YSA_RS00015	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS00025	SM00382	ATPases associated with a variety of cellular activities
YSA_RS00055	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS00105	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS00120	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS00140	SM00344	helix_turn_helix ASNC type
YSA_RS00165	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS00170	SM00422	helix_turn_helix, mercury resistance
YSA_RS00195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS00200	SM00387	Histidine kinase-like ATPases
YSA_RS00200	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS00200	SM00448	cheY-homologous receiver domain
YSA_RS00205	SM00387	Histidine kinase-like ATPases
YSA_RS00205	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS00205	SM00448	cheY-homologous receiver domain
YSA_RS00210	SM00822	YSA_RS00210
YSA_RS00225	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS00230	SM00421	helix_turn_helix, Lux Regulon
YSA_RS00230	SM00448	cheY-homologous receiver domain
YSA_RS00235	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS00235	SM00091	PAS domain
YSA_RS00235	SM00387	Histidine kinase-like ATPases
YSA_RS00235	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS00265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS00265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS00300	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS00325	SM00564	beta-propeller repeat
YSA_RS00370	SM00965	Secretin and TonB N terminus short domain
YSA_RS00400	SM00052	Putative diguanylate phosphodiesterase
YSA_RS00400	SM00267	diguanylate cyclase
YSA_RS00455	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS00475	SM00382	ATPases associated with a variety of cellular activities
YSA_RS00480	SM00450	Rhodanese Homology Domain
YSA_RS00485	SM00421	helix_turn_helix, Lux Regulon
YSA_RS00485	SM00448	cheY-homologous receiver domain
YSA_RS00490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS00490	SM00387	Histidine kinase-like ATPases
YSA_RS00490	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS00490	SM00448	cheY-homologous receiver domain
YSA_RS00495	SM00897	FIST N domain
YSA_RS00495	SM01204	YSA_RS00495
YSA_RS00515	SM00382	ATPases associated with a variety of cellular activities
YSA_RS00550	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS00575	SM00344	helix_turn_helix ASNC type
YSA_RS00595	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS00615	SM00831	Cation transporter/ATPase, N-terminus
YSA_RS00620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS00620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS00625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS00645	SM01012	YSA_RS00645
YSA_RS00655	SM00382	ATPases associated with a variety of cellular activities
YSA_RS00655	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS00665	SM01130	YSA_RS00665
YSA_RS00670	SM00028	Tetratricopeptide repeats
YSA_RS00715	SM00382	ATPases associated with a variety of cellular activities
YSA_RS00810	SM00346	helix_turn_helix isocitrate lyase regulation
YSA_RS00850	SM00346	helix_turn_helix isocitrate lyase regulation
YSA_RS00860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS00860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
YSA_RS00875	SM00421	helix_turn_helix, Lux Regulon
YSA_RS01000	SM00382	ATPases associated with a variety of cellular activities
YSA_RS01015	SM00091	PAS domain
YSA_RS01015	SM00267	diguanylate cyclase
YSA_RS01090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS01195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
YSA_RS01200	SM00965	Secretin and TonB N terminus short domain
YSA_RS01290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS01290	SM00267	diguanylate cyclase
YSA_RS01335	SM00344	helix_turn_helix ASNC type
YSA_RS01360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS01365	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS01380	SM00382	ATPases associated with a variety of cellular activities
YSA_RS01435	SM00226	Low molecular weight phosphatase family
YSA_RS01440	SM00226	Low molecular weight phosphatase family
YSA_RS01455	SM00404	Protein tyrosine phosphatase, catalytic domain motif
YSA_RS01460	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YSA_RS01505	SM00091	PAS domain
YSA_RS01505	SM00382	ATPases associated with a variety of cellular activities
YSA_RS01510	SM00849	Metallo-beta-lactamase superfamily
YSA_RS01540	SM00450	Rhodanese Homology Domain
YSA_RS01545	SM00450	Rhodanese Homology Domain
YSA_RS01575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS01575	SM00895	YSA_RS01575
YSA_RS01665	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS01670	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
YSA_RS01670	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
YSA_RS01670	SM00493	YSA_RS01670
YSA_RS01870	SM00327	von Willebrand factor (vWF) type A domain
YSA_RS01970	SM00422	helix_turn_helix, mercury resistance
YSA_RS01975	SM00411	bacterial (prokaryotic) histone like domain
YSA_RS01980	SM00873	B3/4 domain
YSA_RS01980	SM00874	tRNA synthetase B5 domain
YSA_RS01980	SM00896	Ferredoxin-fold anticodon binding domain
YSA_RS02005	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
YSA_RS02015	SM00357	Cold shock protein domain
YSA_RS02045	SM00354	helix_turn _helix lactose operon repressor
YSA_RS02055	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02065	SM00870	YSA_RS02065
YSA_RS02070	SM00091	PAS domain
YSA_RS02070	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02075	SM01116	YSA_RS02075
YSA_RS02190	SM00953	YSA_RS02190
YSA_RS02210	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS02230	SM00829	Enoylreductase
YSA_RS02235	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS02280	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02295	SM00267	diguanylate cyclase
YSA_RS02345	SM00448	cheY-homologous receiver domain
YSA_RS02345	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS02350	SM00387	Histidine kinase-like ATPases
YSA_RS02385	SM00369	Leucine-rich repeats, typical (most populated) subfamily
YSA_RS02400	SM00486	DNA polymerase type-B family
YSA_RS02450	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS02485	SM01018	B12 binding domain
YSA_RS02510	SM00369	Leucine-rich repeats, typical (most populated) subfamily
YSA_RS02530	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS02535	SM00631	YSA_RS02535
YSA_RS02540	SM00972	Spore Coat Protein U domain
YSA_RS02555	SM00972	Spore Coat Protein U domain
YSA_RS02560	SM00972	Spore Coat Protein U domain
YSA_RS02565	SM00972	Spore Coat Protein U domain
YSA_RS02570	SM00972	Spore Coat Protein U domain
YSA_RS02575	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS02575	SM00387	Histidine kinase-like ATPases
YSA_RS02575	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS02580	SM00448	cheY-homologous receiver domain
YSA_RS02585	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS02585	SM00091	PAS domain
YSA_RS02585	SM00387	Histidine kinase-like ATPases
YSA_RS02585	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS02585	SM00448	cheY-homologous receiver domain
YSA_RS02615	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS02620	SM00387	Histidine kinase-like ATPases
YSA_RS02625	SM00448	cheY-homologous receiver domain
YSA_RS02625	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS02690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS02690	SM00895	YSA_RS02690
YSA_RS02765	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS02800	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS02815	SM00880	YSA_RS02815
YSA_RS02835	SM00411	bacterial (prokaryotic) histone like domain
YSA_RS02840	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02840	SM00464	Found in ATP-dependent protease La (LON)
YSA_RS02845	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02845	SM00994	ClpX C4-type zinc finger
YSA_RS02845	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS02910	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02915	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02920	SM00382	ATPases associated with a variety of cellular activities
YSA_RS02925	SM00052	Putative diguanylate phosphodiesterase
YSA_RS02925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS02925	SM00091	PAS domain
YSA_RS02925	SM00267	diguanylate cyclase
YSA_RS02930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS02935	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS02945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS02945	SM00895	YSA_RS02945
YSA_RS02950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS02950	SM00895	YSA_RS02950
YSA_RS02970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS02970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS02990	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS03000	SM00855	Phosphoglycerate mutase family
YSA_RS03020	SM00382	ATPases associated with a variety of cellular activities
YSA_RS03080	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS03090	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS03170	SM00822	YSA_RS03170
YSA_RS03180	SM00369	Leucine-rich repeats, typical (most populated) subfamily
YSA_RS03185	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS03270	SM00965	Secretin and TonB N terminus short domain
YSA_RS03280	SM00769	Water Stress and Hypersensitive response
YSA_RS03310	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
YSA_RS03310	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
YSA_RS03315	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
YSA_RS03325	SM00945	ProQ/FINO family
YSA_RS03330	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS03345	SM01230	YSA_RS03345
YSA_RS03350	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS03365	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS03365	SM00871	Bacterial transcription activator, effector binding domain
YSA_RS03385	SM00830	Chorismate mutase type II
YSA_RS03415	SM00331	Sigma factor PP2C-like phosphatases
YSA_RS03415	SM00448	cheY-homologous receiver domain
YSA_RS03450	SM00448	cheY-homologous receiver domain
YSA_RS03450	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS03455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS03455	SM00387	Histidine kinase-like ATPases
YSA_RS03455	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS03465	SM00382	ATPases associated with a variety of cellular activities
YSA_RS03495	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YSA_RS03500	SM00487	DEAD-like helicases superfamily
YSA_RS03500	SM00490	helicase superfamily c-terminal domain
YSA_RS03500	SM00982	YSA_RS03500
YSA_RS03500	SM01058	CarD-like/TRCF domain
YSA_RS03510	SM00487	DEAD-like helicases superfamily
YSA_RS03510	SM00490	helicase superfamily c-terminal domain
YSA_RS03545	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
YSA_RS03545	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
YSA_RS03545	SM00493	YSA_RS03545
YSA_RS03575	SM00382	ATPases associated with a variety of cellular activities
YSA_RS03590	SM00260	Two component signalling adaptor domain
YSA_RS03590	SM00448	cheY-homologous receiver domain
YSA_RS03605	SM00421	helix_turn_helix, Lux Regulon
YSA_RS03605	SM00448	cheY-homologous receiver domain
YSA_RS03610	SM00046	Diacylglycerol kinase catalytic domain (presumed)
YSA_RS03620	SM00852	Probable molybdopterin binding domain
YSA_RS03625	SM00852	Probable molybdopterin binding domain
YSA_RS03640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS03640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS03645	SM00382	ATPases associated with a variety of cellular activities
YSA_RS03670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS03715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
YSA_RS03720	SM00421	helix_turn_helix, Lux Regulon
YSA_RS03720	SM00448	cheY-homologous receiver domain
YSA_RS03725	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS03725	SM00091	PAS domain
YSA_RS03725	SM00387	Histidine kinase-like ATPases
YSA_RS03725	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS03725	SM00448	cheY-homologous receiver domain
YSA_RS03745	SM00981	YSA_RS03745
YSA_RS03760	SM00448	cheY-homologous receiver domain
YSA_RS03760	SM01012	YSA_RS03760
YSA_RS03770	SM00220	Serine/Threonine protein kinases, catalytic domain
YSA_RS03770	SM00331	Sigma factor PP2C-like phosphatases
YSA_RS03770	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
YSA_RS03855	SM00965	Secretin and TonB N terminus short domain
YSA_RS03880	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS03890	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS03910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS03910	SM00866	YSA_RS03910
YSA_RS03925	SM00422	helix_turn_helix, mercury resistance
YSA_RS04000	SM00849	Metallo-beta-lactamase superfamily
YSA_RS04045	SM01007	Class II Aldolase and Adducin N-terminal domain
YSA_RS04050	SM01130	YSA_RS04050
YSA_RS04085	SM00327	von Willebrand factor (vWF) type A domain
YSA_RS04090	SM00028	Tetratricopeptide repeats
YSA_RS04190	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS04200	SM00829	Enoylreductase
YSA_RS04205	SM00822	YSA_RS04205
YSA_RS04215	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS04225	SM00822	YSA_RS04225
YSA_RS04235	SM00822	YSA_RS04235
YSA_RS04255	SM00387	Histidine kinase-like ATPases
YSA_RS04255	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS04255	SM00448	cheY-homologous receiver domain
YSA_RS04260	SM00052	Putative diguanylate phosphodiesterase
YSA_RS04260	SM00448	cheY-homologous receiver domain
YSA_RS04265	SM00387	Histidine kinase-like ATPases
YSA_RS04265	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS04265	SM00448	cheY-homologous receiver domain
YSA_RS04270	SM00421	helix_turn_helix, Lux Regulon
YSA_RS04270	SM00448	cheY-homologous receiver domain
YSA_RS04295	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS04375	SM00859	Semialdehyde dehydrogenase, NAD binding domain
YSA_RS04385	SM00859	Semialdehyde dehydrogenase, NAD binding domain
YSA_RS04390	SM01329	YSA_RS04390
YSA_RS04415	SM00052	Putative diguanylate phosphodiesterase
YSA_RS04415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS04415	SM00091	PAS domain
YSA_RS04415	SM00267	diguanylate cyclase
YSA_RS04490	SM00487	DEAD-like helicases superfamily
YSA_RS04490	SM00490	helicase superfamily c-terminal domain
YSA_RS04520	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS04555	SM00825	Beta-ketoacyl synthase
YSA_RS04565	SM00822	YSA_RS04565
YSA_RS04570	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
YSA_RS04605	SM00363	S4 RNA-binding domain
YSA_RS04610	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS04620	SM00226	Low molecular weight phosphatase family
YSA_RS04650	SM00849	Metallo-beta-lactamase superfamily
YSA_RS04660	SM00382	ATPases associated with a variety of cellular activities
YSA_RS04695	SM00869	Autotransporter beta-domain
YSA_RS04785	SM00387	Histidine kinase-like ATPases
YSA_RS04785	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS04785	SM00448	cheY-homologous receiver domain
YSA_RS04820	SM00487	DEAD-like helicases superfamily
YSA_RS04820	SM00490	helicase superfamily c-terminal domain
YSA_RS04855	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS04865	SM00841	Elongation factor P, C-terminal
YSA_RS04865	SM01185	YSA_RS04865
YSA_RS04890	SM00822	YSA_RS04890
YSA_RS04925	SM00563	Phosphate acyltransferases
YSA_RS04975	SM00248	ankyrin repeats
YSA_RS05025	SM00463	Small MutS-related domain
YSA_RS05050	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS05050	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS05050	SM01358	YSA_RS05050
YSA_RS05065	SM00829	Enoylreductase
YSA_RS05070	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
YSA_RS05105	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS05120	SM00822	YSA_RS05120
YSA_RS05155	SM00382	ATPases associated with a variety of cellular activities
YSA_RS05235	SM00382	ATPases associated with a variety of cellular activities
YSA_RS05260	SM00849	Metallo-beta-lactamase superfamily
YSA_RS05260	SM01027	Beta-Casp domain
YSA_RS05270	SM00411	bacterial (prokaryotic) histone like domain
YSA_RS05275	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS05290	SM00830	Chorismate mutase type II
YSA_RS05300	SM00434	DNA Topoisomerase IV
YSA_RS05330	SM00052	Putative diguanylate phosphodiesterase
YSA_RS05330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS05330	SM00091	PAS domain
YSA_RS05330	SM00267	diguanylate cyclase
YSA_RS05335	SM00382	ATPases associated with a variety of cellular activities
YSA_RS05345	SM00450	Rhodanese Homology Domain
YSA_RS05405	SM00822	YSA_RS05405
YSA_RS05515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS05515	SM00866	YSA_RS05515
YSA_RS05540	SM00382	ATPases associated with a variety of cellular activities
YSA_RS05550	SM00829	Enoylreductase
YSA_RS05555	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
YSA_RS05555	SM00245	tail specific protease
YSA_RS05560	SM00052	Putative diguanylate phosphodiesterase
YSA_RS05570	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS05595	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS05610	SM00822	YSA_RS05610
YSA_RS05630	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
YSA_RS05670	SM00563	Phosphate acyltransferases
YSA_RS05685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS05685	SM00866	YSA_RS05685
YSA_RS05695	SM00387	Histidine kinase-like ATPases
YSA_RS05695	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS05695	SM00448	cheY-homologous receiver domain
YSA_RS05705	SM00671	Sel1-like repeats.
YSA_RS05745	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS05760	SM00855	Phosphoglycerate mutase family
YSA_RS05880	SM00954	Region found in RelA / SpoT proteins
YSA_RS05895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS05895	SM00387	Histidine kinase-like ATPases
YSA_RS05895	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS05900	SM00448	cheY-homologous receiver domain
YSA_RS05900	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS05905	SM00073	Histidine Phosphotransfer domain
YSA_RS05905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS05905	SM00387	Histidine kinase-like ATPases
YSA_RS05905	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS05905	SM00448	cheY-homologous receiver domain
YSA_RS05960	SM00731	SprT homologues.
YSA_RS05980	SM00421	helix_turn_helix, Lux Regulon
YSA_RS05980	SM00448	cheY-homologous receiver domain
YSA_RS05985	SM01144	YSA_RS05985
YSA_RS06010	SM00382	ATPases associated with a variety of cellular activities
YSA_RS06025	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
YSA_RS06025	SM00534	ATPase domain of DNA mismatch repair MUTS family
YSA_RS06040	SM00257	Lysin motif
YSA_RS06090	SM01192	YSA_RS06090
YSA_RS06090	SM01193	YSA_RS06090
YSA_RS06105	SM00977	TilS substrate C-terminal domain
YSA_RS06115	SM00481	DNA polymerase alpha chain like domain
YSA_RS06145	SM00935	Outer membrane protein (OmpH-like)
YSA_RS06155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
YSA_RS06200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
YSA_RS06260	SM00357	Cold shock protein domain
YSA_RS06265	SM00563	Phosphate acyltransferases
YSA_RS06365	SM01154	YSA_RS06365
YSA_RS06385	SM00937	YSA_RS06385
YSA_RS06390	SM00267	diguanylate cyclase
YSA_RS06390	SM00448	cheY-homologous receiver domain
YSA_RS06395	SM00448	cheY-homologous receiver domain
YSA_RS06400	SM00073	Histidine Phosphotransfer domain
YSA_RS06400	SM00260	Two component signalling adaptor domain
YSA_RS06400	SM00387	Histidine kinase-like ATPases
YSA_RS06400	SM00448	cheY-homologous receiver domain
YSA_RS06405	SM00260	Two component signalling adaptor domain
YSA_RS06410	SM00138	Methyltransferase, chemotaxis proteins 
YSA_RS06415	SM00260	Two component signalling adaptor domain
YSA_RS06420	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS06420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS06435	SM00382	ATPases associated with a variety of cellular activities
YSA_RS06470	SM01322	YSA_RS06470
YSA_RS06545	SM00382	ATPases associated with a variety of cellular activities
YSA_RS06545	SM00962	SRP54-type protein, GTPase domain
YSA_RS06545	SM00963	SRP54-type protein, helical bundle domain
YSA_RS06555	SM01091	Transporter associated domain
YSA_RS06605	SM00912	haemagglutination activity domain
YSA_RS06630	SM00564	beta-propeller repeat
YSA_RS06640	SM00382	ATPases associated with a variety of cellular activities
YSA_RS06640	SM00464	Found in ATP-dependent protease La (LON)
YSA_RS06665	SM00448	cheY-homologous receiver domain
YSA_RS06665	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS06670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS06670	SM00387	Histidine kinase-like ATPases
YSA_RS06670	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS06690	SM00358	Double-stranded RNA binding motif
YSA_RS06690	SM00535	Ribonuclease III family
YSA_RS06705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
YSA_RS06750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS06750	SM00387	Histidine kinase-like ATPases
YSA_RS06750	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS06755	SM00448	cheY-homologous receiver domain
YSA_RS06755	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS06790	SM00986	Uracil DNA glycosylase superfamily
YSA_RS06790	SM00987	UreE urease accessory protein, C-terminal domain 
YSA_RS06805	SM00267	diguanylate cyclase
YSA_RS06815	SM00363	S4 RNA-binding domain
YSA_RS06850	SM01217	YSA_RS06850
YSA_RS06855	SM00387	Histidine kinase-like ATPases
YSA_RS06855	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS06860	SM00382	ATPases associated with a variety of cellular activities
YSA_RS06860	SM00448	cheY-homologous receiver domain
YSA_RS06880	SM00903	Flavin reductase like domain
YSA_RS06895	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS06970	SM00998	Adenylosuccinate lyase C-terminus
YSA_RS06990	SM00346	helix_turn_helix isocitrate lyase regulation
YSA_RS07010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS07010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS07065	SM00883	Chaperonin 10 Kd subunit
YSA_RS07115	SM00091	PAS domain
YSA_RS07115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS07115	SM00387	Histidine kinase-like ATPases
YSA_RS07115	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS07140	SM00957	SecA DEAD-like domain
YSA_RS07140	SM00958	SecA preprotein cross-linking domain
YSA_RS07155	SM00864	Tubulin/FtsZ family, GTPase domain
YSA_RS07155	SM00865	Tubulin/FtsZ family, C-terminal domain
YSA_RS07160	SM00842	Cell division protein FtsA
YSA_RS07250	SM00749	bacterial OsmY and nodulation domain
YSA_RS07295	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS07325	SM00344	helix_turn_helix ASNC type
YSA_RS07350	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
YSA_RS07355	SM00382	ATPases associated with a variety of cellular activities
YSA_RS07370	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS07380	SM00487	DEAD-like helicases superfamily
YSA_RS07380	SM00490	helicase superfamily c-terminal domain
YSA_RS07400	SM00670	Large family of predicted nucleotide-binding domains
YSA_RS07415	SM00984	UDP binding domain
YSA_RS07430	SM00671	Sel1-like repeats.
YSA_RS07440	SM00710	Parallel beta-helix repeats
YSA_RS07440	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
YSA_RS07485	SM00822	YSA_RS07485
YSA_RS07550	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS07555	SM00965	Secretin and TonB N terminus short domain
YSA_RS07615	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
YSA_RS07640	SM00346	helix_turn_helix isocitrate lyase regulation
YSA_RS07675	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS07675	SM00091	PAS domain
YSA_RS07685	SM00422	helix_turn_helix, mercury resistance
YSA_RS07735	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS07760	SM00382	ATPases associated with a variety of cellular activities
YSA_RS07775	SM00421	helix_turn_helix, Lux Regulon
YSA_RS07830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS07830	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS07830	SM01358	YSA_RS07830
YSA_RS07900	SM00267	diguanylate cyclase
YSA_RS08010	SM00382	ATPases associated with a variety of cellular activities
YSA_RS08055	SM00387	Histidine kinase-like ATPases
YSA_RS08055	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS08060	SM00382	ATPases associated with a variety of cellular activities
YSA_RS08060	SM00448	cheY-homologous receiver domain
YSA_RS08115	SM00749	bacterial OsmY and nodulation domain
YSA_RS08120	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS08120	SM00322	K homology RNA-binding domain
YSA_RS08125	SM01387	YSA_RS08125
YSA_RS08145	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS08185	SM00382	ATPases associated with a variety of cellular activities
YSA_RS08195	SM01103	YSA_RS08195
YSA_RS08210	SM00851	MGS-like domain
YSA_RS08210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
YSA_RS08215	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
YSA_RS08225	SM00271	DnaJ molecular chaperone homology domain
YSA_RS08265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS08265	SM00895	YSA_RS08265
YSA_RS08295	SM00487	DEAD-like helicases superfamily
YSA_RS08295	SM00490	helicase superfamily c-terminal domain
YSA_RS08315	SM00857	Resolvase, N terminal domain
YSA_RS08320	SM00422	helix_turn_helix, mercury resistance
YSA_RS08345	SM00422	helix_turn_helix, mercury resistance
YSA_RS08355	SM00857	Resolvase, N terminal domain
YSA_RS08365	SM00344	helix_turn_helix ASNC type
YSA_RS08385	SM00857	Resolvase, N terminal domain
YSA_RS08440	SM00052	Putative diguanylate phosphodiesterase
YSA_RS08440	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS08440	SM00267	diguanylate cyclase
YSA_RS08445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS08505	SM00487	DEAD-like helicases superfamily
YSA_RS08510	SM00487	DEAD-like helicases superfamily
YSA_RS08510	SM00490	helicase superfamily c-terminal domain
YSA_RS08555	SM00965	Secretin and TonB N terminus short domain
YSA_RS08595	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YSA_RS08605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS08605	SM00895	YSA_RS08605
YSA_RS08610	SM00829	Enoylreductase
YSA_RS08630	SM00855	Phosphoglycerate mutase family
YSA_RS08645	SM00487	DEAD-like helicases superfamily
YSA_RS08645	SM00490	helicase superfamily c-terminal domain
YSA_RS08655	SM00479	YSA_RS08655
YSA_RS08680	SM00487	DEAD-like helicases superfamily
YSA_RS08680	SM00490	helicase superfamily c-terminal domain
YSA_RS08680	SM00847	Helicase associated domain (HA2)  Add an annotation
YSA_RS08700	SM00344	helix_turn_helix ASNC type
YSA_RS08725	SM00387	Histidine kinase-like ATPases
YSA_RS08725	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS08745	SM00671	Sel1-like repeats.
YSA_RS08765	SM01091	Transporter associated domain
YSA_RS08815	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS08830	SM00936	Penicillin-binding protein 5, C-terminal domain 
YSA_RS08885	SM00014	Acid phosphatase homologues
YSA_RS08890	SM00464	Found in ATP-dependent protease La (LON)
YSA_RS08930	SM00798	AICARFT/IMPCHase bienzyme
YSA_RS08930	SM00851	MGS-like domain
YSA_RS08935	SM01209	YSA_RS08935
YSA_RS08935	SM01210	YSA_RS08935
YSA_RS08940	SM00387	Histidine kinase-like ATPases
YSA_RS08940	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS08940	SM00448	cheY-homologous receiver domain
YSA_RS09005	SM00244	prohibitin homologues
YSA_RS09060	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09075	SM00271	DnaJ molecular chaperone homology domain
YSA_RS09095	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS09145	SM00822	YSA_RS09145
YSA_RS09150	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09155	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09195	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS09225	SM00967	RNA 2'-O ribose methyltransferase substrate binding
YSA_RS09230	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS09230	SM00357	Cold shock protein domain
YSA_RS09230	SM00955	YSA_RS09230
YSA_RS09260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS09260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS09265	SM00788	Adenylosuccinate synthetase
YSA_RS09275	SM00244	prohibitin homologues
YSA_RS09280	SM00244	prohibitin homologues
YSA_RS09300	SM00853	MutL C terminal dimerisation domain
YSA_RS09300	SM01340	YSA_RS09300
YSA_RS09305	SM00257	Lysin motif
YSA_RS09305	SM00646	YSA_RS09305
YSA_RS09330	SM00479	YSA_RS09330
YSA_RS09355	SM00450	Rhodanese Homology Domain
YSA_RS09380	SM00434	DNA Topoisomerase IV
YSA_RS09395	SM00387	Histidine kinase-like ATPases
YSA_RS09395	SM00433	TopoisomeraseII
YSA_RS09475	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09565	SM00487	DEAD-like helicases superfamily
YSA_RS09565	SM00490	helicase superfamily c-terminal domain
YSA_RS09580	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS09600	SM00052	Putative diguanylate phosphodiesterase
YSA_RS09600	SM00091	PAS domain
YSA_RS09600	SM00267	diguanylate cyclase
YSA_RS09600	SM00448	cheY-homologous receiver domain
YSA_RS09625	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YSA_RS09630	SM00861	Transketolase, pyrimidine binding domain
YSA_RS09635	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS09645	SM00532	Ligase N family
YSA_RS09660	SM00925	MltA specific insert domain
YSA_RS09695	SM00996	S-adenosyl-L-homocysteine hydrolase
YSA_RS09695	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
YSA_RS09710	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS09715	SM00487	DEAD-like helicases superfamily
YSA_RS09715	SM00490	helicase superfamily c-terminal domain
YSA_RS09720	SM00867	YceI-like domain 
YSA_RS09760	SM00073	Histidine Phosphotransfer domain
YSA_RS09760	SM00260	Two component signalling adaptor domain
YSA_RS09760	SM00387	Histidine kinase-like ATPases
YSA_RS09760	SM00448	cheY-homologous receiver domain
YSA_RS09760	SM01231	YSA_RS09760
YSA_RS09765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS09770	SM00260	Two component signalling adaptor domain
YSA_RS09775	SM00448	cheY-homologous receiver domain
YSA_RS09780	SM00448	cheY-homologous receiver domain
YSA_RS09800	SM00732	Likely ribonuclease with RNase H fold.
YSA_RS09825	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09825	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS09920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS09920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS09920	SM01358	YSA_RS09920
YSA_RS09925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS09925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS09925	SM01358	YSA_RS09925
YSA_RS09930	SM00382	ATPases associated with a variety of cellular activities
YSA_RS09940	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS09940	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
YSA_RS09995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS09995	SM00866	YSA_RS09995
YSA_RS10050	SM00981	YSA_RS10050
YSA_RS10055	SM01230	YSA_RS10055
YSA_RS10060	SM00830	Chorismate mutase type II
YSA_RS10065	SM00091	PAS domain
YSA_RS10065	SM00387	Histidine kinase-like ATPases
YSA_RS10065	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS10070	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10070	SM00448	cheY-homologous receiver domain
YSA_RS10095	SM00450	Rhodanese Homology Domain
YSA_RS10110	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
YSA_RS10110	SM00245	tail specific protease
YSA_RS10150	SM01091	Transporter associated domain
YSA_RS10230	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10285	SM00965	Secretin and TonB N terminus short domain
YSA_RS10310	SM00919	Malic enzyme, NAD binding domain
YSA_RS10310	SM01274	YSA_RS10310
YSA_RS10315	SM00318	Staphylococcal nuclease homologues
YSA_RS10325	SM00487	DEAD-like helicases superfamily
YSA_RS10325	SM00490	helicase superfamily c-terminal domain
YSA_RS10330	SM00836	DALR anticodon binding domain
YSA_RS10330	SM01016	Arginyl tRNA synthetase N terminal dom
YSA_RS10350	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10390	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS10435	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10440	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10440	SM00962	SRP54-type protein, GTPase domain
YSA_RS10440	SM00963	SRP54-type protein, helical bundle domain
YSA_RS10475	SM00450	Rhodanese Homology Domain
YSA_RS10510	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
YSA_RS10510	SM01232	YSA_RS10510
YSA_RS10530	SM00506	Appr-1"-p processing enzyme
YSA_RS10580	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10595	SM00422	helix_turn_helix, mercury resistance
YSA_RS10620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS10700	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
YSA_RS10720	SM01266	YSA_RS10720
YSA_RS10735	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10745	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10785	SM01321	YSA_RS10785
YSA_RS10800	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10820	SM01230	YSA_RS10820
YSA_RS10825	SM01230	YSA_RS10825
YSA_RS10840	SM01118	YSA_RS10840
YSA_RS10845	SM00344	helix_turn_helix ASNC type
YSA_RS10905	SM01011	Aminopeptidase P, N-terminal domain
YSA_RS10940	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10975	SM00357	Cold shock protein domain
YSA_RS10975	SM00382	ATPases associated with a variety of cellular activities
YSA_RS10975	SM00959	Rho termination factor, N-terminal domain
YSA_RS11030	SM01219	YSA_RS11030
YSA_RS11075	SM00938	Nitrogen regulatory protein P-II
YSA_RS11095	SM00382	ATPases associated with a variety of cellular activities
YSA_RS11100	SM00448	cheY-homologous receiver domain
YSA_RS11105	SM00421	helix_turn_helix, Lux Regulon
YSA_RS11105	SM00448	cheY-homologous receiver domain
YSA_RS11105	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS11110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS11110	SM00220	Serine/Threonine protein kinases, catalytic domain
YSA_RS11110	SM00387	Histidine kinase-like ATPases
YSA_RS11110	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS11120	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS11125	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS11180	SM00100	Cyclic nucleotide-monophosphate binding domain
YSA_RS11200	SM01150	YSA_RS11200
YSA_RS11215	SM00052	Putative diguanylate phosphodiesterase
YSA_RS11215	SM00267	diguanylate cyclase
YSA_RS11240	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS11245	SM01005	Alanine racemase, C-terminal domain
YSA_RS11255	SM00344	helix_turn_helix ASNC type
YSA_RS11275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS11280	SM00155	Phospholipase D. Active site motifs.
YSA_RS11340	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS11365	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
YSA_RS11410	SM00448	cheY-homologous receiver domain
YSA_RS11410	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS11415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS11415	SM00387	Histidine kinase-like ATPases
YSA_RS11415	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS11490	SM00448	cheY-homologous receiver domain
YSA_RS11490	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS11575	SM00072	Guanylate kinase homologues.
YSA_RS11595	SM01230	YSA_RS11595
YSA_RS11605	SM01409	YSA_RS11605
YSA_RS11610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
YSA_RS11610	SM00954	Region found in RelA / SpoT proteins
YSA_RS11650	SM00487	DEAD-like helicases superfamily
YSA_RS11650	SM00490	helicase superfamily c-terminal domain
YSA_RS11665	SM00411	bacterial (prokaryotic) histone like domain
YSA_RS11695	SM00448	cheY-homologous receiver domain
YSA_RS11695	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS11700	SM00387	Histidine kinase-like ATPases
YSA_RS11700	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS11705	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS11705	SM01091	Transporter associated domain
YSA_RS11715	SM00448	cheY-homologous receiver domain
YSA_RS11725	SM00382	ATPases associated with a variety of cellular activities
YSA_RS11775	SM01001	AIR carboxylase
YSA_RS11795	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS11810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS11835	SM00878	Biotin carboxylase C-terminal domain
YSA_RS11860	SM00978	YSA_RS11860
YSA_RS11890	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS11900	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS11915	SM00155	Phospholipase D. Active site motifs.
YSA_RS11930	SM00861	Transketolase, pyrimidine binding domain
YSA_RS11945	SM00822	YSA_RS11945
YSA_RS11955	SM00671	Sel1-like repeats.
YSA_RS12010	SM00420	helix_turn_helix, Deoxyribose operon repressor
YSA_RS12010	SM01134	YSA_RS12010
YSA_RS12025	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12065	SM00470	ParB-like nuclease domain
YSA_RS12080	SM01228	YSA_RS12080
YSA_RS12100	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12100	SM00760	Bacterial dnaA protein helix-turn-helix domain
YSA_RS12105	SM00480	DNA polymerase III beta subunit
YSA_RS12115	SM00387	Histidine kinase-like ATPases
YSA_RS12115	SM00433	TopoisomeraseII
YSA_RS12125	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12130	SM00849	Metallo-beta-lactamase superfamily
YSA_RS12160	SM00563	Phosphate acyltransferases
YSA_RS12190	SM00028	Tetratricopeptide repeats
YSA_RS12230	SM00829	Enoylreductase
YSA_RS12360	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS12365	SM00947	Carbonic anhydrase
YSA_RS12440	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12440	SM00930	YSA_RS12440
YSA_RS12445	SM01060	YSA_RS12445
YSA_RS12460	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12485	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
YSA_RS12485	SM00474	3'-5' exonuclease
YSA_RS12485	SM00475	5'-3' exonuclease
YSA_RS12485	SM00482	DNA polymerase A domain
YSA_RS12515	SM00267	diguanylate cyclase
YSA_RS12520	SM00644	YSA_RS12520
YSA_RS12525	SM00052	Putative diguanylate phosphodiesterase
YSA_RS12530	SM00091	PAS domain
YSA_RS12530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS12530	SM00387	Histidine kinase-like ATPases
YSA_RS12530	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS12535	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12535	SM00448	cheY-homologous receiver domain
YSA_RS12540	SM00749	bacterial OsmY and nodulation domain
YSA_RS12580	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12660	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
YSA_RS12660	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
YSA_RS12700	SM00965	Secretin and TonB N terminus short domain
YSA_RS12715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS12715	SM00895	YSA_RS12715
YSA_RS12725	SM00052	Putative diguanylate phosphodiesterase
YSA_RS12725	SM00267	diguanylate cyclase
YSA_RS12725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS12735	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12760	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12775	SM00671	Sel1-like repeats.
YSA_RS12780	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS12830	SM00448	cheY-homologous receiver domain
YSA_RS12830	SM00850	LytTr DNA-binding domain
YSA_RS12880	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12895	SM00244	prohibitin homologues
YSA_RS12920	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS12945	SM00448	cheY-homologous receiver domain
YSA_RS12950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS12950	SM00091	PAS domain
YSA_RS12950	SM00267	diguanylate cyclase
YSA_RS12960	SM00052	Putative diguanylate phosphodiesterase
YSA_RS12960	SM00091	PAS domain
YSA_RS12960	SM00267	diguanylate cyclase
YSA_RS12970	SM00382	ATPases associated with a variety of cellular activities
YSA_RS12970	SM00930	YSA_RS12970
YSA_RS12995	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13005	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
YSA_RS13030	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13035	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13055	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13070	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13095	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS13095	SM00732	Likely ribonuclease with RNase H fold.
YSA_RS13100	SM00448	cheY-homologous receiver domain
YSA_RS13100	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS13105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS13105	SM00387	Histidine kinase-like ATPases
YSA_RS13105	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS13120	SM00363	S4 RNA-binding domain
YSA_RS13160	SM00257	Lysin motif
YSA_RS13185	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13185	SM00448	cheY-homologous receiver domain
YSA_RS13190	SM00387	Histidine kinase-like ATPases
YSA_RS13190	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS13220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS13220	SM00387	Histidine kinase-like ATPases
YSA_RS13220	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS13225	SM00448	cheY-homologous receiver domain
YSA_RS13225	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS13245	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS13330	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13335	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13365	SM00478	endonuclease III
YSA_RS13405	SM00382	ATPases associated with a variety of cellular activities
YSA_RS13425	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS13460	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS13485	SM00989	YSA_RS13485
YSA_RS13500	SM00893	Electron transfer flavoprotein domain
YSA_RS13505	SM00893	Electron transfer flavoprotein domain
YSA_RS13530	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS13530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS13545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS13545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS13595	SM00563	Phosphate acyltransferases
YSA_RS13605	SM00448	cheY-homologous receiver domain
YSA_RS13605	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS13610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS13610	SM00387	Histidine kinase-like ATPases
YSA_RS13610	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS13630	SM00052	Putative diguanylate phosphodiesterase
YSA_RS13630	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS13630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS13630	SM00091	PAS domain
YSA_RS13630	SM00267	diguanylate cyclase
YSA_RS13700	SM00965	Secretin and TonB N terminus short domain
YSA_RS13715	SM00479	YSA_RS13715
YSA_RS13720	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS13725	SM00448	cheY-homologous receiver domain
YSA_RS13760	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS13760	SM00876	Biotin and Thiamin Synthesis associated domain
YSA_RS13795	SM00267	diguanylate cyclase
YSA_RS13825	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS13860	SM00344	helix_turn_helix ASNC type
YSA_RS13875	SM00052	Putative diguanylate phosphodiesterase
YSA_RS13875	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS13875	SM00091	PAS domain
YSA_RS13875	SM00267	diguanylate cyclase
YSA_RS13885	SM00400	zinc finger
YSA_RS13885	SM00493	YSA_RS13885
YSA_RS13885	SM00766	DNA primase DnaG DnaB-binding
YSA_RS13900	SM01207	YSA_RS13900
YSA_RS13905	SM00905	Dihydroneopterin aldolase
YSA_RS13930	SM00763	PrkA AAA domain
YSA_RS13935	SM00450	Rhodanese Homology Domain
YSA_RS13950	SM00650	Ribosomal RNA adenine dimethylases
YSA_RS13980	SM00271	DnaJ molecular chaperone homology domain
YSA_RS13990	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS13990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS13990	SM00091	PAS domain
YSA_RS13990	SM00387	Histidine kinase-like ATPases
YSA_RS13995	SM00421	helix_turn_helix, Lux Regulon
YSA_RS13995	SM00448	cheY-homologous receiver domain
YSA_RS14000	SM00382	ATPases associated with a variety of cellular activities
YSA_RS14035	SM00869	Autotransporter beta-domain
YSA_RS14060	SM00100	Cyclic nucleotide-monophosphate binding domain
YSA_RS14060	SM00419	helix_turn_helix, cAMP Regulatory protein
YSA_RS14085	SM00822	YSA_RS14085
YSA_RS14100	SM00859	Semialdehyde dehydrogenase, NAD binding domain
YSA_RS14195	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
YSA_RS14195	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
YSA_RS14200	SM00649	Ribosomal protein L11/L12
YSA_RS14225	SM00663	RNA polymerase I subunit A N-terminus
YSA_RS14240	SM00838	Elongation factor G C-terminus
YSA_RS14240	SM00889	Elongation factor G, domain IV
YSA_RS14250	SM01403	YSA_RS14250
YSA_RS14270	SM01382	YSA_RS14270
YSA_RS14270	SM01383	YSA_RS14270
YSA_RS14285	SM00322	K homology RNA-binding domain
YSA_RS14305	SM01374	YSA_RS14305
YSA_RS14310	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
YSA_RS14375	SM00363	S4 RNA-binding domain
YSA_RS14375	SM01390	YSA_RS14375
YSA_RS14380	SM00662	RNA polymerases D
YSA_RS14390	SM01060	YSA_RS14390
YSA_RS14415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS14430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
YSA_RS14470	SM00870	YSA_RS14470
YSA_RS14530	SM00382	ATPases associated with a variety of cellular activities
YSA_RS14625	SM00861	Transketolase, pyrimidine binding domain
YSA_RS14655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS14655	SM00387	Histidine kinase-like ATPases
YSA_RS14655	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS14660	SM00448	cheY-homologous receiver domain
YSA_RS14660	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS14740	SM00382	ATPases associated with a variety of cellular activities
YSA_RS14765	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
YSA_RS14770	SM00829	Enoylreductase
YSA_RS14780	SM00861	Transketolase, pyrimidine binding domain
YSA_RS14795	SM00382	ATPases associated with a variety of cellular activities
YSA_RS14800	SM00878	Biotin carboxylase C-terminal domain
YSA_RS14820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS14825	SM00267	diguanylate cyclase
YSA_RS14825	SM00448	cheY-homologous receiver domain
YSA_RS14850	SM01321	YSA_RS14850
YSA_RS14860	SM01359	YSA_RS14860
YSA_RS14860	SM01360	YSA_RS14860
YSA_RS14880	SM00421	helix_turn_helix, Lux Regulon
YSA_RS14880	SM00448	cheY-homologous receiver domain
YSA_RS14915	SM00822	YSA_RS14915
YSA_RS14925	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS14930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS14930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS14935	SM00422	helix_turn_helix, mercury resistance
YSA_RS14960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS15040	SM00904	Riboflavin kinase
YSA_RS15105	SM00382	ATPases associated with a variety of cellular activities
YSA_RS15110	SM00382	ATPases associated with a variety of cellular activities
YSA_RS15130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS15130	SM00895	YSA_RS15130
YSA_RS15155	SM00382	ATPases associated with a variety of cellular activities
YSA_RS15155	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS15245	SM00357	Cold shock protein domain
YSA_RS15275	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS15300	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS15335	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS15365	SM00344	helix_turn_helix ASNC type
YSA_RS15395	SM00052	Putative diguanylate phosphodiesterase
YSA_RS15395	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS15395	SM00091	PAS domain
YSA_RS15395	SM00267	diguanylate cyclase
YSA_RS15405	SM00382	ATPases associated with a variety of cellular activities
YSA_RS15410	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
YSA_RS15490	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
YSA_RS15570	SM00478	endonuclease III
YSA_RS15575	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS15660	SM01400	YSA_RS15660
YSA_RS15680	SM00028	Tetratricopeptide repeats
YSA_RS15705	SM00937	YSA_RS15705
YSA_RS15740	SM00422	helix_turn_helix, mercury resistance
YSA_RS15880	SM00382	ATPases associated with a variety of cellular activities
YSA_RS15880	SM00421	helix_turn_helix, Lux Regulon
YSA_RS15885	SM00028	Tetratricopeptide repeats
YSA_RS15885	SM00448	cheY-homologous receiver domain
YSA_RS15890	SM00387	Histidine kinase-like ATPases
YSA_RS15900	SM00849	Metallo-beta-lactamase superfamily
YSA_RS15935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS15935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS15975	SM00644	YSA_RS15975
YSA_RS15990	SM00354	helix_turn _helix lactose operon repressor
YSA_RS16020	SM00267	diguanylate cyclase
YSA_RS16045	SM00260	Two component signalling adaptor domain
YSA_RS16045	SM00448	cheY-homologous receiver domain
YSA_RS16055	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16070	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS16070	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16145	SM00965	Secretin and TonB N terminus short domain
YSA_RS16160	SM00450	Rhodanese Homology Domain
YSA_RS16175	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16245	SM01323	YSA_RS16245
YSA_RS16305	SM00271	DnaJ molecular chaperone homology domain
YSA_RS16325	SM00562	YSA_RS16325
YSA_RS16335	SM00028	Tetratricopeptide repeats
YSA_RS16340	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS16360	SM00564	beta-propeller repeat
YSA_RS16390	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
YSA_RS16395	SM00671	Sel1-like repeats.
YSA_RS16415	SM00965	Secretin and TonB N terminus short domain
YSA_RS16420	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS16420	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16460	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS16480	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16485	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16525	SM00387	Histidine kinase-like ATPases
YSA_RS16525	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS16530	SM00448	cheY-homologous receiver domain
YSA_RS16545	SM00867	YceI-like domain 
YSA_RS16550	SM00155	Phospholipase D. Active site motifs.
YSA_RS16595	SM00448	cheY-homologous receiver domain
YSA_RS16595	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS16600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS16600	SM00387	Histidine kinase-like ATPases
YSA_RS16600	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS16660	SM00052	Putative diguanylate phosphodiesterase
YSA_RS16660	SM00267	diguanylate cyclase
YSA_RS16695	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS16705	SM00563	Phosphate acyltransferases
YSA_RS16740	SM00845	GatB domain
YSA_RS16775	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS16855	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16875	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS16880	SM00382	ATPases associated with a variety of cellular activities
YSA_RS16935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS16935	SM00895	YSA_RS16935
YSA_RS16960	SM00411	bacterial (prokaryotic) histone like domain
YSA_RS17010	SM00357	Cold shock protein domain
YSA_RS17070	SM00091	PAS domain
YSA_RS17070	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17115	SM00965	Secretin and TonB N terminus short domain
YSA_RS17130	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
YSA_RS17145	SM00448	cheY-homologous receiver domain
YSA_RS17145	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS17150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS17150	SM00387	Histidine kinase-like ATPases
YSA_RS17150	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS17175	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17220	SM00917	LeuA allosteric (dimerisation) domain
YSA_RS17250	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS17250	SM01240	YSA_RS17250
YSA_RS17280	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS17285	SM01211	YSA_RS17285
YSA_RS17405	SM00487	DEAD-like helicases superfamily
YSA_RS17405	SM00490	helicase superfamily c-terminal domain
YSA_RS17430	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17430	SM00448	cheY-homologous receiver domain
YSA_RS17435	SM00387	Histidine kinase-like ATPases
YSA_RS17435	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS17440	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17455	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS17460	SM00369	Leucine-rich repeats, typical (most populated) subfamily
YSA_RS17470	SM00420	helix_turn_helix, Deoxyribose operon repressor
YSA_RS17470	SM01134	YSA_RS17470
YSA_RS17490	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17500	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
YSA_RS17525	SM00479	YSA_RS17525
YSA_RS17550	SM00421	helix_turn_helix, Lux Regulon
YSA_RS17550	SM00448	cheY-homologous receiver domain
YSA_RS17560	SM00478	endonuclease III
YSA_RS17560	SM00525	YSA_RS17560
YSA_RS17570	SM00900	YSA_RS17570
YSA_RS17595	SM00357	Cold shock protein domain
YSA_RS17615	SM00487	DEAD-like helicases superfamily
YSA_RS17615	SM00490	helicase superfamily c-terminal domain
YSA_RS17640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS17670	SM00769	Water Stress and Hypersensitive response
YSA_RS17705	SM00491	YSA_RS17705
YSA_RS17755	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17760	SM00382	ATPases associated with a variety of cellular activities
YSA_RS17790	SM00052	Putative diguanylate phosphodiesterase
YSA_RS17790	SM00267	diguanylate cyclase
YSA_RS17795	SM00487	DEAD-like helicases superfamily
YSA_RS17795	SM00490	helicase superfamily c-terminal domain
YSA_RS17835	SM00052	Putative diguanylate phosphodiesterase
YSA_RS17835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS17835	SM00091	PAS domain
YSA_RS17835	SM00267	diguanylate cyclase
YSA_RS17840	SM00267	diguanylate cyclase
YSA_RS17890	SM00870	YSA_RS17890
YSA_RS17975	SM00448	cheY-homologous receiver domain
YSA_RS17975	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS17980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS17980	SM00387	Histidine kinase-like ATPases
YSA_RS17980	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS18000	SM00448	cheY-homologous receiver domain
YSA_RS18000	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS18005	SM00387	Histidine kinase-like ATPases
YSA_RS18005	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS18025	SM00363	S4 RNA-binding domain
YSA_RS18055	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS18120	SM00357	Cold shock protein domain
YSA_RS18135	SM00834	Putative regulatory protein
YSA_RS18155	SM00278	Helix-hairpin-helix DNA-binding motif class 1
YSA_RS18160	SM00382	ATPases associated with a variety of cellular activities
YSA_RS18220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS18220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS18265	SM01130	YSA_RS18265
YSA_RS18275	SM00849	Metallo-beta-lactamase superfamily
YSA_RS18350	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS18370	SM00943	Bifunctional DNA primase/polymerase, N-terminal
YSA_RS18575	SM00287	Bacterial SH3 domain homologues
YSA_RS18605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS18625	SM01130	YSA_RS18625
YSA_RS18640	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS18650	SM00852	Probable molybdopterin binding domain
YSA_RS18660	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS18670	SM00344	helix_turn_helix ASNC type
YSA_RS18690	SM00341	Helicase and RNase D C-terminal
YSA_RS18690	SM00474	3'-5' exonuclease
YSA_RS18725	SM00507	HNH nucleases
YSA_RS18770	SM00796	Allophanate hydrolase subunit 1
YSA_RS18775	SM00797	Allophanate hydrolase subunit 2
YSA_RS18785	SM00382	ATPases associated with a variety of cellular activities
YSA_RS18830	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS18910	SM01230	YSA_RS18910
YSA_RS18915	SM00382	ATPases associated with a variety of cellular activities
YSA_RS18915	SM00487	DEAD-like helicases superfamily
YSA_RS18915	SM00490	helicase superfamily c-terminal domain
YSA_RS18915	SM00847	Helicase associated domain (HA2)  Add an annotation
YSA_RS18935	SM00382	ATPases associated with a variety of cellular activities
YSA_RS18995	SM00487	DEAD-like helicases superfamily
YSA_RS18995	SM00490	helicase superfamily c-terminal domain
YSA_RS19050	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS19055	SM01144	YSA_RS19055
YSA_RS19075	SM00341	Helicase and RNase D C-terminal
YSA_RS19075	SM00487	DEAD-like helicases superfamily
YSA_RS19075	SM00490	helicase superfamily c-terminal domain
YSA_RS19075	SM00956	YSA_RS19075
YSA_RS19080	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS19100	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS19115	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS19130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS19130	SM00387	Histidine kinase-like ATPases
YSA_RS19130	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS19140	SM00448	cheY-homologous receiver domain
YSA_RS19140	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS19155	SM00481	DNA polymerase alpha chain like domain
YSA_RS19175	SM00363	S4 RNA-binding domain
YSA_RS19215	SM00091	PAS domain
YSA_RS19215	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19230	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS19245	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19250	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS19290	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
YSA_RS19330	SM00116	Domain in cystathionine beta-synthase and other proteins.
YSA_RS19330	SM00924	MgtE intracellular N domain
YSA_RS19340	SM00072	Guanylate kinase homologues.
YSA_RS19360	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS19360	SM00091	PAS domain
YSA_RS19360	SM00267	diguanylate cyclase
YSA_RS19375	SM00861	Transketolase, pyrimidine binding domain
YSA_RS19385	SM00344	helix_turn_helix ASNC type
YSA_RS19390	SM01230	YSA_RS19390
YSA_RS19415	SM00858	YSA_RS19415
YSA_RS19420	SM00260	Two component signalling adaptor domain
YSA_RS19420	SM00448	cheY-homologous receiver domain
YSA_RS19425	SM00138	Methyltransferase, chemotaxis proteins 
YSA_RS19470	SM00047	Lysozyme subfamily 2
YSA_RS19570	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19575	SM00091	PAS domain
YSA_RS19575	SM00387	Histidine kinase-like ATPases
YSA_RS19575	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS19580	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19580	SM00448	cheY-homologous receiver domain
YSA_RS19605	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19620	SM00331	Sigma factor PP2C-like phosphatases
YSA_RS19620	SM00448	cheY-homologous receiver domain
YSA_RS19625	SM00073	Histidine Phosphotransfer domain
YSA_RS19700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS19700	SM00895	YSA_RS19700
YSA_RS19710	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19710	SM00962	SRP54-type protein, GTPase domain
YSA_RS19725	SM00448	cheY-homologous receiver domain
YSA_RS19735	SM00073	Histidine Phosphotransfer domain
YSA_RS19735	SM00260	Two component signalling adaptor domain
YSA_RS19735	SM00387	Histidine kinase-like ATPases
YSA_RS19735	SM01231	YSA_RS19735
YSA_RS19740	SM00448	cheY-homologous receiver domain
YSA_RS19760	SM00260	Two component signalling adaptor domain
YSA_RS19765	SM00260	Two component signalling adaptor domain
YSA_RS19790	SM00382	ATPases associated with a variety of cellular activities
YSA_RS19830	SM00028	Tetratricopeptide repeats
YSA_RS19880	SM00344	helix_turn_helix ASNC type
YSA_RS20010	SM00095	Transthyretin
YSA_RS20020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS20020	SM00895	YSA_RS20020
YSA_RS20040	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YSA_RS20045	SM01092	CO dehydrogenase flavoprotein C-terminal domain
YSA_RS20050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS20055	SM00968	SMC proteins Flexible Hinge Domain
YSA_RS20060	SM00771	ZipA, C-terminal domain (FtsZ-binding)
YSA_RS20065	SM00278	Helix-hairpin-helix DNA-binding motif class 1
YSA_RS20065	SM00292	breast cancer carboxy-terminal domain
YSA_RS20065	SM00532	Ligase N family
YSA_RS20070	SM00422	helix_turn_helix, mercury resistance
YSA_RS20085	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS20090	SM00382	ATPases associated with a variety of cellular activities
YSA_RS20100	SM00493	YSA_RS20100
YSA_RS20110	SM00100	Cyclic nucleotide-monophosphate binding domain
YSA_RS20110	SM00419	helix_turn_helix, cAMP Regulatory protein
YSA_RS20115	SM00729	Elongator protein 3, MiaB family, Radical SAM
YSA_RS20195	SM00479	YSA_RS20195
YSA_RS20200	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS20210	SM00823	Phosphopantetheine attachment site
YSA_RS20305	SM00448	cheY-homologous receiver domain
YSA_RS20305	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS20310	SM00387	Histidine kinase-like ATPases
YSA_RS20310	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS20320	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
YSA_RS20360	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS20370	SM00893	Electron transfer flavoprotein domain
YSA_RS20375	SM00893	Electron transfer flavoprotein domain
YSA_RS20395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS20440	SM00861	Transketolase, pyrimidine binding domain
YSA_RS20460	SM00881	CoA binding domain
YSA_RS20495	SM00823	Phosphopantetheine attachment site
YSA_RS20500	SM00823	Phosphopantetheine attachment site
YSA_RS20505	SM00965	Secretin and TonB N terminus short domain
YSA_RS20515	SM00823	Phosphopantetheine attachment site
YSA_RS20520	SM00382	ATPases associated with a variety of cellular activities
YSA_RS20525	SM01006	Siderophore biosynthesis protein domain
YSA_RS20535	SM00382	ATPases associated with a variety of cellular activities
YSA_RS20560	SM00387	Histidine kinase-like ATPases
YSA_RS20580	SM00825	Beta-ketoacyl synthase
YSA_RS20590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS20590	SM00387	Histidine kinase-like ATPases
YSA_RS20590	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS20590	SM00448	cheY-homologous receiver domain
YSA_RS20615	SM00855	Phosphoglycerate mutase family
YSA_RS20665	SM00387	Histidine kinase-like ATPases
YSA_RS20665	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS20670	SM00448	cheY-homologous receiver domain
YSA_RS20670	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS20690	SM00382	ATPases associated with a variety of cellular activities
YSA_RS20715	SM00257	Lysin motif
YSA_RS20720	SM00849	Metallo-beta-lactamase superfamily
YSA_RS20735	SM00479	YSA_RS20735
YSA_RS20760	SM00421	helix_turn_helix, Lux Regulon
YSA_RS20820	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
YSA_RS20820	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
YSA_RS20825	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
YSA_RS20880	SM00838	Elongation factor G C-terminus
YSA_RS20880	SM00889	Elongation factor G, domain IV
YSA_RS20935	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS20940	SM00421	helix_turn_helix, Lux Regulon
YSA_RS20940	SM00448	cheY-homologous receiver domain
YSA_RS20945	SM00278	Helix-hairpin-helix DNA-binding motif class 1
YSA_RS20945	SM00465	GIY-YIG type nucleases (URI domain)
YSA_RS20980	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS20985	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS20990	SM00878	Biotin carboxylase C-terminal domain
YSA_RS21015	SM00642	Alpha-amylase domain
YSA_RS21020	SM00642	Alpha-amylase domain
YSA_RS21025	SM00642	Alpha-amylase domain
YSA_RS21030	SM00869	Autotransporter beta-domain
YSA_RS21040	SM00642	Alpha-amylase domain
YSA_RS21050	SM00642	Alpha-amylase domain
YSA_RS21060	SM00642	Alpha-amylase domain
YSA_RS21070	SM01350	YSA_RS21070
YSA_RS21165	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
YSA_RS21165	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
YSA_RS21165	SM00493	YSA_RS21165
YSA_RS21175	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
YSA_RS21205	SM01329	YSA_RS21205
YSA_RS21210	SM00357	Cold shock protein domain
YSA_RS21220	SM00382	ATPases associated with a variety of cellular activities
YSA_RS21220	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS21225	SM00316	Ribosomal protein S1-like RNA-binding domain
YSA_RS21240	SM00843	YSA_RS21240
YSA_RS21250	SM00382	ATPases associated with a variety of cellular activities
YSA_RS21345	SM01192	YSA_RS21345
YSA_RS21345	SM01193	YSA_RS21345
YSA_RS21355	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS21360	SM00822	YSA_RS21360
YSA_RS21380	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS21395	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS21410	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS21420	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS21505	SM00882	Coenzyme A transferase
YSA_RS21510	SM00882	Coenzyme A transferase
YSA_RS21515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS21515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS21535	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YSA_RS21560	SM00382	ATPases associated with a variety of cellular activities
YSA_RS21565	SM00382	ATPases associated with a variety of cellular activities
YSA_RS21570	SM00060	Fibronectin type 3 domain
YSA_RS21575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS21575	SM00895	YSA_RS21575
YSA_RS21580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS21580	SM00895	YSA_RS21580
YSA_RS21595	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YSA_RS21605	SM00347	helix_turn_helix multiple antibiotic resistance protein
YSA_RS21660	SM00267	diguanylate cyclase
YSA_RS21710	SM00855	Phosphoglycerate mutase family
YSA_RS21815	SM00421	helix_turn_helix, Lux Regulon
YSA_RS21850	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS21875	SM00382	ATPases associated with a variety of cellular activities
YSA_RS21895	SM00990	YSA_RS21895
YSA_RS21940	SM00507	HNH nucleases
YSA_RS22020	SM00232	JAB/MPN domain
YSA_RS22200	SM00422	helix_turn_helix, mercury resistance
YSA_RS22215	SM00829	Enoylreductase
YSA_RS22235	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS22235	SM00091	PAS domain
YSA_RS22235	SM00387	Histidine kinase-like ATPases
YSA_RS22235	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS22240	SM00382	ATPases associated with a variety of cellular activities
YSA_RS22245	SM00448	cheY-homologous receiver domain
YSA_RS22260	SM00382	ATPases associated with a variety of cellular activities
YSA_RS22315	SM00382	ATPases associated with a variety of cellular activities
YSA_RS22360	SM00923	MbtH-like protein
YSA_RS22390	SM00382	ATPases associated with a variety of cellular activities
YSA_RS22530	SM00448	cheY-homologous receiver domain
YSA_RS22535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS22535	SM00387	Histidine kinase-like ATPases
YSA_RS22535	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS22535	SM00448	cheY-homologous receiver domain
YSA_RS22540	SM00138	Methyltransferase, chemotaxis proteins 
YSA_RS22550	SM00387	Histidine kinase-like ATPases
YSA_RS22550	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS22550	SM00448	cheY-homologous receiver domain
YSA_RS22555	SM00448	cheY-homologous receiver domain
YSA_RS22575	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS22590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS22620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS22620	SM00895	YSA_RS22620
YSA_RS22650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS22650	SM00895	YSA_RS22650
YSA_RS22665	SM00382	ATPases associated with a variety of cellular activities
YSA_RS22690	SM00448	cheY-homologous receiver domain
YSA_RS22690	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS22695	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS22700	SM00387	Histidine kinase-like ATPases
YSA_RS22700	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS22700	SM00448	cheY-homologous receiver domain
YSA_RS22720	SM00881	CoA binding domain
YSA_RS22730	SM01005	Alanine racemase, C-terminal domain
YSA_RS22760	SM00421	helix_turn_helix, Lux Regulon
YSA_RS22770	SM00421	helix_turn_helix, Lux Regulon
YSA_RS22780	SM00822	YSA_RS22780
YSA_RS22790	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YSA_RS22810	SM00052	Putative diguanylate phosphodiesterase
YSA_RS22810	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS22810	SM00091	PAS domain
YSA_RS22810	SM00267	diguanylate cyclase
YSA_RS22845	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS22850	SM00155	Phospholipase D. Active site motifs.
YSA_RS22855	SM00267	diguanylate cyclase
YSA_RS22880	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS22905	SM00344	helix_turn_helix ASNC type
YSA_RS22920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS22920	SM00387	Histidine kinase-like ATPases
YSA_RS22920	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS22920	SM00448	cheY-homologous receiver domain
YSA_RS22930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS22930	SM00895	YSA_RS22930
YSA_RS22940	SM00903	Flavin reductase like domain
YSA_RS22965	SM00903	Flavin reductase like domain
YSA_RS22975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS22975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS22990	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS23005	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23025	SM00859	Semialdehyde dehydrogenase, NAD binding domain
YSA_RS23035	SM00287	Bacterial SH3 domain homologues
YSA_RS23070	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS23080	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YSA_RS23155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS23155	SM00895	YSA_RS23155
YSA_RS23165	SM00858	YSA_RS23165
YSA_RS23175	SM01130	YSA_RS23175
YSA_RS23200	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS23215	SM00387	Histidine kinase-like ATPases
YSA_RS23220	SM00421	helix_turn_helix, Lux Regulon
YSA_RS23220	SM00448	cheY-homologous receiver domain
YSA_RS23230	SM00564	beta-propeller repeat
YSA_RS23240	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS23250	SM00849	Metallo-beta-lactamase superfamily
YSA_RS23255	SM00564	beta-propeller repeat
YSA_RS23275	SM00387	Histidine kinase-like ATPases
YSA_RS23275	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS23275	SM00448	cheY-homologous receiver domain
YSA_RS23310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS23335	SM00460	Transglutaminase/protease-like homologues
YSA_RS23390	SM00903	Flavin reductase like domain
YSA_RS23455	SM01236	YSA_RS23455
YSA_RS23460	SM00822	YSA_RS23460
YSA_RS23470	SM00448	cheY-homologous receiver domain
YSA_RS23470	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS23475	SM00387	Histidine kinase-like ATPases
YSA_RS23475	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS23485	SM00226	Low molecular weight phosphatase family
YSA_RS23495	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS23585	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS23585	SM00091	PAS domain
YSA_RS23590	SM00422	helix_turn_helix, mercury resistance
YSA_RS23610	SM01400	YSA_RS23610
YSA_RS23630	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23655	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23685	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23720	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23740	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23750	SM00382	ATPases associated with a variety of cellular activities
YSA_RS23760	SM00825	Beta-ketoacyl synthase
YSA_RS23770	SM00825	Beta-ketoacyl synthase
YSA_RS23785	SM00822	YSA_RS23785
YSA_RS23790	SM00822	YSA_RS23790
YSA_RS23810	SM00422	helix_turn_helix, mercury resistance
YSA_RS23830	SM00829	Enoylreductase
YSA_RS23840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS23850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YSA_RS23865	SM00858	YSA_RS23865
YSA_RS23885	SM00990	YSA_RS23885
YSA_RS23890	SM00488	YSA_RS23890
YSA_RS23890	SM00491	YSA_RS23890
YSA_RS23925	SM00988	UreE urease accessory protein, N-terminal domain
YSA_RS23945	SM00148	Phospholipase C, catalytic domain (part); domain X
YSA_RS24000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS24000	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS24000	SM01049	YSA_RS24000
YSA_RS24035	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS24050	SM01007	Class II Aldolase and Adducin N-terminal domain
YSA_RS24115	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS24130	SM01060	YSA_RS24130
YSA_RS24215	SM00840	YSA_RS24215
YSA_RS24220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS24220	SM00387	Histidine kinase-like ATPases
YSA_RS24220	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS24225	SM00448	cheY-homologous receiver domain
YSA_RS24225	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS24230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS24230	SM00895	YSA_RS24230
YSA_RS24250	SM00090	RIO-like kinase
YSA_RS24255	SM01004	Delta-aminolevulinic acid dehydratase
YSA_RS24290	SM00796	Allophanate hydrolase subunit 1
YSA_RS24295	SM00797	Allophanate hydrolase subunit 2
YSA_RS24315	SM00984	UDP binding domain
YSA_RS24370	SM00382	ATPases associated with a variety of cellular activities
YSA_RS24420	SM00448	cheY-homologous receiver domain
YSA_RS24430	SM00387	Histidine kinase-like ATPases
YSA_RS24435	SM00387	Histidine kinase-like ATPases
YSA_RS24470	SM00448	cheY-homologous receiver domain
YSA_RS24470	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS24475	SM00387	Histidine kinase-like ATPases
YSA_RS24475	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS24480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
YSA_RS24490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS24495	SM00833	Cobalamin synthesis protein cobW C-terminal domain
YSA_RS24530	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS24550	SM00829	Enoylreductase
YSA_RS24590	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS24600	SM00829	Enoylreductase
YSA_RS24620	SM00422	helix_turn_helix, mercury resistance
YSA_RS24735	SM00829	Enoylreductase
YSA_RS24765	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS24835	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS24860	SM00857	Resolvase, N terminal domain
YSA_RS24905	SM01040	BRO family, N-terminal domain
YSA_RS25090	SM00869	Autotransporter beta-domain
YSA_RS25110	SM00822	YSA_RS25110
YSA_RS25120	SM00382	ATPases associated with a variety of cellular activities
YSA_RS25230	SM00382	ATPases associated with a variety of cellular activities
YSA_RS25230	SM01086	C-terminal, D2-small domain, of ClpB protein
YSA_RS25360	SM00346	helix_turn_helix isocitrate lyase regulation
YSA_RS25365	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS25370	SM00822	YSA_RS25370
YSA_RS25410	SM00481	DNA polymerase alpha chain like domain
YSA_RS25425	SM00882	Coenzyme A transferase
YSA_RS25430	SM00882	Coenzyme A transferase
YSA_RS25440	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS25560	SM01230	YSA_RS25560
YSA_RS25565	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS25615	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS25720	SM00052	Putative diguanylate phosphodiesterase
YSA_RS25720	SM00267	diguanylate cyclase
YSA_RS25795	SM00267	diguanylate cyclase
YSA_RS25845	SM01236	YSA_RS25845
YSA_RS25865	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
YSA_RS25915	SM00155	Phospholipase D. Active site motifs.
YSA_RS26040	SM00100	Cyclic nucleotide-monophosphate binding domain
YSA_RS26040	SM00419	helix_turn_helix, cAMP Regulatory protein
YSA_RS26065	SM00849	Metallo-beta-lactamase superfamily
YSA_RS26065	SM01027	Beta-Casp domain
YSA_RS26090	SM00100	Cyclic nucleotide-monophosphate binding domain
YSA_RS26090	SM00419	helix_turn_helix, cAMP Regulatory protein
YSA_RS26115	SM00382	ATPases associated with a variety of cellular activities
YSA_RS26120	SM00749	bacterial OsmY and nodulation domain
YSA_RS26200	SM00530	Helix-turn-helix XRE-family like proteins 
YSA_RS26310	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
YSA_RS26325	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
YSA_RS26395	SM00882	Coenzyme A transferase
YSA_RS26400	SM00882	Coenzyme A transferase
YSA_RS26410	SM00849	Metallo-beta-lactamase superfamily
YSA_RS26510	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS26550	SM01092	CO dehydrogenase flavoprotein C-terminal domain
YSA_RS26555	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YSA_RS26575	SM00829	Enoylreductase
YSA_RS26610	SM00825	Beta-ketoacyl synthase
YSA_RS26675	SM00267	diguanylate cyclase
YSA_RS26690	SM00344	helix_turn_helix ASNC type
YSA_RS26700	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
YSA_RS26700	SM00448	cheY-homologous receiver domain
YSA_RS26700	SM00911	HWE histidine kinase
YSA_RS26735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS26735	SM00387	Histidine kinase-like ATPases
YSA_RS26735	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS26740	SM00448	cheY-homologous receiver domain
YSA_RS26740	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS26780	SM00354	helix_turn _helix lactose operon repressor
YSA_RS26950	SM00421	helix_turn_helix, Lux Regulon
YSA_RS26950	SM00448	cheY-homologous receiver domain
YSA_RS26955	SM00062	Bacterial periplasmic substrate-binding proteins
YSA_RS26955	SM00387	Histidine kinase-like ATPases
YSA_RS26955	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS26955	SM00448	cheY-homologous receiver domain
YSA_RS26960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
YSA_RS26960	SM00091	PAS domain
YSA_RS26960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
YSA_RS26965	SM00354	helix_turn _helix lactose operon repressor
YSA_RS26985	SM00382	ATPases associated with a variety of cellular activities
YSA_RS26985	SM00448	cheY-homologous receiver domain
YSA_RS26990	SM00387	Histidine kinase-like ATPases
YSA_RS26990	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS26995	SM00387	Histidine kinase-like ATPases
YSA_RS26995	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS27030	SM00028	Tetratricopeptide repeats
YSA_RS27035	SM00387	Histidine kinase-like ATPases
YSA_RS27035	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS27035	SM00448	cheY-homologous receiver domain
YSA_RS27040	SM00091	PAS domain
YSA_RS27040	SM00387	Histidine kinase-like ATPases
YSA_RS27040	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS27040	SM00448	cheY-homologous receiver domain
YSA_RS27060	SM00052	Putative diguanylate phosphodiesterase
YSA_RS27070	SM01091	Transporter associated domain
YSA_RS27080	SM00342	helix_turn_helix, arabinose operon control protein
YSA_RS27120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
YSA_RS27120	SM00387	Histidine kinase-like ATPases
YSA_RS27120	SM00388	His Kinase A (phosphoacceptor) domain
YSA_RS27125	SM00448	cheY-homologous receiver domain
YSA_RS27125	SM00862	Transcriptional regulatory protein, C terminal
YSA_RS27190	SM00382	ATPases associated with a variety of cellular activities
YSA_RS27195	SM00091	PAS domain
YSA_RS27195	SM00382	ATPases associated with a variety of cellular activities
YSA_RS27235	SM00965	Secretin and TonB N terminus short domain
YSA_RS27265	SM00448	cheY-homologous receiver domain
YSA_RS27335	SM00382	ATPases associated with a variety of cellular activities
YSA_RS27585	SM00388	His Kinase A (phosphoacceptor) domain
