMP domain RK21_RS04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS04485 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS04485 PF00072 Response regulator receiver domain RK21_RS04485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS04495 PF07715 TonB-dependent Receptor Plug Domain RK21_RS04495 PF00593 TonB dependent receptor RK21_RS04500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RK21_RS04500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RK21_RS04520 PF12697 Alpha/beta hydrolase family RK21_RS04530 PF01594 AI-2E family transporter RK21_RS04540 PF03814 Potassium-transporting ATPase A subunit RK21_RS04550 PF02669 K+-transporting ATPase, c chain RK21_RS04555 PF02702 Osmosensitive K+ channel His kinase sensor domain RK21_RS04555 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS04555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS04555 PF13493 Domain of unknown function (DUF4118) RK21_RS04555 PF13492 GAF domain RK21_RS04560 PF00486 Transcriptional regulatory protein, C terminal RK21_RS04560 PF00072 Response regulator receiver domain RK21_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS04580 PF03466 LysR substrate binding domain RK21_RS04585 PF00202 Aminotransferase class-III RK21_RS04605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RK21_RS04605 PF00005 ABC transporter RK21_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS04610 PF12911 N-terminal TM domain of oligopeptide transport permease C RK21_RS04615 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS04620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS04625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS04630 PF01464 Transglycosylase SLT domain RK21_RS04630 PF01476 LysM domain RK21_RS04635 PF00753 Metallo-beta-lactamase superfamily RK21_RS04635 PF16123 Hydroxyacylglutathione hydrolase C-terminus RK21_RS04645 PF00075 RNase H RK21_RS04650 PF00929 Exonuclease RK21_RS04655 PF01276 Orn/Lys/Arg decarboxylase, major domain RK21_RS04655 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain RK21_RS04655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RK21_RS04665 PF03358 NADPH-dependent FMN reductase RK21_RS04675 PF00196 Bacterial regulatory proteins, luxR family RK21_RS04675 PF03472 Autoinducer binding domain RK21_RS04700 PF00361 Proton-conducting membrane transporter RK21_RS04705 PF00361 Proton-conducting membrane transporter RK21_RS04710 PF00361 Proton-conducting membrane transporter RK21_RS04710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RK21_RS04715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RK21_RS04720 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RK21_RS04725 PF12838 4Fe-4S dicluster domain RK21_RS04730 PF00146 NADH dehydrogenase RK21_RS04735 PF00384 Molybdopterin oxidoreductase RK21_RS04735 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RK21_RS04735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS04740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RK21_RS04740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RK21_RS04750 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RK21_RS04750 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RK21_RS04755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RK21_RS04760 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RK21_RS04765 PF07947 YhhN family RK21_RS04780 PF00463 Isocitrate lyase family RK21_RS04790 PF01740 STAS domain RK21_RS04790 PF00916 Sulfate permease family RK21_RS04795 PF14492 Elongation Factor G, domain II RK21_RS04795 PF00009 Elongation factor Tu GTP binding domain RK21_RS04795 PF03764 Elongation factor G, domain IV RK21_RS04795 PF00679 Elongation factor G C-terminus RK21_RS04795 PF03144 Elongation factor Tu domain 2 RK21_RS04810 PF00202 Aminotransferase class-III RK21_RS04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS04815 PF03466 LysR substrate binding domain RK21_RS04820 PF00324 Amino acid permease RK21_RS04825 PF03061 Thioesterase superfamily RK21_RS04825 PF01008 Initiation factor 2 subunit family RK21_RS04830 PF00043 Glutathione S-transferase, C-terminal domain RK21_RS04830 PF02798 Glutathione S-transferase, N-terminal domain RK21_RS04835 PF01384 Phosphate transporter family RK21_RS04840 PF04343 Protein of unknown function, DUF488 RK21_RS04855 PF00072 Response regulator receiver domain RK21_RS04855 PF00196 Bacterial regulatory proteins, luxR family RK21_RS04860 PF08459 UvrC Helix-hairpin-helix N-terminal RK21_RS04860 PF01541 GIY-YIG catalytic domain RK21_RS04860 PF02151 UvrB/uvrC motif RK21_RS04865 PF01066 CDP-alcohol phosphatidyltransferase RK21_RS04875 PF00589 Phage integrase family RK21_RS04875 PF14659 Phage integrase, N-terminal SAM-like domain RK21_RS04875 PF13356 Arm DNA-binding domain RK21_RS04880 PF05717 IS66 Orf2 like protein RK21_RS04955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS04955 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS04955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS04955 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS04960 PF00881 Nitroreductase family RK21_RS04975 PF12833 Helix-turn-helix domain RK21_RS04975 PF14525 AraC-binding-like domain RK21_RS04980 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS04980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS04980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS04985 PF02515 CoA-transferase family III RK21_RS04990 PF00501 AMP-binding enzyme RK21_RS04990 PF13193 AMP-binding enzyme C-terminal domain RK21_RS04995 PF00108 Thiolase, N-terminal domain RK21_RS04995 PF02803 Thiolase, C-terminal domain RK21_RS05000 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS05005 PF00106 short chain dehydrogenase RK21_RS05010 PF03573 outer membrane porin, OprD family RK21_RS05020 PF01527 Transposase RK21_RS05025 PF13333 Integrase core domain RK21_RS05025 PF00665 Integrase core domain RK21_RS05025 PF13276 HTH-like domain RK21_RS05045 PF13362 Toprim domain RK21_RS05045 PF18818 Metallopeptidase superfamily domain RK21_RS05045 PF08401 Domain of unknown function (DUF1738) RK21_RS05130 PF07690 Major Facilitator Superfamily RK21_RS05180 PF04002 RadC-like JAB domain RK21_RS05195 PF01131 DNA topoisomerase RK21_RS05195 PF01751 Toprim domain RK21_RS05240 PF13614 AAA domain RK21_RS05265 PF02028 BCCT, betaine/carnitine/choline family transporter RK21_RS05270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS05270 PF00672 HAMP domain RK21_RS05270 PF17200 Single Cache domain 2 RK21_RS05280 PF13556 PucR C-terminal helix-turn-helix domain RK21_RS05285 PF01965 DJ-1/PfpI family RK21_RS05285 PF12833 Helix-turn-helix domain RK21_RS05290 PF00324 Amino acid permease RK21_RS05295 PF02633 Creatinine amidohydrolase RK21_RS05300 PF13416 Bacterial extracellular solute-binding protein RK21_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS05315 PF08402 TOBE domain RK21_RS05315 PF00005 ABC transporter RK21_RS05325 PF00557 Metallopeptidase family M24 RK21_RS05325 PF01321 Creatinase/Prolidase N-terminal domain RK21_RS05330 PF07690 Major Facilitator Superfamily RK21_RS05360 PF05947 Type VI secretion system, TssF RK21_RS05370 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RK21_RS05395 PF00672 HAMP domain RK21_RS05395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS05400 PF00563 EAL domain RK21_RS05400 PF03707 Bacterial signalling protein N terminal repeat RK21_RS05400 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS05410 PF07729 FCD domain RK21_RS05410 PF00392 Bacterial regulatory proteins, gntR family RK21_RS05415 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS05415 PF01464 Transglycosylase SLT domain RK21_RS05420 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS05430 PF00005 ABC transporter RK21_RS05435 PF02780 Transketolase, C-terminal domain RK21_RS05435 PF02779 Transketolase, pyrimidine binding domain RK21_RS05440 PF00456 Transketolase, thiamine diphosphate binding domain RK21_RS05445 PF07690 Major Facilitator Superfamily RK21_RS05455 PF03466 LysR substrate binding domain RK21_RS05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS05460 PF07690 Major Facilitator Superfamily RK21_RS05475 PF00717 Peptidase S24-like RK21_RS05480 PF01381 Helix-turn-helix RK21_RS05480 PF00717 Peptidase S24-like RK21_RS05485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RK21_RS05485 PF00364 Biotin-requiring enzyme RK21_RS05485 PF00289 Biotin carboxylase, N-terminal domain RK21_RS05485 PF02785 Biotin carboxylase C-terminal domain RK21_RS05495 PF01039 Carboxyl transferase domain RK21_RS05500 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS05505 PF00501 AMP-binding enzyme RK21_RS05505 PF13193 AMP-binding enzyme C-terminal domain RK21_RS05510 PF00128 Alpha amylase, catalytic domain RK21_RS05510 PF11896 Domain of unknown function (DUF3416) RK21_RS05515 PF00128 Alpha amylase, catalytic domain RK21_RS05515 PF16657 Maltogenic Amylase, C-terminal domain RK21_RS05520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RK21_RS05520 PF02806 Alpha amylase, C-terminal all-beta domain RK21_RS05520 PF00128 Alpha amylase, catalytic domain RK21_RS05530 PF03372 Endonuclease/Exonuclease/phosphatase family RK21_RS05535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RK21_RS05535 PF00128 Alpha amylase, catalytic domain RK21_RS05545 PF00128 Alpha amylase, catalytic domain RK21_RS05550 PF02446 4-alpha-glucanotransferase RK21_RS05555 PF11941 Domain of unknown function (DUF3459) RK21_RS05555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RK21_RS05555 PF00128 Alpha amylase, catalytic domain RK21_RS05560 PF00534 Glycosyl transferases group 1 RK21_RS05560 PF08323 Starch synthase catalytic domain RK21_RS05565 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RK21_RS05565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RK21_RS05570 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RK21_RS05570 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RK21_RS05575 PF00723 Glycosyl hydrolases family 15 RK21_RS05585 PF08362 YcdC-like protein, C-terminal region RK21_RS05585 PF00440 Bacterial regulatory proteins, tetR family RK21_RS05590 PF01180 Dihydroorotate dehydrogenase RK21_RS05595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RK21_RS05595 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS05600 PF01979 Amidohydrolase family RK21_RS05605 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RK21_RS05610 PF01546 Peptidase family M20/M25/M40 RK21_RS05610 PF07687 Peptidase dimerisation domain RK21_RS05615 PF12706 Beta-lactamase superfamily domain RK21_RS05620 PF08212 Lipocalin-like domain RK21_RS05630 PF06450 Bacterial Na+/H+ antiporter B (NhaB) RK21_RS05635 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS05640 PF09297 NADH pyrophosphatase zinc ribbon domain RK21_RS05640 PF00293 NUDIX domain RK21_RS05640 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain RK21_RS05645 PF01925 Sulfite exporter TauE/SafE RK21_RS05650 PF00561 alpha/beta hydrolase fold RK21_RS05660 PF01266 FAD dependent oxidoreductase RK21_RS05665 PF01131 DNA topoisomerase RK21_RS05665 PF01751 Toprim domain RK21_RS05670 PF13673 Acetyltransferase (GNAT) domain RK21_RS05675 PF08007 Cupin superfamily protein RK21_RS05680 PF00206 Lyase RK21_RS05680 PF08328 Adenylosuccinate lyase C-terminal RK21_RS05685 PF04356 Protein of unknown function (DUF489) RK21_RS05695 PF00293 NUDIX domain RK21_RS05700 PF03971 Monomeric isocitrate dehydrogenase RK21_RS05705 PF00180 Isocitrate/isopropylmalate dehydrogenase RK21_RS05710 PF00313 'Cold-shock' DNA-binding domain RK21_RS05715 PF02617 ATP-dependent Clp protease adaptor protein ClpS RK21_RS05720 PF07724 AAA domain (Cdc48 subfamily) RK21_RS05720 PF02861 Clp amino terminal domain, pathogenicity island component RK21_RS05720 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS05720 PF10431 C-terminal, D2-small domain, of ClpB protein RK21_RS05720 PF17871 AAA lid domain RK21_RS05725 PF01176 Translation initiation factor 1A / IF-1 RK21_RS05730 PF04377 Arginine-tRNA-protein transferase, C terminus RK21_RS05730 PF04376 Arginine-tRNA-protein transferase, N terminus RK21_RS05735 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RK21_RS05740 PF17854 FtsK alpha domain RK21_RS05740 PF09397 Ftsk gamma domain RK21_RS05740 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RK21_RS05740 PF01580 FtsK/SpoIIIE family RK21_RS05745 PF03548 Outer membrane lipoprotein carrier protein LolA RK21_RS05750 PF12002 MgsA AAA+ ATPase C terminal RK21_RS05750 PF16193 AAA C-terminal domain RK21_RS05750 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS05755 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RK21_RS05760 PF02403 Seryl-tRNA synthetase N-terminal domain RK21_RS05760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RK21_RS05765 PF14824 Sirohaem biosynthesis protein central RK21_RS05765 PF10414 Sirohaem synthase dimerisation region RK21_RS05765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS05770 PF13409 Glutathione S-transferase, N-terminal domain RK21_RS05775 PF02885 Glycosyl transferase family, helical bundle domain RK21_RS05775 PF00591 Glycosyl transferase family, a/b domain RK21_RS05780 PF04358 DsrC like protein RK21_RS05790 PF02635 DsrE/DsrF-like family RK21_RS05795 PF02635 DsrE/DsrF-like family RK21_RS05800 PF00860 Permease family RK21_RS05805 PF01027 Inhibitor of apoptosis-promoting Bax1 RK21_RS05845 PF01227 GTP cyclohydrolase I RK21_RS05855 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS05855 PF00107 Zinc-binding dehydrogenase RK21_RS05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS05860 PF03466 LysR substrate binding domain RK21_RS05880 PF00106 short chain dehydrogenase RK21_RS05890 PF07044 Protein of unknown function (DUF1329) RK21_RS05895 PF14870 Photosynthesis system II assembly factor YCF48 RK21_RS05910 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS05925 PF00440 Bacterial regulatory proteins, tetR family RK21_RS05925 PF17938 Tetracyclin repressor-like, C-terminal domain RK21_RS05930 PF00067 Cytochrome P450 RK21_RS05955 PF00106 short chain dehydrogenase RK21_RS05960 PF14759 Reductase C-terminal RK21_RS05960 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS05965 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS05970 PF07690 Major Facilitator Superfamily RK21_RS05990 PF01557 Fumarylacetoacetate (FAA) hydrolase family RK21_RS06020 PF01557 Fumarylacetoacetate (FAA) hydrolase family RK21_RS06025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RK21_RS06025 PF00355 Rieske [2Fe-2S] domain RK21_RS06030 PF00866 Ring hydroxylating beta subunit RK21_RS06045 PF00501 AMP-binding enzyme RK21_RS06045 PF13193 AMP-binding enzyme C-terminal domain RK21_RS06060 PF01557 Fumarylacetoacetate (FAA) hydrolase family RK21_RS06065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS06065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS06070 PF00108 Thiolase, N-terminal domain RK21_RS06070 PF02803 Thiolase, C-terminal domain RK21_RS06080 PF00067 Cytochrome P450 RK21_RS06090 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS06090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS06090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS06095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS06095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS06095 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS06100 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS06105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS06105 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS06105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS06115 PF07690 Major Facilitator Superfamily RK21_RS06120 PF00255 Glutathione peroxidase RK21_RS06125 PF02569 Pantoate-beta-alanine ligase RK21_RS06130 PF00440 Bacterial regulatory proteins, tetR family RK21_RS06150 PF04002 RadC-like JAB domain RK21_RS06210 PF00857 Isochorismatase family RK21_RS06220 PF01925 Sulfite exporter TauE/SafE RK21_RS06225 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS06230 PF02080 TrkA-C domain RK21_RS06230 PF03600 Citrate transporter RK21_RS06260 PF08241 Methyltransferase domain RK21_RS06285 PF01343 Peptidase family S49 RK21_RS06285 PF08496 Peptidase family S49 N-terminal RK21_RS06335 PF02627 Carboxymuconolactone decarboxylase family RK21_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS06345 PF03466 LysR substrate binding domain RK21_RS06360 PF00107 Zinc-binding dehydrogenase RK21_RS06360 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS06370 PF07681 DoxX RK21_RS06385 PF13426 PAS domain RK21_RS06385 PF00072 Response regulator receiver domain RK21_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06390 PF06745 KaiC RK21_RS06395 PF00486 Transcriptional regulatory protein, C terminal RK21_RS06395 PF00072 Response regulator receiver domain RK21_RS06400 PF02599 Global regulator protein family RK21_RS06410 PF00005 ABC transporter RK21_RS06410 PF03459 TOBE domain RK21_RS06415 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS06425 PF03060 Nitronate monooxygenase RK21_RS06440 PF00034 Cytochrome c RK21_RS06445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS06450 PF00483 Nucleotidyl transferase RK21_RS06455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK21_RS06455 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS06465 PF10417 C-terminal domain of 1-Cys peroxiredoxin RK21_RS06465 PF00578 AhpC/TSA family RK21_RS06470 PF13192 Thioredoxin domain RK21_RS06470 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS06480 PF04337 Protein of unknown function, DUF480 RK21_RS06485 PF00375 Sodium:dicarboxylate symporter family RK21_RS06495 PF02627 Carboxymuconolactone decarboxylase family RK21_RS06515 PF06719 AraC-type transcriptional regulator N-terminus RK21_RS06515 PF12833 Helix-turn-helix domain RK21_RS06520 PF00107 Zinc-binding dehydrogenase RK21_RS06520 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS06530 PF07690 Major Facilitator Superfamily RK21_RS06540 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RK21_RS06540 PF12833 Helix-turn-helix domain RK21_RS06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS06545 PF03466 LysR substrate binding domain RK21_RS06550 PF00881 Nitroreductase family RK21_RS06555 PF09722 Protein of unknown function (DUF2384) RK21_RS06560 PF08808 RES domain RK21_RS06565 PF00266 Aminotransferase class-V RK21_RS06570 PF03466 LysR substrate binding domain RK21_RS06570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS06575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS06575 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS06575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS06580 PF03741 Integral membrane protein TerC family RK21_RS06585 PF00691 OmpA family RK21_RS06590 PF00005 ABC transporter RK21_RS06590 PF08402 TOBE domain RK21_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS06610 PF00925 GTP cyclohydrolase II RK21_RS06610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RK21_RS06620 PF02678 Pirin RK21_RS06620 PF17954 Quercetinase C-terminal cupin domain RK21_RS06625 PF07859 alpha/beta hydrolase fold RK21_RS06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS06630 PF03466 LysR substrate binding domain RK21_RS06640 PF01571 Aminomethyltransferase folate-binding domain RK21_RS06640 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS06640 PF17806 Sarcosine oxidase A3 domain RK21_RS06640 PF08669 Glycine cleavage T-protein C-terminal barrel domain RK21_RS06645 PF04267 Sarcosine oxidase, delta subunit family RK21_RS06650 PF01266 FAD dependent oxidoreductase RK21_RS06655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RK21_RS06655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RK21_RS06660 PF00551 Formyl transferase RK21_RS06670 PF03621 MbtH-like protein RK21_RS06675 PF00975 Thioesterase domain RK21_RS06685 PF07759 Protein of unknown function (DUF1615) RK21_RS06695 PF00950 ABC 3 transport family RK21_RS06700 PF00005 ABC transporter RK21_RS06730 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RK21_RS06740 PF00768 D-alanyl-D-alanine carboxypeptidase RK21_RS06745 PF00989 PAS fold RK21_RS06745 PF00672 HAMP domain RK21_RS06745 PF18698 Histidine kinase sensor domain RK21_RS06745 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06785 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS06795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS06805 PF03573 outer membrane porin, OprD family RK21_RS06810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06815 PF00072 Response regulator receiver domain RK21_RS06815 PF08448 PAS fold RK21_RS06815 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06815 PF13188 PAS domain RK21_RS06820 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06820 PF00072 Response regulator receiver domain RK21_RS06820 PF09308 LuxQ, periplasmic RK21_RS06825 PF03705 CheR methyltransferase, all-alpha domain RK21_RS06825 PF01739 CheR methyltransferase, SAM binding domain RK21_RS06830 PF01339 CheB methylesterase RK21_RS06835 PF00672 HAMP domain RK21_RS06835 PF01627 Hpt domain RK21_RS06835 PF00072 Response regulator receiver domain RK21_RS06835 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS06840 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06840 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS06840 PF00072 Response regulator receiver domain RK21_RS06850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS06850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS06855 PF00108 Thiolase, N-terminal domain RK21_RS06855 PF02803 Thiolase, C-terminal domain RK21_RS06865 PF02627 Carboxymuconolactone decarboxylase family RK21_RS06870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RK21_RS06875 PF07690 Major Facilitator Superfamily RK21_RS06880 PF00392 Bacterial regulatory proteins, gntR family RK21_RS06880 PF00155 Aminotransferase class I and II RK21_RS06890 PF01274 Malate synthase RK21_RS06895 PF03928 Haem-degrading RK21_RS06900 PF13183 4Fe-4S dicluster domain RK21_RS06900 PF02754 Cysteine-rich domain RK21_RS06905 PF01565 FAD binding domain RK21_RS06910 PF01565 FAD binding domain RK21_RS06910 PF02913 FAD linked oxidases, C-terminal domain RK21_RS06915 PF00392 Bacterial regulatory proteins, gntR family RK21_RS06915 PF07729 FCD domain RK21_RS06945 PF03717 Penicillin-binding Protein dimerisation domain RK21_RS06945 PF00905 Penicillin binding protein transpeptidase domain RK21_RS06955 PF00005 ABC transporter RK21_RS06960 PF12704 MacB-like periplasmic core domain RK21_RS06960 PF02687 FtsX-like permease family RK21_RS06970 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS06975 PF00440 Bacterial regulatory proteins, tetR family RK21_RS06975 PF13977 BetI-type transcriptional repressor, C-terminal RK21_RS06980 PF00486 Transcriptional regulatory protein, C terminal RK21_RS06980 PF00072 Response regulator receiver domain RK21_RS06990 PF00672 HAMP domain RK21_RS06990 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS06990 PF01627 Hpt domain RK21_RS06990 PF17149 Periplasmic sensor domain found in signal transduction proteins RK21_RS06990 PF00072 Response regulator receiver domain RK21_RS06995 PF00324 Amino acid permease RK21_RS07000 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS07005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS07005 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS07005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS07010 PF08442 ATP-grasp domain RK21_RS07010 PF00549 CoA-ligase RK21_RS07015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS07015 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS07015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS07020 PF01168 Alanine racemase, N-terminal domain RK21_RS07020 PF00842 Alanine racemase, C-terminal domain RK21_RS07025 PF00155 Aminotransferase class I and II RK21_RS07030 PF00171 Aldehyde dehydrogenase family RK21_RS07035 PF02525 Flavodoxin-like fold RK21_RS07040 PF13416 Bacterial extracellular solute-binding protein RK21_RS07045 PF00202 Aminotransferase class-III RK21_RS07050 PF00196 Bacterial regulatory proteins, luxR family RK21_RS07050 PF00072 Response regulator receiver domain RK21_RS07055 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07060 PF03466 LysR substrate binding domain RK21_RS07065 PF13378 Enolase C-terminal domain-like RK21_RS07065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RK21_RS07070 PF02426 Muconolactone delta-isomerase RK21_RS07075 PF00775 Dioxygenase RK21_RS07075 PF04444 Catechol dioxygenase N terminus RK21_RS07085 PF08447 PAS fold RK21_RS07085 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS07085 PF00563 EAL domain RK21_RS07085 PF08448 PAS fold RK21_RS07090 PF00248 Aldo/keto reductase family RK21_RS07105 PF03466 LysR substrate binding domain RK21_RS07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07110 PF00141 Peroxidase RK21_RS07115 PF13091 PLD-like domain RK21_RS07130 PF00563 EAL domain RK21_RS07130 PF13188 PAS domain RK21_RS07130 PF03707 Bacterial signalling protein N terminal repeat RK21_RS07130 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS07135 PF11892 Domain of unknown function (DUF3412) RK21_RS07135 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases RK21_RS07135 PF03641 Possible lysine decarboxylase RK21_RS07140 PF03601 Conserved hypothetical protein 698 RK21_RS07145 PF03466 LysR substrate binding domain RK21_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07150 PF02911 Formyl transferase, C-terminal domain RK21_RS07150 PF00551 Formyl transferase RK21_RS07160 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RK21_RS07160 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RK21_RS07180 PF00120 Glutamine synthetase, catalytic domain RK21_RS07190 PF01493 GXGXG motif RK21_RS07195 PF01645 Conserved region in glutamate synthase RK21_RS07200 PF00909 Ammonium Transporter Family RK21_RS07205 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RK21_RS07210 PF01037 Lrp/AsnC ligand binding domain RK21_RS07220 PF01810 LysE type translocator RK21_RS07225 PF00072 Response regulator receiver domain RK21_RS07225 PF13426 PAS domain RK21_RS07225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS07230 PF09297 NADH pyrophosphatase zinc ribbon domain RK21_RS07230 PF00293 NUDIX domain RK21_RS07235 PF00392 Bacterial regulatory proteins, gntR family RK21_RS07235 PF07729 FCD domain RK21_RS07240 PF02627 Carboxymuconolactone decarboxylase family RK21_RS07245 PF01613 Flavin reductase like domain RK21_RS07250 PF00171 Aldehyde dehydrogenase family RK21_RS07255 PF12697 Alpha/beta hydrolase family RK21_RS07265 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS07270 PF00296 Luciferase-like monooxygenase RK21_RS07275 PF01613 Flavin reductase like domain RK21_RS07280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RK21_RS07290 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS07295 PF02082 Transcriptional regulator RK21_RS07300 PF12833 Helix-turn-helix domain RK21_RS07300 PF12852 Cupin RK21_RS07315 PF00005 ABC transporter RK21_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS07335 PF01118 Semialdehyde dehydrogenase, NAD binding domain RK21_RS07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07340 PF03466 LysR substrate binding domain RK21_RS07345 PF01361 Tautomerase enzyme RK21_RS07355 PF03466 LysR substrate binding domain RK21_RS07355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07365 PF08239 Bacterial SH3 domain RK21_RS07375 PF02028 BCCT, betaine/carnitine/choline family transporter RK21_RS07405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS07405 PF00034 Cytochrome c RK21_RS07410 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RK21_RS07415 PF01799 [2Fe-2S] binding domain RK21_RS07415 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS07420 PF18381 YcaO cyclodehydratase C-terminal domain RK21_RS07420 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RK21_RS07425 PF13649 Methyltransferase domain RK21_RS07435 PF07715 TonB-dependent Receptor Plug Domain RK21_RS07435 PF00593 TonB dependent receptor RK21_RS07450 PF03466 LysR substrate binding domain RK21_RS07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07455 PF00107 Zinc-binding dehydrogenase RK21_RS07455 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS07475 PF00392 Bacterial regulatory proteins, gntR family RK21_RS07475 PF07729 FCD domain RK21_RS07480 PF00171 Aldehyde dehydrogenase family RK21_RS07485 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RK21_RS07485 PF08666 SAF domain RK21_RS07490 PF07690 Major Facilitator Superfamily RK21_RS07495 PF00701 Dihydrodipicolinate synthetase family RK21_RS07500 PF07722 Peptidase C26 RK21_RS07505 PF00005 ABC transporter RK21_RS07510 PF01266 FAD dependent oxidoreductase RK21_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS07525 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS07535 PF02615 Malate/L-lactate dehydrogenase RK21_RS07540 PF00155 Aminotransferase class I and II RK21_RS07550 PF08534 Redoxin RK21_RS07555 PF13533 Biotin-lipoyl like RK21_RS07560 PF00873 AcrB/AcrD/AcrF family RK21_RS07565 PF00873 AcrB/AcrD/AcrF family RK21_RS07570 PF02321 Outer membrane efflux protein RK21_RS07575 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS07575 PF03707 Bacterial signalling protein N terminal repeat RK21_RS07575 PF00563 EAL domain RK21_RS07600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RK21_RS07600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RK21_RS07600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RK21_RS07600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RK21_RS07605 PF04542 Sigma-70 region 2 RK21_RS07605 PF08281 Sigma-70, region 4 RK21_RS07610 PF16220 Domain of unknown function (DUF4880) RK21_RS07610 PF04773 FecR protein RK21_RS07615 PF07715 TonB-dependent Receptor Plug Domain RK21_RS07615 PF00593 TonB dependent receptor RK21_RS07620 PF01042 Endoribonuclease L-PSP RK21_RS07635 PF01546 Peptidase family M20/M25/M40 RK21_RS07635 PF07687 Peptidase dimerisation domain RK21_RS07640 PF04966 Carbohydrate-selective porin, OprB family RK21_RS07645 PF01011 PQQ enzyme repeat RK21_RS07655 PF03466 LysR substrate binding domain RK21_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07660 PF07690 Major Facilitator Superfamily RK21_RS07665 PF01810 LysE type translocator RK21_RS07670 PF01965 DJ-1/PfpI family RK21_RS07670 PF12833 Helix-turn-helix domain RK21_RS07690 PF03466 LysR substrate binding domain RK21_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS07705 PF00672 HAMP domain RK21_RS07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS07710 PF13726 Na+-H+ antiporter family RK21_RS07710 PF03553 Na+/H+ antiporter family RK21_RS07720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS07720 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS07720 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS07720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS07725 PF00501 AMP-binding enzyme RK21_RS07725 PF13193 AMP-binding enzyme C-terminal domain RK21_RS07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS07730 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS07730 PF00989 PAS fold RK21_RS07735 PF00072 Response regulator receiver domain RK21_RS07735 PF00196 Bacterial regulatory proteins, luxR family RK21_RS07745 PF01047 MarR family RK21_RS07750 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS07750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS07755 PF07690 Major Facilitator Superfamily RK21_RS07760 PF03116 NQR2, RnfD, RnfE family RK21_RS07765 PF13375 RnfC Barrel sandwich hybrid domain RK21_RS07765 PF13237 4Fe-4S dicluster domain RK21_RS07765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RK21_RS07765 PF10531 SLBB domain RK21_RS07770 PF02424 ApbE family RK21_RS07780 PF00072 Response regulator receiver domain RK21_RS07780 PF13426 PAS domain RK21_RS07780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS07785 PF13188 PAS domain RK21_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS07785 PF08448 PAS fold RK21_RS07785 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS07785 PF00072 Response regulator receiver domain RK21_RS07790 PF00155 Aminotransferase class I and II RK21_RS07790 PF00392 Bacterial regulatory proteins, gntR family RK21_RS07795 PF13746 4Fe-4S dicluster domain RK21_RS07795 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase RK21_RS07795 PF12801 4Fe-4S binding domain RK21_RS07805 PF02308 MgtC family RK21_RS07810 PF00682 HMGL-like RK21_RS07815 PF13411 MerR HTH family regulatory protein RK21_RS07825 PF12833 Helix-turn-helix domain RK21_RS07825 PF02311 AraC-like ligand binding domain RK21_RS07830 PF01494 FAD binding domain RK21_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS07845 PF03466 LysR substrate binding domain RK21_RS07850 PF01852 START domain RK21_RS07855 PF07883 Cupin domain RK21_RS07855 PF05899 Protein of unknown function (DUF861) RK21_RS07865 PF09084 NMT1/THI5 like RK21_RS07870 PF17938 Tetracyclin repressor-like, C-terminal domain RK21_RS07870 PF00440 Bacterial regulatory proteins, tetR family RK21_RS07875 PF03372 Endonuclease/Exonuclease/phosphatase family RK21_RS07885 PF17243 POTRA domain TamA domain 1 RK21_RS07885 PF01103 Surface antigen RK21_RS07885 PF07244 Surface antigen variable number repeat RK21_RS07890 PF04357 TamB, inner membrane protein subunit of TAM complex RK21_RS07925 PF01804 Penicillin amidase RK21_RS07930 PF00149 Calcineurin-like phosphoesterase RK21_RS07935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RK21_RS07940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain RK21_RS07940 PF00749 tRNA synthetases class I (E and Q), catalytic domain RK21_RS07945 PF09190 DALR domain RK21_RS07945 PF01406 tRNA synthetases class I (C) catalytic domain RK21_RS07950 PF00672 HAMP domain RK21_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS07950 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS07955 PF00072 Response regulator receiver domain RK21_RS07955 PF00486 Transcriptional regulatory protein, C terminal RK21_RS07960 PF00392 Bacterial regulatory proteins, gntR family RK21_RS07960 PF07729 FCD domain RK21_RS07965 PF08943 CsiD RK21_RS07970 PF01266 FAD dependent oxidoreductase RK21_RS07975 PF00324 Amino acid permease RK21_RS07985 PF00490 Delta-aminolevulinic acid dehydratase RK21_RS07990 PF00083 Sugar (and other) transporter RK21_RS07990 PF08946 Osmosensory transporter coiled coil RK21_RS07995 PF06912 Protein of unknown function (DUF1275) RK21_RS08000 PF00677 Lumazine binding domain RK21_RS08020 PF06039 Malate:quinone oxidoreductase (Mqo) RK21_RS08025 PF01370 NAD dependent epimerase/dehydratase family RK21_RS08030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RK21_RS08030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RK21_RS08030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RK21_RS08035 PF03466 LysR substrate binding domain RK21_RS08035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS08045 PF03435 Saccharopine dehydrogenase NADP binding domain RK21_RS08045 PF16653 Saccharopine dehydrogenase C-terminal domain RK21_RS08050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RK21_RS08055 PF00585 C-terminal regulatory domain of Threonine dehydratase RK21_RS08055 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS08065 PF01425 Amidase RK21_RS08070 PF01136 Peptidase family U32 RK21_RS08070 PF12392 Collagenase RK21_RS08080 PF04816 tRNA (adenine(22)-N(1))-methyltransferase RK21_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS08090 PF03466 LysR substrate binding domain RK21_RS08100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS08100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS08100 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS08110 PF16957 Malonate decarboxylase, alpha subunit, transporter RK21_RS08115 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase RK21_RS08120 PF06857 Malonate decarboxylase delta subunit (MdcD) RK21_RS08125 PF01039 Carboxyl transferase domain RK21_RS08135 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG RK21_RS08140 PF00698 Acyl transferase domain RK21_RS08190 PF00158 Sigma-54 interaction domain RK21_RS08190 PF02954 Bacterial regulatory protein, Fis family RK21_RS08190 PF00072 Response regulator receiver domain RK21_RS08195 PF00437 Type II/IV secretion system protein RK21_RS08220 PF00263 Bacterial type II and III secretion system protein RK21_RS08220 PF03958 Bacterial type II/III secretion system short domain RK21_RS08225 PF07963 Prokaryotic N-terminal methylation motif RK21_RS08225 PF08334 Type II secretion system (T2SS), protein G RK21_RS08230 PF08334 Type II secretion system (T2SS), protein G RK21_RS08230 PF07963 Prokaryotic N-terminal methylation motif RK21_RS08245 PF10614 Type VIII secretion system (T8SS), CsgF protein RK21_RS08250 PF03783 Curli production assembly/transport component CsgG RK21_RS08265 PF00158 Sigma-54 interaction domain RK21_RS08265 PF01590 GAF domain RK21_RS08265 PF02954 Bacterial regulatory protein, Fis family RK21_RS08270 PF00664 ABC transporter transmembrane region RK21_RS08270 PF00005 ABC transporter RK21_RS08290 PF00171 Aldehyde dehydrogenase family RK21_RS08305 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit RK21_RS08315 PF13193 AMP-binding enzyme C-terminal domain RK21_RS08315 PF00501 AMP-binding enzyme RK21_RS08320 PF12804 MobA-like NTP transferase domain RK21_RS08325 PF00873 AcrB/AcrD/AcrF family RK21_RS08330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS08330 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS08335 PF00072 Response regulator receiver domain RK21_RS08335 PF00486 Transcriptional regulatory protein, C terminal RK21_RS08340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS08340 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS08340 PF00672 HAMP domain RK21_RS08345 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS08345 PF00563 EAL domain RK21_RS08350 PF14488 Domain of unknown function (DUF4434) RK21_RS08360 PF13632 Glycosyl transferase family group 2 RK21_RS08360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RK21_RS08370 PF00585 C-terminal regulatory domain of Threonine dehydratase RK21_RS08370 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS08380 PF18029 Glyoxalase-like domain RK21_RS08385 PF00171 Aldehyde dehydrogenase family RK21_RS08410 PF01810 LysE type translocator RK21_RS08415 PF03741 Integral membrane protein TerC family RK21_RS08415 PF00571 CBS domain RK21_RS08415 PF03471 Transporter associated domain RK21_RS08425 PF12792 CSS motif domain associated with EAL RK21_RS08425 PF00563 EAL domain RK21_RS08430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS08445 PF13426 PAS domain RK21_RS08445 PF00072 Response regulator receiver domain RK21_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS08450 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS08450 PF13188 PAS domain RK21_RS08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS08450 PF00072 Response regulator receiver domain RK21_RS08450 PF08448 PAS fold RK21_RS08460 PF02321 Outer membrane efflux protein RK21_RS08465 PF00873 AcrB/AcrD/AcrF family RK21_RS08470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS08470 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS08475 PF00482 Type II secretion system (T2SS), protein F RK21_RS08480 PF08334 Type II secretion system (T2SS), protein G RK21_RS08480 PF07963 Prokaryotic N-terminal methylation motif RK21_RS08485 PF01551 Peptidase family M23 RK21_RS08485 PF10145 Phage-related minor tail protein RK21_RS08485 PF01464 Transglycosylase SLT domain RK21_RS08490 PF13188 PAS domain RK21_RS08490 PF00989 PAS fold RK21_RS08490 PF13426 PAS domain RK21_RS08490 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS08500 PF00158 Sigma-54 interaction domain RK21_RS08500 PF00072 Response regulator receiver domain RK21_RS08500 PF02954 Bacterial regulatory protein, Fis family RK21_RS08510 PF02447 GntP family permease RK21_RS08520 PF00356 Bacterial regulatory proteins, lacI family RK21_RS08525 PF08447 PAS fold RK21_RS08525 PF13426 PAS domain RK21_RS08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS08530 PF00072 Response regulator receiver domain RK21_RS08530 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS08530 PF01627 Hpt domain RK21_RS08530 PF00989 PAS fold RK21_RS08530 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS08535 PF00072 Response regulator receiver domain RK21_RS08535 PF00196 Bacterial regulatory proteins, luxR family RK21_RS08540 PF06906 Protein of unknown function (DUF1272) RK21_RS08545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS08570 PF01810 LysE type translocator RK21_RS08585 PF02678 Pirin RK21_RS08585 PF05726 Pirin C-terminal cupin domain RK21_RS08600 PF04893 Yip1 domain RK21_RS08610 PF13532 2OG-Fe(II) oxygenase superfamily RK21_RS08635 PF13618 Gluconate 2-dehydrogenase subunit 3 RK21_RS08640 PF05199 GMC oxidoreductase RK21_RS08640 PF00732 GMC oxidoreductase RK21_RS08645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS08645 PF00034 Cytochrome c RK21_RS08650 PF00356 Bacterial regulatory proteins, lacI family RK21_RS08660 PF00294 pfkB family carbohydrate kinase RK21_RS08665 PF07690 Major Facilitator Superfamily RK21_RS08670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS08670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS08675 PF07690 Major Facilitator Superfamily RK21_RS08690 PF17755 UvrA DNA-binding domain RK21_RS08705 PF06744 Type VI secretion protein IcmF C-terminal RK21_RS08705 PF14331 ImcF-related N-terminal domain RK21_RS08705 PF06761 Intracellular multiplication and human macrophage-killing RK21_RS08715 PF06744 Type VI secretion protein IcmF C-terminal RK21_RS08715 PF14331 ImcF-related N-terminal domain RK21_RS08715 PF06761 Intracellular multiplication and human macrophage-killing RK21_RS08725 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE RK21_RS08735 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS08735 PF17871 AAA lid domain RK21_RS08735 PF10431 C-terminal, D2-small domain, of ClpB protein RK21_RS08735 PF07724 AAA domain (Cdc48 subfamily) RK21_RS08745 PF05947 Type VI secretion system, TssF RK21_RS08755 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath RK21_RS08785 PF18660 Tsi6 RK21_RS08790 PF18660 Tsi6 RK21_RS08795 PF01129 NAD:arginine ADP-ribosyltransferase RK21_RS08800 PF04717 Type VI secretion system, phage-baseplate injector RK21_RS08800 PF06715 Gp5 C-terminal repeat (3 copies) RK21_RS08835 PF05593 RHS Repeat RK21_RS08835 PF03527 RHS protein RK21_RS08860 PF07687 Peptidase dimerisation domain RK21_RS08860 PF01546 Peptidase family M20/M25/M40 RK21_RS08865 PF07690 Major Facilitator Superfamily RK21_RS08870 PF01425 Amidase RK21_RS08875 PF01614 Bacterial transcriptional regulator RK21_RS08875 PF09339 IclR helix-turn-helix domain RK21_RS08880 PF03466 LysR substrate binding domain RK21_RS08880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS08885 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS08890 PF03466 LysR substrate binding domain RK21_RS08895 PF01810 LysE type translocator RK21_RS08900 PF00717 Peptidase S24-like RK21_RS08900 PF01726 LexA DNA binding domain RK21_RS08915 PF02811 PHP domain RK21_RS08915 PF14579 Helix-hairpin-helix motif RK21_RS08915 PF01336 OB-fold nucleic acid binding domain RK21_RS08915 PF07733 Bacterial DNA polymerase III alpha NTPase domain RK21_RS08915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RK21_RS08920 PF00248 Aldo/keto reductase family RK21_RS08925 PF03466 LysR substrate binding domain RK21_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS08930 PF01144 Coenzyme A transferase RK21_RS08935 PF01144 Coenzyme A transferase RK21_RS08940 PF02667 Short chain fatty acid transporter RK21_RS08945 PF01381 Helix-turn-helix RK21_RS08945 PF08671 Anti-repressor SinI RK21_RS08970 PF16363 GDP-mannose 4,6 dehydratase RK21_RS08990 PF05199 GMC oxidoreductase RK21_RS08990 PF00732 GMC oxidoreductase RK21_RS08995 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS08995 PF14602 Hexapeptide repeat of succinyl-transferase RK21_RS08995 PF12464 Maltose acetyltransferase RK21_RS09005 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS09010 PF00535 Glycosyl transferase family 2 RK21_RS09015 PF04393 Protein of unknown function (DUF535) RK21_RS09020 PF13439 Glycosyltransferase Family 4 RK21_RS09020 PF00534 Glycosyl transferases group 1 RK21_RS09035 PF02397 Bacterial sugar transferase RK21_RS09040 PF03466 LysR substrate binding domain RK21_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS09045 PF03313 Serine dehydratase alpha chain RK21_RS09045 PF03315 Serine dehydratase beta chain RK21_RS09055 PF01266 FAD dependent oxidoreductase RK21_RS09060 PF13416 Bacterial extracellular solute-binding protein RK21_RS09065 PF00120 Glutamine synthetase, catalytic domain RK21_RS09080 PF00171 Aldehyde dehydrogenase family RK21_RS09085 PF03466 LysR substrate binding domain RK21_RS09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS09100 PF09411 Lipid A 3-O-deacylase (PagL) RK21_RS09105 PF00593 TonB dependent receptor RK21_RS09105 PF07715 TonB-dependent Receptor Plug Domain RK21_RS09115 PF00459 Inositol monophosphatase family RK21_RS09125 PF12833 Helix-turn-helix domain RK21_RS09125 PF14525 AraC-binding-like domain RK21_RS09135 PF00355 Rieske [2Fe-2S] domain RK21_RS09135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RK21_RS09140 PF00866 Ring hydroxylating beta subunit RK21_RS09145 PF00970 Oxidoreductase FAD-binding domain RK21_RS09145 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS09145 PF00175 Oxidoreductase NAD-binding domain RK21_RS09150 PF00106 short chain dehydrogenase RK21_RS09155 PF07690 Major Facilitator Superfamily RK21_RS09160 PF04444 Catechol dioxygenase N terminus RK21_RS09160 PF00775 Dioxygenase RK21_RS09165 PF03594 Benzoate membrane transport protein RK21_RS09170 PF03573 outer membrane porin, OprD family RK21_RS09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS09185 PF03466 LysR substrate binding domain RK21_RS09190 PF00296 Luciferase-like monooxygenase RK21_RS09195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS09205 PF00248 Aldo/keto reductase family RK21_RS09210 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS09210 PF14759 Reductase C-terminal RK21_RS09215 PF07690 Major Facilitator Superfamily RK21_RS09220 PF13556 PucR C-terminal helix-turn-helix domain RK21_RS09220 PF05651 Putative sugar diacid recognition RK21_RS09220 PF17853 GGDEF-like domain RK21_RS09225 PF02595 Glycerate kinase family RK21_RS09240 PF00563 EAL domain RK21_RS09240 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS09240 PF03707 Bacterial signalling protein N terminal repeat RK21_RS09245 PF02630 SCO1/SenC RK21_RS09260 PF03070 TENA/THI-4/PQQC family RK21_RS09265 PF07969 Amidohydrolase family RK21_RS09285 PF00563 EAL domain RK21_RS09285 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS09285 PF00360 Phytochrome region RK21_RS09285 PF01590 GAF domain RK21_RS09290 PF00583 Acetyltransferase (GNAT) family RK21_RS09295 PF02308 MgtC family RK21_RS09300 PF04116 Fatty acid hydroxylase superfamily RK21_RS09305 PF01758 Sodium Bile acid symporter family RK21_RS09310 PF04261 Dyp-type peroxidase family RK21_RS09315 PF00248 Aldo/keto reductase family RK21_RS09340 PF05175 Methyltransferase small domain RK21_RS09340 PF17827 PrmC N-terminal domain RK21_RS09345 PF04107 Glutamate-cysteine ligase family 2(GCS2) RK21_RS09360 PF02735 Ku70/Ku80 beta-barrel domain RK21_RS09380 PF02585 GlcNAc-PI de-N-acetylase RK21_RS09390 PF13298 DNA polymerase Ligase (LigD) RK21_RS09390 PF04679 ATP dependent DNA ligase C terminal region RK21_RS09390 PF01068 ATP dependent DNA ligase domain RK21_RS09410 PF03706 Lysylphosphatidylglycerol synthase TM region RK21_RS09415 PF13091 PLD-like domain RK21_RS09420 PF03372 Endonuclease/Exonuclease/phosphatase family RK21_RS09440 PF00293 NUDIX domain RK21_RS09445 PF08448 PAS fold RK21_RS09445 PF03705 CheR methyltransferase, all-alpha domain RK21_RS09445 PF01739 CheR methyltransferase, SAM binding domain RK21_RS09445 PF01339 CheB methylesterase RK21_RS09460 PF00171 Aldehyde dehydrogenase family RK21_RS09460 PF01575 MaoC like domain RK21_RS09465 PF03573 outer membrane porin, OprD family RK21_RS09470 PF00474 Sodium:solute symporter family RK21_RS09475 PF04341 Protein of unknown function, DUF485 RK21_RS09480 PF00970 Oxidoreductase FAD-binding domain RK21_RS09480 PF00175 Oxidoreductase NAD-binding domain RK21_RS09480 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS09485 PF01883 Iron-sulfur cluster assembly protein RK21_RS09490 PF05138 Phenylacetic acid catabolic protein RK21_RS09495 PF06243 Phenylacetic acid degradation B RK21_RS09500 PF05138 Phenylacetic acid catabolic protein RK21_RS09505 PF00501 AMP-binding enzyme RK21_RS09505 PF14535 AMP-binding enzyme C-terminal domain RK21_RS09510 PF02803 Thiolase, C-terminal domain RK21_RS09510 PF00108 Thiolase, N-terminal domain RK21_RS09515 PF03061 Thioesterase superfamily RK21_RS09520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS09520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS09520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RK21_RS09525 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS09530 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS09535 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS09540 PF08223 PaaX-like protein C-terminal domain RK21_RS09540 PF07848 PaaX-like protein RK21_RS09625 PF13276 HTH-like domain RK21_RS09625 PF00665 Integrase core domain RK21_RS09625 PF13333 Integrase core domain RK21_RS09630 PF01527 Transposase RK21_RS09635 PF07690 Major Facilitator Superfamily RK21_RS09640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS09640 PF03466 LysR substrate binding domain RK21_RS09645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS09650 PF01266 FAD dependent oxidoreductase RK21_RS09655 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS09655 PF17806 Sarcosine oxidase A3 domain RK21_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS09665 PF12911 N-terminal TM domain of oligopeptide transport permease C RK21_RS09670 PF00005 ABC transporter RK21_RS09670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RK21_RS09705 PF01740 STAS domain RK21_RS09705 PF00916 Sulfate permease family RK21_RS09710 PF00582 Universal stress protein family RK21_RS09720 PF13005 zinc-finger binding domain of transposase IS66 RK21_RS09720 PF13007 Transposase C of IS166 homeodomain RK21_RS09720 PF13817 IS66 C-terminal element RK21_RS09720 PF03050 Transposase IS66 family RK21_RS09755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RK21_RS09755 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS09775 PF04239 Protein of unknown function (DUF421) RK21_RS09785 PF02464 Competence-damaged protein RK21_RS09785 PF00994 Probable molybdopterin binding domain RK21_RS09845 PF00106 short chain dehydrogenase RK21_RS09855 PF00107 Zinc-binding dehydrogenase RK21_RS09855 PF13823 Alcohol dehydrogenase GroES-associated RK21_RS09855 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS09860 PF04679 ATP dependent DNA ligase C terminal region RK21_RS09860 PF01068 ATP dependent DNA ligase domain RK21_RS09860 PF13298 DNA polymerase Ligase (LigD) RK21_RS09870 PF05974 Domain of unknown function (DUF892) RK21_RS09875 PF05067 Manganese containing catalase RK21_RS09885 PF05974 Domain of unknown function (DUF892) RK21_RS09915 PF04239 Protein of unknown function (DUF421) RK21_RS10010 PF01527 Transposase RK21_RS10015 PF13276 HTH-like domain RK21_RS10015 PF00665 Integrase core domain RK21_RS10015 PF13333 Integrase core domain RK21_RS10050 PF02810 SEC-C motif RK21_RS10055 PF13276 HTH-like domain RK21_RS10055 PF13333 Integrase core domain RK21_RS10055 PF00665 Integrase core domain RK21_RS10060 PF01527 Transposase RK21_RS10065 PF00472 RF-1 domain RK21_RS10095 PF01037 Lrp/AsnC ligand binding domain RK21_RS10095 PF13404 AsnC-type helix-turn-helix domain RK21_RS10125 PF01965 DJ-1/PfpI family RK21_RS10125 PF12833 Helix-turn-helix domain RK21_RS10135 PF00106 short chain dehydrogenase RK21_RS10140 PF00107 Zinc-binding dehydrogenase RK21_RS10140 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS10145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS10145 PF03466 LysR substrate binding domain RK21_RS10195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS10195 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS10195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS10210 PF03466 LysR substrate binding domain RK21_RS10215 PF00106 short chain dehydrogenase RK21_RS10220 PF08534 Redoxin RK21_RS10230 PF04143 Sulphur transport RK21_RS10240 PF02223 Thymidylate kinase RK21_RS10245 PF00196 Bacterial regulatory proteins, luxR family RK21_RS10245 PF00072 Response regulator receiver domain RK21_RS10250 PF00795 Carbon-nitrogen hydrolase RK21_RS10255 PF00324 Amino acid permease RK21_RS10260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS10260 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS10260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS10265 PF03466 LysR substrate binding domain RK21_RS10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS10270 PF07690 Major Facilitator Superfamily RK21_RS10275 PF04231 Endonuclease I RK21_RS10285 PF01161 Phosphatidylethanolamine-binding protein RK21_RS10290 PF00793 DAHP synthetase I family RK21_RS10295 PF05698 Bacterial trigger factor protein (TF) C-terminus RK21_RS10300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS10305 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS10310 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS10310 PF12911 N-terminal TM domain of oligopeptide transport permease C RK21_RS10315 PF00989 PAS fold RK21_RS10315 PF02954 Bacterial regulatory protein, Fis family RK21_RS10315 PF00158 Sigma-54 interaction domain RK21_RS10325 PF00106 short chain dehydrogenase RK21_RS10330 PF03974 Ecotin RK21_RS10335 PF13193 AMP-binding enzyme C-terminal domain RK21_RS10335 PF00501 AMP-binding enzyme RK21_RS10345 PF12951 Passenger-associated-transport-repeat RK21_RS10365 PF00149 Calcineurin-like phosphoesterase RK21_RS10375 PF00795 Carbon-nitrogen hydrolase RK21_RS10375 PF02540 NAD synthase RK21_RS10385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RK21_RS10385 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RK21_RS10390 PF13193 AMP-binding enzyme C-terminal domain RK21_RS10390 PF00501 AMP-binding enzyme RK21_RS10395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS10395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS10395 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS10395 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS10410 PF07044 Protein of unknown function (DUF1329) RK21_RS10430 PF03601 Conserved hypothetical protein 698 RK21_RS10445 PF07690 Major Facilitator Superfamily RK21_RS10450 PF05853 beta-keto acid cleavage enzyme RK21_RS10455 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RK21_RS10460 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS10460 PF00107 Zinc-binding dehydrogenase RK21_RS10485 PF00375 Sodium:dicarboxylate symporter family RK21_RS10510 PF08448 PAS fold RK21_RS10510 PF00072 Response regulator receiver domain RK21_RS10510 PF13188 PAS domain RK21_RS10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS10510 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS10515 PF03150 Di-haem cytochrome c peroxidase RK21_RS10515 PF00034 Cytochrome c RK21_RS10515 PF14376 Haem-binding domain RK21_RS10520 PF00072 Response regulator receiver domain RK21_RS10520 PF00158 Sigma-54 interaction domain RK21_RS10520 PF02954 Bacterial regulatory protein, Fis family RK21_RS10525 PF02586 SOS response associated peptidase (SRAP) RK21_RS10545 PF02586 SOS response associated peptidase (SRAP) RK21_RS10550 PF01757 Acyltransferase family RK21_RS10600 PF03743 Bacterial conjugation TrbI-like protein RK21_RS10615 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RK21_RS10630 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RK21_RS10640 PF04956 TrbC/VIRB2 family RK21_RS10645 PF00437 Type II/IV secretion system protein RK21_RS10655 PF02534 Type IV secretory system Conjugative DNA transfer RK21_RS10665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS10665 PF03466 LysR substrate binding domain RK21_RS10670 PF01037 Lrp/AsnC ligand binding domain RK21_RS10685 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS10690 PF00376 MerR family regulatory protein RK21_RS10690 PF09278 MerR, DNA binding RK21_RS10695 PF00403 Heavy-metal-associated domain RK21_RS10700 PF01022 Bacterial regulatory protein, arsR family RK21_RS10705 PF07690 Major Facilitator Superfamily RK21_RS10710 PF02583 Metal-sensitive transcriptional repressor RK21_RS10715 PF01545 Cation efflux family RK21_RS10720 PF01022 Bacterial regulatory protein, arsR family RK21_RS10725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS10730 PF00873 AcrB/AcrD/AcrF family RK21_RS10735 PF02321 Outer membrane efflux protein RK21_RS10740 PF13411 MerR HTH family regulatory protein RK21_RS10745 PF07690 Major Facilitator Superfamily RK21_RS10755 PF00462 Glutaredoxin RK21_RS10765 PF10502 Signal peptidase, peptidase S26 RK21_RS10780 PF13614 AAA domain RK21_RS10810 PF05284 Protein of unknown function (DUF736) RK21_RS10820 PF16916 Dimerisation domain of Zinc Transporter RK21_RS10820 PF01545 Cation efflux family RK21_RS10825 PF02583 Metal-sensitive transcriptional repressor RK21_RS10835 PF17762 HTH domain found in ParB protein RK21_RS10835 PF02195 ParB-like nuclease domain RK21_RS10840 PF06067 Domain of unknown function (DUF932) RK21_RS10855 PF17761 DUF1016 N-terminal domain RK21_RS10855 PF06250 YhcG PDDEXK nuclease domain RK21_RS10930 PF00574 Clp protease RK21_RS10935 PF04860 Phage portal protein RK21_RS10980 PF00589 Phage integrase family RK21_RS10980 PF13356 Arm DNA-binding domain RK21_RS10990 PF07102 Protein of unknown function (DUF1364) RK21_RS11050 PF00196 Bacterial regulatory proteins, luxR family RK21_RS11070 PF10065 Uncharacterized conserved protein (DUF2303) RK21_RS11110 PF00145 C-5 cytosine-specific DNA methylase RK21_RS11165 PF00589 Phage integrase family RK21_RS11165 PF02899 Phage integrase, N-terminal SAM-like domain RK21_RS11170 PF00005 ABC transporter RK21_RS11170 PF12848 ABC transporter RK21_RS11175 PF07690 Major Facilitator Superfamily RK21_RS11185 PF02798 Glutathione S-transferase, N-terminal domain RK21_RS11190 PF00072 Response regulator receiver domain RK21_RS11190 PF00158 Sigma-54 interaction domain RK21_RS11190 PF02954 Bacterial regulatory protein, Fis family RK21_RS11205 PF17863 AAA lid domain RK21_RS11205 PF13519 von Willebrand factor type A domain RK21_RS11205 PF07728 AAA domain (dynein-related subfamily) RK21_RS11210 PF02514 CobN/Magnesium Chelatase RK21_RS11215 PF02492 CobW/HypB/UreG, nucleotide-binding domain RK21_RS11215 PF07683 Cobalamin synthesis protein cobW C-terminal domain RK21_RS11225 PF00005 ABC transporter RK21_RS11225 PF12848 ABC transporter RK21_RS11230 PF01063 Amino-transferase class IV RK21_RS11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11240 PF03466 LysR substrate binding domain RK21_RS11260 PF11737 Protein of unknown function (DUF3300) RK21_RS11280 PF00892 EamA-like transporter family RK21_RS11305 PF01965 DJ-1/PfpI family RK21_RS11305 PF12833 Helix-turn-helix domain RK21_RS11315 PF04542 Sigma-70 region 2 RK21_RS11315 PF08281 Sigma-70, region 4 RK21_RS11325 PF01292 Prokaryotic cytochrome b561 RK21_RS11335 PF07883 Cupin domain RK21_RS11335 PF01381 Helix-turn-helix RK21_RS11340 PF01323 DSBA-like thioredoxin domain RK21_RS11345 PF00106 short chain dehydrogenase RK21_RS11360 PF13593 SBF-like CPA transporter family (DUF4137) RK21_RS11365 PF00144 Beta-lactamase RK21_RS11385 PF01906 Putative heavy-metal-binding RK21_RS11390 PF00892 EamA-like transporter family RK21_RS11395 PF00596 Class II Aldolase and Adducin N-terminal domain RK21_RS11405 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS11415 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS11420 PF02525 Flavodoxin-like fold RK21_RS11425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11425 PF03466 LysR substrate binding domain RK21_RS11440 PF02673 Bacitracin resistance protein BacA RK21_RS11445 PF17200 Single Cache domain 2 RK21_RS11445 PF00672 HAMP domain RK21_RS11445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS11500 PF02492 CobW/HypB/UreG, nucleotide-binding domain RK21_RS11505 PF01730 UreF RK21_RS11515 PF05194 UreE urease accessory protein, C-terminal domain RK21_RS11515 PF02814 UreE urease accessory protein, N-terminal domain RK21_RS11520 PF01979 Amidohydrolase family RK21_RS11520 PF00449 Urease alpha-subunit, N-terminal domain RK21_RS11525 PF00699 Urease beta subunit RK21_RS11530 PF00547 Urease, gamma subunit RK21_RS11535 PF01774 UreD urease accessory protein RK21_RS11540 PF00589 Phage integrase family RK21_RS11540 PF02899 Phage integrase, N-terminal SAM-like domain RK21_RS11550 PF04851 Type III restriction enzyme, res subunit RK21_RS11550 PF13307 Helicase C-terminal domain RK21_RS11550 PF04851 Type III restriction enzyme, res subunit RK21_RS11550 PF13307 Helicase C-terminal domain RK21_RS11555 PF08774 VRR-NUC domain RK21_RS11555 PF18081 Fanconi anemia-associated nuclease SAP domain RK21_RS11560 PF07690 Major Facilitator Superfamily RK21_RS11575 PF08666 SAF domain RK21_RS11575 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RK21_RS11580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11580 PF03466 LysR substrate binding domain RK21_RS11585 PF03466 LysR substrate binding domain RK21_RS11585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RK21_RS11590 PF13378 Enolase C-terminal domain-like RK21_RS11595 PF07690 Major Facilitator Superfamily RK21_RS11600 PF00392 Bacterial regulatory proteins, gntR family RK21_RS11600 PF00155 Aminotransferase class I and II RK21_RS11610 PF00698 Acyl transferase domain RK21_RS11610 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS11610 PF00550 Phosphopantetheine attachment site RK21_RS11610 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS11610 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS11610 PF08659 KR domain RK21_RS11610 PF14765 Polyketide synthase dehydratase RK21_RS11610 PF16197 Ketoacyl-synthetase C-terminal extension RK21_RS11615 PF03466 LysR substrate binding domain RK21_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11625 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RK21_RS11625 PF04055 Radical SAM superfamily RK21_RS11630 PF08669 Glycine cleavage T-protein C-terminal barrel domain RK21_RS11630 PF01571 Aminomethyltransferase folate-binding domain RK21_RS11635 PF00464 Serine hydroxymethyltransferase RK21_RS11640 PF02347 Glycine cleavage system P-protein RK21_RS11645 PF01597 Glycine cleavage H-protein RK21_RS11650 PF18024 Helix-turn-helix domain RK21_RS11650 PF00158 Sigma-54 interaction domain RK21_RS11655 PF00324 Amino acid permease RK21_RS11660 PF00732 GMC oxidoreductase RK21_RS11660 PF05199 GMC oxidoreductase RK21_RS11675 PF00171 Aldehyde dehydrogenase family RK21_RS11680 PF00491 Arginase family RK21_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11685 PF03466 LysR substrate binding domain RK21_RS11690 PF03466 LysR substrate binding domain RK21_RS11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11700 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS11705 PF03458 UPF0126 domain RK21_RS11710 PF01609 Transposase DDE domain RK21_RS11710 PF05598 Transposase domain (DUF772) RK21_RS11715 PF01042 Endoribonuclease L-PSP RK21_RS11720 PF02525 Flavodoxin-like fold RK21_RS11725 PF13411 MerR HTH family regulatory protein RK21_RS11745 PF00106 short chain dehydrogenase RK21_RS11755 PF00202 Aminotransferase class-III RK21_RS11765 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS11765 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS11775 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS11775 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS11780 PF00550 Phosphopantetheine attachment site RK21_RS11785 PF00654 Voltage gated chloride channel RK21_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS11790 PF03466 LysR substrate binding domain RK21_RS11820 PF13520 Amino acid permease RK21_RS11830 PF00156 Phosphoribosyl transferase domain RK21_RS11840 PF00582 Universal stress protein family RK21_RS11850 PF14572 Phosphoribosyl synthetase-associated domain RK21_RS11850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RK21_RS11855 PF00582 Universal stress protein family RK21_RS11860 PF00118 TCP-1/cpn60 chaperonin family RK21_RS11875 PF01434 Peptidase family M41 RK21_RS11875 PF06480 FtsH Extracellular RK21_RS11875 PF17862 AAA+ lid domain RK21_RS11875 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS11885 PF09364 XFP N-terminal domain RK21_RS11885 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RK21_RS11885 PF09363 XFP C-terminal domain RK21_RS11890 PF00478 IMP dehydrogenase / GMP reductase domain RK21_RS11890 PF00571 CBS domain RK21_RS11895 PF00011 Hsp20/alpha crystallin family RK21_RS11905 PF00027 Cyclic nucleotide-binding domain RK21_RS11905 PF00325 Bacterial regulatory proteins, crp family RK21_RS11925 PF05139 Erythromycin esterase RK21_RS11925 PF00156 Phosphoribosyl transferase domain RK21_RS11935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RK21_RS11935 PF00753 Metallo-beta-lactamase superfamily RK21_RS11935 PF10996 Beta-Casp domain RK21_RS11960 PF00027 Cyclic nucleotide-binding domain RK21_RS11960 PF13545 Crp-like helix-turn-helix domain RK21_RS11970 PF05552 Conserved TM helix RK21_RS11970 PF00924 Mechanosensitive ion channel RK21_RS11975 PF00106 short chain dehydrogenase RK21_RS11980 PF01494 FAD binding domain RK21_RS11985 PF00221 Aromatic amino acid lyase RK21_RS11990 PF00005 ABC transporter RK21_RS11990 PF00571 CBS domain RK21_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS12010 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS12010 PF00563 EAL domain RK21_RS12010 PF03707 Bacterial signalling protein N terminal repeat RK21_RS12010 PF13188 PAS domain RK21_RS12020 PF00392 Bacterial regulatory proteins, gntR family RK21_RS12020 PF00155 Aminotransferase class I and II RK21_RS12025 PF01261 Xylose isomerase-like TIM barrel RK21_RS12030 PF07690 Major Facilitator Superfamily RK21_RS12035 PF14403 Circularly permuted ATP-grasp type 2 RK21_RS12040 PF04168 A predicted alpha-helical domain with a conserved ER motif. RK21_RS12040 PF14403 Circularly permuted ATP-grasp type 2 RK21_RS12045 PF08379 Bacterial transglutaminase-like N-terminal region RK21_RS12045 PF01841 Transglutaminase-like superfamily RK21_RS12055 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS12055 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RK21_RS12055 PF01488 Shikimate / quinate 5-dehydrogenase RK21_RS12060 PF02515 CoA-transferase family III RK21_RS12065 PF01575 MaoC like domain RK21_RS12075 PF02558 Ketopantoate reductase PanE/ApbA RK21_RS12075 PF08546 Ketopantoate reductase PanE/ApbA C terminal RK21_RS12080 PF03466 LysR substrate binding domain RK21_RS12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12085 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS12095 PF02560 Cyanate lyase C-terminal domain RK21_RS12100 PF00484 Carbonic anhydrase RK21_RS12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12105 PF03466 LysR substrate binding domain RK21_RS12130 PF07859 alpha/beta hydrolase fold RK21_RS12140 PF01965 DJ-1/PfpI family RK21_RS12150 PF00682 HMGL-like RK21_RS12150 PF08502 LeuA allosteric (dimerisation) domain RK21_RS12160 PF00593 TonB dependent receptor RK21_RS12160 PF07715 TonB-dependent Receptor Plug Domain RK21_RS12180 PF08338 Domain of unknown function (DUF1731) RK21_RS12180 PF01370 NAD dependent epimerase/dehydratase family RK21_RS12185 PF00563 EAL domain RK21_RS12185 PF01590 GAF domain RK21_RS12185 PF00360 Phytochrome region RK21_RS12185 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS12195 PF03573 outer membrane porin, OprD family RK21_RS12200 PF03600 Citrate transporter RK21_RS12205 PF00375 Sodium:dicarboxylate symporter family RK21_RS12210 PF04303 PrpF protein RK21_RS12215 PF03466 LysR substrate binding domain RK21_RS12215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12230 PF03466 LysR substrate binding domain RK21_RS12235 PF01022 Bacterial regulatory protein, arsR family RK21_RS12240 PF01758 Sodium Bile acid symporter family RK21_RS12245 PF03358 NADPH-dependent FMN reductase RK21_RS12250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RK21_RS12250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK21_RS12260 PF08659 KR domain RK21_RS12260 PF00550 Phosphopantetheine attachment site RK21_RS12260 PF14765 Polyketide synthase dehydratase RK21_RS12260 PF00698 Acyl transferase domain RK21_RS12260 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS12265 PF03466 LysR substrate binding domain RK21_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12270 PF03466 LysR substrate binding domain RK21_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12280 PF00557 Metallopeptidase family M24 RK21_RS12280 PF01321 Creatinase/Prolidase N-terminal domain RK21_RS12290 PF02633 Creatinine amidohydrolase RK21_RS12295 PF00324 Amino acid permease RK21_RS12300 PF12833 Helix-turn-helix domain RK21_RS12300 PF01965 DJ-1/PfpI family RK21_RS12305 PF00462 Glutaredoxin RK21_RS12330 PF00107 Zinc-binding dehydrogenase RK21_RS12330 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS12330 PF13823 Alcohol dehydrogenase GroES-associated RK21_RS12340 PF18146 Damage-inducible protein CinA KH domain RK21_RS12340 PF00994 Probable molybdopterin binding domain RK21_RS12340 PF02464 Competence-damaged protein RK21_RS12350 PF04239 Protein of unknown function (DUF421) RK21_RS12365 PF00924 Mechanosensitive ion channel RK21_RS12395 PF01226 Formate/nitrite transporter RK21_RS12400 PF00392 Bacterial regulatory proteins, gntR family RK21_RS12400 PF07729 FCD domain RK21_RS12405 PF02653 Branched-chain amino acid transport system / permease component RK21_RS12410 PF00005 ABC transporter RK21_RS12415 PF13407 Periplasmic binding protein domain RK21_RS12420 PF00171 Aldehyde dehydrogenase family RK21_RS12425 PF04966 Carbohydrate-selective porin, OprB family RK21_RS12430 PF00465 Iron-containing alcohol dehydrogenase RK21_RS12435 PF00465 Iron-containing alcohol dehydrogenase RK21_RS12440 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS12440 PF01488 Shikimate / quinate 5-dehydrogenase RK21_RS12450 PF00465 Iron-containing alcohol dehydrogenase RK21_RS12455 PF00456 Transketolase, thiamine diphosphate binding domain RK21_RS12460 PF02780 Transketolase, C-terminal domain RK21_RS12460 PF02779 Transketolase, pyrimidine binding domain RK21_RS12465 PF00083 Sugar (and other) transporter RK21_RS12470 PF02321 Outer membrane efflux protein RK21_RS12475 PF00873 AcrB/AcrD/AcrF family RK21_RS12480 PF13533 Biotin-lipoyl like RK21_RS12485 PF01740 STAS domain RK21_RS12485 PF00916 Sulfate permease family RK21_RS12490 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS12490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS12495 PF00465 Iron-containing alcohol dehydrogenase RK21_RS12500 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RK21_RS12505 PF00171 Aldehyde dehydrogenase family RK21_RS12510 PF01011 PQQ enzyme repeat RK21_RS12510 PF13360 PQQ-like domain RK21_RS12515 PF00753 Metallo-beta-lactamase superfamily RK21_RS12530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS12535 PF13360 PQQ-like domain RK21_RS12535 PF01011 PQQ enzyme repeat RK21_RS12545 PF00072 Response regulator receiver domain RK21_RS12545 PF00196 Bacterial regulatory proteins, luxR family RK21_RS12550 PF07730 Histidine kinase RK21_RS12550 PF00672 HAMP domain RK21_RS12550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS12565 PF00005 ABC transporter RK21_RS12580 PF00072 Response regulator receiver domain RK21_RS12580 PF00196 Bacterial regulatory proteins, luxR family RK21_RS12585 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS12585 PF09456 RcsC Alpha-Beta-Loop (ABL) RK21_RS12585 PF00072 Response regulator receiver domain RK21_RS12600 PF13411 MerR HTH family regulatory protein RK21_RS12605 PF01740 STAS domain RK21_RS12605 PF13426 PAS domain RK21_RS12615 PF00106 short chain dehydrogenase RK21_RS12640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein RK21_RS12655 PF01381 Helix-turn-helix RK21_RS12660 PF00202 Aminotransferase class-III RK21_RS12665 PF07722 Peptidase C26 RK21_RS12670 PF00120 Glutamine synthetase, catalytic domain RK21_RS12675 PF01381 Helix-turn-helix RK21_RS12690 PF00005 ABC transporter RK21_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS12705 PF12849 PBP superfamily domain RK21_RS12725 PF07690 Major Facilitator Superfamily RK21_RS12730 PF02705 K+ potassium transporter RK21_RS12745 PF12729 Four helix bundle sensory module for signal transduction RK21_RS12745 PF00672 HAMP domain RK21_RS12745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS12760 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS12760 PF03473 MOSC domain RK21_RS12760 PF03476 MOSC N-terminal beta barrel domain RK21_RS12765 PF00701 Dihydrodipicolinate synthetase family RK21_RS12790 PF04717 Type VI secretion system, phage-baseplate injector RK21_RS12790 PF13296 Putative type VI secretion system Rhs element Vgr RK21_RS12790 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) RK21_RS12800 PF02626 Carboxyltransferase domain, subdomain A and B RK21_RS12810 PF03746 LamB/YcsF family RK21_RS12815 PF03466 LysR substrate binding domain RK21_RS12815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS12820 PF00005 ABC transporter RK21_RS12820 PF00664 ABC transporter transmembrane region RK21_RS12825 PF01614 Bacterial transcriptional regulator RK21_RS12825 PF09339 IclR helix-turn-helix domain RK21_RS12830 PF08402 TOBE domain RK21_RS12830 PF00005 ABC transporter RK21_RS12835 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS12850 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS12850 PF04324 BFD-like [2Fe-2S] binding domain RK21_RS12855 PF01266 FAD dependent oxidoreductase RK21_RS12865 PF01614 Bacterial transcriptional regulator RK21_RS12865 PF09339 IclR helix-turn-helix domain RK21_RS12870 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS12870 PF01488 Shikimate / quinate 5-dehydrogenase RK21_RS12870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RK21_RS12875 PF00890 FAD binding domain RK21_RS12885 PF00890 FAD binding domain RK21_RS12900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RK21_RS12900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RK21_RS12910 PF00890 FAD binding domain RK21_RS12915 PF01966 HD domain RK21_RS12920 PF00171 Aldehyde dehydrogenase family RK21_RS12925 PF00202 Aminotransferase class-III RK21_RS12930 PF00196 Bacterial regulatory proteins, luxR family RK21_RS12930 PF00072 Response regulator receiver domain RK21_RS12935 PF00324 Amino acid permease RK21_RS12940 PF00171 Aldehyde dehydrogenase family RK21_RS12945 PF01979 Amidohydrolase family RK21_RS12960 PF00884 Sulfatase RK21_RS12970 PF02470 MlaD protein RK21_RS12975 PF04403 Paraquat-inducible protein A RK21_RS13000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS13005 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS13010 PF00486 Transcriptional regulatory protein, C terminal RK21_RS13010 PF00072 Response regulator receiver domain RK21_RS13020 PF00106 short chain dehydrogenase RK21_RS13030 PF00501 AMP-binding enzyme RK21_RS13050 PF00083 Sugar (and other) transporter RK21_RS13050 PF07690 Major Facilitator Superfamily RK21_RS13055 PF00561 alpha/beta hydrolase fold RK21_RS13060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS13065 PF00561 alpha/beta hydrolase fold RK21_RS13075 PF00580 UvrD/REP helicase N-terminal domain RK21_RS13075 PF12462 DNA helicase IV / RNA helicase N terminal RK21_RS13075 PF13361 UvrD-like helicase C-terminal domain RK21_RS13080 PF17954 Quercetinase C-terminal cupin domain RK21_RS13080 PF02678 Pirin RK21_RS13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13090 PF03466 LysR substrate binding domain RK21_RS13095 PF00375 Sodium:dicarboxylate symporter family RK21_RS13100 PF05681 Fumarate hydratase (Fumerase) RK21_RS13105 PF05683 Fumarase C-terminus RK21_RS13115 PF00005 ABC transporter RK21_RS13115 PF00664 ABC transporter transmembrane region RK21_RS13120 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS13125 PF02321 Outer membrane efflux protein RK21_RS13130 PF00563 EAL domain RK21_RS13130 PF13188 PAS domain RK21_RS13130 PF03707 Bacterial signalling protein N terminal repeat RK21_RS13130 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS13145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS13145 PF01261 Xylose isomerase-like TIM barrel RK21_RS13150 PF07690 Major Facilitator Superfamily RK21_RS13150 PF00083 Sugar (and other) transporter RK21_RS13155 PF00282 Pyridoxal-dependent decarboxylase conserved domain RK21_RS13160 PF03466 LysR substrate binding domain RK21_RS13160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13165 PF01709 Transcriptional regulator RK21_RS13170 PF01266 FAD dependent oxidoreductase RK21_RS13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13180 PF03466 LysR substrate binding domain RK21_RS13195 PF00324 Amino acid permease RK21_RS13200 PF00392 Bacterial regulatory proteins, gntR family RK21_RS13200 PF00155 Aminotransferase class I and II RK21_RS13210 PF00850 Histone deacetylase domain RK21_RS13215 PF07687 Peptidase dimerisation domain RK21_RS13215 PF01546 Peptidase family M20/M25/M40 RK21_RS13220 PF00083 Sugar (and other) transporter RK21_RS13225 PF03466 LysR substrate binding domain RK21_RS13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13235 PF05016 ParE toxin of type II toxin-antitoxin system, parDE RK21_RS13245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS13250 PF07690 Major Facilitator Superfamily RK21_RS13255 PF00107 Zinc-binding dehydrogenase RK21_RS13255 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS13265 PF00106 short chain dehydrogenase RK21_RS13275 PF00465 Iron-containing alcohol dehydrogenase RK21_RS13280 PF07690 Major Facilitator Superfamily RK21_RS13285 PF03466 LysR substrate binding domain RK21_RS13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13300 PF00043 Glutathione S-transferase, C-terminal domain RK21_RS13300 PF13417 Glutathione S-transferase, N-terminal domain RK21_RS13305 PF07690 Major Facilitator Superfamily RK21_RS13310 PF03466 LysR substrate binding domain RK21_RS13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13330 PF01965 DJ-1/PfpI family RK21_RS13330 PF12833 Helix-turn-helix domain RK21_RS13345 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS13380 PF04960 Glutaminase RK21_RS13385 PF04960 Glutaminase RK21_RS13390 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS13405 PF05638 Type VI secretion system effector, Hcp RK21_RS13410 PF01966 HD domain RK21_RS13425 PF00665 Integrase core domain RK21_RS13425 PF13936 Helix-turn-helix domain RK21_RS13435 PF13356 Arm DNA-binding domain RK21_RS13435 PF00589 Phage integrase family RK21_RS13490 PF04002 RadC-like JAB domain RK21_RS13560 PF00665 Integrase core domain RK21_RS13565 PF01695 IstB-like ATP binding protein RK21_RS13590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RK21_RS13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13600 PF03466 LysR substrate binding domain RK21_RS13605 PF02233 NAD(P) transhydrogenase beta subunit RK21_RS13610 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RK21_RS13615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RK21_RS13615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RK21_RS13625 PF01012 Electron transfer flavoprotein domain RK21_RS13625 PF00766 Electron transfer flavoprotein FAD-binding domain RK21_RS13630 PF01012 Electron transfer flavoprotein domain RK21_RS13635 PF02515 CoA-transferase family III RK21_RS13640 PF00108 Thiolase, N-terminal domain RK21_RS13640 PF02803 Thiolase, C-terminal domain RK21_RS13645 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RK21_RS13645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS13645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS13650 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS13660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS13660 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS13660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS13665 PF07690 Major Facilitator Superfamily RK21_RS13670 PF12833 Helix-turn-helix domain RK21_RS13675 PF07859 alpha/beta hydrolase fold RK21_RS13680 PF00743 Flavin-binding monooxygenase-like RK21_RS13690 PF00107 Zinc-binding dehydrogenase RK21_RS13690 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS13695 PF00171 Aldehyde dehydrogenase family RK21_RS13705 PF05721 Phytanoyl-CoA dioxygenase (PhyH) RK21_RS13715 PF00107 Zinc-binding dehydrogenase RK21_RS13715 PF16884 N-terminal domain of oxidoreductase RK21_RS13720 PF02796 Helix-turn-helix domain of resolvase RK21_RS13720 PF00239 Resolvase, N terminal domain RK21_RS13735 PF01526 Tn3 transposase DDE domain RK21_RS13735 PF13700 Domain of unknown function (DUF4158) RK21_RS13745 PF00403 Heavy-metal-associated domain RK21_RS13750 PF02411 MerT mercuric transport protein RK21_RS13755 PF09278 MerR, DNA binding RK21_RS13755 PF00376 MerR family regulatory protein RK21_RS13765 PF00005 ABC transporter RK21_RS13770 PF00005 ABC transporter RK21_RS13770 PF12399 Branched-chain amino acid ATP-binding cassette transporter RK21_RS13775 PF02653 Branched-chain amino acid transport system / permease component RK21_RS13780 PF00171 Aldehyde dehydrogenase family RK21_RS13785 PF00202 Aminotransferase class-III RK21_RS13790 PF01266 FAD dependent oxidoreductase RK21_RS13795 PF08943 CsiD RK21_RS13800 PF07729 FCD domain RK21_RS13800 PF00392 Bacterial regulatory proteins, gntR family RK21_RS13805 PF01968 Hydantoinase/oxoprolinase RK21_RS13805 PF05378 Hydantoinase/oxoprolinase N-terminal region RK21_RS13810 PF02538 Hydantoinase B/oxoprolinase RK21_RS13815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS13830 PF00766 Electron transfer flavoprotein FAD-binding domain RK21_RS13830 PF01012 Electron transfer flavoprotein domain RK21_RS13835 PF01012 Electron transfer flavoprotein domain RK21_RS13840 PF02515 CoA-transferase family III RK21_RS13845 PF00108 Thiolase, N-terminal domain RK21_RS13845 PF02803 Thiolase, C-terminal domain RK21_RS13850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS13850 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RK21_RS13850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS13855 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS13860 PF09339 IclR helix-turn-helix domain RK21_RS13865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS13865 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS13865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS13875 PF01361 Tautomerase enzyme RK21_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13880 PF03466 LysR substrate binding domain RK21_RS13885 PF00440 Bacterial regulatory proteins, tetR family RK21_RS13885 PF16925 Tetracyclin repressor-like, C-terminal domain RK21_RS13895 PF05598 Transposase domain (DUF772) RK21_RS13895 PF01609 Transposase DDE domain RK21_RS13900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS13900 PF01348 Type II intron maturase RK21_RS13905 PF01609 Transposase DDE domain RK21_RS13905 PF05598 Transposase domain (DUF772) RK21_RS13910 PF02371 Transposase IS116/IS110/IS902 family RK21_RS13910 PF01548 Transposase RK21_RS13915 PF00005 ABC transporter RK21_RS13925 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS13930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS13930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS13935 PF03466 LysR substrate binding domain RK21_RS13940 PF01548 Transposase RK21_RS13940 PF02371 Transposase IS116/IS110/IS902 family RK21_RS13950 PF13333 Integrase core domain RK21_RS13950 PF00665 Integrase core domain RK21_RS13950 PF13276 HTH-like domain RK21_RS13955 PF00665 Integrase core domain RK21_RS13960 PF01695 IstB-like ATP binding protein RK21_RS13965 PF05717 IS66 Orf2 like protein RK21_RS14000 PF13438 Domain of unknown function (DUF4113) RK21_RS14000 PF00817 impB/mucB/samB family RK21_RS14000 PF11799 impB/mucB/samB family C-terminal domain RK21_RS14030 PF00216 Bacterial DNA-binding protein RK21_RS14035 PF03484 tRNA synthetase B5 domain RK21_RS14035 PF03483 B3/4 domain RK21_RS14035 PF03147 Ferredoxin-fold anticodon binding domain RK21_RS14035 PF01588 Putative tRNA binding domain RK21_RS14035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RK21_RS14040 PF01409 tRNA synthetases class II core domain (F) RK21_RS14040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RK21_RS14045 PF00453 Ribosomal protein L20 RK21_RS14050 PF01632 Ribosomal protein L35 RK21_RS14055 PF05198 Translation initiation factor IF-3, N-terminal domain RK21_RS14055 PF00707 Translation initiation factor IF-3, C-terminal domain RK21_RS14060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RK21_RS14060 PF03129 Anticodon binding domain RK21_RS14060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RK21_RS14060 PF02824 TGS domain RK21_RS14070 PF00313 'Cold-shock' DNA-binding domain RK21_RS14080 PF06250 YhcG PDDEXK nuclease domain RK21_RS14080 PF17761 DUF1016 N-terminal domain RK21_RS14085 PF04002 RadC-like JAB domain RK21_RS14090 PF03358 NADPH-dependent FMN reductase RK21_RS14095 PF03960 ArsC family RK21_RS14100 PF01758 Sodium Bile acid symporter family RK21_RS14105 PF02374 Anion-transporting ATPase RK21_RS14110 PF06953 Arsenical resistance operon trans-acting repressor ArsD RK21_RS14125 PF01022 Bacterial regulatory protein, arsR family RK21_RS14135 PF06067 Domain of unknown function (DUF932) RK21_RS14140 PF02195 ParB-like nuclease domain RK21_RS14155 PF05284 Protein of unknown function (DUF736) RK21_RS14185 PF13614 AAA domain RK21_RS14200 PF10502 Signal peptidase, peptidase S26 RK21_RS14220 PF00296 Luciferase-like monooxygenase RK21_RS14240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS14245 PF00873 AcrB/AcrD/AcrF family RK21_RS14250 PF02321 Outer membrane efflux protein RK21_RS14265 PF02534 Type IV secretory system Conjugative DNA transfer RK21_RS14275 PF00437 Type II/IV secretion system protein RK21_RS14280 PF04956 TrbC/VIRB2 family RK21_RS14290 PF03135 CagE, TrbE, VirB family, component of type IV transporter system RK21_RS14305 PF04610 TrbL/VirB6 plasmid conjugal transfer protein RK21_RS14315 PF03524 Conjugal transfer protein RK21_RS14320 PF03743 Bacterial conjugation TrbI-like protein RK21_RS14340 PF01156 Inosine-uridine preferring nucleoside hydrolase RK21_RS14345 PF05025 RbsD / FucU transport protein family RK21_RS14350 PF00294 pfkB family carbohydrate kinase RK21_RS14355 PF00356 Bacterial regulatory proteins, lacI family RK21_RS14360 PF02653 Branched-chain amino acid transport system / permease component RK21_RS14365 PF00005 ABC transporter RK21_RS14370 PF13407 Periplasmic binding protein domain RK21_RS14375 PF17763 Glutaminase/Asparaginase C-terminal domain RK21_RS14375 PF00710 Asparaginase, N-terminal RK21_RS14385 PF13291 ACT domain RK21_RS14385 PF04607 Region found in RelA / SpoT proteins RK21_RS14385 PF02824 TGS domain RK21_RS14405 PF01266 FAD dependent oxidoreductase RK21_RS14415 PF03741 Integral membrane protein TerC family RK21_RS14415 PF03471 Transporter associated domain RK21_RS14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS14425 PF03466 LysR substrate binding domain RK21_RS14430 PF07715 TonB-dependent Receptor Plug Domain RK21_RS14430 PF00593 TonB dependent receptor RK21_RS14445 PF01032 FecCD transport family RK21_RS14450 PF00005 ABC transporter RK21_RS14455 PF03573 outer membrane porin, OprD family RK21_RS14465 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS14470 PF13614 AAA domain RK21_RS14480 PF00593 TonB dependent receptor RK21_RS14480 PF07715 TonB-dependent Receptor Plug Domain RK21_RS14485 PF08946 Osmosensory transporter coiled coil RK21_RS14485 PF00083 Sugar (and other) transporter RK21_RS14490 PF00873 AcrB/AcrD/AcrF family RK21_RS14495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS14495 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS14500 PF02321 Outer membrane efflux protein RK21_RS14505 PF01220 Dehydroquinase class II RK21_RS14510 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS14510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RK21_RS14515 PF17991 Thioredoxin like C-terminal domain RK21_RS14515 PF02683 Cytochrome C biogenesis protein transmembrane region RK21_RS14515 PF00578 AhpC/TSA family RK21_RS14525 PF00486 Transcriptional regulatory protein, C terminal RK21_RS14525 PF00072 Response regulator receiver domain RK21_RS14530 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS14530 PF00672 HAMP domain RK21_RS14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS14540 PF07681 DoxX RK21_RS14550 PF05114 Protein of unknown function (DUF692) RK21_RS14570 PF00136 DNA polymerase family B RK21_RS14570 PF03104 DNA polymerase family B, exonuclease domain RK21_RS14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS14575 PF03466 LysR substrate binding domain RK21_RS14580 PF08892 YqcI/YcgG family RK21_RS14610 PF12833 Helix-turn-helix domain RK21_RS14625 PF02630 SCO1/SenC RK21_RS14630 PF01106 NifU-like domain RK21_RS14630 PF01521 Iron-sulphur cluster biosynthesis RK21_RS14635 PF01757 Acyltransferase family RK21_RS14645 PF02310 B12 binding domain RK21_RS14645 PF02574 Homocysteine S-methyltransferase RK21_RS14645 PF00809 Pterin binding enzyme RK21_RS14645 PF02607 B12 binding domain RK21_RS14645 PF02965 Vitamin B12 dependent methionine synthase, activation domain RK21_RS14660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RK21_RS14660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RK21_RS14670 PF00248 Aldo/keto reductase family RK21_RS14685 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS14685 PF00672 HAMP domain RK21_RS14690 PF00072 Response regulator receiver domain RK21_RS14690 PF00486 Transcriptional regulatory protein, C terminal RK21_RS14695 PF04333 MlaA lipoprotein RK21_RS14705 PF07690 Major Facilitator Superfamily RK21_RS14710 PF12833 Helix-turn-helix domain RK21_RS14710 PF02311 AraC-like ligand binding domain RK21_RS14715 PF00246 Zinc carboxypeptidase RK21_RS14715 PF18027 Cytosolic carboxypeptidase N-terminal domain RK21_RS14755 PF08446 PAS fold RK21_RS14755 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS14755 PF00360 Phytochrome region RK21_RS14755 PF01590 GAF domain RK21_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS14760 PF00072 Response regulator receiver domain RK21_RS14760 PF00486 Transcriptional regulatory protein, C terminal RK21_RS14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS14765 PF00072 Response regulator receiver domain RK21_RS14765 PF13188 PAS domain RK21_RS14765 PF08448 PAS fold RK21_RS14765 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS14785 PF03969 AFG1-like ATPase RK21_RS14790 PF16177 Acetyl-coenzyme A synthetase N-terminus RK21_RS14790 PF00501 AMP-binding enzyme RK21_RS14790 PF13193 AMP-binding enzyme C-terminal domain RK21_RS14795 PF03466 LysR substrate binding domain RK21_RS14795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS14800 PF00571 CBS domain RK21_RS14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS14810 PF00486 Transcriptional regulatory protein, C terminal RK21_RS14810 PF00072 Response regulator receiver domain RK21_RS14830 PF01242 6-pyruvoyl tetrahydropterin synthase RK21_RS14840 PF00330 Aconitase family (aconitate hydratase) RK21_RS14840 PF06434 Aconitate hydratase 2 N-terminus RK21_RS14840 PF11791 Aconitate B N-terminal domain RK21_RS14845 PF03972 MmgE/PrpD family RK21_RS14850 PF04303 PrpF protein RK21_RS14855 PF00694 Aconitase C-terminal domain RK21_RS14855 PF00330 Aconitase family (aconitate hydratase) RK21_RS14860 PF00285 Citrate synthase, C-terminal domain RK21_RS14870 PF07729 FCD domain RK21_RS14870 PF00392 Bacterial regulatory proteins, gntR family RK21_RS14875 PF08443 RimK-like ATP-grasp domain RK21_RS14875 PF18030 RimK PreATP-grasp domain RK21_RS14890 PF04715 Anthranilate synthase component I, N terminal region RK21_RS14890 PF00425 chorismate binding enzyme RK21_RS14895 PF01507 Phosphoadenosine phosphosulfate reductase family RK21_RS14900 PF03466 LysR substrate binding domain RK21_RS14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS14905 PF00582 Universal stress protein family RK21_RS14910 PF02558 Ketopantoate reductase PanE/ApbA RK21_RS14910 PF08546 Ketopantoate reductase PanE/ApbA C terminal RK21_RS14915 PF00793 DAHP synthetase I family RK21_RS14925 PF11839 Alanine-zipper, major outer membrane lipoprotein RK21_RS14930 PF03734 L,D-transpeptidase catalytic domain RK21_RS14930 PF17969 L,D-transpeptidase C-terminal domain RK21_RS14930 PF01476 LysM domain RK21_RS14940 PF13472 GDSL-like Lipase/Acylhydrolase family RK21_RS14945 PF00005 ABC transporter RK21_RS14955 PF01272 Transcription elongation factor, GreA/GreB, C-term RK21_RS14955 PF03449 Transcription elongation factor, N-terminal RK21_RS14965 PF07681 DoxX RK21_RS14970 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS14970 PF01464 Transglycosylase SLT domain RK21_RS14975 PF01026 TatD related DNase RK21_RS14980 PF12729 Four helix bundle sensory module for signal transduction RK21_RS14980 PF00672 HAMP domain RK21_RS14980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS15005 PF01734 Patatin-like phospholipase RK21_RS15010 PF05698 Bacterial trigger factor protein (TF) C-terminus RK21_RS15015 PF00216 Bacterial DNA-binding protein RK21_RS15020 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS15020 PF02190 ATP-dependent protease La (LON) substrate-binding domain RK21_RS15020 PF05362 Lon protease (S16) C-terminal proteolytic domain RK21_RS15025 PF06689 ClpX C4-type zinc finger RK21_RS15025 PF10431 C-terminal, D2-small domain, of ClpB protein RK21_RS15025 PF07724 AAA domain (Cdc48 subfamily) RK21_RS15030 PF00574 Clp protease RK21_RS15035 PF05697 Bacterial trigger factor protein (TF) RK21_RS15035 PF05698 Bacterial trigger factor protein (TF) C-terminus RK21_RS15035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS15065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RK21_RS15065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RK21_RS15080 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS15085 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS15090 PF00005 ABC transporter RK21_RS15090 PF17912 MalK OB fold domain RK21_RS15095 PF17912 MalK OB fold domain RK21_RS15095 PF00005 ABC transporter RK21_RS15100 PF01590 GAF domain RK21_RS15100 PF02954 Bacterial regulatory protein, Fis family RK21_RS15100 PF00158 Sigma-54 interaction domain RK21_RS15105 PF02423 Ornithine cyclodeaminase/mu-crystallin family RK21_RS15110 PF01037 Lrp/AsnC ligand binding domain RK21_RS15115 PF00563 EAL domain RK21_RS15115 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS15115 PF03707 Bacterial signalling protein N terminal repeat RK21_RS15120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS15120 PF08447 PAS fold RK21_RS15130 PF00375 Sodium:dicarboxylate symporter family RK21_RS15135 PF00392 Bacterial regulatory proteins, gntR family RK21_RS15135 PF07729 FCD domain RK21_RS15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS15155 PF03466 LysR substrate binding domain RK21_RS15160 PF02743 Cache domain RK21_RS15160 PF00672 HAMP domain RK21_RS15160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS15170 PF01042 Endoribonuclease L-PSP RK21_RS15175 PF01266 FAD dependent oxidoreductase RK21_RS15185 PF01925 Sulfite exporter TauE/SafE RK21_RS15195 PF00593 TonB dependent receptor RK21_RS15195 PF07715 TonB-dependent Receptor Plug Domain RK21_RS15200 PF07690 Major Facilitator Superfamily RK21_RS15205 PF06472 ABC transporter transmembrane region 2 RK21_RS15205 PF00005 ABC transporter RK21_RS15225 PF00892 EamA-like transporter family RK21_RS15260 PF00857 Isochorismatase family RK21_RS15265 PF01381 Helix-turn-helix RK21_RS15275 PF13244 Domain of unknown function (DUF4040) RK21_RS15275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RK21_RS15275 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RK21_RS15275 PF00361 Proton-conducting membrane transporter RK21_RS15280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RK21_RS15285 PF00361 Proton-conducting membrane transporter RK21_RS15295 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RK21_RS15300 PF03334 Na+/H+ antiporter subunit RK21_RS15320 PF01258 Prokaryotic dksA/traR C4-type zinc finger RK21_RS15330 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS15335 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS15335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS15340 PF00108 Thiolase, N-terminal domain RK21_RS15340 PF02803 Thiolase, C-terminal domain RK21_RS15345 PF00106 short chain dehydrogenase RK21_RS15350 PF00501 AMP-binding enzyme RK21_RS15350 PF13193 AMP-binding enzyme C-terminal domain RK21_RS15365 PF12833 Helix-turn-helix domain RK21_RS15365 PF02311 AraC-like ligand binding domain RK21_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS15370 PF03466 LysR substrate binding domain RK21_RS15375 PF00266 Aminotransferase class-V RK21_RS15380 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS15390 PF01136 Peptidase family U32 RK21_RS15390 PF16325 Peptidase family U32 C-terminal domain RK21_RS15405 PF09335 SNARE associated Golgi protein RK21_RS15410 PF00561 alpha/beta hydrolase fold RK21_RS15420 PF03969 AFG1-like ATPase RK21_RS15425 PF07995 Glucose / Sorbosone dehydrogenase RK21_RS15435 PF00491 Arginase family RK21_RS15440 PF13416 Bacterial extracellular solute-binding protein RK21_RS15445 PF03466 LysR substrate binding domain RK21_RS15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS15450 PF07715 TonB-dependent Receptor Plug Domain RK21_RS15450 PF00593 TonB dependent receptor RK21_RS15455 PF04545 Sigma-70, region 4 RK21_RS15455 PF04542 Sigma-70 region 2 RK21_RS15475 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) RK21_RS15480 PF00582 Universal stress protein family RK21_RS15490 PF12838 4Fe-4S dicluster domain RK21_RS15490 PF01568 Molydopterin dinucleotide binding domain RK21_RS15490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RK21_RS15490 PF00384 Molybdopterin oxidoreductase RK21_RS15490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS15495 PF10531 SLBB domain RK21_RS15495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RK21_RS15495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RK21_RS15550 PF01207 Dihydrouridine synthase (Dus) RK21_RS15555 PF00923 Transaldolase/Fructose-6-phosphate aldolase RK21_RS15570 PF00072 Response regulator receiver domain RK21_RS15570 PF00196 Bacterial regulatory proteins, luxR family RK21_RS15580 PF04333 MlaA lipoprotein RK21_RS15595 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term RK21_RS15595 PF14489 QueF-like protein RK21_RS15600 PF00486 Transcriptional regulatory protein, C terminal RK21_RS15600 PF00072 Response regulator receiver domain RK21_RS15605 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS15605 PF00672 HAMP domain RK21_RS15610 PF12704 MacB-like periplasmic core domain RK21_RS15610 PF02687 FtsX-like permease family RK21_RS15615 PF00005 ABC transporter RK21_RS15620 PF12704 MacB-like periplasmic core domain RK21_RS15620 PF02687 FtsX-like permease family RK21_RS15630 PF03009 Glycerophosphoryl diester phosphodiesterase family RK21_RS15635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK21_RS15635 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS15640 PF02424 ApbE family RK21_RS15645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RK21_RS15645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK21_RS15650 PF17757 UvrB interaction domain RK21_RS15650 PF00270 DEAD/DEAH box helicase RK21_RS15650 PF00271 Helicase conserved C-terminal domain RK21_RS15650 PF03461 TRCF domain RK21_RS15650 PF02559 CarD-like/TRCF domain RK21_RS15660 PF12419 SNF2 Helicase protein RK21_RS15660 PF00271 Helicase conserved C-terminal domain RK21_RS15660 PF00176 SNF2 family N-terminal domain RK21_RS15665 PF00933 Glycosyl hydrolase family 3 N terminal domain RK21_RS15670 PF00933 Glycosyl hydrolase family 3 N terminal domain RK21_RS15675 PF01476 LysM domain RK21_RS15675 PF03734 L,D-transpeptidase catalytic domain RK21_RS15680 PF00440 Bacterial regulatory proteins, tetR family RK21_RS15685 PF01726 LexA DNA binding domain RK21_RS15685 PF00717 Peptidase S24-like RK21_RS15690 PF03846 Cell division inhibitor SulA RK21_RS15705 PF01396 Topoisomerase DNA binding C4 zinc finger RK21_RS15705 PF08272 Topoisomerase I zinc-ribbon-like RK21_RS15705 PF01131 DNA topoisomerase RK21_RS15705 PF01751 Toprim domain RK21_RS15715 PF00108 Thiolase, N-terminal domain RK21_RS15715 PF02803 Thiolase, C-terminal domain RK21_RS15720 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS15720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS15720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS15730 PF00582 Universal stress protein family RK21_RS15735 PF00005 ABC transporter RK21_RS15735 PF12848 ABC transporter RK21_RS15735 PF16326 ABC transporter C-terminal domain RK21_RS15740 PF14718 Soluble lytic murein transglycosylase L domain RK21_RS15740 PF01464 Transglycosylase SLT domain RK21_RS15750 PF00072 Response regulator receiver domain RK21_RS15750 PF01584 CheW-like domain RK21_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS15765 PF07730 Histidine kinase RK21_RS15765 PF05231 MASE1 RK21_RS15770 PF00196 Bacterial regulatory proteins, luxR family RK21_RS15770 PF00072 Response regulator receiver domain RK21_RS15775 PF00781 Diacylglycerol kinase catalytic domain RK21_RS15785 PF03453 MoeA N-terminal region (domain I and II) RK21_RS15785 PF03454 MoeA C-terminal region (domain IV) RK21_RS15785 PF00994 Probable molybdopterin binding domain RK21_RS15790 PF00994 Probable molybdopterin binding domain RK21_RS15805 PF06039 Malate:quinone oxidoreductase (Mqo) RK21_RS15810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS15810 PF00672 HAMP domain RK21_RS15815 PF00005 ABC transporter RK21_RS15815 PF00664 ABC transporter transmembrane region RK21_RS15820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS15820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS15820 PF11890 Domain of unknown function (DUF3410) RK21_RS15825 PF01206 Sulfurtransferase TusA RK21_RS15835 PF18125 RlmM ferredoxin-like domain RK21_RS15835 PF01728 FtsJ-like methyltransferase RK21_RS15840 PF00330 Aconitase family (aconitate hydratase) RK21_RS15840 PF00694 Aconitase C-terminal domain RK21_RS15850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS15850 PF08447 PAS fold RK21_RS15855 PF00849 RNA pseudouridylate synthase RK21_RS15875 PF00909 Ammonium Transporter Family RK21_RS15895 PF01966 HD domain RK21_RS15900 PF00072 Response regulator receiver domain RK21_RS15900 PF00196 Bacterial regulatory proteins, luxR family RK21_RS15905 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS15905 PF01627 Hpt domain RK21_RS15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS15905 PF00072 Response regulator receiver domain RK21_RS15905 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS15905 PF00989 PAS fold RK21_RS15910 PF04320 Protein with unknown function (DUF469) RK21_RS15915 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RK21_RS15920 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS15925 PF01170 Putative RNA methylase family UPF0020 RK21_RS15925 PF02926 THUMP domain RK21_RS15925 PF10672 S-adenosylmethionine-dependent methyltransferase RK21_RS15930 PF01180 Dihydroorotate dehydrogenase RK21_RS15935 PF00005 ABC transporter RK21_RS15940 PF03861 ANTAR domain RK21_RS15940 PF08376 Nitrate and nitrite sensing RK21_RS15945 PF07690 Major Facilitator Superfamily RK21_RS15950 PF00069 Protein kinase domain RK21_RS15955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS15960 PF05736 OprF membrane domain RK21_RS15960 PF00691 OmpA family RK21_RS15970 PF05552 Conserved TM helix RK21_RS15970 PF00924 Mechanosensitive ion channel RK21_RS15980 PF01544 CorA-like Mg2+ transporter protein RK21_RS15985 PF03737 Aldolase/RraA RK21_RS15995 PF00391 PEP-utilising enzyme, mobile domain RK21_RS15995 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RK21_RS15995 PF02896 PEP-utilising enzyme, TIM barrel domain RK21_RS16000 PF03618 Kinase/pyrophosphorylase RK21_RS16005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS16010 PF05088 Bacterial NAD-glutamate dehydrogenase RK21_RS16020 PF03466 LysR substrate binding domain RK21_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RK21_RS16025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RK21_RS16030 PF03466 LysR substrate binding domain RK21_RS16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16035 PF13673 Acetyltransferase (GNAT) domain RK21_RS16040 PF07702 UTRA domain RK21_RS16040 PF00392 Bacterial regulatory proteins, gntR family RK21_RS16045 PF00376 MerR family regulatory protein RK21_RS16045 PF09278 MerR, DNA binding RK21_RS16055 PF07690 Major Facilitator Superfamily RK21_RS16060 PF13533 Biotin-lipoyl like RK21_RS16075 PF00211 Adenylate and Guanylate cyclase catalytic domain RK21_RS16085 PF00108 Thiolase, N-terminal domain RK21_RS16085 PF02803 Thiolase, C-terminal domain RK21_RS16095 PF00465 Iron-containing alcohol dehydrogenase RK21_RS16100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS16100 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS16100 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS16100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS16105 PF00378 Enoyl-CoA hydratase/isomerase RK21_RS16105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS16105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS16110 PF03466 LysR substrate binding domain RK21_RS16110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16115 PF00753 Metallo-beta-lactamase superfamily RK21_RS16115 PF14863 Alkyl sulfatase dimerisation RK21_RS16115 PF14864 Alkyl sulfatase C-terminal RK21_RS16125 PF02656 Domain of unknown function (DUF202) RK21_RS16130 PF07044 Protein of unknown function (DUF1329) RK21_RS16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16140 PF03466 LysR substrate binding domain RK21_RS16150 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS16150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS16150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS16155 PF00501 AMP-binding enzyme RK21_RS16155 PF13193 AMP-binding enzyme C-terminal domain RK21_RS16160 PF00596 Class II Aldolase and Adducin N-terminal domain RK21_RS16165 PF00701 Dihydrodipicolinate synthetase family RK21_RS16170 PF00392 Bacterial regulatory proteins, gntR family RK21_RS16170 PF00155 Aminotransferase class I and II RK21_RS16175 PF03594 Benzoate membrane transport protein RK21_RS16190 PF17863 AAA lid domain RK21_RS16190 PF07726 ATPase family associated with various cellular activities (AAA) RK21_RS16195 PF01882 Protein of unknown function DUF58 RK21_RS16225 PF10947 Protein of unknown function (DUF2628) RK21_RS16265 PF03527 RHS protein RK21_RS16265 PF05593 RHS Repeat RK21_RS16270 PF00149 Calcineurin-like phosphoesterase RK21_RS16270 PF12320 Type 5 capsule protein repressor C-terminal domain RK21_RS16290 PF10282 Lactonase, 7-bladed beta-propeller RK21_RS16305 PF14870 Photosynthesis system II assembly factor YCF48 RK21_RS16310 PF01433 Peptidase family M1 domain RK21_RS16310 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RK21_RS16310 PF11940 Domain of unknown function (DUF3458) Ig-like fold RK21_RS16320 PF07023 Protein of unknown function (DUF1315) RK21_RS16325 PF01694 Rhomboid family RK21_RS16325 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease RK21_RS16330 PF00149 Calcineurin-like phosphoesterase RK21_RS16335 PF01513 ATP-NAD kinase RK21_RS16345 PF01292 Prokaryotic cytochrome b561 RK21_RS16355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS16355 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS16365 PF12833 Helix-turn-helix domain RK21_RS16365 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RK21_RS16370 PF00392 Bacterial regulatory proteins, gntR family RK21_RS16370 PF00155 Aminotransferase class I and II RK21_RS16375 PF00892 EamA-like transporter family RK21_RS16410 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS16415 PF00156 Phosphoribosyl transferase domain RK21_RS16420 PF02674 Colicin V production protein RK21_RS16430 PF08245 Mur ligase middle domain RK21_RS16430 PF02875 Mur ligase family, glutamate ligase domain RK21_RS16435 PF01039 Carboxyl transferase domain RK21_RS16435 PF17848 Acetyl-coA carboxylase zinc finger domain RK21_RS16440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RK21_RS16445 PF01416 tRNA pseudouridine synthase RK21_RS16455 PF01118 Semialdehyde dehydrogenase, NAD binding domain RK21_RS16455 PF02774 Semialdehyde dehydrogenase, dimerisation domain RK21_RS16465 PF02774 Semialdehyde dehydrogenase, dimerisation domain RK21_RS16465 PF01118 Semialdehyde dehydrogenase, NAD binding domain RK21_RS16470 PF00180 Isocitrate/isopropylmalate dehydrogenase RK21_RS16475 PF08241 Methyltransferase domain RK21_RS16480 PF00694 Aconitase C-terminal domain RK21_RS16485 PF00330 Aconitase family (aconitate hydratase) RK21_RS16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16495 PF00563 EAL domain RK21_RS16495 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS16495 PF03707 Bacterial signalling protein N terminal repeat RK21_RS16500 PF00011 Hsp20/alpha crystallin family RK21_RS16505 PF01207 Dihydrouridine synthase (Dus) RK21_RS16560 PF00749 tRNA synthetases class I (E and Q), catalytic domain RK21_RS16565 PF13533 Biotin-lipoyl like RK21_RS16570 PF07690 Major Facilitator Superfamily RK21_RS16575 PF00271 Helicase conserved C-terminal domain RK21_RS16575 PF17757 UvrB interaction domain RK21_RS16575 PF12344 Ultra-violet resistance protein B RK21_RS16575 PF04851 Type III restriction enzyme, res subunit RK21_RS16575 PF02151 UvrB/uvrC motif RK21_RS16580 PF00155 Aminotransferase class I and II RK21_RS16610 PF06463 Molybdenum Cofactor Synthesis C RK21_RS16610 PF04055 Radical SAM superfamily RK21_RS16615 PF00440 Bacterial regulatory proteins, tetR family RK21_RS16620 PF01026 TatD related DNase RK21_RS16625 PF09115 DNA polymerase III, delta subunit, C terminal RK21_RS16630 PF02223 Thymidylate kinase RK21_RS16635 PF02618 YceG-like family RK21_RS16640 PF01063 Amino-transferase class IV RK21_RS16645 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS16645 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS16650 PF00550 Phosphopantetheine attachment site RK21_RS16660 PF00698 Acyl transferase domain RK21_RS16665 PF02504 Fatty acid synthesis protein RK21_RS16670 PF01783 Ribosomal L32p protein family RK21_RS16680 PF02545 Maf-like protein RK21_RS16685 PF06965 Na+/H+ antiporter 1 RK21_RS16685 PF01343 Peptidase family S49 RK21_RS16690 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS16695 PF01479 S4 domain RK21_RS16695 PF00849 RNA pseudouridylate synthase RK21_RS16700 PF10150 Ribonuclease E/G family RK21_RS16700 PF12111 Polyribonucleotide phosphorylase C terminal RK21_RS16700 PF00575 S1 RNA binding domain RK21_RS16705 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RK21_RS16705 PF01565 FAD binding domain RK21_RS16710 PF01451 Low molecular weight phosphotyrosine protein phosphatase RK21_RS16715 PF02348 Cytidylyltransferase RK21_RS16720 PF03966 Trm112p-like protein RK21_RS16725 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RK21_RS16730 PF02472 Biopolymer transport protein ExbD/TolR RK21_RS16735 PF01618 MotA/TolQ/ExbB proton channel family RK21_RS16740 PF00753 Metallo-beta-lactamase superfamily RK21_RS16740 PF03772 Competence protein RK21_RS16745 PF01061 ABC-2 type transporter RK21_RS16750 PF00005 ABC transporter RK21_RS16755 PF00043 Glutathione S-transferase, C-terminal domain RK21_RS16755 PF13417 Glutathione S-transferase, N-terminal domain RK21_RS16760 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS16760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS16760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS16760 PF09317 Domain of unknown function (DUF1974) RK21_RS16775 PF02753 Pili assembly chaperone PapD, C-terminal domain RK21_RS16775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain RK21_RS16795 PF00872 Transposase, Mutator family RK21_RS16800 PF13953 PapC C-terminal domain RK21_RS16800 PF00577 Outer membrane usher protein RK21_RS16800 PF13954 PapC N-terminal domain RK21_RS16840 PF13185 GAF domain RK21_RS16850 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS16850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS16850 PF00072 Response regulator receiver domain RK21_RS16850 PF01627 Hpt domain RK21_RS16850 PF00672 HAMP domain RK21_RS16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS16855 PF00255 Glutathione peroxidase RK21_RS16860 PF01641 SelR domain RK21_RS16865 PF00155 Aminotransferase class I and II RK21_RS16870 PF01435 Peptidase family M48 RK21_RS16875 PF05724 Thiopurine S-methyltransferase (TPMT) RK21_RS16880 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase RK21_RS16885 PF00270 DEAD/DEAH box helicase RK21_RS16885 PF03880 DbpA RNA binding domain RK21_RS16885 PF00271 Helicase conserved C-terminal domain RK21_RS16895 PF01474 Class-II DAHP synthetase family RK21_RS16905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16905 PF03466 LysR substrate binding domain RK21_RS16915 PF03466 LysR substrate binding domain RK21_RS16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16920 PF01047 MarR family RK21_RS16925 PF02566 OsmC-like protein RK21_RS16930 PF01609 Transposase DDE domain RK21_RS16930 PF13006 Insertion element 4 transposase N-terminal RK21_RS16935 PF09285 Elongation factor P, C-terminal RK21_RS16935 PF08207 Elongation factor P (EF-P) KOW-like domain RK21_RS16935 PF01132 Elongation factor P (EF-P) OB domain RK21_RS16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS16955 PF03466 LysR substrate binding domain RK21_RS16965 PF07690 Major Facilitator Superfamily RK21_RS16975 PF07715 TonB-dependent Receptor Plug Domain RK21_RS16975 PF00593 TonB dependent receptor RK21_RS16990 PF01553 Acyltransferase RK21_RS16995 PF01544 CorA-like Mg2+ transporter protein RK21_RS17000 PF00117 Glutamine amidotransferase class-I RK21_RS17000 PF00958 GMP synthase C terminal domain RK21_RS17000 PF02540 NAD synthase RK21_RS17020 PF00884 Sulfatase RK21_RS17030 PF02535 ZIP Zinc transporter RK21_RS17040 PF12796 Ankyrin repeats (3 copies) RK21_RS17040 PF00023 Ankyrin repeat RK21_RS17050 PF03079 ARD/ARD' family RK21_RS17055 PF12832 MFS_1 like family RK21_RS17060 PF01264 Chorismate synthase RK21_RS17075 PF05175 Methyltransferase small domain RK21_RS17090 PF01713 Smr domain RK21_RS17095 PF01227 GTP cyclohydrolase I RK21_RS17105 PF02798 Glutathione S-transferase, N-terminal domain RK21_RS17110 PF03594 Benzoate membrane transport protein RK21_RS17115 PF00672 HAMP domain RK21_RS17115 PF16591 Helical bimodular sensor domain RK21_RS17115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS17125 PF16884 N-terminal domain of oxidoreductase RK21_RS17125 PF00107 Zinc-binding dehydrogenase RK21_RS17140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RK21_RS17150 PF02350 UDP-N-acetylglucosamine 2-epimerase RK21_RS17155 PF00342 Phosphoglucose isomerase RK21_RS17160 PF00665 Integrase core domain RK21_RS17165 PF01527 Transposase RK21_RS17175 PF02719 Polysaccharide biosynthesis protein RK21_RS17180 PF00953 Glycosyl transferase family 4 RK21_RS17185 PF01370 NAD dependent epimerase/dehydratase family RK21_RS17190 PF02321 Outer membrane efflux protein RK21_RS17200 PF00005 ABC transporter RK21_RS17200 PF00664 ABC transporter transmembrane region RK21_RS17220 PF00535 Glycosyl transferase family 2 RK21_RS17250 PF05717 IS66 Orf2 like protein RK21_RS17260 PF01757 Acyltransferase family RK21_RS17265 PF05045 Rhamnan synthesis protein F RK21_RS17265 PF14307 Glycosyltransferase WbsX RK21_RS17275 PF16363 GDP-mannose 4,6 dehydratase RK21_RS17280 PF16363 GDP-mannose 4,6 dehydratase RK21_RS17285 PF16363 GDP-mannose 4,6 dehydratase RK21_RS17290 PF04321 RmlD substrate binding domain RK21_RS17295 PF00483 Nucleotidyl transferase RK21_RS17300 PF00535 Glycosyl transferase family 2 RK21_RS17315 PF00005 ABC transporter RK21_RS17325 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RK21_RS17330 PF00535 Glycosyl transferase family 2 RK21_RS17335 PF01050 Mannose-6-phosphate isomerase RK21_RS17335 PF00483 Nucleotidyl transferase RK21_RS17340 PF10996 Beta-Casp domain RK21_RS17340 PF00753 Metallo-beta-lactamase superfamily RK21_RS17340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RK21_RS17350 PF00216 Bacterial DNA-binding protein RK21_RS17355 PF13333 Integrase core domain RK21_RS17355 PF13276 HTH-like domain RK21_RS17355 PF00665 Integrase core domain RK21_RS17360 PF01527 Transposase RK21_RS17375 PF01609 Transposase DDE domain RK21_RS17375 PF13006 Insertion element 4 transposase N-terminal RK21_RS17380 PF00575 S1 RNA binding domain RK21_RS17385 PF02224 Cytidylate kinase RK21_RS17390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RK21_RS17395 PF01817 Chorismate mutase type II RK21_RS17395 PF01842 ACT domain RK21_RS17395 PF00800 Prephenate dehydratase RK21_RS17400 PF00266 Aminotransferase class-V RK21_RS17405 PF03989 DNA gyrase C-terminal domain, beta-propeller RK21_RS17405 PF00521 DNA gyrase/topoisomerase IV, subunit A RK21_RS17410 PF01008 Initiation factor 2 subunit family RK21_RS17420 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS17425 PF00106 short chain dehydrogenase RK21_RS17435 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS17435 PF00563 EAL domain RK21_RS17435 PF08448 PAS fold RK21_RS17440 PF00664 ABC transporter transmembrane region RK21_RS17440 PF00005 ABC transporter RK21_RS17450 PF00581 Rhodanese-like domain RK21_RS17450 PF17773 UPF0176 acylphosphatase like domain RK21_RS17455 PF01722 BolA-like protein RK21_RS17465 PF00206 Lyase RK21_RS17465 PF10415 Fumarase C C-terminus RK21_RS17470 PF00892 EamA-like transporter family RK21_RS17475 PF03976 Polyphosphate kinase 2 (PPK2) RK21_RS17480 PF01266 FAD dependent oxidoreductase RK21_RS17480 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RK21_RS17485 PF00733 Asparagine synthase RK21_RS17485 PF13537 Glutamine amidotransferase domain RK21_RS17490 PF08245 Mur ligase middle domain RK21_RS17490 PF02875 Mur ligase family, glutamate ligase domain RK21_RS17490 PF08443 RimK-like ATP-grasp domain RK21_RS17495 PF05343 M42 glutamyl aminopeptidase RK21_RS17500 PF06794 Uncharacterised protein family (UPF0270) RK21_RS17505 PF02599 Global regulator protein family RK21_RS17510 PF00106 short chain dehydrogenase RK21_RS17510 PF00561 alpha/beta hydrolase fold RK21_RS17520 PF00474 Sodium:solute symporter family RK21_RS17525 PF04341 Protein of unknown function, DUF485 RK21_RS17530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RK21_RS17545 PF00665 Integrase core domain RK21_RS17545 PF13333 Integrase core domain RK21_RS17545 PF13276 HTH-like domain RK21_RS17560 PF04333 MlaA lipoprotein RK21_RS17570 PF03279 Bacterial lipid A biosynthesis acyltransferase RK21_RS17575 PF03775 Septum formation inhibitor MinC, C-terminal domain RK21_RS17575 PF05209 Septum formation inhibitor MinC, N-terminal domain RK21_RS17580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RK21_RS17585 PF03776 Septum formation topological specificity factor MinE RK21_RS17590 PF00849 RNA pseudouridylate synthase RK21_RS17595 PF02127 Aminopeptidase I zinc metalloprotease (M18) RK21_RS17600 PF00924 Mechanosensitive ion channel RK21_RS17605 PF07702 UTRA domain RK21_RS17605 PF00392 Bacterial regulatory proteins, gntR family RK21_RS17620 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS17630 PF08402 TOBE domain RK21_RS17630 PF00005 ABC transporter RK21_RS17640 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS17640 PF08990 Erythronolide synthase docking RK21_RS17640 PF00698 Acyl transferase domain RK21_RS17640 PF09277 Erythronolide synthase, docking RK21_RS17640 PF16197 Ketoacyl-synthetase C-terminal extension RK21_RS17640 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS17640 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS17640 PF08659 KR domain RK21_RS17640 PF14765 Polyketide synthase dehydratase RK21_RS17640 PF00550 Phosphopantetheine attachment site RK21_RS17645 PF17804 Tail specific protease N-terminal domain RK21_RS17645 PF03572 Peptidase family S41 RK21_RS17645 PF00595 PDZ domain RK21_RS17645 PF11818 C-terminal domain of tail specific protease (DUF3340) RK21_RS17650 PF13188 PAS domain RK21_RS17650 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS17650 PF03707 Bacterial signalling protein N terminal repeat RK21_RS17650 PF00563 EAL domain RK21_RS17665 PF06803 Protein of unknown function (DUF1232) RK21_RS17670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS17670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RK21_RS17680 PF03466 LysR substrate binding domain RK21_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS17685 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS17685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RK21_RS17685 PF13806 Rieske-like [2Fe-2S] domain RK21_RS17685 PF18267 Rubredoxin NAD+ reductase C-terminal domain RK21_RS17685 PF04324 BFD-like [2Fe-2S] binding domain RK21_RS17685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RK21_RS17690 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS17690 PF04324 BFD-like [2Fe-2S] binding domain RK21_RS17690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RK21_RS17690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RK21_RS17690 PF18267 Rubredoxin NAD+ reductase C-terminal domain RK21_RS17690 PF13806 Rieske-like [2Fe-2S] domain RK21_RS17695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS17695 PF01568 Molydopterin dinucleotide binding domain RK21_RS17695 PF00384 Molybdopterin oxidoreductase RK21_RS17700 PF00557 Metallopeptidase family M24 RK21_RS17725 PF04381 Putative exonuclease, RdgC RK21_RS17730 PF01758 Sodium Bile acid symporter family RK21_RS17735 PF00893 Small Multidrug Resistance protein RK21_RS17740 PF07690 Major Facilitator Superfamily RK21_RS17745 PF07690 Major Facilitator Superfamily RK21_RS17750 PF00672 HAMP domain RK21_RS17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS17750 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS17755 PF02646 RmuC family RK21_RS17775 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) RK21_RS17780 PF03466 LysR substrate binding domain RK21_RS17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS17790 PF00255 Glutathione peroxidase RK21_RS17800 PF01047 MarR family RK21_RS17810 PF02654 Cobalamin-5-phosphate synthase RK21_RS17815 PF00300 Histidine phosphatase superfamily (branch 1) RK21_RS17820 PF02277 Phosphoribosyltransferase RK21_RS17825 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RK21_RS17830 PF07685 CobB/CobQ-like glutamine amidotransferase domain RK21_RS17830 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RK21_RS17835 PF00155 Aminotransferase class I and II RK21_RS17840 PF17113 Regulatory signalling modulator protein AmpE RK21_RS17840 PF03186 CobD/Cbib protein RK21_RS17845 PF00881 Nitroreductase family RK21_RS17850 PF07685 CobB/CobQ-like glutamine amidotransferase domain RK21_RS17850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RK21_RS17855 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RK21_RS17855 PF12557 Cob(I)alamin adenosyltransferase N terminal RK21_RS17870 PF01527 Transposase RK21_RS17875 PF00665 Integrase core domain RK21_RS17885 PF07995 Glucose / Sorbosone dehydrogenase RK21_RS17890 PF00877 NlpC/P60 family RK21_RS17895 PF00877 NlpC/P60 family RK21_RS17900 PF00308 Bacterial dnaA protein RK21_RS17905 PF01594 AI-2E family transporter RK21_RS17915 PF00586 AIR synthase related protein, N-terminal domain RK21_RS17915 PF02769 AIR synthase related protein, C-terminal domain RK21_RS17920 PF00551 Formyl transferase RK21_RS17935 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) RK21_RS17940 PF03819 MazG nucleotide pyrophosphohydrolase domain RK21_RS17945 PF02824 TGS domain RK21_RS17945 PF04607 Region found in RelA / SpoT proteins RK21_RS17945 PF13291 ACT domain RK21_RS17950 PF05958 tRNA (Uracil-5-)-methyltransferase RK21_RS17950 PF01938 TRAM domain RK21_RS17955 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS17960 PF16750 Sensor domain of 2-component histidine kinase RK21_RS17960 PF00672 HAMP domain RK21_RS17960 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS17965 PF00072 Response regulator receiver domain RK21_RS17965 PF00486 Transcriptional regulatory protein, C terminal RK21_RS17970 PF00672 HAMP domain RK21_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS17970 PF00072 Response regulator receiver domain RK21_RS17970 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS17970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS17970 PF01627 Hpt domain RK21_RS17975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS17975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS17990 PF00085 Thioredoxin RK21_RS17995 PF03960 ArsC family RK21_RS18000 PF03358 NADPH-dependent FMN reductase RK21_RS18015 PF01171 PP-loop family RK21_RS18020 PF04893 Yip1 domain RK21_RS18025 PF10263 SprT-like family RK21_RS18030 PF00175 Oxidoreductase NAD-binding domain RK21_RS18030 PF00970 Oxidoreductase FAD-binding domain RK21_RS18035 PF03466 LysR substrate binding domain RK21_RS18035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS18040 PF01219 Prokaryotic diacylglycerol kinase RK21_RS18045 PF00072 Response regulator receiver domain RK21_RS18045 PF00196 Bacterial regulatory proteins, luxR family RK21_RS18050 PF03942 DTW domain RK21_RS18070 PF02631 RecX family RK21_RS18075 PF00154 recA bacterial DNA recombination protein RK21_RS18080 PF02464 Competence-damaged protein RK21_RS18085 PF01624 MutS domain I RK21_RS18085 PF00488 MutS domain V RK21_RS18085 PF05190 MutS family domain IV RK21_RS18085 PF05188 MutS domain II RK21_RS18085 PF05192 MutS domain III RK21_RS18090 PF00037 4Fe-4S binding domain RK21_RS18090 PF11953 Domain of unknown function (DUF3470) RK21_RS18095 PF04539 Sigma-70 region 3 RK21_RS18095 PF04542 Sigma-70 region 2 RK21_RS18095 PF00140 Sigma-70 factor, region 1.2 RK21_RS18095 PF04545 Sigma-70, region 4 RK21_RS18100 PF01476 LysM domain RK21_RS18100 PF01551 Peptidase family M23 RK21_RS18110 PF01975 Survival protein SurE RK21_RS18115 PF01142 tRNA pseudouridine synthase D (TruD) RK21_RS18120 PF02542 YgbB family RK21_RS18125 PF00756 Putative esterase RK21_RS18130 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS18130 PF00107 Zinc-binding dehydrogenase RK21_RS18135 PF03466 LysR substrate binding domain RK21_RS18135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS18140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RK21_RS18145 PF04977 Septum formation initiator RK21_RS18150 PF03952 Enolase, N-terminal domain RK21_RS18150 PF00113 Enolase, C-terminal TIM barrel domain RK21_RS18155 PF00793 DAHP synthetase I family RK21_RS18160 PF00117 Glutamine amidotransferase class-I RK21_RS18160 PF06418 CTP synthase N-terminus RK21_RS18165 PF11734 TilS substrate C-terminal domain RK21_RS18165 PF09179 TilS substrate binding domain RK21_RS18165 PF01171 PP-loop family RK21_RS18170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RK21_RS18175 PF07733 Bacterial DNA polymerase III alpha NTPase domain RK21_RS18175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RK21_RS18175 PF14579 Helix-hairpin-helix motif RK21_RS18175 PF02811 PHP domain RK21_RS18175 PF01336 OB-fold nucleic acid binding domain RK21_RS18180 PF01351 Ribonuclease HII RK21_RS18185 PF02684 Lipid-A-disaccharide synthetase RK21_RS18190 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RK21_RS18190 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS18195 PF07977 FabA-like domain RK21_RS18200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RK21_RS18200 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS18205 PF03938 Outer membrane protein (OmpH-like) RK21_RS18210 PF07244 Surface antigen variable number repeat RK21_RS18210 PF01103 Surface antigen RK21_RS18215 PF02163 Peptidase family M50 RK21_RS18215 PF17820 PDZ domain RK21_RS18215 PF13180 PDZ domain RK21_RS18220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RK21_RS18220 PF13288 DXP reductoisomerase C-terminal domain RK21_RS18220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RK21_RS18230 PF01255 Putative undecaprenyl diphosphate synthase RK21_RS18235 PF01765 Ribosome recycling factor RK21_RS18240 PF00696 Amino acid kinase family RK21_RS18245 PF00889 Elongation factor TS RK21_RS18250 PF00318 Ribosomal protein S2 RK21_RS18255 PF00557 Metallopeptidase family M24 RK21_RS18260 PF01909 Nucleotidyltransferase domain RK21_RS18260 PF01966 HD domain RK21_RS18260 PF08335 GlnD PII-uridylyltransferase RK21_RS18260 PF01842 ACT domain RK21_RS18265 PF00155 Aminotransferase class I and II RK21_RS18270 PF00999 Sodium/hydrogen exchanger family RK21_RS18280 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system RK21_RS18285 PF01381 Helix-turn-helix RK21_RS18290 PF03960 ArsC family RK21_RS18295 PF14602 Hexapeptide repeat of succinyl-transferase RK21_RS18295 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RK21_RS18300 PF00266 Aminotransferase class-V RK21_RS18305 PF02657 Fe-S metabolism associated domain RK21_RS18310 PF00899 ThiF family RK21_RS18315 PF00535 Glycosyl transferase family 2 RK21_RS18315 PF03552 Cellulose synthase RK21_RS18315 PF07238 PilZ domain RK21_RS18320 PF01546 Peptidase family M20/M25/M40 RK21_RS18320 PF07687 Peptidase dimerisation domain RK21_RS18325 PF13847 Methyltransferase domain RK21_RS18335 PF00313 'Cold-shock' DNA-binding domain RK21_RS18340 PF01553 Acyltransferase RK21_RS18365 PF00873 AcrB/AcrD/AcrF family RK21_RS18370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS18380 PF04445 Putative SAM-dependent methyltransferase RK21_RS18410 PF00814 Glycoprotease family RK21_RS18415 PF05191 Adenylate kinase, active site lid RK21_RS18420 PF00311 Phosphoenolpyruvate carboxylase RK21_RS18435 PF00691 OmpA family RK21_RS18435 PF13488 Glycine zipper RK21_RS18445 PF12146 Serine aminopeptidase, S33 RK21_RS18465 PF01336 OB-fold nucleic acid binding domain RK21_RS18465 PF00152 tRNA synthetases class II (D, K and N) RK21_RS18470 PF00472 RF-1 domain RK21_RS18470 PF03462 PCRF domain RK21_RS18475 PF00563 EAL domain RK21_RS18475 PF01590 GAF domain RK21_RS18475 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS18475 PF00360 Phytochrome region RK21_RS18480 PF00072 Response regulator receiver domain RK21_RS18480 PF01339 CheB methylesterase RK21_RS18485 PF01627 Hpt domain RK21_RS18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS18485 PF00072 Response regulator receiver domain RK21_RS18485 PF01584 CheW-like domain RK21_RS18495 PF01739 CheR methyltransferase, SAM binding domain RK21_RS18505 PF12729 Four helix bundle sensory module for signal transduction RK21_RS18505 PF00672 HAMP domain RK21_RS18505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS18510 PF04391 Protein of unknown function (DUF533) RK21_RS18515 PF13416 Bacterial extracellular solute-binding protein RK21_RS18520 PF08402 TOBE domain RK21_RS18520 PF00005 ABC transporter RK21_RS18525 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS18530 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS18535 PF00171 Aldehyde dehydrogenase family RK21_RS18545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS18555 PF02272 DHHA1 domain RK21_RS18555 PF01368 DHH family RK21_RS18555 PF17768 RecJ OB domain RK21_RS18560 PF07152 YaeQ protein RK21_RS18565 PF02515 CoA-transferase family III RK21_RS18585 PF14821 Threonine synthase N terminus RK21_RS18585 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS18590 PF00742 Homoserine dehydrogenase RK21_RS18590 PF03447 Homoserine dehydrogenase, NAD binding domain RK21_RS18590 PF01842 ACT domain RK21_RS18595 PF13098 Thioredoxin-like domain RK21_RS18595 PF10411 Disulfide bond isomerase protein N-terminus RK21_RS18600 PF02899 Phage integrase, N-terminal SAM-like domain RK21_RS18600 PF00589 Phage integrase family RK21_RS18605 PF03061 Thioesterase superfamily RK21_RS18610 PF01245 Ribosomal protein L19 RK21_RS18615 PF01746 tRNA (Guanine-1)-methyltransferase RK21_RS18620 PF05239 PRC-barrel domain RK21_RS18620 PF01782 RimM N-terminal domain RK21_RS18625 PF00886 Ribosomal protein S16 RK21_RS18630 PF00448 SRP54-type protein, GTPase domain RK21_RS18630 PF02881 SRP54-type protein, helical bundle domain RK21_RS18630 PF02978 Signal peptide binding domain RK21_RS18640 PF03471 Transporter associated domain RK21_RS18640 PF01595 Cyclin M transmembrane N-terminal domain RK21_RS18640 PF00571 CBS domain RK21_RS18645 PF07690 Major Facilitator Superfamily RK21_RS18645 PF00083 Sugar (and other) transporter RK21_RS18650 PF01370 NAD dependent epimerase/dehydratase family RK21_RS18650 PF02222 ATP-grasp domain RK21_RS18665 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS18670 PF00293 NUDIX domain RK21_RS18675 PF00293 NUDIX domain RK21_RS18675 PF09297 NADH pyrophosphatase zinc ribbon domain RK21_RS18685 PF08479 POTRA domain, ShlB-type RK21_RS18685 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RK21_RS18685 PF17287 POTRA domain RK21_RS18690 PF13332 Hemagglutinin repeat RK21_RS18690 PF05860 haemagglutination activity domain RK21_RS18715 PF02501 Type II secretion system (T2SS), protein I RK21_RS18715 PF07963 Prokaryotic N-terminal methylation motif RK21_RS18720 PF07963 Prokaryotic N-terminal methylation motif RK21_RS18725 PF08334 Type II secretion system (T2SS), protein G RK21_RS18725 PF07963 Prokaryotic N-terminal methylation motif RK21_RS18730 PF00482 Type II secretion system (T2SS), protein F RK21_RS18735 PF00437 Type II/IV secretion system protein RK21_RS18740 PF00263 Bacterial type II and III secretion system protein RK21_RS18740 PF03958 Bacterial type II/III secretion system short domain RK21_RS18760 PF03934 Type II secretion system (T2SS), protein K RK21_RS18765 PF02416 mttA/Hcf106 family RK21_RS18770 PF02416 mttA/Hcf106 family RK21_RS18775 PF00902 Sec-independent protein translocase protein (TatC) RK21_RS18780 PF01784 NIF3 (NGG1p interacting factor 3) RK21_RS18785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RK21_RS18785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal RK21_RS18785 PF02769 AIR synthase related protein, C-terminal domain RK21_RS18790 PF01464 Transglycosylase SLT domain RK21_RS18790 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS18795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RK21_RS18800 PF07731 Multicopper oxidase RK21_RS18800 PF07732 Multicopper oxidase RK21_RS18800 PF00394 Multicopper oxidase RK21_RS18805 PF01129 NAD:arginine ADP-ribosyltransferase RK21_RS18810 PF03747 ADP-ribosylglycohydrolase RK21_RS18840 PF02540 NAD synthase RK21_RS18840 PF00117 Glutamine amidotransferase class-I RK21_RS18840 PF00958 GMP synthase C terminal domain RK21_RS18845 PF00478 IMP dehydrogenase / GMP reductase domain RK21_RS18845 PF00571 CBS domain RK21_RS18860 PF03466 LysR substrate binding domain RK21_RS18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS18865 PF02601 Exonuclease VII, large subunit RK21_RS18865 PF13742 OB-fold nucleic acid binding domain RK21_RS18870 PF01551 Peptidase family M23 RK21_RS18870 PF08525 Opacity-associated protein A N-terminal motif RK21_RS18870 PF01476 LysM domain RK21_RS18875 PF08502 LeuA allosteric (dimerisation) domain RK21_RS18875 PF00682 HMGL-like RK21_RS18880 PF01081 KDPG and KHG aldolase RK21_RS18885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RK21_RS18890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RK21_RS18890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RK21_RS18895 PF01418 Helix-turn-helix domain, rpiR family RK21_RS18895 PF01380 SIS domain RK21_RS18900 PF01263 Aldose 1-epimerase RK21_RS18905 PF04966 Carbohydrate-selective porin, OprB family RK21_RS18910 PF03459 TOBE domain RK21_RS18910 PF17912 MalK OB fold domain RK21_RS18910 PF00005 ABC transporter RK21_RS18915 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS18925 PF01547 Bacterial extracellular solute-binding protein RK21_RS18935 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS18935 PF00672 HAMP domain RK21_RS18940 PF00486 Transcriptional regulatory protein, C terminal RK21_RS18940 PF00072 Response regulator receiver domain RK21_RS18945 PF02685 Glucokinase RK21_RS18950 PF00920 Dehydratase family RK21_RS18955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RK21_RS18955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK21_RS18960 PF08281 Sigma-70, region 4 RK21_RS18960 PF04542 Sigma-70 region 2 RK21_RS18970 PF07715 TonB-dependent Receptor Plug Domain RK21_RS18970 PF00593 TonB dependent receptor RK21_RS18975 PF01126 Heme oxygenase RK21_RS18980 PF04304 Protein of unknown function (DUF454) RK21_RS18985 PF13520 Amino acid permease RK21_RS18990 PF13520 Amino acid permease RK21_RS19000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RK21_RS19000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RK21_RS19005 PF00696 Amino acid kinase family RK21_RS19015 PF00158 Sigma-54 interaction domain RK21_RS19015 PF18024 Helix-turn-helix domain RK21_RS19020 PF03616 Sodium/glutamate symporter RK21_RS19025 PF03466 LysR substrate binding domain RK21_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS19045 PF01597 Glycine cleavage H-protein RK21_RS19050 PF02347 Glycine cleavage system P-protein RK21_RS19055 PF03315 Serine dehydratase beta chain RK21_RS19055 PF03313 Serine dehydratase alpha chain RK21_RS19060 PF01571 Aminomethyltransferase folate-binding domain RK21_RS19060 PF08669 Glycine cleavage T-protein C-terminal barrel domain RK21_RS19065 PF00313 'Cold-shock' DNA-binding domain RK21_RS19075 PF03739 Lipopolysaccharide export system permease LptF/LptG RK21_RS19080 PF03739 Lipopolysaccharide export system permease LptF/LptG RK21_RS19090 PF00883 Cytosol aminopeptidase family, catalytic domain RK21_RS19090 PF02789 Cytosol aminopeptidase family, N-terminal domain RK21_RS19095 PF04364 DNA polymerase III chi subunit, HolC RK21_RS19105 PF10458 Valyl tRNA synthetase tRNA binding arm RK21_RS19105 PF00133 tRNA synthetases class I (I, L, M and V) RK21_RS19105 PF08264 Anticodon-binding domain of tRNA RK21_RS19110 PF05971 RNA methyltransferase RK21_RS19115 PF00216 Bacterial DNA-binding protein RK21_RS19120 PF04245 37-kD nucleoid-associated bacterial protein RK21_RS19125 PF01541 GIY-YIG catalytic domain RK21_RS19135 PF07690 Major Facilitator Superfamily RK21_RS19140 PF00392 Bacterial regulatory proteins, gntR family RK21_RS19140 PF07729 FCD domain RK21_RS19145 PF00155 Aminotransferase class I and II RK21_RS19150 PF00815 Histidinol dehydrogenase RK21_RS19155 PF01634 ATP phosphoribosyltransferase RK21_RS19160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RK21_RS19175 PF05494 MlaC protein RK21_RS19180 PF02470 MlaD protein RK21_RS19185 PF02405 Permease MlaE RK21_RS19190 PF00005 ABC transporter RK21_RS19195 PF01380 SIS domain RK21_RS19195 PF00571 CBS domain RK21_RS19210 PF03968 OstA-like protein RK21_RS19215 PF12399 Branched-chain amino acid ATP-binding cassette transporter RK21_RS19215 PF00005 ABC transporter RK21_RS19220 PF00309 Sigma-54 factor, Activator interacting domain (AID) RK21_RS19220 PF04963 Sigma-54 factor, core binding domain RK21_RS19220 PF04552 Sigma-54, DNA binding domain RK21_RS19225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RK21_RS19230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RK21_RS19235 PF03668 P-loop ATPase protein family RK21_RS19240 PF00381 PTS HPr component phosphorylation site RK21_RS19245 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RK21_RS19245 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RK21_RS19250 PF00206 Lyase RK21_RS19250 PF10415 Fumarase C C-terminus RK21_RS19260 PF01523 Putative modulator of DNA gyrase RK21_RS19265 PF04751 Protein of unknown function (DUF615) RK21_RS19270 PF01523 Putative modulator of DNA gyrase RK21_RS19275 PF00795 Carbon-nitrogen hydrolase RK21_RS19285 PF10150 Ribonuclease E/G family RK21_RS19285 PF00575 S1 RNA binding domain RK21_RS19290 PF02545 Maf-like protein RK21_RS19300 PF04085 rod shape-determining protein MreC RK21_RS19310 PF02686 Glu-tRNAGln amidotransferase C subunit RK21_RS19315 PF01425 Amidase RK21_RS19320 PF02637 GatB domain RK21_RS19320 PF02934 GatB/GatE catalytic domain RK21_RS19325 PF03330 Lytic transglycolase RK21_RS19330 PF01699 Sodium/calcium exchanger protein RK21_RS19335 PF02627 Carboxymuconolactone decarboxylase family RK21_RS19340 PF00324 Amino acid permease RK21_RS19350 PF02954 Bacterial regulatory protein, Fis family RK21_RS19350 PF00072 Response regulator receiver domain RK21_RS19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS19355 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS19365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS19370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS19375 PF03573 outer membrane porin, OprD family RK21_RS19380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS19385 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19390 PF12911 N-terminal TM domain of oligopeptide transport permease C RK21_RS19390 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RK21_RS19395 PF00005 ABC transporter RK21_RS19400 PF00005 ABC transporter RK21_RS19400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RK21_RS19405 PF12833 Helix-turn-helix domain RK21_RS19405 PF02311 AraC-like ligand binding domain RK21_RS19410 PF01266 FAD dependent oxidoreductase RK21_RS19420 PF13416 Bacterial extracellular solute-binding protein RK21_RS19425 PF03144 Elongation factor Tu domain 2 RK21_RS19425 PF00009 Elongation factor Tu GTP binding domain RK21_RS19425 PF16658 Class II release factor RF3, C-terminal domain RK21_RS19430 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RK21_RS19440 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19445 PF00571 CBS domain RK21_RS19445 PF00005 ABC transporter RK21_RS19450 PF07715 TonB-dependent Receptor Plug Domain RK21_RS19450 PF07660 Secretin and TonB N terminus short domain RK21_RS19450 PF00593 TonB dependent receptor RK21_RS19465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RK21_RS19465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RK21_RS19475 PF18331 PKHD-type hydroxylase C-terminal domain RK21_RS19475 PF13640 2OG-Fe(II) oxygenase superfamily RK21_RS19480 PF07715 TonB-dependent Receptor Plug Domain RK21_RS19480 PF00593 TonB dependent receptor RK21_RS19485 PF00175 Oxidoreductase NAD-binding domain RK21_RS19485 PF00667 FAD binding domain RK21_RS19485 PF00258 Flavodoxin RK21_RS19490 PF00795 Carbon-nitrogen hydrolase RK21_RS19495 PF00155 Aminotransferase class I and II RK21_RS19500 PF01926 50S ribosome-binding GTPase RK21_RS19500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RK21_RS19505 PF13360 PQQ-like domain RK21_RS19515 PF13393 Histidyl-tRNA synthetase RK21_RS19515 PF03129 Anticodon binding domain RK21_RS19520 PF04551 GcpE protein RK21_RS19525 PF13464 Domain of unknown function (DUF4115) RK21_RS19535 PF04055 Radical SAM superfamily RK21_RS19540 PF00334 Nucleoside diphosphate kinase RK21_RS19545 PF04384 Iron-sulphur cluster assembly RK21_RS19550 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS19555 PF00012 Hsp70 protein RK21_RS19560 PF07743 HSCB C-terminal oligomerisation domain RK21_RS19560 PF00226 DnaJ domain RK21_RS19565 PF01521 Iron-sulphur cluster biosynthesis RK21_RS19570 PF01592 NifU-like N terminal domain RK21_RS19575 PF00266 Aminotransferase class-V RK21_RS19580 PF02082 Transcriptional regulator RK21_RS19585 PF06426 Serine acetyltransferase, N-terminal RK21_RS19585 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS19590 PF00588 SpoU rRNA Methylase family RK21_RS19595 PF00459 Inositol monophosphatase family RK21_RS19600 PF05433 Glycine zipper 2TM domain RK21_RS19605 PF02355 Protein export membrane protein RK21_RS19605 PF07549 SecD/SecF GG Motif RK21_RS19610 PF13721 SecD export protein N-terminal TM region RK21_RS19610 PF07549 SecD/SecF GG Motif RK21_RS19610 PF02355 Protein export membrane protein RK21_RS19615 PF02699 Preprotein translocase subunit RK21_RS19620 PF01702 Queuine tRNA-ribosyltransferase RK21_RS19625 PF02547 Queuosine biosynthesis protein RK21_RS19635 PF03466 LysR substrate binding domain RK21_RS19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS19640 PF01266 FAD dependent oxidoreductase RK21_RS19650 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS19655 PF01425 Amidase RK21_RS19660 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19665 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19670 PF00005 ABC transporter RK21_RS19690 PF01062 Bestrophin, RFP-TM, chloride channel RK21_RS19695 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19700 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS19705 PF00005 ABC transporter RK21_RS19715 PF00586 AIR synthase related protein, N-terminal domain RK21_RS19715 PF02769 AIR synthase related protein, C-terminal domain RK21_RS19735 PF13302 Acetyltransferase (GNAT) domain RK21_RS19750 PF03692 Putative zinc- or iron-chelating domain RK21_RS19760 PF00155 Aminotransferase class I and II RK21_RS19765 PF01040 UbiA prenyltransferase family RK21_RS19770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RK21_RS19775 PF00510 Cytochrome c oxidase subunit III RK21_RS19780 PF00115 Cytochrome C and Quinol oxidase polypeptide I RK21_RS19785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RK21_RS19785 PF06481 COX Aromatic Rich Motif RK21_RS19790 PF02600 Disulfide bond formation protein DsbB RK21_RS19795 PF00970 Oxidoreductase FAD-binding domain RK21_RS19795 PF00175 Oxidoreductase NAD-binding domain RK21_RS19795 PF00042 Globin RK21_RS19800 PF02954 Bacterial regulatory protein, Fis family RK21_RS19800 PF00158 Sigma-54 interaction domain RK21_RS19805 PF13188 PAS domain RK21_RS19805 PF08448 PAS fold RK21_RS19805 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS19805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS19805 PF00072 Response regulator receiver domain RK21_RS19820 PF13533 Biotin-lipoyl like RK21_RS19825 PF00873 AcrB/AcrD/AcrF family RK21_RS19830 PF00486 Transcriptional regulatory protein, C terminal RK21_RS19830 PF00072 Response regulator receiver domain RK21_RS19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS19835 PF00672 HAMP domain RK21_RS19835 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS19845 PF03573 outer membrane porin, OprD family RK21_RS19850 PF00360 Phytochrome region RK21_RS19850 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS19850 PF00563 EAL domain RK21_RS19850 PF01590 GAF domain RK21_RS19860 PF12843 Putative quorum-sensing-regulated virulence factor RK21_RS19865 PF02378 Phosphotransferase system, EIIC RK21_RS19865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RK21_RS19870 PF00294 pfkB family carbohydrate kinase RK21_RS19875 PF00381 PTS HPr component phosphorylation site RK21_RS19875 PF05524 PEP-utilising enzyme, N-terminal RK21_RS19875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RK21_RS19875 PF00391 PEP-utilising enzyme, mobile domain RK21_RS19875 PF02896 PEP-utilising enzyme, TIM barrel domain RK21_RS19880 PF00356 Bacterial regulatory proteins, lacI family RK21_RS19880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RK21_RS19885 PF01026 TatD related DNase RK21_RS19895 PF01510 N-acetylmuramoyl-L-alanine amidase RK21_RS19905 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RK21_RS19905 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RK21_RS19910 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS19930 PF13426 PAS domain RK21_RS19930 PF08447 PAS fold RK21_RS19930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS19935 PF13439 Glycosyltransferase Family 4 RK21_RS19935 PF00534 Glycosyl transferases group 1 RK21_RS19940 PF00255 Glutathione peroxidase RK21_RS19945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS19955 PF07085 DRTGG domain RK21_RS19955 PF01515 Phosphate acetyl/butaryl transferase RK21_RS19960 PF00691 OmpA family RK21_RS19960 PF13488 Glycine zipper RK21_RS19965 PF00753 Metallo-beta-lactamase superfamily RK21_RS19970 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RK21_RS19975 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RK21_RS19990 PF00069 Protein kinase domain RK21_RS19990 PF13191 AAA ATPase domain RK21_RS19995 PF07044 Protein of unknown function (DUF1329) RK21_RS20005 PF13193 AMP-binding enzyme C-terminal domain RK21_RS20005 PF00501 AMP-binding enzyme RK21_RS20010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS20010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS20015 PF05175 Methyltransferase small domain RK21_RS20015 PF08468 Methyltransferase small domain N-terminal RK21_RS20020 PF01169 Uncharacterized protein family UPF0016 RK21_RS20030 PF02586 SOS response associated peptidase (SRAP) RK21_RS20065 PF06039 Malate:quinone oxidoreductase (Mqo) RK21_RS20085 PF00156 Phosphoribosyl transferase domain RK21_RS20095 PF00860 Permease family RK21_RS20100 PF00762 Ferrochelatase RK21_RS20105 PF01370 NAD dependent epimerase/dehydratase family RK21_RS20105 PF08338 Domain of unknown function (DUF1731) RK21_RS20110 PF01593 Flavin containing amine oxidoreductase RK21_RS20115 PF08349 Protein of unknown function (DUF1722) RK21_RS20120 PF13411 MerR HTH family regulatory protein RK21_RS20125 PF03441 FAD binding domain of DNA photolyase RK21_RS20125 PF00875 DNA photolyase RK21_RS20130 PF00106 short chain dehydrogenase RK21_RS20135 PF09411 Lipid A 3-O-deacylase (PagL) RK21_RS20140 PF01177 Asp/Glu/Hydantoin racemase RK21_RS20145 PF00899 ThiF family RK21_RS20150 PF05175 Methyltransferase small domain RK21_RS20150 PF17827 PrmC N-terminal domain RK21_RS20155 PF03462 PCRF domain RK21_RS20155 PF00472 RF-1 domain RK21_RS20160 PF01488 Shikimate / quinate 5-dehydrogenase RK21_RS20160 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RK21_RS20160 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RK21_RS20170 PF03550 Outer membrane lipoprotein LolB RK21_RS20175 PF00288 GHMP kinases N terminal domain RK21_RS20175 PF08544 GHMP kinases C terminal RK21_RS20185 PF14572 Phosphoribosyl synthetase-associated domain RK21_RS20185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RK21_RS20190 PF01386 Ribosomal L25p family RK21_RS20190 PF14693 Ribosomal protein TL5, C-terminal domain RK21_RS20195 PF01195 Peptidyl-tRNA hydrolase RK21_RS20200 PF01926 50S ribosome-binding GTPase RK21_RS20200 PF06071 Protein of unknown function (DUF933) RK21_RS20210 PF09588 YqaJ-like viral recombinase domain RK21_RS20220 PF04002 RadC-like JAB domain RK21_RS20245 PF01361 Tautomerase enzyme RK21_RS20255 PF07836 DmpG-like communication domain RK21_RS20255 PF00682 HMGL-like RK21_RS20260 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation RK21_RS20260 PF01118 Semialdehyde dehydrogenase, NAD binding domain RK21_RS20270 PF00561 alpha/beta hydrolase fold RK21_RS20275 PF00171 Aldehyde dehydrogenase family RK21_RS20280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RK21_RS20285 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS20290 PF00111 2Fe-2S iron-sulfur cluster binding domain RK21_RS20290 PF00970 Oxidoreductase FAD-binding domain RK21_RS20290 PF00175 Oxidoreductase NAD-binding domain RK21_RS20295 PF04663 Phenol hydroxylase conserved region RK21_RS20305 PF02406 MmoB/DmpM family RK21_RS20310 PF02332 Methane/Phenol/Toluene Hydroxylase RK21_RS20315 PF06099 Phenol hydroxylase subunit RK21_RS20325 PF06505 Activator of aromatic catabolism RK21_RS20325 PF00158 Sigma-54 interaction domain RK21_RS20325 PF02830 V4R domain RK21_RS20325 PF02954 Bacterial regulatory protein, Fis family RK21_RS20355 PF01609 Transposase DDE domain RK21_RS20355 PF05598 Transposase domain (DUF772) RK21_RS20365 PF00753 Metallo-beta-lactamase superfamily RK21_RS20370 PF00465 Iron-containing alcohol dehydrogenase RK21_RS20375 PF00158 Sigma-54 interaction domain RK21_RS20375 PF02954 Bacterial regulatory protein, Fis family RK21_RS20375 PF00072 Response regulator receiver domain RK21_RS20380 PF05598 Transposase domain (DUF772) RK21_RS20380 PF01609 Transposase DDE domain RK21_RS20385 PF01548 Transposase RK21_RS20385 PF02371 Transposase IS116/IS110/IS902 family RK21_RS20395 PF13276 HTH-like domain RK21_RS20395 PF00665 Integrase core domain RK21_RS20395 PF13333 Integrase core domain RK21_RS20400 PF01527 Transposase RK21_RS20410 PF09339 IclR helix-turn-helix domain RK21_RS20410 PF01614 Bacterial transcriptional regulator RK21_RS20415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS20415 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS20420 PF00873 AcrB/AcrD/AcrF family RK21_RS20425 PF02321 Outer membrane efflux protein RK21_RS20470 PF00916 Sulfate permease family RK21_RS20470 PF01740 STAS domain RK21_RS20480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS20480 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS20485 PF02321 Outer membrane efflux protein RK21_RS20490 PF01594 AI-2E family transporter RK21_RS20495 PF02254 TrkA-N domain RK21_RS20495 PF00999 Sodium/hydrogen exchanger family RK21_RS20500 PF03976 Polyphosphate kinase 2 (PPK2) RK21_RS20505 PF00857 Isochorismatase family RK21_RS20510 PF00202 Aminotransferase class-III RK21_RS20515 PF00171 Aldehyde dehydrogenase family RK21_RS20520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family RK21_RS20525 PF00557 Metallopeptidase family M24 RK21_RS20525 PF01321 Creatinase/Prolidase N-terminal domain RK21_RS20530 PF02423 Ornithine cyclodeaminase/mu-crystallin family RK21_RS20535 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS20540 PF00155 Aminotransferase class I and II RK21_RS20540 PF00392 Bacterial regulatory proteins, gntR family RK21_RS20545 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS20550 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS20555 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS20560 PF00005 ABC transporter RK21_RS20580 PF00171 Aldehyde dehydrogenase family RK21_RS20595 PF12795 Mechanosensitive ion channel porin domain RK21_RS20595 PF12794 Mechanosensitive ion channel inner membrane domain 1 RK21_RS20595 PF00924 Mechanosensitive ion channel RK21_RS20600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RK21_RS20600 PF12833 Helix-turn-helix domain RK21_RS20600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RK21_RS20600 PF02805 Metal binding domain of Ada RK21_RS20615 PF07690 Major Facilitator Superfamily RK21_RS20635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS20635 PF03466 LysR substrate binding domain RK21_RS20650 PF00583 Acetyltransferase (GNAT) family RK21_RS20675 PF05981 CreA protein RK21_RS20680 PF00696 Amino acid kinase family RK21_RS20680 PF01472 PUA domain RK21_RS20685 PF01018 GTP1/OBG RK21_RS20685 PF01926 50S ribosome-binding GTPase RK21_RS20690 PF01016 Ribosomal L27 protein RK21_RS20695 PF00829 Ribosomal prokaryotic L21 protein RK21_RS20700 PF00348 Polyprenyl synthetase RK21_RS20705 PF08274 PhnA Zinc-Ribbon RK21_RS20705 PF03831 PhnA domain RK21_RS20715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS20715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RK21_RS20725 PF03350 Uncharacterized protein family, UPF0114 RK21_RS20735 PF13654 AAA domain RK21_RS20735 PF05362 Lon protease (S16) C-terminal proteolytic domain RK21_RS20755 PF03449 Transcription elongation factor, N-terminal RK21_RS20755 PF01272 Transcription elongation factor, GreA/GreB, C-term RK21_RS20760 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RK21_RS20760 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RK21_RS20765 PF00005 ABC transporter RK21_RS20765 PF12848 ABC transporter RK21_RS20775 PF00563 EAL domain RK21_RS20775 PF03707 Bacterial signalling protein N terminal repeat RK21_RS20775 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS20780 PF00464 Serine hydroxymethyltransferase RK21_RS20795 PF00171 Aldehyde dehydrogenase family RK21_RS20800 PF03447 Homoserine dehydrogenase, NAD binding domain RK21_RS20800 PF00742 Homoserine dehydrogenase RK21_RS20805 PF01037 Lrp/AsnC ligand binding domain RK21_RS20810 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS20810 PF14821 Threonine synthase N terminus RK21_RS20815 PF03466 LysR substrate binding domain RK21_RS20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS20820 PF00324 Amino acid permease RK21_RS20825 PF01053 Cys/Met metabolism PLP-dependent enzyme RK21_RS20835 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS20840 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS20845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RK21_RS20845 PF00056 lactate/malate dehydrogenase, NAD binding domain RK21_RS20850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS20850 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS20855 PF02954 Bacterial regulatory protein, Fis family RK21_RS20855 PF00158 Sigma-54 interaction domain RK21_RS20855 PF00072 Response regulator receiver domain RK21_RS20865 PF07690 Major Facilitator Superfamily RK21_RS20880 PF01527 Transposase RK21_RS20885 PF13276 HTH-like domain RK21_RS20885 PF00665 Integrase core domain RK21_RS20885 PF13333 Integrase core domain RK21_RS20900 PF00589 Phage integrase family RK21_RS20900 PF13356 Arm DNA-binding domain RK21_RS20910 PF00114 Pilin (bacterial filament) RK21_RS20910 PF07963 Prokaryotic N-terminal methylation motif RK21_RS20915 PF00482 Type II secretion system (T2SS), protein F RK21_RS20920 PF06750 Bacterial Peptidase A24 N-terminal domain RK21_RS20920 PF01478 Type IV leader peptidase family RK21_RS20925 PF01121 Dephospho-CoA kinase RK21_RS20930 PF03884 DNA gyrase inhibitor YacG RK21_RS20955 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS20985 PF02861 Clp amino terminal domain, pathogenicity island component RK21_RS20985 PF10431 C-terminal, D2-small domain, of ClpB protein RK21_RS20985 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS20985 PF17871 AAA lid domain RK21_RS20985 PF07724 AAA domain (Cdc48 subfamily) RK21_RS20990 PF02578 Multi-copper polyphenol oxidoreductase laccase RK21_RS20995 PF01479 S4 domain RK21_RS20995 PF00849 RNA pseudouridylate synthase RK21_RS21000 PF13525 Outer membrane lipoprotein RK21_RS21010 PF01266 FAD dependent oxidoreductase RK21_RS21015 PF07963 Prokaryotic N-terminal methylation motif RK21_RS21015 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor RK21_RS21040 PF02401 LytB protein RK21_RS21045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS21050 PF01252 Signal peptidase (SPase) II RK21_RS21055 PF00133 tRNA synthetases class I (I, L, M and V) RK21_RS21055 PF06827 Zinc finger found in FPG and IleRS RK21_RS21055 PF08264 Anticodon-binding domain of tRNA RK21_RS21060 PF06574 FAD synthetase RK21_RS21060 PF01687 Riboflavin kinase RK21_RS21065 PF03023 Lipid II flippase MurJ RK21_RS21070 PF01649 Ribosomal protein S20 RK21_RS21075 PF02470 MlaD protein RK21_RS21080 PF04403 Paraquat-inducible protein A RK21_RS21085 PF04403 Paraquat-inducible protein A RK21_RS21105 PF00171 Aldehyde dehydrogenase family RK21_RS21110 PF00202 Aminotransferase class-III RK21_RS21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS21115 PF03466 LysR substrate binding domain RK21_RS21120 PF00440 Bacterial regulatory proteins, tetR family RK21_RS21120 PF08362 YcdC-like protein, C-terminal region RK21_RS21125 PF09186 Domain of unknown function (DUF1949) RK21_RS21125 PF01205 Uncharacterized protein family UPF0029 RK21_RS21130 PF00106 short chain dehydrogenase RK21_RS21135 PF00962 Adenosine/AMP deaminase RK21_RS21145 PF07690 Major Facilitator Superfamily RK21_RS21160 PF00403 Heavy-metal-associated domain RK21_RS21165 PF09278 MerR, DNA binding RK21_RS21165 PF00376 MerR family regulatory protein RK21_RS21170 PF17200 Single Cache domain 2 RK21_RS21170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS21170 PF00672 HAMP domain RK21_RS21175 PF12833 Helix-turn-helix domain RK21_RS21175 PF02311 AraC-like ligand binding domain RK21_RS21180 PF00108 Thiolase, N-terminal domain RK21_RS21180 PF02803 Thiolase, C-terminal domain RK21_RS21190 PF01575 MaoC like domain RK21_RS21200 PF13847 Methyltransferase domain RK21_RS21220 PF00072 Response regulator receiver domain RK21_RS21220 PF00196 Bacterial regulatory proteins, luxR family RK21_RS21225 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB RK21_RS21225 PF08479 POTRA domain, ShlB-type RK21_RS21230 PF00905 Penicillin binding protein transpeptidase domain RK21_RS21230 PF00912 Transglycosylase RK21_RS21230 PF06832 Penicillin-Binding Protein C-terminus Family RK21_RS21240 PF00207 Alpha-2-macroglobulin family RK21_RS21240 PF07678 A-macroglobulin TED domain RK21_RS21240 PF01835 MG2 domain RK21_RS21240 PF17962 Bacterial macroglobulin domain 6 RK21_RS21240 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain RK21_RS21240 PF11974 Bacterial alpha-2-macroglobulin MG3 domain RK21_RS21240 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain RK21_RS21240 PF07703 Alpha-2-macroglobulin bait region domain RK21_RS21240 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain RK21_RS21245 PF01554 MatE RK21_RS21255 PF17944 Arginine decarboxylase C-terminal helical extension RK21_RS21255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RK21_RS21255 PF17810 Arginine decarboxylase helical bundle domain RK21_RS21260 PF01253 Translation initiation factor SUI1 RK21_RS21265 PF00293 NUDIX domain RK21_RS21275 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS21275 PF00072 Response regulator receiver domain RK21_RS21285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS21290 PF02683 Cytochrome C biogenesis protein transmembrane region RK21_RS21290 PF11412 Disulphide bond corrector protein DsbC RK21_RS21295 PF01220 Dehydroquinase class II RK21_RS21300 PF00364 Biotin-requiring enzyme RK21_RS21305 PF00289 Biotin carboxylase, N-terminal domain RK21_RS21305 PF02785 Biotin carboxylase C-terminal domain RK21_RS21305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RK21_RS21310 PF02954 Bacterial regulatory protein, Fis family RK21_RS21310 PF00158 Sigma-54 interaction domain RK21_RS21310 PF01590 GAF domain RK21_RS21315 PF01513 ATP-NAD kinase RK21_RS21320 PF00676 Dehydrogenase E1 component RK21_RS21325 PF02780 Transketolase, C-terminal domain RK21_RS21325 PF02779 Transketolase, pyrimidine binding domain RK21_RS21330 PF00561 alpha/beta hydrolase fold RK21_RS21330 PF00364 Biotin-requiring enzyme RK21_RS21335 PF00107 Zinc-binding dehydrogenase RK21_RS21335 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS21345 PF13460 NAD(P)H-binding RK21_RS21355 PF02441 Flavoprotein RK21_RS21360 PF02875 Mur ligase family, glutamate ligase domain RK21_RS21360 PF01225 Mur ligase family, catalytic domain RK21_RS21360 PF08245 Mur ligase middle domain RK21_RS21365 PF01590 GAF domain RK21_RS21365 PF00158 Sigma-54 interaction domain RK21_RS21365 PF02954 Bacterial regulatory protein, Fis family RK21_RS21370 PF00171 Aldehyde dehydrogenase family RK21_RS21375 PF13520 Amino acid permease RK21_RS21380 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RK21_RS21385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RK21_RS21390 PF00583 Acetyltransferase (GNAT) family RK21_RS21395 PF09335 SNARE associated Golgi protein RK21_RS21400 PF06167 Glucose-regulated metallo-peptidase M90 RK21_RS21405 PF00719 Inorganic pyrophosphatase RK21_RS21415 PF07731 Multicopper oxidase RK21_RS21415 PF07732 Multicopper oxidase RK21_RS21415 PF00394 Multicopper oxidase RK21_RS21425 PF05275 Copper resistance protein B precursor (CopB) RK21_RS21435 PF01266 FAD dependent oxidoreductase RK21_RS21445 PF01139 tRNA-splicing ligase RtcB RK21_RS21450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RK21_RS21455 PF02609 Exonuclease VII small subunit RK21_RS21460 PF00348 Polyprenyl synthetase RK21_RS21465 PF02779 Transketolase, pyrimidine binding domain RK21_RS21465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RK21_RS21465 PF02780 Transketolase, C-terminal domain RK21_RS21470 PF01497 Periplasmic binding protein RK21_RS21480 PF00925 GTP cyclohydrolase II RK21_RS21490 PF04608 Phosphatidylglycerophosphatase A RK21_RS21495 PF02769 AIR synthase related protein, C-terminal domain RK21_RS21495 PF00586 AIR synthase related protein, N-terminal domain RK21_RS21500 PF01029 NusB family RK21_RS21505 PF00885 6,7-dimethyl-8-ribityllumazine synthase RK21_RS21510 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RK21_RS21510 PF00925 GTP cyclohydrolase II RK21_RS21515 PF00677 Lumazine binding domain RK21_RS21520 PF01872 RibD C-terminal domain RK21_RS21520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RK21_RS21525 PF03477 ATP cone domain RK21_RS21540 PF00085 Thioredoxin RK21_RS21555 PF12704 MacB-like periplasmic core domain RK21_RS21555 PF02687 FtsX-like permease family RK21_RS21555 PF00005 ABC transporter RK21_RS21570 PF03922 OmpW family RK21_RS21580 PF01638 HxlR-like helix-turn-helix RK21_RS21585 PF01370 NAD dependent epimerase/dehydratase family RK21_RS21600 PF01925 Sulfite exporter TauE/SafE RK21_RS21610 PF01235 Sodium:alanine symporter family RK21_RS21615 PF17763 Glutaminase/Asparaginase C-terminal domain RK21_RS21615 PF00710 Asparaginase, N-terminal RK21_RS21625 PF00009 Elongation factor Tu GTP binding domain RK21_RS21625 PF03144 Elongation factor Tu domain 2 RK21_RS21625 PF09106 Elongation factor SelB, winged helix RK21_RS21625 PF09107 Elongation factor SelB, winged helix RK21_RS21630 PF03841 L-seryl-tRNA selenium transferase RK21_RS21630 PF12390 Selenocysteine synthase N terminal RK21_RS21635 PF04216 Protein involved in formate dehydrogenase formation RK21_RS21640 PF01292 Prokaryotic cytochrome b561 RK21_RS21645 PF09163 Formate dehydrogenase N, transmembrane RK21_RS21645 PF13247 4Fe-4S dicluster domain RK21_RS21650 PF00384 Molybdopterin oxidoreductase RK21_RS21650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS21650 PF01568 Molydopterin dinucleotide binding domain RK21_RS21655 PF01568 Molydopterin dinucleotide binding domain RK21_RS21655 PF00384 Molybdopterin oxidoreductase RK21_RS21655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RK21_RS21660 PF00106 short chain dehydrogenase RK21_RS21665 PF01925 Sulfite exporter TauE/SafE RK21_RS21670 PF00155 Aminotransferase class I and II RK21_RS21670 PF00392 Bacterial regulatory proteins, gntR family RK21_RS21675 PF00436 Single-strand binding protein family RK21_RS21680 PF07690 Major Facilitator Superfamily RK21_RS21685 PF17760 UvrA interaction domain RK21_RS21685 PF17755 UvrA DNA-binding domain RK21_RS21690 PF00210 Ferritin-like domain RK21_RS21695 PF06628 Catalase-related immune-responsive RK21_RS21695 PF00199 Catalase RK21_RS21700 PF01196 Ribosomal protein L17 RK21_RS21705 PF01000 RNA polymerase Rpb3/RpoA insert domain RK21_RS21705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RK21_RS21705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RK21_RS21710 PF00163 Ribosomal protein S4/S9 N-terminal domain RK21_RS21710 PF01479 S4 domain RK21_RS21715 PF00411 Ribosomal protein S11 RK21_RS21720 PF00416 Ribosomal protein S13/S18 RK21_RS21725 PF00444 Ribosomal protein L36 RK21_RS21730 PF00344 SecY translocase RK21_RS21735 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RK21_RS21740 PF00327 Ribosomal protein L30p/L7e RK21_RS21745 PF03719 Ribosomal protein S5, C-terminal domain RK21_RS21745 PF00333 Ribosomal protein S5, N-terminal domain RK21_RS21750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RK21_RS21755 PF00347 Ribosomal protein L6 RK21_RS21760 PF00410 Ribosomal protein S8 RK21_RS21765 PF00253 Ribosomal protein S14p/S29e RK21_RS21770 PF00281 Ribosomal protein L5 RK21_RS21770 PF00673 ribosomal L5P family C-terminus RK21_RS21775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RK21_RS21775 PF00467 KOW motif RK21_RS21780 PF00238 Ribosomal protein L14p/L23e RK21_RS21785 PF00366 Ribosomal protein S17 RK21_RS21790 PF00831 Ribosomal L29 protein RK21_RS21795 PF00252 Ribosomal protein L16p/L10e RK21_RS21800 PF00189 Ribosomal protein S3, C-terminal domain RK21_RS21800 PF07650 KH domain RK21_RS21805 PF00237 Ribosomal protein L22p/L17e RK21_RS21810 PF00203 Ribosomal protein S19 RK21_RS21815 PF03947 Ribosomal Proteins L2, C-terminal domain RK21_RS21815 PF00181 Ribosomal Proteins L2, RNA binding domain RK21_RS21820 PF00276 Ribosomal protein L23 RK21_RS21825 PF00573 Ribosomal protein L4/L1 family RK21_RS21830 PF00297 Ribosomal protein L3 RK21_RS21835 PF00338 Ribosomal protein S10p/S20e RK21_RS21840 PF03144 Elongation factor Tu domain 2 RK21_RS21840 PF03143 Elongation factor Tu C-terminal domain RK21_RS21840 PF00009 Elongation factor Tu GTP binding domain RK21_RS21845 PF03764 Elongation factor G, domain IV RK21_RS21845 PF00009 Elongation factor Tu GTP binding domain RK21_RS21845 PF03144 Elongation factor Tu domain 2 RK21_RS21845 PF14492 Elongation Factor G, domain II RK21_RS21845 PF00679 Elongation factor G C-terminus RK21_RS21850 PF00177 Ribosomal protein S7p/S5e RK21_RS21855 PF00164 Ribosomal protein S12/S23 RK21_RS21860 PF04997 RNA polymerase Rpb1, domain 1 RK21_RS21860 PF04998 RNA polymerase Rpb1, domain 5 RK21_RS21860 PF05000 RNA polymerase Rpb1, domain 4 RK21_RS21860 PF04983 RNA polymerase Rpb1, domain 3 RK21_RS21860 PF00623 RNA polymerase Rpb1, domain 2 RK21_RS21865 PF04561 RNA polymerase Rpb2, domain 2 RK21_RS21865 PF04563 RNA polymerase beta subunit RK21_RS21865 PF04565 RNA polymerase Rpb2, domain 3 RK21_RS21865 PF04560 RNA polymerase Rpb2, domain 7 RK21_RS21865 PF10385 RNA polymerase beta subunit external 1 domain RK21_RS21865 PF00562 RNA polymerase Rpb2, domain 6 RK21_RS21870 PF16320 Ribosomal protein L7/L12 dimerisation domain RK21_RS21870 PF00542 Ribosomal protein L7/L12 C-terminal domain RK21_RS21875 PF00466 Ribosomal protein L10 RK21_RS21880 PF00687 Ribosomal protein L1p/L10e family RK21_RS21885 PF03946 Ribosomal protein L11, N-terminal domain RK21_RS21885 PF00298 Ribosomal protein L11, RNA binding domain RK21_RS21890 PF02357 Transcription termination factor nusG RK21_RS21890 PF00467 KOW motif RK21_RS21895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RK21_RS21905 PF03143 Elongation factor Tu C-terminal domain RK21_RS21905 PF03144 Elongation factor Tu domain 2 RK21_RS21905 PF00009 Elongation factor Tu GTP binding domain RK21_RS21930 PF03309 Type III pantothenate kinase RK21_RS21935 PF03099 Biotin/lipoate A/B protein ligase family RK21_RS21935 PF08279 HTH domain RK21_RS21935 PF02237 Biotin protein ligase C terminal domain RK21_RS21955 PF01479 S4 domain RK21_RS21955 PF00579 tRNA synthetases class I (W and Y) RK21_RS21960 PF01551 Peptidase family M23 RK21_RS21960 PF04225 Opacity-associated protein A LysM-like domain RK21_RS21965 PF03702 Anhydro-N-acetylmuramic acid kinase RK21_RS21970 PF01521 Iron-sulphur cluster biosynthesis RK21_RS21975 PF02774 Semialdehyde dehydrogenase, dimerisation domain RK21_RS21975 PF01118 Semialdehyde dehydrogenase, NAD binding domain RK21_RS21980 PF03653 Uncharacterised protein family (UPF0093) RK21_RS21990 PF00106 short chain dehydrogenase RK21_RS21995 PF01230 HIT domain RK21_RS22000 PF03232 Ubiquinone biosynthesis protein COQ7 RK21_RS22010 PF02566 OsmC-like protein RK21_RS22015 PF00027 Cyclic nucleotide-binding domain RK21_RS22015 PF13545 Crp-like helix-turn-helix domain RK21_RS22025 PF00218 Indole-3-glycerol phosphate synthase RK21_RS22030 PF02885 Glycosyl transferase family, helical bundle domain RK21_RS22030 PF00591 Glycosyl transferase family, a/b domain RK21_RS22035 PF00117 Glutamine amidotransferase class-I RK21_RS22040 PF00657 GDSL-like Lipase/Acylhydrolase RK21_RS22040 PF03797 Autotransporter beta-domain RK21_RS22045 PF00425 chorismate binding enzyme RK21_RS22045 PF04715 Anthranilate synthase component I, N terminal region RK21_RS22050 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS22055 PF00834 Ribulose-phosphate 3 epimerase family RK21_RS22060 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22065 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22075 PF08402 TOBE domain RK21_RS22075 PF00005 ABC transporter RK21_RS22080 PF00196 Bacterial regulatory proteins, luxR family RK21_RS22080 PF00072 Response regulator receiver domain RK21_RS22085 PF07730 Histidine kinase RK21_RS22085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS22085 PF00672 HAMP domain RK21_RS22095 PF00226 DnaJ domain RK21_RS22095 PF05099 Tellurite resistance protein TerB RK21_RS22100 PF00483 Nucleotidyl transferase RK21_RS22105 PF01636 Phosphotransferase enzyme family RK21_RS22110 PF04453 LPS transport system D RK21_RS22110 PF03968 OstA-like protein RK21_RS22115 PF00639 PPIC-type PPIASE domain RK21_RS22115 PF09312 SurA N-terminal domain RK21_RS22120 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RK21_RS22125 PF00398 Ribosomal RNA adenine dimethylase RK21_RS22130 PF04379 ApaG domain RK21_RS22135 PF00149 Calcineurin-like phosphoesterase RK21_RS22140 PF00581 Rhodanese-like domain RK21_RS22145 PF08298 PrkA AAA domain RK21_RS22145 PF06798 PrkA serine protein kinase C-terminal domain RK21_RS22150 PF04285 Protein of unknown function (DUF444) RK21_RS22155 PF04293 SpoVR like protein RK21_RS22160 PF12627 Probable RNA and SrmB- binding site of polymerase A RK21_RS22160 PF01743 Poly A polymerase head domain RK21_RS22170 PF02152 Dihydroneopterin aldolase RK21_RS22175 PF02660 Glycerol-3-phosphate acyltransferase RK21_RS22180 PF00814 Glycoprotease family RK21_RS22185 PF01165 Ribosomal protein S21 RK21_RS22190 PF08275 DNA primase catalytic core, N-terminal domain RK21_RS22190 PF13662 Toprim domain RK21_RS22190 PF08278 DNA primase DnaG DnaB-binding RK21_RS22190 PF10410 DnaB-helicase binding domain of primase RK21_RS22190 PF01807 CHC2 zinc finger RK21_RS22195 PF04546 Sigma-70, non-essential region RK21_RS22195 PF04545 Sigma-70, region 4 RK21_RS22195 PF04542 Sigma-70 region 2 RK21_RS22195 PF04539 Sigma-70 region 3 RK21_RS22195 PF03979 Sigma-70 factor, region 1.1 RK21_RS22195 PF00140 Sigma-70 factor, region 1.2 RK21_RS22200 PF00563 EAL domain RK21_RS22200 PF03707 Bacterial signalling protein N terminal repeat RK21_RS22200 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS22210 PF00589 Phage integrase family RK21_RS22215 PF01527 Transposase RK21_RS22220 PF13276 HTH-like domain RK21_RS22220 PF13333 Integrase core domain RK21_RS22220 PF00665 Integrase core domain RK21_RS22240 PF01593 Flavin containing amine oxidoreductase RK21_RS22245 PF00795 Carbon-nitrogen hydrolase RK21_RS22250 PF00675 Insulinase (Peptidase family M16) RK21_RS22255 PF12706 Beta-lactamase superfamily domain RK21_RS22260 PF03070 TENA/THI-4/PQQC family RK21_RS22265 PF05402 Coenzyme PQQ synthesis protein D (PqqD) RK21_RS22270 PF04055 Radical SAM superfamily RK21_RS22270 PF13186 Iron-sulfur cluster-binding domain RK21_RS22275 PF00326 Prolyl oligopeptidase family RK21_RS22285 PF00202 Aminotransferase class-III RK21_RS22290 PF03466 LysR substrate binding domain RK21_RS22290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS22295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS22295 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS22295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS22295 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS22300 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS22305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS22305 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS22305 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS22305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS22320 PF08241 Methyltransferase domain RK21_RS22330 PF00155 Aminotransferase class I and II RK21_RS22335 PF04055 Radical SAM superfamily RK21_RS22335 PF06968 Biotin and Thiamin Synthesis associated domain RK21_RS22340 PF00156 Phosphoribosyl transferase domain RK21_RS22345 PF03459 TOBE domain RK21_RS22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS22355 PF00892 EamA-like transporter family RK21_RS22365 PF01274 Malate synthase RK21_RS22370 PF00072 Response regulator receiver domain RK21_RS22370 PF00158 Sigma-54 interaction domain RK21_RS22380 PF00929 Exonuclease RK21_RS22385 PF08281 Sigma-70, region 4 RK21_RS22385 PF04542 Sigma-70 region 2 RK21_RS22390 PF16220 Domain of unknown function (DUF4880) RK21_RS22390 PF04773 FecR protein RK21_RS22395 PF07715 TonB-dependent Receptor Plug Domain RK21_RS22395 PF00593 TonB dependent receptor RK21_RS22435 PF13439 Glycosyltransferase Family 4 RK21_RS22435 PF00534 Glycosyl transferases group 1 RK21_RS22440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RK21_RS22445 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RK21_RS22450 PF08335 GlnD PII-uridylyltransferase RK21_RS22450 PF03710 Glutamate-ammonia ligase adenylyltransferase RK21_RS22455 PF00456 Transketolase, thiamine diphosphate binding domain RK21_RS22455 PF17831 Pyruvate dehydrogenase E1 component middle domain RK21_RS22460 PF02817 e3 binding domain RK21_RS22460 PF00364 Biotin-requiring enzyme RK21_RS22460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RK21_RS22465 PF00563 EAL domain RK21_RS22465 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS22465 PF03707 Bacterial signalling protein N terminal repeat RK21_RS22470 PF01625 Peptide methionine sulfoxide reductase RK21_RS22480 PF06123 Inner membrane protein CreD RK21_RS22485 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS22485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS22485 PF00672 HAMP domain RK21_RS22490 PF00486 Transcriptional regulatory protein, C terminal RK21_RS22490 PF00072 Response regulator receiver domain RK21_RS22500 PF01553 Acyltransferase RK21_RS22505 PF00324 Amino acid permease RK21_RS22515 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS22515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RK21_RS22525 PF00551 Formyl transferase RK21_RS22535 PF17806 Sarcosine oxidase A3 domain RK21_RS22535 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS22535 PF08669 Glycine cleavage T-protein C-terminal barrel domain RK21_RS22535 PF01571 Aminomethyltransferase folate-binding domain RK21_RS22545 PF01266 FAD dependent oxidoreductase RK21_RS22550 PF00464 Serine hydroxymethyltransferase RK21_RS22555 PF01212 Beta-eliminating lyase RK21_RS22560 PF00672 HAMP domain RK21_RS22560 PF02743 Cache domain RK21_RS22560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS22575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS22575 PF00672 HAMP domain RK21_RS22575 PF12729 Four helix bundle sensory module for signal transduction RK21_RS22585 PF00970 Oxidoreductase FAD-binding domain RK21_RS22585 PF00042 Globin RK21_RS22585 PF00175 Oxidoreductase NAD-binding domain RK21_RS22590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RK21_RS22590 PF00355 Rieske [2Fe-2S] domain RK21_RS22605 PF00766 Electron transfer flavoprotein FAD-binding domain RK21_RS22605 PF01012 Electron transfer flavoprotein domain RK21_RS22610 PF13183 4Fe-4S dicluster domain RK21_RS22610 PF02754 Cysteine-rich domain RK21_RS22615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RK21_RS22645 PF01965 DJ-1/PfpI family RK21_RS22645 PF12833 Helix-turn-helix domain RK21_RS22655 PF05853 beta-keto acid cleavage enzyme RK21_RS22660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS22660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS22665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RK21_RS22665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RK21_RS22675 PF01965 DJ-1/PfpI family RK21_RS22675 PF12833 Helix-turn-helix domain RK21_RS22680 PF03315 Serine dehydratase beta chain RK21_RS22680 PF03313 Serine dehydratase alpha chain RK21_RS22685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RK21_RS22690 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22695 PF00571 CBS domain RK21_RS22695 PF00005 ABC transporter RK21_RS22700 PF00977 Histidine biosynthesis protein RK21_RS22705 PF00977 Histidine biosynthesis protein RK21_RS22715 PF00117 Glutamine amidotransferase class-I RK21_RS22720 PF00475 Imidazoleglycerol-phosphate dehydratase RK21_RS22725 PF07690 Major Facilitator Superfamily RK21_RS22735 PF00633 Helix-hairpin-helix motif RK21_RS22735 PF00730 HhH-GPD superfamily base excision DNA repair protein RK21_RS22735 PF14815 NUDIX domain RK21_RS22740 PF04362 Bacterial Fe(2+) trafficking RK21_RS22750 PF03976 Polyphosphate kinase 2 (PPK2) RK21_RS22760 PF00324 Amino acid permease RK21_RS22765 PF00005 ABC transporter RK21_RS22770 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS22775 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22780 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22810 PF07660 Secretin and TonB N terminus short domain RK21_RS22810 PF00593 TonB dependent receptor RK21_RS22810 PF07715 TonB-dependent Receptor Plug Domain RK21_RS22815 PF00072 Response regulator receiver domain RK21_RS22815 PF00486 Transcriptional regulatory protein, C terminal RK21_RS22820 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS22820 PF00672 HAMP domain RK21_RS22825 PF01645 Conserved region in glutamate synthase RK21_RS22830 PF03573 outer membrane porin, OprD family RK21_RS22835 PF07715 TonB-dependent Receptor Plug Domain RK21_RS22835 PF00593 TonB dependent receptor RK21_RS22840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS22845 PF04371 Porphyromonas-type peptidyl-arginine deiminase RK21_RS22850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RK21_RS22855 PF02743 Cache domain RK21_RS22855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS22855 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS22860 PF00158 Sigma-54 interaction domain RK21_RS22860 PF00072 Response regulator receiver domain RK21_RS22860 PF02954 Bacterial regulatory protein, Fis family RK21_RS22870 PF00459 Inositol monophosphatase family RK21_RS22875 PF00293 NUDIX domain RK21_RS22880 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS22885 PF01476 LysM domain RK21_RS22885 PF04972 BON domain RK21_RS22890 PF02634 FdhD/NarQ family RK21_RS22895 PF00384 Molybdopterin oxidoreductase RK21_RS22910 PF01293 Phosphoenolpyruvate carboxykinase RK21_RS22915 PF01430 Hsp33 protein RK21_RS22925 PF01479 S4 domain RK21_RS22930 PF08443 RimK-like ATP-grasp domain RK21_RS22930 PF18030 RimK PreATP-grasp domain RK21_RS22935 PF18030 RimK PreATP-grasp domain RK21_RS22935 PF08443 RimK-like ATP-grasp domain RK21_RS22945 PF06958 S-type Pyocin RK21_RS22950 PF01320 Colicin immunity protein / pyocin immunity protein RK21_RS22955 PF14602 Hexapeptide repeat of succinyl-transferase RK21_RS22955 PF12464 Maltose acetyltransferase RK21_RS22960 PF01804 Penicillin amidase RK21_RS22965 PF00561 alpha/beta hydrolase fold RK21_RS22970 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS22975 PF00005 ABC transporter RK21_RS22980 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22985 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS22990 PF03180 NLPA lipoprotein RK21_RS22995 PF00158 Sigma-54 interaction domain RK21_RS23005 PF00005 ABC transporter RK21_RS23005 PF12857 TOBE-like domain RK21_RS23010 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23015 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23030 PF00873 AcrB/AcrD/AcrF family RK21_RS23035 PF13533 Biotin-lipoyl like RK21_RS23055 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23060 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23065 PF00005 ABC transporter RK21_RS23065 PF08402 TOBE domain RK21_RS23070 PF13416 Bacterial extracellular solute-binding protein RK21_RS23075 PF13416 Bacterial extracellular solute-binding protein RK21_RS23080 PF00202 Aminotransferase class-III RK21_RS23085 PF00120 Glutamine synthetase, catalytic domain RK21_RS23095 PF00120 Glutamine synthetase, catalytic domain RK21_RS23100 PF00696 Amino acid kinase family RK21_RS23100 PF00583 Acetyltransferase (GNAT) family RK21_RS23105 PF07687 Peptidase dimerisation domain RK21_RS23105 PF01546 Peptidase family M20/M25/M40 RK21_RS23115 PF01037 Lrp/AsnC ligand binding domain RK21_RS23115 PF13404 AsnC-type helix-turn-helix domain RK21_RS23125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain RK21_RS23125 PF00437 Type II/IV secretion system protein RK21_RS23135 PF02347 Glycine cleavage system P-protein RK21_RS23140 PF01597 Glycine cleavage H-protein RK21_RS23145 PF08669 Glycine cleavage T-protein C-terminal barrel domain RK21_RS23145 PF01571 Aminomethyltransferase folate-binding domain RK21_RS23150 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23160 PF01494 FAD binding domain RK21_RS23170 PF01494 FAD binding domain RK21_RS23175 PF00557 Metallopeptidase family M24 RK21_RS23175 PF05195 Aminopeptidase P, N-terminal domain RK21_RS23180 PF03695 Uncharacterised protein family (UPF0149) RK21_RS23190 PF05164 Cell division protein ZapA RK21_RS23195 PF01812 5-formyltetrahydrofolate cyclo-ligase family RK21_RS23205 PF13533 Biotin-lipoyl like RK21_RS23210 PF00005 ABC transporter RK21_RS23225 PF00107 Zinc-binding dehydrogenase RK21_RS23225 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS23235 PF00175 Oxidoreductase NAD-binding domain RK21_RS23240 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RK21_RS23245 PF07497 Rho termination factor, RNA-binding domain RK21_RS23245 PF07498 Rho termination factor, N-terminal domain RK21_RS23245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RK21_RS23250 PF00085 Thioredoxin RK21_RS23255 PF02541 Ppx/GppA phosphatase family RK21_RS23260 PF02503 Polyphosphate kinase middle domain RK21_RS23260 PF13090 Polyphosphate kinase C-terminal domain 2 RK21_RS23260 PF17941 Polyphosphate kinase C-terminal domain 1 RK21_RS23260 PF13089 Polyphosphate kinase N-terminal domain RK21_RS23270 PF04116 Fatty acid hydroxylase superfamily RK21_RS23280 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RK21_RS23285 PF01295 Adenylate cyclase, class-I RK21_RS23285 PF12633 Adenylate cyclase NT domain RK21_RS23290 PF01272 Transcription elongation factor, GreA/GreB, C-term RK21_RS23290 PF14760 Rnk N-terminus RK21_RS23300 PF01491 Frataxin-like domain RK21_RS23305 PF13627 Prokaryotic lipoprotein-attachment site RK21_RS23310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RK21_RS23310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RK21_RS23315 PF01678 Diaminopimelate epimerase RK21_RS23325 PF02899 Phage integrase, N-terminal SAM-like domain RK21_RS23325 PF00589 Phage integrase family RK21_RS23330 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS23340 PF00909 Ammonium Transporter Family RK21_RS23345 PF00543 Nitrogen regulatory protein P-II RK21_RS23350 PF04380 Membrane fusogenic activity RK21_RS23360 PF13335 Magnesium chelatase, subunit ChlI C-terminal RK21_RS23360 PF01078 Magnesium chelatase, subunit ChlI RK21_RS23365 PF00072 Response regulator receiver domain RK21_RS23365 PF00196 Bacterial regulatory proteins, luxR family RK21_RS23370 PF00196 Bacterial regulatory proteins, luxR family RK21_RS23370 PF00072 Response regulator receiver domain RK21_RS23375 PF08447 PAS fold RK21_RS23375 PF13493 Domain of unknown function (DUF4118) RK21_RS23375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS23375 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS23375 PF00989 PAS fold RK21_RS23375 PF13426 PAS domain RK21_RS23380 PF00857 Isochorismatase family RK21_RS23390 PF01965 DJ-1/PfpI family RK21_RS23395 PF02254 TrkA-N domain RK21_RS23395 PF00999 Sodium/hydrogen exchanger family RK21_RS23400 PF01381 Helix-turn-helix RK21_RS23410 PF00857 Isochorismatase family RK21_RS23415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23415 PF03466 LysR substrate binding domain RK21_RS23420 PF03573 outer membrane porin, OprD family RK21_RS23430 PF07969 Amidohydrolase family RK21_RS23435 PF00561 alpha/beta hydrolase fold RK21_RS23445 PF00857 Isochorismatase family RK21_RS23455 PF01266 FAD dependent oxidoreductase RK21_RS23460 PF00171 Aldehyde dehydrogenase family RK21_RS23465 PF03466 LysR substrate binding domain RK21_RS23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23470 PF07063 Domain of unknown function (DUF1338) RK21_RS23475 PF03466 LysR substrate binding domain RK21_RS23475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23480 PF01554 MatE RK21_RS23485 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS23485 PF00563 EAL domain RK21_RS23485 PF03707 Bacterial signalling protein N terminal repeat RK21_RS23490 PF00580 UvrD/REP helicase N-terminal domain RK21_RS23490 PF13361 UvrD-like helicase C-terminal domain RK21_RS23500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RK21_RS23500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RK21_RS23505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS23515 PF01168 Alanine racemase, N-terminal domain RK21_RS23515 PF00842 Alanine racemase, C-terminal domain RK21_RS23520 PF01266 FAD dependent oxidoreductase RK21_RS23525 PF01037 Lrp/AsnC ligand binding domain RK21_RS23535 PF01266 FAD dependent oxidoreductase RK21_RS23545 PF00155 Aminotransferase class I and II RK21_RS23545 PF00392 Bacterial regulatory proteins, gntR family RK21_RS23550 PF13091 PLD-like domain RK21_RS23560 PF00171 Aldehyde dehydrogenase family RK21_RS23570 PF00471 Ribosomal protein L33 RK21_RS23580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RK21_RS23585 PF04002 RadC-like JAB domain RK21_RS23590 PF02441 Flavoprotein RK21_RS23590 PF04127 DNA / pantothenate metabolism flavoprotein RK21_RS23595 PF00692 dUTPase RK21_RS23600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RK21_RS23600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RK21_RS23600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RK21_RS23600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RK21_RS23605 PF00696 Amino acid kinase family RK21_RS23610 PF00156 Phosphoribosyl transferase domain RK21_RS23615 PF03372 Endonuclease/Exonuclease/phosphatase family RK21_RS23625 PF03725 3' exoribonuclease family, domain 2 RK21_RS23625 PF01138 3' exoribonuclease family, domain 1 RK21_RS23630 PF08340 Domain of unknown function (DUF1732) RK21_RS23630 PF03755 YicC-like family, N-terminal region RK21_RS23635 PF00625 Guanylate kinase RK21_RS23645 PF07722 Peptidase C26 RK21_RS23650 PF00120 Glutamine synthetase, catalytic domain RK21_RS23655 PF03466 LysR substrate binding domain RK21_RS23655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23660 PF01192 RNA polymerase Rpb6 RK21_RS23665 PF02824 TGS domain RK21_RS23665 PF13291 ACT domain RK21_RS23665 PF04607 Region found in RelA / SpoT proteins RK21_RS23670 PF01042 Endoribonuclease L-PSP RK21_RS23685 PF01618 MotA/TolQ/ExbB proton channel family RK21_RS23690 PF02472 Biopolymer transport protein ExbD/TolR RK21_RS23695 PF03544 Gram-negative bacterial TonB protein C-terminal RK21_RS23700 PF03466 LysR substrate binding domain RK21_RS23700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23705 PF00270 DEAD/DEAH box helicase RK21_RS23705 PF00271 Helicase conserved C-terminal domain RK21_RS23705 PF17191 RecG wedge domain RK21_RS23720 PF00216 Bacterial DNA-binding protein RK21_RS23725 PF18113 Rubredoxin binding C-terminal domain RK21_RS23725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS23730 PF00301 Rubredoxin RK21_RS23735 PF04345 Chorismate lyase RK21_RS23740 PF01040 UbiA prenyltransferase family RK21_RS23750 PF00072 Response regulator receiver domain RK21_RS23750 PF00486 Transcriptional regulatory protein, C terminal RK21_RS23755 PF11808 Phosphate regulon sensor protein PhoR RK21_RS23755 PF00989 PAS fold RK21_RS23755 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS23755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS23760 PF01595 Cyclin M transmembrane N-terminal domain RK21_RS23760 PF00571 CBS domain RK21_RS23760 PF03471 Transporter associated domain RK21_RS23765 PF01476 LysM domain RK21_RS23765 PF01551 Peptidase family M23 RK21_RS23765 PF08525 Opacity-associated protein A N-terminal motif RK21_RS23770 PF00072 Response regulator receiver domain RK21_RS23775 PF01895 PhoU domain RK21_RS23780 PF00005 ABC transporter RK21_RS23785 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23790 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS23795 PF12849 PBP superfamily domain RK21_RS23800 PF07690 Major Facilitator Superfamily RK21_RS23805 PF03061 Thioesterase superfamily RK21_RS23825 PF02222 ATP-grasp domain RK21_RS23825 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RK21_RS23830 PF00731 AIR carboxylase RK21_RS23840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23840 PF03466 LysR substrate binding domain RK21_RS23845 PF00206 Lyase RK21_RS23845 PF10415 Fumarase C C-terminus RK21_RS23850 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RK21_RS23850 PF12833 Helix-turn-helix domain RK21_RS23855 PF00850 Histone deacetylase domain RK21_RS23860 PF13416 Bacterial extracellular solute-binding protein RK21_RS23865 PF00392 Bacterial regulatory proteins, gntR family RK21_RS23865 PF00155 Aminotransferase class I and II RK21_RS23885 PF00682 HMGL-like RK21_RS23885 PF02436 Conserved carboxylase domain RK21_RS23885 PF00364 Biotin-requiring enzyme RK21_RS23890 PF02785 Biotin carboxylase C-terminal domain RK21_RS23890 PF00289 Biotin carboxylase, N-terminal domain RK21_RS23890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RK21_RS23895 PF03466 LysR substrate binding domain RK21_RS23895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS23900 PF01418 Helix-turn-helix domain, rpiR family RK21_RS23900 PF01380 SIS domain RK21_RS23905 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RK21_RS23905 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RK21_RS23915 PF13361 UvrD-like helicase C-terminal domain RK21_RS23915 PF00580 UvrD/REP helicase N-terminal domain RK21_RS23930 PF00999 Sodium/hydrogen exchanger family RK21_RS23930 PF02254 TrkA-N domain RK21_RS23935 PF03061 Thioesterase superfamily RK21_RS23940 PF08543 Phosphomethylpyrimidine kinase RK21_RS23950 PF07683 Cobalamin synthesis protein cobW C-terminal domain RK21_RS23950 PF02492 CobW/HypB/UreG, nucleotide-binding domain RK21_RS23960 PF07683 Cobalamin synthesis protein cobW C-terminal domain RK21_RS23960 PF02492 CobW/HypB/UreG, nucleotide-binding domain RK21_RS23965 PF02649 Type I GTP cyclohydrolase folE2 RK21_RS23970 PF12276 Protein of unknown function (DUF3617) RK21_RS23975 PF13396 Phospholipase_D-nuclease N-terminal RK21_RS23975 PF13091 PLD-like domain RK21_RS23985 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS23985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK21_RS24035 PF03358 NADPH-dependent FMN reductase RK21_RS24040 PF01451 Low molecular weight phosphotyrosine protein phosphatase RK21_RS24045 PF02040 Arsenical pump membrane protein RK21_RS24050 PF01022 Bacterial regulatory protein, arsR family RK21_RS24065 PF03176 MMPL family RK21_RS24070 PF13193 AMP-binding enzyme C-terminal domain RK21_RS24070 PF00501 AMP-binding enzyme RK21_RS24080 PF00005 ABC transporter RK21_RS24085 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS24090 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS24095 PF12849 PBP superfamily domain RK21_RS24125 PF00196 Bacterial regulatory proteins, luxR family RK21_RS24135 PF01548 Transposase RK21_RS24135 PF02371 Transposase IS116/IS110/IS902 family RK21_RS24140 PF01609 Transposase DDE domain RK21_RS24140 PF05598 Transposase domain (DUF772) RK21_RS24145 PF01548 Transposase RK21_RS24145 PF02371 Transposase IS116/IS110/IS902 family RK21_RS24165 PF13276 HTH-like domain RK21_RS24165 PF00665 Integrase core domain RK21_RS24165 PF13333 Integrase core domain RK21_RS24170 PF01527 Transposase RK21_RS24190 PF09828 Chromate resistance exported protein RK21_RS24200 PF09828 Chromate resistance exported protein RK21_RS24205 PF07690 Major Facilitator Superfamily RK21_RS24215 PF01545 Cation efflux family RK21_RS24220 PF02583 Metal-sensitive transcriptional repressor RK21_RS24240 PF09335 SNARE associated Golgi protein RK21_RS24245 PF05857 TraX protein RK21_RS24255 PF01740 STAS domain RK21_RS24255 PF00916 Sulfate permease family RK21_RS24260 PF00582 Universal stress protein family RK21_RS24270 PF03050 Transposase IS66 family RK21_RS24270 PF13007 Transposase C of IS166 homeodomain RK21_RS24270 PF13005 zinc-finger binding domain of transposase IS66 RK21_RS24270 PF13817 IS66 C-terminal element RK21_RS24280 PF00672 HAMP domain RK21_RS24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS24280 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS24285 PF00486 Transcriptional regulatory protein, C terminal RK21_RS24285 PF00072 Response regulator receiver domain RK21_RS24295 PF00394 Multicopper oxidase RK21_RS24295 PF07731 Multicopper oxidase RK21_RS24295 PF07732 Multicopper oxidase RK21_RS24305 PF05275 Copper resistance protein B precursor (CopB) RK21_RS24355 PF01527 Transposase RK21_RS24360 PF00665 Integrase core domain RK21_RS24365 PF13401 AAA domain RK21_RS24365 PF11426 Tn7 transposition regulator TnsC RK21_RS24370 PF00665 Integrase core domain RK21_RS24375 PF08722 TnsA endonuclease N terminal RK21_RS24375 PF08721 TnsA endonuclease C terminal RK21_RS24380 PF00665 Integrase core domain RK21_RS24385 PF01527 Transposase RK21_RS24390 PF01380 SIS domain RK21_RS24395 PF00455 DeoR C terminal sensor domain RK21_RS24395 PF08220 DeoR-like helix-turn-helix domain RK21_RS24400 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS24400 PF12804 MobA-like NTP transferase domain RK21_RS24405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RK21_RS24405 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RK21_RS24410 PF02874 ATP synthase alpha/beta family, beta-barrel domain RK21_RS24410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RK21_RS24415 PF00231 ATP synthase RK21_RS24420 PF00306 ATP synthase alpha/beta chain, C terminal domain RK21_RS24420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RK21_RS24420 PF02874 ATP synthase alpha/beta family, beta-barrel domain RK21_RS24425 PF00213 ATP synthase delta (OSCP) subunit RK21_RS24430 PF00430 ATP synthase B/B' CF(0) RK21_RS24435 PF00137 ATP synthase subunit C RK21_RS24440 PF00119 ATP synthase A chain RK21_RS24445 PF03899 ATP synthase I chain RK21_RS24450 PF02195 ParB-like nuclease domain RK21_RS24450 PF17762 HTH domain found in ParB protein RK21_RS24455 PF13614 AAA domain RK21_RS24460 PF02527 rRNA small subunit methyltransferase G RK21_RS24465 PF13932 GidA associated domain RK21_RS24465 PF01134 Glucose inhibited division protein A RK21_RS24470 PF12631 MnmE helical domain RK21_RS24470 PF10396 GTP-binding protein TrmE N-terminus RK21_RS24470 PF01926 50S ribosome-binding GTPase RK21_RS24475 PF14849 YidC periplasmic domain RK21_RS24475 PF02096 60Kd inner membrane protein RK21_RS24485 PF00308 Bacterial dnaA protein RK21_RS24485 PF11638 DnaA N-terminal domain RK21_RS24485 PF08299 Bacterial dnaA protein helix-turn-helix RK21_RS24490 PF00712 DNA polymerase III beta subunit, N-terminal domain RK21_RS24490 PF02767 DNA polymerase III beta subunit, central domain RK21_RS24490 PF02768 DNA polymerase III beta subunit, C-terminal domain RK21_RS24495 PF02463 RecF/RecN/SMC N terminal domain RK21_RS24500 PF18053 DNA gyrase B subunit insert domain RK21_RS24500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS24500 PF00986 DNA gyrase B subunit, carboxyl terminus RK21_RS24500 PF00204 DNA gyrase B RK21_RS24500 PF01751 Toprim domain RK21_RS24510 PF13333 Integrase core domain RK21_RS24510 PF13276 HTH-like domain RK21_RS24510 PF00665 Integrase core domain RK21_RS24515 PF01527 Transposase RK21_RS24530 PF00884 Sulfatase RK21_RS24530 PF08019 Phosphoethanolamine transferase EptA/EptB RK21_RS24540 PF01545 Cation efflux family RK21_RS24555 PF00072 Response regulator receiver domain RK21_RS24555 PF00486 Transcriptional regulatory protein, C terminal RK21_RS24560 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS24560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS24560 PF00672 HAMP domain RK21_RS24580 PF00535 Glycosyl transferase family 2 RK21_RS24590 PF07396 Phosphate-selective porin O and P RK21_RS24605 PF00403 Heavy-metal-associated domain RK21_RS24615 PF00873 AcrB/AcrD/AcrF family RK21_RS24620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS24620 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS24625 PF02321 Outer membrane efflux protein RK21_RS24630 PF03573 outer membrane porin, OprD family RK21_RS24635 PF00072 Response regulator receiver domain RK21_RS24635 PF00486 Transcriptional regulatory protein, C terminal RK21_RS24650 PF00158 Sigma-54 interaction domain RK21_RS24650 PF00072 Response regulator receiver domain RK21_RS24650 PF02954 Bacterial regulatory protein, Fis family RK21_RS24655 PF00753 Metallo-beta-lactamase superfamily RK21_RS24665 PF01925 Sulfite exporter TauE/SafE RK21_RS24675 PF00732 GMC oxidoreductase RK21_RS24675 PF05199 GMC oxidoreductase RK21_RS24680 PF00083 Sugar (and other) transporter RK21_RS24680 PF08946 Osmosensory transporter coiled coil RK21_RS24695 PF02092 Glycyl-tRNA synthetase beta subunit RK21_RS24695 PF05746 DALR anticodon binding domain RK21_RS24700 PF02091 Glycyl-tRNA synthetase alpha subunit RK21_RS24705 PF03352 Methyladenine glycosylase RK21_RS24720 PF02254 TrkA-N domain RK21_RS24720 PF02080 TrkA-C domain RK21_RS24725 PF01189 16S rRNA methyltransferase RsmB/F RK21_RS24725 PF01029 NusB family RK21_RS24730 PF02911 Formyl transferase, C-terminal domain RK21_RS24730 PF00551 Formyl transferase RK21_RS24735 PF01327 Polypeptide deformylase RK21_RS24740 PF02481 DNA recombination-mediator protein A RK21_RS24740 PF17782 DprA winged helix domain RK21_RS24745 PF01300 Telomere recombination RK21_RS24755 PF00107 Zinc-binding dehydrogenase RK21_RS24755 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS24760 PF01218 Coproporphyrinogen III oxidase RK21_RS24765 PF08501 Shikimate dehydrogenase substrate binding domain RK21_RS24765 PF01488 Shikimate / quinate 5-dehydrogenase RK21_RS24765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RK21_RS24770 PF00916 Sulfate permease family RK21_RS24770 PF01740 STAS domain RK21_RS24775 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RK21_RS24780 PF00884 Sulfatase RK21_RS24780 PF12411 Choline sulfatase enzyme C terminal RK21_RS24785 PF03466 LysR substrate binding domain RK21_RS24785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS24800 PF00290 Tryptophan synthase alpha chain RK21_RS24805 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS24810 PF03466 LysR substrate binding domain RK21_RS24810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS24820 PF07311 Dodecin RK21_RS24830 PF00296 Luciferase-like monooxygenase RK21_RS24835 PF02566 OsmC-like protein RK21_RS24860 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS24865 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS24870 PF01432 Peptidase family M3 RK21_RS24875 PF09526 Probable metal-binding protein (DUF2387) RK21_RS24880 PF01432 Peptidase family M3 RK21_RS24885 PF04055 Radical SAM superfamily RK21_RS24890 PF00484 Carbonic anhydrase RK21_RS24895 PF01740 STAS domain RK21_RS24895 PF00916 Sulfate permease family RK21_RS24905 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RK21_RS24905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RK21_RS24910 PF00115 Cytochrome C and Quinol oxidase polypeptide I RK21_RS24915 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RK21_RS24920 PF00510 Cytochrome c oxidase subunit III RK21_RS24930 PF02104 SURF1 family RK21_RS24940 PF02628 Cytochrome oxidase assembly protein RK21_RS24945 PF01040 UbiA prenyltransferase family RK21_RS24950 PF02630 SCO1/SenC RK21_RS24955 PF03180 NLPA lipoprotein RK21_RS24960 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS24965 PF09383 NIL domain RK21_RS24965 PF00005 ABC transporter RK21_RS24970 PF00199 Catalase RK21_RS24970 PF06628 Catalase-related immune-responsive RK21_RS24970 PF18011 C-terminal domain found in long catalases RK21_RS24980 PF00950 ABC 3 transport family RK21_RS24985 PF00005 ABC transporter RK21_RS24990 PF01475 Ferric uptake regulator family RK21_RS24995 PF01297 Zinc-uptake complex component A periplasmic RK21_RS25000 PF01636 Phosphotransferase enzyme family RK21_RS25010 PF00476 DNA polymerase family A RK21_RS25010 PF01612 3'-5' exonuclease RK21_RS25010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RK21_RS25010 PF01367 5'-3' exonuclease, C-terminal SAM fold RK21_RS25015 PF01926 50S ribosome-binding GTPase RK21_RS25020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RK21_RS25025 PF00034 Cytochrome c RK21_RS25030 PF01323 DSBA-like thioredoxin domain RK21_RS25040 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS25045 PF01510 N-acetylmuramoyl-L-alanine amidase RK21_RS25050 PF12792 CSS motif domain associated with EAL RK21_RS25050 PF00563 EAL domain RK21_RS25055 PF00672 HAMP domain RK21_RS25055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS25055 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS25055 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB RK21_RS25055 PF08448 PAS fold RK21_RS25060 PF00072 Response regulator receiver domain RK21_RS25060 PF00158 Sigma-54 interaction domain RK21_RS25060 PF02954 Bacterial regulatory protein, Fis family RK21_RS25085 PF00375 Sodium:dicarboxylate symporter family RK21_RS25090 PF07670 Nucleoside recognition RK21_RS25105 PF00005 ABC transporter RK21_RS25110 PF02405 Permease MlaE RK21_RS25125 PF02690 Na+/Pi-cotransporter RK21_RS25130 PF03741 Integral membrane protein TerC family RK21_RS25135 PF03600 Citrate transporter RK21_RS25170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain RK21_RS25170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain RK21_RS25175 PF02233 NAD(P) transhydrogenase beta subunit RK21_RS25180 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RK21_RS25185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RK21_RS25185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RK21_RS25190 PF03466 LysR substrate binding domain RK21_RS25190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS25195 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS25195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS25195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS25200 PF02515 CoA-transferase family III RK21_RS25250 PF00593 TonB dependent receptor RK21_RS25250 PF07715 TonB-dependent Receptor Plug Domain RK21_RS25265 PF00392 Bacterial regulatory proteins, gntR family RK21_RS25265 PF07729 FCD domain RK21_RS25275 PF00563 EAL domain RK21_RS25275 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS25275 PF03707 Bacterial signalling protein N terminal repeat RK21_RS25275 PF13188 PAS domain RK21_RS25280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RK21_RS25280 PF00529 HlyD membrane-fusion protein of T1SS RK21_RS25285 PF03412 Peptidase C39 family RK21_RS25285 PF00005 ABC transporter RK21_RS25285 PF00664 ABC transporter transmembrane region RK21_RS25300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RK21_RS25310 PF00005 ABC transporter RK21_RS25315 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25360 PF04632 Fusaric acid resistance protein family RK21_RS25370 PF13533 Biotin-lipoyl like RK21_RS25375 PF02321 Outer membrane efflux protein RK21_RS25390 PF03239 Iron permease FTR1 family RK21_RS25405 PF13417 Glutathione S-transferase, N-terminal domain RK21_RS25405 PF14497 Glutathione S-transferase, C-terminal domain RK21_RS25410 PF00206 Lyase RK21_RS25410 PF14698 Argininosuccinate lyase C-terminal RK21_RS25415 PF00072 Response regulator receiver domain RK21_RS25415 PF04397 LytTr DNA-binding domain RK21_RS25420 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RK21_RS25420 PF03900 Porphobilinogen deaminase, C-terminal domain RK21_RS25425 PF02602 Uroporphyrinogen-III synthase HemD RK21_RS25440 PF02600 Disulfide bond formation protein DsbB RK21_RS25445 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ RK21_RS25450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase RK21_RS25450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RK21_RS25465 PF00005 ABC transporter RK21_RS25465 PF12848 ABC transporter RK21_RS25475 PF01810 LysE type translocator RK21_RS25480 PF01145 SPFH domain / Band 7 family RK21_RS25535 PF00171 Aldehyde dehydrogenase family RK21_RS25540 PF00202 Aminotransferase class-III RK21_RS25545 PF00486 Transcriptional regulatory protein, C terminal RK21_RS25545 PF00072 Response regulator receiver domain RK21_RS25550 PF08448 PAS fold RK21_RS25550 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS25560 PF03707 Bacterial signalling protein N terminal repeat RK21_RS25560 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS25560 PF00563 EAL domain RK21_RS25565 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25570 PF00005 ABC transporter RK21_RS25570 PF09383 NIL domain RK21_RS25575 PF03180 NLPA lipoprotein RK21_RS25580 PF00296 Luciferase-like monooxygenase RK21_RS25585 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS25585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS25585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS25590 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS25590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS25595 PF00005 ABC transporter RK21_RS25600 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25605 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS25610 PF00132 Bacterial transferase hexapeptide (six repeats) RK21_RS25615 PF02028 BCCT, betaine/carnitine/choline family transporter RK21_RS25620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family RK21_RS25625 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25630 PF00005 ABC transporter RK21_RS25635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RK21_RS25640 PF03573 outer membrane porin, OprD family RK21_RS25645 PF00578 AhpC/TSA family RK21_RS25645 PF10417 C-terminal domain of 1-Cys peroxiredoxin RK21_RS25650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) RK21_RS25655 PF03358 NADPH-dependent FMN reductase RK21_RS25660 PF09084 NMT1/THI5 like RK21_RS25665 PF00296 Luciferase-like monooxygenase RK21_RS25670 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25675 PF00005 ABC transporter RK21_RS25680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS25680 PF03459 TOBE domain RK21_RS25690 PF04262 Glutamate-cysteine ligase RK21_RS25700 PF17674 HHH domain RK21_RS25700 PF00575 S1 RNA binding domain RK21_RS25700 PF09371 Tex-like protein N-terminal domain RK21_RS25700 PF16921 Tex protein YqgF-like domain RK21_RS25705 PF00072 Response regulator receiver domain RK21_RS25705 PF00486 Transcriptional regulatory protein, C terminal RK21_RS25710 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS25710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS25710 PF00672 HAMP domain RK21_RS25730 PF04463 Protein of unknown function (DUF523) RK21_RS25745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RK21_RS25745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK21_RS25745 PF01842 ACT domain RK21_RS25750 PF01565 FAD binding domain RK21_RS25750 PF02913 FAD linked oxidases, C-terminal domain RK21_RS25755 PF01557 Fumarylacetoacetate (FAA) hydrolase family RK21_RS25760 PF06977 SdiA-regulated RK21_RS25765 PF06977 SdiA-regulated RK21_RS25770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RK21_RS25775 PF00585 C-terminal regulatory domain of Threonine dehydratase RK21_RS25775 PF00291 Pyridoxal-phosphate dependent enzyme RK21_RS25790 PF00293 NUDIX domain RK21_RS25795 PF01590 GAF domain RK21_RS25795 PF05524 PEP-utilising enzyme, N-terminal RK21_RS25795 PF00391 PEP-utilising enzyme, mobile domain RK21_RS25795 PF02896 PEP-utilising enzyme, TIM barrel domain RK21_RS25805 PF01925 Sulfite exporter TauE/SafE RK21_RS25810 PF01790 Prolipoprotein diacylglyceryl transferase RK21_RS25815 PF00303 Thymidylate synthase RK21_RS25820 PF13411 MerR HTH family regulatory protein RK21_RS25825 PF00403 Heavy-metal-associated domain RK21_RS25830 PF03466 LysR substrate binding domain RK21_RS25830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS25835 PF08402 TOBE domain RK21_RS25835 PF00005 ABC transporter RK21_RS25840 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS25850 PF01966 HD domain RK21_RS25860 PF12631 MnmE helical domain RK21_RS25860 PF01926 50S ribosome-binding GTPase RK21_RS25860 PF10396 GTP-binding protein TrmE N-terminus RK21_RS25870 PF00186 Dihydrofolate reductase RK21_RS25875 PF00375 Sodium:dicarboxylate symporter family RK21_RS25885 PF02525 Flavodoxin-like fold RK21_RS25890 PF03466 LysR substrate binding domain RK21_RS25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS25895 PF00920 Dehydratase family RK21_RS25900 PF17785 PUA-like domain RK21_RS25900 PF10672 S-adenosylmethionine-dependent methyltransferase RK21_RS25905 PF01965 DJ-1/PfpI family RK21_RS25915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RK21_RS25915 PF06827 Zinc finger found in FPG and IleRS RK21_RS25915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RK21_RS25920 PF00037 4Fe-4S binding domain RK21_RS25925 PF01467 Cytidylyltransferase-like RK21_RS25930 PF00732 GMC oxidoreductase RK21_RS25930 PF05199 GMC oxidoreductase RK21_RS25940 PF00171 Aldehyde dehydrogenase family RK21_RS25950 PF00581 Rhodanese-like domain RK21_RS25960 PF05193 Peptidase M16 inactive domain RK21_RS25975 PF05193 Peptidase M16 inactive domain RK21_RS25980 PF05193 Peptidase M16 inactive domain RK21_RS25980 PF00675 Insulinase (Peptidase family M16) RK21_RS25985 PF00448 SRP54-type protein, GTPase domain RK21_RS25985 PF02881 SRP54-type protein, helical bundle domain RK21_RS25990 PF00005 ABC transporter RK21_RS25995 PF18075 FtsX extracellular domain RK21_RS26000 PF00140 Sigma-70 factor, region 1.2 RK21_RS26000 PF04542 Sigma-70 region 2 RK21_RS26000 PF04545 Sigma-70, region 4 RK21_RS26005 PF00912 Transglycosylase RK21_RS26010 PF04241 Protein of unknown function (DUF423) RK21_RS26015 PF05690 Thiazole biosynthesis protein ThiG RK21_RS26015 PF02597 ThiS family RK21_RS26020 PF05690 Thiazole biosynthesis protein ThiG RK21_RS26025 PF02390 Putative methyltransferase RK21_RS26035 PF04055 Radical SAM superfamily RK21_RS26035 PF06969 HemN C-terminal domain RK21_RS26040 PF01725 Ham1 family RK21_RS26050 PF00561 alpha/beta hydrolase fold RK21_RS26050 PF07021 Methionine biosynthesis protein MetW RK21_RS26055 PF00561 alpha/beta hydrolase fold RK21_RS26060 PF02325 YGGT family RK21_RS26065 PF03807 NADP oxidoreductase coenzyme F420-dependent RK21_RS26065 PF14748 Pyrroline-5-carboxylate reductase dimerisation RK21_RS26070 PF01168 Alanine racemase, N-terminal domain RK21_RS26075 PF00437 Type II/IV secretion system protein RK21_RS26080 PF00877 NlpC/P60 family RK21_RS26095 PF03485 Arginyl tRNA synthetase N terminal domain RK21_RS26095 PF00750 tRNA synthetases class I (R) RK21_RS26095 PF05746 DALR anticodon binding domain RK21_RS26100 PF00271 Helicase conserved C-terminal domain RK21_RS26100 PF18074 Primosomal protein N C-terminal domain RK21_RS26100 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RK21_RS26100 PF00270 DEAD/DEAH box helicase RK21_RS26100 PF17764 3′ DNA-binding domain (3′BD) RK21_RS26105 PF01197 Ribosomal protein L31 RK21_RS26115 PF03949 Malic enzyme, NAD binding domain RK21_RS26115 PF00390 Malic enzyme, N-terminal domain RK21_RS26120 PF00912 Transglycosylase RK21_RS26120 PF17092 Penicillin-binding protein OB-like domain RK21_RS26120 PF00905 Penicillin binding protein transpeptidase domain RK21_RS26125 PF11104 Type IV pilus assembly protein PilM; RK21_RS26140 PF00263 Bacterial type II and III secretion system protein RK21_RS26140 PF11741 AMIN domain RK21_RS26140 PF03958 Bacterial type II/III secretion system short domain RK21_RS26140 PF07660 Secretin and TonB N terminus short domain RK21_RS26145 PF01202 Shikimate kinase RK21_RS26150 PF01761 3-dehydroquinate synthase RK21_RS26160 PF01493 GXGXG motif RK21_RS26160 PF04898 Glutamate synthase central domain RK21_RS26160 PF00310 Glutamine amidotransferases class-II RK21_RS26160 PF01645 Conserved region in glutamate synthase RK21_RS26165 PF07992 Pyridine nucleotide-disulphide oxidoreductase RK21_RS26165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RK21_RS26170 PF01208 Uroporphyrinogen decarboxylase (URO-D) RK21_RS26180 PF07690 Major Facilitator Superfamily RK21_RS26185 PF03466 LysR substrate binding domain RK21_RS26185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS26190 PF13614 AAA domain RK21_RS26195 PF00085 Thioredoxin RK21_RS26200 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RK21_RS26205 PF00924 Mechanosensitive ion channel RK21_RS26205 PF12795 Mechanosensitive ion channel porin domain RK21_RS26205 PF12794 Mechanosensitive ion channel inner membrane domain 1 RK21_RS26210 PF03471 Transporter associated domain RK21_RS26210 PF02080 TrkA-C domain RK21_RS26210 PF00999 Sodium/hydrogen exchanger family RK21_RS26215 PF05199 GMC oxidoreductase RK21_RS26215 PF00732 GMC oxidoreductase RK21_RS26220 PF00171 Aldehyde dehydrogenase family RK21_RS26225 PF13977 BetI-type transcriptional repressor, C-terminal RK21_RS26225 PF00440 Bacterial regulatory proteins, tetR family RK21_RS26230 PF02028 BCCT, betaine/carnitine/choline family transporter RK21_RS26240 PF04748 Divergent polysaccharide deacetylase RK21_RS26245 PF13180 PDZ domain RK21_RS26245 PF03572 Peptidase family S41 RK21_RS26250 PF01551 Peptidase family M23 RK21_RS26255 PF01676 Metalloenzyme superfamily RK21_RS26255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RK21_RS26260 PF00581 Rhodanese-like domain RK21_RS26265 PF00462 Glutaredoxin RK21_RS26270 PF02556 Preprotein translocase subunit SecB RK21_RS26275 PF00588 SpoU rRNA Methylase family RK21_RS26285 PF00158 Sigma-54 interaction domain RK21_RS26285 PF02954 Bacterial regulatory protein, Fis family RK21_RS26285 PF00072 Response regulator receiver domain RK21_RS26290 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS26290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS26290 PF00989 PAS fold RK21_RS26300 PF00120 Glutamine synthetase, catalytic domain RK21_RS26300 PF03951 Glutamine synthetase, beta-Grasp domain RK21_RS26305 PF02568 Thiamine biosynthesis protein (ThiI) RK21_RS26305 PF02926 THUMP domain RK21_RS26310 PF03144 Elongation factor Tu domain 2 RK21_RS26310 PF00679 Elongation factor G C-terminus RK21_RS26310 PF00009 Elongation factor Tu GTP binding domain RK21_RS26325 PF00343 Carbohydrate phosphorylase RK21_RS26330 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RK21_RS26350 PF01979 Amidohydrolase family RK21_RS26355 PF00392 Bacterial regulatory proteins, gntR family RK21_RS26355 PF07702 UTRA domain RK21_RS26360 PF05962 HutD RK21_RS26365 PF01175 Urocanase Rossmann-like domain RK21_RS26365 PF17391 Urocanase N-terminal domain RK21_RS26365 PF17392 Urocanase C-terminal domain RK21_RS26370 PF00221 Aromatic amino acid lyase RK21_RS26375 PF00324 Amino acid permease RK21_RS26380 PF01979 Amidohydrolase family RK21_RS26395 PF00561 alpha/beta hydrolase fold RK21_RS26400 PF02580 D-Tyr-tRNA(Tyr) deacylase RK21_RS26405 PF04349 Periplasmic glucan biosynthesis protein, MdoG RK21_RS26410 PF00535 Glycosyl transferase family 2 RK21_RS26415 PF00497 Bacterial extracellular solute-binding proteins, family 3 RK21_RS26420 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS26425 PF00005 ABC transporter RK21_RS26430 PF00672 HAMP domain RK21_RS26430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS26430 PF16591 Helical bimodular sensor domain RK21_RS26435 PF16591 Helical bimodular sensor domain RK21_RS26435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS26435 PF00672 HAMP domain RK21_RS26445 PF00902 Sec-independent protein translocase protein (TatC) RK21_RS26450 PF02416 mttA/Hcf106 family RK21_RS26455 PF02416 mttA/Hcf106 family RK21_RS26460 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RK21_RS26465 PF01502 Phosphoribosyl-AMP cyclohydrolase RK21_RS26470 PF03109 ABC1 family RK21_RS26480 PF01209 ubiE/COQ5 methyltransferase family RK21_RS26505 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RK21_RS26510 PF00561 alpha/beta hydrolase fold RK21_RS26515 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RK21_RS26525 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS26525 PF07724 AAA domain (Cdc48 subfamily) RK21_RS26530 PF00227 Proteasome subunit RK21_RS26535 PF01979 Amidohydrolase family RK21_RS26540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RK21_RS26540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RK21_RS26545 PF00156 Phosphoribosyl transferase domain RK21_RS26550 PF03652 Holliday junction resolvase RK21_RS26555 PF02622 Uncharacterized ACR, COG1678 RK21_RS26565 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RK21_RS26565 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RK21_RS26570 PF00072 Response regulator receiver domain RK21_RS26575 PF00072 Response regulator receiver domain RK21_RS26580 PF01584 CheW-like domain RK21_RS26585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS26585 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term RK21_RS26590 PF01584 CheW-like domain RK21_RS26590 PF02895 Signal transducing histidine kinase, homodimeric domain RK21_RS26590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS26590 PF01627 Hpt domain RK21_RS26590 PF00072 Response regulator receiver domain RK21_RS26600 PF03006 Haemolysin-III related RK21_RS26605 PF04452 RNA methyltransferase RK21_RS26610 PF00202 Aminotransferase class-III RK21_RS26615 PF01593 Flavin containing amine oxidoreductase RK21_RS26620 PF01292 Prokaryotic cytochrome b561 RK21_RS26625 PF04264 YceI-like domain RK21_RS26630 PF00271 Helicase conserved C-terminal domain RK21_RS26630 PF00270 DEAD/DEAH box helicase RK21_RS26645 PF02219 Methylenetetrahydrofolate reductase RK21_RS26650 PF05221 S-adenosyl-L-homocysteine hydrolase RK21_RS26650 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RK21_RS26660 PF00999 Sodium/hydrogen exchanger family RK21_RS26690 PF03120 NAD-dependent DNA ligase OB-fold domain RK21_RS26690 PF01653 NAD-dependent DNA ligase adenylation domain RK21_RS26695 PF02772 S-adenosylmethionine synthetase, central domain RK21_RS26695 PF00438 S-adenosylmethionine synthetase, N-terminal domain RK21_RS26695 PF02773 S-adenosylmethionine synthetase, C-terminal domain RK21_RS26700 PF01022 Bacterial regulatory protein, arsR family RK21_RS26705 PF00456 Transketolase, thiamine diphosphate binding domain RK21_RS26705 PF02779 Transketolase, pyrimidine binding domain RK21_RS26705 PF02780 Transketolase, C-terminal domain RK21_RS26710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RK21_RS26710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK21_RS26715 PF00162 Phosphoglycerate kinase RK21_RS26730 PF01116 Fructose-bisphosphate aldolase class-II RK21_RS26735 PF00990 Diguanylate cyclase, GGDEF domain RK21_RS26735 PF03707 Bacterial signalling protein N terminal repeat RK21_RS26735 PF00563 EAL domain RK21_RS26735 PF13188 PAS domain RK21_RS26740 PF01863 Protein of unknown function DUF45 RK21_RS26750 PF13673 Acetyltransferase (GNAT) domain RK21_RS26760 PF12805 FUSC-like inner membrane protein yccS RK21_RS26770 PF00271 Helicase conserved C-terminal domain RK21_RS26770 PF03880 DbpA RNA binding domain RK21_RS26770 PF00270 DEAD/DEAH box helicase RK21_RS26775 PF07690 Major Facilitator Superfamily RK21_RS26780 PF01523 Putative modulator of DNA gyrase RK21_RS26790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS26790 PF12806 Acetyl-CoA dehydrogenase C-terminal like RK21_RS26790 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS26790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RK21_RS26805 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RK21_RS26805 PF00171 Aldehyde dehydrogenase family RK21_RS26805 PF01619 Proline dehydrogenase RK21_RS26805 PF14850 DNA-binding domain of Proline dehydrogenase RK21_RS26810 PF00474 Sodium:solute symporter family RK21_RS26815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RK21_RS26820 PF02543 Carbamoyltransferase N-terminus RK21_RS26820 PF16861 Carbamoyltransferase C-terminus RK21_RS26825 PF13439 Glycosyltransferase Family 4 RK21_RS26850 PF00534 Glycosyl transferases group 1 RK21_RS26850 PF13439 Glycosyltransferase Family 4 RK21_RS26865 PF00005 ABC transporter RK21_RS26865 PF00664 ABC transporter transmembrane region RK21_RS26870 PF01467 Cytidylyltransferase-like RK21_RS26870 PF00294 pfkB family carbohydrate kinase RK21_RS26880 PF00248 Aldo/keto reductase family RK21_RS26885 PF01266 FAD dependent oxidoreductase RK21_RS26890 PF00893 Small Multidrug Resistance protein RK21_RS26895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS26895 PF03466 LysR substrate binding domain RK21_RS26900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RK21_RS26920 PF02321 Outer membrane efflux protein RK21_RS26925 PF13667 ThiC-associated domain RK21_RS26925 PF01964 Radical SAM ThiC family RK21_RS26940 PF00293 NUDIX domain RK21_RS26950 PF00149 Calcineurin-like phosphoesterase RK21_RS26955 PF05728 Uncharacterised protein family (UPF0227) RK21_RS26960 PF00204 DNA gyrase B RK21_RS26960 PF00986 DNA gyrase B subunit, carboxyl terminus RK21_RS26960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS26960 PF01751 Toprim domain RK21_RS26975 PF00521 DNA gyrase/topoisomerase IV, subunit A RK21_RS26975 PF03989 DNA gyrase C-terminal domain, beta-propeller RK21_RS26995 PF02666 Phosphatidylserine decarboxylase RK21_RS27000 PF00581 Rhodanese-like domain RK21_RS27010 PF01618 MotA/TolQ/ExbB proton channel family RK21_RS27015 PF13677 Membrane MotB of proton-channel complex MotA/MotB RK21_RS27015 PF00691 OmpA family RK21_RS27020 PF03193 RsgA GTPase RK21_RS27025 PF00929 Exonuclease RK21_RS27030 PF03458 UPF0126 domain RK21_RS27035 PF08331 Domain of unknown function (DUF1730) RK21_RS27040 PF03853 YjeF-related protein N-terminus RK21_RS27040 PF01256 Carbohydrate kinase RK21_RS27045 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RK21_RS27050 PF01520 N-acetylmuramoyl-L-alanine amidase RK21_RS27050 PF11741 AMIN domain RK21_RS27055 PF01119 DNA mismatch repair protein, C-terminal domain RK21_RS27055 PF08676 MutL C terminal dimerisation domain RK21_RS27065 PF17209 Hfq protein RK21_RS27070 PF13167 GTP-binding GTPase N-terminal RK21_RS27070 PF16360 GTP-binding GTPase Middle Region RK21_RS27070 PF01926 50S ribosome-binding GTPase RK21_RS27075 PF01145 SPFH domain / Band 7 family RK21_RS27080 PF01145 SPFH domain / Band 7 family RK21_RS27085 PF13393 Histidyl-tRNA synthetase RK21_RS27090 PF00709 Adenylosuccinate synthetase RK21_RS27095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RK21_RS27095 PF00672 HAMP domain RK21_RS27095 PF02743 Cache domain RK21_RS27125 PF00665 Integrase core domain RK21_RS27125 PF13936 Helix-turn-helix domain RK21_RS27135 PF00528 Binding-protein-dependent transport system inner membrane component RK21_RS27140 PF01547 Bacterial extracellular solute-binding protein RK21_RS27155 PF08461 Ribonuclease R winged-helix domain RK21_RS27155 PF08206 Ribonuclease B OB domain RK21_RS27155 PF17876 Cold shock domain RK21_RS27155 PF00575 S1 RNA binding domain RK21_RS27155 PF00773 RNB domain RK21_RS27160 PF08032 RNA 2'-O ribose methyltransferase substrate binding RK21_RS27160 PF00588 SpoU rRNA Methylase family RK21_RS27165 PF01250 Ribosomal protein S6 RK21_RS27170 PF01084 Ribosomal protein S18 RK21_RS27180 PF03948 Ribosomal protein L9, C-terminal domain RK21_RS27180 PF01281 Ribosomal protein L9, N-terminal domain RK21_RS27185 PF03796 DnaB-like helicase C terminal domain RK21_RS27185 PF00772 DnaB-like helicase N terminal domain RK21_RS27190 PF04055 Radical SAM superfamily RK21_RS27190 PF08497 Radical SAM N-terminal RK21_RS27190 PF11842 Domain of unknown function (DUF3362) RK21_RS27195 PF03641 Possible lysine decarboxylase RK21_RS27200 PF00127 Copper binding proteins, plastocyanin/azurin family RK21_RS27205 PF02540 NAD synthase RK21_RS27210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RK21_RS27210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RK21_RS27215 PF13458 Periplasmic binding protein RK21_RS27220 PF02653 Branched-chain amino acid transport system / permease component RK21_RS27225 PF11862 Domain of unknown function (DUF3382) RK21_RS27225 PF02653 Branched-chain amino acid transport system / permease component RK21_RS27230 PF00005 ABC transporter RK21_RS27230 PF12399 Branched-chain amino acid ATP-binding cassette transporter RK21_RS27235 PF00005 ABC transporter RK21_RS27240 PF00106 short chain dehydrogenase RK21_RS27250 PF00440 Bacterial regulatory proteins, tetR family RK21_RS27260 PF05170 AsmA family RK21_RS27275 PF00561 alpha/beta hydrolase fold RK21_RS27290 PF07769 psiF repeat RK21_RS27300 PF00012 Hsp70 protein RK21_RS27305 PF00226 DnaJ domain RK21_RS27305 PF01556 DnaJ C terminal domain RK21_RS27320 PF00005 ABC transporter RK21_RS27325 PF00005 ABC transporter RK21_RS27325 PF12399 Branched-chain amino acid ATP-binding cassette transporter RK21_RS27335 PF02653 Branched-chain amino acid transport system / permease component RK21_RS27340 PF02954 Bacterial regulatory protein, Fis family RK21_RS27340 PF13188 PAS domain RK21_RS27340 PF00158 Sigma-54 interaction domain RK21_RS27345 PF00324 Amino acid permease RK21_RS27355 PF00593 TonB dependent receptor RK21_RS27355 PF07715 TonB-dependent Receptor Plug Domain RK21_RS27375 PF01145 SPFH domain / Band 7 family RK21_RS27375 PF16200 C-terminal region of band_7 RK21_RS27385 PF02571 Precorrin-6x reductase CbiJ/CobK RK21_RS27390 PF01888 CbiD RK21_RS27395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS27400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RK21_RS27400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RK21_RS27405 PF02570 Precorrin-8X methylmutase RK21_RS27410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS27415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RK21_RS27430 PF01914 MarC family integral membrane protein RK21_RS27435 PF01627 Hpt domain RK21_RS27435 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS27435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS27435 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS27435 PF00072 Response regulator receiver domain RK21_RS27435 PF00672 HAMP domain RK21_RS27440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RK21_RS27440 PF02843 Phosphoribosylglycinamide synthetase, C domain RK21_RS27440 PF02844 Phosphoribosylglycinamide synthetase, N domain RK21_RS27445 PF01808 AICARFT/IMPCHase bienzyme RK21_RS27445 PF02142 MGS-like domain RK21_RS27450 PF02954 Bacterial regulatory protein, Fis family RK21_RS27455 PF01207 Dihydrouridine synthase (Dus) RK21_RS27470 PF01575 MaoC like domain RK21_RS27480 PF04172 LrgB-like family RK21_RS27490 PF09335 SNARE associated Golgi protein RK21_RS27495 PF02245 Methylpurine-DNA glycosylase (MPG) RK21_RS27500 PF00171 Aldehyde dehydrogenase family RK21_RS27505 PF01467 Cytidylyltransferase-like RK21_RS27515 PF02590 Predicted SPOUT methyltransferase RK21_RS27520 PF03717 Penicillin-binding Protein dimerisation domain RK21_RS27520 PF00905 Penicillin binding protein transpeptidase domain RK21_RS27525 PF01098 Cell cycle protein RK21_RS27530 PF13406 Transglycosylase SLT domain RK21_RS27535 PF05036 Sporulation related domain RK21_RS27535 PF03330 Lytic transglycolase RK21_RS27540 PF07943 Penicillin-binding protein 5, C-terminal domain RK21_RS27540 PF00768 D-alanyl-D-alanine carboxypeptidase RK21_RS27545 PF04359 Protein of unknown function (DUF493) RK21_RS27550 PF03099 Biotin/lipoate A/B protein ligase family RK21_RS27555 PF04055 Radical SAM superfamily RK21_RS27555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RK21_RS27560 PF02016 LD-carboxypeptidase N-terminal domain RK21_RS27560 PF17676 LD-carboxypeptidase C-terminal domain RK21_RS27565 PF13406 Transglycosylase SLT domain RK21_RS27585 PF13603 Leucyl-tRNA synthetase, Domain 2 RK21_RS27585 PF00133 tRNA synthetases class I (I, L, M and V) RK21_RS27585 PF09334 tRNA synthetases class I (M) RK21_RS27585 PF08264 Anticodon-binding domain of tRNA RK21_RS27600 PF00795 Carbon-nitrogen hydrolase RK21_RS27605 PF00571 CBS domain RK21_RS27605 PF03471 Transporter associated domain RK21_RS27610 PF02130 Uncharacterized protein family UPF0054 RK21_RS27615 PF02562 PhoH-like protein RK21_RS27630 PF00202 Aminotransferase class-III RK21_RS27635 PF02581 Thiamine monophosphate synthase RK21_RS27640 PF08543 Phosphomethylpyrimidine kinase RK21_RS27645 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS27645 PF01627 Hpt domain RK21_RS27645 PF00072 Response regulator receiver domain RK21_RS27645 PF00672 HAMP domain RK21_RS27645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS27645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RK21_RS27660 PF18158 Adaptive response protein AidB N-terminal domain RK21_RS27660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RK21_RS27660 PF02770 Acyl-CoA dehydrogenase, middle domain RK21_RS27665 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RK21_RS27665 PF01048 Phosphorylase superfamily RK21_RS27670 PF00849 RNA pseudouridylate synthase RK21_RS27680 PF01037 Lrp/AsnC ligand binding domain RK21_RS27680 PF13404 AsnC-type helix-turn-helix domain RK21_RS27690 PF01545 Cation efflux family RK21_RS27690 PF16916 Dimerisation domain of Zinc Transporter RK21_RS27700 PF00271 Helicase conserved C-terminal domain RK21_RS27700 PF04408 Helicase associated domain (HA2) RK21_RS27700 PF00270 DEAD/DEAH box helicase RK21_RS27700 PF08482 ATP-dependent helicase C-terminal RK21_RS27715 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) RK21_RS27725 PF00929 Exonuclease RK21_RS27730 PF01037 Lrp/AsnC ligand binding domain RK21_RS27730 PF13404 AsnC-type helix-turn-helix domain RK21_RS27735 PF00892 EamA-like transporter family RK21_RS27740 PF00270 DEAD/DEAH box helicase RK21_RS27740 PF00271 Helicase conserved C-terminal domain RK21_RS27750 PF00850 Histone deacetylase domain RK21_RS27755 PF00300 Histidine phosphatase superfamily (branch 1) RK21_RS27760 PF13302 Acetyltransferase (GNAT) domain RK21_RS27770 PF13419 Haloacid dehalogenase-like hydrolase RK21_RS27775 PF02801 Beta-ketoacyl synthase, C-terminal domain RK21_RS27775 PF16197 Ketoacyl-synthetase C-terminal extension RK21_RS27775 PF00109 Beta-ketoacyl synthase, N-terminal domain RK21_RS27775 PF00698 Acyl transferase domain RK21_RS27775 PF08659 KR domain RK21_RS27775 PF08240 Alcohol dehydrogenase GroES-like domain RK21_RS27775 PF00550 Phosphopantetheine attachment site RK21_RS27775 PF14765 Polyketide synthase dehydratase RK21_RS27780 PF07729 FCD domain RK21_RS27780 PF00392 Bacterial regulatory proteins, gntR family RK21_RS27785 PF07690 Major Facilitator Superfamily RK21_RS27790 PF13378 Enolase C-terminal domain-like RK21_RS27790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RK21_RS27795 PF00324 Amino acid permease RK21_RS27800 PF03466 LysR substrate binding domain RK21_RS27800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RK21_RS27805 PF07690 Major Facilitator Superfamily RK21_RS27815 PF12167 Arm DNA-binding domain RK21_RS27815 PF00589 Phage integrase family RK21_RS27890 PF01695 IstB-like ATP binding protein RK21_RS27895 PF03796 DnaB-like helicase C terminal domain RK21_RS27895 PF00772 DnaB-like helicase N terminal domain RK21_RS27920 PF09411 Lipid A 3-O-deacylase (PagL) RK21_RS27960 PF03354 Phage Terminase RK21_RS28095 PF01070 FMN-dependent dehydrogenase RK21_RS28100 PF02652 L-lactate permease RK21_RS28105 PF07729 FCD domain RK21_RS28105 PF00392 Bacterial regulatory proteins, gntR family RK21_RS28110 PF01668 SmpB protein RK21_RS28115 PF03364 Polyketide cyclase / dehydrase and lipid transport RK21_RS28120 PF04355 SmpA / OmlA family RK21_RS28125 PF01475 Ferric uptake regulator family RK21_RS28130 PF02463 RecF/RecN/SMC N terminal domain RK21_RS28135 PF01025 GrpE RK21_RS28140 PF00012 Hsp70 protein RK21_RS28145 PF00226 DnaJ domain RK21_RS28145 PF00684 DnaJ central domain RK21_RS28145 PF01556 DnaJ C terminal domain RK21_RS28150 PF05173 Dihydrodipicolinate reductase, C-terminus RK21_RS28150 PF01113 Dihydrodipicolinate reductase, N-terminus RK21_RS28155 PF00117 Glutamine amidotransferase class-I RK21_RS28155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RK21_RS28160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RK21_RS28160 PF02142 MGS-like domain RK21_RS28160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RK21_RS28165 PF03449 Transcription elongation factor, N-terminal RK21_RS28165 PF01272 Transcription elongation factor, GreA/GreB, C-term RK21_RS28175 PF01985 CRS1 / YhbY (CRM) domain RK21_RS28180 PF01728 FtsJ-like methyltransferase RK21_RS28185 PF06480 FtsH Extracellular RK21_RS28185 PF17862 AAA+ lid domain RK21_RS28185 PF01434 Peptidase family M41 RK21_RS28185 PF00004 ATPase family associated with various cellular activities (AAA) RK21_RS28190 PF00809 Pterin binding enzyme RK21_RS28195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RK21_RS28195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RK21_RS28195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RK21_RS28195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RK21_RS28200 PF00121 Triosephosphate isomerase RK21_RS28205 PF03840 Preprotein translocase SecG subunit RK21_RS28220 PF17384 RimP C-terminal SH3 domain RK21_RS28220 PF02576 RimP N-terminal domain RK21_RS28225 PF13184 NusA-like KH domain RK21_RS28225 PF08529 NusA N-terminal domain RK21_RS28225 PF00575 S1 RNA binding domain RK21_RS28230 PF11987 Translation-initiation factor 2 RK21_RS28230 PF00009 Elongation factor Tu GTP binding domain RK21_RS28230 PF08364 Bacterial translation initiation factor IF-2 associated region RK21_RS28230 PF04760 Translation initiation factor IF-2, N-terminal region RK21_RS28235 PF02033 Ribosome-binding factor A RK21_RS28240 PF09157 Pseudouridine synthase II TruB, C-terminal RK21_RS28240 PF16198 tRNA pseudouridylate synthase B C-terminal domain RK21_RS28240 PF01509 TruB family pseudouridylate synthase (N terminal domain) RK21_RS28245 PF00312 Ribosomal protein S15 RK21_RS28250 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RK21_RS28250 PF00013 KH domain RK21_RS28250 PF01138 3' exoribonuclease family, domain 1 RK21_RS28250 PF03725 3' exoribonuclease family, domain 2 RK21_RS28250 PF00575 S1 RNA binding domain RK21_RS28255 PF04972 BON domain RK21_RS28280 PF16177 Acetyl-coenzyme A synthetase N-terminus RK21_RS28280 PF13193 AMP-binding enzyme C-terminal domain RK21_RS28280 PF00501 AMP-binding enzyme RK21_RS28285 PF00342 Phosphoglucose isomerase RK21_RS28290 PF02569 Pantoate-beta-alanine ligase RK21_RS28295 PF02548 Ketopantoate hydroxymethyltransferase RK21_RS28300 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RK21_RS28305 PF01743 Poly A polymerase head domain RK21_RS28305 PF12627 Probable RNA and SrmB- binding site of polymerase A RK21_RS28305 PF12626 Polymerase A arginine-rich C-terminus RK21_RS28310 PF00072 Response regulator receiver domain RK21_RS28310 PF02954 Bacterial regulatory protein, Fis family RK21_RS28310 PF00158 Sigma-54 interaction domain RK21_RS28315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS28315 PF08447 PAS fold RK21_RS28315 PF00989 PAS fold RK21_RS28315 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS28325 PF00749 tRNA synthetases class I (E and Q), catalytic domain RK21_RS28330 PF01258 Prokaryotic dksA/traR C4-type zinc finger RK21_RS28335 PF00155 Aminotransferase class I and II RK21_RS28340 PF17746 SfsA N-terminal OB domain RK21_RS28340 PF03749 Sugar fermentation stimulation protein RE domain RK21_RS28350 PF01497 Periplasmic binding protein RK21_RS28355 PF01032 FecCD transport family RK21_RS28360 PF00005 ABC transporter RK21_RS28380 PF00912 Transglycosylase RK21_RS28380 PF00905 Penicillin binding protein transpeptidase domain RK21_RS28380 PF14814 Bifunctional transglycosylase second domain RK21_RS28390 PF04287 tRNA pseudouridine synthase C RK21_RS28395 PF00205 Thiamine pyrophosphate enzyme, central domain RK21_RS28395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RK21_RS28395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RK21_RS28400 PF10369 Small subunit of acetolactate synthase RK21_RS28405 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RK21_RS28405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RK21_RS28410 PF01066 CDP-alcohol phosphatidyltransferase RK21_RS28415 PF00174 Oxidoreductase molybdopterin binding domain RK21_RS28420 PF01794 Ferric reductase like transmembrane component RK21_RS28455 PF00672 HAMP domain RK21_RS28455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RK21_RS28455 PF18698 Histidine kinase sensor domain RK21_RS28455 PF00989 PAS fold RK21_RS28455 PF00512 His Kinase A (phospho-acceptor) domain RK21_RS28460 PF02515 CoA-transferase family III RK21_RS28495 PF00440 Bacterial regulatory proteins, tetR family RK21_RS28530 PF02599 Global regulator protein family