locus-tag class description PP4_RS00005 PF00308 Bacterial dnaA protein PP4_RS00005 PF11638 DnaA N-terminal domain PP4_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PP4_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PP4_RS00010 PF02767 DNA polymerase III beta subunit, central domain PP4_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PP4_RS00015 PF02463 RecF/RecN/SMC N terminal domain PP4_RS00020 PF01751 Toprim domain PP4_RS00020 PF18053 DNA gyrase B subunit insert domain PP4_RS00020 PF00204 DNA gyrase B PP4_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus PP4_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS00030 PF09299 Mu transposase, C-terminal PP4_RS00030 PF00665 Integrase core domain PP4_RS00080 PF08019 Phosphoethanolamine transferase EptA/EptB PP4_RS00080 PF00884 Sulfatase PP4_RS00090 PF01545 Cation efflux family PP4_RS00105 PF00486 Transcriptional regulatory protein, C terminal PP4_RS00105 PF00072 Response regulator receiver domain PP4_RS00110 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS00110 PF00672 HAMP domain PP4_RS00130 PF00535 Glycosyl transferase family 2 PP4_RS00140 PF07396 Phosphate-selective porin O and P PP4_RS00155 PF00403 Heavy-metal-associated domain PP4_RS00165 PF00873 AcrB/AcrD/AcrF family PP4_RS00170 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS00170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS00175 PF02321 Outer membrane efflux protein PP4_RS00180 PF03573 outer membrane porin, OprD family PP4_RS00185 PF00072 Response regulator receiver domain PP4_RS00185 PF00486 Transcriptional regulatory protein, C terminal PP4_RS00210 PF00158 Sigma-54 interaction domain PP4_RS00210 PF00072 Response regulator receiver domain PP4_RS00210 PF02954 Bacterial regulatory protein, Fis family PP4_RS00215 PF00753 Metallo-beta-lactamase superfamily PP4_RS00225 PF01925 Sulfite exporter TauE/SafE PP4_RS00235 PF05199 GMC oxidoreductase PP4_RS00235 PF00732 GMC oxidoreductase PP4_RS00240 PF08946 Osmosensory transporter coiled coil PP4_RS00240 PF00083 Sugar (and other) transporter PP4_RS00255 PF02092 Glycyl-tRNA synthetase beta subunit PP4_RS00255 PF05746 DALR anticodon binding domain PP4_RS00260 PF02091 Glycyl-tRNA synthetase alpha subunit PP4_RS00265 PF03352 Methyladenine glycosylase PP4_RS00280 PF02254 TrkA-N domain PP4_RS00280 PF02080 TrkA-C domain PP4_RS00285 PF01029 NusB family PP4_RS00285 PF01189 16S rRNA methyltransferase RsmB/F PP4_RS00290 PF02911 Formyl transferase, C-terminal domain PP4_RS00290 PF00551 Formyl transferase PP4_RS00295 PF01327 Polypeptide deformylase PP4_RS00300 PF17782 DprA winged helix domain PP4_RS00300 PF02481 DNA recombination-mediator protein A PP4_RS00305 PF01300 Telomere recombination PP4_RS00315 PF00107 Zinc-binding dehydrogenase PP4_RS00315 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS00325 PF01218 Coproporphyrinogen III oxidase PP4_RS00330 PF01488 Shikimate / quinate 5-dehydrogenase PP4_RS00330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PP4_RS00330 PF08501 Shikimate dehydrogenase substrate binding domain PP4_RS00335 PF01740 STAS domain PP4_RS00335 PF00916 Sulfate permease family PP4_RS00340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS00345 PF00884 Sulfatase PP4_RS00345 PF12411 Choline sulfatase enzyme C terminal PP4_RS00350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS00350 PF03466 LysR substrate binding domain PP4_RS00365 PF00290 Tryptophan synthase alpha chain PP4_RS00370 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS00375 PF03466 LysR substrate binding domain PP4_RS00385 PF07311 Dodecin PP4_RS00395 PF00296 Luciferase-like monooxygenase PP4_RS00400 PF02566 OsmC-like protein PP4_RS00425 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS00430 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS00435 PF01432 Peptidase family M3 PP4_RS00440 PF09526 Probable metal-binding protein (DUF2387) PP4_RS00445 PF04055 Radical SAM superfamily PP4_RS00450 PF00484 Carbonic anhydrase PP4_RS00455 PF01740 STAS domain PP4_RS00455 PF00916 Sulfate permease family PP4_RS00465 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PP4_RS00465 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PP4_RS00470 PF00115 Cytochrome C and Quinol oxidase polypeptide I PP4_RS00475 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PP4_RS00480 PF00510 Cytochrome c oxidase subunit III PP4_RS00500 PF02628 Cytochrome oxidase assembly protein PP4_RS00505 PF01040 UbiA prenyltransferase family PP4_RS00510 PF02630 SCO1/SenC PP4_RS00515 PF03180 NLPA lipoprotein PP4_RS00520 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS00525 PF00005 ABC transporter PP4_RS00525 PF09383 NIL domain PP4_RS00530 PF18011 C-terminal domain found in long catalases PP4_RS00530 PF06628 Catalase-related immune-responsive PP4_RS00530 PF00199 Catalase PP4_RS00540 PF00950 ABC 3 transport family PP4_RS00545 PF00005 ABC transporter PP4_RS00550 PF01475 Ferric uptake regulator family PP4_RS00555 PF01297 Zinc-uptake complex component A periplasmic PP4_RS00560 PF01636 Phosphotransferase enzyme family PP4_RS00570 PF01612 3'-5' exonuclease PP4_RS00570 PF01367 5'-3' exonuclease, C-terminal SAM fold PP4_RS00570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PP4_RS00570 PF00476 DNA polymerase family A PP4_RS00575 PF01926 50S ribosome-binding GTPase PP4_RS00580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS00585 PF00034 Cytochrome c PP4_RS00590 PF01323 DSBA-like thioredoxin domain PP4_RS00600 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS00605 PF01510 N-acetylmuramoyl-L-alanine amidase PP4_RS00610 PF12792 CSS motif domain associated with EAL PP4_RS00610 PF00563 EAL domain PP4_RS00615 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS00615 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB PP4_RS00615 PF00672 HAMP domain PP4_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS00615 PF08448 PAS fold PP4_RS00620 PF02954 Bacterial regulatory protein, Fis family PP4_RS00620 PF00072 Response regulator receiver domain PP4_RS00620 PF00158 Sigma-54 interaction domain PP4_RS00645 PF00375 Sodium:dicarboxylate symporter family PP4_RS00650 PF07670 Nucleoside recognition PP4_RS00665 PF00005 ABC transporter PP4_RS00670 PF02405 Permease MlaE PP4_RS00685 PF02690 Na+/Pi-cotransporter PP4_RS00690 PF03741 Integral membrane protein TerC family PP4_RS00695 PF03600 Citrate transporter PP4_RS00730 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PP4_RS00730 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PP4_RS00735 PF02233 NAD(P) transhydrogenase beta subunit PP4_RS00740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PP4_RS00745 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PP4_RS00745 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PP4_RS00750 PF03466 LysR substrate binding domain PP4_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS00755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS00755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS00755 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS00760 PF02515 CoA-transferase family III PP4_RS00810 PF00593 TonB dependent receptor PP4_RS00810 PF07715 TonB-dependent Receptor Plug Domain PP4_RS00815 PF04773 FecR protein PP4_RS00815 PF16220 Domain of unknown function (DUF4880) PP4_RS00825 PF00392 Bacterial regulatory proteins, gntR family PP4_RS00825 PF07729 FCD domain PP4_RS00835 PF13188 PAS domain PP4_RS00835 PF03707 Bacterial signalling protein N terminal repeat PP4_RS00835 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS00835 PF00563 EAL domain PP4_RS00840 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS00840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS00845 PF03412 Peptidase C39 family PP4_RS00845 PF00664 ABC transporter transmembrane region PP4_RS00845 PF00005 ABC transporter PP4_RS00860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PP4_RS00870 PF00005 ABC transporter PP4_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS00895 PF04632 Fusaric acid resistance protein family PP4_RS00905 PF13533 Biotin-lipoyl like PP4_RS00910 PF02321 Outer membrane efflux protein PP4_RS00920 PF03239 Iron permease FTR1 family PP4_RS00935 PF13417 Glutathione S-transferase, N-terminal domain PP4_RS00935 PF14497 Glutathione S-transferase, C-terminal domain PP4_RS00940 PF14698 Argininosuccinate lyase C-terminal PP4_RS00940 PF00206 Lyase PP4_RS00945 PF04397 LytTr DNA-binding domain PP4_RS00945 PF00072 Response regulator receiver domain PP4_RS00950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PP4_RS00950 PF03900 Porphobilinogen deaminase, C-terminal domain PP4_RS00955 PF02602 Uroporphyrinogen-III synthase HemD PP4_RS00970 PF02600 Disulfide bond formation protein DsbB PP4_RS00975 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PP4_RS00980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PP4_RS00980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS00995 PF12848 ABC transporter PP4_RS00995 PF00005 ABC transporter PP4_RS01005 PF01810 LysE type translocator PP4_RS01010 PF01145 SPFH domain / Band 7 family PP4_RS01035 PF00478 IMP dehydrogenase / GMP reductase domain PP4_RS01035 PF00571 CBS domain PP4_RS01060 PF03781 Sulfatase-modifying factor enzyme 1 PP4_RS01070 PF00005 ABC transporter PP4_RS01110 PF00392 Bacterial regulatory proteins, gntR family PP4_RS01110 PF07702 UTRA domain PP4_RS01115 PF00890 FAD binding domain PP4_RS01115 PF02910 Fumarate reductase flavoprotein C-term PP4_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01135 PF00005 ABC transporter PP4_RS01150 PF00005 ABC transporter PP4_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01160 PF09084 NMT1/THI5 like PP4_RS01165 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PP4_RS01170 PF03466 LysR substrate binding domain PP4_RS01170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS01175 PF07715 TonB-dependent Receptor Plug Domain PP4_RS01175 PF00593 TonB dependent receptor PP4_RS01180 PF17425 Arylsulfotransferase Ig-like domain PP4_RS01180 PF05935 Arylsulfotransferase (ASST) PP4_RS01185 PF00171 Aldehyde dehydrogenase family PP4_RS01190 PF00202 Aminotransferase class-III PP4_RS01195 PF00486 Transcriptional regulatory protein, C terminal PP4_RS01195 PF00072 Response regulator receiver domain PP4_RS01200 PF08448 PAS fold PP4_RS01200 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS01215 PF03707 Bacterial signalling protein N terminal repeat PP4_RS01215 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS01215 PF00563 EAL domain PP4_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01225 PF00005 ABC transporter PP4_RS01225 PF09383 NIL domain PP4_RS01230 PF03180 NLPA lipoprotein PP4_RS01235 PF00296 Luciferase-like monooxygenase PP4_RS01240 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS01240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS01240 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS01245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS01245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS01250 PF00005 ABC transporter PP4_RS01255 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01260 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS01265 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS01270 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS01275 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PP4_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01285 PF00005 ABC transporter PP4_RS01290 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS01295 PF03573 outer membrane porin, OprD family PP4_RS01300 PF00578 AhpC/TSA family PP4_RS01300 PF10417 C-terminal domain of 1-Cys peroxiredoxin PP4_RS01305 PF03358 NADPH-dependent FMN reductase PP4_RS01310 PF09084 NMT1/THI5 like PP4_RS01315 PF00296 Luciferase-like monooxygenase PP4_RS01320 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01325 PF00005 ABC transporter PP4_RS01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS01330 PF03459 TOBE domain PP4_RS01340 PF04262 Glutamate-cysteine ligase PP4_RS01350 PF16921 Tex protein YqgF-like domain PP4_RS01350 PF09371 Tex-like protein N-terminal domain PP4_RS01350 PF00575 S1 RNA binding domain PP4_RS01350 PF17674 HHH domain PP4_RS01355 PF00072 Response regulator receiver domain PP4_RS01355 PF00486 Transcriptional regulatory protein, C terminal PP4_RS01360 PF00672 HAMP domain PP4_RS01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS01360 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS01365 PF08443 RimK-like ATP-grasp domain PP4_RS01365 PF18030 RimK PreATP-grasp domain PP4_RS01370 PF18030 RimK PreATP-grasp domain PP4_RS01370 PF08443 RimK-like ATP-grasp domain PP4_RS01375 PF01479 S4 domain PP4_RS01385 PF01430 Hsp33 protein PP4_RS01390 PF01293 Phosphoenolpyruvate carboxykinase PP4_RS01415 PF00384 Molybdopterin oxidoreductase PP4_RS01420 PF02634 FdhD/NarQ family PP4_RS01425 PF04972 BON domain PP4_RS01425 PF01476 LysM domain PP4_RS01430 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS01435 PF00293 NUDIX domain PP4_RS01440 PF00459 Inositol monophosphatase family PP4_RS01450 PF02954 Bacterial regulatory protein, Fis family PP4_RS01450 PF00072 Response regulator receiver domain PP4_RS01450 PF00158 Sigma-54 interaction domain PP4_RS01455 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS01455 PF02743 Cache domain PP4_RS01455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS01460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PP4_RS01465 PF04371 Porphyromonas-type peptidyl-arginine deiminase PP4_RS01475 PF00593 TonB dependent receptor PP4_RS01475 PF07715 TonB-dependent Receptor Plug Domain PP4_RS01480 PF03573 outer membrane porin, OprD family PP4_RS01485 PF01645 Conserved region in glutamate synthase PP4_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS01490 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS01490 PF00672 HAMP domain PP4_RS01495 PF00486 Transcriptional regulatory protein, C terminal PP4_RS01495 PF00072 Response regulator receiver domain PP4_RS01500 PF07715 TonB-dependent Receptor Plug Domain PP4_RS01500 PF07660 Secretin and TonB N terminus short domain PP4_RS01500 PF00593 TonB dependent receptor PP4_RS01525 PF00589 Phage integrase family PP4_RS01525 PF13356 Arm DNA-binding domain PP4_RS01550 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01560 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS01565 PF00005 ABC transporter PP4_RS01570 PF00324 Amino acid permease PP4_RS01580 PF03976 Polyphosphate kinase 2 (PPK2) PP4_RS01590 PF04362 Bacterial Fe(2+) trafficking PP4_RS01595 PF14815 NUDIX domain PP4_RS01595 PF00730 HhH-GPD superfamily base excision DNA repair protein PP4_RS01595 PF00633 Helix-hairpin-helix motif PP4_RS01595 PF10576 Iron-sulfur binding domain of endonuclease III PP4_RS01605 PF07690 Major Facilitator Superfamily PP4_RS01610 PF00475 Imidazoleglycerol-phosphate dehydratase PP4_RS01615 PF00117 Glutamine amidotransferase class-I PP4_RS01625 PF00977 Histidine biosynthesis protein PP4_RS01630 PF00977 Histidine biosynthesis protein PP4_RS01635 PF00571 CBS domain PP4_RS01635 PF00005 ABC transporter PP4_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS01645 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS01650 PF03315 Serine dehydratase beta chain PP4_RS01650 PF03313 Serine dehydratase alpha chain PP4_RS01655 PF12833 Helix-turn-helix domain PP4_RS01655 PF01965 DJ-1/PfpI family PP4_RS01680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PP4_RS01680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP4_RS01685 PF05853 beta-keto acid cleavage enzyme PP4_RS01695 PF12833 Helix-turn-helix domain PP4_RS01695 PF01965 DJ-1/PfpI family PP4_RS01715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS01720 PF13183 4Fe-4S dicluster domain PP4_RS01720 PF02754 Cysteine-rich domain PP4_RS01725 PF01012 Electron transfer flavoprotein domain PP4_RS01725 PF00766 Electron transfer flavoprotein FAD-binding domain PP4_RS01740 PF00355 Rieske [2Fe-2S] domain PP4_RS01740 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PP4_RS01745 PF00042 Globin PP4_RS01745 PF00970 Oxidoreductase FAD-binding domain PP4_RS01745 PF00175 Oxidoreductase NAD-binding domain PP4_RS01750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS01750 PF12729 Four helix bundle sensory module for signal transduction PP4_RS01750 PF00672 HAMP domain PP4_RS01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS01765 PF00672 HAMP domain PP4_RS01765 PF02743 Cache domain PP4_RS01770 PF01212 Beta-eliminating lyase PP4_RS01775 PF00464 Serine hydroxymethyltransferase PP4_RS01780 PF01266 FAD dependent oxidoreductase PP4_RS01790 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS01790 PF01571 Aminomethyltransferase folate-binding domain PP4_RS01790 PF17806 Sarcosine oxidase A3 domain PP4_RS01790 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS01800 PF00551 Formyl transferase PP4_RS01805 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS01805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PP4_RS01820 PF00324 Amino acid permease PP4_RS01825 PF01553 Acyltransferase PP4_RS01840 PF00072 Response regulator receiver domain PP4_RS01840 PF00486 Transcriptional regulatory protein, C terminal PP4_RS01845 PF00672 HAMP domain PP4_RS01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS01845 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS01850 PF06123 Inner membrane protein CreD PP4_RS01860 PF01625 Peptide methionine sulfoxide reductase PP4_RS01865 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS01865 PF00563 EAL domain PP4_RS01865 PF03707 Bacterial signalling protein N terminal repeat PP4_RS01870 PF02817 e3 binding domain PP4_RS01870 PF00364 Biotin-requiring enzyme PP4_RS01870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PP4_RS01875 PF17831 Pyruvate dehydrogenase E1 component middle domain PP4_RS01875 PF00456 Transketolase, thiamine diphosphate binding domain PP4_RS01880 PF08335 GlnD PII-uridylyltransferase PP4_RS01880 PF03710 Glutamate-ammonia ligase adenylyltransferase PP4_RS01885 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PP4_RS01890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PP4_RS01895 PF00534 Glycosyl transferases group 1 PP4_RS01895 PF13439 Glycosyltransferase Family 4 PP4_RS01935 PF00593 TonB dependent receptor PP4_RS01935 PF07715 TonB-dependent Receptor Plug Domain PP4_RS01940 PF04773 FecR protein PP4_RS01940 PF16220 Domain of unknown function (DUF4880) PP4_RS01945 PF04542 Sigma-70 region 2 PP4_RS01945 PF08281 Sigma-70, region 4 PP4_RS01950 PF02811 PHP domain PP4_RS01950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PP4_RS01950 PF14579 Helix-hairpin-helix motif PP4_RS01950 PF00929 Exonuclease PP4_RS01950 PF07733 Bacterial DNA polymerase III alpha NTPase domain PP4_RS01960 PF00158 Sigma-54 interaction domain PP4_RS01960 PF00072 Response regulator receiver domain PP4_RS01960 PF02954 Bacterial regulatory protein, Fis family PP4_RS01965 PF01274 Malate synthase PP4_RS01975 PF00892 EamA-like transporter family PP4_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS01985 PF03459 TOBE domain PP4_RS01995 PF04055 Radical SAM superfamily PP4_RS01995 PF06968 Biotin and Thiamin Synthesis associated domain PP4_RS02000 PF00155 Aminotransferase class I and II PP4_RS02010 PF08241 Methyltransferase domain PP4_RS02025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS02025 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS02025 PF12806 Acetyl-CoA dehydrogenase C-terminal like PP4_RS02025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS02030 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS02035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS02035 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS02035 PF12806 Acetyl-CoA dehydrogenase C-terminal like PP4_RS02035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS02040 PF03466 LysR substrate binding domain PP4_RS02040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS02045 PF00202 Aminotransferase class-III PP4_RS02055 PF00326 Prolyl oligopeptidase family PP4_RS02060 PF04055 Radical SAM superfamily PP4_RS02060 PF13186 Iron-sulfur cluster-binding domain PP4_RS02065 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PP4_RS02070 PF03070 TENA/THI-4/PQQC family PP4_RS02075 PF12706 Beta-lactamase superfamily domain PP4_RS02080 PF00675 Insulinase (Peptidase family M16) PP4_RS02085 PF00795 Carbon-nitrogen hydrolase PP4_RS02090 PF01593 Flavin containing amine oxidoreductase PP4_RS02095 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA PP4_RS02125 PF03707 Bacterial signalling protein N terminal repeat PP4_RS02125 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS02125 PF00563 EAL domain PP4_RS02130 PF00140 Sigma-70 factor, region 1.2 PP4_RS02130 PF04545 Sigma-70, region 4 PP4_RS02130 PF04542 Sigma-70 region 2 PP4_RS02130 PF04546 Sigma-70, non-essential region PP4_RS02130 PF03979 Sigma-70 factor, region 1.1 PP4_RS02130 PF04539 Sigma-70 region 3 PP4_RS02135 PF13662 Toprim domain PP4_RS02135 PF10410 DnaB-helicase binding domain of primase PP4_RS02135 PF08275 DNA primase catalytic core, N-terminal domain PP4_RS02135 PF01807 CHC2 zinc finger PP4_RS02135 PF08278 DNA primase DnaG DnaB-binding PP4_RS02140 PF01165 Ribosomal protein S21 PP4_RS02145 PF00814 Glycoprotease family PP4_RS02150 PF02660 Glycerol-3-phosphate acyltransferase PP4_RS02155 PF02152 Dihydroneopterin aldolase PP4_RS02165 PF12627 Probable RNA and SrmB- binding site of polymerase A PP4_RS02165 PF01743 Poly A polymerase head domain PP4_RS02170 PF04293 SpoVR like protein PP4_RS02175 PF04285 Protein of unknown function (DUF444) PP4_RS02180 PF08298 PrkA AAA domain PP4_RS02180 PF06798 PrkA serine protein kinase C-terminal domain PP4_RS02185 PF00581 Rhodanese-like domain PP4_RS02190 PF00149 Calcineurin-like phosphoesterase PP4_RS02195 PF04379 ApaG domain PP4_RS02200 PF00398 Ribosomal RNA adenine dimethylase PP4_RS02205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PP4_RS02210 PF09312 SurA N-terminal domain PP4_RS02210 PF00639 PPIC-type PPIASE domain PP4_RS02215 PF04453 LPS transport system D PP4_RS02215 PF03968 OstA-like protein PP4_RS02220 PF01636 Phosphotransferase enzyme family PP4_RS02225 PF00483 Nucleotidyl transferase PP4_RS02230 PF05099 Tellurite resistance protein TerB PP4_RS02230 PF00226 DnaJ domain PP4_RS02240 PF00672 HAMP domain PP4_RS02240 PF07730 Histidine kinase PP4_RS02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS02245 PF00072 Response regulator receiver domain PP4_RS02245 PF00196 Bacterial regulatory proteins, luxR family PP4_RS02250 PF00005 ABC transporter PP4_RS02250 PF08402 TOBE domain PP4_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS02270 PF00834 Ribulose-phosphate 3 epimerase family PP4_RS02275 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS02280 PF00425 chorismate binding enzyme PP4_RS02280 PF04715 Anthranilate synthase component I, N terminal region PP4_RS02285 PF00657 GDSL-like Lipase/Acylhydrolase PP4_RS02285 PF03797 Autotransporter beta-domain PP4_RS02290 PF00117 Glutamine amidotransferase class-I PP4_RS02295 PF02885 Glycosyl transferase family, helical bundle domain PP4_RS02295 PF00591 Glycosyl transferase family, a/b domain PP4_RS02300 PF00218 Indole-3-glycerol phosphate synthase PP4_RS02310 PF00027 Cyclic nucleotide-binding domain PP4_RS02310 PF13545 Crp-like helix-turn-helix domain PP4_RS02315 PF02566 OsmC-like protein PP4_RS02325 PF03232 Ubiquinone biosynthesis protein COQ7 PP4_RS02330 PF01230 HIT domain PP4_RS02335 PF00106 short chain dehydrogenase PP4_RS02340 PF03060 Nitronate monooxygenase PP4_RS02345 PF03653 Uncharacterised protein family (UPF0093) PP4_RS02350 PF01118 Semialdehyde dehydrogenase, NAD binding domain PP4_RS02350 PF02774 Semialdehyde dehydrogenase, dimerisation domain PP4_RS02355 PF01521 Iron-sulphur cluster biosynthesis PP4_RS02360 PF03702 Anhydro-N-acetylmuramic acid kinase PP4_RS02365 PF01551 Peptidase family M23 PP4_RS02365 PF04225 Opacity-associated protein A LysM-like domain PP4_RS02370 PF00579 tRNA synthetases class I (W and Y) PP4_RS02370 PF01479 S4 domain PP4_RS02400 PF08279 HTH domain PP4_RS02400 PF02237 Biotin protein ligase C terminal domain PP4_RS02400 PF03099 Biotin/lipoate A/B protein ligase family PP4_RS02405 PF03309 Type III pantothenate kinase PP4_RS02430 PF00009 Elongation factor Tu GTP binding domain PP4_RS02430 PF03143 Elongation factor Tu C-terminal domain PP4_RS02430 PF03144 Elongation factor Tu domain 2 PP4_RS02440 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PP4_RS02445 PF00467 KOW motif PP4_RS02445 PF02357 Transcription termination factor nusG PP4_RS02450 PF00298 Ribosomal protein L11, RNA binding domain PP4_RS02450 PF03946 Ribosomal protein L11, N-terminal domain PP4_RS02455 PF00687 Ribosomal protein L1p/L10e family PP4_RS02460 PF00466 Ribosomal protein L10 PP4_RS02465 PF00542 Ribosomal protein L7/L12 C-terminal domain PP4_RS02465 PF16320 Ribosomal protein L7/L12 dimerisation domain PP4_RS02470 PF04560 RNA polymerase Rpb2, domain 7 PP4_RS02470 PF00562 RNA polymerase Rpb2, domain 6 PP4_RS02470 PF04563 RNA polymerase beta subunit PP4_RS02470 PF04561 RNA polymerase Rpb2, domain 2 PP4_RS02470 PF10385 RNA polymerase beta subunit external 1 domain PP4_RS02470 PF04565 RNA polymerase Rpb2, domain 3 PP4_RS02475 PF04997 RNA polymerase Rpb1, domain 1 PP4_RS02475 PF04998 RNA polymerase Rpb1, domain 5 PP4_RS02475 PF05000 RNA polymerase Rpb1, domain 4 PP4_RS02475 PF04983 RNA polymerase Rpb1, domain 3 PP4_RS02475 PF00623 RNA polymerase Rpb1, domain 2 PP4_RS02480 PF00164 Ribosomal protein S12/S23 PP4_RS02485 PF00177 Ribosomal protein S7p/S5e PP4_RS02490 PF14492 Elongation Factor G, domain II PP4_RS02490 PF00009 Elongation factor Tu GTP binding domain PP4_RS02490 PF00679 Elongation factor G C-terminus PP4_RS02490 PF03144 Elongation factor Tu domain 2 PP4_RS02490 PF03764 Elongation factor G, domain IV PP4_RS02495 PF03143 Elongation factor Tu C-terminal domain PP4_RS02495 PF03144 Elongation factor Tu domain 2 PP4_RS02495 PF00009 Elongation factor Tu GTP binding domain PP4_RS02500 PF00338 Ribosomal protein S10p/S20e PP4_RS02505 PF00297 Ribosomal protein L3 PP4_RS02510 PF00573 Ribosomal protein L4/L1 family PP4_RS02515 PF00276 Ribosomal protein L23 PP4_RS02520 PF00181 Ribosomal Proteins L2, RNA binding domain PP4_RS02520 PF03947 Ribosomal Proteins L2, C-terminal domain PP4_RS02525 PF00203 Ribosomal protein S19 PP4_RS02530 PF00237 Ribosomal protein L22p/L17e PP4_RS02535 PF00189 Ribosomal protein S3, C-terminal domain PP4_RS02535 PF07650 KH domain PP4_RS02540 PF00252 Ribosomal protein L16p/L10e PP4_RS02545 PF00831 Ribosomal L29 protein PP4_RS02550 PF00366 Ribosomal protein S17 PP4_RS02555 PF00238 Ribosomal protein L14p/L23e PP4_RS02560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PP4_RS02560 PF00467 KOW motif PP4_RS02565 PF00673 ribosomal L5P family C-terminus PP4_RS02565 PF00281 Ribosomal protein L5 PP4_RS02570 PF00253 Ribosomal protein S14p/S29e PP4_RS02575 PF00410 Ribosomal protein S8 PP4_RS02580 PF00347 Ribosomal protein L6 PP4_RS02585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PP4_RS02590 PF03719 Ribosomal protein S5, C-terminal domain PP4_RS02590 PF00333 Ribosomal protein S5, N-terminal domain PP4_RS02595 PF00327 Ribosomal protein L30p/L7e PP4_RS02600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PP4_RS02605 PF00344 SecY translocase PP4_RS02610 PF00444 Ribosomal protein L36 PP4_RS02615 PF00416 Ribosomal protein S13/S18 PP4_RS02620 PF00411 Ribosomal protein S11 PP4_RS02625 PF01479 S4 domain PP4_RS02625 PF00163 Ribosomal protein S4/S9 N-terminal domain PP4_RS02630 PF01000 RNA polymerase Rpb3/RpoA insert domain PP4_RS02630 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PP4_RS02630 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PP4_RS02635 PF01196 Ribosomal protein L17 PP4_RS02640 PF06628 Catalase-related immune-responsive PP4_RS02640 PF00199 Catalase PP4_RS02645 PF00210 Ferritin-like domain PP4_RS02650 PF17755 UvrA DNA-binding domain PP4_RS02650 PF17760 UvrA interaction domain PP4_RS02655 PF07690 Major Facilitator Superfamily PP4_RS02660 PF00436 Single-strand binding protein family PP4_RS02665 PF00155 Aminotransferase class I and II PP4_RS02665 PF00392 Bacterial regulatory proteins, gntR family PP4_RS02675 PF01925 Sulfite exporter TauE/SafE PP4_RS02680 PF00106 short chain dehydrogenase PP4_RS02685 PF00384 Molybdopterin oxidoreductase PP4_RS02685 PF01568 Molydopterin dinucleotide binding domain PP4_RS02685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS02690 PF00384 Molybdopterin oxidoreductase PP4_RS02690 PF01568 Molydopterin dinucleotide binding domain PP4_RS02690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS02695 PF09163 Formate dehydrogenase N, transmembrane PP4_RS02695 PF13247 4Fe-4S dicluster domain PP4_RS02700 PF01292 Prokaryotic cytochrome b561 PP4_RS02705 PF04216 Protein involved in formate dehydrogenase formation PP4_RS02710 PF12390 Selenocysteine synthase N terminal PP4_RS02710 PF03841 L-seryl-tRNA selenium transferase PP4_RS02715 PF09107 Elongation factor SelB, winged helix PP4_RS02715 PF00009 Elongation factor Tu GTP binding domain PP4_RS02715 PF03144 Elongation factor Tu domain 2 PP4_RS02715 PF09106 Elongation factor SelB, winged helix PP4_RS02725 PF00710 Asparaginase, N-terminal PP4_RS02725 PF17763 Glutaminase/Asparaginase C-terminal domain PP4_RS02730 PF01235 Sodium:alanine symporter family PP4_RS02745 PF01925 Sulfite exporter TauE/SafE PP4_RS02760 PF01370 NAD dependent epimerase/dehydratase family PP4_RS02765 PF01638 HxlR-like helix-turn-helix PP4_RS02770 PF07690 Major Facilitator Superfamily PP4_RS02775 PF03922 OmpW family PP4_RS02790 PF12704 MacB-like periplasmic core domain PP4_RS02790 PF02687 FtsX-like permease family PP4_RS02790 PF00005 ABC transporter PP4_RS02810 PF00085 Thioredoxin PP4_RS02825 PF03477 ATP cone domain PP4_RS02830 PF01872 RibD C-terminal domain PP4_RS02830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PP4_RS02835 PF00677 Lumazine binding domain PP4_RS02840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PP4_RS02840 PF00925 GTP cyclohydrolase II PP4_RS02845 PF00885 6,7-dimethyl-8-ribityllumazine synthase PP4_RS02850 PF01029 NusB family PP4_RS02855 PF00586 AIR synthase related protein, N-terminal domain PP4_RS02855 PF02769 AIR synthase related protein, C-terminal domain PP4_RS02860 PF04608 Phosphatidylglycerophosphatase A PP4_RS02870 PF00925 GTP cyclohydrolase II PP4_RS02880 PF01497 Periplasmic binding protein PP4_RS02885 PF07715 TonB-dependent Receptor Plug Domain PP4_RS02885 PF00593 TonB dependent receptor PP4_RS02890 PF02779 Transketolase, pyrimidine binding domain PP4_RS02890 PF02780 Transketolase, C-terminal domain PP4_RS02890 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PP4_RS02895 PF00348 Polyprenyl synthetase PP4_RS02900 PF02609 Exonuclease VII small subunit PP4_RS02905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PP4_RS02910 PF01139 tRNA-splicing ligase RtcB PP4_RS02920 PF00756 Putative esterase PP4_RS02925 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS02925 PF00672 HAMP domain PP4_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS02925 PF16750 Sensor domain of 2-component histidine kinase PP4_RS02930 PF00486 Transcriptional regulatory protein, C terminal PP4_RS02930 PF00072 Response regulator receiver domain PP4_RS02935 PF07715 TonB-dependent Receptor Plug Domain PP4_RS02935 PF07660 Secretin and TonB N terminus short domain PP4_RS02935 PF00593 TonB dependent receptor PP4_RS02940 PF00589 Phage integrase family PP4_RS02940 PF02899 Phage integrase, N-terminal SAM-like domain PP4_RS02965 PF01381 Helix-turn-helix PP4_RS02975 PF04851 Type III restriction enzyme, res subunit PP4_RS02985 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PP4_RS02990 PF11769 Protein of unknown function (DUF3313) PP4_RS03010 PF17863 AAA lid domain PP4_RS03010 PF07726 ATPase family associated with various cellular activities (AAA) PP4_RS03030 PF07584 Aerotolerance regulator N-terminal PP4_RS03030 PF13519 von Willebrand factor type A domain PP4_RS03045 PF00884 Sulfatase PP4_RS03055 PF06826 Predicted Permease Membrane Region PP4_RS03060 PF00924 Mechanosensitive ion channel PP4_RS03095 PF13426 PAS domain PP4_RS03095 PF00563 EAL domain PP4_RS03095 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS03110 PF08281 Sigma-70, region 4 PP4_RS03110 PF04542 Sigma-70 region 2 PP4_RS03115 PF00593 TonB dependent receptor PP4_RS03115 PF07715 TonB-dependent Receptor Plug Domain PP4_RS03125 PF00719 Inorganic pyrophosphatase PP4_RS03130 PF06167 Glucose-regulated metallo-peptidase M90 PP4_RS03135 PF09335 SNARE associated Golgi protein PP4_RS03140 PF00583 Acetyltransferase (GNAT) family PP4_RS03145 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PP4_RS03150 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PP4_RS03155 PF13520 Amino acid permease PP4_RS03160 PF00171 Aldehyde dehydrogenase family PP4_RS03165 PF02954 Bacterial regulatory protein, Fis family PP4_RS03165 PF01590 GAF domain PP4_RS03165 PF00158 Sigma-54 interaction domain PP4_RS03170 PF08245 Mur ligase middle domain PP4_RS03170 PF01225 Mur ligase family, catalytic domain PP4_RS03170 PF02875 Mur ligase family, glutamate ligase domain PP4_RS03175 PF02441 Flavoprotein PP4_RS03185 PF13460 NAD(P)H-binding PP4_RS03195 PF00107 Zinc-binding dehydrogenase PP4_RS03195 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS03200 PF00364 Biotin-requiring enzyme PP4_RS03200 PF00561 alpha/beta hydrolase fold PP4_RS03205 PF02780 Transketolase, C-terminal domain PP4_RS03205 PF02779 Transketolase, pyrimidine binding domain PP4_RS03210 PF00676 Dehydrogenase E1 component PP4_RS03215 PF01513 ATP-NAD kinase PP4_RS03220 PF01590 GAF domain PP4_RS03220 PF00158 Sigma-54 interaction domain PP4_RS03220 PF02954 Bacterial regulatory protein, Fis family PP4_RS03225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PP4_RS03225 PF02785 Biotin carboxylase C-terminal domain PP4_RS03225 PF00289 Biotin carboxylase, N-terminal domain PP4_RS03230 PF00364 Biotin-requiring enzyme PP4_RS03235 PF01220 Dehydroquinase class II PP4_RS03240 PF11412 Disulphide bond corrector protein DsbC PP4_RS03240 PF02683 Cytochrome C biogenesis protein transmembrane region PP4_RS03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS03250 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS03250 PF00072 Response regulator receiver domain PP4_RS03260 PF00293 NUDIX domain PP4_RS03265 PF01253 Translation initiation factor SUI1 PP4_RS03270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PP4_RS03270 PF17810 Arginine decarboxylase helical bundle domain PP4_RS03270 PF17944 Arginine decarboxylase C-terminal helical extension PP4_RS03280 PF01554 MatE PP4_RS03285 PF07678 A-macroglobulin TED domain PP4_RS03285 PF07703 Alpha-2-macroglobulin bait region domain PP4_RS03285 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PP4_RS03285 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PP4_RS03285 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PP4_RS03285 PF01835 MG2 domain PP4_RS03285 PF17962 Bacterial macroglobulin domain 6 PP4_RS03285 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PP4_RS03285 PF00207 Alpha-2-macroglobulin family PP4_RS03295 PF00905 Penicillin binding protein transpeptidase domain PP4_RS03295 PF06832 Penicillin-Binding Protein C-terminus Family PP4_RS03295 PF00912 Transglycosylase PP4_RS03300 PF08479 POTRA domain, ShlB-type PP4_RS03300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PP4_RS03305 PF00196 Bacterial regulatory proteins, luxR family PP4_RS03305 PF00072 Response regulator receiver domain PP4_RS03325 PF13847 Methyltransferase domain PP4_RS03335 PF01575 MaoC like domain PP4_RS03345 PF00108 Thiolase, N-terminal domain PP4_RS03345 PF02803 Thiolase, C-terminal domain PP4_RS03350 PF02311 AraC-like ligand binding domain PP4_RS03350 PF12833 Helix-turn-helix domain PP4_RS03355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS03355 PF00672 HAMP domain PP4_RS03360 PF09278 MerR, DNA binding PP4_RS03360 PF00376 MerR family regulatory protein PP4_RS03365 PF00403 Heavy-metal-associated domain PP4_RS03380 PF07690 Major Facilitator Superfamily PP4_RS03390 PF00962 Adenosine/AMP deaminase PP4_RS03400 PF01205 Uncharacterized protein family UPF0029 PP4_RS03405 PF00440 Bacterial regulatory proteins, tetR family PP4_RS03405 PF08362 YcdC-like protein, C-terminal region PP4_RS03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03410 PF03466 LysR substrate binding domain PP4_RS03415 PF00202 Aminotransferase class-III PP4_RS03420 PF00171 Aldehyde dehydrogenase family PP4_RS03440 PF17946 RecC C-terminal domain PP4_RS03445 PF12705 PD-(D/E)XK nuclease superfamily PP4_RS03445 PF13361 UvrD-like helicase C-terminal domain PP4_RS03445 PF00580 UvrD/REP helicase N-terminal domain PP4_RS03450 PF13538 UvrD-like helicase C-terminal domain PP4_RS03460 PF17152 Periplasmic sensor domain PP4_RS03460 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS03465 PF05736 OprF membrane domain PP4_RS03465 PF00691 OmpA family PP4_RS03475 PF03466 LysR substrate binding domain PP4_RS03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03480 PF00171 Aldehyde dehydrogenase family PP4_RS03485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PP4_RS03485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PP4_RS03520 PF00782 Dual specificity phosphatase, catalytic domain PP4_RS03525 PF12147 Putative methyltransferase PP4_RS03525 PF12146 Serine aminopeptidase, S33 PP4_RS03530 PF01066 CDP-alcohol phosphatidyltransferase PP4_RS03535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03535 PF03466 LysR substrate binding domain PP4_RS03550 PF02525 Flavodoxin-like fold PP4_RS03555 PF03466 LysR substrate binding domain PP4_RS03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03570 PF00672 HAMP domain PP4_RS03570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS03570 PF16591 Helical bimodular sensor domain PP4_RS03575 PF04228 Putative neutral zinc metallopeptidase PP4_RS03580 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PP4_RS03580 PF00775 Dioxygenase PP4_RS03585 PF00775 Dioxygenase PP4_RS03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03595 PF03466 LysR substrate binding domain PP4_RS03600 PF05958 tRNA (Uracil-5-)-methyltransferase PP4_RS03605 PF00860 Permease family PP4_RS03615 PF01654 Cytochrome bd terminal oxidase subunit I PP4_RS03620 PF02322 Cytochrome bd terminal oxidase subunit II PP4_RS03630 PF05175 Methyltransferase small domain PP4_RS03635 PF03472 Autoinducer binding domain PP4_RS03635 PF00196 Bacterial regulatory proteins, luxR family PP4_RS03640 PF00970 Oxidoreductase FAD-binding domain PP4_RS03640 PF00175 Oxidoreductase NAD-binding domain PP4_RS03645 PF01741 Large-conductance mechanosensitive channel, MscL PP4_RS03650 PF18073 Rubredoxin metal binding domain PP4_RS03655 PF00860 Permease family PP4_RS03660 PF07238 PilZ domain PP4_RS03665 PF13722 5TM C-terminal transporter carbon starvation CstA PP4_RS03665 PF02554 Carbon starvation protein CstA PP4_RS03670 PF04328 Selenoprotein, putative PP4_RS03675 PF02492 CobW/HypB/UreG, nucleotide-binding domain PP4_RS03675 PF07683 Cobalamin synthesis protein cobW C-terminal domain PP4_RS03685 PF08267 Cobalamin-independent synthase, N-terminal domain PP4_RS03685 PF01717 Cobalamin-independent synthase, Catalytic domain PP4_RS03690 PF00108 Thiolase, N-terminal domain PP4_RS03690 PF02803 Thiolase, C-terminal domain PP4_RS03705 PF12241 Trans-2-enoyl-CoA reductase catalytic region PP4_RS03705 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PP4_RS03705 PF07055 Enoyl reductase FAD binding domain PP4_RS03735 PF13411 MerR HTH family regulatory protein PP4_RS03745 PF01740 STAS domain PP4_RS03745 PF13426 PAS domain PP4_RS03750 PF00258 Flavodoxin PP4_RS03755 PF03466 LysR substrate binding domain PP4_RS03755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03760 PF03788 LrgA family PP4_RS03765 PF04172 LrgB-like family PP4_RS03770 PF00561 alpha/beta hydrolase fold PP4_RS03775 PF00106 short chain dehydrogenase PP4_RS03785 PF04209 homogentisate 1,2-dioxygenase PP4_RS03790 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS03795 PF13417 Glutathione S-transferase, N-terminal domain PP4_RS03800 PF13369 Transglutaminase-like superfamily PP4_RS03805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PP4_RS03805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PP4_RS03815 PF06146 Phosphate-starvation-inducible E PP4_RS03830 PF08448 PAS fold PP4_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS03830 PF08447 PAS fold PP4_RS03865 PF00437 Type II/IV secretion system protein PP4_RS03875 PF04972 BON domain PP4_RS03875 PF00263 Bacterial type II and III secretion system protein PP4_RS03875 PF13629 Pilus formation protein N terminal region PP4_RS03890 PF00196 Bacterial regulatory proteins, luxR family PP4_RS03890 PF00072 Response regulator receiver domain PP4_RS03900 PF00593 TonB dependent receptor PP4_RS03900 PF07660 Secretin and TonB N terminus short domain PP4_RS03900 PF07715 TonB-dependent Receptor Plug Domain PP4_RS03905 PF04773 FecR protein PP4_RS03905 PF16220 Domain of unknown function (DUF4880) PP4_RS03910 PF04542 Sigma-70 region 2 PP4_RS03910 PF08281 Sigma-70, region 4 PP4_RS03940 PF07715 TonB-dependent Receptor Plug Domain PP4_RS03940 PF00593 TonB dependent receptor PP4_RS03945 PF12833 Helix-turn-helix domain PP4_RS03945 PF06445 GyrI-like small molecule binding domain PP4_RS03950 PF00892 EamA-like transporter family PP4_RS03955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS03955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS03960 PF03466 LysR substrate binding domain PP4_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS03965 PF02321 Outer membrane efflux protein PP4_RS03970 PF04632 Fusaric acid resistance protein family PP4_RS03980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS03980 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS03985 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system PP4_RS04000 PF03466 LysR substrate binding domain PP4_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS04005 PF07690 Major Facilitator Superfamily PP4_RS04010 PF13533 Biotin-lipoyl like PP4_RS04015 PF02321 Outer membrane efflux protein PP4_RS04020 PF00106 short chain dehydrogenase PP4_RS04030 PF00483 Nucleotidyl transferase PP4_RS04030 PF01050 Mannose-6-phosphate isomerase PP4_RS04035 PF11182 Alginate O-acetyl transferase AlgF PP4_RS04040 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PP4_RS04045 PF03062 MBOAT, membrane-bound O-acyltransferase family PP4_RS04050 PF05426 Alginate lyase PP4_RS04055 PF16824 C-terminal carbohydrate-binding module PP4_RS04055 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PP4_RS04060 PF13229 Right handed beta helix region PP4_RS04065 PF13372 Alginate export PP4_RS04070 PF08238 Sel1 repeat PP4_RS04075 PF07238 PilZ domain PP4_RS04085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PP4_RS04085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PP4_RS04085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PP4_RS04090 PF03883 Peroxide stress protein YaaA PP4_RS04100 PF13638 PIN domain PP4_RS04100 PF02562 PhoH-like protein PP4_RS04105 PF01967 MoaC family PP4_RS04110 PF02597 ThiS family PP4_RS04115 PF02391 MoaE protein PP4_RS04120 PF00270 DEAD/DEAH box helicase PP4_RS04120 PF00271 Helicase conserved C-terminal domain PP4_RS04125 PF02230 Phospholipase/Carboxylesterase PP4_RS04130 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS04140 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS04145 PF00005 ABC transporter PP4_RS04150 PF13180 PDZ domain PP4_RS04155 PF01784 NIF3 (NGG1p interacting factor 3) PP4_RS04160 PF01507 Phosphoadenosine phosphosulfate reductase family PP4_RS04165 PF00009 Elongation factor Tu GTP binding domain PP4_RS04170 PF13404 AsnC-type helix-turn-helix domain PP4_RS04170 PF01037 Lrp/AsnC ligand binding domain PP4_RS04175 PF01053 Cys/Met metabolism PLP-dependent enzyme PP4_RS04190 PF00579 tRNA synthetases class I (W and Y) PP4_RS04195 PF03969 AFG1-like ATPase PP4_RS04205 PF00248 Aldo/keto reductase family PP4_RS04210 PF00572 Ribosomal protein L13 PP4_RS04215 PF00380 Ribosomal protein S9/S16 PP4_RS04220 PF00355 Rieske [2Fe-2S] domain PP4_RS04220 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PP4_RS04225 PF00033 Cytochrome b/b6/petB PP4_RS04225 PF00032 Cytochrome b(C-terminal)/b6/petD PP4_RS04230 PF02167 Cytochrome C1 family PP4_RS04235 PF00043 Glutathione S-transferase, C-terminal domain PP4_RS04235 PF02798 Glutathione S-transferase, N-terminal domain PP4_RS04240 PF04386 Stringent starvation protein B PP4_RS04250 PF04972 BON domain PP4_RS04255 PF13580 SIS domain PP4_RS04260 PF02021 Uncharacterised protein family UPF0102 PP4_RS04265 PF04348 LppC putative lipoprotein PP4_RS04270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS04275 PF02381 MraZ protein, putative antitoxin-like PP4_RS04280 PF01795 MraW methylase family PP4_RS04285 PF04999 Cell division protein FtsL PP4_RS04290 PF00905 Penicillin binding protein transpeptidase domain PP4_RS04290 PF03717 Penicillin-binding Protein dimerisation domain PP4_RS04295 PF08245 Mur ligase middle domain PP4_RS04295 PF01225 Mur ligase family, catalytic domain PP4_RS04295 PF02875 Mur ligase family, glutamate ligase domain PP4_RS04300 PF02875 Mur ligase family, glutamate ligase domain PP4_RS04300 PF01225 Mur ligase family, catalytic domain PP4_RS04300 PF08245 Mur ligase middle domain PP4_RS04305 PF00953 Glycosyl transferase family 4 PP4_RS04305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PP4_RS04310 PF02875 Mur ligase family, glutamate ligase domain PP4_RS04310 PF08245 Mur ligase middle domain PP4_RS04315 PF01098 Cell cycle protein PP4_RS04320 PF03033 Glycosyltransferase family 28 N-terminal domain PP4_RS04320 PF04101 Glycosyltransferase family 28 C-terminal domain PP4_RS04325 PF01225 Mur ligase family, catalytic domain PP4_RS04325 PF02875 Mur ligase family, glutamate ligase domain PP4_RS04325 PF08245 Mur ligase middle domain PP4_RS04330 PF07478 D-ala D-ala ligase C-terminus PP4_RS04330 PF01820 D-ala D-ala ligase N-terminus PP4_RS04335 PF08478 POTRA domain, FtsQ-type PP4_RS04335 PF03799 Cell division protein FtsQ PP4_RS04345 PF12327 FtsZ family, C-terminal domain PP4_RS04345 PF00091 Tubulin/FtsZ family, GTPase domain PP4_RS04350 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PP4_RS04360 PF07516 SecA Wing and Scaffold domain PP4_RS04360 PF01043 SecA preprotein cross-linking domain PP4_RS04360 PF07517 SecA DEAD-like domain PP4_RS04360 PF02810 SEC-C motif PP4_RS04365 PF01960 ArgJ family PP4_RS04375 PF02581 Thiamine monophosphate synthase PP4_RS04380 PF01923 Cobalamin adenosyltransferase PP4_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS04385 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS04385 PF08448 PAS fold PP4_RS04385 PF13188 PAS domain PP4_RS04385 PF00072 Response regulator receiver domain PP4_RS04390 PF02558 Ketopantoate reductase PanE/ApbA PP4_RS04390 PF08546 Ketopantoate reductase PanE/ApbA C terminal PP4_RS04395 PF04461 Protein of unknown function (DUF520) PP4_RS04400 PF05552 Conserved TM helix PP4_RS04400 PF00924 Mechanosensitive ion channel PP4_RS04405 PF07690 Major Facilitator Superfamily PP4_RS04410 PF07690 Major Facilitator Superfamily PP4_RS04430 PF04186 FxsA cytoplasmic membrane protein PP4_RS04435 PF00166 Chaperonin 10 Kd subunit PP4_RS04440 PF00118 TCP-1/cpn60 chaperonin family PP4_RS04450 PF00486 Transcriptional regulatory protein, C terminal PP4_RS04450 PF00072 Response regulator receiver domain PP4_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS04455 PF08521 Two-component sensor kinase N-terminal PP4_RS04455 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS04475 PF07690 Major Facilitator Superfamily PP4_RS04485 PF00873 AcrB/AcrD/AcrF family PP4_RS04490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS04515 PF03707 Bacterial signalling protein N terminal repeat PP4_RS04515 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS04515 PF00563 EAL domain PP4_RS04525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PP4_RS04525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PP4_RS04530 PF01810 LysE type translocator PP4_RS04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS04535 PF03466 LysR substrate binding domain PP4_RS04540 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PP4_RS04550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS04595 PF13396 Phospholipase_D-nuclease N-terminal PP4_RS04595 PF13091 PLD-like domain PP4_RS04600 PF01965 DJ-1/PfpI family PP4_RS04615 PF00795 Carbon-nitrogen hydrolase PP4_RS04615 PF00583 Acetyltransferase (GNAT) family PP4_RS04620 PF05681 Fumarate hydratase (Fumerase) PP4_RS04620 PF05683 Fumarase C-terminus PP4_RS04625 PF00970 Oxidoreductase FAD-binding domain PP4_RS04625 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS04625 PF00175 Oxidoreductase NAD-binding domain PP4_RS04630 PF00224 Pyruvate kinase, barrel domain PP4_RS04630 PF02887 Pyruvate kinase, alpha/beta domain PP4_RS04645 PF08411 Exonuclease C-terminal PP4_RS04645 PF00929 Exonuclease PP4_RS04655 PF01842 ACT domain PP4_RS04655 PF00551 Formyl transferase PP4_RS04670 PF13439 Glycosyltransferase Family 4 PP4_RS04670 PF00534 Glycosyl transferases group 1 PP4_RS04675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS04675 PF02743 Cache domain PP4_RS04675 PF00672 HAMP domain PP4_RS04680 PF05872 Bacterial protein of unknown function (DUF853) PP4_RS04685 PF01384 Phosphate transporter family PP4_RS04695 PF09339 IclR helix-turn-helix domain PP4_RS04695 PF01614 Bacterial transcriptional regulator PP4_RS04700 PF07690 Major Facilitator Superfamily PP4_RS04705 PF02803 Thiolase, C-terminal domain PP4_RS04705 PF00108 Thiolase, N-terminal domain PP4_RS04710 PF00083 Sugar (and other) transporter PP4_RS04715 PF00206 Lyase PP4_RS04715 PF10397 Adenylosuccinate lyase C-terminus PP4_RS04720 PF12146 Serine aminopeptidase, S33 PP4_RS04725 PF02627 Carboxymuconolactone decarboxylase family PP4_RS04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS04735 PF03466 LysR substrate binding domain PP4_RS04740 PF03573 outer membrane porin, OprD family PP4_RS04745 PF02321 Outer membrane efflux protein PP4_RS04750 PF00873 AcrB/AcrD/AcrF family PP4_RS04755 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS04755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS04760 PF08361 MAATS-type transcriptional repressor, C-terminal region PP4_RS04760 PF00440 Bacterial regulatory proteins, tetR family PP4_RS04765 PF07690 Major Facilitator Superfamily PP4_RS04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS04775 PF03466 LysR substrate binding domain PP4_RS04785 PF13460 NAD(P)H-binding PP4_RS04790 PF03466 LysR substrate binding domain PP4_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS04795 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS04795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS04795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS04800 PF12833 Helix-turn-helix domain PP4_RS04800 PF06719 AraC-type transcriptional regulator N-terminus PP4_RS04830 PF02661 Fic/DOC family PP4_RS04835 PF00083 Sugar (and other) transporter PP4_RS04840 PF00072 Response regulator receiver domain PP4_RS04840 PF02954 Bacterial regulatory protein, Fis family PP4_RS04840 PF00158 Sigma-54 interaction domain PP4_RS04845 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS04845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS04850 PF14310 Fibronectin type III-like domain PP4_RS04850 PF01915 Glycosyl hydrolase family 3 C-terminal domain PP4_RS04850 PF00933 Glycosyl hydrolase family 3 N terminal domain PP4_RS04870 PF00916 Sulfate permease family PP4_RS04870 PF01740 STAS domain PP4_RS04880 PF00561 alpha/beta hydrolase fold PP4_RS04885 PF00849 RNA pseudouridylate synthase PP4_RS04885 PF01479 S4 domain PP4_RS04890 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS04905 PF03167 Uracil DNA glycosylase superfamily PP4_RS04910 PF05145 Transition state regulatory protein AbrB PP4_RS04915 PF01970 Tripartite tricarboxylate transporter TctA family PP4_RS04930 PF03573 outer membrane porin, OprD family PP4_RS04935 PF00486 Transcriptional regulatory protein, C terminal PP4_RS04935 PF00072 Response regulator receiver domain PP4_RS04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS04940 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS04955 PF03937 Flavinator of succinate dehydrogenase PP4_RS04965 PF02910 Fumarate reductase flavoprotein C-term PP4_RS04965 PF00890 FAD binding domain PP4_RS04970 PF04542 Sigma-70 region 2 PP4_RS04970 PF08281 Sigma-70, region 4 PP4_RS04975 PF03873 Anti sigma-E protein RseA, C-terminal domain PP4_RS04975 PF03872 Anti sigma-E protein RseA, N-terminal domain PP4_RS04980 PF17188 MucB/RseB C-terminal domain PP4_RS04980 PF03888 MucB/RseB N-terminal domain PP4_RS04985 PF13180 PDZ domain PP4_RS04990 PF00679 Elongation factor G C-terminus PP4_RS04990 PF00009 Elongation factor Tu GTP binding domain PP4_RS04990 PF03144 Elongation factor Tu domain 2 PP4_RS04990 PF06421 GTP-binding protein LepA C-terminus PP4_RS04995 PF10502 Signal peptidase, peptidase S26 PP4_RS05000 PF00035 Double-stranded RNA binding motif PP4_RS05000 PF14622 Ribonuclease-III-like PP4_RS05005 PF01926 50S ribosome-binding GTPase PP4_RS05005 PF07650 KH domain PP4_RS05010 PF11967 Recombination protein O N terminal PP4_RS05010 PF02565 Recombination protein O C terminal PP4_RS05015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PP4_RS05020 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS05020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS05020 PF00672 HAMP domain PP4_RS05025 PF00072 Response regulator receiver domain PP4_RS05025 PF00486 Transcriptional regulatory protein, C terminal PP4_RS05035 PF08003 Protein of unknown function (DUF1698) PP4_RS05040 PF13649 Methyltransferase domain PP4_RS05050 PF02190 ATP-dependent protease La (LON) substrate-binding domain PP4_RS05050 PF05362 Lon protease (S16) C-terminal proteolytic domain PP4_RS05050 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS05055 PF01011 PQQ enzyme repeat PP4_RS05060 PF04966 Carbohydrate-selective porin, OprB family PP4_RS05065 PF00593 TonB dependent receptor PP4_RS05065 PF07715 TonB-dependent Receptor Plug Domain PP4_RS05070 PF09905 DNA-binding protein VF530 PP4_RS05080 PF04954 Siderophore-interacting protein PP4_RS05080 PF08021 Siderophore-interacting FAD-binding domain PP4_RS05085 PF03551 Transcriptional regulator PadR-like family PP4_RS05095 PF00324 Amino acid permease PP4_RS05100 PF01645 Conserved region in glutamate synthase PP4_RS05105 PF00270 DEAD/DEAH box helicase PP4_RS05105 PF08494 DEAD/H associated PP4_RS05105 PF00271 Helicase conserved C-terminal domain PP4_RS05110 PF00293 NUDIX domain PP4_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS05115 PF03466 LysR substrate binding domain PP4_RS05120 PF00561 alpha/beta hydrolase fold PP4_RS05125 PF06942 GlpM protein PP4_RS05130 PF00158 Sigma-54 interaction domain PP4_RS05130 PF02954 Bacterial regulatory protein, Fis family PP4_RS05130 PF00072 Response regulator receiver domain PP4_RS05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS05135 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS05135 PF02743 Cache domain PP4_RS05140 PF00005 ABC transporter PP4_RS05145 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS05150 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS05155 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS05165 PF01266 FAD dependent oxidoreductase PP4_RS05165 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PP4_RS05170 PF08220 DeoR-like helix-turn-helix domain PP4_RS05170 PF00455 DeoR C terminal sensor domain PP4_RS05175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PP4_RS05175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PP4_RS05180 PF00230 Major intrinsic protein PP4_RS05185 PF04073 Aminoacyl-tRNA editing domain PP4_RS05190 PF08402 TOBE domain PP4_RS05190 PF00005 ABC transporter PP4_RS05195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PP4_RS05195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PP4_RS05200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS05200 PF01568 Molydopterin dinucleotide binding domain PP4_RS05200 PF00384 Molybdopterin oxidoreductase PP4_RS05205 PF00462 Glutaredoxin PP4_RS05210 PF00210 Ferritin-like domain PP4_RS05215 PF04324 BFD-like [2Fe-2S] binding domain PP4_RS05225 PF10417 C-terminal domain of 1-Cys peroxiredoxin PP4_RS05225 PF00578 AhpC/TSA family PP4_RS05230 PF00929 Exonuclease PP4_RS05235 PF01979 Amidohydrolase family PP4_RS05245 PF00764 Arginosuccinate synthase PP4_RS05255 PF00072 Response regulator receiver domain PP4_RS05255 PF00196 Bacterial regulatory proteins, luxR family PP4_RS05265 PF00730 HhH-GPD superfamily base excision DNA repair protein PP4_RS05265 PF10576 Iron-sulfur binding domain of endonuclease III PP4_RS05265 PF00633 Helix-hairpin-helix motif PP4_RS05275 PF04205 FMN-binding domain PP4_RS05280 PF03116 NQR2, RnfD, RnfE family PP4_RS05285 PF02508 Rnf-Nqr subunit, membrane protein PP4_RS05290 PF09334 tRNA synthetases class I (M) PP4_RS05290 PF01588 Putative tRNA binding domain PP4_RS05295 PF10609 NUBPL iron-transfer P-loop NTPase PP4_RS05305 PF00313 'Cold-shock' DNA-binding domain PP4_RS05310 PF00692 dUTPase PP4_RS05325 PF00270 DEAD/DEAH box helicase PP4_RS05325 PF08494 DEAD/H associated PP4_RS05325 PF00271 Helicase conserved C-terminal domain PP4_RS05335 PF04679 ATP dependent DNA ligase C terminal region PP4_RS05335 PF01068 ATP dependent DNA ligase domain PP4_RS05335 PF04675 DNA ligase N terminus PP4_RS05340 PF04679 ATP dependent DNA ligase C terminal region PP4_RS05340 PF04675 DNA ligase N terminus PP4_RS05340 PF01068 ATP dependent DNA ligase domain PP4_RS05345 PF01804 Penicillin amidase PP4_RS05350 PF00155 Aminotransferase class I and II PP4_RS05350 PF00392 Bacterial regulatory proteins, gntR family PP4_RS05355 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS05360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PP4_RS05360 PF01411 tRNA synthetases class II (A) PP4_RS05360 PF02272 DHHA1 domain PP4_RS05365 PF07690 Major Facilitator Superfamily PP4_RS05375 PF01043 SecA preprotein cross-linking domain PP4_RS05375 PF02810 SEC-C motif PP4_RS05375 PF07517 SecA DEAD-like domain PP4_RS05375 PF07516 SecA Wing and Scaffold domain PP4_RS05385 PF02810 SEC-C motif PP4_RS05395 PF00691 OmpA family PP4_RS05395 PF05736 OprF membrane domain PP4_RS05400 PF00691 OmpA family PP4_RS05400 PF05736 OprF membrane domain PP4_RS05420 PF06733 DEAD_2 PP4_RS05420 PF13307 Helicase C-terminal domain PP4_RS05425 PF17992 Agarase CBM like domain PP4_RS05425 PF02449 Beta-galactosidase PP4_RS05430 PF00144 Beta-lactamase PP4_RS05435 PF00223 Photosystem I psaA/psaB protein PP4_RS05435 PF00691 OmpA family PP4_RS05440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PP4_RS05440 PF01243 Pyridoxamine 5'-phosphate oxidase PP4_RS05455 PF06965 Na+/H+ antiporter 1 PP4_RS05475 PF00005 ABC transporter PP4_RS05480 PF00005 ABC transporter PP4_RS05480 PF12399 Branched-chain amino acid ATP-binding cassette transporter PP4_RS05485 PF11862 Domain of unknown function (DUF3382) PP4_RS05485 PF02653 Branched-chain amino acid transport system / permease component PP4_RS05490 PF02653 Branched-chain amino acid transport system / permease component PP4_RS05495 PF13458 Periplasmic binding protein PP4_RS05510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PP4_RS05510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PP4_RS05515 PF03707 Bacterial signalling protein N terminal repeat PP4_RS05515 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS05515 PF00563 EAL domain PP4_RS05520 PF12137 RNA polymerase recycling family C-terminal PP4_RS05520 PF18337 RapA N-terminal Tudor like domain PP4_RS05520 PF18339 RapA N-terminal Tudor like domain 1 PP4_RS05520 PF00271 Helicase conserved C-terminal domain PP4_RS05520 PF00176 SNF2 family N-terminal domain PP4_RS05540 PF04632 Fusaric acid resistance protein family PP4_RS05550 PF13533 Biotin-lipoyl like PP4_RS05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS05560 PF03466 LysR substrate binding domain PP4_RS05570 PF00563 EAL domain PP4_RS05570 PF03707 Bacterial signalling protein N terminal repeat PP4_RS05570 PF13188 PAS domain PP4_RS05570 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS05575 PF05230 MASE2 domain PP4_RS05575 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS05580 PF12706 Beta-lactamase superfamily domain PP4_RS05585 PF01226 Formate/nitrite transporter PP4_RS05605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS05605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS05605 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS05615 PF00795 Carbon-nitrogen hydrolase PP4_RS05625 PF17763 Glutaminase/Asparaginase C-terminal domain PP4_RS05625 PF00710 Asparaginase, N-terminal PP4_RS05630 PF03695 Uncharacterised protein family (UPF0149) PP4_RS05630 PF02810 SEC-C motif PP4_RS05635 PF03695 Uncharacterised protein family (UPF0149) PP4_RS05635 PF02810 SEC-C motif PP4_RS05640 PF02798 Glutathione S-transferase, N-terminal domain PP4_RS05645 PF00042 Globin PP4_RS05645 PF00175 Oxidoreductase NAD-binding domain PP4_RS05645 PF00970 Oxidoreductase FAD-binding domain PP4_RS05650 PF03466 LysR substrate binding domain PP4_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS05655 PF07690 Major Facilitator Superfamily PP4_RS05670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PP4_RS05680 PF03480 Bacterial extracellular solute-binding protein, family 7 PP4_RS05685 PF08450 SMP-30/Gluconolactonase/LRE-like region PP4_RS05690 PF01370 NAD dependent epimerase/dehydratase family PP4_RS05695 PF03573 outer membrane porin, OprD family PP4_RS05700 PF00268 Ribonucleotide reductase, small chain PP4_RS05705 PF03477 ATP cone domain PP4_RS05705 PF02867 Ribonucleotide reductase, barrel domain PP4_RS05705 PF00317 Ribonucleotide reductase, all-alpha domain PP4_RS05710 PF00072 Response regulator receiver domain PP4_RS05710 PF00486 Transcriptional regulatory protein, C terminal PP4_RS05715 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS05715 PF00672 HAMP domain PP4_RS05725 PF01738 Dienelactone hydrolase family PP4_RS05735 PF00072 Response regulator receiver domain PP4_RS05735 PF00486 Transcriptional regulatory protein, C terminal PP4_RS05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS05745 PF00375 Sodium:dicarboxylate symporter family PP4_RS05750 PF18389 TrmO C-terminal domain PP4_RS05750 PF01980 tRNA-methyltransferase O PP4_RS05755 PF07308 Protein of unknown function (DUF1456) PP4_RS05765 PF03352 Methyladenine glycosylase PP4_RS05765 PF00117 Glutamine amidotransferase class-I PP4_RS05765 PF13673 Acetyltransferase (GNAT) domain PP4_RS05765 PF00958 GMP synthase C terminal domain PP4_RS05765 PF13302 Acetyltransferase (GNAT) domain PP4_RS05795 PF04055 Radical SAM superfamily PP4_RS05795 PF18693 TRAM domain PP4_RS05795 PF00919 Uncharacterized protein family UPF0004 PP4_RS05800 PF02705 K+ potassium transporter PP4_RS05810 PF09924 Uncharacterised conserved protein (DUF2156) PP4_RS05810 PF03706 Lysylphosphatidylglycerol synthase TM region PP4_RS05830 PF11798 IMS family HHH motif PP4_RS05830 PF00817 impB/mucB/samB family PP4_RS05840 PF03129 Anticodon binding domain PP4_RS05840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PP4_RS05840 PF04073 Aminoacyl-tRNA editing domain PP4_RS05845 PF03573 outer membrane porin, OprD family PP4_RS05855 PF04102 SlyX PP4_RS05860 PF00313 'Cold-shock' DNA-binding domain PP4_RS05865 PF00210 Ferritin-like domain PP4_RS05880 PF02938 GAD domain PP4_RS05880 PF00152 tRNA synthetases class II (D, K and N) PP4_RS05880 PF01336 OB-fold nucleic acid binding domain PP4_RS05885 PF01709 Transcriptional regulator PP4_RS05890 PF02075 Crossover junction endodeoxyribonuclease RuvC PP4_RS05895 PF07499 RuvA, C-terminal domain PP4_RS05895 PF01330 RuvA N terminal domain PP4_RS05900 PF05496 Holliday junction DNA helicase RuvB P-loop domain PP4_RS05900 PF05491 RuvB C-terminal winged helix domain PP4_RS05900 PF17864 RuvB AAA lid domain PP4_RS05905 PF03061 Thioesterase superfamily PP4_RS05910 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS05915 PF02472 Biopolymer transport protein ExbD/TolR PP4_RS05925 PF07676 WD40-like Beta Propeller Repeat PP4_RS05925 PF04052 TolB amino-terminal domain PP4_RS05930 PF00691 OmpA family PP4_RS05935 PF16331 TolA binding protein trimerisation PP4_RS05935 PF13525 Outer membrane lipoprotein PP4_RS05940 PF04055 Radical SAM superfamily PP4_RS05945 PF06508 Queuosine biosynthesis protein QueC PP4_RS05960 PF00672 HAMP domain PP4_RS05960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS05965 PF00324 Amino acid permease PP4_RS05975 PF02445 Quinolinate synthetase A protein PP4_RS05980 PF01435 Peptidase family M48 PP4_RS05985 PF01206 Sulfurtransferase TusA PP4_RS05990 PF01594 AI-2E family transporter PP4_RS06000 PF00578 AhpC/TSA family PP4_RS06010 PF00701 Dihydrodipicolinate synthetase family PP4_RS06015 PF06804 NlpB/DapX lipoprotein PP4_RS06020 PF00753 Metallo-beta-lactamase superfamily PP4_RS06025 PF01259 SAICAR synthetase PP4_RS06055 PF01810 LysE type translocator PP4_RS06060 PF13978 Protein of unknown function (DUF4223) PP4_RS06065 PF00593 TonB dependent receptor PP4_RS06065 PF07715 TonB-dependent Receptor Plug Domain PP4_RS06075 PF08281 Sigma-70, region 4 PP4_RS06075 PF04542 Sigma-70 region 2 PP4_RS06080 PF06039 Malate:quinone oxidoreductase (Mqo) PP4_RS06085 PF01022 Bacterial regulatory protein, arsR family PP4_RS06090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS06100 PF01266 FAD dependent oxidoreductase PP4_RS06105 PF00171 Aldehyde dehydrogenase family PP4_RS06115 PF05544 Proline racemase PP4_RS06120 PF13520 Amino acid permease PP4_RS06125 PF12833 Helix-turn-helix domain PP4_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS06130 PF03466 LysR substrate binding domain PP4_RS06135 PF00994 Probable molybdopterin binding domain PP4_RS06140 PF01062 Bestrophin, RFP-TM, chloride channel PP4_RS06145 PF04055 Radical SAM superfamily PP4_RS06145 PF06463 Molybdenum Cofactor Synthesis C PP4_RS06150 PF00384 Molybdopterin oxidoreductase PP4_RS06155 PF13404 AsnC-type helix-turn-helix domain PP4_RS06155 PF01037 Lrp/AsnC ligand binding domain PP4_RS06160 PF01053 Cys/Met metabolism PLP-dependent enzyme PP4_RS06170 PF08019 Phosphoethanolamine transferase EptA/EptB PP4_RS06170 PF00884 Sulfatase PP4_RS06175 PF01612 3'-5' exonuclease PP4_RS06175 PF00570 HRDC domain PP4_RS06180 PF05166 YcgL domain PP4_RS06185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS06190 PF00881 Nitroreductase family PP4_RS06195 PF03692 Putative zinc- or iron-chelating domain PP4_RS06210 PF00392 Bacterial regulatory proteins, gntR family PP4_RS06210 PF07729 FCD domain PP4_RS06215 PF01593 Flavin containing amine oxidoreductase PP4_RS06220 PF00083 Sugar (and other) transporter PP4_RS06225 PF00701 Dihydrodipicolinate synthetase family PP4_RS06230 PF00171 Aldehyde dehydrogenase family PP4_RS06240 PF01844 HNH endonuclease PP4_RS06250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PP4_RS06250 PF00326 Prolyl oligopeptidase family PP4_RS06260 PF13230 Glutamine amidotransferases class-II PP4_RS06275 PF03746 LamB/YcsF family PP4_RS06280 PF02682 Carboxyltransferase domain, subdomain C and D PP4_RS06285 PF02626 Carboxyltransferase domain, subdomain A and B PP4_RS06305 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS06315 PF00664 ABC transporter transmembrane region PP4_RS06315 PF00005 ABC transporter PP4_RS06320 PF00127 Copper binding proteins, plastocyanin/azurin family PP4_RS06325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PP4_RS06330 PF00975 Thioesterase domain PP4_RS06330 PF00501 AMP-binding enzyme PP4_RS06330 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06330 PF00668 Condensation domain PP4_RS06330 PF00550 Phosphopantetheine attachment site PP4_RS06335 PF00550 Phosphopantetheine attachment site PP4_RS06335 PF00501 AMP-binding enzyme PP4_RS06335 PF00668 Condensation domain PP4_RS06335 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06345 PF00550 Phosphopantetheine attachment site PP4_RS06345 PF00668 Condensation domain PP4_RS06345 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06345 PF00501 AMP-binding enzyme PP4_RS06360 PF07715 TonB-dependent Receptor Plug Domain PP4_RS06360 PF00593 TonB dependent receptor PP4_RS06360 PF07660 Secretin and TonB N terminus short domain PP4_RS06365 PF03781 Sulfatase-modifying factor enzyme 1 PP4_RS06385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PP4_RS06395 PF04542 Sigma-70 region 2 PP4_RS06395 PF08281 Sigma-70, region 4 PP4_RS06400 PF16220 Domain of unknown function (DUF4880) PP4_RS06400 PF04773 FecR protein PP4_RS06405 PF07660 Secretin and TonB N terminus short domain PP4_RS06405 PF07715 TonB-dependent Receptor Plug Domain PP4_RS06405 PF00593 TonB dependent receptor PP4_RS06420 PF05048 Periplasmic copper-binding protein (NosD) PP4_RS06430 PF03631 Virulence factor BrkB PP4_RS06435 PF01327 Polypeptide deformylase PP4_RS06460 PF03795 YCII-related domain PP4_RS06470 PF08281 Sigma-70, region 4 PP4_RS06470 PF04542 Sigma-70 region 2 PP4_RS06475 PF01575 MaoC like domain PP4_RS06480 PF12146 Serine aminopeptidase, S33 PP4_RS06485 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06485 PF00501 AMP-binding enzyme PP4_RS06490 PF00501 AMP-binding enzyme PP4_RS06490 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06495 PF01266 FAD dependent oxidoreductase PP4_RS06500 PF00120 Glutamine synthetase, catalytic domain PP4_RS06510 PF00271 Helicase conserved C-terminal domain PP4_RS06510 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PP4_RS06510 PF11898 Domain of unknown function (DUF3418) PP4_RS06510 PF00270 DEAD/DEAH box helicase PP4_RS06510 PF04408 Helicase associated domain (HA2) PP4_RS06515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PP4_RS06515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PP4_RS06530 PF00664 ABC transporter transmembrane region PP4_RS06530 PF00005 ABC transporter PP4_RS06535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PP4_RS06540 PF00561 alpha/beta hydrolase fold PP4_RS06555 PF02525 Flavodoxin-like fold PP4_RS06560 PF00892 EamA-like transporter family PP4_RS06565 PF03547 Membrane transport protein PP4_RS06570 PF00924 Mechanosensitive ion channel PP4_RS06575 PF00271 Helicase conserved C-terminal domain PP4_RS06575 PF00270 DEAD/DEAH box helicase PP4_RS06585 PF01381 Helix-turn-helix PP4_RS06590 PF05973 Phage derived protein Gp49-like (DUF891) PP4_RS06600 PF00892 EamA-like transporter family PP4_RS06610 PF03466 LysR substrate binding domain PP4_RS06610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS06620 PF00491 Arginase family PP4_RS06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS06630 PF08447 PAS fold PP4_RS06640 PF02321 Outer membrane efflux protein PP4_RS06645 PF04304 Protein of unknown function (DUF454) PP4_RS06655 PF00271 Helicase conserved C-terminal domain PP4_RS06655 PF00570 HRDC domain PP4_RS06655 PF16124 RecQ zinc-binding PP4_RS06655 PF09382 RQC domain PP4_RS06655 PF00270 DEAD/DEAH box helicase PP4_RS06665 PF01734 Patatin-like phospholipase PP4_RS06680 PF12833 Helix-turn-helix domain PP4_RS06680 PF06719 AraC-type transcriptional regulator N-terminus PP4_RS06695 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PP4_RS06695 PF12833 Helix-turn-helix domain PP4_RS06700 PF02386 Cation transport protein PP4_RS06705 PF00881 Nitroreductase family PP4_RS06710 PF16750 Sensor domain of 2-component histidine kinase PP4_RS06710 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS06710 PF00672 HAMP domain PP4_RS06720 PF00486 Transcriptional regulatory protein, C terminal PP4_RS06720 PF00072 Response regulator receiver domain PP4_RS06725 PF03795 YCII-related domain PP4_RS06730 PF04279 Intracellular septation protein A PP4_RS06735 PF02811 PHP domain PP4_RS06740 PF01300 Telomere recombination PP4_RS06745 PF02616 Segregation and condensation protein ScpA PP4_RS06750 PF04079 Segregation and condensation complex subunit ScpB PP4_RS06755 PF01479 S4 domain PP4_RS06755 PF00849 RNA pseudouridylate synthase PP4_RS06760 PF00324 Amino acid permease PP4_RS06765 PF03466 LysR substrate binding domain PP4_RS06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS06770 PF13183 4Fe-4S dicluster domain PP4_RS06770 PF02913 FAD linked oxidases, C-terminal domain PP4_RS06770 PF01565 FAD binding domain PP4_RS06775 PF07690 Major Facilitator Superfamily PP4_RS06780 PF01329 Pterin 4 alpha carbinolamine dehydratase PP4_RS06785 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PP4_RS06790 PF18024 Helix-turn-helix domain PP4_RS06790 PF00158 Sigma-54 interaction domain PP4_RS06800 PF00501 AMP-binding enzyme PP4_RS06800 PF16177 Acetyl-coenzyme A synthetase N-terminus PP4_RS06800 PF13193 AMP-binding enzyme C-terminal domain PP4_RS06805 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS06810 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS06820 PF00005 ABC transporter PP4_RS06825 PF12833 Helix-turn-helix domain PP4_RS06830 PF00202 Aminotransferase class-III PP4_RS06835 PF04958 Arginine N-succinyltransferase beta subunit PP4_RS06840 PF04958 Arginine N-succinyltransferase beta subunit PP4_RS06845 PF00171 Aldehyde dehydrogenase family PP4_RS06850 PF04996 Succinylarginine dihydrolase PP4_RS06860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PP4_RS06870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PP4_RS06870 PF01411 tRNA synthetases class II (A) PP4_RS06870 PF02272 DHHA1 domain PP4_RS06875 PF00696 Amino acid kinase family PP4_RS06875 PF01842 ACT domain PP4_RS06875 PF13840 ACT domain PP4_RS06880 PF02599 Global regulator protein family PP4_RS06905 PF01769 Divalent cation transporter PP4_RS06905 PF00571 CBS domain PP4_RS06905 PF03448 MgtE intracellular N domain PP4_RS06910 PF03869 Arc-like DNA binding domain PP4_RS06945 PF08448 PAS fold PP4_RS06945 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS06950 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS06950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PP4_RS06955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PP4_RS06955 PF00364 Biotin-requiring enzyme PP4_RS06955 PF02817 e3 binding domain PP4_RS06960 PF02780 Transketolase, C-terminal domain PP4_RS06960 PF02779 Transketolase, pyrimidine binding domain PP4_RS06965 PF00676 Dehydrogenase E1 component PP4_RS06965 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal PP4_RS06970 PF01037 Lrp/AsnC ligand binding domain PP4_RS06975 PF00120 Glutamine synthetase, catalytic domain PP4_RS06980 PF07690 Major Facilitator Superfamily PP4_RS06985 PF07238 PilZ domain PP4_RS06985 PF07317 Flagellar regulator YcgR PP4_RS07005 PF01584 CheW-like domain PP4_RS07005 PF00072 Response regulator receiver domain PP4_RS07010 PF03705 CheR methyltransferase, all-alpha domain PP4_RS07010 PF01739 CheR methyltransferase, SAM binding domain PP4_RS07015 PF00460 Flagella basal body rod protein PP4_RS07020 PF00460 Flagella basal body rod protein PP4_RS07020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PP4_RS07025 PF03963 Flagellar hook capping protein - N-terminal region PP4_RS07030 PF07559 Flagellar basal body protein FlaE PP4_RS07030 PF00460 Flagella basal body rod protein PP4_RS07030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PP4_RS07040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PP4_RS07040 PF00460 Flagella basal body rod protein PP4_RS07045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PP4_RS07045 PF00460 Flagella basal body rod protein PP4_RS07050 PF02107 Flagellar L-ring protein PP4_RS07055 PF02119 Flagellar P-ring protein PP4_RS07060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PP4_RS07060 PF10135 Rod binding protein PP4_RS07065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PP4_RS07065 PF00460 Flagella basal body rod protein PP4_RS07075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PP4_RS07075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PP4_RS07080 PF00700 Bacterial flagellin C-terminal helical region PP4_RS07080 PF00669 Bacterial flagellin N-terminal helical region PP4_RS07080 PF07196 Flagellin hook IN motif PP4_RS07085 PF03646 FlaG protein PP4_RS07090 PF07196 Flagellin hook IN motif PP4_RS07090 PF02465 Flagellar hook-associated protein 2 N-terminus PP4_RS07090 PF07195 Flagellar hook-associated protein 2 C-terminus PP4_RS07095 PF02561 Flagellar protein FliS PP4_RS07105 PF00158 Sigma-54 interaction domain PP4_RS07105 PF06490 Flagellar regulatory protein FleQ PP4_RS07105 PF02954 Bacterial regulatory protein, Fis family PP4_RS07110 PF00483 Nucleotidyl transferase PP4_RS07115 PF16363 GDP-mannose 4,6 dehydratase PP4_RS07120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PP4_RS07130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS07130 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS07130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS07135 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS07145 PF01370 NAD dependent epimerase/dehydratase family PP4_RS07165 PF00535 Glycosyl transferase family 2 PP4_RS07170 PF00535 Glycosyl transferase family 2 PP4_RS07175 PF13188 PAS domain PP4_RS07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS07175 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS07180 PF00158 Sigma-54 interaction domain PP4_RS07180 PF00072 Response regulator receiver domain PP4_RS07180 PF02954 Bacterial regulatory protein, Fis family PP4_RS07185 PF02049 Flagellar hook-basal body complex protein FliE PP4_RS07190 PF08345 Flagellar M-ring protein C-terminal PP4_RS07190 PF01514 Secretory protein of YscJ/FliF family PP4_RS07195 PF14841 FliG middle domain PP4_RS07195 PF14842 FliG N-terminal domain PP4_RS07195 PF01706 FliG C-terminal domain PP4_RS07205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PP4_RS07205 PF18269 T3SS EscN ATPase C-terminal domain PP4_RS07210 PF02050 Flagellar FliJ protein PP4_RS07215 PF13466 STAS domain PP4_RS07220 PF00072 Response regulator receiver domain PP4_RS07220 PF00486 Transcriptional regulatory protein, C terminal PP4_RS07240 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PP4_RS07240 PF02154 Flagellar motor switch protein FliM PP4_RS07245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PP4_RS07250 PF04347 Flagellar biosynthesis protein, FliO PP4_RS07255 PF00813 FliP family PP4_RS07260 PF01313 Bacterial export proteins, family 3 PP4_RS07265 PF01311 Bacterial export proteins, family 1 PP4_RS07270 PF01312 FlhB HrpN YscU SpaS Family PP4_RS07275 PF00771 FHIPEP family PP4_RS07280 PF00448 SRP54-type protein, GTPase domain PP4_RS07285 PF10609 NUBPL iron-transfer P-loop NTPase PP4_RS07290 PF04539 Sigma-70 region 3 PP4_RS07290 PF04545 Sigma-70, region 4 PP4_RS07290 PF04542 Sigma-70 region 2 PP4_RS07295 PF00072 Response regulator receiver domain PP4_RS07300 PF04344 Chemotaxis phosphatase, CheZ PP4_RS07305 PF01584 CheW-like domain PP4_RS07305 PF02895 Signal transducing histidine kinase, homodimeric domain PP4_RS07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS07305 PF01627 Hpt domain PP4_RS07305 PF00072 Response regulator receiver domain PP4_RS07310 PF01339 CheB methylesterase PP4_RS07310 PF00072 Response regulator receiver domain PP4_RS07315 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS07320 PF00691 OmpA family PP4_RS07320 PF13677 Membrane MotB of proton-channel complex MotA/MotB PP4_RS07325 PF13614 AAA domain PP4_RS07335 PF01584 CheW-like domain PP4_RS07350 PF01312 FlhB HrpN YscU SpaS Family PP4_RS07360 PF00005 ABC transporter PP4_RS07365 PF03379 CcmB protein PP4_RS07370 PF01578 Cytochrome C assembly protein PP4_RS07375 PF04995 Heme exporter protein D (CcmD) PP4_RS07380 PF03100 CcmE PP4_RS07385 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PP4_RS07385 PF01578 Cytochrome C assembly protein PP4_RS07390 PF08534 Redoxin PP4_RS07395 PF03918 Cytochrome C biogenesis protein PP4_RS07410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS07410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS07415 PF02567 Phenazine biosynthesis-like protein PP4_RS07425 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS07435 PF01266 FAD dependent oxidoreductase PP4_RS07440 PF01177 Asp/Glu/Hydantoin racemase PP4_RS07445 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS07450 PF01037 Lrp/AsnC ligand binding domain PP4_RS07460 PF01170 Putative RNA methylase family UPF0020 PP4_RS07460 PF02926 THUMP domain PP4_RS07460 PF10672 S-adenosylmethionine-dependent methyltransferase PP4_RS07465 PF00924 Mechanosensitive ion channel PP4_RS07475 PF00027 Cyclic nucleotide-binding domain PP4_RS07475 PF00520 Ion transport protein PP4_RS07485 PF00224 Pyruvate kinase, barrel domain PP4_RS07485 PF02887 Pyruvate kinase, alpha/beta domain PP4_RS07490 PF13660 Domain of unknown function (DUF4147) PP4_RS07490 PF05161 MOFRL family PP4_RS07495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PP4_RS07495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PP4_RS07500 PF01261 Xylose isomerase-like TIM barrel PP4_RS07505 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS07505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS07505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS07510 PF03928 Haem-degrading PP4_RS07515 PF00440 Bacterial regulatory proteins, tetR family PP4_RS07515 PF08360 QacR-like protein, C-terminal region PP4_RS07520 PF05661 Protein of unknown function (DUF808) PP4_RS07525 PF00884 Sulfatase PP4_RS07545 PF00860 Permease family PP4_RS07555 PF04115 Ureidoglycolate lyase PP4_RS07560 PF01014 Uricase PP4_RS07560 PF09349 OHCU decarboxylase PP4_RS07570 PF00576 HIUase/Transthyretin family PP4_RS07575 PF00860 Permease family PP4_RS07585 PF00230 Major intrinsic protein PP4_RS07590 PF01979 Amidohydrolase family PP4_RS07600 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PP4_RS07600 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS07605 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS07605 PF01799 [2Fe-2S] binding domain PP4_RS07615 PF02463 RecF/RecN/SMC N terminal domain PP4_RS07620 PF04354 ZipA, C-terminal FtsZ-binding domain PP4_RS07625 PF01653 NAD-dependent DNA ligase adenylation domain PP4_RS07625 PF00533 BRCA1 C Terminus (BRCT) domain PP4_RS07625 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PP4_RS07625 PF12826 Helix-hairpin-helix motif PP4_RS07625 PF03120 NAD-dependent DNA ligase OB-fold domain PP4_RS07670 PF12169 DNA polymerase III subunits gamma and tau domain III PP4_RS07670 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PP4_RS07670 PF12170 DNA polymerase III tau subunit V interacting with alpha PP4_RS07675 PF02575 YbaB/EbfC DNA-binding family PP4_RS07680 PF13662 Toprim domain PP4_RS07680 PF02132 RecR protein PP4_RS07685 PF00156 Phosphoribosyl transferase domain PP4_RS07690 PF13545 Crp-like helix-turn-helix domain PP4_RS07690 PF00027 Cyclic nucleotide-binding domain PP4_RS07695 PF06969 HemN C-terminal domain PP4_RS07695 PF04055 Radical SAM superfamily PP4_RS07710 PF00403 Heavy-metal-associated domain PP4_RS07720 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PP4_RS07720 PF12801 4Fe-4S binding domain PP4_RS07720 PF13746 4Fe-4S dicluster domain PP4_RS07725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS07725 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PP4_RS07740 PF00115 Cytochrome C and Quinol oxidase polypeptide I PP4_RS07745 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PP4_RS07745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS07760 PF00115 Cytochrome C and Quinol oxidase polypeptide I PP4_RS07770 PF06865 Pyrimidine/purine nucleoside phosphorylase PP4_RS07795 PF00550 Phosphopantetheine attachment site PP4_RS07795 PF00668 Condensation domain PP4_RS07795 PF13193 AMP-binding enzyme C-terminal domain PP4_RS07795 PF00501 AMP-binding enzyme PP4_RS07800 PF13098 Thioredoxin-like domain PP4_RS07805 PF00578 AhpC/TSA family PP4_RS07810 PF02683 Cytochrome C biogenesis protein transmembrane region PP4_RS07810 PF11412 Disulphide bond corrector protein DsbC PP4_RS07815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PP4_RS07820 PF01799 [2Fe-2S] binding domain PP4_RS07820 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS07825 PF00034 Cytochrome c PP4_RS07825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS07830 PF02625 XdhC and CoxI family PP4_RS07830 PF13478 XdhC Rossmann domain PP4_RS07850 PF00486 Transcriptional regulatory protein, C terminal PP4_RS07850 PF00072 Response regulator receiver domain PP4_RS07855 PF08521 Two-component sensor kinase N-terminal PP4_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS07855 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS07860 PF00202 Aminotransferase class-III PP4_RS07875 PF07859 alpha/beta hydrolase fold PP4_RS07895 PF02321 Outer membrane efflux protein PP4_RS07900 PF12704 MacB-like periplasmic core domain PP4_RS07900 PF02687 FtsX-like permease family PP4_RS07900 PF00005 ABC transporter PP4_RS07905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS07920 PF00083 Sugar (and other) transporter PP4_RS07920 PF08946 Osmosensory transporter coiled coil PP4_RS07930 PF01012 Electron transfer flavoprotein domain PP4_RS07935 PF00766 Electron transfer flavoprotein FAD-binding domain PP4_RS07935 PF01012 Electron transfer flavoprotein domain PP4_RS07950 PF00691 OmpA family PP4_RS07950 PF05736 OprF membrane domain PP4_RS07955 PF00392 Bacterial regulatory proteins, gntR family PP4_RS07955 PF00155 Aminotransferase class I and II PP4_RS07965 PF03692 Putative zinc- or iron-chelating domain PP4_RS07970 PF01852 START domain PP4_RS07975 PF00285 Citrate synthase, C-terminal domain PP4_RS07980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PP4_RS07985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PP4_RS07990 PF02910 Fumarate reductase flavoprotein C-term PP4_RS07990 PF00890 FAD binding domain PP4_RS07995 PF13085 2Fe-2S iron-sulfur cluster binding domain PP4_RS08000 PF00676 Dehydrogenase E1 component PP4_RS08000 PF16078 2-oxoglutarate dehydrogenase N-terminus PP4_RS08000 PF16870 2-oxoglutarate dehydrogenase C-terminal PP4_RS08000 PF02779 Transketolase, pyrimidine binding domain PP4_RS08005 PF00364 Biotin-requiring enzyme PP4_RS08005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PP4_RS08005 PF02817 e3 binding domain PP4_RS08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS08010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PP4_RS08015 PF00549 CoA-ligase PP4_RS08015 PF08442 ATP-grasp domain PP4_RS08020 PF02629 CoA binding domain PP4_RS08020 PF00549 CoA-ligase PP4_RS08025 PF05525 Branched-chain amino acid transport protein PP4_RS08050 PF00183 Hsp90 protein PP4_RS08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS08060 PF05726 Pirin C-terminal cupin domain PP4_RS08060 PF02678 Pirin PP4_RS08070 PF02801 Beta-ketoacyl synthase, C-terminal domain PP4_RS08070 PF00109 Beta-ketoacyl synthase, N-terminal domain PP4_RS08075 PF07977 FabA-like domain PP4_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS08080 PF00672 HAMP domain PP4_RS08080 PF01627 Hpt domain PP4_RS08080 PF00072 Response regulator receiver domain PP4_RS08080 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS08080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS08090 PF00593 TonB dependent receptor PP4_RS08090 PF07715 TonB-dependent Receptor Plug Domain PP4_RS08095 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PP4_RS08095 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PP4_RS08105 PF00300 Histidine phosphatase superfamily (branch 1) PP4_RS08120 PF12697 Alpha/beta hydrolase family PP4_RS08130 PF01594 AI-2E family transporter PP4_RS08140 PF03814 Potassium-transporting ATPase A subunit PP4_RS08150 PF02669 K+-transporting ATPase, c chain PP4_RS08155 PF13492 GAF domain PP4_RS08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS08155 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS08155 PF13493 Domain of unknown function (DUF4118) PP4_RS08155 PF02702 Osmosensitive K+ channel His kinase sensor domain PP4_RS08160 PF00486 Transcriptional regulatory protein, C terminal PP4_RS08160 PF00072 Response regulator receiver domain PP4_RS08165 PF03466 LysR substrate binding domain PP4_RS08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS08170 PF01593 Flavin containing amine oxidoreductase PP4_RS08175 PF00202 Aminotransferase class-III PP4_RS08185 PF12728 Helix-turn-helix domain PP4_RS08195 PF00005 ABC transporter PP4_RS08195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PP4_RS08200 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS08200 PF12911 N-terminal TM domain of oligopeptide transport permease C PP4_RS08205 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS08210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS08215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS08220 PF01464 Transglycosylase SLT domain PP4_RS08220 PF01476 LysM domain PP4_RS08225 PF00753 Metallo-beta-lactamase superfamily PP4_RS08225 PF16123 Hydroxyacylglutathione hydrolase C-terminus PP4_RS08235 PF00075 RNase H PP4_RS08240 PF00929 Exonuclease PP4_RS08245 PF01276 Orn/Lys/Arg decarboxylase, major domain PP4_RS08245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PP4_RS08245 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PP4_RS08255 PF03358 NADPH-dependent FMN reductase PP4_RS08265 PF03472 Autoinducer binding domain PP4_RS08265 PF00196 Bacterial regulatory proteins, luxR family PP4_RS08290 PF00361 Proton-conducting membrane transporter PP4_RS08295 PF00361 Proton-conducting membrane transporter PP4_RS08300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PP4_RS08300 PF00361 Proton-conducting membrane transporter PP4_RS08305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PP4_RS08310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PP4_RS08315 PF12838 4Fe-4S dicluster domain PP4_RS08320 PF00146 NADH dehydrogenase PP4_RS08325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS08325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PP4_RS08325 PF00384 Molybdopterin oxidoreductase PP4_RS08330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PP4_RS08330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PP4_RS08340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PP4_RS08340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PP4_RS08345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PP4_RS08350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PP4_RS08355 PF07947 YhhN family PP4_RS08360 PF00463 Isocitrate lyase family PP4_RS08370 PF00082 Subtilase family PP4_RS08370 PF17936 Bacterial Ig domain PP4_RS08375 PF01740 STAS domain PP4_RS08375 PF00916 Sulfate permease family PP4_RS08380 PF14492 Elongation Factor G, domain II PP4_RS08380 PF00679 Elongation factor G C-terminus PP4_RS08380 PF03764 Elongation factor G, domain IV PP4_RS08380 PF00009 Elongation factor Tu GTP binding domain PP4_RS08380 PF03144 Elongation factor Tu domain 2 PP4_RS08395 PF00202 Aminotransferase class-III PP4_RS08400 PF03466 LysR substrate binding domain PP4_RS08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS08405 PF00324 Amino acid permease PP4_RS08415 PF00043 Glutathione S-transferase, C-terminal domain PP4_RS08415 PF02798 Glutathione S-transferase, N-terminal domain PP4_RS08425 PF01384 Phosphate transporter family PP4_RS08430 PF04343 Protein of unknown function, DUF488 PP4_RS08450 PF08459 UvrC Helix-hairpin-helix N-terminal PP4_RS08450 PF01541 GIY-YIG catalytic domain PP4_RS08450 PF02151 UvrB/uvrC motif PP4_RS08455 PF01066 CDP-alcohol phosphatidyltransferase PP4_RS08470 PF12833 Helix-turn-helix domain PP4_RS08475 PF03958 Bacterial type II/III secretion system short domain PP4_RS08475 PF00263 Bacterial type II and III secretion system protein PP4_RS08480 PF07201 HrpJ-like domain PP4_RS08485 PF00771 FHIPEP family PP4_RS08490 PF18269 T3SS EscN ATPase C-terminal domain PP4_RS08490 PF02874 ATP synthase alpha/beta family, beta-barrel domain PP4_RS08490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PP4_RS08510 PF00813 FliP family PP4_RS08515 PF01313 Bacterial export proteins, family 3 PP4_RS08520 PF01311 Bacterial export proteins, family 1 PP4_RS08525 PF01312 FlhB HrpN YscU SpaS Family PP4_RS08570 PF03573 outer membrane porin, OprD family PP4_RS08575 PF00850 Histone deacetylase domain PP4_RS08580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS08585 PF00596 Class II Aldolase and Adducin N-terminal domain PP4_RS08590 PF00083 Sugar (and other) transporter PP4_RS08590 PF07690 Major Facilitator Superfamily PP4_RS08595 PF03466 LysR substrate binding domain PP4_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS08610 PF00717 Peptidase S24-like PP4_RS08610 PF01381 Helix-turn-helix PP4_RS08615 PF00717 Peptidase S24-like PP4_RS08620 PF02785 Biotin carboxylase C-terminal domain PP4_RS08620 PF00289 Biotin carboxylase, N-terminal domain PP4_RS08620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PP4_RS08620 PF00364 Biotin-requiring enzyme PP4_RS08630 PF01039 Carboxyl transferase domain PP4_RS08635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS08635 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS08635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS08640 PF00501 AMP-binding enzyme PP4_RS08640 PF13193 AMP-binding enzyme C-terminal domain PP4_RS08655 PF00128 Alpha amylase, catalytic domain PP4_RS08655 PF11896 Domain of unknown function (DUF3416) PP4_RS08660 PF00128 Alpha amylase, catalytic domain PP4_RS08660 PF16657 Maltogenic Amylase, C-terminal domain PP4_RS08665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PP4_RS08665 PF02806 Alpha amylase, C-terminal all-beta domain PP4_RS08665 PF00128 Alpha amylase, catalytic domain PP4_RS08675 PF03372 Endonuclease/Exonuclease/phosphatase family PP4_RS08680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PP4_RS08680 PF00128 Alpha amylase, catalytic domain PP4_RS08690 PF00128 Alpha amylase, catalytic domain PP4_RS08695 PF02446 4-alpha-glucanotransferase PP4_RS08700 PF00128 Alpha amylase, catalytic domain PP4_RS08700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PP4_RS08700 PF11941 Domain of unknown function (DUF3459) PP4_RS08705 PF00534 Glycosyl transferases group 1 PP4_RS08705 PF08323 Starch synthase catalytic domain PP4_RS08710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PP4_RS08710 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PP4_RS08715 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PP4_RS08715 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PP4_RS08720 PF00723 Glycosyl hydrolases family 15 PP4_RS08725 PF01381 Helix-turn-helix PP4_RS08730 PF00440 Bacterial regulatory proteins, tetR family PP4_RS08730 PF08362 YcdC-like protein, C-terminal region PP4_RS08735 PF01180 Dihydroorotate dehydrogenase PP4_RS08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS08740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PP4_RS08745 PF01979 Amidohydrolase family PP4_RS08750 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS08755 PF01546 Peptidase family M20/M25/M40 PP4_RS08755 PF07687 Peptidase dimerisation domain PP4_RS08765 PF12706 Beta-lactamase superfamily domain PP4_RS08775 PF08212 Lipocalin-like domain PP4_RS08785 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PP4_RS08790 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS08795 PF00293 NUDIX domain PP4_RS08795 PF09297 NADH pyrophosphatase zinc ribbon domain PP4_RS08795 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PP4_RS08800 PF01925 Sulfite exporter TauE/SafE PP4_RS08810 PF00561 alpha/beta hydrolase fold PP4_RS08815 PF01266 FAD dependent oxidoreductase PP4_RS08820 PF01751 Toprim domain PP4_RS08820 PF01131 DNA topoisomerase PP4_RS08825 PF13673 Acetyltransferase (GNAT) domain PP4_RS08830 PF08007 Cupin superfamily protein PP4_RS08835 PF08328 Adenylosuccinate lyase C-terminal PP4_RS08835 PF00206 Lyase PP4_RS08840 PF04356 Protein of unknown function (DUF489) PP4_RS08855 PF03971 Monomeric isocitrate dehydrogenase PP4_RS08860 PF00180 Isocitrate/isopropylmalate dehydrogenase PP4_RS08865 PF00313 'Cold-shock' DNA-binding domain PP4_RS08870 PF02617 ATP-dependent Clp protease adaptor protein ClpS PP4_RS08875 PF10431 C-terminal, D2-small domain, of ClpB protein PP4_RS08875 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS08875 PF07724 AAA domain (Cdc48 subfamily) PP4_RS08875 PF17871 AAA lid domain PP4_RS08875 PF02861 Clp amino terminal domain, pathogenicity island component PP4_RS08880 PF01176 Translation initiation factor 1A / IF-1 PP4_RS08885 PF04376 Arginine-tRNA-protein transferase, N terminus PP4_RS08885 PF04377 Arginine-tRNA-protein transferase, C terminus PP4_RS08890 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PP4_RS08895 PF17854 FtsK alpha domain PP4_RS08895 PF01580 FtsK/SpoIIIE family PP4_RS08895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PP4_RS08895 PF09397 Ftsk gamma domain PP4_RS08900 PF03548 Outer membrane lipoprotein carrier protein LolA PP4_RS08905 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS08905 PF16193 AAA C-terminal domain PP4_RS08905 PF12002 MgsA AAA+ ATPase C terminal PP4_RS08910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PP4_RS08915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PP4_RS08915 PF02403 Seryl-tRNA synthetase N-terminal domain PP4_RS08920 PF14824 Sirohaem biosynthesis protein central PP4_RS08920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS08920 PF10414 Sirohaem synthase dimerisation region PP4_RS08925 PF13409 Glutathione S-transferase, N-terminal domain PP4_RS08930 PF00591 Glycosyl transferase family, a/b domain PP4_RS08930 PF02885 Glycosyl transferase family, helical bundle domain PP4_RS08935 PF04358 DsrC like protein PP4_RS08945 PF02635 DsrE/DsrF-like family PP4_RS08950 PF02635 DsrE/DsrF-like family PP4_RS08955 PF00860 Permease family PP4_RS08960 PF01027 Inhibitor of apoptosis-promoting Bax1 PP4_RS08985 PF00472 RF-1 domain PP4_RS08990 PF01144 Coenzyme A transferase PP4_RS08995 PF01144 Coenzyme A transferase PP4_RS09000 PF00672 HAMP domain PP4_RS09000 PF02743 Cache domain PP4_RS09000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS09005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS09005 PF03466 LysR substrate binding domain PP4_RS09010 PF01979 Amidohydrolase family PP4_RS09020 PF00440 Bacterial regulatory proteins, tetR family PP4_RS09020 PF17938 Tetracyclin repressor-like, C-terminal domain PP4_RS09025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PP4_RS09025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS09025 PF00034 Cytochrome c PP4_RS09030 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS09030 PF01799 [2Fe-2S] binding domain PP4_RS09035 PF12802 MarR family PP4_RS09045 PF01494 FAD binding domain PP4_RS09050 PF00561 alpha/beta hydrolase fold PP4_RS09055 PF17645 Arylmalonate decarboxylase PP4_RS09060 PF00857 Isochorismatase family PP4_RS09065 PF07690 Major Facilitator Superfamily PP4_RS09070 PF03573 outer membrane porin, OprD family PP4_RS09090 PF01925 Sulfite exporter TauE/SafE PP4_RS09095 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS09100 PF03600 Citrate transporter PP4_RS09100 PF02080 TrkA-C domain PP4_RS09115 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS09130 PF08241 Methyltransferase domain PP4_RS09155 PF08496 Peptidase family S49 N-terminal PP4_RS09155 PF01343 Peptidase family S49 PP4_RS09165 PF00589 Phage integrase family PP4_RS09165 PF02899 Phage integrase, N-terminal SAM-like domain PP4_RS09205 PF00436 Single-strand binding protein family PP4_RS09265 PF07927 HicA toxin of bacterial toxin-antitoxin, PP4_RS09280 PF02586 SOS response associated peptidase (SRAP) PP4_RS09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS09285 PF03466 LysR substrate binding domain PP4_RS09290 PF12146 Serine aminopeptidase, S33 PP4_RS09310 PF00248 Aldo/keto reductase family PP4_RS09315 PF02525 Flavodoxin-like fold PP4_RS09320 PF00248 Aldo/keto reductase family PP4_RS09325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS09325 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS09330 PF00486 Transcriptional regulatory protein, C terminal PP4_RS09330 PF00072 Response regulator receiver domain PP4_RS09350 PF00501 AMP-binding enzyme PP4_RS09365 PF00107 Zinc-binding dehydrogenase PP4_RS09365 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS09375 PF07681 DoxX PP4_RS09390 PF00072 Response regulator receiver domain PP4_RS09390 PF13426 PAS domain PP4_RS09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS09395 PF06745 KaiC PP4_RS09400 PF00072 Response regulator receiver domain PP4_RS09400 PF00486 Transcriptional regulatory protein, C terminal PP4_RS09405 PF02599 Global regulator protein family PP4_RS09415 PF00005 ABC transporter PP4_RS09415 PF03459 TOBE domain PP4_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS09430 PF03060 Nitronate monooxygenase PP4_RS09445 PF00034 Cytochrome c PP4_RS09450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS09455 PF00483 Nucleotidyl transferase PP4_RS09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS09460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PP4_RS09465 PF10417 C-terminal domain of 1-Cys peroxiredoxin PP4_RS09465 PF00578 AhpC/TSA family PP4_RS09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS09470 PF13192 Thioredoxin domain PP4_RS09480 PF04337 Protein of unknown function, DUF480 PP4_RS09485 PF00375 Sodium:dicarboxylate symporter family PP4_RS09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS09490 PF03466 LysR substrate binding domain PP4_RS09500 PF03741 Integral membrane protein TerC family PP4_RS09500 PF03471 Transporter associated domain PP4_RS09510 PF01266 FAD dependent oxidoreductase PP4_RS09530 PF02824 TGS domain PP4_RS09530 PF04607 Region found in RelA / SpoT proteins PP4_RS09530 PF13291 ACT domain PP4_RS09535 PF04231 Endonuclease I PP4_RS09545 PF07715 TonB-dependent Receptor Plug Domain PP4_RS09545 PF00593 TonB dependent receptor PP4_RS09550 PF01571 Aminomethyltransferase folate-binding domain PP4_RS09550 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS09550 PF16350 FAD dependent oxidoreductase central domain PP4_RS09550 PF01266 FAD dependent oxidoreductase PP4_RS09560 PF02423 Ornithine cyclodeaminase/mu-crystallin family PP4_RS09565 PF07690 Major Facilitator Superfamily PP4_RS09575 PF00171 Aldehyde dehydrogenase family PP4_RS09580 PF13520 Amino acid permease PP4_RS09590 PF12833 Helix-turn-helix domain PP4_RS09595 PF01266 FAD dependent oxidoreductase PP4_RS09600 PF01047 MarR family PP4_RS09605 PF00440 Bacterial regulatory proteins, tetR family PP4_RS09605 PF08361 MAATS-type transcriptional repressor, C-terminal region PP4_RS09610 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS09615 PF01613 Flavin reductase like domain PP4_RS09620 PF03328 HpcH/HpaI aldolase/citrate lyase family PP4_RS09625 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS09630 PF07690 Major Facilitator Superfamily PP4_RS09640 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PP4_RS09645 PF00171 Aldehyde dehydrogenase family PP4_RS09650 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS09655 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS09665 PF01047 MarR family PP4_RS09670 PF00710 Asparaginase, N-terminal PP4_RS09670 PF17763 Glutaminase/Asparaginase C-terminal domain PP4_RS09675 PF13407 Periplasmic binding protein domain PP4_RS09680 PF00005 ABC transporter PP4_RS09685 PF02653 Branched-chain amino acid transport system / permease component PP4_RS09690 PF00356 Bacterial regulatory proteins, lacI family PP4_RS09695 PF00294 pfkB family carbohydrate kinase PP4_RS09700 PF05025 RbsD / FucU transport protein family PP4_RS09705 PF01156 Inosine-uridine preferring nucleoside hydrolase PP4_RS09720 PF00313 'Cold-shock' DNA-binding domain PP4_RS09730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PP4_RS09730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PP4_RS09730 PF03129 Anticodon binding domain PP4_RS09730 PF02824 TGS domain PP4_RS09735 PF00707 Translation initiation factor IF-3, C-terminal domain PP4_RS09735 PF05198 Translation initiation factor IF-3, N-terminal domain PP4_RS09740 PF01632 Ribosomal protein L35 PP4_RS09745 PF00453 Ribosomal protein L20 PP4_RS09750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PP4_RS09750 PF01409 tRNA synthetases class II core domain (F) PP4_RS09755 PF03483 B3/4 domain PP4_RS09755 PF01588 Putative tRNA binding domain PP4_RS09755 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PP4_RS09755 PF03484 tRNA synthetase B5 domain PP4_RS09755 PF03147 Ferredoxin-fold anticodon binding domain PP4_RS09760 PF00216 Bacterial DNA-binding protein PP4_RS09780 PF07728 AAA domain (dynein-related subfamily) PP4_RS09780 PF12102 Domain of unknown function (DUF3578) PP4_RS09805 PF13476 AAA domain PP4_RS09820 PF00264 Common central domain of tyrosinase PP4_RS09825 PF07731 Multicopper oxidase PP4_RS09825 PF07732 Multicopper oxidase PP4_RS09830 PF00155 Aminotransferase class I and II PP4_RS09830 PF00392 Bacterial regulatory proteins, gntR family PP4_RS09835 PF00892 EamA-like transporter family PP4_RS09845 PF04960 Glutaminase PP4_RS09860 PF03466 LysR substrate binding domain PP4_RS09860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS09865 PF00324 Amino acid permease PP4_RS09875 PF07690 Major Facilitator Superfamily PP4_RS09885 PF01494 FAD binding domain PP4_RS09905 PF01053 Cys/Met metabolism PLP-dependent enzyme PP4_RS09925 PF07715 TonB-dependent Receptor Plug Domain PP4_RS09925 PF00593 TonB dependent receptor PP4_RS09935 PF01593 Flavin containing amine oxidoreductase PP4_RS09940 PF00593 TonB dependent receptor PP4_RS09940 PF07715 TonB-dependent Receptor Plug Domain PP4_RS09975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS09975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS09985 PF03466 LysR substrate binding domain PP4_RS09990 PF07690 Major Facilitator Superfamily PP4_RS09995 PF00043 Glutathione S-transferase, C-terminal domain PP4_RS09995 PF13417 Glutathione S-transferase, N-terminal domain PP4_RS10010 PF03466 LysR substrate binding domain PP4_RS10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10015 PF00106 short chain dehydrogenase PP4_RS10020 PF09722 Protein of unknown function (DUF2384) PP4_RS10025 PF08808 RES domain PP4_RS10030 PF00266 Aminotransferase class-V PP4_RS10035 PF03466 LysR substrate binding domain PP4_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS10040 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS10040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS10055 PF03741 Integral membrane protein TerC family PP4_RS10065 PF08402 TOBE domain PP4_RS10065 PF00005 ABC transporter PP4_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS10085 PF00925 GTP cyclohydrolase II PP4_RS10085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PP4_RS10095 PF07859 alpha/beta hydrolase fold PP4_RS10100 PF03466 LysR substrate binding domain PP4_RS10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10105 PF00106 short chain dehydrogenase PP4_RS10120 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS10120 PF17806 Sarcosine oxidase A3 domain PP4_RS10120 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS10120 PF01571 Aminomethyltransferase folate-binding domain PP4_RS10125 PF04267 Sarcosine oxidase, delta subunit family PP4_RS10130 PF01266 FAD dependent oxidoreductase PP4_RS10135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PP4_RS10135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PP4_RS10140 PF00551 Formyl transferase PP4_RS10150 PF03621 MbtH-like protein PP4_RS10155 PF00975 Thioesterase domain PP4_RS10165 PF07759 Protein of unknown function (DUF1615) PP4_RS10180 PF00005 ABC transporter PP4_RS10210 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PP4_RS10220 PF00768 D-alanyl-D-alanine carboxypeptidase PP4_RS10265 PF08501 Shikimate dehydrogenase substrate binding domain PP4_RS10275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS10285 PF03573 outer membrane porin, OprD family PP4_RS10290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS10295 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS10295 PF00072 Response regulator receiver domain PP4_RS10295 PF08448 PAS fold PP4_RS10295 PF13188 PAS domain PP4_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS10300 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS10300 PF00072 Response regulator receiver domain PP4_RS10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS10300 PF01627 Hpt domain PP4_RS10305 PF03705 CheR methyltransferase, all-alpha domain PP4_RS10305 PF01739 CheR methyltransferase, SAM binding domain PP4_RS10310 PF01339 CheB methylesterase PP4_RS10315 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS10315 PF09456 RcsC Alpha-Beta-Loop (ABL) PP4_RS10315 PF00072 Response regulator receiver domain PP4_RS10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS10320 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS10320 PF00072 Response regulator receiver domain PP4_RS10320 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS10330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PP4_RS10330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP4_RS10335 PF02803 Thiolase, C-terminal domain PP4_RS10335 PF00108 Thiolase, N-terminal domain PP4_RS10345 PF02627 Carboxymuconolactone decarboxylase family PP4_RS10350 PF07690 Major Facilitator Superfamily PP4_RS10355 PF00155 Aminotransferase class I and II PP4_RS10355 PF00392 Bacterial regulatory proteins, gntR family PP4_RS10365 PF01274 Malate synthase PP4_RS10370 PF03928 Haem-degrading PP4_RS10375 PF13183 4Fe-4S dicluster domain PP4_RS10375 PF02754 Cysteine-rich domain PP4_RS10380 PF01565 FAD binding domain PP4_RS10385 PF02913 FAD linked oxidases, C-terminal domain PP4_RS10385 PF01565 FAD binding domain PP4_RS10390 PF07729 FCD domain PP4_RS10390 PF00392 Bacterial regulatory proteins, gntR family PP4_RS10400 PF00171 Aldehyde dehydrogenase family PP4_RS10405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS10405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS10410 PF01266 FAD dependent oxidoreductase PP4_RS10415 PF07883 Cupin domain PP4_RS10415 PF12833 Helix-turn-helix domain PP4_RS10425 PF00083 Sugar (and other) transporter PP4_RS10435 PF01266 FAD dependent oxidoreductase PP4_RS10445 PF00158 Sigma-54 interaction domain PP4_RS10450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS10450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS10455 PF03358 NADPH-dependent FMN reductase PP4_RS10460 PF00440 Bacterial regulatory proteins, tetR family PP4_RS10460 PF17932 Tetracyclin repressor-like, C-terminal domain PP4_RS10470 PF00106 short chain dehydrogenase PP4_RS10475 PF05378 Hydantoinase/oxoprolinase N-terminal region PP4_RS10475 PF01968 Hydantoinase/oxoprolinase PP4_RS10485 PF00155 Aminotransferase class I and II PP4_RS10490 PF01370 NAD dependent epimerase/dehydratase family PP4_RS10500 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS10500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS10500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS10505 PF00171 Aldehyde dehydrogenase family PP4_RS10510 PF00392 Bacterial regulatory proteins, gntR family PP4_RS10510 PF07729 FCD domain PP4_RS10515 PF13458 Periplasmic binding protein PP4_RS10520 PF02653 Branched-chain amino acid transport system / permease component PP4_RS10525 PF11862 Domain of unknown function (DUF3382) PP4_RS10525 PF02653 Branched-chain amino acid transport system / permease component PP4_RS10530 PF00005 ABC transporter PP4_RS10530 PF12399 Branched-chain amino acid ATP-binding cassette transporter PP4_RS10535 PF00005 ABC transporter PP4_RS10540 PF03717 Penicillin-binding Protein dimerisation domain PP4_RS10540 PF00905 Penicillin binding protein transpeptidase domain PP4_RS10545 PF07690 Major Facilitator Superfamily PP4_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10550 PF03466 LysR substrate binding domain PP4_RS10555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS10555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS10555 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS10560 PF07690 Major Facilitator Superfamily PP4_RS10565 PF00171 Aldehyde dehydrogenase family PP4_RS10570 PF03573 outer membrane porin, OprD family PP4_RS10585 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS10585 PF00175 Oxidoreductase NAD-binding domain PP4_RS10590 PF00355 Rieske [2Fe-2S] domain PP4_RS10600 PF00005 ABC transporter PP4_RS10605 PF02687 FtsX-like permease family PP4_RS10605 PF12704 MacB-like periplasmic core domain PP4_RS10615 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS10620 PF13977 BetI-type transcriptional repressor, C-terminal PP4_RS10620 PF00440 Bacterial regulatory proteins, tetR family PP4_RS10625 PF00486 Transcriptional regulatory protein, C terminal PP4_RS10625 PF00072 Response regulator receiver domain PP4_RS10635 PF00072 Response regulator receiver domain PP4_RS10635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS10635 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS10635 PF00672 HAMP domain PP4_RS10635 PF01627 Hpt domain PP4_RS10635 PF17149 Periplasmic sensor domain found in signal transduction proteins PP4_RS10640 PF00324 Amino acid permease PP4_RS10645 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS10650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS10650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS10650 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS10660 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS10660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS10660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS10665 PF01168 Alanine racemase, N-terminal domain PP4_RS10665 PF00842 Alanine racemase, C-terminal domain PP4_RS10670 PF00155 Aminotransferase class I and II PP4_RS10675 PF00171 Aldehyde dehydrogenase family PP4_RS10680 PF02525 Flavodoxin-like fold PP4_RS10685 PF13416 Bacterial extracellular solute-binding protein PP4_RS10690 PF00202 Aminotransferase class-III PP4_RS10700 PF13426 PAS domain PP4_RS10700 PF00563 EAL domain PP4_RS10700 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS10700 PF05231 MASE1 PP4_RS10700 PF08447 PAS fold PP4_RS10700 PF08448 PAS fold PP4_RS10705 PF00175 Oxidoreductase NAD-binding domain PP4_RS10705 PF00970 Oxidoreductase FAD-binding domain PP4_RS10705 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS10710 PF00355 Rieske [2Fe-2S] domain PP4_RS10710 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PP4_RS10715 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS10720 PF00180 Isocitrate/isopropylmalate dehydrogenase PP4_RS10725 PF03466 LysR substrate binding domain PP4_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10730 PF01037 Lrp/AsnC ligand binding domain PP4_RS10735 PF00850 Histone deacetylase domain PP4_RS10740 PF00324 Amino acid permease PP4_RS10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10745 PF03466 LysR substrate binding domain PP4_RS10750 PF13378 Enolase C-terminal domain-like PP4_RS10750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PP4_RS10755 PF02426 Muconolactone delta-isomerase PP4_RS10760 PF04444 Catechol dioxygenase N terminus PP4_RS10760 PF00775 Dioxygenase PP4_RS10770 PF08447 PAS fold PP4_RS10770 PF00563 EAL domain PP4_RS10770 PF08448 PAS fold PP4_RS10770 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS10775 PF00248 Aldo/keto reductase family PP4_RS10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10785 PF03466 LysR substrate binding domain PP4_RS10790 PF00141 Peroxidase PP4_RS10795 PF00557 Metallopeptidase family M24 PP4_RS10795 PF01321 Creatinase/Prolidase N-terminal domain PP4_RS10800 PF00083 Sugar (and other) transporter PP4_RS10800 PF08946 Osmosensory transporter coiled coil PP4_RS10805 PF12833 Helix-turn-helix domain PP4_RS10805 PF01965 DJ-1/PfpI family PP4_RS10810 PF13091 PLD-like domain PP4_RS10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10820 PF03466 LysR substrate binding domain PP4_RS10825 PF13426 PAS domain PP4_RS10825 PF08448 PAS fold PP4_RS10825 PF00563 EAL domain PP4_RS10825 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS10825 PF08447 PAS fold PP4_RS10825 PF05231 MASE1 PP4_RS10830 PF03641 Possible lysine decarboxylase PP4_RS10830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PP4_RS10830 PF11892 Domain of unknown function (DUF3412) PP4_RS10835 PF03601 Conserved hypothetical protein 698 PP4_RS10840 PF03466 LysR substrate binding domain PP4_RS10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10845 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PP4_RS10845 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PP4_RS10865 PF13426 PAS domain PP4_RS10865 PF07568 Histidine kinase PP4_RS10865 PF13581 Histidine kinase-like ATPase domain PP4_RS10870 PF00083 Sugar (and other) transporter PP4_RS10875 PF04966 Carbohydrate-selective porin, OprB family PP4_RS10885 PF00775 Dioxygenase PP4_RS10885 PF04444 Catechol dioxygenase N terminus PP4_RS10890 PF03466 LysR substrate binding domain PP4_RS10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10895 PF00465 Iron-containing alcohol dehydrogenase PP4_RS10905 PF03466 LysR substrate binding domain PP4_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS10920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PP4_RS10920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PP4_RS10925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PP4_RS10925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PP4_RS10930 PF13407 Periplasmic binding protein domain PP4_RS10935 PF00005 ABC transporter PP4_RS10940 PF02653 Branched-chain amino acid transport system / permease component PP4_RS10950 PF00356 Bacterial regulatory proteins, lacI family PP4_RS10955 PF13360 PQQ-like domain PP4_RS10955 PF01011 PQQ enzyme repeat PP4_RS10960 PF00296 Luciferase-like monooxygenase PP4_RS10965 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS10970 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS10985 PF00120 Glutamine synthetase, catalytic domain PP4_RS10995 PF01493 GXGXG motif PP4_RS11000 PF01645 Conserved region in glutamate synthase PP4_RS11005 PF00909 Ammonium Transporter Family PP4_RS11010 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS11015 PF01037 Lrp/AsnC ligand binding domain PP4_RS11025 PF00072 Response regulator receiver domain PP4_RS11025 PF13426 PAS domain PP4_RS11025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS11030 PF00293 NUDIX domain PP4_RS11030 PF09297 NADH pyrophosphatase zinc ribbon domain PP4_RS11035 PF07729 FCD domain PP4_RS11035 PF00392 Bacterial regulatory proteins, gntR family PP4_RS11040 PF02627 Carboxymuconolactone decarboxylase family PP4_RS11045 PF01613 Flavin reductase like domain PP4_RS11050 PF00171 Aldehyde dehydrogenase family PP4_RS11055 PF12697 Alpha/beta hydrolase family PP4_RS11065 PF00296 Luciferase-like monooxygenase PP4_RS11070 PF01613 Flavin reductase like domain PP4_RS11075 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS11080 PF00672 HAMP domain PP4_RS11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS11080 PF12729 Four helix bundle sensory module for signal transduction PP4_RS11085 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS11105 PF12833 Helix-turn-helix domain PP4_RS11105 PF12852 Cupin PP4_RS11120 PF00005 ABC transporter PP4_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS11140 PF01118 Semialdehyde dehydrogenase, NAD binding domain PP4_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11145 PF03466 LysR substrate binding domain PP4_RS11155 PF08239 Bacterial SH3 domain PP4_RS11160 PF03573 outer membrane porin, OprD family PP4_RS11170 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS11200 PF00034 Cytochrome c PP4_RS11200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS11205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PP4_RS11210 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS11210 PF01799 [2Fe-2S] binding domain PP4_RS11215 PF18381 YcaO cyclodehydratase C-terminal domain PP4_RS11215 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PP4_RS11220 PF13649 Methyltransferase domain PP4_RS11245 PF07995 Glucose / Sorbosone dehydrogenase PP4_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11260 PF03466 LysR substrate binding domain PP4_RS11265 PF04143 Sulphur transport PP4_RS11270 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS11270 PF00107 Zinc-binding dehydrogenase PP4_RS11275 PF03466 LysR substrate binding domain PP4_RS11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11290 PF00392 Bacterial regulatory proteins, gntR family PP4_RS11290 PF07729 FCD domain PP4_RS11295 PF00171 Aldehyde dehydrogenase family PP4_RS11300 PF08666 SAF domain PP4_RS11300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PP4_RS11305 PF07690 Major Facilitator Superfamily PP4_RS11310 PF00701 Dihydrodipicolinate synthetase family PP4_RS11315 PF07722 Peptidase C26 PP4_RS11320 PF00005 ABC transporter PP4_RS11325 PF01266 FAD dependent oxidoreductase PP4_RS11330 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS11335 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS11340 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS11350 PF02615 Malate/L-lactate dehydrogenase PP4_RS11355 PF00155 Aminotransferase class I and II PP4_RS11370 PF08534 Redoxin PP4_RS11375 PF13533 Biotin-lipoyl like PP4_RS11380 PF00873 AcrB/AcrD/AcrF family PP4_RS11385 PF00873 AcrB/AcrD/AcrF family PP4_RS11390 PF02321 Outer membrane efflux protein PP4_RS11395 PF03707 Bacterial signalling protein N terminal repeat PP4_RS11395 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS11395 PF00563 EAL domain PP4_RS11410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PP4_RS11410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PP4_RS11410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PP4_RS11410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PP4_RS11415 PF04542 Sigma-70 region 2 PP4_RS11415 PF08281 Sigma-70, region 4 PP4_RS11420 PF16220 Domain of unknown function (DUF4880) PP4_RS11420 PF04773 FecR protein PP4_RS11425 PF07715 TonB-dependent Receptor Plug Domain PP4_RS11425 PF00593 TonB dependent receptor PP4_RS11430 PF03466 LysR substrate binding domain PP4_RS11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11435 PF04909 Amidohydrolase PP4_RS11440 PF07690 Major Facilitator Superfamily PP4_RS11455 PF01042 Endoribonuclease L-PSP PP4_RS11470 PF07687 Peptidase dimerisation domain PP4_RS11470 PF01546 Peptidase family M20/M25/M40 PP4_RS11475 PF04966 Carbohydrate-selective porin, OprB family PP4_RS11480 PF01011 PQQ enzyme repeat PP4_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11490 PF03466 LysR substrate binding domain PP4_RS11495 PF07690 Major Facilitator Superfamily PP4_RS11500 PF01810 LysE type translocator PP4_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11525 PF03466 LysR substrate binding domain PP4_RS11530 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS11540 PF00672 HAMP domain PP4_RS11540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS11545 PF13726 Na+-H+ antiporter family PP4_RS11545 PF03553 Na+/H+ antiporter family PP4_RS11555 PF12806 Acetyl-CoA dehydrogenase C-terminal like PP4_RS11555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS11555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS11555 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS11560 PF00501 AMP-binding enzyme PP4_RS11560 PF13193 AMP-binding enzyme C-terminal domain PP4_RS11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS11565 PF00989 PAS fold PP4_RS11565 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS11570 PF00196 Bacterial regulatory proteins, luxR family PP4_RS11570 PF00072 Response regulator receiver domain PP4_RS11575 PF01047 MarR family PP4_RS11580 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS11580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS11585 PF07690 Major Facilitator Superfamily PP4_RS11595 PF00072 Response regulator receiver domain PP4_RS11595 PF13426 PAS domain PP4_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS11600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS11600 PF00072 Response regulator receiver domain PP4_RS11600 PF13426 PAS domain PP4_RS11605 PF00155 Aminotransferase class I and II PP4_RS11605 PF00392 Bacterial regulatory proteins, gntR family PP4_RS11610 PF12801 4Fe-4S binding domain PP4_RS11610 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PP4_RS11610 PF13746 4Fe-4S dicluster domain PP4_RS11620 PF02308 MgtC family PP4_RS11625 PF00682 HMGL-like PP4_RS11630 PF13411 MerR HTH family regulatory protein PP4_RS11635 PF12833 Helix-turn-helix domain PP4_RS11635 PF02311 AraC-like ligand binding domain PP4_RS11640 PF01494 FAD binding domain PP4_RS11655 PF03466 LysR substrate binding domain PP4_RS11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11665 PF02423 Ornithine cyclodeaminase/mu-crystallin family PP4_RS11670 PF01037 Lrp/AsnC ligand binding domain PP4_RS11675 PF00324 Amino acid permease PP4_RS11680 PF01852 START domain PP4_RS11695 PF05593 RHS Repeat PP4_RS11695 PF03527 RHS protein PP4_RS11695 PF14220 Domain of unknown function (DUF4329) PP4_RS11700 PF05899 Protein of unknown function (DUF861) PP4_RS11700 PF07883 Cupin domain PP4_RS11705 PF00296 Luciferase-like monooxygenase PP4_RS11710 PF09084 NMT1/THI5 like PP4_RS11720 PF00892 EamA-like transporter family PP4_RS11725 PF00440 Bacterial regulatory proteins, tetR family PP4_RS11725 PF17938 Tetracyclin repressor-like, C-terminal domain PP4_RS11730 PF12833 Helix-turn-helix domain PP4_RS11730 PF01965 DJ-1/PfpI family PP4_RS11755 PF00892 EamA-like transporter family PP4_RS11770 PF11737 Protein of unknown function (DUF3300) PP4_RS11785 PF05378 Hydantoinase/oxoprolinase N-terminal region PP4_RS11785 PF01968 Hydantoinase/oxoprolinase PP4_RS11790 PF02538 Hydantoinase B/oxoprolinase PP4_RS11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11795 PF03466 LysR substrate binding domain PP4_RS11805 PF01063 Amino-transferase class IV PP4_RS11810 PF12848 ABC transporter PP4_RS11810 PF00005 ABC transporter PP4_RS11825 PF02492 CobW/HypB/UreG, nucleotide-binding domain PP4_RS11825 PF07683 Cobalamin synthesis protein cobW C-terminal domain PP4_RS11830 PF02514 CobN/Magnesium Chelatase PP4_RS11835 PF07728 AAA domain (dynein-related subfamily) PP4_RS11835 PF13519 von Willebrand factor type A domain PP4_RS11835 PF17863 AAA lid domain PP4_RS11850 PF00158 Sigma-54 interaction domain PP4_RS11850 PF00072 Response regulator receiver domain PP4_RS11850 PF02954 Bacterial regulatory protein, Fis family PP4_RS11855 PF01136 Peptidase family U32 PP4_RS11855 PF12392 Collagenase PP4_RS11870 PF00239 Resolvase, N terminal domain PP4_RS11870 PF02796 Helix-turn-helix domain of resolvase PP4_RS11940 PF04816 tRNA (adenine(22)-N(1))-methyltransferase PP4_RS11950 PF03466 LysR substrate binding domain PP4_RS11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS11955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS11955 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS11955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS11965 PF16957 Malonate decarboxylase, alpha subunit, transporter PP4_RS11970 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PP4_RS11975 PF06857 Malonate decarboxylase delta subunit (MdcD) PP4_RS11980 PF01039 Carboxyl transferase domain PP4_RS11990 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PP4_RS11995 PF00698 Acyl transferase domain PP4_RS12040 PF00072 Response regulator receiver domain PP4_RS12040 PF00486 Transcriptional regulatory protein, C terminal PP4_RS12045 PF00437 Type II/IV secretion system protein PP4_RS12070 PF00263 Bacterial type II and III secretion system protein PP4_RS12070 PF03958 Bacterial type II/III secretion system short domain PP4_RS12075 PF08334 Type II secretion system (T2SS), protein G PP4_RS12075 PF07963 Prokaryotic N-terminal methylation motif PP4_RS12080 PF08334 Type II secretion system (T2SS), protein G PP4_RS12080 PF07963 Prokaryotic N-terminal methylation motif PP4_RS12095 PF10614 Type VIII secretion system (T8SS), CsgF protein PP4_RS12100 PF03783 Curli production assembly/transport component CsgG PP4_RS12110 PF01590 GAF domain PP4_RS12110 PF02954 Bacterial regulatory protein, Fis family PP4_RS12110 PF00158 Sigma-54 interaction domain PP4_RS12115 PF00664 ABC transporter transmembrane region PP4_RS12115 PF00005 ABC transporter PP4_RS12135 PF00171 Aldehyde dehydrogenase family PP4_RS12150 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit PP4_RS12160 PF13193 AMP-binding enzyme C-terminal domain PP4_RS12160 PF00501 AMP-binding enzyme PP4_RS12165 PF12804 MobA-like NTP transferase domain PP4_RS12170 PF00873 AcrB/AcrD/AcrF family PP4_RS12175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS12175 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS12180 PF00486 Transcriptional regulatory protein, C terminal PP4_RS12180 PF00072 Response regulator receiver domain PP4_RS12185 PF00672 HAMP domain PP4_RS12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS12185 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS12190 PF17158 Membrane-associated sensor, integral membrane domain PP4_RS12190 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS12195 PF14488 Domain of unknown function (DUF4434) PP4_RS12205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PP4_RS12205 PF13632 Glycosyl transferase family group 2 PP4_RS12215 PF00585 C-terminal regulatory domain of Threonine dehydratase PP4_RS12215 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS12230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PP4_RS12230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PP4_RS12240 PF02540 NAD synthase PP4_RS12240 PF00795 Carbon-nitrogen hydrolase PP4_RS12250 PF00149 Calcineurin-like phosphoesterase PP4_RS12265 PF01810 LysE type translocator PP4_RS12270 PF03797 Autotransporter beta-domain PP4_RS12280 PF03974 Ecotin PP4_RS12285 PF00106 short chain dehydrogenase PP4_RS12290 PF12911 N-terminal TM domain of oligopeptide transport permease C PP4_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS12295 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS12300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS12305 PF05698 Bacterial trigger factor protein (TF) C-terminus PP4_RS12310 PF00793 DAHP synthetase I family PP4_RS12315 PF01161 Phosphatidylethanolamine-binding protein PP4_RS12325 PF07690 Major Facilitator Superfamily PP4_RS12335 PF13533 Biotin-lipoyl like PP4_RS12345 PF00593 TonB dependent receptor PP4_RS12345 PF07715 TonB-dependent Receptor Plug Domain PP4_RS12350 PF04773 FecR protein PP4_RS12350 PF16220 Domain of unknown function (DUF4880) PP4_RS12355 PF04542 Sigma-70 region 2 PP4_RS12355 PF08281 Sigma-70, region 4 PP4_RS12360 PF17755 UvrA DNA-binding domain PP4_RS12375 PF06761 Intracellular multiplication and human macrophage-killing PP4_RS12375 PF06744 Type VI secretion protein IcmF C-terminal PP4_RS12375 PF14331 ImcF-related N-terminal domain PP4_RS12385 PF14331 ImcF-related N-terminal domain PP4_RS12385 PF06761 Intracellular multiplication and human macrophage-killing PP4_RS12385 PF06744 Type VI secretion protein IcmF C-terminal PP4_RS12395 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PP4_RS12405 PF17871 AAA lid domain PP4_RS12405 PF10431 C-terminal, D2-small domain, of ClpB protein PP4_RS12405 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS12405 PF07724 AAA domain (Cdc48 subfamily) PP4_RS12415 PF05947 Type VI secretion system, TssF PP4_RS12425 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PP4_RS12445 PF03747 ADP-ribosylglycohydrolase PP4_RS12460 PF18660 Tsi6 PP4_RS12465 PF05488 PAAR motif PP4_RS12465 PF15538 Bacterial toxin 46 PP4_RS12480 PF01129 NAD:arginine ADP-ribosyltransferase PP4_RS12490 PF04717 Type VI secretion system, phage-baseplate injector PP4_RS12490 PF06715 Gp5 C-terminal repeat (3 copies) PP4_RS12505 PF03527 RHS protein PP4_RS12505 PF05593 RHS Repeat PP4_RS12520 PF03527 RHS protein PP4_RS12540 PF07687 Peptidase dimerisation domain PP4_RS12540 PF01546 Peptidase family M20/M25/M40 PP4_RS12545 PF07690 Major Facilitator Superfamily PP4_RS12550 PF01425 Amidase PP4_RS12555 PF09339 IclR helix-turn-helix domain PP4_RS12555 PF01614 Bacterial transcriptional regulator PP4_RS12570 PF00890 FAD binding domain PP4_RS12580 PF07690 Major Facilitator Superfamily PP4_RS12585 PF03466 LysR substrate binding domain PP4_RS12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12590 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS12595 PF01726 LexA DNA binding domain PP4_RS12595 PF00717 Peptidase S24-like PP4_RS12610 PF01336 OB-fold nucleic acid binding domain PP4_RS12610 PF02811 PHP domain PP4_RS12610 PF14579 Helix-hairpin-helix motif PP4_RS12610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PP4_RS12610 PF07733 Bacterial DNA polymerase III alpha NTPase domain PP4_RS12615 PF00248 Aldo/keto reductase family PP4_RS12620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12620 PF03466 LysR substrate binding domain PP4_RS12625 PF01144 Coenzyme A transferase PP4_RS12630 PF01144 Coenzyme A transferase PP4_RS12635 PF02667 Short chain fatty acid transporter PP4_RS12640 PF01381 Helix-turn-helix PP4_RS12640 PF08671 Anti-repressor SinI PP4_RS12665 PF16363 GDP-mannose 4,6 dehydratase PP4_RS12685 PF00732 GMC oxidoreductase PP4_RS12685 PF05199 GMC oxidoreductase PP4_RS12685 PF00732 GMC oxidoreductase PP4_RS12685 PF05199 GMC oxidoreductase PP4_RS12690 PF12464 Maltose acetyltransferase PP4_RS12690 PF14602 Hexapeptide repeat of succinyl-transferase PP4_RS12690 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS12705 PF00535 Glycosyl transferase family 2 PP4_RS12710 PF04393 Protein of unknown function (DUF535) PP4_RS12715 PF13439 Glycosyltransferase Family 4 PP4_RS12715 PF00534 Glycosyl transferases group 1 PP4_RS12730 PF02397 Bacterial sugar transferase PP4_RS12735 PF03466 LysR substrate binding domain PP4_RS12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12740 PF03315 Serine dehydratase beta chain PP4_RS12740 PF03313 Serine dehydratase alpha chain PP4_RS12745 PF11769 Protein of unknown function (DUF3313) PP4_RS12750 PF01266 FAD dependent oxidoreductase PP4_RS12755 PF13416 Bacterial extracellular solute-binding protein PP4_RS12760 PF00120 Glutamine synthetase, catalytic domain PP4_RS12775 PF00171 Aldehyde dehydrogenase family PP4_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12780 PF03466 LysR substrate binding domain PP4_RS12790 PF09411 Lipid A 3-O-deacylase (PagL) PP4_RS12800 PF00459 Inositol monophosphatase family PP4_RS12810 PF12146 Serine aminopeptidase, S33 PP4_RS12815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12815 PF03466 LysR substrate binding domain PP4_RS12820 PF00571 CBS domain PP4_RS12820 PF00005 ABC transporter PP4_RS12825 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS12830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS12835 PF12833 Helix-turn-helix domain PP4_RS12835 PF01965 DJ-1/PfpI family PP4_RS12840 PF14525 AraC-binding-like domain PP4_RS12840 PF12833 Helix-turn-helix domain PP4_RS12845 PF00355 Rieske [2Fe-2S] domain PP4_RS12845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PP4_RS12850 PF00866 Ring hydroxylating beta subunit PP4_RS12855 PF00175 Oxidoreductase NAD-binding domain PP4_RS12855 PF00970 Oxidoreductase FAD-binding domain PP4_RS12855 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS12860 PF00106 short chain dehydrogenase PP4_RS12865 PF07690 Major Facilitator Superfamily PP4_RS12870 PF03594 Benzoate membrane transport protein PP4_RS12875 PF03573 outer membrane porin, OprD family PP4_RS12890 PF03466 LysR substrate binding domain PP4_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12895 PF00313 'Cold-shock' DNA-binding domain PP4_RS12900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) PP4_RS12905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS12910 PF00248 Aldo/keto reductase family PP4_RS12915 PF14759 Reductase C-terminal PP4_RS12915 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS12920 PF07690 Major Facilitator Superfamily PP4_RS12925 PF05651 Putative sugar diacid recognition PP4_RS12925 PF17853 GGDEF-like domain PP4_RS12925 PF13556 PucR C-terminal helix-turn-helix domain PP4_RS12930 PF02595 Glycerate kinase family PP4_RS12935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS12935 PF03466 LysR substrate binding domain PP4_RS12950 PF00563 EAL domain PP4_RS12950 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS12950 PF03707 Bacterial signalling protein N terminal repeat PP4_RS12955 PF02630 SCO1/SenC PP4_RS12970 PF03070 TENA/THI-4/PQQC family PP4_RS12975 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS12985 PF07969 Amidohydrolase family PP4_RS12990 PF02423 Ornithine cyclodeaminase/mu-crystallin family PP4_RS12995 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS13000 PF08348 YheO-like PAS domain PP4_RS13000 PF13309 HTH domain PP4_RS13020 PF00583 Acetyltransferase (GNAT) family PP4_RS13025 PF02308 MgtC family PP4_RS13030 PF04116 Fatty acid hydroxylase superfamily PP4_RS13040 PF04261 Dyp-type peroxidase family PP4_RS13045 PF00248 Aldo/keto reductase family PP4_RS13070 PF17827 PrmC N-terminal domain PP4_RS13070 PF05175 Methyltransferase small domain PP4_RS13075 PF04107 Glutamate-cysteine ligase family 2(GCS2) PP4_RS13095 PF00293 NUDIX domain PP4_RS13110 PF00072 Response regulator receiver domain PP4_RS13110 PF00196 Bacterial regulatory proteins, luxR family PP4_RS13115 PF00072 Response regulator receiver domain PP4_RS13115 PF01627 Hpt domain PP4_RS13115 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS13125 PF01575 MaoC like domain PP4_RS13125 PF00171 Aldehyde dehydrogenase family PP4_RS13130 PF03573 outer membrane porin, OprD family PP4_RS13135 PF00474 Sodium:solute symporter family PP4_RS13140 PF04341 Protein of unknown function, DUF485 PP4_RS13145 PF00970 Oxidoreductase FAD-binding domain PP4_RS13145 PF00175 Oxidoreductase NAD-binding domain PP4_RS13145 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS13150 PF01883 Iron-sulfur cluster assembly protein PP4_RS13155 PF05138 Phenylacetic acid catabolic protein PP4_RS13160 PF06243 Phenylacetic acid degradation B PP4_RS13165 PF05138 Phenylacetic acid catabolic protein PP4_RS13170 PF14535 AMP-binding enzyme C-terminal domain PP4_RS13170 PF00501 AMP-binding enzyme PP4_RS13175 PF00108 Thiolase, N-terminal domain PP4_RS13175 PF02803 Thiolase, C-terminal domain PP4_RS13180 PF03061 Thioesterase superfamily PP4_RS13185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP4_RS13185 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PP4_RS13185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PP4_RS13190 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS13195 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS13200 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS13205 PF07848 PaaX-like protein PP4_RS13205 PF08223 PaaX-like protein C-terminal domain PP4_RS13210 PF00027 Cyclic nucleotide-binding domain PP4_RS13210 PF00325 Bacterial regulatory proteins, crp family PP4_RS13225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PP4_RS13225 PF00753 Metallo-beta-lactamase superfamily PP4_RS13225 PF10996 Beta-Casp domain PP4_RS13260 PF04244 Deoxyribodipyrimidine photo-lyase-related protein PP4_RS13285 PF01740 STAS domain PP4_RS13285 PF13426 PAS domain PP4_RS13290 PF13411 MerR HTH family regulatory protein PP4_RS13295 PF01370 NAD dependent epimerase/dehydratase family PP4_RS13305 PF00665 Integrase core domain PP4_RS13305 PF13276 HTH-like domain PP4_RS13305 PF13333 Integrase core domain PP4_RS13310 PF01527 Transposase PP4_RS13315 PF13195 Protein of unknown function (DUF4011) PP4_RS13315 PF13086 AAA domain PP4_RS13315 PF13087 AAA domain PP4_RS13315 PF13086 AAA domain PP4_RS13315 PF13195 Protein of unknown function (DUF4011) PP4_RS13315 PF13087 AAA domain PP4_RS13335 PF07690 Major Facilitator Superfamily PP4_RS13340 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PP4_RS13340 PF08666 SAF domain PP4_RS13345 PF04303 PrpF protein PP4_RS13350 PF03737 Aldolase/RraA PP4_RS13355 PF02585 GlcNAc-PI de-N-acetylase PP4_RS13360 PF03466 LysR substrate binding domain PP4_RS13360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS13365 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PP4_RS13365 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit PP4_RS13370 PF07690 Major Facilitator Superfamily PP4_RS13375 PF00155 Aminotransferase class I and II PP4_RS13380 PF03737 Aldolase/RraA PP4_RS13385 PF03737 Aldolase/RraA PP4_RS13395 PF03466 LysR substrate binding domain PP4_RS13395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS13400 PF00561 alpha/beta hydrolase fold PP4_RS13405 PF01235 Sodium:alanine symporter family PP4_RS13410 PF00083 Sugar (and other) transporter PP4_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS13415 PF03466 LysR substrate binding domain PP4_RS13425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS13425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS13430 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13435 PF02515 CoA-transferase family III PP4_RS13440 PF01012 Electron transfer flavoprotein domain PP4_RS13445 PF01012 Electron transfer flavoprotein domain PP4_RS13445 PF00766 Electron transfer flavoprotein FAD-binding domain PP4_RS13455 PF03328 HpcH/HpaI aldolase/citrate lyase family PP4_RS13470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS13470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS13470 PF01842 ACT domain PP4_RS13475 PF00083 Sugar (and other) transporter PP4_RS13485 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS13485 PF00072 Response regulator receiver domain PP4_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS13490 PF13426 PAS domain PP4_RS13490 PF00072 Response regulator receiver domain PP4_RS13495 PF00881 Nitroreductase family PP4_RS13505 PF00355 Rieske [2Fe-2S] domain PP4_RS13510 PF00106 short chain dehydrogenase PP4_RS13515 PF00106 short chain dehydrogenase PP4_RS13535 PF02803 Thiolase, C-terminal domain PP4_RS13535 PF00108 Thiolase, N-terminal domain PP4_RS13540 PF01575 MaoC like domain PP4_RS13555 PF02803 Thiolase, C-terminal domain PP4_RS13555 PF00108 Thiolase, N-terminal domain PP4_RS13560 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13565 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13570 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS13580 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS13590 PF01144 Coenzyme A transferase PP4_RS13595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS13600 PF01575 MaoC like domain PP4_RS13620 PF00501 AMP-binding enzyme PP4_RS13620 PF13193 AMP-binding enzyme C-terminal domain PP4_RS13625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS13645 PF07690 Major Facilitator Superfamily PP4_RS13650 PF12697 Alpha/beta hydrolase family PP4_RS13655 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS13655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS13660 PF07044 Protein of unknown function (DUF1329) PP4_RS13665 PF13193 AMP-binding enzyme C-terminal domain PP4_RS13665 PF00501 AMP-binding enzyme PP4_RS13670 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13675 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13680 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS13680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS13695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13710 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS13715 PF00501 AMP-binding enzyme PP4_RS13715 PF13193 AMP-binding enzyme C-terminal domain PP4_RS13720 PF00175 Oxidoreductase NAD-binding domain PP4_RS13720 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS13720 PF00970 Oxidoreductase FAD-binding domain PP4_RS13725 PF00890 FAD binding domain PP4_RS13730 PF00890 FAD binding domain PP4_RS13735 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS13740 PF01425 Amidase PP4_RS13745 PF00171 Aldehyde dehydrogenase family PP4_RS13750 PF01613 Flavin reductase like domain PP4_RS13760 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS13765 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation PP4_RS13765 PF01118 Semialdehyde dehydrogenase, NAD binding domain PP4_RS13770 PF00682 HMGL-like PP4_RS13770 PF07836 DmpG-like communication domain PP4_RS13775 PF07690 Major Facilitator Superfamily PP4_RS13780 PF01012 Electron transfer flavoprotein domain PP4_RS13785 PF00766 Electron transfer flavoprotein FAD-binding domain PP4_RS13785 PF01012 Electron transfer flavoprotein domain PP4_RS13790 PF00005 ABC transporter PP4_RS13795 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS13800 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS13805 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS13815 PF00202 Aminotransferase class-III PP4_RS13825 PF01258 Prokaryotic dksA/traR C4-type zinc finger PP4_RS13830 PF01197 Ribosomal protein L31 PP4_RS13840 PF07690 Major Facilitator Superfamily PP4_RS13845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS13845 PF03466 LysR substrate binding domain PP4_RS13850 PF02223 Thymidylate kinase PP4_RS13855 PF03576 Peptidase family S58 PP4_RS13865 PF00072 Response regulator receiver domain PP4_RS13865 PF00196 Bacterial regulatory proteins, luxR family PP4_RS13870 PF00360 Phytochrome region PP4_RS13870 PF08446 PAS fold PP4_RS13870 PF01590 GAF domain PP4_RS13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS13870 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS13875 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS13875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS13875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS13880 PF03466 LysR substrate binding domain PP4_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS13895 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS13900 PF00005 ABC transporter PP4_RS13905 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS13910 PF01266 FAD dependent oxidoreductase PP4_RS13915 PF01037 Lrp/AsnC ligand binding domain PP4_RS13920 PF07690 Major Facilitator Superfamily PP4_RS13930 PF00248 Aldo/keto reductase family PP4_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS13935 PF16527 Two-component sensor protein CpxA, periplasmic domain PP4_RS13935 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS13935 PF00672 HAMP domain PP4_RS13940 PF00486 Transcriptional regulatory protein, C terminal PP4_RS13940 PF00072 Response regulator receiver domain PP4_RS13945 PF01103 Surface antigen PP4_RS13945 PF07244 Surface antigen variable number repeat PP4_RS13955 PF04231 Endonuclease I PP4_RS13960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS13960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS13965 PF07690 Major Facilitator Superfamily PP4_RS13970 PF00294 pfkB family carbohydrate kinase PP4_RS13980 PF00356 Bacterial regulatory proteins, lacI family PP4_RS13985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS13985 PF00034 Cytochrome c PP4_RS13990 PF00732 GMC oxidoreductase PP4_RS13990 PF05199 GMC oxidoreductase PP4_RS13995 PF13618 Gluconate 2-dehydrogenase subunit 3 PP4_RS14015 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PP4_RS14015 PF04717 Type VI secretion system, phage-baseplate injector PP4_RS14015 PF13296 Putative type VI secretion system Rhs element Vgr PP4_RS14060 PF13532 2OG-Fe(II) oxygenase superfamily PP4_RS14085 PF05726 Pirin C-terminal cupin domain PP4_RS14085 PF02678 Pirin PP4_RS14110 PF09084 NMT1/THI5 like PP4_RS14115 PF00248 Aldo/keto reductase family PP4_RS14120 PF00296 Luciferase-like monooxygenase PP4_RS14125 PF07715 TonB-dependent Receptor Plug Domain PP4_RS14125 PF00593 TonB dependent receptor PP4_RS14130 PF00356 Bacterial regulatory proteins, lacI family PP4_RS14135 PF03466 LysR substrate binding domain PP4_RS14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS14140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS14140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS14140 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS14145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS14150 PF00596 Class II Aldolase and Adducin N-terminal domain PP4_RS14155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS14160 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS14165 PF12911 N-terminal TM domain of oligopeptide transport permease C PP4_RS14165 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS14170 PF00005 ABC transporter PP4_RS14170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PP4_RS14180 PF00296 Luciferase-like monooxygenase PP4_RS14185 PF00296 Luciferase-like monooxygenase PP4_RS14190 PF00593 TonB dependent receptor PP4_RS14190 PF07715 TonB-dependent Receptor Plug Domain PP4_RS14210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS14215 PF06906 Protein of unknown function (DUF1272) PP4_RS14220 PF00072 Response regulator receiver domain PP4_RS14220 PF00196 Bacterial regulatory proteins, luxR family PP4_RS14225 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS14225 PF00989 PAS fold PP4_RS14225 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14225 PF00072 Response regulator receiver domain PP4_RS14225 PF01627 Hpt domain PP4_RS14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS14230 PF08447 PAS fold PP4_RS14230 PF13426 PAS domain PP4_RS14235 PF00356 Bacterial regulatory proteins, lacI family PP4_RS14245 PF02447 GntP family permease PP4_RS14255 PF02954 Bacterial regulatory protein, Fis family PP4_RS14255 PF00158 Sigma-54 interaction domain PP4_RS14255 PF00072 Response regulator receiver domain PP4_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14265 PF13188 PAS domain PP4_RS14265 PF00989 PAS fold PP4_RS14265 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14265 PF13426 PAS domain PP4_RS14270 PF10145 Phage-related minor tail protein PP4_RS14270 PF01464 Transglycosylase SLT domain PP4_RS14270 PF01551 Peptidase family M23 PP4_RS14275 PF08334 Type II secretion system (T2SS), protein G PP4_RS14275 PF07963 Prokaryotic N-terminal methylation motif PP4_RS14280 PF00482 Type II secretion system (T2SS), protein F PP4_RS14285 PF00296 Luciferase-like monooxygenase PP4_RS14295 PF05995 Cysteine dioxygenase type I PP4_RS14305 PF08281 Sigma-70, region 4 PP4_RS14305 PF04542 Sigma-70 region 2 PP4_RS14310 PF04773 FecR protein PP4_RS14310 PF16220 Domain of unknown function (DUF4880) PP4_RS14315 PF07715 TonB-dependent Receptor Plug Domain PP4_RS14315 PF00593 TonB dependent receptor PP4_RS14320 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS14320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS14325 PF00873 AcrB/AcrD/AcrF family PP4_RS14330 PF02321 Outer membrane efflux protein PP4_RS14340 PF08448 PAS fold PP4_RS14340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14340 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS14340 PF13188 PAS domain PP4_RS14340 PF00072 Response regulator receiver domain PP4_RS14345 PF00072 Response regulator receiver domain PP4_RS14345 PF13426 PAS domain PP4_RS14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS14365 PF12792 CSS motif domain associated with EAL PP4_RS14365 PF00563 EAL domain PP4_RS14375 PF00571 CBS domain PP4_RS14375 PF03471 Transporter associated domain PP4_RS14375 PF03741 Integral membrane protein TerC family PP4_RS14380 PF01810 LysE type translocator PP4_RS14400 PF00171 Aldehyde dehydrogenase family PP4_RS14440 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS14440 PF14602 Hexapeptide repeat of succinyl-transferase PP4_RS14440 PF12804 MobA-like NTP transferase domain PP4_RS14470 PF13438 Domain of unknown function (DUF4113) PP4_RS14470 PF00817 impB/mucB/samB family PP4_RS14470 PF11799 impB/mucB/samB family C-terminal domain PP4_RS14475 PF00717 Peptidase S24-like PP4_RS14490 PF12848 ABC transporter PP4_RS14490 PF00005 ABC transporter PP4_RS14495 PF07690 Major Facilitator Superfamily PP4_RS14505 PF02798 Glutathione S-transferase, N-terminal domain PP4_RS14510 PF01425 Amidase PP4_RS14520 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS14525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PP4_RS14530 PF16653 Saccharopine dehydrogenase C-terminal domain PP4_RS14530 PF03435 Saccharopine dehydrogenase NADP binding domain PP4_RS14540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PP4_RS14540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PP4_RS14540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PP4_RS14545 PF01370 NAD dependent epimerase/dehydratase family PP4_RS14550 PF00535 Glycosyl transferase family 2 PP4_RS14560 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PP4_RS14565 PF06039 Malate:quinone oxidoreductase (Mqo) PP4_RS14600 PF13296 Putative type VI secretion system Rhs element Vgr PP4_RS14600 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PP4_RS14600 PF04717 Type VI secretion system, phage-baseplate injector PP4_RS14610 PF02626 Carboxyltransferase domain, subdomain A and B PP4_RS14620 PF03746 LamB/YcsF family PP4_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS14625 PF03466 LysR substrate binding domain PP4_RS14635 PF00677 Lumazine binding domain PP4_RS14640 PF06912 Protein of unknown function (DUF1275) PP4_RS14645 PF08946 Osmosensory transporter coiled coil PP4_RS14645 PF00083 Sugar (and other) transporter PP4_RS14650 PF00490 Delta-aminolevulinic acid dehydratase PP4_RS14660 PF00324 Amino acid permease PP4_RS14665 PF01266 FAD dependent oxidoreductase PP4_RS14670 PF08943 CsiD PP4_RS14675 PF00392 Bacterial regulatory proteins, gntR family PP4_RS14675 PF07729 FCD domain PP4_RS14680 PF00486 Transcriptional regulatory protein, C terminal PP4_RS14680 PF00072 Response regulator receiver domain PP4_RS14685 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS14685 PF00672 HAMP domain PP4_RS14690 PF09190 DALR domain PP4_RS14690 PF01406 tRNA synthetases class I (C) catalytic domain PP4_RS14695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PP4_RS14695 PF00749 tRNA synthetases class I (E and Q), catalytic domain PP4_RS14700 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PP4_RS14705 PF00149 Calcineurin-like phosphoesterase PP4_RS14710 PF01804 Penicillin amidase PP4_RS14745 PF04357 TamB, inner membrane protein subunit of TAM complex PP4_RS14750 PF07244 Surface antigen variable number repeat PP4_RS14750 PF01103 Surface antigen PP4_RS14750 PF17243 POTRA domain TamA domain 1 PP4_RS14760 PF03372 Endonuclease/Exonuclease/phosphatase family PP4_RS14770 PF04542 Sigma-70 region 2 PP4_RS14770 PF08281 Sigma-70, region 4 PP4_RS14780 PF01292 Prokaryotic cytochrome b561 PP4_RS14785 PF07690 Major Facilitator Superfamily PP4_RS14790 PF07883 Cupin domain PP4_RS14790 PF01381 Helix-turn-helix PP4_RS14800 PF01323 DSBA-like thioredoxin domain PP4_RS14805 PF00106 short chain dehydrogenase PP4_RS14820 PF13593 SBF-like CPA transporter family (DUF4137) PP4_RS14825 PF00144 Beta-lactamase PP4_RS14845 PF01906 Putative heavy-metal-binding PP4_RS14850 PF00892 EamA-like transporter family PP4_RS14855 PF00596 Class II Aldolase and Adducin N-terminal domain PP4_RS14865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS14865 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS14875 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS14880 PF02525 Flavodoxin-like fold PP4_RS14885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS14885 PF03466 LysR substrate binding domain PP4_RS14900 PF02673 Bacitracin resistance protein BacA PP4_RS14905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS14905 PF00672 HAMP domain PP4_RS14905 PF17200 Single Cache domain 2 PP4_RS14960 PF02492 CobW/HypB/UreG, nucleotide-binding domain PP4_RS14965 PF01730 UreF PP4_RS14975 PF02814 UreE urease accessory protein, N-terminal domain PP4_RS14975 PF05194 UreE urease accessory protein, C-terminal domain PP4_RS14980 PF01979 Amidohydrolase family PP4_RS14980 PF00449 Urease alpha-subunit, N-terminal domain PP4_RS14985 PF00699 Urease beta subunit PP4_RS14990 PF00547 Urease, gamma subunit PP4_RS14995 PF01774 UreD urease accessory protein PP4_RS15000 PF02899 Phage integrase, N-terminal SAM-like domain PP4_RS15000 PF00589 Phage integrase family PP4_RS15005 PF04851 Type III restriction enzyme, res subunit PP4_RS15005 PF13307 Helicase C-terminal domain PP4_RS15005 PF00929 Exonuclease PP4_RS15010 PF18081 Fanconi anemia-associated nuclease SAP domain PP4_RS15010 PF08774 VRR-NUC domain PP4_RS15015 PF07690 Major Facilitator Superfamily PP4_RS15030 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PP4_RS15030 PF08666 SAF domain PP4_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15035 PF03466 LysR substrate binding domain PP4_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15040 PF03466 LysR substrate binding domain PP4_RS15045 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PP4_RS15045 PF13378 Enolase C-terminal domain-like PP4_RS15050 PF07690 Major Facilitator Superfamily PP4_RS15055 PF00155 Aminotransferase class I and II PP4_RS15055 PF00392 Bacterial regulatory proteins, gntR family PP4_RS15065 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS15065 PF16197 Ketoacyl-synthetase C-terminal extension PP4_RS15065 PF00109 Beta-ketoacyl synthase, N-terminal domain PP4_RS15065 PF02801 Beta-ketoacyl synthase, C-terminal domain PP4_RS15065 PF08659 KR domain PP4_RS15065 PF14765 Polyketide synthase dehydratase PP4_RS15065 PF00698 Acyl transferase domain PP4_RS15065 PF00550 Phosphopantetheine attachment site PP4_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15070 PF03466 LysR substrate binding domain PP4_RS15080 PF02463 RecF/RecN/SMC N terminal domain PP4_RS15155 PF12344 Ultra-violet resistance protein B PP4_RS15155 PF17757 UvrB interaction domain PP4_RS15155 PF02151 UvrB/uvrC motif PP4_RS15155 PF04851 Type III restriction enzyme, res subunit PP4_RS15155 PF00271 Helicase conserved C-terminal domain PP4_RS15165 PF02525 Flavodoxin-like fold PP4_RS15170 PF13411 MerR HTH family regulatory protein PP4_RS15185 PF03466 LysR substrate binding domain PP4_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15195 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system PP4_RS15205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS15205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS15205 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS15210 PF12697 Alpha/beta hydrolase family PP4_RS15215 PF00672 HAMP domain PP4_RS15215 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS15215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15235 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS15235 PF01799 [2Fe-2S] binding domain PP4_RS15240 PF03450 CO dehydrogenase flavoprotein C-terminal domain PP4_RS15240 PF00941 FAD binding domain in molybdopterin dehydrogenase PP4_RS15245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PP4_RS15245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS15250 PF00107 Zinc-binding dehydrogenase PP4_RS15250 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS15250 PF13823 Alcohol dehydrogenase GroES-associated PP4_RS15255 PF01965 DJ-1/PfpI family PP4_RS15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15290 PF13426 PAS domain PP4_RS15290 PF00072 Response regulator receiver domain PP4_RS15295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS15295 PF00072 Response regulator receiver domain PP4_RS15295 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS15295 PF01627 Hpt domain PP4_RS15295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15295 PF00672 HAMP domain PP4_RS15305 PF13581 Histidine kinase-like ATPase domain PP4_RS15310 PF01740 STAS domain PP4_RS15315 PF08678 Rsbr N terminal PP4_RS15315 PF01740 STAS domain PP4_RS15325 PF03372 Endonuclease/Exonuclease/phosphatase family PP4_RS15330 PF13091 PLD-like domain PP4_RS15335 PF03706 Lysylphosphatidylglycerol synthase TM region PP4_RS15350 PF02472 Biopolymer transport protein ExbD/TolR PP4_RS15355 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS15360 PF02333 Phytase PP4_RS15375 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS15380 PF12833 Helix-turn-helix domain PP4_RS15380 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PP4_RS15390 PF08281 Sigma-70, region 4 PP4_RS15390 PF04542 Sigma-70 region 2 PP4_RS15400 PF05114 Protein of unknown function (DUF692) PP4_RS15415 PF01068 ATP dependent DNA ligase domain PP4_RS15415 PF13298 DNA polymerase Ligase (LigD) PP4_RS15415 PF04679 ATP dependent DNA ligase C terminal region PP4_RS15425 PF02585 GlcNAc-PI de-N-acetylase PP4_RS15440 PF02735 Ku70/Ku80 beta-barrel domain PP4_RS15445 PF12833 Helix-turn-helix domain PP4_RS15445 PF01965 DJ-1/PfpI family PP4_RS15450 PF00106 short chain dehydrogenase PP4_RS15455 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS15455 PF00107 Zinc-binding dehydrogenase PP4_RS15460 PF03466 LysR substrate binding domain PP4_RS15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15465 PF08267 Cobalamin-independent synthase, N-terminal domain PP4_RS15465 PF01717 Cobalamin-independent synthase, Catalytic domain PP4_RS15475 PF05552 Conserved TM helix PP4_RS15475 PF00924 Mechanosensitive ion channel PP4_RS15485 PF01022 Bacterial regulatory protein, arsR family PP4_RS15490 PF01451 Low molecular weight phosphotyrosine protein phosphatase PP4_RS15495 PF03358 NADPH-dependent FMN reductase PP4_RS15505 PF04352 ProQ/FINO family PP4_RS15505 PF17516 ProQ C-terminal domain PP4_RS15515 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS15545 PF01011 PQQ enzyme repeat PP4_RS15545 PF13360 PQQ-like domain PP4_RS15560 PF03466 LysR substrate binding domain PP4_RS15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15565 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS15570 PF06826 Predicted Permease Membrane Region PP4_RS15580 PF00884 Sulfatase PP4_RS15595 PF07584 Aerotolerance regulator N-terminal PP4_RS15595 PF13519 von Willebrand factor type A domain PP4_RS15615 PF07726 ATPase family associated with various cellular activities (AAA) PP4_RS15615 PF17863 AAA lid domain PP4_RS15630 PF11769 Protein of unknown function (DUF3313) PP4_RS15645 PF04403 Paraquat-inducible protein A PP4_RS15650 PF02470 MlaD protein PP4_RS15660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PP4_RS15665 PF01464 Transglycosylase SLT domain PP4_RS15710 PF01546 Peptidase family M20/M25/M40 PP4_RS15710 PF07687 Peptidase dimerisation domain PP4_RS15715 PF07690 Major Facilitator Superfamily PP4_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15725 PF03466 LysR substrate binding domain PP4_RS15730 PF08534 Redoxin PP4_RS15735 PF04055 Radical SAM superfamily PP4_RS15735 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PP4_RS15740 PF00464 Serine hydroxymethyltransferase PP4_RS15745 PF02347 Glycine cleavage system P-protein PP4_RS15750 PF01597 Glycine cleavage H-protein PP4_RS15755 PF00158 Sigma-54 interaction domain PP4_RS15755 PF18024 Helix-turn-helix domain PP4_RS15765 PF00732 GMC oxidoreductase PP4_RS15765 PF05199 GMC oxidoreductase PP4_RS15780 PF00171 Aldehyde dehydrogenase family PP4_RS15785 PF00491 Arginase family PP4_RS15795 PF03466 LysR substrate binding domain PP4_RS15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15805 PF00171 Aldehyde dehydrogenase family PP4_RS15815 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS15830 PF01042 Endoribonuclease L-PSP PP4_RS15835 PF14403 Circularly permuted ATP-grasp type 2 PP4_RS15840 PF14403 Circularly permuted ATP-grasp type 2 PP4_RS15840 PF04168 A predicted alpha-helical domain with a conserved ER motif. PP4_RS15845 PF01841 Transglutaminase-like superfamily PP4_RS15845 PF08379 Bacterial transglutaminase-like N-terminal region PP4_RS15855 PF07690 Major Facilitator Superfamily PP4_RS15860 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS15865 PF03466 LysR substrate binding domain PP4_RS15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS15880 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS15880 PF00672 HAMP domain PP4_RS15880 PF01627 Hpt domain PP4_RS15880 PF00072 Response regulator receiver domain PP4_RS15885 PF00465 Iron-containing alcohol dehydrogenase PP4_RS15890 PF00171 Aldehyde dehydrogenase family PP4_RS15895 PF13360 PQQ-like domain PP4_RS15895 PF01011 PQQ enzyme repeat PP4_RS15900 PF16123 Hydroxyacylglutathione hydrolase C-terminus PP4_RS15900 PF00753 Metallo-beta-lactamase superfamily PP4_RS15915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS15920 PF13360 PQQ-like domain PP4_RS15920 PF01011 PQQ enzyme repeat PP4_RS15930 PF00072 Response regulator receiver domain PP4_RS15930 PF00196 Bacterial regulatory proteins, luxR family PP4_RS15935 PF07730 Histidine kinase PP4_RS15935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15935 PF05231 MASE1 PP4_RS15950 PF00005 ABC transporter PP4_RS15965 PF00072 Response regulator receiver domain PP4_RS15965 PF00196 Bacterial regulatory proteins, luxR family PP4_RS15970 PF00072 Response regulator receiver domain PP4_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS15970 PF09456 RcsC Alpha-Beta-Loop (ABL) PP4_RS15970 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS15995 PF00005 ABC transporter PP4_RS16000 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16010 PF12849 PBP superfamily domain PP4_RS16045 PF07690 Major Facilitator Superfamily PP4_RS16050 PF00465 Iron-containing alcohol dehydrogenase PP4_RS16055 PF03466 LysR substrate binding domain PP4_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16065 PF17938 Tetracyclin repressor-like, C-terminal domain PP4_RS16065 PF00440 Bacterial regulatory proteins, tetR family PP4_RS16070 PF07690 Major Facilitator Superfamily PP4_RS16080 PF00690 Cation transporter/ATPase, N-terminus PP4_RS16080 PF00689 Cation transporting ATPase, C-terminus PP4_RS16085 PF00672 HAMP domain PP4_RS16085 PF12729 Four helix bundle sensory module for signal transduction PP4_RS16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS16090 PF12697 Alpha/beta hydrolase family PP4_RS16100 PF00155 Aminotransferase class I and II PP4_RS16100 PF00392 Bacterial regulatory proteins, gntR family PP4_RS16105 PF00175 Oxidoreductase NAD-binding domain PP4_RS16105 PF00970 Oxidoreductase FAD-binding domain PP4_RS16105 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS16115 PF07660 Secretin and TonB N terminus short domain PP4_RS16115 PF00593 TonB dependent receptor PP4_RS16115 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16125 PF04542 Sigma-70 region 2 PP4_RS16125 PF08281 Sigma-70, region 4 PP4_RS16140 PF00501 AMP-binding enzyme PP4_RS16140 PF13193 AMP-binding enzyme C-terminal domain PP4_RS16145 PF13520 Amino acid permease PP4_RS16170 PF00072 Response regulator receiver domain PP4_RS16170 PF00196 Bacterial regulatory proteins, luxR family PP4_RS16175 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS16175 PF00072 Response regulator receiver domain PP4_RS16175 PF13426 PAS domain PP4_RS16175 PF08448 PAS fold PP4_RS16185 PF00701 Dihydrodipicolinate synthetase family PP4_RS16195 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) PP4_RS16200 PF01270 Glycosyl hydrolases family 8 PP4_RS16205 PF03170 Bacterial cellulose synthase subunit PP4_RS16210 PF03552 Cellulose synthase PP4_RS16210 PF00535 Glycosyl transferase family 2 PP4_RS16210 PF07238 PilZ domain PP4_RS16215 PF06564 Cellulose biosynthesis protein BcsQ PP4_RS16225 PF11658 Cellulose biosynthesis protein BcsG PP4_RS16235 PF10995 Cellulose biosynthesis GIL PP4_RS16240 PF00005 ABC transporter PP4_RS16240 PF00664 ABC transporter transmembrane region PP4_RS16245 PF01614 Bacterial transcriptional regulator PP4_RS16245 PF09339 IclR helix-turn-helix domain PP4_RS16250 PF00005 ABC transporter PP4_RS16250 PF08402 TOBE domain PP4_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16260 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16265 PF17806 Sarcosine oxidase A3 domain PP4_RS16265 PF01571 Aminomethyltransferase folate-binding domain PP4_RS16265 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS16265 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS16275 PF01266 FAD dependent oxidoreductase PP4_RS16285 PF01614 Bacterial transcriptional regulator PP4_RS16285 PF09339 IclR helix-turn-helix domain PP4_RS16290 PF01488 Shikimate / quinate 5-dehydrogenase PP4_RS16290 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PP4_RS16290 PF08501 Shikimate dehydrogenase substrate binding domain PP4_RS16295 PF00890 FAD binding domain PP4_RS16305 PF00890 FAD binding domain PP4_RS16310 PF06744 Type VI secretion protein IcmF C-terminal PP4_RS16310 PF14331 ImcF-related N-terminal domain PP4_RS16310 PF06761 Intracellular multiplication and human macrophage-killing PP4_RS16345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PP4_RS16345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PP4_RS16355 PF00890 FAD binding domain PP4_RS16360 PF01966 HD domain PP4_RS16365 PF00171 Aldehyde dehydrogenase family PP4_RS16370 PF00202 Aminotransferase class-III PP4_RS16375 PF00072 Response regulator receiver domain PP4_RS16375 PF00196 Bacterial regulatory proteins, luxR family PP4_RS16380 PF00324 Amino acid permease PP4_RS16385 PF00171 Aldehyde dehydrogenase family PP4_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16390 PF03466 LysR substrate binding domain PP4_RS16400 PF00005 ABC transporter PP4_RS16405 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16410 PF00465 Iron-containing alcohol dehydrogenase PP4_RS16420 PF03466 LysR substrate binding domain PP4_RS16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16430 PF03466 LysR substrate binding domain PP4_RS16430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16435 PF07690 Major Facilitator Superfamily PP4_RS16440 PF01979 Amidohydrolase family PP4_RS16445 PF00860 Permease family PP4_RS16450 PF00106 short chain dehydrogenase PP4_RS16455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16460 PF07690 Major Facilitator Superfamily PP4_RS16465 PF01220 Dehydroquinase class II PP4_RS16470 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PP4_RS16470 PF01488 Shikimate / quinate 5-dehydrogenase PP4_RS16470 PF08501 Shikimate dehydrogenase substrate binding domain PP4_RS16475 PF02515 CoA-transferase family III PP4_RS16480 PF01575 MaoC like domain PP4_RS16490 PF08546 Ketopantoate reductase PanE/ApbA C terminal PP4_RS16490 PF02558 Ketopantoate reductase PanE/ApbA PP4_RS16495 PF03466 LysR substrate binding domain PP4_RS16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16505 PF01126 Heme oxygenase PP4_RS16515 PF00884 Sulfatase PP4_RS16520 PF00440 Bacterial regulatory proteins, tetR family PP4_RS16525 PF07690 Major Facilitator Superfamily PP4_RS16540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS16550 PF07690 Major Facilitator Superfamily PP4_RS16550 PF00083 Sugar (and other) transporter PP4_RS16555 PF00561 alpha/beta hydrolase fold PP4_RS16560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS16565 PF00561 alpha/beta hydrolase fold PP4_RS16575 PF13361 UvrD-like helicase C-terminal domain PP4_RS16575 PF12462 DNA helicase IV / RNA helicase N terminal PP4_RS16575 PF00580 UvrD/REP helicase N-terminal domain PP4_RS16580 PF17954 Quercetinase C-terminal cupin domain PP4_RS16580 PF02678 Pirin PP4_RS16585 PF00550 Phosphopantetheine attachment site PP4_RS16585 PF00668 Condensation domain PP4_RS16585 PF00501 AMP-binding enzyme PP4_RS16585 PF13193 AMP-binding enzyme C-terminal domain PP4_RS16585 PF00975 Thioesterase domain PP4_RS16590 PF08281 Sigma-70, region 4 PP4_RS16590 PF04542 Sigma-70 region 2 PP4_RS16595 PF16220 Domain of unknown function (DUF4880) PP4_RS16595 PF04773 FecR protein PP4_RS16600 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16600 PF07660 Secretin and TonB N terminus short domain PP4_RS16600 PF00593 TonB dependent receptor PP4_RS16615 PF00593 TonB dependent receptor PP4_RS16615 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16625 PF08281 Sigma-70, region 4 PP4_RS16625 PF04542 Sigma-70 region 2 PP4_RS16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16630 PF03466 LysR substrate binding domain PP4_RS16635 PF00375 Sodium:dicarboxylate symporter family PP4_RS16640 PF05681 Fumarate hydratase (Fumerase) PP4_RS16645 PF05683 Fumarase C-terminus PP4_RS16650 PF00158 Sigma-54 interaction domain PP4_RS16665 PF00296 Luciferase-like monooxygenase PP4_RS16670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS16680 PF00296 Luciferase-like monooxygenase PP4_RS16685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PP4_RS16685 PF00005 ABC transporter PP4_RS16690 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16690 PF12911 N-terminal TM domain of oligopeptide transport permease C PP4_RS16695 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS16705 PF00296 Luciferase-like monooxygenase PP4_RS16720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS16720 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS16720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS16725 PF00664 ABC transporter transmembrane region PP4_RS16725 PF00005 ABC transporter PP4_RS16730 PF00005 ABC transporter PP4_RS16730 PF00664 ABC transporter transmembrane region PP4_RS16735 PF00296 Luciferase-like monooxygenase PP4_RS16750 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16750 PF00593 TonB dependent receptor PP4_RS16755 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16755 PF00593 TonB dependent receptor PP4_RS16760 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16765 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS16770 PF00005 ABC transporter PP4_RS16790 PF00563 EAL domain PP4_RS16790 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS16790 PF03707 Bacterial signalling protein N terminal repeat PP4_RS16795 PF08003 Protein of unknown function (DUF1698) PP4_RS16800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PP4_RS16800 PF01261 Xylose isomerase-like TIM barrel PP4_RS16805 PF07690 Major Facilitator Superfamily PP4_RS16805 PF00083 Sugar (and other) transporter PP4_RS16810 PF00282 Pyridoxal-dependent decarboxylase conserved domain PP4_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16815 PF03466 LysR substrate binding domain PP4_RS16820 PF01709 Transcriptional regulator PP4_RS16825 PF01266 FAD dependent oxidoreductase PP4_RS16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16835 PF03466 LysR substrate binding domain PP4_RS16850 PF07660 Secretin and TonB N terminus short domain PP4_RS16850 PF00593 TonB dependent receptor PP4_RS16850 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16870 PF00324 Amino acid permease PP4_RS16875 PF00155 Aminotransferase class I and II PP4_RS16880 PF01546 Peptidase family M20/M25/M40 PP4_RS16880 PF07687 Peptidase dimerisation domain PP4_RS16885 PF00083 Sugar (and other) transporter PP4_RS16885 PF07690 Major Facilitator Superfamily PP4_RS16890 PF03466 LysR substrate binding domain PP4_RS16890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16905 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PP4_RS16915 PF00106 short chain dehydrogenase PP4_RS16930 PF00881 Nitroreductase family PP4_RS16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS16935 PF03466 LysR substrate binding domain PP4_RS16940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PP4_RS16940 PF12833 Helix-turn-helix domain PP4_RS16950 PF07690 Major Facilitator Superfamily PP4_RS16960 PF00107 Zinc-binding dehydrogenase PP4_RS16960 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS16965 PF12833 Helix-turn-helix domain PP4_RS16965 PF06719 AraC-type transcriptional regulator N-terminus PP4_RS16975 PF02525 Flavodoxin-like fold PP4_RS16990 PF07660 Secretin and TonB N terminus short domain PP4_RS16990 PF07715 TonB-dependent Receptor Plug Domain PP4_RS16990 PF00593 TonB dependent receptor PP4_RS17005 PF02627 Carboxymuconolactone decarboxylase family PP4_RS17020 PF07715 TonB-dependent Receptor Plug Domain PP4_RS17020 PF00593 TonB dependent receptor PP4_RS17035 PF01032 FecCD transport family PP4_RS17040 PF00005 ABC transporter PP4_RS17045 PF00127 Copper binding proteins, plastocyanin/azurin family PP4_RS17050 PF03573 outer membrane porin, OprD family PP4_RS17070 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS17075 PF13614 AAA domain PP4_RS17085 PF07715 TonB-dependent Receptor Plug Domain PP4_RS17085 PF00593 TonB dependent receptor PP4_RS17095 PF08946 Osmosensory transporter coiled coil PP4_RS17095 PF00083 Sugar (and other) transporter PP4_RS17100 PF00873 AcrB/AcrD/AcrF family PP4_RS17105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS17105 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS17110 PF02321 Outer membrane efflux protein PP4_RS17115 PF01220 Dehydroquinase class II PP4_RS17120 PF08501 Shikimate dehydrogenase substrate binding domain PP4_RS17120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PP4_RS17125 PF17991 Thioredoxin like C-terminal domain PP4_RS17125 PF00578 AhpC/TSA family PP4_RS17125 PF02683 Cytochrome C biogenesis protein transmembrane region PP4_RS17140 PF00486 Transcriptional regulatory protein, C terminal PP4_RS17140 PF00072 Response regulator receiver domain PP4_RS17145 PF00672 HAMP domain PP4_RS17145 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS17150 PF07681 DoxX PP4_RS17160 PF05114 Protein of unknown function (DUF692) PP4_RS17185 PF00136 DNA polymerase family B PP4_RS17185 PF03104 DNA polymerase family B, exonuclease domain PP4_RS17190 PF07690 Major Facilitator Superfamily PP4_RS17195 PF03466 LysR substrate binding domain PP4_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS17200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS17200 PF03466 LysR substrate binding domain PP4_RS17235 PF12833 Helix-turn-helix domain PP4_RS17255 PF02630 SCO1/SenC PP4_RS17260 PF01106 NifU-like domain PP4_RS17260 PF01521 Iron-sulphur cluster biosynthesis PP4_RS17265 PF01757 Acyltransferase family PP4_RS17275 PF02310 B12 binding domain PP4_RS17275 PF00809 Pterin binding enzyme PP4_RS17275 PF02607 B12 binding domain PP4_RS17275 PF02574 Homocysteine S-methyltransferase PP4_RS17275 PF02965 Vitamin B12 dependent methionine synthase, activation domain PP4_RS17290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PP4_RS17290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PP4_RS17305 PF00248 Aldo/keto reductase family PP4_RS17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS17315 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS17315 PF00672 HAMP domain PP4_RS17320 PF00486 Transcriptional regulatory protein, C terminal PP4_RS17320 PF00072 Response regulator receiver domain PP4_RS17325 PF04333 MlaA lipoprotein PP4_RS17335 PF09084 NMT1/THI5 like PP4_RS17340 PF09084 NMT1/THI5 like PP4_RS17345 PF13350 Tyrosine phosphatase family PP4_RS17355 PF00246 Zinc carboxypeptidase PP4_RS17355 PF18027 Cytosolic carboxypeptidase N-terminal domain PP4_RS17395 PF00360 Phytochrome region PP4_RS17395 PF08446 PAS fold PP4_RS17395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS17395 PF01590 GAF domain PP4_RS17395 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS17400 PF00486 Transcriptional regulatory protein, C terminal PP4_RS17400 PF00072 Response regulator receiver domain PP4_RS17405 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS17405 PF13188 PAS domain PP4_RS17405 PF00072 Response regulator receiver domain PP4_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS17405 PF08448 PAS fold PP4_RS17420 PF03969 AFG1-like ATPase PP4_RS17425 PF16177 Acetyl-coenzyme A synthetase N-terminus PP4_RS17425 PF00501 AMP-binding enzyme PP4_RS17425 PF13193 AMP-binding enzyme C-terminal domain PP4_RS17430 PF03466 LysR substrate binding domain PP4_RS17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS17440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS17445 PF00486 Transcriptional regulatory protein, C terminal PP4_RS17445 PF00072 Response regulator receiver domain PP4_RS17465 PF01242 6-pyruvoyl tetrahydropterin synthase PP4_RS17475 PF11791 Aconitate B N-terminal domain PP4_RS17475 PF00330 Aconitase family (aconitate hydratase) PP4_RS17475 PF06434 Aconitate hydratase 2 N-terminus PP4_RS17480 PF03972 MmgE/PrpD family PP4_RS17485 PF04303 PrpF protein PP4_RS17490 PF00694 Aconitase C-terminal domain PP4_RS17490 PF00330 Aconitase family (aconitate hydratase) PP4_RS17495 PF00285 Citrate synthase, C-terminal domain PP4_RS17505 PF07729 FCD domain PP4_RS17505 PF00392 Bacterial regulatory proteins, gntR family PP4_RS17510 PF18030 RimK PreATP-grasp domain PP4_RS17510 PF08443 RimK-like ATP-grasp domain PP4_RS17525 PF04715 Anthranilate synthase component I, N terminal region PP4_RS17525 PF00425 chorismate binding enzyme PP4_RS17530 PF01507 Phosphoadenosine phosphosulfate reductase family PP4_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS17535 PF03466 LysR substrate binding domain PP4_RS17540 PF00582 Universal stress protein family PP4_RS17545 PF08546 Ketopantoate reductase PanE/ApbA C terminal PP4_RS17545 PF02558 Ketopantoate reductase PanE/ApbA PP4_RS17550 PF00793 DAHP synthetase I family PP4_RS17560 PF11839 Alanine-zipper, major outer membrane lipoprotein PP4_RS17565 PF03734 L,D-transpeptidase catalytic domain PP4_RS17565 PF01476 LysM domain PP4_RS17565 PF17969 L,D-transpeptidase C-terminal domain PP4_RS17575 PF13472 GDSL-like Lipase/Acylhydrolase family PP4_RS17580 PF00005 ABC transporter PP4_RS17590 PF01272 Transcription elongation factor, GreA/GreB, C-term PP4_RS17590 PF03449 Transcription elongation factor, N-terminal PP4_RS17600 PF07681 DoxX PP4_RS17605 PF01464 Transglycosylase SLT domain PP4_RS17605 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS17610 PF01026 TatD related DNase PP4_RS17615 PF00672 HAMP domain PP4_RS17615 PF12729 Four helix bundle sensory module for signal transduction PP4_RS17615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS17640 PF01734 Patatin-like phospholipase PP4_RS17645 PF05698 Bacterial trigger factor protein (TF) C-terminus PP4_RS17650 PF00216 Bacterial DNA-binding protein PP4_RS17655 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS17655 PF05362 Lon protease (S16) C-terminal proteolytic domain PP4_RS17655 PF02190 ATP-dependent protease La (LON) substrate-binding domain PP4_RS17660 PF10431 C-terminal, D2-small domain, of ClpB protein PP4_RS17660 PF07724 AAA domain (Cdc48 subfamily) PP4_RS17660 PF06689 ClpX C4-type zinc finger PP4_RS17665 PF00574 Clp protease PP4_RS17670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS17670 PF05698 Bacterial trigger factor protein (TF) C-terminus PP4_RS17670 PF05697 Bacterial trigger factor protein (TF) PP4_RS17680 PF05973 Phage derived protein Gp49-like (DUF891) PP4_RS17710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PP4_RS17710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PP4_RS17725 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS17730 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS17735 PF00005 ABC transporter PP4_RS17735 PF17912 MalK OB fold domain PP4_RS17740 PF00005 ABC transporter PP4_RS17740 PF17912 MalK OB fold domain PP4_RS17745 PF02954 Bacterial regulatory protein, Fis family PP4_RS17745 PF01590 GAF domain PP4_RS17745 PF00158 Sigma-54 interaction domain PP4_RS17750 PF03707 Bacterial signalling protein N terminal repeat PP4_RS17750 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS17750 PF00563 EAL domain PP4_RS17755 PF08447 PAS fold PP4_RS17755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS17760 PF00375 Sodium:dicarboxylate symporter family PP4_RS17765 PF00392 Bacterial regulatory proteins, gntR family PP4_RS17765 PF07729 FCD domain PP4_RS17785 PF03466 LysR substrate binding domain PP4_RS17785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS17790 PF02743 Cache domain PP4_RS17790 PF00672 HAMP domain PP4_RS17790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS17800 PF01042 Endoribonuclease L-PSP PP4_RS17805 PF01266 FAD dependent oxidoreductase PP4_RS17815 PF01925 Sulfite exporter TauE/SafE PP4_RS17840 PF00593 TonB dependent receptor PP4_RS17840 PF07715 TonB-dependent Receptor Plug Domain PP4_RS17845 PF02040 Arsenical pump membrane protein PP4_RS17860 PF05853 beta-keto acid cleavage enzyme PP4_RS17865 PF13193 AMP-binding enzyme C-terminal domain PP4_RS17865 PF00501 AMP-binding enzyme PP4_RS17880 PF07044 Protein of unknown function (DUF1329) PP4_RS17900 PF03601 Conserved hypothetical protein 698 PP4_RS17910 PF07690 Major Facilitator Superfamily PP4_RS17915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PP4_RS17920 PF00107 Zinc-binding dehydrogenase PP4_RS17920 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS17930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS17930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS17930 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS17950 PF17874 MalT-like TPR region PP4_RS17950 PF00196 Bacterial regulatory proteins, luxR family PP4_RS17955 PF12806 Acetyl-CoA dehydrogenase C-terminal like PP4_RS17955 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS17955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS17955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS17960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PP4_RS17960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP4_RS17960 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS17965 PF02803 Thiolase, C-terminal domain PP4_RS17965 PF00108 Thiolase, N-terminal domain PP4_RS17975 PF06506 Propionate catabolism activator PP4_RS17975 PF02954 Bacterial regulatory protein, Fis family PP4_RS17975 PF00158 Sigma-54 interaction domain PP4_RS17980 PF07690 Major Facilitator Superfamily PP4_RS17985 PF00005 ABC transporter PP4_RS17985 PF06472 ABC transporter transmembrane region 2 PP4_RS18015 PF00892 EamA-like transporter family PP4_RS18045 PF00857 Isochorismatase family PP4_RS18050 PF01381 Helix-turn-helix PP4_RS18060 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PP4_RS18060 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PP4_RS18060 PF00361 Proton-conducting membrane transporter PP4_RS18060 PF13244 Domain of unknown function (DUF4040) PP4_RS18065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PP4_RS18070 PF00361 Proton-conducting membrane transporter PP4_RS18080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PP4_RS18085 PF03334 Na+/H+ antiporter subunit PP4_RS18105 PF01258 Prokaryotic dksA/traR C4-type zinc finger PP4_RS18110 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS18115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS18115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS18115 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS18120 PF00108 Thiolase, N-terminal domain PP4_RS18120 PF02803 Thiolase, C-terminal domain PP4_RS18125 PF00106 short chain dehydrogenase PP4_RS18130 PF00501 AMP-binding enzyme PP4_RS18130 PF13193 AMP-binding enzyme C-terminal domain PP4_RS18140 PF12833 Helix-turn-helix domain PP4_RS18140 PF02311 AraC-like ligand binding domain PP4_RS18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS18145 PF03466 LysR substrate binding domain PP4_RS18150 PF00266 Aminotransferase class-V PP4_RS18155 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS18160 PF02548 Ketopantoate hydroxymethyltransferase PP4_RS18165 PF00392 Bacterial regulatory proteins, gntR family PP4_RS18165 PF00155 Aminotransferase class I and II PP4_RS18175 PF01136 Peptidase family U32 PP4_RS18175 PF16325 Peptidase family U32 C-terminal domain PP4_RS18180 PF07732 Multicopper oxidase PP4_RS18180 PF07731 Multicopper oxidase PP4_RS18180 PF00394 Multicopper oxidase PP4_RS18185 PF05275 Copper resistance protein B precursor (CopB) PP4_RS18195 PF09335 SNARE associated Golgi protein PP4_RS18200 PF00561 alpha/beta hydrolase fold PP4_RS18205 PF03969 AFG1-like ATPase PP4_RS18210 PF07995 Glucose / Sorbosone dehydrogenase PP4_RS18220 PF00491 Arginase family PP4_RS18225 PF13416 Bacterial extracellular solute-binding protein PP4_RS18235 PF07715 TonB-dependent Receptor Plug Domain PP4_RS18235 PF00593 TonB dependent receptor PP4_RS18260 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PP4_RS18265 PF00582 Universal stress protein family PP4_RS18275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PP4_RS18275 PF12838 4Fe-4S dicluster domain PP4_RS18275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS18275 PF00384 Molybdopterin oxidoreductase PP4_RS18275 PF01568 Molydopterin dinucleotide binding domain PP4_RS18280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PP4_RS18280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PP4_RS18280 PF10531 SLBB domain PP4_RS18295 PF00296 Luciferase-like monooxygenase PP4_RS18310 PF07660 Secretin and TonB N terminus short domain PP4_RS18310 PF07715 TonB-dependent Receptor Plug Domain PP4_RS18310 PF00593 TonB dependent receptor PP4_RS18320 PF13302 Acetyltransferase (GNAT) domain PP4_RS18325 PF01381 Helix-turn-helix PP4_RS18330 PF00202 Aminotransferase class-III PP4_RS18335 PF07722 Peptidase C26 PP4_RS18340 PF00120 Glutamine synthetase, catalytic domain PP4_RS18345 PF01381 Helix-turn-helix PP4_RS18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS18350 PF03466 LysR substrate binding domain PP4_RS18390 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS18395 PF00850 Histone deacetylase domain PP4_RS18400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PP4_RS18405 PF00732 GMC oxidoreductase PP4_RS18405 PF05199 GMC oxidoreductase PP4_RS18420 PF01545 Cation efflux family PP4_RS18450 PF03466 LysR substrate binding domain PP4_RS18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS18455 PF00484 Carbonic anhydrase PP4_RS18460 PF02560 Cyanate lyase C-terminal domain PP4_RS18470 PF07969 Amidohydrolase family PP4_RS18475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS18475 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS18505 PF03466 LysR substrate binding domain PP4_RS18510 PF02525 Flavodoxin-like fold PP4_RS18520 PF01207 Dihydrouridine synthase (Dus) PP4_RS18525 PF00923 Transaldolase/Fructose-6-phosphate aldolase PP4_RS18540 PF00196 Bacterial regulatory proteins, luxR family PP4_RS18540 PF00072 Response regulator receiver domain PP4_RS18550 PF04333 MlaA lipoprotein PP4_RS18565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PP4_RS18565 PF14489 QueF-like protein PP4_RS18575 PF00072 Response regulator receiver domain PP4_RS18575 PF00486 Transcriptional regulatory protein, C terminal PP4_RS18580 PF00672 HAMP domain PP4_RS18580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS18580 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS18585 PF02687 FtsX-like permease family PP4_RS18585 PF12704 MacB-like periplasmic core domain PP4_RS18590 PF00005 ABC transporter PP4_RS18595 PF02687 FtsX-like permease family PP4_RS18595 PF12704 MacB-like periplasmic core domain PP4_RS18605 PF03009 Glycerophosphoryl diester phosphodiesterase family PP4_RS18610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PP4_RS18610 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS18615 PF02424 ApbE family PP4_RS18620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PP4_RS18620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS18625 PF02559 CarD-like/TRCF domain PP4_RS18625 PF00270 DEAD/DEAH box helicase PP4_RS18625 PF00271 Helicase conserved C-terminal domain PP4_RS18625 PF03461 TRCF domain PP4_RS18625 PF17757 UvrB interaction domain PP4_RS18635 PF12419 SNF2 Helicase protein PP4_RS18635 PF00271 Helicase conserved C-terminal domain PP4_RS18635 PF00176 SNF2 family N-terminal domain PP4_RS18640 PF00933 Glycosyl hydrolase family 3 N terminal domain PP4_RS18650 PF00440 Bacterial regulatory proteins, tetR family PP4_RS18655 PF01726 LexA DNA binding domain PP4_RS18655 PF00717 Peptidase S24-like PP4_RS18660 PF03846 Cell division inhibitor SulA PP4_RS18675 PF01396 Topoisomerase DNA binding C4 zinc finger PP4_RS18675 PF01751 Toprim domain PP4_RS18675 PF08272 Topoisomerase I zinc-ribbon-like PP4_RS18675 PF01131 DNA topoisomerase PP4_RS18685 PF02803 Thiolase, C-terminal domain PP4_RS18685 PF00108 Thiolase, N-terminal domain PP4_RS18690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PP4_RS18690 PF00378 Enoyl-CoA hydratase/isomerase PP4_RS18690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PP4_RS18700 PF00582 Universal stress protein family PP4_RS18705 PF16326 ABC transporter C-terminal domain PP4_RS18705 PF12848 ABC transporter PP4_RS18705 PF00005 ABC transporter PP4_RS18710 PF14718 Soluble lytic murein transglycosylase L domain PP4_RS18710 PF01464 Transglycosylase SLT domain PP4_RS18720 PF00072 Response regulator receiver domain PP4_RS18720 PF01584 CheW-like domain PP4_RS18730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS18730 PF05231 MASE1 PP4_RS18730 PF07730 Histidine kinase PP4_RS18735 PF00072 Response regulator receiver domain PP4_RS18735 PF00196 Bacterial regulatory proteins, luxR family PP4_RS18740 PF00781 Diacylglycerol kinase catalytic domain PP4_RS18750 PF03454 MoeA C-terminal region (domain IV) PP4_RS18750 PF03453 MoeA N-terminal region (domain I and II) PP4_RS18750 PF00994 Probable molybdopterin binding domain PP4_RS18755 PF00994 Probable molybdopterin binding domain PP4_RS18770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS18770 PF00672 HAMP domain PP4_RS18775 PF00664 ABC transporter transmembrane region PP4_RS18775 PF00005 ABC transporter PP4_RS18780 PF11890 Domain of unknown function (DUF3410) PP4_RS18780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS18780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS18785 PF01206 Sulfurtransferase TusA PP4_RS18790 PF01728 FtsJ-like methyltransferase PP4_RS18790 PF18125 RlmM ferredoxin-like domain PP4_RS18795 PF00694 Aconitase C-terminal domain PP4_RS18795 PF00330 Aconitase family (aconitate hydratase) PP4_RS18800 PF08447 PAS fold PP4_RS18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS18805 PF00849 RNA pseudouridylate synthase PP4_RS18805 PF01479 S4 domain PP4_RS18815 PF08291 Peptidase M15 PP4_RS18815 PF01471 Putative peptidoglycan binding domain PP4_RS18825 PF00909 Ammonium Transporter Family PP4_RS18845 PF01966 HD domain PP4_RS18850 PF00196 Bacterial regulatory proteins, luxR family PP4_RS18850 PF00072 Response regulator receiver domain PP4_RS18855 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS18855 PF01627 Hpt domain PP4_RS18855 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS18855 PF00072 Response regulator receiver domain PP4_RS18855 PF00989 PAS fold PP4_RS18860 PF04320 Protein with unknown function (DUF469) PP4_RS18865 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PP4_RS18870 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS18875 PF01170 Putative RNA methylase family UPF0020 PP4_RS18875 PF10672 S-adenosylmethionine-dependent methyltransferase PP4_RS18875 PF02926 THUMP domain PP4_RS18880 PF01180 Dihydroorotate dehydrogenase PP4_RS18885 PF00005 ABC transporter PP4_RS18890 PF03861 ANTAR domain PP4_RS18890 PF08376 Nitrate and nitrite sensing PP4_RS18895 PF07690 Major Facilitator Superfamily PP4_RS18900 PF00069 Protein kinase domain PP4_RS18905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS18910 PF05736 OprF membrane domain PP4_RS18910 PF00691 OmpA family PP4_RS18920 PF05552 Conserved TM helix PP4_RS18920 PF00924 Mechanosensitive ion channel PP4_RS18930 PF01544 CorA-like Mg2+ transporter protein PP4_RS18935 PF03737 Aldolase/RraA PP4_RS18945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PP4_RS18945 PF00391 PEP-utilising enzyme, mobile domain PP4_RS18945 PF02896 PEP-utilising enzyme, TIM barrel domain PP4_RS18950 PF03618 Kinase/pyrophosphorylase PP4_RS18955 PF05088 Bacterial NAD-glutamate dehydrogenase PP4_RS18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS18965 PF03466 LysR substrate binding domain PP4_RS18970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PP4_RS18970 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PP4_RS18975 PF04542 Sigma-70 region 2 PP4_RS18975 PF08281 Sigma-70, region 4 PP4_RS18985 PF07715 TonB-dependent Receptor Plug Domain PP4_RS18985 PF07660 Secretin and TonB N terminus short domain PP4_RS18985 PF00593 TonB dependent receptor PP4_RS19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19005 PF03466 LysR substrate binding domain PP4_RS19020 PF02321 Outer membrane efflux protein PP4_RS19025 PF13533 Biotin-lipoyl like PP4_RS19030 PF07690 Major Facilitator Superfamily PP4_RS19035 PF07702 UTRA domain PP4_RS19035 PF00392 Bacterial regulatory proteins, gntR family PP4_RS19040 PF00873 AcrB/AcrD/AcrF family PP4_RS19050 PF00376 MerR family regulatory protein PP4_RS19050 PF09278 MerR, DNA binding PP4_RS19055 PF05532 CsbD-like PP4_RS19060 PF03573 outer membrane porin, OprD family PP4_RS19065 PF03600 Citrate transporter PP4_RS19070 PF00375 Sodium:dicarboxylate symporter family PP4_RS19075 PF04303 PrpF protein PP4_RS19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19080 PF03466 LysR substrate binding domain PP4_RS19090 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS19095 PF00596 Class II Aldolase and Adducin N-terminal domain PP4_RS19100 PF00701 Dihydrodipicolinate synthetase family PP4_RS19105 PF03594 Benzoate membrane transport protein PP4_RS19120 PF17863 AAA lid domain PP4_RS19120 PF07726 ATPase family associated with various cellular activities (AAA) PP4_RS19125 PF01882 Protein of unknown function DUF58 PP4_RS19150 PF12320 Type 5 capsule protein repressor C-terminal domain PP4_RS19150 PF00149 Calcineurin-like phosphoesterase PP4_RS19165 PF10282 Lactonase, 7-bladed beta-propeller PP4_RS19185 PF11940 Domain of unknown function (DUF3458) Ig-like fold PP4_RS19185 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PP4_RS19185 PF01433 Peptidase family M1 domain PP4_RS19195 PF07023 Protein of unknown function (DUF1315) PP4_RS19205 PF00149 Calcineurin-like phosphoesterase PP4_RS19210 PF01513 ATP-NAD kinase PP4_RS19220 PF01292 Prokaryotic cytochrome b561 PP4_RS19230 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS19230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS19240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PP4_RS19240 PF12833 Helix-turn-helix domain PP4_RS19275 PF01053 Cys/Met metabolism PLP-dependent enzyme PP4_RS19280 PF00156 Phosphoribosyl transferase domain PP4_RS19285 PF02674 Colicin V production protein PP4_RS19295 PF08245 Mur ligase middle domain PP4_RS19295 PF02875 Mur ligase family, glutamate ligase domain PP4_RS19300 PF17848 Acetyl-coA carboxylase zinc finger domain PP4_RS19300 PF01039 Carboxyl transferase domain PP4_RS19305 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PP4_RS19310 PF01416 tRNA pseudouridine synthase PP4_RS19320 PF01118 Semialdehyde dehydrogenase, NAD binding domain PP4_RS19320 PF02774 Semialdehyde dehydrogenase, dimerisation domain PP4_RS19325 PF02774 Semialdehyde dehydrogenase, dimerisation domain PP4_RS19325 PF01118 Semialdehyde dehydrogenase, NAD binding domain PP4_RS19330 PF00180 Isocitrate/isopropylmalate dehydrogenase PP4_RS19335 PF08241 Methyltransferase domain PP4_RS19340 PF00694 Aconitase C-terminal domain PP4_RS19345 PF00330 Aconitase family (aconitate hydratase) PP4_RS19350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19355 PF03707 Bacterial signalling protein N terminal repeat PP4_RS19355 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS19355 PF00563 EAL domain PP4_RS19360 PF00011 Hsp20/alpha crystallin family PP4_RS19365 PF01207 Dihydrouridine synthase (Dus) PP4_RS19375 PF12697 Alpha/beta hydrolase family PP4_RS19415 PF00749 tRNA synthetases class I (E and Q), catalytic domain PP4_RS19420 PF13533 Biotin-lipoyl like PP4_RS19425 PF07690 Major Facilitator Superfamily PP4_RS19430 PF04851 Type III restriction enzyme, res subunit PP4_RS19430 PF00271 Helicase conserved C-terminal domain PP4_RS19430 PF17757 UvrB interaction domain PP4_RS19430 PF12344 Ultra-violet resistance protein B PP4_RS19430 PF02151 UvrB/uvrC motif PP4_RS19435 PF00155 Aminotransferase class I and II PP4_RS19460 PF04055 Radical SAM superfamily PP4_RS19460 PF06463 Molybdenum Cofactor Synthesis C PP4_RS19465 PF00440 Bacterial regulatory proteins, tetR family PP4_RS19470 PF01026 TatD related DNase PP4_RS19475 PF09115 DNA polymerase III, delta subunit, C terminal PP4_RS19480 PF02223 Thymidylate kinase PP4_RS19485 PF02618 YceG-like family PP4_RS19490 PF01063 Amino-transferase class IV PP4_RS19495 PF00109 Beta-ketoacyl synthase, N-terminal domain PP4_RS19495 PF02801 Beta-ketoacyl synthase, C-terminal domain PP4_RS19500 PF00550 Phosphopantetheine attachment site PP4_RS19510 PF00698 Acyl transferase domain PP4_RS19515 PF02504 Fatty acid synthesis protein PP4_RS19520 PF01783 Ribosomal L32p protein family PP4_RS19530 PF02545 Maf-like protein PP4_RS19535 PF06965 Na+/H+ antiporter 1 PP4_RS19535 PF01343 Peptidase family S49 PP4_RS19540 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS19545 PF00849 RNA pseudouridylate synthase PP4_RS19545 PF01479 S4 domain PP4_RS19550 PF12111 Polyribonucleotide phosphorylase C terminal PP4_RS19550 PF10150 Ribonuclease E/G family PP4_RS19550 PF00575 S1 RNA binding domain PP4_RS19555 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PP4_RS19555 PF01565 FAD binding domain PP4_RS19560 PF01451 Low molecular weight phosphotyrosine protein phosphatase PP4_RS19565 PF02348 Cytidylyltransferase PP4_RS19570 PF03966 Trm112p-like protein PP4_RS19575 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PP4_RS19580 PF02472 Biopolymer transport protein ExbD/TolR PP4_RS19585 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS19590 PF03772 Competence protein PP4_RS19590 PF00753 Metallo-beta-lactamase superfamily PP4_RS19595 PF01061 ABC-2 type transporter PP4_RS19600 PF00005 ABC transporter PP4_RS19605 PF13417 Glutathione S-transferase, N-terminal domain PP4_RS19605 PF00043 Glutathione S-transferase, C-terminal domain PP4_RS19610 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS19610 PF09317 Domain of unknown function (DUF1974) PP4_RS19610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS19610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS19640 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PP4_RS19640 PF02753 Pili assembly chaperone PapD, C-terminal domain PP4_RS19650 PF00577 Outer membrane usher protein PP4_RS19650 PF13953 PapC C-terminal domain PP4_RS19650 PF13954 PapC N-terminal domain PP4_RS19655 PF00419 Fimbrial protein PP4_RS19690 PF13185 GAF domain PP4_RS19700 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS19700 PF00672 HAMP domain PP4_RS19700 PF00072 Response regulator receiver domain PP4_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS19700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS19700 PF01627 Hpt domain PP4_RS19705 PF00255 Glutathione peroxidase PP4_RS19710 PF01641 SelR domain PP4_RS19715 PF00155 Aminotransferase class I and II PP4_RS19720 PF01435 Peptidase family M48 PP4_RS19725 PF05724 Thiopurine S-methyltransferase (TPMT) PP4_RS19730 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PP4_RS19735 PF03880 DbpA RNA binding domain PP4_RS19735 PF00271 Helicase conserved C-terminal domain PP4_RS19735 PF00270 DEAD/DEAH box helicase PP4_RS19745 PF01474 Class-II DAHP synthetase family PP4_RS19755 PF03466 LysR substrate binding domain PP4_RS19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19765 PF03466 LysR substrate binding domain PP4_RS19770 PF01047 MarR family PP4_RS19775 PF02566 OsmC-like protein PP4_RS19780 PF01132 Elongation factor P (EF-P) OB domain PP4_RS19780 PF09285 Elongation factor P, C-terminal PP4_RS19780 PF08207 Elongation factor P (EF-P) KOW-like domain PP4_RS19795 PF01272 Transcription elongation factor, GreA/GreB, C-term PP4_RS19795 PF03449 Transcription elongation factor, N-terminal PP4_RS19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS19800 PF03466 LysR substrate binding domain PP4_RS19810 PF07690 Major Facilitator Superfamily PP4_RS19820 PF07715 TonB-dependent Receptor Plug Domain PP4_RS19820 PF00593 TonB dependent receptor PP4_RS19835 PF01553 Acyltransferase PP4_RS19840 PF01544 CorA-like Mg2+ transporter protein PP4_RS19845 PF00117 Glutamine amidotransferase class-I PP4_RS19845 PF00958 GMP synthase C terminal domain PP4_RS19845 PF02540 NAD synthase PP4_RS19865 PF00884 Sulfatase PP4_RS19875 PF02535 ZIP Zinc transporter PP4_RS19885 PF12796 Ankyrin repeats (3 copies) PP4_RS19885 PF00023 Ankyrin repeat PP4_RS19895 PF03079 ARD/ARD' family PP4_RS19900 PF12832 MFS_1 like family PP4_RS19905 PF01264 Chorismate synthase PP4_RS19920 PF05175 Methyltransferase small domain PP4_RS19935 PF01713 Smr domain PP4_RS19940 PF01227 GTP cyclohydrolase I PP4_RS19950 PF02798 Glutathione S-transferase, N-terminal domain PP4_RS19955 PF03594 Benzoate membrane transport protein PP4_RS19960 PF16591 Helical bimodular sensor domain PP4_RS19960 PF00672 HAMP domain PP4_RS19960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS19965 PF00155 Aminotransferase class I and II PP4_RS19970 PF07690 Major Facilitator Superfamily PP4_RS19980 PF16884 N-terminal domain of oxidoreductase PP4_RS19980 PF00107 Zinc-binding dehydrogenase PP4_RS19985 PF01757 Acyltransferase family PP4_RS19990 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PP4_RS20000 PF02350 UDP-N-acetylglucosamine 2-epimerase PP4_RS20005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PP4_RS20005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PP4_RS20005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PP4_RS20045 PF00483 Nucleotidyl transferase PP4_RS20050 PF04321 RmlD substrate binding domain PP4_RS20055 PF16363 GDP-mannose 4,6 dehydratase PP4_RS20060 PF02719 Polysaccharide biosynthesis protein PP4_RS20065 PF00953 Glycosyl transferase family 4 PP4_RS20070 PF01370 NAD dependent epimerase/dehydratase family PP4_RS20080 PF00862 Sucrose synthase PP4_RS20080 PF00534 Glycosyl transferases group 1 PP4_RS20105 PF01943 Polysaccharide biosynthesis protein PP4_RS20110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PP4_RS20115 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS20120 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PP4_RS20130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PP4_RS20130 PF10996 Beta-Casp domain PP4_RS20130 PF00753 Metallo-beta-lactamase superfamily PP4_RS20140 PF00216 Bacterial DNA-binding protein PP4_RS20145 PF01757 Acyltransferase family PP4_RS20150 PF00575 S1 RNA binding domain PP4_RS20155 PF02224 Cytidylate kinase PP4_RS20160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PP4_RS20165 PF01817 Chorismate mutase type II PP4_RS20165 PF01842 ACT domain PP4_RS20165 PF00800 Prephenate dehydratase PP4_RS20170 PF00266 Aminotransferase class-V PP4_RS20175 PF03989 DNA gyrase C-terminal domain, beta-propeller PP4_RS20175 PF00521 DNA gyrase/topoisomerase IV, subunit A PP4_RS20180 PF01008 Initiation factor 2 subunit family PP4_RS20190 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS20195 PF00106 short chain dehydrogenase PP4_RS20205 PF08448 PAS fold PP4_RS20205 PF00563 EAL domain PP4_RS20205 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS20210 PF00005 ABC transporter PP4_RS20210 PF00664 ABC transporter transmembrane region PP4_RS20220 PF17773 UPF0176 acylphosphatase like domain PP4_RS20220 PF00581 Rhodanese-like domain PP4_RS20225 PF01722 BolA-like protein PP4_RS20235 PF10415 Fumarase C C-terminus PP4_RS20235 PF00206 Lyase PP4_RS20240 PF00892 EamA-like transporter family PP4_RS20245 PF03976 Polyphosphate kinase 2 (PPK2) PP4_RS20250 PF01266 FAD dependent oxidoreductase PP4_RS20250 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PP4_RS20255 PF13537 Glutamine amidotransferase domain PP4_RS20255 PF00733 Asparagine synthase PP4_RS20260 PF02875 Mur ligase family, glutamate ligase domain PP4_RS20260 PF08245 Mur ligase middle domain PP4_RS20260 PF08443 RimK-like ATP-grasp domain PP4_RS20265 PF05343 M42 glutamyl aminopeptidase PP4_RS20270 PF06794 Uncharacterised protein family (UPF0270) PP4_RS20275 PF02599 Global regulator protein family PP4_RS20285 PF00561 alpha/beta hydrolase fold PP4_RS20285 PF00106 short chain dehydrogenase PP4_RS20290 PF01627 Hpt domain PP4_RS20290 PF00989 PAS fold PP4_RS20290 PF00072 Response regulator receiver domain PP4_RS20290 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS20290 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS20295 PF00072 Response regulator receiver domain PP4_RS20295 PF00196 Bacterial regulatory proteins, luxR family PP4_RS20320 PF00474 Sodium:solute symporter family PP4_RS20325 PF04341 Protein of unknown function, DUF485 PP4_RS20330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS20350 PF04333 MlaA lipoprotein PP4_RS20360 PF03279 Bacterial lipid A biosynthesis acyltransferase PP4_RS20365 PF03775 Septum formation inhibitor MinC, C-terminal domain PP4_RS20365 PF05209 Septum formation inhibitor MinC, N-terminal domain PP4_RS20370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PP4_RS20375 PF03776 Septum formation topological specificity factor MinE PP4_RS20380 PF00849 RNA pseudouridylate synthase PP4_RS20385 PF02127 Aminopeptidase I zinc metalloprotease (M18) PP4_RS20390 PF00924 Mechanosensitive ion channel PP4_RS20395 PF07702 UTRA domain PP4_RS20395 PF00392 Bacterial regulatory proteins, gntR family PP4_RS20410 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS20420 PF08402 TOBE domain PP4_RS20420 PF00005 ABC transporter PP4_RS20430 PF00109 Beta-ketoacyl synthase, N-terminal domain PP4_RS20430 PF14765 Polyketide synthase dehydratase PP4_RS20430 PF08990 Erythronolide synthase docking PP4_RS20430 PF09277 Erythronolide synthase, docking PP4_RS20430 PF16197 Ketoacyl-synthetase C-terminal extension PP4_RS20430 PF02801 Beta-ketoacyl synthase, C-terminal domain PP4_RS20430 PF00698 Acyl transferase domain PP4_RS20430 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS20430 PF08659 KR domain PP4_RS20430 PF00550 Phosphopantetheine attachment site PP4_RS20435 PF11818 C-terminal domain of tail specific protease (DUF3340) PP4_RS20435 PF17804 Tail specific protease N-terminal domain PP4_RS20435 PF03572 Peptidase family S41 PP4_RS20435 PF00595 PDZ domain PP4_RS20440 PF13188 PAS domain PP4_RS20440 PF03707 Bacterial signalling protein N terminal repeat PP4_RS20440 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS20440 PF00563 EAL domain PP4_RS20455 PF06803 Protein of unknown function (DUF1232) PP4_RS20460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS20460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PP4_RS20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS20465 PF03466 LysR substrate binding domain PP4_RS20475 PF18267 Rubredoxin NAD+ reductase C-terminal domain PP4_RS20475 PF04324 BFD-like [2Fe-2S] binding domain PP4_RS20475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PP4_RS20475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PP4_RS20475 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS20475 PF13806 Rieske-like [2Fe-2S] domain PP4_RS20480 PF04324 BFD-like [2Fe-2S] binding domain PP4_RS20480 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS20480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PP4_RS20480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PP4_RS20480 PF18267 Rubredoxin NAD+ reductase C-terminal domain PP4_RS20480 PF13806 Rieske-like [2Fe-2S] domain PP4_RS20485 PF01568 Molydopterin dinucleotide binding domain PP4_RS20485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS20485 PF00384 Molybdopterin oxidoreductase PP4_RS20495 PF00557 Metallopeptidase family M24 PP4_RS20525 PF04381 Putative exonuclease, RdgC PP4_RS20530 PF01758 Sodium Bile acid symporter family PP4_RS20535 PF00893 Small Multidrug Resistance protein PP4_RS20540 PF07690 Major Facilitator Superfamily PP4_RS20545 PF07690 Major Facilitator Superfamily PP4_RS20550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS20550 PF00672 HAMP domain PP4_RS20550 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS20555 PF02646 RmuC family PP4_RS20575 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PP4_RS20580 PF03466 LysR substrate binding domain PP4_RS20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS20600 PF00255 Glutathione peroxidase PP4_RS20610 PF01047 MarR family PP4_RS20615 PF02654 Cobalamin-5-phosphate synthase PP4_RS20620 PF00300 Histidine phosphatase superfamily (branch 1) PP4_RS20625 PF02277 Phosphoribosyltransferase PP4_RS20630 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PP4_RS20635 PF07685 CobB/CobQ-like glutamine amidotransferase domain PP4_RS20635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PP4_RS20640 PF00155 Aminotransferase class I and II PP4_RS20645 PF03186 CobD/Cbib protein PP4_RS20645 PF17113 Regulatory signalling modulator protein AmpE PP4_RS20650 PF00881 Nitroreductase family PP4_RS20655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PP4_RS20655 PF07685 CobB/CobQ-like glutamine amidotransferase domain PP4_RS20660 PF12557 Cob(I)alamin adenosyltransferase N terminal PP4_RS20660 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PP4_RS20670 PF07995 Glucose / Sorbosone dehydrogenase PP4_RS20675 PF00877 NlpC/P60 family PP4_RS20680 PF00877 NlpC/P60 family PP4_RS20685 PF00308 Bacterial dnaA protein PP4_RS20690 PF01594 AI-2E family transporter PP4_RS20700 PF00586 AIR synthase related protein, N-terminal domain PP4_RS20700 PF02769 AIR synthase related protein, C-terminal domain PP4_RS20705 PF00551 Formyl transferase PP4_RS20720 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PP4_RS20725 PF03819 MazG nucleotide pyrophosphohydrolase domain PP4_RS20730 PF04607 Region found in RelA / SpoT proteins PP4_RS20730 PF02824 TGS domain PP4_RS20730 PF13291 ACT domain PP4_RS20735 PF01938 TRAM domain PP4_RS20735 PF05958 tRNA (Uracil-5-)-methyltransferase PP4_RS20740 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS20745 PF00672 HAMP domain PP4_RS20745 PF16750 Sensor domain of 2-component histidine kinase PP4_RS20745 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS20745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS20750 PF00486 Transcriptional regulatory protein, C terminal PP4_RS20750 PF00072 Response regulator receiver domain PP4_RS20755 PF00672 HAMP domain PP4_RS20755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS20755 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS20755 PF01627 Hpt domain PP4_RS20755 PF00072 Response regulator receiver domain PP4_RS20755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS20760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS20760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS20775 PF00085 Thioredoxin PP4_RS20780 PF03960 ArsC family PP4_RS20785 PF03358 NADPH-dependent FMN reductase PP4_RS20800 PF01171 PP-loop family PP4_RS20805 PF04893 Yip1 domain PP4_RS20810 PF10263 SprT-like family PP4_RS20815 PF00175 Oxidoreductase NAD-binding domain PP4_RS20815 PF00970 Oxidoreductase FAD-binding domain PP4_RS20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS20820 PF03466 LysR substrate binding domain PP4_RS20825 PF01219 Prokaryotic diacylglycerol kinase PP4_RS20835 PF03942 DTW domain PP4_RS20855 PF02631 RecX family PP4_RS20860 PF00154 recA bacterial DNA recombination protein PP4_RS20865 PF02464 Competence-damaged protein PP4_RS20875 PF05190 MutS family domain IV PP4_RS20875 PF00488 MutS domain V PP4_RS20875 PF05192 MutS domain III PP4_RS20875 PF01624 MutS domain I PP4_RS20875 PF05188 MutS domain II PP4_RS20880 PF11953 Domain of unknown function (DUF3470) PP4_RS20880 PF00037 4Fe-4S binding domain PP4_RS20890 PF04542 Sigma-70 region 2 PP4_RS20890 PF04539 Sigma-70 region 3 PP4_RS20890 PF04545 Sigma-70, region 4 PP4_RS20890 PF00140 Sigma-70 factor, region 1.2 PP4_RS20895 PF01551 Peptidase family M23 PP4_RS20895 PF01476 LysM domain PP4_RS20905 PF01975 Survival protein SurE PP4_RS20910 PF01142 tRNA pseudouridine synthase D (TruD) PP4_RS20915 PF02542 YgbB family PP4_RS20920 PF00756 Putative esterase PP4_RS20925 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS20925 PF00107 Zinc-binding dehydrogenase PP4_RS20930 PF03466 LysR substrate binding domain PP4_RS20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS20935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PP4_RS20940 PF04977 Septum formation initiator PP4_RS20945 PF03952 Enolase, N-terminal domain PP4_RS20945 PF00113 Enolase, C-terminal TIM barrel domain PP4_RS20950 PF00793 DAHP synthetase I family PP4_RS20955 PF00117 Glutamine amidotransferase class-I PP4_RS20955 PF06418 CTP synthase N-terminus PP4_RS20960 PF09179 TilS substrate binding domain PP4_RS20960 PF01171 PP-loop family PP4_RS20960 PF11734 TilS substrate C-terminal domain PP4_RS20965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PP4_RS20970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PP4_RS20970 PF07733 Bacterial DNA polymerase III alpha NTPase domain PP4_RS20970 PF14579 Helix-hairpin-helix motif PP4_RS20970 PF02811 PHP domain PP4_RS20970 PF01336 OB-fold nucleic acid binding domain PP4_RS20975 PF01351 Ribonuclease HII PP4_RS20980 PF02684 Lipid-A-disaccharide synthetase PP4_RS20985 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS20985 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PP4_RS20990 PF07977 FabA-like domain PP4_RS20995 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS20995 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PP4_RS21000 PF03938 Outer membrane protein (OmpH-like) PP4_RS21005 PF01103 Surface antigen PP4_RS21005 PF07244 Surface antigen variable number repeat PP4_RS21010 PF17820 PDZ domain PP4_RS21010 PF13180 PDZ domain PP4_RS21010 PF02163 Peptidase family M50 PP4_RS21015 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PP4_RS21015 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PP4_RS21015 PF13288 DXP reductoisomerase C-terminal domain PP4_RS21025 PF01255 Putative undecaprenyl diphosphate synthase PP4_RS21030 PF01765 Ribosome recycling factor PP4_RS21035 PF00696 Amino acid kinase family PP4_RS21040 PF00889 Elongation factor TS PP4_RS21045 PF00318 Ribosomal protein S2 PP4_RS21050 PF00557 Metallopeptidase family M24 PP4_RS21055 PF01966 HD domain PP4_RS21055 PF01909 Nucleotidyltransferase domain PP4_RS21055 PF01842 ACT domain PP4_RS21055 PF08335 GlnD PII-uridylyltransferase PP4_RS21060 PF00155 Aminotransferase class I and II PP4_RS21065 PF00999 Sodium/hydrogen exchanger family PP4_RS21070 PF01381 Helix-turn-helix PP4_RS21075 PF03960 ArsC family PP4_RS21080 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PP4_RS21080 PF14602 Hexapeptide repeat of succinyl-transferase PP4_RS21085 PF00266 Aminotransferase class-V PP4_RS21090 PF02657 Fe-S metabolism associated domain PP4_RS21095 PF00899 ThiF family PP4_RS21100 PF00535 Glycosyl transferase family 2 PP4_RS21100 PF07238 PilZ domain PP4_RS21100 PF03552 Cellulose synthase PP4_RS21105 PF07687 Peptidase dimerisation domain PP4_RS21105 PF01546 Peptidase family M20/M25/M40 PP4_RS21110 PF13847 Methyltransferase domain PP4_RS21120 PF00313 'Cold-shock' DNA-binding domain PP4_RS21125 PF01553 Acyltransferase PP4_RS21140 PF00873 AcrB/AcrD/AcrF family PP4_RS21145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS21155 PF04445 Putative SAM-dependent methyltransferase PP4_RS21185 PF00814 Glycoprotease family PP4_RS21190 PF05191 Adenylate kinase, active site lid PP4_RS21195 PF00311 Phosphoenolpyruvate carboxylase PP4_RS21210 PF13488 Glycine zipper PP4_RS21210 PF00691 OmpA family PP4_RS21220 PF12146 Serine aminopeptidase, S33 PP4_RS21240 PF00152 tRNA synthetases class II (D, K and N) PP4_RS21240 PF01336 OB-fold nucleic acid binding domain PP4_RS21245 PF00472 RF-1 domain PP4_RS21245 PF03462 PCRF domain PP4_RS21250 PF00360 Phytochrome region PP4_RS21250 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS21250 PF00563 EAL domain PP4_RS21250 PF01590 GAF domain PP4_RS21255 PF01339 CheB methylesterase PP4_RS21255 PF00072 Response regulator receiver domain PP4_RS21260 PF01584 CheW-like domain PP4_RS21260 PF01627 Hpt domain PP4_RS21260 PF00072 Response regulator receiver domain PP4_RS21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS21270 PF01739 CheR methyltransferase, SAM binding domain PP4_RS21280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS21280 PF00672 HAMP domain PP4_RS21280 PF12729 Four helix bundle sensory module for signal transduction PP4_RS21285 PF04391 Protein of unknown function (DUF533) PP4_RS21290 PF13416 Bacterial extracellular solute-binding protein PP4_RS21295 PF00005 ABC transporter PP4_RS21295 PF08402 TOBE domain PP4_RS21300 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS21305 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS21310 PF00171 Aldehyde dehydrogenase family PP4_RS21315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS21320 PF17768 RecJ OB domain PP4_RS21320 PF01368 DHH family PP4_RS21320 PF02272 DHHA1 domain PP4_RS21325 PF07152 YaeQ protein PP4_RS21330 PF02515 CoA-transferase family III PP4_RS21355 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS21355 PF14821 Threonine synthase N terminus PP4_RS21360 PF00742 Homoserine dehydrogenase PP4_RS21360 PF01842 ACT domain PP4_RS21360 PF03447 Homoserine dehydrogenase, NAD binding domain PP4_RS21365 PF13098 Thioredoxin-like domain PP4_RS21365 PF10411 Disulfide bond isomerase protein N-terminus PP4_RS21370 PF00589 Phage integrase family PP4_RS21370 PF02899 Phage integrase, N-terminal SAM-like domain PP4_RS21380 PF03061 Thioesterase superfamily PP4_RS21385 PF01245 Ribosomal protein L19 PP4_RS21390 PF01746 tRNA (Guanine-1)-methyltransferase PP4_RS21395 PF05239 PRC-barrel domain PP4_RS21395 PF01782 RimM N-terminal domain PP4_RS21400 PF00886 Ribosomal protein S16 PP4_RS21405 PF02978 Signal peptide binding domain PP4_RS21405 PF02881 SRP54-type protein, helical bundle domain PP4_RS21405 PF00448 SRP54-type protein, GTPase domain PP4_RS21415 PF00571 CBS domain PP4_RS21415 PF03471 Transporter associated domain PP4_RS21415 PF01595 Cyclin M transmembrane N-terminal domain PP4_RS21420 PF00083 Sugar (and other) transporter PP4_RS21420 PF07690 Major Facilitator Superfamily PP4_RS21425 PF02222 ATP-grasp domain PP4_RS21425 PF01370 NAD dependent epimerase/dehydratase family PP4_RS21440 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS21445 PF00293 NUDIX domain PP4_RS21450 PF09297 NADH pyrophosphatase zinc ribbon domain PP4_RS21450 PF00293 NUDIX domain PP4_RS21480 PF02501 Type II secretion system (T2SS), protein I PP4_RS21480 PF07963 Prokaryotic N-terminal methylation motif PP4_RS21490 PF07963 Prokaryotic N-terminal methylation motif PP4_RS21490 PF08334 Type II secretion system (T2SS), protein G PP4_RS21495 PF00482 Type II secretion system (T2SS), protein F PP4_RS21500 PF00437 Type II/IV secretion system protein PP4_RS21505 PF00263 Bacterial type II and III secretion system protein PP4_RS21505 PF03958 Bacterial type II/III secretion system short domain PP4_RS21525 PF03934 Type II secretion system (T2SS), protein K PP4_RS21530 PF02416 mttA/Hcf106 family PP4_RS21535 PF02416 mttA/Hcf106 family PP4_RS21540 PF00902 Sec-independent protein translocase protein (TatC) PP4_RS21545 PF01784 NIF3 (NGG1p interacting factor 3) PP4_RS21550 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PP4_RS21550 PF02769 AIR synthase related protein, C-terminal domain PP4_RS21550 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PP4_RS21555 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS21555 PF01464 Transglycosylase SLT domain PP4_RS21560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PP4_RS21565 PF07731 Multicopper oxidase PP4_RS21565 PF00394 Multicopper oxidase PP4_RS21565 PF07732 Multicopper oxidase PP4_RS21575 PF00117 Glutamine amidotransferase class-I PP4_RS21575 PF00958 GMP synthase C terminal domain PP4_RS21575 PF02540 NAD synthase PP4_RS21580 PF00478 IMP dehydrogenase / GMP reductase domain PP4_RS21580 PF00571 CBS domain PP4_RS21595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS21595 PF03466 LysR substrate binding domain PP4_RS21600 PF13742 OB-fold nucleic acid binding domain PP4_RS21600 PF02601 Exonuclease VII, large subunit PP4_RS21605 PF01551 Peptidase family M23 PP4_RS21605 PF01476 LysM domain PP4_RS21605 PF08525 Opacity-associated protein A N-terminal motif PP4_RS21610 PF00682 HMGL-like PP4_RS21610 PF08502 LeuA allosteric (dimerisation) domain PP4_RS21615 PF18063 Beta barrel Pore-forming domain PP4_RS21620 PF01081 KDPG and KHG aldolase PP4_RS21625 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PP4_RS21630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PP4_RS21630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PP4_RS21635 PF01418 Helix-turn-helix domain, rpiR family PP4_RS21635 PF01380 SIS domain PP4_RS21640 PF01263 Aldose 1-epimerase PP4_RS21645 PF04966 Carbohydrate-selective porin, OprB family PP4_RS21650 PF00005 ABC transporter PP4_RS21650 PF17912 MalK OB fold domain PP4_RS21655 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS21660 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS21665 PF01547 Bacterial extracellular solute-binding protein PP4_RS21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS21670 PF00672 HAMP domain PP4_RS21670 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS21675 PF00486 Transcriptional regulatory protein, C terminal PP4_RS21675 PF00072 Response regulator receiver domain PP4_RS21680 PF02685 Glucokinase PP4_RS21685 PF00920 Dehydratase family PP4_RS21690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PP4_RS21690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS21695 PF04542 Sigma-70 region 2 PP4_RS21695 PF08281 Sigma-70, region 4 PP4_RS21705 PF04886 PT repeat PP4_RS21705 PF07715 TonB-dependent Receptor Plug Domain PP4_RS21705 PF00593 TonB dependent receptor PP4_RS21710 PF01126 Heme oxygenase PP4_RS21715 PF04304 Protein of unknown function (DUF454) PP4_RS21720 PF13520 Amino acid permease PP4_RS21725 PF13520 Amino acid permease PP4_RS21735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PP4_RS21735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PP4_RS21740 PF00696 Amino acid kinase family PP4_RS21750 PF00158 Sigma-54 interaction domain PP4_RS21750 PF18024 Helix-turn-helix domain PP4_RS21755 PF03616 Sodium/glutamate symporter PP4_RS21760 PF01597 Glycine cleavage H-protein PP4_RS21765 PF02347 Glycine cleavage system P-protein PP4_RS21770 PF03313 Serine dehydratase alpha chain PP4_RS21770 PF03315 Serine dehydratase beta chain PP4_RS21775 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS21775 PF01571 Aminomethyltransferase folate-binding domain PP4_RS21780 PF00313 'Cold-shock' DNA-binding domain PP4_RS21790 PF03739 Lipopolysaccharide export system permease LptF/LptG PP4_RS21795 PF03739 Lipopolysaccharide export system permease LptF/LptG PP4_RS21800 PF00883 Cytosol aminopeptidase family, catalytic domain PP4_RS21800 PF02789 Cytosol aminopeptidase family, N-terminal domain PP4_RS21805 PF04364 DNA polymerase III chi subunit, HolC PP4_RS21815 PF08264 Anticodon-binding domain of tRNA PP4_RS21815 PF00133 tRNA synthetases class I (I, L, M and V) PP4_RS21815 PF10458 Valyl tRNA synthetase tRNA binding arm PP4_RS21820 PF05971 RNA methyltransferase PP4_RS21825 PF00216 Bacterial DNA-binding protein PP4_RS21830 PF04245 37-kD nucleoid-associated bacterial protein PP4_RS21835 PF01541 GIY-YIG catalytic domain PP4_RS21845 PF07690 Major Facilitator Superfamily PP4_RS21850 PF00392 Bacterial regulatory proteins, gntR family PP4_RS21850 PF07729 FCD domain PP4_RS21860 PF00155 Aminotransferase class I and II PP4_RS21865 PF00815 Histidinol dehydrogenase PP4_RS21870 PF01634 ATP phosphoribosyltransferase PP4_RS21875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PP4_RS21890 PF05494 MlaC protein PP4_RS21895 PF02470 MlaD protein PP4_RS21900 PF02405 Permease MlaE PP4_RS21905 PF00005 ABC transporter PP4_RS21910 PF00571 CBS domain PP4_RS21910 PF01380 SIS domain PP4_RS21925 PF03968 OstA-like protein PP4_RS21930 PF12399 Branched-chain amino acid ATP-binding cassette transporter PP4_RS21930 PF00005 ABC transporter PP4_RS21935 PF04963 Sigma-54 factor, core binding domain PP4_RS21935 PF00309 Sigma-54 factor, Activator interacting domain (AID) PP4_RS21935 PF04552 Sigma-54, DNA binding domain PP4_RS21940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PP4_RS21945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PP4_RS21950 PF03668 P-loop ATPase protein family PP4_RS21955 PF00381 PTS HPr component phosphorylation site PP4_RS21960 PF02535 ZIP Zinc transporter PP4_RS21965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PP4_RS21965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PP4_RS21975 PF00206 Lyase PP4_RS21975 PF10415 Fumarase C C-terminus PP4_RS21985 PF01523 Putative modulator of DNA gyrase PP4_RS21990 PF04751 Protein of unknown function (DUF615) PP4_RS21995 PF01523 Putative modulator of DNA gyrase PP4_RS22000 PF00795 Carbon-nitrogen hydrolase PP4_RS22010 PF00575 S1 RNA binding domain PP4_RS22010 PF10150 Ribonuclease E/G family PP4_RS22015 PF02545 Maf-like protein PP4_RS22025 PF04085 rod shape-determining protein MreC PP4_RS22035 PF02686 Glu-tRNAGln amidotransferase C subunit PP4_RS22040 PF01425 Amidase PP4_RS22045 PF02934 GatB/GatE catalytic domain PP4_RS22045 PF02637 GatB domain PP4_RS22050 PF05036 Sporulation related domain PP4_RS22050 PF03330 Lytic transglycolase PP4_RS22055 PF01699 Sodium/calcium exchanger protein PP4_RS22060 PF00324 Amino acid permease PP4_RS22070 PF00072 Response regulator receiver domain PP4_RS22070 PF02954 Bacterial regulatory protein, Fis family PP4_RS22075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS22075 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS22085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS22090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS22095 PF03573 outer membrane porin, OprD family PP4_RS22100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS22105 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22110 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22110 PF12911 N-terminal TM domain of oligopeptide transport permease C PP4_RS22115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PP4_RS22115 PF00005 ABC transporter PP4_RS22120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PP4_RS22120 PF00005 ABC transporter PP4_RS22130 PF02311 AraC-like ligand binding domain PP4_RS22130 PF12833 Helix-turn-helix domain PP4_RS22135 PF01593 Flavin containing amine oxidoreductase PP4_RS22145 PF13416 Bacterial extracellular solute-binding protein PP4_RS22150 PF03144 Elongation factor Tu domain 2 PP4_RS22150 PF00009 Elongation factor Tu GTP binding domain PP4_RS22150 PF16658 Class II release factor RF3, C-terminal domain PP4_RS22160 PF05973 Phage derived protein Gp49-like (DUF891) PP4_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PP4_RS22175 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22180 PF00571 CBS domain PP4_RS22180 PF00005 ABC transporter PP4_RS22185 PF00593 TonB dependent receptor PP4_RS22185 PF07660 Secretin and TonB N terminus short domain PP4_RS22185 PF07715 TonB-dependent Receptor Plug Domain PP4_RS22200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PP4_RS22200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PP4_RS22215 PF18331 PKHD-type hydroxylase C-terminal domain PP4_RS22215 PF13640 2OG-Fe(II) oxygenase superfamily PP4_RS22220 PF07715 TonB-dependent Receptor Plug Domain PP4_RS22220 PF00593 TonB dependent receptor PP4_RS22225 PF00175 Oxidoreductase NAD-binding domain PP4_RS22225 PF00667 FAD binding domain PP4_RS22225 PF00258 Flavodoxin PP4_RS22230 PF00795 Carbon-nitrogen hydrolase PP4_RS22235 PF00155 Aminotransferase class I and II PP4_RS22245 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PP4_RS22245 PF01926 50S ribosome-binding GTPase PP4_RS22250 PF13360 PQQ-like domain PP4_RS22260 PF03129 Anticodon binding domain PP4_RS22260 PF13393 Histidyl-tRNA synthetase PP4_RS22265 PF04551 GcpE protein PP4_RS22270 PF13464 Domain of unknown function (DUF4115) PP4_RS22280 PF04055 Radical SAM superfamily PP4_RS22285 PF00334 Nucleoside diphosphate kinase PP4_RS22290 PF04384 Iron-sulphur cluster assembly PP4_RS22295 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS22300 PF00012 Hsp70 protein PP4_RS22305 PF07743 HSCB C-terminal oligomerisation domain PP4_RS22305 PF00226 DnaJ domain PP4_RS22310 PF01521 Iron-sulphur cluster biosynthesis PP4_RS22315 PF01592 NifU-like N terminal domain PP4_RS22320 PF00266 Aminotransferase class-V PP4_RS22325 PF02082 Transcriptional regulator PP4_RS22330 PF06426 Serine acetyltransferase, N-terminal PP4_RS22330 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS22335 PF00588 SpoU rRNA Methylase family PP4_RS22340 PF00459 Inositol monophosphatase family PP4_RS22345 PF05433 Glycine zipper 2TM domain PP4_RS22350 PF02355 Protein export membrane protein PP4_RS22350 PF07549 SecD/SecF GG Motif PP4_RS22355 PF07549 SecD/SecF GG Motif PP4_RS22355 PF02355 Protein export membrane protein PP4_RS22355 PF13721 SecD export protein N-terminal TM region PP4_RS22360 PF02699 Preprotein translocase subunit PP4_RS22365 PF01702 Queuine tRNA-ribosyltransferase PP4_RS22370 PF02547 Queuosine biosynthesis protein PP4_RS22385 PF01266 FAD dependent oxidoreductase PP4_RS22410 PF05973 Phage derived protein Gp49-like (DUF891) PP4_RS22415 PF01062 Bestrophin, RFP-TM, chloride channel PP4_RS22420 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22425 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS22430 PF00005 ABC transporter PP4_RS22440 PF02769 AIR synthase related protein, C-terminal domain PP4_RS22440 PF00586 AIR synthase related protein, N-terminal domain PP4_RS22460 PF13302 Acetyltransferase (GNAT) domain PP4_RS22465 PF03692 Putative zinc- or iron-chelating domain PP4_RS22475 PF00155 Aminotransferase class I and II PP4_RS22480 PF01040 UbiA prenyltransferase family PP4_RS22485 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PP4_RS22490 PF00510 Cytochrome c oxidase subunit III PP4_RS22495 PF00115 Cytochrome C and Quinol oxidase polypeptide I PP4_RS22500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PP4_RS22500 PF06481 COX Aromatic Rich Motif PP4_RS22505 PF02600 Disulfide bond formation protein DsbB PP4_RS22510 PF00970 Oxidoreductase FAD-binding domain PP4_RS22510 PF00042 Globin PP4_RS22510 PF00175 Oxidoreductase NAD-binding domain PP4_RS22515 PF02954 Bacterial regulatory protein, Fis family PP4_RS22515 PF00158 Sigma-54 interaction domain PP4_RS22525 PF02321 Outer membrane efflux protein PP4_RS22530 PF00664 ABC transporter transmembrane region PP4_RS22530 PF00005 ABC transporter PP4_RS22530 PF03412 Peptidase C39 family PP4_RS22535 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS22540 PF13188 PAS domain PP4_RS22540 PF08448 PAS fold PP4_RS22540 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS22540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS22540 PF00072 Response regulator receiver domain PP4_RS22555 PF13533 Biotin-lipoyl like PP4_RS22560 PF00873 AcrB/AcrD/AcrF family PP4_RS22565 PF00486 Transcriptional regulatory protein, C terminal PP4_RS22565 PF00072 Response regulator receiver domain PP4_RS22570 PF00672 HAMP domain PP4_RS22570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS22570 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS22580 PF03573 outer membrane porin, OprD family PP4_RS22585 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS22585 PF00360 Phytochrome region PP4_RS22585 PF00563 EAL domain PP4_RS22585 PF01590 GAF domain PP4_RS22595 PF12843 Putative quorum-sensing-regulated virulence factor PP4_RS22600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PP4_RS22600 PF02378 Phosphotransferase system, EIIC PP4_RS22605 PF00294 pfkB family carbohydrate kinase PP4_RS22610 PF00381 PTS HPr component phosphorylation site PP4_RS22610 PF02896 PEP-utilising enzyme, TIM barrel domain PP4_RS22610 PF00391 PEP-utilising enzyme, mobile domain PP4_RS22610 PF05524 PEP-utilising enzyme, N-terminal PP4_RS22610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PP4_RS22615 PF00356 Bacterial regulatory proteins, lacI family PP4_RS22615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PP4_RS22620 PF01026 TatD related DNase PP4_RS22625 PF17113 Regulatory signalling modulator protein AmpE PP4_RS22630 PF01510 N-acetylmuramoyl-L-alanine amidase PP4_RS22640 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PP4_RS22640 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PP4_RS22645 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS22655 PF13426 PAS domain PP4_RS22655 PF08447 PAS fold PP4_RS22655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS22660 PF00534 Glycosyl transferases group 1 PP4_RS22660 PF13439 Glycosyltransferase Family 4 PP4_RS22670 PF00255 Glutathione peroxidase PP4_RS22675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS22685 PF01515 Phosphate acetyl/butaryl transferase PP4_RS22685 PF07085 DRTGG domain PP4_RS22690 PF13488 Glycine zipper PP4_RS22690 PF00691 OmpA family PP4_RS22695 PF00753 Metallo-beta-lactamase superfamily PP4_RS22715 PF00069 Protein kinase domain PP4_RS22715 PF13191 AAA ATPase domain PP4_RS22720 PF07044 Protein of unknown function (DUF1329) PP4_RS22730 PF13193 AMP-binding enzyme C-terminal domain PP4_RS22730 PF00501 AMP-binding enzyme PP4_RS22735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS22735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS22740 PF05175 Methyltransferase small domain PP4_RS22740 PF08468 Methyltransferase small domain N-terminal PP4_RS22745 PF01169 Uncharacterized protein family UPF0016 PP4_RS22755 PF02586 SOS response associated peptidase (SRAP) PP4_RS22795 PF06039 Malate:quinone oxidoreductase (Mqo) PP4_RS22815 PF00156 Phosphoribosyl transferase domain PP4_RS22825 PF00860 Permease family PP4_RS22830 PF00762 Ferrochelatase PP4_RS22835 PF01370 NAD dependent epimerase/dehydratase family PP4_RS22835 PF08338 Domain of unknown function (DUF1731) PP4_RS22840 PF01593 Flavin containing amine oxidoreductase PP4_RS22850 PF13411 MerR HTH family regulatory protein PP4_RS22855 PF00875 DNA photolyase PP4_RS22855 PF03441 FAD binding domain of DNA photolyase PP4_RS22860 PF00106 short chain dehydrogenase PP4_RS22865 PF09411 Lipid A 3-O-deacylase (PagL) PP4_RS22870 PF01177 Asp/Glu/Hydantoin racemase PP4_RS22875 PF00899 ThiF family PP4_RS22880 PF05175 Methyltransferase small domain PP4_RS22880 PF17827 PrmC N-terminal domain PP4_RS22885 PF00472 RF-1 domain PP4_RS22885 PF03462 PCRF domain PP4_RS22890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PP4_RS22890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PP4_RS22890 PF01488 Shikimate / quinate 5-dehydrogenase PP4_RS22900 PF03550 Outer membrane lipoprotein LolB PP4_RS22905 PF08544 GHMP kinases C terminal PP4_RS22905 PF00288 GHMP kinases N terminal domain PP4_RS22915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PP4_RS22915 PF14572 Phosphoribosyl synthetase-associated domain PP4_RS22920 PF01386 Ribosomal L25p family PP4_RS22920 PF14693 Ribosomal protein TL5, C-terminal domain PP4_RS22925 PF01195 Peptidyl-tRNA hydrolase PP4_RS22930 PF06071 Protein of unknown function (DUF933) PP4_RS22930 PF01926 50S ribosome-binding GTPase PP4_RS22935 PF00916 Sulfate permease family PP4_RS22935 PF01740 STAS domain PP4_RS22945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PP4_RS22945 PF00529 HlyD membrane-fusion protein of T1SS PP4_RS22950 PF02321 Outer membrane efflux protein PP4_RS22955 PF01594 AI-2E family transporter PP4_RS22960 PF00999 Sodium/hydrogen exchanger family PP4_RS22960 PF02254 TrkA-N domain PP4_RS22965 PF03976 Polyphosphate kinase 2 (PPK2) PP4_RS22970 PF00857 Isochorismatase family PP4_RS22985 PF00171 Aldehyde dehydrogenase family PP4_RS22995 PF00924 Mechanosensitive ion channel PP4_RS22995 PF12794 Mechanosensitive ion channel inner membrane domain 1 PP4_RS22995 PF12795 Mechanosensitive ion channel porin domain PP4_RS23000 PF12833 Helix-turn-helix domain PP4_RS23000 PF02805 Metal binding domain of Ada PP4_RS23000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PP4_RS23000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PP4_RS23010 PF04542 Sigma-70 region 2 PP4_RS23010 PF08281 Sigma-70, region 4 PP4_RS23025 PF07690 Major Facilitator Superfamily PP4_RS23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS23045 PF03466 LysR substrate binding domain PP4_RS23055 PF00583 Acetyltransferase (GNAT) family PP4_RS23080 PF05981 CreA protein PP4_RS23085 PF01472 PUA domain PP4_RS23085 PF00696 Amino acid kinase family PP4_RS23090 PF01926 50S ribosome-binding GTPase PP4_RS23090 PF01018 GTP1/OBG PP4_RS23095 PF01016 Ribosomal L27 protein PP4_RS23100 PF00829 Ribosomal prokaryotic L21 protein PP4_RS23105 PF00348 Polyprenyl synthetase PP4_RS23110 PF03831 PhnA domain PP4_RS23110 PF08274 PhnA Zinc-Ribbon PP4_RS23120 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PP4_RS23120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS23130 PF03350 Uncharacterized protein family, UPF0114 PP4_RS23140 PF13654 AAA domain PP4_RS23140 PF05362 Lon protease (S16) C-terminal proteolytic domain PP4_RS23165 PF03449 Transcription elongation factor, N-terminal PP4_RS23165 PF01272 Transcription elongation factor, GreA/GreB, C-term PP4_RS23170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PP4_RS23170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PP4_RS23175 PF12848 ABC transporter PP4_RS23175 PF00005 ABC transporter PP4_RS23185 PF03707 Bacterial signalling protein N terminal repeat PP4_RS23185 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS23185 PF00563 EAL domain PP4_RS23190 PF00464 Serine hydroxymethyltransferase PP4_RS23200 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS23215 PF00056 lactate/malate dehydrogenase, NAD binding domain PP4_RS23215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PP4_RS23260 PF13356 Arm DNA-binding domain PP4_RS23260 PF00589 Phage integrase family PP4_RS23270 PF00114 Pilin (bacterial filament) PP4_RS23270 PF07963 Prokaryotic N-terminal methylation motif PP4_RS23275 PF00482 Type II secretion system (T2SS), protein F PP4_RS23280 PF06750 Bacterial Peptidase A24 N-terminal domain PP4_RS23280 PF01478 Type IV leader peptidase family PP4_RS23285 PF01121 Dephospho-CoA kinase PP4_RS23290 PF03884 DNA gyrase inhibitor YacG PP4_RS23310 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS23340 PF17871 AAA lid domain PP4_RS23340 PF02861 Clp amino terminal domain, pathogenicity island component PP4_RS23340 PF10431 C-terminal, D2-small domain, of ClpB protein PP4_RS23340 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS23340 PF07724 AAA domain (Cdc48 subfamily) PP4_RS23345 PF02578 Multi-copper polyphenol oxidoreductase laccase PP4_RS23350 PF01479 S4 domain PP4_RS23350 PF00849 RNA pseudouridylate synthase PP4_RS23355 PF13525 Outer membrane lipoprotein PP4_RS23365 PF01266 FAD dependent oxidoreductase PP4_RS23370 PF07963 Prokaryotic N-terminal methylation motif PP4_RS23370 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PP4_RS23395 PF02401 LytB protein PP4_RS23400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PP4_RS23405 PF01252 Signal peptidase (SPase) II PP4_RS23410 PF08264 Anticodon-binding domain of tRNA PP4_RS23410 PF00133 tRNA synthetases class I (I, L, M and V) PP4_RS23410 PF06827 Zinc finger found in FPG and IleRS PP4_RS23415 PF06574 FAD synthetase PP4_RS23415 PF01687 Riboflavin kinase PP4_RS23420 PF03023 Lipid II flippase MurJ PP4_RS23425 PF01649 Ribosomal protein S20 PP4_RS23430 PF02470 MlaD protein PP4_RS23435 PF04403 Paraquat-inducible protein A PP4_RS23440 PF04403 Paraquat-inducible protein A PP4_RS23470 PF01794 Ferric reductase like transmembrane component PP4_RS23475 PF00174 Oxidoreductase molybdopterin binding domain PP4_RS23480 PF01066 CDP-alcohol phosphatidyltransferase PP4_RS23485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PP4_RS23485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PP4_RS23490 PF10369 Small subunit of acetolactate synthase PP4_RS23495 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS23495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS23495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS23500 PF04287 tRNA pseudouridine synthase C PP4_RS23510 PF00905 Penicillin binding protein transpeptidase domain PP4_RS23510 PF14814 Bifunctional transglycosylase second domain PP4_RS23510 PF00912 Transglycosylase PP4_RS23530 PF00005 ABC transporter PP4_RS23535 PF01032 FecCD transport family PP4_RS23540 PF01497 Periplasmic binding protein PP4_RS23550 PF03749 Sugar fermentation stimulation protein RE domain PP4_RS23550 PF17746 SfsA N-terminal OB domain PP4_RS23555 PF00155 Aminotransferase class I and II PP4_RS23560 PF01258 Prokaryotic dksA/traR C4-type zinc finger PP4_RS23565 PF00749 tRNA synthetases class I (E and Q), catalytic domain PP4_RS23575 PF00989 PAS fold PP4_RS23575 PF08447 PAS fold PP4_RS23575 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS23575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS23580 PF00072 Response regulator receiver domain PP4_RS23580 PF02954 Bacterial regulatory protein, Fis family PP4_RS23580 PF00158 Sigma-54 interaction domain PP4_RS23585 PF12626 Polymerase A arginine-rich C-terminus PP4_RS23585 PF12627 Probable RNA and SrmB- binding site of polymerase A PP4_RS23585 PF01743 Poly A polymerase head domain PP4_RS23590 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PP4_RS23595 PF02548 Ketopantoate hydroxymethyltransferase PP4_RS23600 PF02569 Pantoate-beta-alanine ligase PP4_RS23605 PF00342 Phosphoglucose isomerase PP4_RS23610 PF16177 Acetyl-coenzyme A synthetase N-terminus PP4_RS23610 PF00501 AMP-binding enzyme PP4_RS23610 PF13193 AMP-binding enzyme C-terminal domain PP4_RS23635 PF04972 BON domain PP4_RS23645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PP4_RS23645 PF01138 3' exoribonuclease family, domain 1 PP4_RS23645 PF03725 3' exoribonuclease family, domain 2 PP4_RS23645 PF00575 S1 RNA binding domain PP4_RS23645 PF00013 KH domain PP4_RS23650 PF00312 Ribosomal protein S15 PP4_RS23655 PF01509 TruB family pseudouridylate synthase (N terminal domain) PP4_RS23655 PF09157 Pseudouridine synthase II TruB, C-terminal PP4_RS23655 PF16198 tRNA pseudouridylate synthase B C-terminal domain PP4_RS23660 PF02033 Ribosome-binding factor A PP4_RS23665 PF04760 Translation initiation factor IF-2, N-terminal region PP4_RS23665 PF08364 Bacterial translation initiation factor IF-2 associated region PP4_RS23665 PF11987 Translation-initiation factor 2 PP4_RS23665 PF00009 Elongation factor Tu GTP binding domain PP4_RS23670 PF13184 NusA-like KH domain PP4_RS23670 PF08529 NusA N-terminal domain PP4_RS23670 PF00575 S1 RNA binding domain PP4_RS23675 PF17384 RimP C-terminal SH3 domain PP4_RS23675 PF02576 RimP N-terminal domain PP4_RS23690 PF03840 Preprotein translocase SecG subunit PP4_RS23695 PF00121 Triosephosphate isomerase PP4_RS23700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PP4_RS23700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PP4_RS23700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PP4_RS23700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PP4_RS23705 PF00809 Pterin binding enzyme PP4_RS23710 PF06480 FtsH Extracellular PP4_RS23710 PF01434 Peptidase family M41 PP4_RS23710 PF17862 AAA+ lid domain PP4_RS23710 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS23715 PF01728 FtsJ-like methyltransferase PP4_RS23720 PF01985 CRS1 / YhbY (CRM) domain PP4_RS23730 PF03449 Transcription elongation factor, N-terminal PP4_RS23730 PF01272 Transcription elongation factor, GreA/GreB, C-term PP4_RS23735 PF02142 MGS-like domain PP4_RS23735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PP4_RS23735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PP4_RS23740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PP4_RS23740 PF00117 Glutamine amidotransferase class-I PP4_RS23745 PF05173 Dihydrodipicolinate reductase, C-terminus PP4_RS23745 PF01113 Dihydrodipicolinate reductase, N-terminus PP4_RS23750 PF00684 DnaJ central domain PP4_RS23750 PF01556 DnaJ C terminal domain PP4_RS23750 PF00226 DnaJ domain PP4_RS23755 PF00012 Hsp70 protein PP4_RS23760 PF01025 GrpE PP4_RS23765 PF02463 RecF/RecN/SMC N terminal domain PP4_RS23770 PF01475 Ferric uptake regulator family PP4_RS23775 PF04355 SmpA / OmlA family PP4_RS23780 PF03364 Polyketide cyclase / dehydrase and lipid transport PP4_RS23785 PF01668 SmpB protein PP4_RS23790 PF07729 FCD domain PP4_RS23790 PF00392 Bacterial regulatory proteins, gntR family PP4_RS23795 PF02652 L-lactate permease PP4_RS23800 PF01070 FMN-dependent dehydrogenase PP4_RS23835 PF02615 Malate/L-lactate dehydrogenase PP4_RS23845 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS23850 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS23855 PF00005 ABC transporter PP4_RS23860 PF00557 Metallopeptidase family M24 PP4_RS23865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PP4_RS23875 PF00593 TonB dependent receptor PP4_RS23875 PF07715 TonB-dependent Receptor Plug Domain PP4_RS23885 PF07690 Major Facilitator Superfamily PP4_RS23890 PF03466 LysR substrate binding domain PP4_RS23890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS23900 PF00324 Amino acid permease PP4_RS23905 PF13378 Enolase C-terminal domain-like PP4_RS23905 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PP4_RS23910 PF07690 Major Facilitator Superfamily PP4_RS23915 PF00392 Bacterial regulatory proteins, gntR family PP4_RS23920 PF16197 Ketoacyl-synthetase C-terminal extension PP4_RS23920 PF00698 Acyl transferase domain PP4_RS23920 PF00109 Beta-ketoacyl synthase, N-terminal domain PP4_RS23920 PF02801 Beta-ketoacyl synthase, C-terminal domain PP4_RS23920 PF08659 KR domain PP4_RS23920 PF00550 Phosphopantetheine attachment site PP4_RS23920 PF14765 Polyketide synthase dehydratase PP4_RS23920 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS23925 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS23935 PF13302 Acetyltransferase (GNAT) domain PP4_RS23940 PF00300 Histidine phosphatase superfamily (branch 1) PP4_RS23945 PF00850 Histone deacetylase domain PP4_RS23955 PF00270 DEAD/DEAH box helicase PP4_RS23955 PF00271 Helicase conserved C-terminal domain PP4_RS23960 PF00892 EamA-like transporter family PP4_RS23965 PF14579 Helix-hairpin-helix motif PP4_RS23965 PF00929 Exonuclease PP4_RS23965 PF02811 PHP domain PP4_RS23965 PF11490 DNA polymerase III polC-type N-terminus II PP4_RS23965 PF07733 Bacterial DNA polymerase III alpha NTPase domain PP4_RS23965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PP4_RS23975 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) PP4_RS24015 PF07690 Major Facilitator Superfamily PP4_RS24020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PP4_RS24025 PF06719 AraC-type transcriptional regulator N-terminus PP4_RS24025 PF12833 Helix-turn-helix domain PP4_RS24035 PF03466 LysR substrate binding domain PP4_RS24035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS24100 PF08482 ATP-dependent helicase C-terminal PP4_RS24100 PF00271 Helicase conserved C-terminal domain PP4_RS24100 PF04408 Helicase associated domain (HA2) PP4_RS24100 PF00270 DEAD/DEAH box helicase PP4_RS24125 PF08482 ATP-dependent helicase C-terminal PP4_RS24125 PF00271 Helicase conserved C-terminal domain PP4_RS24125 PF00270 DEAD/DEAH box helicase PP4_RS24125 PF04408 Helicase associated domain (HA2) PP4_RS24170 PF00069 Protein kinase domain PP4_RS24180 PF00580 UvrD/REP helicase N-terminal domain PP4_RS24180 PF13361 UvrD-like helicase C-terminal domain PP4_RS24200 PF13438 Domain of unknown function (DUF4113) PP4_RS24200 PF00817 impB/mucB/samB family PP4_RS24200 PF11799 impB/mucB/samB family C-terminal domain PP4_RS24205 PF17200 Single Cache domain 2 PP4_RS24205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS24205 PF00672 HAMP domain PP4_RS24215 PF00171 Aldehyde dehydrogenase family PP4_RS24220 PF01425 Amidase PP4_RS24225 PF00196 Bacterial regulatory proteins, luxR family PP4_RS24230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PP4_RS24230 PF00205 Thiamine pyrophosphate enzyme, central domain PP4_RS24230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PP4_RS24235 PF01070 FMN-dependent dehydrogenase PP4_RS24240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PP4_RS24240 PF13378 Enolase C-terminal domain-like PP4_RS24245 PF12833 Helix-turn-helix domain PP4_RS24245 PF14525 AraC-binding-like domain PP4_RS24250 PF03573 outer membrane porin, OprD family PP4_RS24255 PF07690 Major Facilitator Superfamily PP4_RS24260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS24260 PF03466 LysR substrate binding domain PP4_RS24265 PF00795 Carbon-nitrogen hydrolase PP4_RS24285 PF00106 short chain dehydrogenase PP4_RS24290 PF00175 Oxidoreductase NAD-binding domain PP4_RS24290 PF00970 Oxidoreductase FAD-binding domain PP4_RS24290 PF00111 2Fe-2S iron-sulfur cluster binding domain PP4_RS24295 PF00866 Ring hydroxylating beta subunit PP4_RS24300 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PP4_RS24300 PF00355 Rieske [2Fe-2S] domain PP4_RS24310 PF01425 Amidase PP4_RS24345 PF00270 DEAD/DEAH box helicase PP4_RS24345 PF04408 Helicase associated domain (HA2) PP4_RS24345 PF00271 Helicase conserved C-terminal domain PP4_RS24345 PF08482 ATP-dependent helicase C-terminal PP4_RS24365 PF06508 Queuosine biosynthesis protein QueC PP4_RS24375 PF07693 KAP family P-loop domain PP4_RS24390 PF00270 DEAD/DEAH box helicase PP4_RS24390 PF04408 Helicase associated domain (HA2) PP4_RS24390 PF00271 Helicase conserved C-terminal domain PP4_RS24390 PF08482 ATP-dependent helicase C-terminal PP4_RS24400 PF01545 Cation efflux family PP4_RS24400 PF16916 Dimerisation domain of Zinc Transporter PP4_RS24410 PF01037 Lrp/AsnC ligand binding domain PP4_RS24410 PF13404 AsnC-type helix-turn-helix domain PP4_RS24420 PF00849 RNA pseudouridylate synthase PP4_RS24425 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus PP4_RS24425 PF01048 Phosphorylase superfamily PP4_RS24430 PF18158 Adaptive response protein AidB N-terminal domain PP4_RS24430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS24430 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS24445 PF01627 Hpt domain PP4_RS24445 PF00072 Response regulator receiver domain PP4_RS24445 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS24445 PF00672 HAMP domain PP4_RS24445 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS24445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS24450 PF08543 Phosphomethylpyrimidine kinase PP4_RS24455 PF02581 Thiamine monophosphate synthase PP4_RS24460 PF00202 Aminotransferase class-III PP4_RS24475 PF02562 PhoH-like protein PP4_RS24480 PF02130 Uncharacterized protein family UPF0054 PP4_RS24485 PF03471 Transporter associated domain PP4_RS24485 PF00571 CBS domain PP4_RS24490 PF00795 Carbon-nitrogen hydrolase PP4_RS24505 PF13603 Leucyl-tRNA synthetase, Domain 2 PP4_RS24505 PF08264 Anticodon-binding domain of tRNA PP4_RS24505 PF09334 tRNA synthetases class I (M) PP4_RS24505 PF00133 tRNA synthetases class I (I, L, M and V) PP4_RS24525 PF13406 Transglycosylase SLT domain PP4_RS24530 PF02016 LD-carboxypeptidase N-terminal domain PP4_RS24530 PF17676 LD-carboxypeptidase C-terminal domain PP4_RS24535 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PP4_RS24535 PF04055 Radical SAM superfamily PP4_RS24540 PF03099 Biotin/lipoate A/B protein ligase family PP4_RS24545 PF04359 Protein of unknown function (DUF493) PP4_RS24550 PF00768 D-alanyl-D-alanine carboxypeptidase PP4_RS24550 PF07943 Penicillin-binding protein 5, C-terminal domain PP4_RS24555 PF03330 Lytic transglycolase PP4_RS24555 PF05036 Sporulation related domain PP4_RS24560 PF13406 Transglycosylase SLT domain PP4_RS24565 PF01098 Cell cycle protein PP4_RS24570 PF03717 Penicillin-binding Protein dimerisation domain PP4_RS24570 PF00905 Penicillin binding protein transpeptidase domain PP4_RS24575 PF02590 Predicted SPOUT methyltransferase PP4_RS24585 PF01467 Cytidylyltransferase-like PP4_RS24590 PF00171 Aldehyde dehydrogenase family PP4_RS24595 PF02245 Methylpurine-DNA glycosylase (MPG) PP4_RS24600 PF09335 SNARE associated Golgi protein PP4_RS24610 PF04172 LrgB-like family PP4_RS24620 PF01575 MaoC like domain PP4_RS24635 PF01207 Dihydrouridine synthase (Dus) PP4_RS24640 PF02954 Bacterial regulatory protein, Fis family PP4_RS24645 PF02142 MGS-like domain PP4_RS24645 PF01808 AICARFT/IMPCHase bienzyme PP4_RS24650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PP4_RS24650 PF02843 Phosphoribosylglycinamide synthetase, C domain PP4_RS24650 PF02844 Phosphoribosylglycinamide synthetase, N domain PP4_RS24655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PP4_RS24655 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS24655 PF00672 HAMP domain PP4_RS24655 PF00072 Response regulator receiver domain PP4_RS24655 PF01627 Hpt domain PP4_RS24655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS24660 PF01914 MarC family integral membrane protein PP4_RS24680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS24685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS24690 PF02570 Precorrin-8X methylmutase PP4_RS24695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PP4_RS24695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PP4_RS24700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PP4_RS24705 PF01888 CbiD PP4_RS24710 PF02571 Precorrin-6x reductase CbiJ/CobK PP4_RS24720 PF16200 C-terminal region of band_7 PP4_RS24720 PF01145 SPFH domain / Band 7 family PP4_RS24740 PF00593 TonB dependent receptor PP4_RS24740 PF07715 TonB-dependent Receptor Plug Domain PP4_RS24750 PF00324 Amino acid permease PP4_RS24755 PF13188 PAS domain PP4_RS24755 PF00158 Sigma-54 interaction domain PP4_RS24755 PF02954 Bacterial regulatory protein, Fis family PP4_RS24760 PF02653 Branched-chain amino acid transport system / permease component PP4_RS24770 PF12399 Branched-chain amino acid ATP-binding cassette transporter PP4_RS24770 PF00005 ABC transporter PP4_RS24775 PF00005 ABC transporter PP4_RS24790 PF00226 DnaJ domain PP4_RS24790 PF01556 DnaJ C terminal domain PP4_RS24795 PF00012 Hsp70 protein PP4_RS24805 PF07769 psiF repeat PP4_RS24815 PF00892 EamA-like transporter family PP4_RS24820 PF00561 alpha/beta hydrolase fold PP4_RS24835 PF05170 AsmA family PP4_RS24845 PF00440 Bacterial regulatory proteins, tetR family PP4_RS24855 PF00106 short chain dehydrogenase PP4_RS24860 PF00005 ABC transporter PP4_RS24865 PF00005 ABC transporter PP4_RS24865 PF12399 Branched-chain amino acid ATP-binding cassette transporter PP4_RS24870 PF02653 Branched-chain amino acid transport system / permease component PP4_RS24870 PF11862 Domain of unknown function (DUF3382) PP4_RS24875 PF02653 Branched-chain amino acid transport system / permease component PP4_RS24880 PF13458 Periplasmic binding protein PP4_RS24885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PP4_RS24885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PP4_RS24890 PF02540 NAD synthase PP4_RS24895 PF00127 Copper binding proteins, plastocyanin/azurin family PP4_RS24900 PF03641 Possible lysine decarboxylase PP4_RS24905 PF11842 Domain of unknown function (DUF3362) PP4_RS24905 PF04055 Radical SAM superfamily PP4_RS24905 PF08497 Radical SAM N-terminal PP4_RS24915 PF03796 DnaB-like helicase C terminal domain PP4_RS24915 PF00772 DnaB-like helicase N terminal domain PP4_RS24920 PF03948 Ribosomal protein L9, C-terminal domain PP4_RS24920 PF01281 Ribosomal protein L9, N-terminal domain PP4_RS24930 PF01084 Ribosomal protein S18 PP4_RS24935 PF01250 Ribosomal protein S6 PP4_RS24940 PF08032 RNA 2'-O ribose methyltransferase substrate binding PP4_RS24940 PF00588 SpoU rRNA Methylase family PP4_RS24945 PF00575 S1 RNA binding domain PP4_RS24945 PF00773 RNB domain PP4_RS24945 PF08206 Ribonuclease B OB domain PP4_RS24945 PF08461 Ribonuclease R winged-helix domain PP4_RS24945 PF17876 Cold shock domain PP4_RS24960 PF01547 Bacterial extracellular solute-binding protein PP4_RS24965 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS24975 PF00672 HAMP domain PP4_RS24975 PF02743 Cache domain PP4_RS24975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS24980 PF00709 Adenylosuccinate synthetase PP4_RS24985 PF13393 Histidyl-tRNA synthetase PP4_RS24990 PF01145 SPFH domain / Band 7 family PP4_RS24995 PF01145 SPFH domain / Band 7 family PP4_RS25000 PF01926 50S ribosome-binding GTPase PP4_RS25000 PF16360 GTP-binding GTPase Middle Region PP4_RS25000 PF13167 GTP-binding GTPase N-terminal PP4_RS25005 PF17209 Hfq protein PP4_RS25015 PF01119 DNA mismatch repair protein, C-terminal domain PP4_RS25015 PF08676 MutL C terminal dimerisation domain PP4_RS25020 PF11741 AMIN domain PP4_RS25020 PF01520 N-acetylmuramoyl-L-alanine amidase PP4_RS25025 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PP4_RS25030 PF01256 Carbohydrate kinase PP4_RS25030 PF03853 YjeF-related protein N-terminus PP4_RS25035 PF08331 Domain of unknown function (DUF1730) PP4_RS25040 PF03458 UPF0126 domain PP4_RS25045 PF00929 Exonuclease PP4_RS25050 PF03193 RsgA GTPase PP4_RS25055 PF13677 Membrane MotB of proton-channel complex MotA/MotB PP4_RS25055 PF00691 OmpA family PP4_RS25060 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS25070 PF00581 Rhodanese-like domain PP4_RS25075 PF02666 Phosphatidylserine decarboxylase PP4_RS25095 PF03989 DNA gyrase C-terminal domain, beta-propeller PP4_RS25095 PF00521 DNA gyrase/topoisomerase IV, subunit A PP4_RS25110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS25110 PF01751 Toprim domain PP4_RS25110 PF00986 DNA gyrase B subunit, carboxyl terminus PP4_RS25110 PF00204 DNA gyrase B PP4_RS25115 PF05728 Uncharacterised protein family (UPF0227) PP4_RS25120 PF00149 Calcineurin-like phosphoesterase PP4_RS25130 PF00293 NUDIX domain PP4_RS25145 PF13667 ThiC-associated domain PP4_RS25145 PF01964 Radical SAM ThiC family PP4_RS25150 PF02321 Outer membrane efflux protein PP4_RS25155 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PP4_RS25165 PF03466 LysR substrate binding domain PP4_RS25165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS25170 PF00893 Small Multidrug Resistance protein PP4_RS25175 PF01266 FAD dependent oxidoreductase PP4_RS25180 PF00248 Aldo/keto reductase family PP4_RS25190 PF01467 Cytidylyltransferase-like PP4_RS25190 PF00294 pfkB family carbohydrate kinase PP4_RS25195 PF00664 ABC transporter transmembrane region PP4_RS25195 PF00005 ABC transporter PP4_RS25210 PF13439 Glycosyltransferase Family 4 PP4_RS25210 PF00534 Glycosyl transferases group 1 PP4_RS25235 PF13439 Glycosyltransferase Family 4 PP4_RS25240 PF02543 Carbamoyltransferase N-terminus PP4_RS25240 PF16861 Carbamoyltransferase C-terminus PP4_RS25245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PP4_RS25250 PF00474 Sodium:solute symporter family PP4_RS25255 PF00171 Aldehyde dehydrogenase family PP4_RS25255 PF01619 Proline dehydrogenase PP4_RS25255 PF14850 DNA-binding domain of Proline dehydrogenase PP4_RS25255 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PP4_RS25270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PP4_RS25270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PP4_RS25270 PF12806 Acetyl-CoA dehydrogenase C-terminal like PP4_RS25270 PF02770 Acyl-CoA dehydrogenase, middle domain PP4_RS25280 PF01523 Putative modulator of DNA gyrase PP4_RS25285 PF07690 Major Facilitator Superfamily PP4_RS25290 PF03880 DbpA RNA binding domain PP4_RS25290 PF00271 Helicase conserved C-terminal domain PP4_RS25290 PF00270 DEAD/DEAH box helicase PP4_RS25300 PF12805 FUSC-like inner membrane protein yccS PP4_RS25305 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS25310 PF13673 Acetyltransferase (GNAT) domain PP4_RS25320 PF01863 Protein of unknown function DUF45 PP4_RS25325 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS25325 PF00563 EAL domain PP4_RS25325 PF03707 Bacterial signalling protein N terminal repeat PP4_RS25330 PF01116 Fructose-bisphosphate aldolase class-II PP4_RS25345 PF00162 Phosphoglycerate kinase PP4_RS25350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS25350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PP4_RS25355 PF02780 Transketolase, C-terminal domain PP4_RS25355 PF02779 Transketolase, pyrimidine binding domain PP4_RS25355 PF00456 Transketolase, thiamine diphosphate binding domain PP4_RS25360 PF01022 Bacterial regulatory protein, arsR family PP4_RS25365 PF00438 S-adenosylmethionine synthetase, N-terminal domain PP4_RS25365 PF02773 S-adenosylmethionine synthetase, C-terminal domain PP4_RS25365 PF02772 S-adenosylmethionine synthetase, central domain PP4_RS25370 PF01653 NAD-dependent DNA ligase adenylation domain PP4_RS25370 PF03120 NAD-dependent DNA ligase OB-fold domain PP4_RS25400 PF00999 Sodium/hydrogen exchanger family PP4_RS25410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PP4_RS25410 PF05221 S-adenosyl-L-homocysteine hydrolase PP4_RS25415 PF02219 Methylenetetrahydrofolate reductase PP4_RS25435 PF00270 DEAD/DEAH box helicase PP4_RS25435 PF00271 Helicase conserved C-terminal domain PP4_RS25440 PF04264 YceI-like domain PP4_RS25445 PF01292 Prokaryotic cytochrome b561 PP4_RS25450 PF01593 Flavin containing amine oxidoreductase PP4_RS25460 PF00202 Aminotransferase class-III PP4_RS25465 PF04452 RNA methyltransferase PP4_RS25470 PF03006 Haemolysin-III related PP4_RS25480 PF02895 Signal transducing histidine kinase, homodimeric domain PP4_RS25480 PF01584 CheW-like domain PP4_RS25480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS25480 PF02895 Signal transducing histidine kinase, homodimeric domain PP4_RS25480 PF01584 CheW-like domain PP4_RS25480 PF00072 Response regulator receiver domain PP4_RS25480 PF00072 Response regulator receiver domain PP4_RS25480 PF01627 Hpt domain PP4_RS25480 PF01627 Hpt domain PP4_RS25480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS25485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS25485 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PP4_RS25490 PF01584 CheW-like domain PP4_RS25495 PF00072 Response regulator receiver domain PP4_RS25500 PF00072 Response regulator receiver domain PP4_RS25505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PP4_RS25505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PP4_RS25515 PF02622 Uncharacterized ACR, COG1678 PP4_RS25520 PF03652 Holliday junction resolvase PP4_RS25525 PF00156 Phosphoribosyl transferase domain PP4_RS25530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PP4_RS25530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PP4_RS25535 PF01979 Amidohydrolase family PP4_RS25540 PF00227 Proteasome subunit PP4_RS25545 PF10431 C-terminal, D2-small domain, of ClpB protein PP4_RS25545 PF00004 ATPase family associated with various cellular activities (AAA) PP4_RS25545 PF07724 AAA domain (Cdc48 subfamily) PP4_RS25555 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PP4_RS25560 PF00561 alpha/beta hydrolase fold PP4_RS25565 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PP4_RS25595 PF01209 ubiE/COQ5 methyltransferase family PP4_RS25605 PF03109 ABC1 family PP4_RS25610 PF01502 Phosphoribosyl-AMP cyclohydrolase PP4_RS25615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PP4_RS25620 PF02416 mttA/Hcf106 family PP4_RS25625 PF02416 mttA/Hcf106 family PP4_RS25630 PF00902 Sec-independent protein translocase protein (TatC) PP4_RS25640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS25640 PF16591 Helical bimodular sensor domain PP4_RS25640 PF00672 HAMP domain PP4_RS25645 PF16591 Helical bimodular sensor domain PP4_RS25645 PF00672 HAMP domain PP4_RS25645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PP4_RS25650 PF00005 ABC transporter PP4_RS25655 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS25660 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS25665 PF00535 Glycosyl transferase family 2 PP4_RS25670 PF04349 Periplasmic glucan biosynthesis protein, MdoG PP4_RS25675 PF02580 D-Tyr-tRNA(Tyr) deacylase PP4_RS25680 PF00561 alpha/beta hydrolase fold PP4_RS25690 PF01979 Amidohydrolase family PP4_RS25695 PF00324 Amino acid permease PP4_RS25700 PF00221 Aromatic amino acid lyase PP4_RS25705 PF17391 Urocanase N-terminal domain PP4_RS25705 PF17392 Urocanase C-terminal domain PP4_RS25705 PF01175 Urocanase Rossmann-like domain PP4_RS25710 PF05962 HutD PP4_RS25715 PF00392 Bacterial regulatory proteins, gntR family PP4_RS25715 PF07702 UTRA domain PP4_RS25720 PF01979 Amidohydrolase family PP4_RS25725 PF08212 Lipocalin-like domain PP4_RS25740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PP4_RS25745 PF00343 Carbohydrate phosphorylase PP4_RS25755 PF00679 Elongation factor G C-terminus PP4_RS25755 PF00009 Elongation factor Tu GTP binding domain PP4_RS25755 PF03144 Elongation factor Tu domain 2 PP4_RS25760 PF02926 THUMP domain PP4_RS25760 PF02568 Thiamine biosynthesis protein (ThiI) PP4_RS25765 PF03951 Glutamine synthetase, beta-Grasp domain PP4_RS25765 PF00120 Glutamine synthetase, catalytic domain PP4_RS25770 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS25770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS25770 PF00989 PAS fold PP4_RS25775 PF00072 Response regulator receiver domain PP4_RS25775 PF00158 Sigma-54 interaction domain PP4_RS25775 PF02954 Bacterial regulatory protein, Fis family PP4_RS25785 PF00588 SpoU rRNA Methylase family PP4_RS25790 PF02556 Preprotein translocase subunit SecB PP4_RS25795 PF00462 Glutaredoxin PP4_RS25800 PF00581 Rhodanese-like domain PP4_RS25805 PF01676 Metalloenzyme superfamily PP4_RS25805 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PP4_RS25810 PF01551 Peptidase family M23 PP4_RS25815 PF13180 PDZ domain PP4_RS25815 PF03572 Peptidase family S41 PP4_RS25820 PF04748 Divergent polysaccharide deacetylase PP4_RS25825 PF02028 BCCT, betaine/carnitine/choline family transporter PP4_RS25830 PF00440 Bacterial regulatory proteins, tetR family PP4_RS25830 PF13977 BetI-type transcriptional repressor, C-terminal PP4_RS25835 PF00171 Aldehyde dehydrogenase family PP4_RS25840 PF00732 GMC oxidoreductase PP4_RS25840 PF05199 GMC oxidoreductase PP4_RS25850 PF02080 TrkA-C domain PP4_RS25850 PF00999 Sodium/hydrogen exchanger family PP4_RS25850 PF03471 Transporter associated domain PP4_RS25855 PF12795 Mechanosensitive ion channel porin domain PP4_RS25855 PF00924 Mechanosensitive ion channel PP4_RS25855 PF12794 Mechanosensitive ion channel inner membrane domain 1 PP4_RS25860 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PP4_RS25865 PF00085 Thioredoxin PP4_RS25880 PF13614 AAA domain PP4_RS25885 PF03466 LysR substrate binding domain PP4_RS25885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS25890 PF07690 Major Facilitator Superfamily PP4_RS25900 PF01208 Uroporphyrinogen decarboxylase (URO-D) PP4_RS25905 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS25905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PP4_RS25910 PF01645 Conserved region in glutamate synthase PP4_RS25910 PF01493 GXGXG motif PP4_RS25910 PF04898 Glutamate synthase central domain PP4_RS25910 PF00310 Glutamine amidotransferases class-II PP4_RS25920 PF01761 3-dehydroquinate synthase PP4_RS25925 PF01202 Shikimate kinase PP4_RS25930 PF00263 Bacterial type II and III secretion system protein PP4_RS25930 PF07660 Secretin and TonB N terminus short domain PP4_RS25930 PF03958 Bacterial type II/III secretion system short domain PP4_RS25930 PF11741 AMIN domain PP4_RS25945 PF11104 Type IV pilus assembly protein PilM; PP4_RS25950 PF00912 Transglycosylase PP4_RS25950 PF17092 Penicillin-binding protein OB-like domain PP4_RS25950 PF00905 Penicillin binding protein transpeptidase domain PP4_RS25955 PF03949 Malic enzyme, NAD binding domain PP4_RS25955 PF00390 Malic enzyme, N-terminal domain PP4_RS25965 PF01197 Ribosomal protein L31 PP4_RS25970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PP4_RS25970 PF00270 DEAD/DEAH box helicase PP4_RS25970 PF00271 Helicase conserved C-terminal domain PP4_RS25970 PF17764 3′ DNA-binding domain (3′BD) PP4_RS25970 PF18074 Primosomal protein N C-terminal domain PP4_RS25975 PF05746 DALR anticodon binding domain PP4_RS25975 PF03485 Arginyl tRNA synthetase N terminal domain PP4_RS25975 PF00750 tRNA synthetases class I (R) PP4_RS25990 PF00877 NlpC/P60 family PP4_RS25995 PF00437 Type II/IV secretion system protein PP4_RS26000 PF01168 Alanine racemase, N-terminal domain PP4_RS26005 PF03807 NADP oxidoreductase coenzyme F420-dependent PP4_RS26005 PF14748 Pyrroline-5-carboxylate reductase dimerisation PP4_RS26010 PF02325 YGGT family PP4_RS26015 PF00561 alpha/beta hydrolase fold PP4_RS26020 PF00561 alpha/beta hydrolase fold PP4_RS26020 PF07021 Methionine biosynthesis protein MetW PP4_RS26030 PF01725 Ham1 family PP4_RS26035 PF04055 Radical SAM superfamily PP4_RS26035 PF06969 HemN C-terminal domain PP4_RS26045 PF02390 Putative methyltransferase PP4_RS26050 PF05690 Thiazole biosynthesis protein ThiG PP4_RS26055 PF02597 ThiS family PP4_RS26055 PF05690 Thiazole biosynthesis protein ThiG PP4_RS26060 PF04241 Protein of unknown function (DUF423) PP4_RS26065 PF00912 Transglycosylase PP4_RS26070 PF04542 Sigma-70 region 2 PP4_RS26070 PF00140 Sigma-70 factor, region 1.2 PP4_RS26070 PF04545 Sigma-70, region 4 PP4_RS26075 PF18075 FtsX extracellular domain PP4_RS26080 PF00005 ABC transporter PP4_RS26085 PF02881 SRP54-type protein, helical bundle domain PP4_RS26085 PF00448 SRP54-type protein, GTPase domain PP4_RS26090 PF00675 Insulinase (Peptidase family M16) PP4_RS26090 PF05193 Peptidase M16 inactive domain PP4_RS26095 PF05193 Peptidase M16 inactive domain PP4_RS26110 PF00581 Rhodanese-like domain PP4_RS26120 PF00171 Aldehyde dehydrogenase family PP4_RS26130 PF05199 GMC oxidoreductase PP4_RS26130 PF00732 GMC oxidoreductase PP4_RS26135 PF01467 Cytidylyltransferase-like PP4_RS26140 PF00037 4Fe-4S binding domain PP4_RS26145 PF06827 Zinc finger found in FPG and IleRS PP4_RS26145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PP4_RS26145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PP4_RS26155 PF17785 PUA-like domain PP4_RS26155 PF10672 S-adenosylmethionine-dependent methyltransferase PP4_RS26160 PF00920 Dehydratase family PP4_RS26170 PF00375 Sodium:dicarboxylate symporter family PP4_RS26175 PF00186 Dihydrofolate reductase PP4_RS26185 PF01926 50S ribosome-binding GTPase PP4_RS26185 PF10396 GTP-binding protein TrmE N-terminus PP4_RS26185 PF12631 MnmE helical domain PP4_RS26190 PF01966 HD domain PP4_RS26200 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26205 PF08402 TOBE domain PP4_RS26205 PF00005 ABC transporter PP4_RS26215 PF03466 LysR substrate binding domain PP4_RS26215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS26220 PF00403 Heavy-metal-associated domain PP4_RS26225 PF13411 MerR HTH family regulatory protein PP4_RS26230 PF00303 Thymidylate synthase PP4_RS26235 PF01790 Prolipoprotein diacylglyceryl transferase PP4_RS26240 PF01925 Sulfite exporter TauE/SafE PP4_RS26250 PF05524 PEP-utilising enzyme, N-terminal PP4_RS26250 PF00391 PEP-utilising enzyme, mobile domain PP4_RS26250 PF01590 GAF domain PP4_RS26250 PF02896 PEP-utilising enzyme, TIM barrel domain PP4_RS26255 PF00293 NUDIX domain PP4_RS26270 PF00291 Pyridoxal-phosphate dependent enzyme PP4_RS26270 PF00585 C-terminal regulatory domain of Threonine dehydratase PP4_RS26275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PP4_RS26280 PF06977 SdiA-regulated PP4_RS26285 PF06977 SdiA-regulated PP4_RS26290 PF01557 Fumarylacetoacetate (FAA) hydrolase family PP4_RS26295 PF01565 FAD binding domain PP4_RS26295 PF02913 FAD linked oxidases, C-terminal domain PP4_RS26300 PF01842 ACT domain PP4_RS26300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PP4_RS26300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PP4_RS26310 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS26315 PF04463 Protein of unknown function (DUF523) PP4_RS26340 PF12464 Maltose acetyltransferase PP4_RS26340 PF14602 Hexapeptide repeat of succinyl-transferase PP4_RS26345 PF01804 Penicillin amidase PP4_RS26350 PF00497 Bacterial extracellular solute-binding proteins, family 3 PP4_RS26355 PF00005 ABC transporter PP4_RS26360 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26365 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26370 PF03180 NLPA lipoprotein PP4_RS26375 PF00158 Sigma-54 interaction domain PP4_RS26385 PF02472 Biopolymer transport protein ExbD/TolR PP4_RS26390 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS26395 PF03544 Gram-negative bacterial TonB protein C-terminal PP4_RS26400 PF12857 TOBE-like domain PP4_RS26400 PF00005 ABC transporter PP4_RS26405 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26410 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26425 PF00873 AcrB/AcrD/AcrF family PP4_RS26430 PF13533 Biotin-lipoyl like PP4_RS26450 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26455 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26460 PF00005 ABC transporter PP4_RS26460 PF08402 TOBE domain PP4_RS26465 PF13416 Bacterial extracellular solute-binding protein PP4_RS26470 PF13416 Bacterial extracellular solute-binding protein PP4_RS26475 PF00202 Aminotransferase class-III PP4_RS26480 PF00120 Glutamine synthetase, catalytic domain PP4_RS26485 PF00120 Glutamine synthetase, catalytic domain PP4_RS26490 PF00696 Amino acid kinase family PP4_RS26490 PF00583 Acetyltransferase (GNAT) family PP4_RS26495 PF01546 Peptidase family M20/M25/M40 PP4_RS26495 PF07687 Peptidase dimerisation domain PP4_RS26505 PF01037 Lrp/AsnC ligand binding domain PP4_RS26505 PF13404 AsnC-type helix-turn-helix domain PP4_RS26515 PF00437 Type II/IV secretion system protein PP4_RS26525 PF02347 Glycine cleavage system P-protein PP4_RS26530 PF01597 Glycine cleavage H-protein PP4_RS26535 PF01571 Aminomethyltransferase folate-binding domain PP4_RS26535 PF08669 Glycine cleavage T-protein C-terminal barrel domain PP4_RS26540 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS26550 PF01494 FAD binding domain PP4_RS26560 PF01494 FAD binding domain PP4_RS26565 PF00557 Metallopeptidase family M24 PP4_RS26565 PF05195 Aminopeptidase P, N-terminal domain PP4_RS26570 PF03695 Uncharacterised protein family (UPF0149) PP4_RS26580 PF05164 Cell division protein ZapA PP4_RS26585 PF01812 5-formyltetrahydrofolate cyclo-ligase family PP4_RS26595 PF13533 Biotin-lipoyl like PP4_RS26600 PF00005 ABC transporter PP4_RS26615 PF08240 Alcohol dehydrogenase GroES-like domain PP4_RS26615 PF00107 Zinc-binding dehydrogenase PP4_RS26625 PF00175 Oxidoreductase NAD-binding domain PP4_RS26630 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PP4_RS26640 PF05973 Phage derived protein Gp49-like (DUF891) PP4_RS26645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PP4_RS26645 PF07498 Rho termination factor, N-terminal domain PP4_RS26645 PF07497 Rho termination factor, RNA-binding domain PP4_RS26650 PF00085 Thioredoxin PP4_RS26655 PF02541 Ppx/GppA phosphatase family PP4_RS26660 PF13089 Polyphosphate kinase N-terminal domain PP4_RS26660 PF02503 Polyphosphate kinase middle domain PP4_RS26660 PF13090 Polyphosphate kinase C-terminal domain 2 PP4_RS26660 PF17941 Polyphosphate kinase C-terminal domain 1 PP4_RS26670 PF04116 Fatty acid hydroxylase superfamily PP4_RS26680 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PP4_RS26685 PF12633 Adenylate cyclase NT domain PP4_RS26685 PF01295 Adenylate cyclase, class-I PP4_RS26690 PF01272 Transcription elongation factor, GreA/GreB, C-term PP4_RS26690 PF14760 Rnk N-terminus PP4_RS26700 PF01491 Frataxin-like domain PP4_RS26710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PP4_RS26710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PP4_RS26715 PF01678 Diaminopimelate epimerase PP4_RS26725 PF00589 Phage integrase family PP4_RS26725 PF02899 Phage integrase, N-terminal SAM-like domain PP4_RS26730 PF13419 Haloacid dehalogenase-like hydrolase PP4_RS26740 PF00909 Ammonium Transporter Family PP4_RS26745 PF00543 Nitrogen regulatory protein P-II PP4_RS26750 PF04380 Membrane fusogenic activity PP4_RS26755 PF03459 TOBE domain PP4_RS26755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS26765 PF13335 Magnesium chelatase, subunit ChlI C-terminal PP4_RS26765 PF01078 Magnesium chelatase, subunit ChlI PP4_RS26770 PF00999 Sodium/hydrogen exchanger family PP4_RS26770 PF02254 TrkA-N domain PP4_RS26780 PF00857 Isochorismatase family PP4_RS26785 PF03466 LysR substrate binding domain PP4_RS26785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS26790 PF07969 Amidohydrolase family PP4_RS26800 PF00857 Isochorismatase family PP4_RS26810 PF01266 FAD dependent oxidoreductase PP4_RS26815 PF00171 Aldehyde dehydrogenase family PP4_RS26820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS26820 PF03466 LysR substrate binding domain PP4_RS26825 PF07063 Domain of unknown function (DUF1338) PP4_RS26830 PF03466 LysR substrate binding domain PP4_RS26830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS26835 PF01554 MatE PP4_RS26840 PF03707 Bacterial signalling protein N terminal repeat PP4_RS26840 PF00563 EAL domain PP4_RS26840 PF00990 Diguanylate cyclase, GGDEF domain PP4_RS26845 PF13361 UvrD-like helicase C-terminal domain PP4_RS26845 PF00580 UvrD/REP helicase N-terminal domain PP4_RS26855 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PP4_RS26855 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PP4_RS26860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PP4_RS26870 PF00842 Alanine racemase, C-terminal domain PP4_RS26870 PF01168 Alanine racemase, N-terminal domain PP4_RS26875 PF01266 FAD dependent oxidoreductase PP4_RS26880 PF01037 Lrp/AsnC ligand binding domain PP4_RS26890 PF01266 FAD dependent oxidoreductase PP4_RS26900 PF00392 Bacterial regulatory proteins, gntR family PP4_RS26900 PF00155 Aminotransferase class I and II PP4_RS26905 PF13091 PLD-like domain PP4_RS26915 PF00171 Aldehyde dehydrogenase family PP4_RS26925 PF00471 Ribosomal protein L33 PP4_RS26930 PF00830 Ribosomal L28 family PP4_RS26935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PP4_RS26940 PF04002 RadC-like JAB domain PP4_RS26945 PF04127 DNA / pantothenate metabolism flavoprotein PP4_RS26945 PF02441 Flavoprotein PP4_RS26950 PF00692 dUTPase PP4_RS26955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PP4_RS26955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PP4_RS26955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PP4_RS26955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PP4_RS26960 PF00696 Amino acid kinase family PP4_RS26965 PF00156 Phosphoribosyl transferase domain PP4_RS26970 PF03372 Endonuclease/Exonuclease/phosphatase family PP4_RS26975 PF01138 3' exoribonuclease family, domain 1 PP4_RS26975 PF03725 3' exoribonuclease family, domain 2 PP4_RS26980 PF08340 Domain of unknown function (DUF1732) PP4_RS26980 PF03755 YicC-like family, N-terminal region PP4_RS26985 PF00625 Guanylate kinase PP4_RS26995 PF07722 Peptidase C26 PP4_RS27000 PF00120 Glutamine synthetase, catalytic domain PP4_RS27005 PF03466 LysR substrate binding domain PP4_RS27005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS27010 PF01192 RNA polymerase Rpb6 PP4_RS27015 PF04607 Region found in RelA / SpoT proteins PP4_RS27015 PF13291 ACT domain PP4_RS27015 PF02824 TGS domain PP4_RS27020 PF01042 Endoribonuclease L-PSP PP4_RS27035 PF01618 MotA/TolQ/ExbB proton channel family PP4_RS27040 PF02472 Biopolymer transport protein ExbD/TolR PP4_RS27045 PF03544 Gram-negative bacterial TonB protein C-terminal PP4_RS27050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS27050 PF03466 LysR substrate binding domain PP4_RS27055 PF17191 RecG wedge domain PP4_RS27055 PF00271 Helicase conserved C-terminal domain PP4_RS27055 PF00270 DEAD/DEAH box helicase PP4_RS27070 PF00216 Bacterial DNA-binding protein PP4_RS27075 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS27075 PF18113 Rubredoxin binding C-terminal domain PP4_RS27080 PF00301 Rubredoxin PP4_RS27085 PF04345 Chorismate lyase PP4_RS27090 PF01040 UbiA prenyltransferase family PP4_RS27105 PF00072 Response regulator receiver domain PP4_RS27105 PF00486 Transcriptional regulatory protein, C terminal PP4_RS27110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP4_RS27110 PF00512 His Kinase A (phospho-acceptor) domain PP4_RS27110 PF00989 PAS fold PP4_RS27110 PF11808 Phosphate regulon sensor protein PhoR PP4_RS27115 PF01595 Cyclin M transmembrane N-terminal domain PP4_RS27115 PF03471 Transporter associated domain PP4_RS27115 PF00571 CBS domain PP4_RS27120 PF01551 Peptidase family M23 PP4_RS27120 PF08525 Opacity-associated protein A N-terminal motif PP4_RS27120 PF01476 LysM domain PP4_RS27125 PF00072 Response regulator receiver domain PP4_RS27130 PF01895 PhoU domain PP4_RS27135 PF00005 ABC transporter PP4_RS27140 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS27145 PF00528 Binding-protein-dependent transport system inner membrane component PP4_RS27150 PF12849 PBP superfamily domain PP4_RS27155 PF07690 Major Facilitator Superfamily PP4_RS27160 PF03061 Thioesterase superfamily PP4_RS27180 PF02222 ATP-grasp domain PP4_RS27180 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PP4_RS27185 PF00731 AIR carboxylase PP4_RS27190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS27190 PF03466 LysR substrate binding domain PP4_RS27195 PF00206 Lyase PP4_RS27195 PF10415 Fumarase C C-terminus PP4_RS27200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PP4_RS27200 PF12833 Helix-turn-helix domain PP4_RS27205 PF00850 Histone deacetylase domain PP4_RS27210 PF13416 Bacterial extracellular solute-binding protein PP4_RS27215 PF00155 Aminotransferase class I and II PP4_RS27215 PF00392 Bacterial regulatory proteins, gntR family PP4_RS27235 PF02436 Conserved carboxylase domain PP4_RS27235 PF00682 HMGL-like PP4_RS27235 PF00364 Biotin-requiring enzyme PP4_RS27240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PP4_RS27240 PF00289 Biotin carboxylase, N-terminal domain PP4_RS27240 PF02785 Biotin carboxylase C-terminal domain PP4_RS27245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PP4_RS27245 PF03466 LysR substrate binding domain PP4_RS27250 PF01418 Helix-turn-helix domain, rpiR family PP4_RS27250 PF01380 SIS domain PP4_RS27255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PP4_RS27255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PP4_RS27265 PF13361 UvrD-like helicase C-terminal domain PP4_RS27265 PF00580 UvrD/REP helicase N-terminal domain PP4_RS27280 PF02254 TrkA-N domain PP4_RS27280 PF00999 Sodium/hydrogen exchanger family PP4_RS27290 PF03061 Thioesterase superfamily PP4_RS27295 PF08543 Phosphomethylpyrimidine kinase PP4_RS27305 PF07683 Cobalamin synthesis protein cobW C-terminal domain PP4_RS27305 PF02492 CobW/HypB/UreG, nucleotide-binding domain PP4_RS27315 PF02492 CobW/HypB/UreG, nucleotide-binding domain PP4_RS27315 PF07683 Cobalamin synthesis protein cobW C-terminal domain PP4_RS27325 PF02649 Type I GTP cyclohydrolase folE2 PP4_RS27330 PF12276 Protein of unknown function (DUF3617) PP4_RS27335 PF13091 PLD-like domain PP4_RS27335 PF13396 Phospholipase_D-nuclease N-terminal PP4_RS27345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PP4_RS27345 PF07992 Pyridine nucleotide-disulphide oxidoreductase PP4_RS27350 PF01380 SIS domain PP4_RS27355 PF00455 DeoR C terminal sensor domain PP4_RS27355 PF08220 DeoR-like helix-turn-helix domain PP4_RS27360 PF00132 Bacterial transferase hexapeptide (six repeats) PP4_RS27360 PF12804 MobA-like NTP transferase domain PP4_RS27365 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PP4_RS27365 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PP4_RS27370 PF02874 ATP synthase alpha/beta family, beta-barrel domain PP4_RS27370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PP4_RS27375 PF00231 ATP synthase PP4_RS27380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PP4_RS27380 PF00306 ATP synthase alpha/beta chain, C terminal domain PP4_RS27380 PF02874 ATP synthase alpha/beta family, beta-barrel domain PP4_RS27385 PF00213 ATP synthase delta (OSCP) subunit PP4_RS27390 PF00430 ATP synthase B/B' CF(0) PP4_RS27395 PF00137 ATP synthase subunit C PP4_RS27400 PF00119 ATP synthase A chain PP4_RS27405 PF03899 ATP synthase I chain PP4_RS27410 PF17762 HTH domain found in ParB protein PP4_RS27410 PF02195 ParB-like nuclease domain PP4_RS27415 PF13614 AAA domain PP4_RS27420 PF02527 rRNA small subunit methyltransferase G PP4_RS27425 PF13932 GidA associated domain PP4_RS27425 PF01134 Glucose inhibited division protein A PP4_RS27430 PF01926 50S ribosome-binding GTPase PP4_RS27430 PF12631 MnmE helical domain PP4_RS27430 PF10396 GTP-binding protein TrmE N-terminus PP4_RS27435 PF14849 YidC periplasmic domain PP4_RS27435 PF02096 60Kd inner membrane protein PP4_RS27475 PF00501 AMP-binding enzyme PP4_RS27475 PF13193 AMP-binding enzyme C-terminal domain PP4_RS27475 PF00668 Condensation domain PP4_RS27475 PF00550 Phosphopantetheine attachment site PP4_RS27535 PF13627 Prokaryotic lipoprotein-attachment site