PP4_RS00005 SM00382 ATPases associated with a variety of cellular activities PP4_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain PP4_RS00010 SM00480 DNA polymerase III beta subunit PP4_RS00020 SM00387 Histidine kinase-like ATPases PP4_RS00020 SM00433 TopoisomeraseII PP4_RS00035 SM00382 ATPases associated with a variety of cellular activities PP4_RS00105 SM00448 cheY-homologous receiver domain PP4_RS00105 SM00862 Transcriptional regulatory protein, C terminal PP4_RS00110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS00110 SM00387 Histidine kinase-like ATPases PP4_RS00110 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS00185 SM00448 cheY-homologous receiver domain PP4_RS00185 SM00862 Transcriptional regulatory protein, C terminal PP4_RS00210 SM00382 ATPases associated with a variety of cellular activities PP4_RS00215 SM00849 Metallo-beta-lactamase superfamily PP4_RS00245 SM00563 Phosphate acyltransferases PP4_RS00275 SM00028 Tetratricopeptide repeats PP4_RS00315 SM00829 Enoylreductase PP4_RS00445 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS00450 SM00947 Carbonic anhydrase PP4_RS00525 SM00382 ATPases associated with a variety of cellular activities PP4_RS00525 SM00930 PP4_RS00525 PP4_RS00530 SM01060 PP4_RS00530 PP4_RS00545 SM00382 ATPases associated with a variety of cellular activities PP4_RS00570 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs PP4_RS00570 SM00474 3'-5' exonuclease PP4_RS00570 SM00475 5'-3' exonuclease PP4_RS00570 SM00482 DNA polymerase A domain PP4_RS00600 SM00267 diguanylate cyclase PP4_RS00605 SM00644 PP4_RS00605 PP4_RS00610 SM00052 Putative diguanylate phosphodiesterase PP4_RS00615 SM00091 PAS domain PP4_RS00615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS00615 SM00387 Histidine kinase-like ATPases PP4_RS00615 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS00620 SM00382 ATPases associated with a variety of cellular activities PP4_RS00620 SM00448 cheY-homologous receiver domain PP4_RS00625 SM00749 bacterial OsmY and nodulation domain PP4_RS00665 SM00382 ATPases associated with a variety of cellular activities PP4_RS00745 SM01002 Alanine dehydrogenase/PNT, C-terminal domain PP4_RS00745 SM01003 Alanine dehydrogenase/PNT, N-terminal domain PP4_RS00810 SM00965 Secretin and TonB N terminus short domain PP4_RS00825 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS00825 SM00895 PP4_RS00825 PP4_RS00835 SM00052 Putative diguanylate phosphodiesterase PP4_RS00835 SM00267 diguanylate cyclase PP4_RS00835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS00845 SM00382 ATPases associated with a variety of cellular activities PP4_RS00850 SM00327 von Willebrand factor (vWF) type A domain PP4_RS00870 SM00382 ATPases associated with a variety of cellular activities PP4_RS00885 SM00671 Sel1-like repeats. PP4_RS00890 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS00945 SM00448 cheY-homologous receiver domain PP4_RS00945 SM00850 LytTr DNA-binding domain PP4_RS00995 SM00382 ATPases associated with a variety of cellular activities PP4_RS01010 SM00244 prohibitin homologues PP4_RS01035 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS01040 SM00327 von Willebrand factor (vWF) type A domain PP4_RS01070 SM00382 ATPases associated with a variety of cellular activities PP4_RS01110 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS01110 SM00866 PP4_RS01110 PP4_RS01135 SM00382 ATPases associated with a variety of cellular activities PP4_RS01140 SM00567 E-Z type HEAT repeats PP4_RS01150 SM00382 ATPases associated with a variety of cellular activities PP4_RS01195 SM00448 cheY-homologous receiver domain PP4_RS01200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS01200 SM00091 PAS domain PP4_RS01200 SM00267 diguanylate cyclase PP4_RS01215 SM00052 Putative diguanylate phosphodiesterase PP4_RS01215 SM00091 PAS domain PP4_RS01215 SM00267 diguanylate cyclase PP4_RS01225 SM00382 ATPases associated with a variety of cellular activities PP4_RS01225 SM00930 PP4_RS01225 PP4_RS01250 SM00382 ATPases associated with a variety of cellular activities PP4_RS01260 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS01260 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. PP4_RS01285 SM00382 ATPases associated with a variety of cellular activities PP4_RS01290 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS01310 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS01325 SM00382 ATPases associated with a variety of cellular activities PP4_RS01350 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS01350 SM00732 Likely ribonuclease with RNase H fold. PP4_RS01355 SM00448 cheY-homologous receiver domain PP4_RS01355 SM00862 Transcriptional regulatory protein, C terminal PP4_RS01360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS01360 SM00387 Histidine kinase-like ATPases PP4_RS01360 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS01375 SM00363 S4 RNA-binding domain PP4_RS01425 SM00257 Lysin motif PP4_RS01450 SM00382 ATPases associated with a variety of cellular activities PP4_RS01450 SM00448 cheY-homologous receiver domain PP4_RS01455 SM00387 Histidine kinase-like ATPases PP4_RS01455 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS01490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS01490 SM00387 Histidine kinase-like ATPases PP4_RS01490 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS01495 SM00448 cheY-homologous receiver domain PP4_RS01495 SM00862 Transcriptional regulatory protein, C terminal PP4_RS01505 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS01560 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS01565 SM00382 ATPases associated with a variety of cellular activities PP4_RS01595 SM00478 endonuclease III PP4_RS01635 SM00382 ATPases associated with a variety of cellular activities PP4_RS01655 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS01695 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS01710 SM00989 PP4_RS01710 PP4_RS01725 SM00893 Electron transfer flavoprotein domain PP4_RS01730 SM00893 Electron transfer flavoprotein domain PP4_RS01750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS01750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS01765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS01765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS01825 SM00563 Phosphate acyltransferases PP4_RS01840 SM00448 cheY-homologous receiver domain PP4_RS01840 SM00862 Transcriptional regulatory protein, C terminal PP4_RS01845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS01845 SM00387 Histidine kinase-like ATPases PP4_RS01845 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS01865 SM00052 Putative diguanylate phosphodiesterase PP4_RS01865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS01865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS01865 SM00091 PAS domain PP4_RS01865 SM00267 diguanylate cyclase PP4_RS01935 SM00965 Secretin and TonB N terminus short domain PP4_RS01950 SM00479 PP4_RS01950 PP4_RS01955 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS01960 SM00448 cheY-homologous receiver domain PP4_RS01995 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS01995 SM00876 Biotin and Thiamin Synthesis associated domain PP4_RS02030 SM00267 diguanylate cyclase PP4_RS02060 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS02105 SM00344 helix_turn_helix ASNC type PP4_RS02125 SM00052 Putative diguanylate phosphodiesterase PP4_RS02125 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS02125 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS02125 SM00091 PAS domain PP4_RS02125 SM00267 diguanylate cyclase PP4_RS02135 SM00400 zinc finger PP4_RS02135 SM00493 PP4_RS02135 PP4_RS02135 SM00766 DNA primase DnaG DnaB-binding PP4_RS02150 SM01207 PP4_RS02150 PP4_RS02155 SM00905 Dihydroneopterin aldolase PP4_RS02180 SM00763 PrkA AAA domain PP4_RS02185 SM00450 Rhodanese Homology Domain PP4_RS02200 SM00650 Ribosomal RNA adenine dimethylases PP4_RS02230 SM00271 DnaJ molecular chaperone homology domain PP4_RS02240 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS02240 SM00091 PAS domain PP4_RS02240 SM00387 Histidine kinase-like ATPases PP4_RS02245 SM00421 helix_turn_helix, Lux Regulon PP4_RS02245 SM00448 cheY-homologous receiver domain PP4_RS02250 SM00382 ATPases associated with a variety of cellular activities PP4_RS02285 SM00869 Autotransporter beta-domain PP4_RS02310 SM00100 Cyclic nucleotide-monophosphate binding domain PP4_RS02310 SM00419 helix_turn_helix, cAMP Regulatory protein PP4_RS02335 SM00822 PP4_RS02335 PP4_RS02350 SM00859 Semialdehyde dehydrogenase, NAD binding domain PP4_RS02445 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. PP4_RS02445 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. PP4_RS02450 SM00649 Ribosomal protein L11/L12 PP4_RS02475 SM00663 RNA polymerase I subunit A N-terminus PP4_RS02490 SM00838 Elongation factor G C-terminus PP4_RS02490 SM00889 Elongation factor G, domain IV PP4_RS02500 SM01403 PP4_RS02500 PP4_RS02520 SM01382 PP4_RS02520 PP4_RS02520 SM01383 PP4_RS02520 PP4_RS02535 SM00322 K homology RNA-binding domain PP4_RS02555 SM01374 PP4_RS02555 PP4_RS02560 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. PP4_RS02625 SM00363 S4 RNA-binding domain PP4_RS02625 SM01390 PP4_RS02625 PP4_RS02630 SM00662 RNA polymerases D PP4_RS02640 SM01060 PP4_RS02640 PP4_RS02665 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS02685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS02725 SM00870 PP4_RS02725 PP4_RS02790 SM00382 ATPases associated with a variety of cellular activities PP4_RS02890 SM00861 Transketolase, pyrimidine binding domain PP4_RS02925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS02925 SM00387 Histidine kinase-like ATPases PP4_RS02925 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS02930 SM00448 cheY-homologous receiver domain PP4_RS02930 SM00862 Transcriptional regulatory protein, C terminal PP4_RS02965 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS03005 SM00028 Tetratricopeptide repeats PP4_RS03025 SM00327 von Willebrand factor (vWF) type A domain PP4_RS03030 SM00028 Tetratricopeptide repeats PP4_RS03030 SM00327 von Willebrand factor (vWF) type A domain PP4_RS03095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS03095 SM00091 PAS domain PP4_RS03095 SM00267 diguanylate cyclase PP4_RS03115 SM00965 Secretin and TonB N terminus short domain PP4_RS03165 SM00382 ATPases associated with a variety of cellular activities PP4_RS03190 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. PP4_RS03195 SM00829 Enoylreductase PP4_RS03205 SM00861 Transketolase, pyrimidine binding domain PP4_RS03220 SM00382 ATPases associated with a variety of cellular activities PP4_RS03225 SM00878 Biotin carboxylase C-terminal domain PP4_RS03245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS03250 SM00267 diguanylate cyclase PP4_RS03250 SM00448 cheY-homologous receiver domain PP4_RS03275 SM01321 PP4_RS03275 PP4_RS03285 SM01359 PP4_RS03285 PP4_RS03285 SM01360 PP4_RS03285 PP4_RS03305 SM00421 helix_turn_helix, Lux Regulon PP4_RS03305 SM00448 cheY-homologous receiver domain PP4_RS03340 SM00822 PP4_RS03340 PP4_RS03350 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS03355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS03355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS03360 SM00422 helix_turn_helix, mercury resistance PP4_RS03385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PP4_RS03460 SM00267 diguanylate cyclase PP4_RS03510 SM00563 Phosphate acyltransferases PP4_RS03520 SM00195 Dual specificity phosphatase, catalytic domain PP4_RS03570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS03570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS03570 SM01358 PP4_RS03570 PP4_RS03635 SM00421 helix_turn_helix, Lux Regulon PP4_RS03650 SM00382 ATPases associated with a variety of cellular activities PP4_RS03675 SM00833 Cobalamin synthesis protein cobW C-terminal domain PP4_RS03735 SM00422 helix_turn_helix, mercury resistance PP4_RS03745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS03745 SM00091 PAS domain PP4_RS03775 SM00822 PP4_RS03775 PP4_RS03780 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS03805 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PP4_RS03830 SM00091 PAS domain PP4_RS03830 SM00387 Histidine kinase-like ATPases PP4_RS03830 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS03850 SM00028 Tetratricopeptide repeats PP4_RS03880 SM00858 PP4_RS03880 PP4_RS03890 SM00448 cheY-homologous receiver domain PP4_RS03900 SM00965 Secretin and TonB N terminus short domain PP4_RS03940 SM00965 Secretin and TonB N terminus short domain PP4_RS03945 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS03990 SM00966 SpoVT / AbrB like domain PP4_RS04020 SM00822 PP4_RS04020 PP4_RS04060 SM00710 Parallel beta-helix repeats PP4_RS04060 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses PP4_RS04070 SM00671 Sel1-like repeats. PP4_RS04085 SM00984 UDP binding domain PP4_RS04100 SM00670 Large family of predicted nucleotide-binding domains PP4_RS04120 SM00487 DEAD-like helicases superfamily PP4_RS04120 SM00490 helicase superfamily c-terminal domain PP4_RS04130 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS04145 SM00382 ATPases associated with a variety of cellular activities PP4_RS04150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PP4_RS04170 SM00344 helix_turn_helix ASNC type PP4_RS04200 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS04250 SM00749 bacterial OsmY and nodulation domain PP4_RS04345 SM00864 Tubulin/FtsZ family, GTPase domain PP4_RS04345 SM00865 Tubulin/FtsZ family, C-terminal domain PP4_RS04360 SM00957 SecA DEAD-like domain PP4_RS04360 SM00958 SecA preprotein cross-linking domain PP4_RS04385 SM00091 PAS domain PP4_RS04385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS04385 SM00387 Histidine kinase-like ATPases PP4_RS04385 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS04435 SM00883 Chaperonin 10 Kd subunit PP4_RS04450 SM00448 cheY-homologous receiver domain PP4_RS04450 SM00862 Transcriptional regulatory protein, C terminal PP4_RS04455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS04455 SM00387 Histidine kinase-like ATPases PP4_RS04455 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS04515 SM00052 Putative diguanylate phosphodiesterase PP4_RS04515 SM00267 diguanylate cyclase PP4_RS04555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PP4_RS04565 SM00563 Phosphate acyltransferases PP4_RS04590 SM00867 YceI-like domain PP4_RS04595 SM00155 Phospholipase D. Active site motifs. PP4_RS04675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS04675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS04695 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS04715 SM00998 Adenylosuccinate lyase C-terminus PP4_RS04780 SM00849 Metallo-beta-lactamase superfamily PP4_RS04800 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS04815 SM00903 Flavin reductase like domain PP4_RS04840 SM00382 ATPases associated with a variety of cellular activities PP4_RS04840 SM00448 cheY-homologous receiver domain PP4_RS04845 SM00387 Histidine kinase-like ATPases PP4_RS04845 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS04850 SM01217 PP4_RS04850 PP4_RS04885 SM00363 S4 RNA-binding domain PP4_RS04890 SM00267 diguanylate cyclase PP4_RS04905 SM00986 Uracil DNA glycosylase superfamily PP4_RS04905 SM00987 UreE urease accessory protein, C-terminal domain PP4_RS04935 SM00448 cheY-homologous receiver domain PP4_RS04935 SM00862 Transcriptional regulatory protein, C terminal PP4_RS04940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS04940 SM00387 Histidine kinase-like ATPases PP4_RS04940 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS04985 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PP4_RS05000 SM00358 Double-stranded RNA binding motif PP4_RS05000 SM00535 Ribonuclease III family PP4_RS05020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS05020 SM00387 Histidine kinase-like ATPases PP4_RS05020 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS05025 SM00448 cheY-homologous receiver domain PP4_RS05025 SM00862 Transcriptional regulatory protein, C terminal PP4_RS05050 SM00382 ATPases associated with a variety of cellular activities PP4_RS05050 SM00464 Found in ATP-dependent protease La (LON) PP4_RS05055 SM00564 beta-propeller repeat PP4_RS05105 SM00487 DEAD-like helicases superfamily PP4_RS05105 SM00490 helicase superfamily c-terminal domain PP4_RS05130 SM00382 ATPases associated with a variety of cellular activities PP4_RS05130 SM00448 cheY-homologous receiver domain PP4_RS05135 SM00387 Histidine kinase-like ATPases PP4_RS05135 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS05140 SM00382 ATPases associated with a variety of cellular activities PP4_RS05155 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS05160 SM00369 Leucine-rich repeats, typical (most populated) subfamily PP4_RS05170 SM00420 helix_turn_helix, Deoxyribose operon repressor PP4_RS05170 SM01134 PP4_RS05170 PP4_RS05190 SM00382 ATPases associated with a variety of cellular activities PP4_RS05200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS05230 SM00479 PP4_RS05230 PP4_RS05255 SM00421 helix_turn_helix, Lux Regulon PP4_RS05255 SM00448 cheY-homologous receiver domain PP4_RS05265 SM00478 endonuclease III PP4_RS05265 SM00525 PP4_RS05265 PP4_RS05275 SM00900 PP4_RS05275 PP4_RS05305 SM00357 Cold shock protein domain PP4_RS05325 SM00487 DEAD-like helicases superfamily PP4_RS05325 SM00490 helicase superfamily c-terminal domain PP4_RS05350 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS05380 SM00769 Water Stress and Hypersensitive response PP4_RS05420 SM00491 PP4_RS05420 PP4_RS05475 SM00382 ATPases associated with a variety of cellular activities PP4_RS05480 SM00382 ATPases associated with a variety of cellular activities PP4_RS05515 SM00052 Putative diguanylate phosphodiesterase PP4_RS05515 SM00267 diguanylate cyclase PP4_RS05520 SM00487 DEAD-like helicases superfamily PP4_RS05520 SM00490 helicase superfamily c-terminal domain PP4_RS05570 SM00052 Putative diguanylate phosphodiesterase PP4_RS05570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS05570 SM00091 PAS domain PP4_RS05570 SM00267 diguanylate cyclase PP4_RS05575 SM00267 diguanylate cyclase PP4_RS05625 SM00870 PP4_RS05625 PP4_RS05710 SM00448 cheY-homologous receiver domain PP4_RS05710 SM00862 Transcriptional regulatory protein, C terminal PP4_RS05715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS05715 SM00387 Histidine kinase-like ATPases PP4_RS05715 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS05735 SM00448 cheY-homologous receiver domain PP4_RS05735 SM00862 Transcriptional regulatory protein, C terminal PP4_RS05740 SM00387 Histidine kinase-like ATPases PP4_RS05740 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS05760 SM00363 S4 RNA-binding domain PP4_RS05795 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS05860 SM00357 Cold shock protein domain PP4_RS05875 SM00834 Putative regulatory protein PP4_RS05895 SM00278 Helix-hairpin-helix DNA-binding motif class 1 PP4_RS05900 SM00382 ATPases associated with a variety of cellular activities PP4_RS05960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS05960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS06010 SM01130 PP4_RS06010 PP4_RS06020 SM00849 Metallo-beta-lactamase superfamily PP4_RS06065 SM00965 Secretin and TonB N terminus short domain PP4_RS06085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PP4_RS06110 SM01130 PP4_RS06110 PP4_RS06125 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS06135 SM00852 Probable molybdopterin binding domain PP4_RS06145 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS06155 SM00344 helix_turn_helix ASNC type PP4_RS06175 SM00341 Helicase and RNase D C-terminal PP4_RS06175 SM00474 3'-5' exonuclease PP4_RS06210 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS06210 SM00895 PP4_RS06210 PP4_RS06225 SM01130 PP4_RS06225 PP4_RS06240 SM00507 HNH nucleases PP4_RS06280 SM00796 Allophanate hydrolase subunit 1 PP4_RS06285 SM00797 Allophanate hydrolase subunit 2 PP4_RS06295 SM00382 ATPases associated with a variety of cellular activities PP4_RS06315 SM00382 ATPases associated with a variety of cellular activities PP4_RS06330 SM00823 Phosphopantetheine attachment site PP4_RS06335 SM00823 Phosphopantetheine attachment site PP4_RS06345 SM00823 Phosphopantetheine attachment site PP4_RS06360 SM00965 Secretin and TonB N terminus short domain PP4_RS06405 SM00965 Secretin and TonB N terminus short domain PP4_RS06410 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS06420 SM00710 Parallel beta-helix repeats PP4_RS06500 SM01230 PP4_RS06500 PP4_RS06510 SM00382 ATPases associated with a variety of cellular activities PP4_RS06510 SM00487 DEAD-like helicases superfamily PP4_RS06510 SM00490 helicase superfamily c-terminal domain PP4_RS06510 SM00847 Helicase associated domain (HA2) Add an annotation PP4_RS06530 SM00382 ATPases associated with a variety of cellular activities PP4_RS06575 SM00487 DEAD-like helicases superfamily PP4_RS06575 SM00490 helicase superfamily c-terminal domain PP4_RS06630 SM00091 PAS domain PP4_RS06630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS06635 SM01144 PP4_RS06635 PP4_RS06655 SM00341 Helicase and RNase D C-terminal PP4_RS06655 SM00487 DEAD-like helicases superfamily PP4_RS06655 SM00490 helicase superfamily c-terminal domain PP4_RS06655 SM00956 PP4_RS06655 PP4_RS06660 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS06680 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS06695 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS06710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS06710 SM00387 Histidine kinase-like ATPases PP4_RS06710 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS06720 SM00448 cheY-homologous receiver domain PP4_RS06720 SM00862 Transcriptional regulatory protein, C terminal PP4_RS06735 SM00481 DNA polymerase alpha chain like domain PP4_RS06755 SM00363 S4 RNA-binding domain PP4_RS06790 SM00091 PAS domain PP4_RS06790 SM00382 ATPases associated with a variety of cellular activities PP4_RS06805 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS06820 SM00382 ATPases associated with a variety of cellular activities PP4_RS06825 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS06870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain PP4_RS06905 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS06905 SM00924 MgtE intracellular N domain PP4_RS06915 SM00072 Guanylate kinase homologues. PP4_RS06945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS06945 SM00091 PAS domain PP4_RS06945 SM00267 diguanylate cyclase PP4_RS06960 SM00861 Transketolase, pyrimidine binding domain PP4_RS06970 SM00344 helix_turn_helix ASNC type PP4_RS06975 SM01230 PP4_RS06975 PP4_RS07000 SM00858 PP4_RS07000 PP4_RS07005 SM00260 Two component signalling adaptor domain PP4_RS07005 SM00448 cheY-homologous receiver domain PP4_RS07010 SM00138 Methyltransferase, chemotaxis proteins PP4_RS07060 SM00047 Lysozyme subfamily 2 PP4_RS07105 SM00382 ATPases associated with a variety of cellular activities PP4_RS07175 SM00091 PAS domain PP4_RS07175 SM00387 Histidine kinase-like ATPases PP4_RS07175 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS07180 SM00382 ATPases associated with a variety of cellular activities PP4_RS07180 SM00448 cheY-homologous receiver domain PP4_RS07205 SM00382 ATPases associated with a variety of cellular activities PP4_RS07220 SM00331 Sigma factor PP2C-like phosphatases PP4_RS07220 SM00448 cheY-homologous receiver domain PP4_RS07280 SM00382 ATPases associated with a variety of cellular activities PP4_RS07280 SM00962 SRP54-type protein, GTPase domain PP4_RS07295 SM00448 cheY-homologous receiver domain PP4_RS07305 SM00073 Histidine Phosphotransfer domain PP4_RS07305 SM00260 Two component signalling adaptor domain PP4_RS07305 SM00387 Histidine kinase-like ATPases PP4_RS07305 SM01231 PP4_RS07305 PP4_RS07310 SM00448 cheY-homologous receiver domain PP4_RS07330 SM00260 Two component signalling adaptor domain PP4_RS07335 SM00260 Two component signalling adaptor domain PP4_RS07360 SM00382 ATPases associated with a variety of cellular activities PP4_RS07400 SM00028 Tetratricopeptide repeats PP4_RS07450 SM00344 helix_turn_helix ASNC type PP4_RS07570 SM00095 Transthyretin PP4_RS07580 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS07580 SM00895 PP4_RS07580 PP4_RS07600 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS07605 SM01092 CO dehydrogenase flavoprotein C-terminal domain PP4_RS07610 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS07615 SM00968 SMC proteins Flexible Hinge Domain PP4_RS07620 SM00771 ZipA, C-terminal domain (FtsZ-binding) PP4_RS07625 SM00278 Helix-hairpin-helix DNA-binding motif class 1 PP4_RS07625 SM00292 breast cancer carboxy-terminal domain PP4_RS07625 SM00532 Ligase N family PP4_RS07645 SM00422 helix_turn_helix, mercury resistance PP4_RS07665 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS07670 SM00382 ATPases associated with a variety of cellular activities PP4_RS07680 SM00493 PP4_RS07680 PP4_RS07690 SM00100 Cyclic nucleotide-monophosphate binding domain PP4_RS07690 SM00419 helix_turn_helix, cAMP Regulatory protein PP4_RS07695 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS07775 SM00479 PP4_RS07775 PP4_RS07780 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS07785 SM01006 Siderophore biosynthesis protein domain PP4_RS07795 SM00823 Phosphopantetheine attachment site PP4_RS07850 SM00448 cheY-homologous receiver domain PP4_RS07850 SM00862 Transcriptional regulatory protein, C terminal PP4_RS07855 SM00387 Histidine kinase-like ATPases PP4_RS07855 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS07870 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. PP4_RS07900 SM00382 ATPases associated with a variety of cellular activities PP4_RS07930 SM00893 Electron transfer flavoprotein domain PP4_RS07935 SM00893 Electron transfer flavoprotein domain PP4_RS07955 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS08000 SM00861 Transketolase, pyrimidine binding domain PP4_RS08020 SM00881 CoA binding domain PP4_RS08050 SM00387 Histidine kinase-like ATPases PP4_RS08070 SM00825 Beta-ketoacyl synthase PP4_RS08080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS08080 SM00387 Histidine kinase-like ATPases PP4_RS08080 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS08080 SM00448 cheY-homologous receiver domain PP4_RS08105 SM00855 Phosphoglycerate mutase family PP4_RS08155 SM00387 Histidine kinase-like ATPases PP4_RS08155 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS08160 SM00448 cheY-homologous receiver domain PP4_RS08160 SM00862 Transcriptional regulatory protein, C terminal PP4_RS08195 SM00382 ATPases associated with a variety of cellular activities PP4_RS08220 SM00257 Lysin motif PP4_RS08225 SM00849 Metallo-beta-lactamase superfamily PP4_RS08240 SM00479 PP4_RS08240 PP4_RS08265 SM00421 helix_turn_helix, Lux Regulon PP4_RS08325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS08325 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PP4_RS08330 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PP4_RS08380 SM00838 Elongation factor G C-terminus PP4_RS08380 SM00889 Elongation factor G, domain IV PP4_RS08440 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS08450 SM00278 Helix-hairpin-helix DNA-binding motif class 1 PP4_RS08450 SM00465 GIY-YIG type nucleases (URI domain) PP4_RS08470 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS08490 SM00382 ATPases associated with a variety of cellular activities PP4_RS08585 SM01007 Class II Aldolase and Adducin N-terminal domain PP4_RS08610 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS08615 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS08620 SM00878 Biotin carboxylase C-terminal domain PP4_RS08620 SM01209 PP4_RS08620 PP4_RS08655 SM00642 Alpha-amylase domain PP4_RS08660 SM00642 Alpha-amylase domain PP4_RS08665 SM00642 Alpha-amylase domain PP4_RS08670 SM00869 Autotransporter beta-domain PP4_RS08680 SM00642 Alpha-amylase domain PP4_RS08690 SM00642 Alpha-amylase domain PP4_RS08700 SM00642 Alpha-amylase domain PP4_RS08710 SM01350 PP4_RS08710 PP4_RS08820 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain PP4_RS08820 SM00437 Bacterial DNA topoisomerase I DNA-binding domain PP4_RS08820 SM00493 PP4_RS08820 PP4_RS08830 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. PP4_RS08860 SM01329 PP4_RS08860 PP4_RS08865 SM00357 Cold shock protein domain PP4_RS08875 SM00382 ATPases associated with a variety of cellular activities PP4_RS08875 SM01086 C-terminal, D2-small domain, of ClpB protein PP4_RS08880 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS08895 SM00843 PP4_RS08895 PP4_RS08905 SM00382 ATPases associated with a variety of cellular activities PP4_RS08990 SM00882 Coenzyme A transferase PP4_RS08995 SM00882 Coenzyme A transferase PP4_RS09000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS09000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS09025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS09035 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS09095 SM00267 diguanylate cyclase PP4_RS09115 SM00267 diguanylate cyclase PP4_RS09150 SM00855 Phosphoglycerate mutase family PP4_RS09325 SM00387 Histidine kinase-like ATPases PP4_RS09325 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS09330 SM00448 cheY-homologous receiver domain PP4_RS09330 SM00862 Transcriptional regulatory protein, C terminal PP4_RS09340 SM00822 PP4_RS09340 PP4_RS09365 SM00829 Enoylreductase PP4_RS09390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS09390 SM00091 PAS domain PP4_RS09390 SM00387 Histidine kinase-like ATPases PP4_RS09390 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS09395 SM00382 ATPases associated with a variety of cellular activities PP4_RS09400 SM00448 cheY-homologous receiver domain PP4_RS09415 SM00382 ATPases associated with a variety of cellular activities PP4_RS09590 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS09600 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS09615 SM00903 Flavin reductase like domain PP4_RS09660 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS09665 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS09670 SM00870 PP4_RS09670 PP4_RS09680 SM00382 ATPases associated with a variety of cellular activities PP4_RS09690 SM00354 helix_turn _helix lactose operon repressor PP4_RS09720 SM00357 Cold shock protein domain PP4_RS09730 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain PP4_RS09755 SM00873 B3/4 domain PP4_RS09755 SM00874 tRNA synthetase B5 domain PP4_RS09755 SM00896 Ferredoxin-fold anticodon binding domain PP4_RS09760 SM00411 bacterial (prokaryotic) histone like domain PP4_RS09765 SM00422 helix_turn_helix, mercury resistance PP4_RS09810 SM00421 helix_turn_helix, Lux Regulon PP4_RS09830 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS09840 SM00869 Autotransporter beta-domain PP4_RS09945 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS10025 SM00953 PP4_RS10025 PP4_RS10065 SM00382 ATPases associated with a variety of cellular activities PP4_RS10150 SM00923 MbtH-like protein PP4_RS10155 SM00824 Thioesterase PP4_RS10180 SM00382 ATPases associated with a variety of cellular activities PP4_RS10295 SM00448 cheY-homologous receiver domain PP4_RS10300 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS10300 SM00387 Histidine kinase-like ATPases PP4_RS10300 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS10300 SM00448 cheY-homologous receiver domain PP4_RS10305 SM00138 Methyltransferase, chemotaxis proteins PP4_RS10315 SM00387 Histidine kinase-like ATPases PP4_RS10315 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS10315 SM00448 cheY-homologous receiver domain PP4_RS10320 SM00448 cheY-homologous receiver domain PP4_RS10340 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS10355 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS10390 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS10390 SM00895 PP4_RS10390 PP4_RS10415 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS10445 SM00382 ATPases associated with a variety of cellular activities PP4_RS10465 SM00822 PP4_RS10465 PP4_RS10510 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS10510 SM00895 PP4_RS10510 PP4_RS10530 SM00382 ATPases associated with a variety of cellular activities PP4_RS10535 SM00382 ATPases associated with a variety of cellular activities PP4_RS10580 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS10580 SM00895 PP4_RS10580 PP4_RS10600 SM00382 ATPases associated with a variety of cellular activities PP4_RS10625 SM00448 cheY-homologous receiver domain PP4_RS10625 SM00862 Transcriptional regulatory protein, C terminal PP4_RS10630 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS10635 SM00387 Histidine kinase-like ATPases PP4_RS10635 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS10635 SM00448 cheY-homologous receiver domain PP4_RS10655 SM00881 CoA binding domain PP4_RS10665 SM01005 Alanine racemase, C-terminal domain PP4_RS10695 SM00421 helix_turn_helix, Lux Regulon PP4_RS10700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS10700 SM00091 PAS domain PP4_RS10700 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS10720 SM01329 PP4_RS10720 PP4_RS10730 SM00344 helix_turn_helix ASNC type PP4_RS10750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PP4_RS10770 SM00052 Putative diguanylate phosphodiesterase PP4_RS10770 SM00091 PAS domain PP4_RS10770 SM00267 diguanylate cyclase PP4_RS10805 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS10810 SM00155 Phospholipase D. Active site motifs. PP4_RS10825 SM00267 diguanylate cyclase PP4_RS10860 SM00448 cheY-homologous receiver domain PP4_RS10865 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS10865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS10865 SM00387 Histidine kinase-like ATPases PP4_RS10880 SM00886 Stress responsive A/B Barrel Domain PP4_RS10935 SM00382 ATPases associated with a variety of cellular activities PP4_RS10950 SM00354 helix_turn _helix lactose operon repressor PP4_RS10955 SM00564 beta-propeller repeat PP4_RS10970 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS10980 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS10985 SM01230 PP4_RS10985 PP4_RS11015 SM00344 helix_turn_helix ASNC type PP4_RS11025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS11025 SM00387 Histidine kinase-like ATPases PP4_RS11025 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS11035 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS11035 SM00895 PP4_RS11035 PP4_RS11045 SM00903 Flavin reductase like domain PP4_RS11070 SM00903 Flavin reductase like domain PP4_RS11080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS11080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS11105 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS11120 SM00382 ATPases associated with a variety of cellular activities PP4_RS11140 SM00859 Semialdehyde dehydrogenase, NAD binding domain PP4_RS11155 SM00287 Bacterial SH3 domain homologues PP4_RS11190 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS11205 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS11270 SM00829 Enoylreductase PP4_RS11290 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS11290 SM00895 PP4_RS11290 PP4_RS11300 SM00858 PP4_RS11300 PP4_RS11310 SM01130 PP4_RS11310 PP4_RS11320 SM00382 ATPases associated with a variety of cellular activities PP4_RS11340 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS11395 SM00052 Putative diguanylate phosphodiesterase PP4_RS11395 SM00267 diguanylate cyclase PP4_RS11425 SM00965 Secretin and TonB N terminus short domain PP4_RS11480 SM00564 beta-propeller repeat PP4_RS11505 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS11540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS11540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS11565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS11565 SM00091 PAS domain PP4_RS11565 SM00387 Histidine kinase-like ATPases PP4_RS11565 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS11570 SM00421 helix_turn_helix, Lux Regulon PP4_RS11570 SM00448 cheY-homologous receiver domain PP4_RS11575 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS11590 SM00822 PP4_RS11590 PP4_RS11595 SM00387 Histidine kinase-like ATPases PP4_RS11595 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS11595 SM00448 cheY-homologous receiver domain PP4_RS11600 SM00387 Histidine kinase-like ATPases PP4_RS11600 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS11600 SM00448 cheY-homologous receiver domain PP4_RS11605 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS11630 SM00422 helix_turn_helix, mercury resistance PP4_RS11635 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS11645 SM00248 ankyrin repeats PP4_RS11670 SM00344 helix_turn_helix ASNC type PP4_RS11710 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS11730 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS11780 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS11810 SM00382 ATPases associated with a variety of cellular activities PP4_RS11825 SM00833 Cobalamin synthesis protein cobW C-terminal domain PP4_RS11835 SM00382 ATPases associated with a variety of cellular activities PP4_RS11850 SM00382 ATPases associated with a variety of cellular activities PP4_RS11870 SM00857 Resolvase, N terminal domain PP4_RS11995 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. PP4_RS12040 SM00448 cheY-homologous receiver domain PP4_RS12070 SM00965 Secretin and TonB N terminus short domain PP4_RS12110 SM00091 PAS domain PP4_RS12110 SM00382 ATPases associated with a variety of cellular activities PP4_RS12115 SM00382 ATPases associated with a variety of cellular activities PP4_RS12180 SM00448 cheY-homologous receiver domain PP4_RS12180 SM00862 Transcriptional regulatory protein, C terminal PP4_RS12185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS12185 SM00387 Histidine kinase-like ATPases PP4_RS12185 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS12190 SM00267 diguanylate cyclase PP4_RS12260 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS12270 SM00869 Autotransporter beta-domain PP4_RS12285 SM00822 PP4_RS12285 PP4_RS12345 SM00965 Secretin and TonB N terminus short domain PP4_RS12405 SM00382 ATPases associated with a variety of cellular activities PP4_RS12405 SM01086 C-terminal, D2-small domain, of ClpB protein PP4_RS12555 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS12560 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS12565 SM00822 PP4_RS12565 PP4_RS12610 SM00481 DNA polymerase alpha chain like domain PP4_RS12625 SM00882 Coenzyme A transferase PP4_RS12630 SM00882 Coenzyme A transferase PP4_RS12640 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS12760 SM01230 PP4_RS12760 PP4_RS12765 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS12820 SM00382 ATPases associated with a variety of cellular activities PP4_RS12835 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS12840 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS12895 SM00357 Cold shock protein domain PP4_RS12950 SM00052 Putative diguanylate phosphodiesterase PP4_RS12950 SM00267 diguanylate cyclase PP4_RS13065 SM01236 PP4_RS13065 PP4_RS13110 SM00421 helix_turn_helix, Lux Regulon PP4_RS13110 SM00448 cheY-homologous receiver domain PP4_RS13115 SM00387 Histidine kinase-like ATPases PP4_RS13115 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS13115 SM00448 cheY-homologous receiver domain PP4_RS13210 SM00100 Cyclic nucleotide-monophosphate binding domain PP4_RS13210 SM00419 helix_turn_helix, cAMP Regulatory protein PP4_RS13225 SM00849 Metallo-beta-lactamase superfamily PP4_RS13225 SM01027 Beta-Casp domain PP4_RS13285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS13285 SM00091 PAS domain PP4_RS13290 SM00422 helix_turn_helix, mercury resistance PP4_RS13340 SM00858 PP4_RS13340 PP4_RS13440 SM00893 Electron transfer flavoprotein domain PP4_RS13445 SM00893 Electron transfer flavoprotein domain PP4_RS13485 SM00267 diguanylate cyclase PP4_RS13490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS13490 SM00091 PAS domain PP4_RS13490 SM00387 Histidine kinase-like ATPases PP4_RS13490 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS13490 SM00448 cheY-homologous receiver domain PP4_RS13520 SM00421 helix_turn_helix, Lux Regulon PP4_RS13550 SM00822 PP4_RS13550 PP4_RS13590 SM00882 Coenzyme A transferase PP4_RS13615 SM00849 Metallo-beta-lactamase superfamily PP4_RS13635 SM00822 PP4_RS13635 PP4_RS13640 SM00822 PP4_RS13640 PP4_RS13705 SM00822 PP4_RS13705 PP4_RS13750 SM00903 Flavin reductase like domain PP4_RS13755 SM00822 PP4_RS13755 PP4_RS13765 SM00859 Semialdehyde dehydrogenase, NAD binding domain PP4_RS13780 SM00893 Electron transfer flavoprotein domain PP4_RS13785 SM00893 Electron transfer flavoprotein domain PP4_RS13790 SM00382 ATPases associated with a variety of cellular activities PP4_RS13805 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS13805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. PP4_RS13810 SM00344 helix_turn_helix ASNC type PP4_RS13820 SM00344 helix_turn_helix ASNC type PP4_RS13865 SM00421 helix_turn_helix, Lux Regulon PP4_RS13870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS13870 SM00448 cheY-homologous receiver domain PP4_RS13870 SM00911 HWE histidine kinase PP4_RS13900 SM00382 ATPases associated with a variety of cellular activities PP4_RS13905 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS13915 SM00344 helix_turn_helix ASNC type PP4_RS13935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS13935 SM00387 Histidine kinase-like ATPases PP4_RS13935 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS13940 SM00448 cheY-homologous receiver domain PP4_RS13940 SM00862 Transcriptional regulatory protein, C terminal PP4_RS13980 SM00354 helix_turn _helix lactose operon repressor PP4_RS14080 SM00478 endonuclease III PP4_RS14080 SM01009 AlkA N-terminal domain PP4_RS14110 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS14130 SM00354 helix_turn _helix lactose operon repressor PP4_RS14150 SM01007 Class II Aldolase and Adducin N-terminal domain PP4_RS14170 SM00382 ATPases associated with a variety of cellular activities PP4_RS14220 SM00421 helix_turn_helix, Lux Regulon PP4_RS14220 SM00448 cheY-homologous receiver domain PP4_RS14225 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS14225 SM00387 Histidine kinase-like ATPases PP4_RS14225 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14225 SM00448 cheY-homologous receiver domain PP4_RS14230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS14230 SM00091 PAS domain PP4_RS14230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS14235 SM00354 helix_turn _helix lactose operon repressor PP4_RS14255 SM00382 ATPases associated with a variety of cellular activities PP4_RS14255 SM00448 cheY-homologous receiver domain PP4_RS14260 SM00387 Histidine kinase-like ATPases PP4_RS14260 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14265 SM00387 Histidine kinase-like ATPases PP4_RS14265 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14290 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS14300 SM00450 Rhodanese Homology Domain PP4_RS14315 SM00965 Secretin and TonB N terminus short domain PP4_RS14335 SM00028 Tetratricopeptide repeats PP4_RS14340 SM00387 Histidine kinase-like ATPases PP4_RS14340 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14340 SM00448 cheY-homologous receiver domain PP4_RS14345 SM00091 PAS domain PP4_RS14345 SM00387 Histidine kinase-like ATPases PP4_RS14345 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14345 SM00448 cheY-homologous receiver domain PP4_RS14365 SM00052 Putative diguanylate phosphodiesterase PP4_RS14375 SM01091 Transporter associated domain PP4_RS14385 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS14465 SM00422 helix_turn_helix, mercury resistance PP4_RS14490 SM00382 ATPases associated with a variety of cellular activities PP4_RS14540 SM00984 UDP binding domain PP4_RS14555 SM01259 PP4_RS14555 PP4_RS14610 SM00797 Allophanate hydrolase subunit 2 PP4_RS14615 SM00796 Allophanate hydrolase subunit 1 PP4_RS14650 SM01004 Delta-aminolevulinic acid dehydratase PP4_RS14655 SM00090 RIO-like kinase PP4_RS14675 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS14675 SM00895 PP4_RS14675 PP4_RS14680 SM00448 cheY-homologous receiver domain PP4_RS14680 SM00862 Transcriptional regulatory protein, C terminal PP4_RS14685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS14685 SM00387 Histidine kinase-like ATPases PP4_RS14685 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS14690 SM00840 PP4_RS14690 PP4_RS14775 SM01060 PP4_RS14775 PP4_RS14790 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS14855 SM01007 Class II Aldolase and Adducin N-terminal domain PP4_RS14870 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS14905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS14905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS14905 SM01049 PP4_RS14905 PP4_RS14975 SM00988 UreE urease accessory protein, N-terminal domain PP4_RS15005 SM00488 PP4_RS15005 PP4_RS15005 SM00491 PP4_RS15005 PP4_RS15010 SM00990 PP4_RS15010 PP4_RS15030 SM00858 PP4_RS15030 PP4_RS15045 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PP4_RS15055 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS15065 SM00829 Enoylreductase PP4_RS15155 SM00490 helicase superfamily c-terminal domain PP4_RS15170 SM00422 helix_turn_helix, mercury resistance PP4_RS15180 SM00822 PP4_RS15180 PP4_RS15190 SM00966 SpoVT / AbrB like domain PP4_RS15215 SM00091 PAS domain PP4_RS15215 SM00387 Histidine kinase-like ATPases PP4_RS15215 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS15240 SM01092 CO dehydrogenase flavoprotein C-terminal domain PP4_RS15245 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PP4_RS15250 SM00829 Enoylreductase PP4_RS15290 SM00387 Histidine kinase-like ATPases PP4_RS15290 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS15290 SM00448 cheY-homologous receiver domain PP4_RS15295 SM00387 Histidine kinase-like ATPases PP4_RS15295 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS15300 SM00331 Sigma factor PP2C-like phosphatases PP4_RS15330 SM00155 Phospholipase D. Active site motifs. PP4_RS15375 SM00267 diguanylate cyclase PP4_RS15380 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS15440 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen PP4_RS15445 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS15450 SM00822 PP4_RS15450 PP4_RS15455 SM00829 Enoylreductase PP4_RS15485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PP4_RS15490 SM00226 Low molecular weight phosphatase family PP4_RS15505 SM00945 ProQ/FINO family PP4_RS15515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS15515 SM00267 diguanylate cyclase PP4_RS15545 SM00564 beta-propeller repeat PP4_RS15550 SM00822 PP4_RS15550 PP4_RS15595 SM00028 Tetratricopeptide repeats PP4_RS15595 SM00327 von Willebrand factor (vWF) type A domain PP4_RS15600 SM00327 von Willebrand factor (vWF) type A domain PP4_RS15620 SM00028 Tetratricopeptide repeats PP4_RS15665 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS15735 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS15755 SM00382 ATPases associated with a variety of cellular activities PP4_RS15845 SM00460 Transglutaminase/protease-like homologues PP4_RS15880 SM00387 Histidine kinase-like ATPases PP4_RS15880 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS15880 SM00448 cheY-homologous receiver domain PP4_RS15895 SM00564 beta-propeller repeat PP4_RS15900 SM00849 Metallo-beta-lactamase superfamily PP4_RS15910 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS15920 SM00564 beta-propeller repeat PP4_RS15930 SM00421 helix_turn_helix, Lux Regulon PP4_RS15930 SM00448 cheY-homologous receiver domain PP4_RS15935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS15935 SM00387 Histidine kinase-like ATPases PP4_RS15950 SM00382 ATPases associated with a variety of cellular activities PP4_RS15965 SM00421 helix_turn_helix, Lux Regulon PP4_RS15965 SM00448 cheY-homologous receiver domain PP4_RS15970 SM00387 Histidine kinase-like ATPases PP4_RS15970 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS15970 SM00448 cheY-homologous receiver domain PP4_RS15975 SM00897 FIST N domain PP4_RS15975 SM01204 PP4_RS15975 PP4_RS15995 SM00382 ATPases associated with a variety of cellular activities PP4_RS16035 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS16080 SM00831 Cation transporter/ATPase, N-terminus PP4_RS16085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS16085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS16100 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS16115 SM00965 Secretin and TonB N terminus short domain PP4_RS16130 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS16170 SM00421 helix_turn_helix, Lux Regulon PP4_RS16170 SM00448 cheY-homologous receiver domain PP4_RS16175 SM00387 Histidine kinase-like ATPases PP4_RS16175 SM00448 cheY-homologous receiver domain PP4_RS16185 SM01130 PP4_RS16185 PP4_RS16195 SM00028 Tetratricopeptide repeats PP4_RS16240 SM00382 ATPases associated with a variety of cellular activities PP4_RS16245 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS16250 SM00382 ATPases associated with a variety of cellular activities PP4_RS16285 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS16350 SM00346 helix_turn_helix isocitrate lyase regulation PP4_RS16360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS16360 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PP4_RS16375 SM00421 helix_turn_helix, Lux Regulon PP4_RS16400 SM00382 ATPases associated with a variety of cellular activities PP4_RS16450 SM00822 PP4_RS16450 PP4_RS16600 SM00965 Secretin and TonB N terminus short domain PP4_RS16615 SM00965 Secretin and TonB N terminus short domain PP4_RS16650 SM00382 ATPases associated with a variety of cellular activities PP4_RS16685 SM00382 ATPases associated with a variety of cellular activities PP4_RS16710 SM01007 Class II Aldolase and Adducin N-terminal domain PP4_RS16725 SM00382 ATPases associated with a variety of cellular activities PP4_RS16730 SM00382 ATPases associated with a variety of cellular activities PP4_RS16770 SM00382 ATPases associated with a variety of cellular activities PP4_RS16775 SM00830 Chorismate mutase type II PP4_RS16790 SM00091 PAS domain PP4_RS16790 SM00267 diguanylate cyclase PP4_RS16850 SM00965 Secretin and TonB N terminus short domain PP4_RS16875 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS16940 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS16960 SM00829 Enoylreductase PP4_RS16965 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS16990 SM00965 Secretin and TonB N terminus short domain PP4_RS17040 SM00382 ATPases associated with a variety of cellular activities PP4_RS17070 SM00267 diguanylate cyclase PP4_RS17140 SM00448 cheY-homologous receiver domain PP4_RS17140 SM00862 Transcriptional regulatory protein, C terminal PP4_RS17145 SM00387 Histidine kinase-like ATPases PP4_RS17175 SM00369 Leucine-rich repeats, typical (most populated) subfamily PP4_RS17185 SM00486 DNA polymerase type-B family PP4_RS17235 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS17275 SM01018 B12 binding domain PP4_RS17300 SM00369 Leucine-rich repeats, typical (most populated) subfamily PP4_RS17315 SM00387 Histidine kinase-like ATPases PP4_RS17315 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS17320 SM00448 cheY-homologous receiver domain PP4_RS17320 SM00862 Transcriptional regulatory protein, C terminal PP4_RS17335 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS17340 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS17345 SM00869 Autotransporter beta-domain PP4_RS17350 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS17355 SM00631 PP4_RS17355 PP4_RS17360 SM00972 Spore Coat Protein U domain PP4_RS17375 SM00972 Spore Coat Protein U domain PP4_RS17380 SM00972 Spore Coat Protein U domain PP4_RS17385 SM00972 Spore Coat Protein U domain PP4_RS17390 SM00972 Spore Coat Protein U domain PP4_RS17395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS17395 SM00387 Histidine kinase-like ATPases PP4_RS17395 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS17400 SM00448 cheY-homologous receiver domain PP4_RS17405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS17405 SM00091 PAS domain PP4_RS17405 SM00387 Histidine kinase-like ATPases PP4_RS17405 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS17405 SM00448 cheY-homologous receiver domain PP4_RS17435 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS17440 SM00387 Histidine kinase-like ATPases PP4_RS17445 SM00448 cheY-homologous receiver domain PP4_RS17445 SM00862 Transcriptional regulatory protein, C terminal PP4_RS17505 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS17505 SM00895 PP4_RS17505 PP4_RS17580 SM00382 ATPases associated with a variety of cellular activities PP4_RS17605 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS17615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS17615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS17630 SM00880 PP4_RS17630 PP4_RS17650 SM00411 bacterial (prokaryotic) histone like domain PP4_RS17655 SM00382 ATPases associated with a variety of cellular activities PP4_RS17655 SM00464 Found in ATP-dependent protease La (LON) PP4_RS17660 SM00382 ATPases associated with a variety of cellular activities PP4_RS17660 SM00994 ClpX C4-type zinc finger PP4_RS17660 SM01086 C-terminal, D2-small domain, of ClpB protein PP4_RS17735 SM00382 ATPases associated with a variety of cellular activities PP4_RS17740 SM00382 ATPases associated with a variety of cellular activities PP4_RS17745 SM00382 ATPases associated with a variety of cellular activities PP4_RS17750 SM00052 Putative diguanylate phosphodiesterase PP4_RS17750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS17750 SM00091 PAS domain PP4_RS17750 SM00267 diguanylate cyclase PP4_RS17755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS17765 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS17765 SM00895 PP4_RS17765 PP4_RS17770 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS17770 SM00895 PP4_RS17770 PP4_RS17790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS17790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS17810 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS17820 SM00855 Phosphoglycerate mutase family PP4_RS17855 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS17895 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS17920 SM00829 Enoylreductase PP4_RS17925 SM00822 PP4_RS17925 PP4_RS17935 SM00855 Phosphoglycerate mutase family PP4_RS17950 SM00421 helix_turn_helix, Lux Regulon PP4_RS17970 SM00822 PP4_RS17970 PP4_RS17975 SM00382 ATPases associated with a variety of cellular activities PP4_RS17985 SM00382 ATPases associated with a variety of cellular activities PP4_RS18050 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS18125 SM00822 PP4_RS18125 PP4_RS18135 SM00369 Leucine-rich repeats, typical (most populated) subfamily PP4_RS18140 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS18165 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS18235 SM00965 Secretin and TonB N terminus short domain PP4_RS18245 SM00769 Water Stress and Hypersensitive response PP4_RS18275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS18275 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PP4_RS18280 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PP4_RS18325 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS18340 SM01230 PP4_RS18340 PP4_RS18345 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS18375 SM00862 Transcriptional regulatory protein, C terminal PP4_RS18455 SM00947 Carbonic anhydrase PP4_RS18460 SM01116 PP4_RS18460 PP4_RS18480 SM00422 helix_turn_helix, mercury resistance PP4_RS18500 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS18500 SM00871 Bacterial transcription activator, effector binding domain PP4_RS18540 SM00331 Sigma factor PP2C-like phosphatases PP4_RS18540 SM00448 cheY-homologous receiver domain PP4_RS18575 SM00448 cheY-homologous receiver domain PP4_RS18575 SM00862 Transcriptional regulatory protein, C terminal PP4_RS18580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS18580 SM00387 Histidine kinase-like ATPases PP4_RS18580 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS18590 SM00382 ATPases associated with a variety of cellular activities PP4_RS18620 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS18625 SM00487 DEAD-like helicases superfamily PP4_RS18625 SM00490 helicase superfamily c-terminal domain PP4_RS18625 SM00982 PP4_RS18625 PP4_RS18625 SM01058 CarD-like/TRCF domain PP4_RS18635 SM00487 DEAD-like helicases superfamily PP4_RS18635 SM00490 helicase superfamily c-terminal domain PP4_RS18675 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain PP4_RS18675 SM00437 Bacterial DNA topoisomerase I DNA-binding domain PP4_RS18675 SM00493 PP4_RS18675 PP4_RS18705 SM00382 ATPases associated with a variety of cellular activities PP4_RS18720 SM00260 Two component signalling adaptor domain PP4_RS18720 SM00448 cheY-homologous receiver domain PP4_RS18735 SM00421 helix_turn_helix, Lux Regulon PP4_RS18735 SM00448 cheY-homologous receiver domain PP4_RS18740 SM00046 Diacylglycerol kinase catalytic domain (presumed) PP4_RS18750 SM00852 Probable molybdopterin binding domain PP4_RS18755 SM00852 Probable molybdopterin binding domain PP4_RS18770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS18770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS18775 SM00382 ATPases associated with a variety of cellular activities PP4_RS18800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS18800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS18845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PP4_RS18850 SM00421 helix_turn_helix, Lux Regulon PP4_RS18850 SM00448 cheY-homologous receiver domain PP4_RS18855 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS18855 SM00387 Histidine kinase-like ATPases PP4_RS18855 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS18855 SM00448 cheY-homologous receiver domain PP4_RS18870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS18870 SM00091 PAS domain PP4_RS18870 SM00267 diguanylate cyclase PP4_RS18870 SM01079 PP4_RS18870 PP4_RS18875 SM00981 PP4_RS18875 PP4_RS18890 SM00448 cheY-homologous receiver domain PP4_RS18890 SM01012 PP4_RS18890 PP4_RS18900 SM00220 Serine/Threonine protein kinases, catalytic domain PP4_RS18900 SM00331 Sigma factor PP2C-like phosphatases PP4_RS18900 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain PP4_RS18985 SM00965 Secretin and TonB N terminus short domain PP4_RS19015 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS19035 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS19035 SM00866 PP4_RS19035 PP4_RS19050 SM00422 helix_turn_helix, mercury resistance PP4_RS19095 SM01007 Class II Aldolase and Adducin N-terminal domain PP4_RS19100 SM01130 PP4_RS19100 PP4_RS19135 SM00327 von Willebrand factor (vWF) type A domain PP4_RS19140 SM00028 Tetratricopeptide repeats PP4_RS19240 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS19320 SM00859 Semialdehyde dehydrogenase, NAD binding domain PP4_RS19325 SM00859 Semialdehyde dehydrogenase, NAD binding domain PP4_RS19330 SM01329 PP4_RS19330 PP4_RS19355 SM00052 Putative diguanylate phosphodiesterase PP4_RS19355 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS19355 SM00091 PAS domain PP4_RS19355 SM00267 diguanylate cyclase PP4_RS19430 SM00487 DEAD-like helicases superfamily PP4_RS19430 SM00490 helicase superfamily c-terminal domain PP4_RS19460 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS19495 SM00825 Beta-ketoacyl synthase PP4_RS19505 SM00822 PP4_RS19505 PP4_RS19510 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. PP4_RS19545 SM00363 S4 RNA-binding domain PP4_RS19550 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS19560 SM00226 Low molecular weight phosphatase family PP4_RS19590 SM00849 Metallo-beta-lactamase superfamily PP4_RS19600 SM00382 ATPases associated with a variety of cellular activities PP4_RS19700 SM00387 Histidine kinase-like ATPases PP4_RS19700 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS19700 SM00448 cheY-homologous receiver domain PP4_RS19735 SM00487 DEAD-like helicases superfamily PP4_RS19735 SM00490 helicase superfamily c-terminal domain PP4_RS19770 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS19780 SM00841 Elongation factor P, C-terminal PP4_RS19780 SM01185 PP4_RS19780 PP4_RS19805 SM00822 PP4_RS19805 PP4_RS19835 SM00563 Phosphate acyltransferases PP4_RS19885 SM00248 ankyrin repeats PP4_RS19935 SM00463 Small MutS-related domain PP4_RS19960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS19960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS19960 SM01358 PP4_RS19960 PP4_RS19965 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS19980 SM00829 Enoylreductase PP4_RS19990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family PP4_RS20005 SM00984 UDP binding domain PP4_RS20130 SM00849 Metallo-beta-lactamase superfamily PP4_RS20130 SM01027 Beta-Casp domain PP4_RS20140 SM00411 bacterial (prokaryotic) histone like domain PP4_RS20150 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS20165 SM00830 Chorismate mutase type II PP4_RS20175 SM00434 DNA Topoisomerase IV PP4_RS20195 SM00822 PP4_RS20195 PP4_RS20205 SM00052 Putative diguanylate phosphodiesterase PP4_RS20205 SM00091 PAS domain PP4_RS20205 SM00267 diguanylate cyclase PP4_RS20210 SM00382 ATPases associated with a variety of cellular activities PP4_RS20220 SM00450 Rhodanese Homology Domain PP4_RS20285 SM00822 PP4_RS20285 PP4_RS20290 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS20290 SM00387 Histidine kinase-like ATPases PP4_RS20290 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS20290 SM00448 cheY-homologous receiver domain PP4_RS20295 SM00421 helix_turn_helix, Lux Regulon PP4_RS20295 SM00448 cheY-homologous receiver domain PP4_RS20395 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS20395 SM00866 PP4_RS20395 PP4_RS20420 SM00382 ATPases associated with a variety of cellular activities PP4_RS20430 SM00829 Enoylreductase PP4_RS20435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PP4_RS20435 SM00245 tail specific protease PP4_RS20440 SM00052 Putative diguanylate phosphodiesterase PP4_RS20450 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS20485 SM00926 Molybdopterin oxidoreductase Fe4S4 domain PP4_RS20540 SM00563 Phosphate acyltransferases PP4_RS20550 SM00387 Histidine kinase-like ATPases PP4_RS20550 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS20550 SM00448 cheY-homologous receiver domain PP4_RS20610 SM00347 helix_turn_helix multiple antibiotic resistance protein PP4_RS20620 SM00855 Phosphoglycerate mutase family PP4_RS20730 SM00954 Region found in RelA / SpoT proteins PP4_RS20745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS20745 SM00387 Histidine kinase-like ATPases PP4_RS20745 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS20750 SM00448 cheY-homologous receiver domain PP4_RS20750 SM00862 Transcriptional regulatory protein, C terminal PP4_RS20755 SM00073 Histidine Phosphotransfer domain PP4_RS20755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS20755 SM00387 Histidine kinase-like ATPases PP4_RS20755 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS20755 SM00448 cheY-homologous receiver domain PP4_RS20810 SM00731 SprT homologues. PP4_RS20835 SM01144 PP4_RS20835 PP4_RS20860 SM00382 ATPases associated with a variety of cellular activities PP4_RS20875 SM00533 DNA-binding domain of DNA mismatch repair MUTS family PP4_RS20875 SM00534 ATPase domain of DNA mismatch repair MUTS family PP4_RS20895 SM00257 Lysin motif PP4_RS20945 SM01192 PP4_RS20945 PP4_RS20945 SM01193 PP4_RS20945 PP4_RS20960 SM00977 TilS substrate C-terminal domain PP4_RS20970 SM00481 DNA polymerase alpha chain like domain PP4_RS21000 SM00935 Outer membrane protein (OmpH-like) PP4_RS21010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PP4_RS21055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PP4_RS21070 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS21120 SM00357 Cold shock protein domain PP4_RS21125 SM00563 Phosphate acyltransferases PP4_RS21225 SM01154 PP4_RS21225 PP4_RS21245 SM00937 PP4_RS21245 PP4_RS21250 SM00267 diguanylate cyclase PP4_RS21250 SM00448 cheY-homologous receiver domain PP4_RS21255 SM00448 cheY-homologous receiver domain PP4_RS21260 SM00073 Histidine Phosphotransfer domain PP4_RS21260 SM00260 Two component signalling adaptor domain PP4_RS21260 SM00387 Histidine kinase-like ATPases PP4_RS21260 SM00448 cheY-homologous receiver domain PP4_RS21265 SM00260 Two component signalling adaptor domain PP4_RS21270 SM00028 Tetratricopeptide repeats PP4_RS21270 SM00138 Methyltransferase, chemotaxis proteins PP4_RS21275 SM00260 Two component signalling adaptor domain PP4_RS21280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS21280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS21295 SM00382 ATPases associated with a variety of cellular activities PP4_RS21325 SM01322 PP4_RS21325 PP4_RS21405 SM00382 ATPases associated with a variety of cellular activities PP4_RS21405 SM00962 SRP54-type protein, GTPase domain PP4_RS21405 SM00963 SRP54-type protein, helical bundle domain PP4_RS21415 SM01091 Transporter associated domain PP4_RS21550 SM01211 PP4_RS21550 PP4_RS21555 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS21580 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS21580 SM01240 PP4_RS21580 PP4_RS21610 SM00917 LeuA allosteric (dimerisation) domain PP4_RS21650 SM00382 ATPases associated with a variety of cellular activities PP4_RS21670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS21670 SM00387 Histidine kinase-like ATPases PP4_RS21670 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS21675 SM00448 cheY-homologous receiver domain PP4_RS21675 SM00862 Transcriptional regulatory protein, C terminal PP4_RS21690 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS21705 SM00965 Secretin and TonB N terminus short domain PP4_RS21750 SM00382 ATPases associated with a variety of cellular activities PP4_RS21780 SM00357 Cold shock protein domain PP4_RS21825 SM00411 bacterial (prokaryotic) histone like domain PP4_RS21850 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS21850 SM00895 PP4_RS21850 PP4_RS21905 SM00382 ATPases associated with a variety of cellular activities PP4_RS21910 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS21930 SM00382 ATPases associated with a variety of cellular activities PP4_RS22010 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS22045 SM00845 GatB domain PP4_RS22070 SM00448 cheY-homologous receiver domain PP4_RS22075 SM00387 Histidine kinase-like ATPases PP4_RS22075 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS22115 SM00382 ATPases associated with a variety of cellular activities PP4_RS22120 SM00382 ATPases associated with a variety of cellular activities PP4_RS22130 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS22155 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS22180 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS22180 SM00382 ATPases associated with a variety of cellular activities PP4_RS22185 SM00965 Secretin and TonB N terminus short domain PP4_RS22210 SM00671 Sel1-like repeats. PP4_RS22215 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. PP4_RS22250 SM00564 beta-propeller repeat PP4_RS22270 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS22275 SM00028 Tetratricopeptide repeats PP4_RS22285 SM00562 PP4_RS22285 PP4_RS22305 SM00271 DnaJ molecular chaperone homology domain PP4_RS22360 SM01323 PP4_RS22360 PP4_RS22430 SM00382 ATPases associated with a variety of cellular activities PP4_RS22515 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS22515 SM00382 ATPases associated with a variety of cellular activities PP4_RS22530 SM00382 ATPases associated with a variety of cellular activities PP4_RS22540 SM00260 Two component signalling adaptor domain PP4_RS22540 SM00448 cheY-homologous receiver domain PP4_RS22565 SM00448 cheY-homologous receiver domain PP4_RS22565 SM00862 Transcriptional regulatory protein, C terminal PP4_RS22570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS22570 SM00387 Histidine kinase-like ATPases PP4_RS22570 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS22585 SM00267 diguanylate cyclase PP4_RS22615 SM00354 helix_turn _helix lactose operon repressor PP4_RS22630 SM00644 PP4_RS22630 PP4_RS22655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS22655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS22695 SM00849 Metallo-beta-lactamase superfamily PP4_RS22705 SM00387 Histidine kinase-like ATPases PP4_RS22710 SM00028 Tetratricopeptide repeats PP4_RS22710 SM00448 cheY-homologous receiver domain PP4_RS22715 SM00382 ATPases associated with a variety of cellular activities PP4_RS22715 SM00421 helix_turn_helix, Lux Regulon PP4_RS22850 SM00422 helix_turn_helix, mercury resistance PP4_RS22885 SM00937 PP4_RS22885 PP4_RS22895 SM00028 Tetratricopeptide repeats PP4_RS22915 SM01400 PP4_RS22915 PP4_RS23000 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS23005 SM00478 endonuclease III PP4_RS23085 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase PP4_RS23170 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PP4_RS23175 SM00382 ATPases associated with a variety of cellular activities PP4_RS23185 SM00052 Putative diguanylate phosphodiesterase PP4_RS23185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) PP4_RS23185 SM00091 PAS domain PP4_RS23185 SM00267 diguanylate cyclase PP4_RS23340 SM00382 ATPases associated with a variety of cellular activities PP4_RS23340 SM01086 C-terminal, D2-small domain, of ClpB protein PP4_RS23415 SM00904 Riboflavin kinase PP4_RS23530 SM00382 ATPases associated with a variety of cellular activities PP4_RS23575 SM00387 Histidine kinase-like ATPases PP4_RS23575 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS23580 SM00382 ATPases associated with a variety of cellular activities PP4_RS23580 SM00448 cheY-homologous receiver domain PP4_RS23635 SM00749 bacterial OsmY and nodulation domain PP4_RS23645 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS23645 SM00322 K homology RNA-binding domain PP4_RS23650 SM01387 PP4_RS23650 PP4_RS23670 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS23710 SM00382 ATPases associated with a variety of cellular activities PP4_RS23720 SM01103 PP4_RS23720 PP4_RS23735 SM00851 MGS-like domain PP4_RS23735 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PP4_RS23740 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain PP4_RS23750 SM00271 DnaJ molecular chaperone homology domain PP4_RS23790 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS23790 SM00895 PP4_RS23790 PP4_RS23840 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS23855 SM00382 ATPases associated with a variety of cellular activities PP4_RS23875 SM00965 Secretin and TonB N terminus short domain PP4_RS23905 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PP4_RS23915 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS23915 SM00895 PP4_RS23915 PP4_RS23920 SM00829 Enoylreductase PP4_RS23955 SM00487 DEAD-like helicases superfamily PP4_RS23955 SM00490 helicase superfamily c-terminal domain PP4_RS23965 SM00479 PP4_RS23965 PP4_RS23990 SM00487 DEAD-like helicases superfamily PP4_RS23990 SM00490 helicase superfamily c-terminal domain PP4_RS24025 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS24085 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS24100 SM00487 DEAD-like helicases superfamily PP4_RS24100 SM00490 helicase superfamily c-terminal domain PP4_RS24100 SM00847 Helicase associated domain (HA2) Add an annotation PP4_RS24125 SM00490 helicase superfamily c-terminal domain PP4_RS24125 SM00847 Helicase associated domain (HA2) Add an annotation PP4_RS24170 SM00220 Serine/Threonine protein kinases, catalytic domain PP4_RS24205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS24225 SM00421 helix_turn_helix, Lux Regulon PP4_RS24240 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain PP4_RS24245 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS24270 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS24305 SM00421 helix_turn_helix, Lux Regulon PP4_RS24345 SM00487 DEAD-like helicases superfamily PP4_RS24345 SM00490 helicase superfamily c-terminal domain PP4_RS24345 SM00847 Helicase associated domain (HA2) Add an annotation PP4_RS24410 SM00344 helix_turn_helix ASNC type PP4_RS24445 SM00387 Histidine kinase-like ATPases PP4_RS24445 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS24465 SM00671 Sel1-like repeats. PP4_RS24485 SM01091 Transporter associated domain PP4_RS24535 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS24550 SM00936 Penicillin-binding protein 5, C-terminal domain PP4_RS24600 SM00014 Acid phosphatase homologues PP4_RS24605 SM00464 Found in ATP-dependent protease La (LON) PP4_RS24645 SM00798 AICARFT/IMPCHase bienzyme PP4_RS24645 SM00851 MGS-like domain PP4_RS24650 SM01209 PP4_RS24650 PP4_RS24650 SM01210 PP4_RS24650 PP4_RS24655 SM00387 Histidine kinase-like ATPases PP4_RS24655 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS24655 SM00448 cheY-homologous receiver domain PP4_RS24720 SM00244 prohibitin homologues PP4_RS24775 SM00382 ATPases associated with a variety of cellular activities PP4_RS24790 SM00271 DnaJ molecular chaperone homology domain PP4_RS24810 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS24855 SM00822 PP4_RS24855 PP4_RS24860 SM00382 ATPases associated with a variety of cellular activities PP4_RS24865 SM00382 ATPases associated with a variety of cellular activities PP4_RS24905 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS24915 SM00382 ATPases associated with a variety of cellular activities PP4_RS24940 SM00967 RNA 2'-O ribose methyltransferase substrate binding PP4_RS24945 SM00316 Ribosomal protein S1-like RNA-binding domain PP4_RS24945 SM00357 Cold shock protein domain PP4_RS24945 SM00955 PP4_RS24945 PP4_RS24975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS24975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS24980 SM00788 Adenylosuccinate synthetase PP4_RS24990 SM00244 prohibitin homologues PP4_RS24995 SM00244 prohibitin homologues PP4_RS25015 SM00853 MutL C terminal dimerisation domain PP4_RS25015 SM01340 PP4_RS25015 PP4_RS25020 SM00257 Lysin motif PP4_RS25020 SM00646 PP4_RS25020 PP4_RS25045 SM00479 PP4_RS25045 PP4_RS25070 SM00450 Rhodanese Homology Domain PP4_RS25095 SM00434 DNA Topoisomerase IV PP4_RS25110 SM00387 Histidine kinase-like ATPases PP4_RS25110 SM00433 TopoisomeraseII PP4_RS25195 SM00382 ATPases associated with a variety of cellular activities PP4_RS25290 SM00487 DEAD-like helicases superfamily PP4_RS25290 SM00490 helicase superfamily c-terminal domain PP4_RS25305 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS25325 SM00052 Putative diguanylate phosphodiesterase PP4_RS25325 SM00091 PAS domain PP4_RS25325 SM00267 diguanylate cyclase PP4_RS25325 SM00448 cheY-homologous receiver domain PP4_RS25350 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PP4_RS25355 SM00861 Transketolase, pyrimidine binding domain PP4_RS25360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor PP4_RS25370 SM00532 Ligase N family PP4_RS25385 SM00925 MltA specific insert domain PP4_RS25410 SM00996 S-adenosyl-L-homocysteine hydrolase PP4_RS25410 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PP4_RS25430 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS25435 SM00487 DEAD-like helicases superfamily PP4_RS25435 SM00490 helicase superfamily c-terminal domain PP4_RS25440 SM00867 YceI-like domain PP4_RS25480 SM00073 Histidine Phosphotransfer domain PP4_RS25480 SM00260 Two component signalling adaptor domain PP4_RS25480 SM00387 Histidine kinase-like ATPases PP4_RS25480 SM00448 cheY-homologous receiver domain PP4_RS25480 SM01231 PP4_RS25480 PP4_RS25485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS25490 SM00260 Two component signalling adaptor domain PP4_RS25495 SM00448 cheY-homologous receiver domain PP4_RS25500 SM00448 cheY-homologous receiver domain PP4_RS25520 SM00732 Likely ribonuclease with RNase H fold. PP4_RS25545 SM00382 ATPases associated with a variety of cellular activities PP4_RS25545 SM01086 C-terminal, D2-small domain, of ClpB protein PP4_RS25640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS25640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS25640 SM01358 PP4_RS25640 PP4_RS25645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). PP4_RS25645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain PP4_RS25645 SM01358 PP4_RS25645 PP4_RS25650 SM00382 ATPases associated with a variety of cellular activities PP4_RS25660 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS25660 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. PP4_RS25715 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS25715 SM00866 PP4_RS25715 PP4_RS25760 SM00981 PP4_RS25760 PP4_RS25765 SM01230 PP4_RS25765 PP4_RS25770 SM00091 PAS domain PP4_RS25770 SM00387 Histidine kinase-like ATPases PP4_RS25770 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS25775 SM00382 ATPases associated with a variety of cellular activities PP4_RS25775 SM00448 cheY-homologous receiver domain PP4_RS25800 SM00450 Rhodanese Homology Domain PP4_RS25815 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. PP4_RS25815 SM00245 tail specific protease PP4_RS25850 SM01091 Transporter associated domain PP4_RS25930 SM00965 Secretin and TonB N terminus short domain PP4_RS25955 SM00919 Malic enzyme, NAD binding domain PP4_RS25955 SM01274 PP4_RS25955 PP4_RS25960 SM00318 Staphylococcal nuclease homologues PP4_RS25970 SM00487 DEAD-like helicases superfamily PP4_RS25970 SM00490 helicase superfamily c-terminal domain PP4_RS25975 SM00836 DALR anticodon binding domain PP4_RS25975 SM01016 Arginyl tRNA synthetase N terminal dom PP4_RS25995 SM00382 ATPases associated with a variety of cellular activities PP4_RS26035 SM00729 Elongator protein 3, MiaB family, Radical SAM PP4_RS26080 SM00382 ATPases associated with a variety of cellular activities PP4_RS26085 SM00382 ATPases associated with a variety of cellular activities PP4_RS26085 SM00962 SRP54-type protein, GTPase domain PP4_RS26085 SM00963 SRP54-type protein, helical bundle domain PP4_RS26110 SM00450 Rhodanese Homology Domain PP4_RS26145 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain PP4_RS26145 SM01232 PP4_RS26145 PP4_RS26205 SM00382 ATPases associated with a variety of cellular activities PP4_RS26225 SM00422 helix_turn_helix, mercury resistance PP4_RS26250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. PP4_RS26320 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. PP4_RS26340 SM01266 PP4_RS26340 PP4_RS26350 SM00062 Bacterial periplasmic substrate-binding proteins PP4_RS26355 SM00382 ATPases associated with a variety of cellular activities PP4_RS26375 SM00382 ATPases associated with a variety of cellular activities PP4_RS26400 SM00382 ATPases associated with a variety of cellular activities PP4_RS26445 SM01321 PP4_RS26445 PP4_RS26460 SM00382 ATPases associated with a variety of cellular activities PP4_RS26480 SM01230 PP4_RS26480 PP4_RS26485 SM01230 PP4_RS26485 PP4_RS26500 SM01118 PP4_RS26500 PP4_RS26505 SM00344 helix_turn_helix ASNC type PP4_RS26565 SM01011 Aminopeptidase P, N-terminal domain PP4_RS26600 SM00382 ATPases associated with a variety of cellular activities PP4_RS26615 SM00829 Enoylreductase PP4_RS26645 SM00357 Cold shock protein domain PP4_RS26645 SM00382 ATPases associated with a variety of cellular activities PP4_RS26645 SM00959 Rho termination factor, N-terminal domain PP4_RS26700 SM01219 PP4_RS26700 PP4_RS26745 SM00938 Nitrogen regulatory protein P-II PP4_RS26765 SM00382 ATPases associated with a variety of cellular activities PP4_RS26805 SM00100 Cyclic nucleotide-monophosphate binding domain PP4_RS26825 SM01150 PP4_RS26825 PP4_RS26840 SM00052 Putative diguanylate phosphodiesterase PP4_RS26840 SM00267 diguanylate cyclase PP4_RS26865 SM00530 Helix-turn-helix XRE-family like proteins PP4_RS26870 SM01005 Alanine racemase, C-terminal domain PP4_RS26880 SM00344 helix_turn_helix ASNC type PP4_RS26900 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS26905 SM00155 Phospholipase D. Active site motifs. PP4_RS26985 SM00072 Guanylate kinase homologues. PP4_RS27000 SM01230 PP4_RS27000 PP4_RS27010 SM01409 PP4_RS27010 PP4_RS27015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. PP4_RS27015 SM00954 Region found in RelA / SpoT proteins PP4_RS27055 SM00487 DEAD-like helicases superfamily PP4_RS27055 SM00490 helicase superfamily c-terminal domain PP4_RS27070 SM00411 bacterial (prokaryotic) histone like domain PP4_RS27105 SM00448 cheY-homologous receiver domain PP4_RS27105 SM00862 Transcriptional regulatory protein, C terminal PP4_RS27110 SM00091 PAS domain PP4_RS27110 SM00387 Histidine kinase-like ATPases PP4_RS27110 SM00388 His Kinase A (phosphoacceptor) domain PP4_RS27115 SM00116 Domain in cystathionine beta-synthase and other proteins. PP4_RS27115 SM01091 Transporter associated domain PP4_RS27125 SM00448 cheY-homologous receiver domain PP4_RS27135 SM00382 ATPases associated with a variety of cellular activities PP4_RS27185 SM01001 AIR carboxylase PP4_RS27200 SM00342 helix_turn_helix, arabinose operon control protein PP4_RS27215 SM00345 helix_turn_helix gluconate operon transcriptional repressor PP4_RS27240 SM00878 Biotin carboxylase C-terminal domain PP4_RS27270 SM00978 PP4_RS27270 PP4_RS27315 SM00833 Cobalamin synthesis protein cobW C-terminal domain PP4_RS27335 SM00155 Phospholipase D. Active site motifs. PP4_RS27355 SM00420 helix_turn_helix, Deoxyribose operon repressor PP4_RS27355 SM01134 PP4_RS27355 PP4_RS27370 SM00382 ATPases associated with a variety of cellular activities PP4_RS27410 SM00470 ParB-like nuclease domain PP4_RS27425 SM01228 PP4_RS27425 PP4_RS27475 SM00823 Phosphopantetheine attachment site PP4_RS27475 SM00824 Thioesterase