locus-tag class description YSA_RS00025 PF02195 ParB-like nuclease domain YSA_RS00025 PF17762 HTH domain found in ParB protein YSA_RS00030 PF13614 AAA domain YSA_RS00075 PF00171 Aldehyde dehydrogenase family YSA_RS00080 PF00107 Zinc-binding dehydrogenase YSA_RS00080 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS00085 PF00775 Dioxygenase YSA_RS00085 PF04444 Catechol dioxygenase N terminus YSA_RS00095 PF07690 Major Facilitator Superfamily YSA_RS00100 PF03781 Sulfatase-modifying factor enzyme 1 YSA_RS00105 PF00884 Sulfatase YSA_RS00115 PF13411 MerR HTH family regulatory protein YSA_RS00125 PF01252 Signal peptidase (SPase) II YSA_RS00180 PF02195 ParB-like nuclease domain YSA_RS00185 PF13742 OB-fold nucleic acid binding domain YSA_RS00185 PF02601 Exonuclease VII, large subunit YSA_RS00250 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system YSA_RS00290 PF00589 Phage integrase family YSA_RS00310 PF00970 Oxidoreductase FAD-binding domain YSA_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS00310 PF00175 Oxidoreductase NAD-binding domain YSA_RS00315 PF00355 Rieske [2Fe-2S] domain YSA_RS00320 PF00355 Rieske [2Fe-2S] domain YSA_RS00320 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YSA_RS00325 PF00866 Ring hydroxylating beta subunit YSA_RS00335 PF00171 Aldehyde dehydrogenase family YSA_RS00340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS00345 PF03922 OmpW family YSA_RS00350 PF00701 Dihydrodipicolinate synthetase family YSA_RS00355 PF01323 DSBA-like thioredoxin domain YSA_RS00370 PF01638 HxlR-like helix-turn-helix YSA_RS00375 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS00375 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS00380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS00385 PF00248 Aldo/keto reductase family YSA_RS00420 PF00582 Universal stress protein family YSA_RS00430 PF03466 LysR substrate binding domain YSA_RS00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00450 PF00665 Integrase core domain YSA_RS00450 PF13276 HTH-like domain YSA_RS00455 PF01527 Transposase YSA_RS00470 PF12729 Four helix bundle sensory module for signal transduction YSA_RS00470 PF00672 HAMP domain YSA_RS00470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS00475 PF01361 Tautomerase enzyme YSA_RS00485 PF00682 HMGL-like YSA_RS00485 PF07836 DmpG-like communication domain YSA_RS00490 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation YSA_RS00490 PF01118 Semialdehyde dehydrogenase, NAD binding domain YSA_RS00500 PF00561 alpha/beta hydrolase fold YSA_RS00505 PF00171 Aldehyde dehydrogenase family YSA_RS00510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS00515 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS00525 PF01494 FAD binding domain YSA_RS00555 PF02796 Helix-turn-helix domain of resolvase YSA_RS00555 PF00239 Resolvase, N terminal domain YSA_RS00565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00565 PF03466 LysR substrate binding domain YSA_RS00605 PF02514 CobN/Magnesium Chelatase YSA_RS00610 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS00610 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS00620 PF00005 ABC transporter YSA_RS00620 PF12848 ABC transporter YSA_RS00625 PF01063 Amino-transferase class IV YSA_RS00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00635 PF03466 LysR substrate binding domain YSA_RS00640 PF02538 Hydantoinase B/oxoprolinase YSA_RS00645 PF01968 Hydantoinase/oxoprolinase YSA_RS00645 PF05378 Hydantoinase/oxoprolinase N-terminal region YSA_RS00660 PF11737 Protein of unknown function (DUF3300) YSA_RS00675 PF00892 EamA-like transporter family YSA_RS00700 PF12833 Helix-turn-helix domain YSA_RS00700 PF01965 DJ-1/PfpI family YSA_RS00705 PF17938 Tetracyclin repressor-like, C-terminal domain YSA_RS00705 PF00440 Bacterial regulatory proteins, tetR family YSA_RS00715 PF09084 NMT1/THI5 like YSA_RS00720 PF00296 Luciferase-like monooxygenase YSA_RS00725 PF07883 Cupin domain YSA_RS00725 PF05899 Protein of unknown function (DUF861) YSA_RS00730 PF01852 START domain YSA_RS00735 PF01037 Lrp/AsnC ligand binding domain YSA_RS00740 PF02423 Ornithine cyclodeaminase/mu-crystallin family YSA_RS00745 PF03466 LysR substrate binding domain YSA_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00755 PF01494 FAD binding domain YSA_RS00760 PF02311 AraC-like ligand binding domain YSA_RS00760 PF12833 Helix-turn-helix domain YSA_RS00765 PF13411 MerR HTH family regulatory protein YSA_RS00770 PF00682 HMGL-like YSA_RS00775 PF02308 MgtC family YSA_RS00785 PF13746 4Fe-4S dicluster domain YSA_RS00785 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase YSA_RS00785 PF12801 4Fe-4S binding domain YSA_RS00790 PF00392 Bacterial regulatory proteins, gntR family YSA_RS00790 PF00155 Aminotransferase class I and II YSA_RS00795 PF08448 PAS fold YSA_RS00795 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS00795 PF13188 PAS domain YSA_RS00795 PF00072 Response regulator receiver domain YSA_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS00800 PF00072 Response regulator receiver domain YSA_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS00800 PF13426 PAS domain YSA_RS00825 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS00825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS00830 PF01047 MarR family YSA_RS00835 PF00072 Response regulator receiver domain YSA_RS00835 PF00196 Bacterial regulatory proteins, luxR family YSA_RS00840 PF00989 PAS fold YSA_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS00840 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS00845 PF13193 AMP-binding enzyme C-terminal domain YSA_RS00845 PF00501 AMP-binding enzyme YSA_RS00850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS00850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS00850 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS00850 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS00860 PF13726 Na+-H+ antiporter family YSA_RS00860 PF03553 Na+/H+ antiporter family YSA_RS00870 PF00672 HAMP domain YSA_RS00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS00885 PF03466 LysR substrate binding domain YSA_RS00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00905 PF01965 DJ-1/PfpI family YSA_RS00905 PF12833 Helix-turn-helix domain YSA_RS00910 PF01810 LysE type translocator YSA_RS00915 PF07690 Major Facilitator Superfamily YSA_RS00920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00920 PF03466 LysR substrate binding domain YSA_RS00930 PF01011 PQQ enzyme repeat YSA_RS00935 PF04966 Carbohydrate-selective porin, OprB family YSA_RS00940 PF01546 Peptidase family M20/M25/M40 YSA_RS00940 PF07687 Peptidase dimerisation domain YSA_RS00955 PF01042 Endoribonuclease L-PSP YSA_RS00965 PF04909 Amidohydrolase YSA_RS00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS00970 PF03466 LysR substrate binding domain YSA_RS00975 PF07715 TonB-dependent Receptor Plug Domain YSA_RS00975 PF00593 TonB dependent receptor YSA_RS00980 PF04773 FecR protein YSA_RS00980 PF16220 Domain of unknown function (DUF4880) YSA_RS00985 PF08281 Sigma-70, region 4 YSA_RS00985 PF04542 Sigma-70 region 2 YSA_RS00990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YSA_RS00990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YSA_RS00990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YSA_RS00990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YSA_RS01005 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS01005 PF00563 EAL domain YSA_RS01005 PF03707 Bacterial signalling protein N terminal repeat YSA_RS01010 PF02321 Outer membrane efflux protein YSA_RS01015 PF00873 AcrB/AcrD/AcrF family YSA_RS01020 PF00873 AcrB/AcrD/AcrF family YSA_RS01025 PF13533 Biotin-lipoyl like YSA_RS01030 PF08534 Redoxin YSA_RS01035 PF07690 Major Facilitator Superfamily YSA_RS01045 PF00155 Aminotransferase class I and II YSA_RS01050 PF02615 Malate/L-lactate dehydrogenase YSA_RS01060 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS01075 PF01266 FAD dependent oxidoreductase YSA_RS01080 PF00005 ABC transporter YSA_RS01090 PF00196 Bacterial regulatory proteins, luxR family YSA_RS01090 PF00072 Response regulator receiver domain YSA_RS01095 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS01095 PF00072 Response regulator receiver domain YSA_RS01095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS01095 PF09456 RcsC Alpha-Beta-Loop (ABL) YSA_RS01125 PF00005 ABC transporter YSA_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS01140 PF12849 PBP superfamily domain YSA_RS01170 PF07690 Major Facilitator Superfamily YSA_RS01175 PF00465 Iron-containing alcohol dehydrogenase YSA_RS01180 PF03466 LysR substrate binding domain YSA_RS01180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01185 PF01037 Lrp/AsnC ligand binding domain YSA_RS01215 PF07690 Major Facilitator Superfamily YSA_RS01225 PF00689 Cation transporting ATPase, C-terminus YSA_RS01225 PF00690 Cation transporter/ATPase, N-terminus YSA_RS01230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS01230 PF00672 HAMP domain YSA_RS01230 PF12729 Four helix bundle sensory module for signal transduction YSA_RS01235 PF00392 Bacterial regulatory proteins, gntR family YSA_RS01235 PF00155 Aminotransferase class I and II YSA_RS01240 PF00970 Oxidoreductase FAD-binding domain YSA_RS01240 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS01240 PF00175 Oxidoreductase NAD-binding domain YSA_RS01245 PF13673 Acetyltransferase (GNAT) domain YSA_RS01250 PF02293 AmiS/UreI family transporter YSA_RS01255 PF03861 ANTAR domain YSA_RS01265 PF07724 AAA domain (Cdc48 subfamily) YSA_RS01265 PF10431 C-terminal, D2-small domain, of ClpB protein YSA_RS01270 PF00795 Carbon-nitrogen hydrolase YSA_RS01275 PF00701 Dihydrodipicolinate synthetase family YSA_RS01280 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) YSA_RS01285 PF01270 Glycosyl hydrolases family 8 YSA_RS01290 PF03170 Bacterial cellulose synthase subunit YSA_RS01300 PF06564 Cellulose biosynthesis protein BcsQ YSA_RS01310 PF11658 Cellulose biosynthesis protein BcsG YSA_RS01320 PF10995 Cellulose biosynthesis GIL YSA_RS01325 PF00005 ABC transporter YSA_RS01325 PF00664 ABC transporter transmembrane region YSA_RS01330 PF06761 Intracellular multiplication and human macrophage-killing YSA_RS01330 PF14331 ImcF-related N-terminal domain YSA_RS01330 PF06744 Type VI secretion protein IcmF C-terminal YSA_RS01350 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YSA_RS01360 PF05947 Type VI secretion system, TssF YSA_RS01380 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YSA_RS01390 PF05638 Type VI secretion system effector, Hcp YSA_RS01395 PF13296 Putative type VI secretion system Rhs element Vgr YSA_RS01395 PF04717 Type VI secretion system, phage-baseplate injector YSA_RS01395 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YSA_RS01420 PF09339 IclR helix-turn-helix domain YSA_RS01420 PF01614 Bacterial transcriptional regulator YSA_RS01425 PF01488 Shikimate / quinate 5-dehydrogenase YSA_RS01425 PF08501 Shikimate dehydrogenase substrate binding domain YSA_RS01425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YSA_RS01430 PF00890 FAD binding domain YSA_RS01440 PF00890 FAD binding domain YSA_RS01455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YSA_RS01455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YSA_RS01465 PF00890 FAD binding domain YSA_RS01470 PF01966 HD domain YSA_RS01475 PF00171 Aldehyde dehydrogenase family YSA_RS01480 PF00202 Aminotransferase class-III YSA_RS01490 PF00324 Amino acid permease YSA_RS01495 PF00171 Aldehyde dehydrogenase family YSA_RS01500 PF01979 Amidohydrolase family YSA_RS01510 PF01126 Heme oxygenase YSA_RS01525 PF00884 Sulfatase YSA_RS01535 PF02470 MlaD protein YSA_RS01540 PF04403 Paraquat-inducible protein A YSA_RS01560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS01570 PF00083 Sugar (and other) transporter YSA_RS01570 PF07690 Major Facilitator Superfamily YSA_RS01575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS01580 PF00561 alpha/beta hydrolase fold YSA_RS01590 PF12462 DNA helicase IV / RNA helicase N terminal YSA_RS01590 PF00580 UvrD/REP helicase N-terminal domain YSA_RS01590 PF13361 UvrD-like helicase C-terminal domain YSA_RS01595 PF17954 Quercetinase C-terminal cupin domain YSA_RS01595 PF02678 Pirin YSA_RS01600 PF13193 AMP-binding enzyme C-terminal domain YSA_RS01600 PF00668 Condensation domain YSA_RS01600 PF00550 Phosphopantetheine attachment site YSA_RS01600 PF00975 Thioesterase domain YSA_RS01600 PF00501 AMP-binding enzyme YSA_RS01615 PF00664 ABC transporter transmembrane region YSA_RS01615 PF00005 ABC transporter YSA_RS01620 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS01625 PF02321 Outer membrane efflux protein YSA_RS01630 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS01630 PF03707 Bacterial signalling protein N terminal repeat YSA_RS01630 PF00563 EAL domain YSA_RS01645 PF01261 Xylose isomerase-like TIM barrel YSA_RS01645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS01650 PF00083 Sugar (and other) transporter YSA_RS01650 PF07690 Major Facilitator Superfamily YSA_RS01655 PF00282 Pyridoxal-dependent decarboxylase conserved domain YSA_RS01660 PF03466 LysR substrate binding domain YSA_RS01660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01665 PF01709 Transcriptional regulator YSA_RS01670 PF01266 FAD dependent oxidoreductase YSA_RS01675 PF07690 Major Facilitator Superfamily YSA_RS01680 PF03466 LysR substrate binding domain YSA_RS01680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01700 PF00324 Amino acid permease YSA_RS01705 PF00155 Aminotransferase class I and II YSA_RS01705 PF00392 Bacterial regulatory proteins, gntR family YSA_RS01715 PF07687 Peptidase dimerisation domain YSA_RS01715 PF01546 Peptidase family M20/M25/M40 YSA_RS01725 PF00106 short chain dehydrogenase YSA_RS01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01730 PF03466 LysR substrate binding domain YSA_RS01745 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS01745 PF13417 Glutathione S-transferase, N-terminal domain YSA_RS01750 PF07690 Major Facilitator Superfamily YSA_RS01755 PF03466 LysR substrate binding domain YSA_RS01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01760 PF17754 MftR C-terminal domain YSA_RS01760 PF00440 Bacterial regulatory proteins, tetR family YSA_RS01765 PF07969 Amidohydrolase family YSA_RS01775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS01775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS01790 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS01810 PF01966 HD domain YSA_RS01815 PF00593 TonB dependent receptor YSA_RS01815 PF07715 TonB-dependent Receptor Plug Domain YSA_RS01820 PF04960 Glutaminase YSA_RS01825 PF07690 Major Facilitator Superfamily YSA_RS01830 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit YSA_RS01830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YSA_RS01840 PF03466 LysR substrate binding domain YSA_RS01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01845 PF02585 GlcNAc-PI de-N-acetylase YSA_RS01850 PF03737 Aldolase/RraA YSA_RS01855 PF04303 PrpF protein YSA_RS01865 PF01227 GTP cyclohydrolase I YSA_RS01915 PF17151 Periplasmic sensor domain YSA_RS01915 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS01930 PF01361 Tautomerase enzyme YSA_RS01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS01940 PF03466 LysR substrate binding domain YSA_RS01965 PF00202 Aminotransferase class-III YSA_RS01970 PF00171 Aldehyde dehydrogenase family YSA_RS01980 PF01037 Lrp/AsnC ligand binding domain YSA_RS01985 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YSA_RS01990 PF00557 Metallopeptidase family M24 YSA_RS01990 PF01321 Creatinase/Prolidase N-terminal domain YSA_RS01995 PF02423 Ornithine cyclodeaminase/mu-crystallin family YSA_RS02000 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS02005 PF00155 Aminotransferase class I and II YSA_RS02005 PF00392 Bacterial regulatory proteins, gntR family YSA_RS02010 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS02020 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS02025 PF00005 ABC transporter YSA_RS02035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) YSA_RS02035 PF01348 Type II intron maturase YSA_RS02065 PF01740 STAS domain YSA_RS02065 PF00916 Sulfate permease family YSA_RS02070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YSA_RS02080 PF00719 Inorganic pyrophosphatase YSA_RS02095 PF01022 Bacterial regulatory protein, arsR family YSA_RS02100 PF01451 Low molecular weight phosphotyrosine protein phosphatase YSA_RS02105 PF01758 Sodium Bile acid symporter family YSA_RS02110 PF03358 NADPH-dependent FMN reductase YSA_RS02120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YSA_RS02120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YSA_RS02150 PF02322 Cytochrome bd terminal oxidase subunit II YSA_RS02155 PF01654 Cytochrome bd terminal oxidase subunit I YSA_RS02165 PF02954 Bacterial regulatory protein, Fis family YSA_RS02165 PF06490 Flagellar regulatory protein FleQ YSA_RS02165 PF00158 Sigma-54 interaction domain YSA_RS02170 PF00753 Metallo-beta-lactamase superfamily YSA_RS02180 PF01925 Sulfite exporter TauE/SafE YSA_RS02190 PF01022 Bacterial regulatory protein, arsR family YSA_RS02195 PF04143 Sulphur transport YSA_RS02245 PF07729 FCD domain YSA_RS02245 PF00392 Bacterial regulatory proteins, gntR family YSA_RS02250 PF00171 Aldehyde dehydrogenase family YSA_RS02260 PF00175 Oxidoreductase NAD-binding domain YSA_RS02260 PF00970 Oxidoreductase FAD-binding domain YSA_RS02260 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS02275 PF00665 Integrase core domain YSA_RS02275 PF13936 Helix-turn-helix domain YSA_RS02295 PF13614 AAA domain YSA_RS02340 PF01751 Toprim domain YSA_RS02340 PF01131 DNA topoisomerase YSA_RS02355 PF04002 RadC-like JAB domain YSA_RS02410 PF00293 NUDIX domain YSA_RS02495 PF18818 Metallopeptidase superfamily domain YSA_RS02495 PF08401 Domain of unknown function (DUF1738) YSA_RS02495 PF13362 Toprim domain YSA_RS02545 PF07509 Protein of unknown function (DUF1523) YSA_RS02550 PF02342 TerD domain YSA_RS02565 PF02342 TerD domain YSA_RS02570 PF02342 TerD domain YSA_RS02575 PF03741 Integral membrane protein TerC family YSA_RS02580 PF05099 Tellurite resistance protein TerB YSA_RS02585 PF02342 TerD domain YSA_RS02590 PF02342 TerD domain YSA_RS02605 PF15608 PELOTA RNA binding domain YSA_RS02605 PF11202 Phosphoribosyl transferase (PRTase) YSA_RS02620 PF02342 TerD domain YSA_RS02655 PF00216 Bacterial DNA-binding protein YSA_RS02660 PF01588 Putative tRNA binding domain YSA_RS02660 PF03484 tRNA synthetase B5 domain YSA_RS02660 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YSA_RS02660 PF03483 B3/4 domain YSA_RS02660 PF03147 Ferredoxin-fold anticodon binding domain YSA_RS02665 PF01409 tRNA synthetases class II core domain (F) YSA_RS02665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YSA_RS02670 PF00453 Ribosomal protein L20 YSA_RS02675 PF01632 Ribosomal protein L35 YSA_RS02680 PF05198 Translation initiation factor IF-3, N-terminal domain YSA_RS02680 PF00707 Translation initiation factor IF-3, C-terminal domain YSA_RS02685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YSA_RS02685 PF02824 TGS domain YSA_RS02685 PF03129 Anticodon binding domain YSA_RS02685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YSA_RS02695 PF00313 'Cold-shock' DNA-binding domain YSA_RS02715 PF01156 Inosine-uridine preferring nucleoside hydrolase YSA_RS02720 PF05025 RbsD / FucU transport protein family YSA_RS02725 PF00294 pfkB family carbohydrate kinase YSA_RS02730 PF00356 Bacterial regulatory proteins, lacI family YSA_RS02735 PF02653 Branched-chain amino acid transport system / permease component YSA_RS02740 PF00005 ABC transporter YSA_RS02745 PF13407 Periplasmic binding protein domain YSA_RS02750 PF17763 Glutaminase/Asparaginase C-terminal domain YSA_RS02750 PF00710 Asparaginase, N-terminal YSA_RS02755 PF00158 Sigma-54 interaction domain YSA_RS02755 PF01590 GAF domain YSA_RS02760 PF02560 Cyanate lyase C-terminal domain YSA_RS02765 PF01226 Formate/nitrite transporter YSA_RS02775 PF04231 Endonuclease I YSA_RS02780 PF02824 TGS domain YSA_RS02780 PF04607 Region found in RelA / SpoT proteins YSA_RS02780 PF13291 ACT domain YSA_RS02800 PF01266 FAD dependent oxidoreductase YSA_RS02815 PF03741 Integral membrane protein TerC family YSA_RS02815 PF03471 Transporter associated domain YSA_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS02825 PF03466 LysR substrate binding domain YSA_RS02830 PF00375 Sodium:dicarboxylate symporter family YSA_RS02835 PF04337 Protein of unknown function, DUF480 YSA_RS02855 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS02855 PF13192 Thioredoxin domain YSA_RS02860 PF00578 AhpC/TSA family YSA_RS02860 PF10417 C-terminal domain of 1-Cys peroxiredoxin YSA_RS02865 PF03741 Integral membrane protein TerC family YSA_RS02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS02870 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS02870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS02875 PF03466 LysR substrate binding domain YSA_RS02875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS02880 PF00266 Aminotransferase class-V YSA_RS02885 PF08808 RES domain YSA_RS02890 PF09722 Protein of unknown function (DUF2384) YSA_RS02895 PF00881 Nitroreductase family YSA_RS02900 PF03466 LysR substrate binding domain YSA_RS02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS02905 PF12833 Helix-turn-helix domain YSA_RS02905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YSA_RS02915 PF07690 Major Facilitator Superfamily YSA_RS02925 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS02925 PF00107 Zinc-binding dehydrogenase YSA_RS02930 PF06719 AraC-type transcriptional regulator N-terminus YSA_RS02930 PF12833 Helix-turn-helix domain YSA_RS02945 PF02627 Carboxymuconolactone decarboxylase family YSA_RS02955 PF07715 TonB-dependent Receptor Plug Domain YSA_RS02955 PF00593 TonB dependent receptor YSA_RS02970 PF01032 FecCD transport family YSA_RS02975 PF00005 ABC transporter YSA_RS02990 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS02990 PF00072 Response regulator receiver domain YSA_RS02995 PF13614 AAA domain YSA_RS03000 PF00083 Sugar (and other) transporter YSA_RS03000 PF08946 Osmosensory transporter coiled coil YSA_RS03005 PF00873 AcrB/AcrD/AcrF family YSA_RS03010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS03010 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS03015 PF02321 Outer membrane efflux protein YSA_RS03020 PF01220 Dehydroquinase class II YSA_RS03025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YSA_RS03025 PF08501 Shikimate dehydrogenase substrate binding domain YSA_RS03035 PF17991 Thioredoxin like C-terminal domain YSA_RS03035 PF02683 Cytochrome C biogenesis protein transmembrane region YSA_RS03035 PF00578 AhpC/TSA family YSA_RS03045 PF00486 Transcriptional regulatory protein, C terminal YSA_RS03045 PF00072 Response regulator receiver domain YSA_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS03050 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS03050 PF00672 HAMP domain YSA_RS03060 PF07681 DoxX YSA_RS03070 PF05114 Protein of unknown function (DUF692) YSA_RS03095 PF00136 DNA polymerase family B YSA_RS03095 PF03104 DNA polymerase family B, exonuclease domain YSA_RS03100 PF07690 Major Facilitator Superfamily YSA_RS03105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03105 PF03466 LysR substrate binding domain YSA_RS03110 PF03466 LysR substrate binding domain YSA_RS03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03145 PF12833 Helix-turn-helix domain YSA_RS03160 PF02630 SCO1/SenC YSA_RS03165 PF01521 Iron-sulphur cluster biosynthesis YSA_RS03165 PF01106 NifU-like domain YSA_RS03170 PF01757 Acyltransferase family YSA_RS03180 PF02310 B12 binding domain YSA_RS03180 PF02607 B12 binding domain YSA_RS03180 PF00809 Pterin binding enzyme YSA_RS03180 PF02965 Vitamin B12 dependent methionine synthase, activation domain YSA_RS03180 PF02574 Homocysteine S-methyltransferase YSA_RS03195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YSA_RS03195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YSA_RS03210 PF00248 Aldo/keto reductase family YSA_RS03215 PF07690 Major Facilitator Superfamily YSA_RS03220 PF07690 Major Facilitator Superfamily YSA_RS03225 PF12833 Helix-turn-helix domain YSA_RS03225 PF02311 AraC-like ligand binding domain YSA_RS03230 PF18027 Cytosolic carboxypeptidase N-terminal domain YSA_RS03230 PF00246 Zinc carboxypeptidase YSA_RS03270 PF00360 Phytochrome region YSA_RS03270 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS03270 PF01590 GAF domain YSA_RS03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS03270 PF08446 PAS fold YSA_RS03275 PF00072 Response regulator receiver domain YSA_RS03275 PF00486 Transcriptional regulatory protein, C terminal YSA_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS03280 PF00072 Response regulator receiver domain YSA_RS03280 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS03280 PF08448 PAS fold YSA_RS03280 PF13188 PAS domain YSA_RS03295 PF03969 AFG1-like ATPase YSA_RS03300 PF16177 Acetyl-coenzyme A synthetase N-terminus YSA_RS03300 PF00501 AMP-binding enzyme YSA_RS03300 PF13193 AMP-binding enzyme C-terminal domain YSA_RS03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03305 PF03466 LysR substrate binding domain YSA_RS03310 PF01743 Poly A polymerase head domain YSA_RS03310 PF00571 CBS domain YSA_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS03320 PF00072 Response regulator receiver domain YSA_RS03320 PF00486 Transcriptional regulatory protein, C terminal YSA_RS03340 PF01242 6-pyruvoyl tetrahydropterin synthase YSA_RS03355 PF00330 Aconitase family (aconitate hydratase) YSA_RS03355 PF06434 Aconitate hydratase 2 N-terminus YSA_RS03355 PF11791 Aconitate B N-terminal domain YSA_RS03360 PF03972 MmgE/PrpD family YSA_RS03365 PF04303 PrpF protein YSA_RS03370 PF00330 Aconitase family (aconitate hydratase) YSA_RS03370 PF00694 Aconitase C-terminal domain YSA_RS03375 PF00285 Citrate synthase, C-terminal domain YSA_RS03385 PF07729 FCD domain YSA_RS03385 PF00392 Bacterial regulatory proteins, gntR family YSA_RS03390 PF18030 RimK PreATP-grasp domain YSA_RS03390 PF08443 RimK-like ATP-grasp domain YSA_RS03405 PF04715 Anthranilate synthase component I, N terminal region YSA_RS03405 PF00425 chorismate binding enzyme YSA_RS03410 PF01507 Phosphoadenosine phosphosulfate reductase family YSA_RS03420 PF03466 LysR substrate binding domain YSA_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03425 PF00582 Universal stress protein family YSA_RS03430 PF02558 Ketopantoate reductase PanE/ApbA YSA_RS03430 PF08546 Ketopantoate reductase PanE/ApbA C terminal YSA_RS03435 PF00793 DAHP synthetase I family YSA_RS03445 PF11839 Alanine-zipper, major outer membrane lipoprotein YSA_RS03450 PF01476 LysM domain YSA_RS03450 PF03734 L,D-transpeptidase catalytic domain YSA_RS03450 PF17969 L,D-transpeptidase C-terminal domain YSA_RS03460 PF13472 GDSL-like Lipase/Acylhydrolase family YSA_RS03465 PF00005 ABC transporter YSA_RS03475 PF03449 Transcription elongation factor, N-terminal YSA_RS03475 PF01272 Transcription elongation factor, GreA/GreB, C-term YSA_RS03485 PF07681 DoxX YSA_RS03490 PF01464 Transglycosylase SLT domain YSA_RS03490 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS03495 PF01026 TatD related DNase YSA_RS03500 PF02743 Cache domain YSA_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS03500 PF00672 HAMP domain YSA_RS03525 PF01734 Patatin-like phospholipase YSA_RS03530 PF05698 Bacterial trigger factor protein (TF) C-terminus YSA_RS03535 PF00216 Bacterial DNA-binding protein YSA_RS03540 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS03540 PF02190 ATP-dependent protease La (LON) substrate-binding domain YSA_RS03540 PF05362 Lon protease (S16) C-terminal proteolytic domain YSA_RS03545 PF06689 ClpX C4-type zinc finger YSA_RS03545 PF10431 C-terminal, D2-small domain, of ClpB protein YSA_RS03545 PF07724 AAA domain (Cdc48 subfamily) YSA_RS03550 PF00574 Clp protease YSA_RS03555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS03555 PF05698 Bacterial trigger factor protein (TF) C-terminus YSA_RS03555 PF05697 Bacterial trigger factor protein (TF) YSA_RS03585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YSA_RS03585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YSA_RS03600 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS03605 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS03610 PF00005 ABC transporter YSA_RS03610 PF08402 TOBE domain YSA_RS03615 PF00005 ABC transporter YSA_RS03615 PF17912 MalK OB fold domain YSA_RS03620 PF01590 GAF domain YSA_RS03620 PF00158 Sigma-54 interaction domain YSA_RS03620 PF02954 Bacterial regulatory protein, Fis family YSA_RS03625 PF03707 Bacterial signalling protein N terminal repeat YSA_RS03625 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS03625 PF00563 EAL domain YSA_RS03630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS03630 PF08447 PAS fold YSA_RS03640 PF00375 Sodium:dicarboxylate symporter family YSA_RS03645 PF07729 FCD domain YSA_RS03645 PF00392 Bacterial regulatory proteins, gntR family YSA_RS03665 PF03466 LysR substrate binding domain YSA_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS03670 PF00672 HAMP domain YSA_RS03670 PF02743 Cache domain YSA_RS03680 PF01042 Endoribonuclease L-PSP YSA_RS03685 PF01266 FAD dependent oxidoreductase YSA_RS03695 PF01925 Sulfite exporter TauE/SafE YSA_RS03705 PF07715 TonB-dependent Receptor Plug Domain YSA_RS03705 PF00593 TonB dependent receptor YSA_RS03710 PF07690 Major Facilitator Superfamily YSA_RS03715 PF06472 ABC transporter transmembrane region 2 YSA_RS03715 PF00005 ABC transporter YSA_RS03745 PF00892 EamA-like transporter family YSA_RS03780 PF00857 Isochorismatase family YSA_RS03785 PF01381 Helix-turn-helix YSA_RS03795 PF00361 Proton-conducting membrane transporter YSA_RS03795 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YSA_RS03795 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter YSA_RS03795 PF13244 Domain of unknown function (DUF4040) YSA_RS03800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YSA_RS03805 PF00361 Proton-conducting membrane transporter YSA_RS03815 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) YSA_RS03820 PF03334 Na+/H+ antiporter subunit YSA_RS03840 PF01258 Prokaryotic dksA/traR C4-type zinc finger YSA_RS03850 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS03855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS03855 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS03855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS03860 PF00108 Thiolase, N-terminal domain YSA_RS03860 PF02803 Thiolase, C-terminal domain YSA_RS03865 PF00106 short chain dehydrogenase YSA_RS03870 PF00501 AMP-binding enzyme YSA_RS03870 PF13193 AMP-binding enzyme C-terminal domain YSA_RS03880 PF12833 Helix-turn-helix domain YSA_RS03885 PF03466 LysR substrate binding domain YSA_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03890 PF00266 Aminotransferase class-V YSA_RS03895 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS03910 PF16325 Peptidase family U32 C-terminal domain YSA_RS03910 PF01136 Peptidase family U32 YSA_RS03925 PF09335 SNARE associated Golgi protein YSA_RS03930 PF00561 alpha/beta hydrolase fold YSA_RS03940 PF03969 AFG1-like ATPase YSA_RS03945 PF07995 Glucose / Sorbosone dehydrogenase YSA_RS03955 PF00491 Arginase family YSA_RS03960 PF13416 Bacterial extracellular solute-binding protein YSA_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS03965 PF03466 LysR substrate binding domain YSA_RS03970 PF07715 TonB-dependent Receptor Plug Domain YSA_RS03970 PF00593 TonB dependent receptor YSA_RS03975 PF04542 Sigma-70 region 2 YSA_RS03975 PF08281 Sigma-70, region 4 YSA_RS03995 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) YSA_RS04000 PF00582 Universal stress protein family YSA_RS04010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS04010 PF12838 4Fe-4S dicluster domain YSA_RS04010 PF01568 Molydopterin dinucleotide binding domain YSA_RS04010 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YSA_RS04010 PF00384 Molybdopterin oxidoreductase YSA_RS04015 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YSA_RS04015 PF10531 SLBB domain YSA_RS04015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YSA_RS04030 PF01381 Helix-turn-helix YSA_RS04035 PF00202 Aminotransferase class-III YSA_RS04040 PF07722 Peptidase C26 YSA_RS04045 PF00120 Glutamine synthetase, catalytic domain YSA_RS04050 PF01381 Helix-turn-helix YSA_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04055 PF03466 LysR substrate binding domain YSA_RS04080 PF00440 Bacterial regulatory proteins, tetR family YSA_RS04095 PF01810 LysE type translocator YSA_RS04105 PF00872 Transposase, Mutator family YSA_RS04115 PF01207 Dihydrouridine synthase (Dus) YSA_RS04120 PF00923 Transaldolase/Fructose-6-phosphate aldolase YSA_RS04135 PF00196 Bacterial regulatory proteins, luxR family YSA_RS04135 PF00072 Response regulator receiver domain YSA_RS04145 PF04333 MlaA lipoprotein YSA_RS04160 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YSA_RS04160 PF14489 QueF-like protein YSA_RS04170 PF00072 Response regulator receiver domain YSA_RS04170 PF00486 Transcriptional regulatory protein, C terminal YSA_RS04175 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS04175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS04175 PF00672 HAMP domain YSA_RS04180 PF12704 MacB-like periplasmic core domain YSA_RS04180 PF02687 FtsX-like permease family YSA_RS04185 PF00005 ABC transporter YSA_RS04190 PF12704 MacB-like periplasmic core domain YSA_RS04190 PF02687 FtsX-like permease family YSA_RS04200 PF03009 Glycerophosphoryl diester phosphodiesterase family YSA_RS04205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS04210 PF02424 ApbE family YSA_RS04215 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YSA_RS04215 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YSA_RS04220 PF00271 Helicase conserved C-terminal domain YSA_RS04220 PF00270 DEAD/DEAH box helicase YSA_RS04220 PF03461 TRCF domain YSA_RS04220 PF02559 CarD-like/TRCF domain YSA_RS04220 PF17757 UvrB interaction domain YSA_RS04230 PF12419 SNF2 Helicase protein YSA_RS04230 PF00271 Helicase conserved C-terminal domain YSA_RS04230 PF00176 SNF2 family N-terminal domain YSA_RS04235 PF00933 Glycosyl hydrolase family 3 N terminal domain YSA_RS04240 PF00440 Bacterial regulatory proteins, tetR family YSA_RS04245 PF00717 Peptidase S24-like YSA_RS04245 PF01726 LexA DNA binding domain YSA_RS04250 PF03846 Cell division inhibitor SulA YSA_RS04265 PF08272 Topoisomerase I zinc-ribbon-like YSA_RS04265 PF01131 DNA topoisomerase YSA_RS04265 PF01751 Toprim domain YSA_RS04265 PF01396 Topoisomerase DNA binding C4 zinc finger YSA_RS04275 PF02803 Thiolase, C-terminal domain YSA_RS04275 PF00108 Thiolase, N-terminal domain YSA_RS04280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YSA_RS04280 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS04280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YSA_RS04290 PF00582 Universal stress protein family YSA_RS04295 PF16326 ABC transporter C-terminal domain YSA_RS04295 PF00005 ABC transporter YSA_RS04295 PF12848 ABC transporter YSA_RS04300 PF01464 Transglycosylase SLT domain YSA_RS04300 PF14718 Soluble lytic murein transglycosylase L domain YSA_RS04310 PF03476 MOSC N-terminal beta barrel domain YSA_RS04310 PF03473 MOSC domain YSA_RS04310 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS04315 PF01584 CheW-like domain YSA_RS04315 PF00072 Response regulator receiver domain YSA_RS04325 PF05231 MASE1 YSA_RS04325 PF07730 Histidine kinase YSA_RS04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS04330 PF00072 Response regulator receiver domain YSA_RS04330 PF00196 Bacterial regulatory proteins, luxR family YSA_RS04335 PF00781 Diacylglycerol kinase catalytic domain YSA_RS04340 PF13439 Glycosyltransferase Family 4 YSA_RS04345 PF03453 MoeA N-terminal region (domain I and II) YSA_RS04345 PF00994 Probable molybdopterin binding domain YSA_RS04345 PF03454 MoeA C-terminal region (domain IV) YSA_RS04350 PF00994 Probable molybdopterin binding domain YSA_RS04365 PF00672 HAMP domain YSA_RS04365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS04370 PF00005 ABC transporter YSA_RS04370 PF00664 ABC transporter transmembrane region YSA_RS04375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS04375 PF11890 Domain of unknown function (DUF3410) YSA_RS04375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS04380 PF01206 Sulfurtransferase TusA YSA_RS04390 PF18125 RlmM ferredoxin-like domain YSA_RS04390 PF01728 FtsJ-like methyltransferase YSA_RS04395 PF00330 Aconitase family (aconitate hydratase) YSA_RS04395 PF00694 Aconitase C-terminal domain YSA_RS04400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS04400 PF08447 PAS fold YSA_RS04405 PF01479 S4 domain YSA_RS04405 PF00849 RNA pseudouridylate synthase YSA_RS04415 PF08291 Peptidase M15 YSA_RS04415 PF01471 Putative peptidoglycan binding domain YSA_RS04425 PF00909 Ammonium Transporter Family YSA_RS04445 PF01966 HD domain YSA_RS04450 PF00196 Bacterial regulatory proteins, luxR family YSA_RS04450 PF00072 Response regulator receiver domain YSA_RS04455 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS04455 PF00989 PAS fold YSA_RS04455 PF01627 Hpt domain YSA_RS04455 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS04455 PF00072 Response regulator receiver domain YSA_RS04460 PF04320 Protein with unknown function (DUF469) YSA_RS04465 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YSA_RS04475 PF01170 Putative RNA methylase family UPF0020 YSA_RS04475 PF02926 THUMP domain YSA_RS04475 PF10672 S-adenosylmethionine-dependent methyltransferase YSA_RS04480 PF04957 Ribosome modulation factor YSA_RS04485 PF01180 Dihydroorotate dehydrogenase YSA_RS04490 PF00005 ABC transporter YSA_RS04495 PF08376 Nitrate and nitrite sensing YSA_RS04495 PF03861 ANTAR domain YSA_RS04500 PF07690 Major Facilitator Superfamily YSA_RS04505 PF00069 Protein kinase domain YSA_RS04510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS04515 PF05736 OprF membrane domain YSA_RS04515 PF00691 OmpA family YSA_RS04525 PF05552 Conserved TM helix YSA_RS04525 PF00924 Mechanosensitive ion channel YSA_RS04535 PF01544 CorA-like Mg2+ transporter protein YSA_RS04540 PF03737 Aldolase/RraA YSA_RS04550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YSA_RS04550 PF02896 PEP-utilising enzyme, TIM barrel domain YSA_RS04550 PF00391 PEP-utilising enzyme, mobile domain YSA_RS04555 PF03618 Kinase/pyrophosphorylase YSA_RS04560 PF05088 Bacterial NAD-glutamate dehydrogenase YSA_RS04570 PF03466 LysR substrate binding domain YSA_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YSA_RS04575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YSA_RS04580 PF08281 Sigma-70, region 4 YSA_RS04580 PF04542 Sigma-70 region 2 YSA_RS04590 PF07660 Secretin and TonB N terminus short domain YSA_RS04590 PF00593 TonB dependent receptor YSA_RS04590 PF07715 TonB-dependent Receptor Plug Domain YSA_RS04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04605 PF03466 LysR substrate binding domain YSA_RS04630 PF02321 Outer membrane efflux protein YSA_RS04640 PF13533 Biotin-lipoyl like YSA_RS04645 PF07690 Major Facilitator Superfamily YSA_RS04650 PF00392 Bacterial regulatory proteins, gntR family YSA_RS04650 PF07702 UTRA domain YSA_RS04655 PF00873 AcrB/AcrD/AcrF family YSA_RS04665 PF09278 MerR, DNA binding YSA_RS04665 PF00376 MerR family regulatory protein YSA_RS04670 PF05532 CsbD-like YSA_RS04675 PF03573 outer membrane porin, OprD family YSA_RS04680 PF03600 Citrate transporter YSA_RS04685 PF00375 Sodium:dicarboxylate symporter family YSA_RS04690 PF04303 PrpF protein YSA_RS04695 PF03466 LysR substrate binding domain YSA_RS04695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04710 PF01232 Mannitol dehydrogenase Rossmann domain YSA_RS04710 PF08125 Mannitol dehydrogenase C-terminal domain YSA_RS04715 PF02803 Thiolase, C-terminal domain YSA_RS04715 PF00108 Thiolase, N-terminal domain YSA_RS04725 PF00465 Iron-containing alcohol dehydrogenase YSA_RS04730 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS04730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS04730 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS04730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS04735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YSA_RS04735 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS04735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YSA_RS04740 PF03466 LysR substrate binding domain YSA_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04745 PF14863 Alkyl sulfatase dimerisation YSA_RS04745 PF14864 Alkyl sulfatase C-terminal YSA_RS04745 PF00753 Metallo-beta-lactamase superfamily YSA_RS04755 PF02656 Domain of unknown function (DUF202) YSA_RS04760 PF07044 Protein of unknown function (DUF1329) YSA_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS04770 PF03466 LysR substrate binding domain YSA_RS04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS04780 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS04780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS04785 PF00501 AMP-binding enzyme YSA_RS04785 PF13193 AMP-binding enzyme C-terminal domain YSA_RS04790 PF00596 Class II Aldolase and Adducin N-terminal domain YSA_RS04795 PF00701 Dihydrodipicolinate synthetase family YSA_RS04800 PF03594 Benzoate membrane transport protein YSA_RS04815 PF17863 AAA lid domain YSA_RS04815 PF07726 ATPase family associated with various cellular activities (AAA) YSA_RS04820 PF01882 Protein of unknown function DUF58 YSA_RS04845 PF10947 Protein of unknown function (DUF2628) YSA_RS04850 PF12320 Type 5 capsule protein repressor C-terminal domain YSA_RS04850 PF00149 Calcineurin-like phosphoesterase YSA_RS04865 PF10282 Lactonase, 7-bladed beta-propeller YSA_RS04885 PF01433 Peptidase family M1 domain YSA_RS04885 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YSA_RS04885 PF11940 Domain of unknown function (DUF3458) Ig-like fold YSA_RS04895 PF07023 Protein of unknown function (DUF1315) YSA_RS04900 PF01694 Rhomboid family YSA_RS04900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease YSA_RS04905 PF00149 Calcineurin-like phosphoesterase YSA_RS04910 PF01513 ATP-NAD kinase YSA_RS04920 PF01292 Prokaryotic cytochrome b561 YSA_RS04930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS04930 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS04935 PF12833 Helix-turn-helix domain YSA_RS04935 PF06719 AraC-type transcriptional regulator N-terminus YSA_RS04945 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS04945 PF00107 Zinc-binding dehydrogenase YSA_RS04950 PF00106 short chain dehydrogenase YSA_RS04960 PF12833 Helix-turn-helix domain YSA_RS04980 PF00106 short chain dehydrogenase YSA_RS04990 PF02753 Pili assembly chaperone PapD, C-terminal domain YSA_RS04990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YSA_RS05000 PF00072 Response regulator receiver domain YSA_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS05000 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS05000 PF09456 RcsC Alpha-Beta-Loop (ABL) YSA_RS05005 PF00563 EAL domain YSA_RS05005 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS05005 PF13426 PAS domain YSA_RS05010 PF09456 RcsC Alpha-Beta-Loop (ABL) YSA_RS05010 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS05010 PF00072 Response regulator receiver domain YSA_RS05015 PF00196 Bacterial regulatory proteins, luxR family YSA_RS05015 PF00072 Response regulator receiver domain YSA_RS05025 PF02753 Pili assembly chaperone PapD, C-terminal domain YSA_RS05025 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YSA_RS05030 PF13954 PapC N-terminal domain YSA_RS05030 PF00577 Outer membrane usher protein YSA_RS05030 PF13953 PapC C-terminal domain YSA_RS05040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YSA_RS05040 PF12833 Helix-turn-helix domain YSA_RS05080 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS05085 PF00156 Phosphoribosyl transferase domain YSA_RS05090 PF02674 Colicin V production protein YSA_RS05100 PF08245 Mur ligase middle domain YSA_RS05100 PF02875 Mur ligase family, glutamate ligase domain YSA_RS05105 PF01039 Carboxyl transferase domain YSA_RS05105 PF17848 Acetyl-coA carboxylase zinc finger domain YSA_RS05110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YSA_RS05115 PF01416 tRNA pseudouridine synthase YSA_RS05125 PF01118 Semialdehyde dehydrogenase, NAD binding domain YSA_RS05125 PF02774 Semialdehyde dehydrogenase, dimerisation domain YSA_RS05140 PF02774 Semialdehyde dehydrogenase, dimerisation domain YSA_RS05140 PF01118 Semialdehyde dehydrogenase, NAD binding domain YSA_RS05145 PF00180 Isocitrate/isopropylmalate dehydrogenase YSA_RS05150 PF08241 Methyltransferase domain YSA_RS05155 PF00694 Aconitase C-terminal domain YSA_RS05160 PF00330 Aconitase family (aconitate hydratase) YSA_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS05170 PF03707 Bacterial signalling protein N terminal repeat YSA_RS05170 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS05170 PF00563 EAL domain YSA_RS05175 PF00011 Hsp20/alpha crystallin family YSA_RS05180 PF01207 Dihydrouridine synthase (Dus) YSA_RS05190 PF00561 alpha/beta hydrolase fold YSA_RS05230 PF00749 tRNA synthetases class I (E and Q), catalytic domain YSA_RS05235 PF13533 Biotin-lipoyl like YSA_RS05240 PF07690 Major Facilitator Superfamily YSA_RS05245 PF17757 UvrB interaction domain YSA_RS05245 PF00271 Helicase conserved C-terminal domain YSA_RS05245 PF04851 Type III restriction enzyme, res subunit YSA_RS05245 PF02151 UvrB/uvrC motif YSA_RS05245 PF12344 Ultra-violet resistance protein B YSA_RS05250 PF00155 Aminotransferase class I and II YSA_RS05280 PF04055 Radical SAM superfamily YSA_RS05280 PF06463 Molybdenum Cofactor Synthesis C YSA_RS05285 PF00440 Bacterial regulatory proteins, tetR family YSA_RS05300 PF01026 TatD related DNase YSA_RS05305 PF09115 DNA polymerase III, delta subunit, C terminal YSA_RS05310 PF02223 Thymidylate kinase YSA_RS05315 PF02618 YceG-like family YSA_RS05320 PF01063 Amino-transferase class IV YSA_RS05325 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS05325 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS05330 PF00550 Phosphopantetheine attachment site YSA_RS05340 PF00698 Acyl transferase domain YSA_RS05345 PF02504 Fatty acid synthesis protein YSA_RS05350 PF01783 Ribosomal L32p protein family YSA_RS05355 PF02620 Large ribosomal RNA subunit accumulation protein YceD YSA_RS05360 PF02545 Maf-like protein YSA_RS05365 PF01343 Peptidase family S49 YSA_RS05365 PF06965 Na+/H+ antiporter 1 YSA_RS05370 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS05375 PF00849 RNA pseudouridylate synthase YSA_RS05375 PF01479 S4 domain YSA_RS05385 PF10150 Ribonuclease E/G family YSA_RS05385 PF12111 Polyribonucleotide phosphorylase C terminal YSA_RS05385 PF00575 S1 RNA binding domain YSA_RS05390 PF01565 FAD binding domain YSA_RS05390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YSA_RS05395 PF01451 Low molecular weight phosphotyrosine protein phosphatase YSA_RS05400 PF02348 Cytidylyltransferase YSA_RS05405 PF03966 Trm112p-like protein YSA_RS05410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YSA_RS05415 PF02472 Biopolymer transport protein ExbD/TolR YSA_RS05420 PF01618 MotA/TolQ/ExbB proton channel family YSA_RS05425 PF03772 Competence protein YSA_RS05425 PF00753 Metallo-beta-lactamase superfamily YSA_RS05435 PF01061 ABC-2 type transporter YSA_RS05440 PF00005 ABC transporter YSA_RS05445 PF13417 Glutathione S-transferase, N-terminal domain YSA_RS05445 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS05450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS05450 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS05450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS05450 PF09317 Domain of unknown function (DUF1974) YSA_RS05465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YSA_RS05465 PF02753 Pili assembly chaperone PapD, C-terminal domain YSA_RS05475 PF03212 Pertactin YSA_RS05475 PF16168 Adhesin of bacterial autotransporter system, probable stalk YSA_RS05475 PF13018 Extended Signal Peptide of Type V secretion system YSA_RS05475 PF03797 Autotransporter beta-domain YSA_RS05515 PF13954 PapC N-terminal domain YSA_RS05515 PF00577 Outer membrane usher protein YSA_RS05515 PF13953 PapC C-terminal domain YSA_RS05560 PF13185 GAF domain YSA_RS05570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS05570 PF01627 Hpt domain YSA_RS05570 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS05570 PF00072 Response regulator receiver domain YSA_RS05570 PF00672 HAMP domain YSA_RS05575 PF00255 Glutathione peroxidase YSA_RS05580 PF01641 SelR domain YSA_RS05585 PF00155 Aminotransferase class I and II YSA_RS05595 PF01435 Peptidase family M48 YSA_RS05600 PF05724 Thiopurine S-methyltransferase (TPMT) YSA_RS05605 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YSA_RS05610 PF03880 DbpA RNA binding domain YSA_RS05610 PF00271 Helicase conserved C-terminal domain YSA_RS05610 PF00270 DEAD/DEAH box helicase YSA_RS05620 PF01474 Class-II DAHP synthetase family YSA_RS05640 PF03466 LysR substrate binding domain YSA_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS05650 PF03466 LysR substrate binding domain YSA_RS05655 PF01047 MarR family YSA_RS05660 PF02566 OsmC-like protein YSA_RS05665 PF01132 Elongation factor P (EF-P) OB domain YSA_RS05665 PF08207 Elongation factor P (EF-P) KOW-like domain YSA_RS05665 PF09285 Elongation factor P, C-terminal YSA_RS05685 PF03466 LysR substrate binding domain YSA_RS05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS05695 PF03466 LysR substrate binding domain YSA_RS05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS05700 PF07690 Major Facilitator Superfamily YSA_RS05715 PF00593 TonB dependent receptor YSA_RS05715 PF07715 TonB-dependent Receptor Plug Domain YSA_RS05730 PF01553 Acyltransferase YSA_RS05735 PF01544 CorA-like Mg2+ transporter protein YSA_RS05740 PF00958 GMP synthase C terminal domain YSA_RS05740 PF00117 Glutamine amidotransferase class-I YSA_RS05760 PF00884 Sulfatase YSA_RS05770 PF02535 ZIP Zinc transporter YSA_RS05785 PF00023 Ankyrin repeat YSA_RS05785 PF12796 Ankyrin repeats (3 copies) YSA_RS05800 PF03079 ARD/ARD' family YSA_RS05805 PF12832 MFS_1 like family YSA_RS05810 PF01264 Chorismate synthase YSA_RS05825 PF05175 Methyltransferase small domain YSA_RS05840 PF01713 Smr domain YSA_RS05845 PF01227 GTP cyclohydrolase I YSA_RS05860 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS05860 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS05865 PF03594 Benzoate membrane transport protein YSA_RS05870 PF16591 Helical bimodular sensor domain YSA_RS05870 PF00672 HAMP domain YSA_RS05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS05885 PF16884 N-terminal domain of oxidoreductase YSA_RS05885 PF00107 Zinc-binding dehydrogenase YSA_RS05895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YSA_RS05935 PF00342 Phosphoglucose isomerase YSA_RS05940 PF00793 DAHP synthetase I family YSA_RS05945 PF01380 SIS domain YSA_RS05945 PF00571 CBS domain YSA_RS05950 PF02719 Polysaccharide biosynthesis protein YSA_RS05955 PF00953 Glycosyl transferase family 4 YSA_RS05960 PF01370 NAD dependent epimerase/dehydratase family YSA_RS05975 PF00534 Glycosyl transferases group 1 YSA_RS05980 PF16363 GDP-mannose 4,6 dehydratase YSA_RS05985 PF16363 GDP-mannose 4,6 dehydratase YSA_RS05990 PF02321 Outer membrane efflux protein YSA_RS05995 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS05995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS06000 PF00005 ABC transporter YSA_RS06000 PF00664 ABC transporter transmembrane region YSA_RS06020 PF00535 Glycosyl transferase family 2 YSA_RS06030 PF13439 Glycosyltransferase Family 4 YSA_RS06030 PF00534 Glycosyl transferases group 1 YSA_RS06035 PF16363 GDP-mannose 4,6 dehydratase YSA_RS06045 PF16363 GDP-mannose 4,6 dehydratase YSA_RS06050 PF04321 RmlD substrate binding domain YSA_RS06055 PF00483 Nucleotidyl transferase YSA_RS06060 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YSA_RS06070 PF13439 Glycosyltransferase Family 4 YSA_RS06070 PF00534 Glycosyl transferases group 1 YSA_RS06075 PF00069 Protein kinase domain YSA_RS06075 PF13847 Methyltransferase domain YSA_RS06080 PF00005 ABC transporter YSA_RS06090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YSA_RS06090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YSA_RS06090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YSA_RS06090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YSA_RS06095 PF00483 Nucleotidyl transferase YSA_RS06095 PF01050 Mannose-6-phosphate isomerase YSA_RS06100 PF01757 Acyltransferase family YSA_RS06105 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YSA_RS06105 PF00753 Metallo-beta-lactamase superfamily YSA_RS06105 PF10996 Beta-Casp domain YSA_RS06115 PF00216 Bacterial DNA-binding protein YSA_RS06125 PF00575 S1 RNA binding domain YSA_RS06130 PF02224 Cytidylate kinase YSA_RS06135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YSA_RS06140 PF01842 ACT domain YSA_RS06140 PF00800 Prephenate dehydratase YSA_RS06140 PF01817 Chorismate mutase type II YSA_RS06145 PF00266 Aminotransferase class-V YSA_RS06155 PF00521 DNA gyrase/topoisomerase IV, subunit A YSA_RS06155 PF03989 DNA gyrase C-terminal domain, beta-propeller YSA_RS06160 PF01008 Initiation factor 2 subunit family YSA_RS06170 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS06175 PF00106 short chain dehydrogenase YSA_RS06185 PF00563 EAL domain YSA_RS06185 PF08448 PAS fold YSA_RS06185 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS06190 PF00664 ABC transporter transmembrane region YSA_RS06190 PF00005 ABC transporter YSA_RS06200 PF17773 UPF0176 acylphosphatase like domain YSA_RS06200 PF00581 Rhodanese-like domain YSA_RS06205 PF01722 BolA-like protein YSA_RS06215 PF00206 Lyase YSA_RS06215 PF10415 Fumarase C C-terminus YSA_RS06220 PF00892 EamA-like transporter family YSA_RS06225 PF03976 Polyphosphate kinase 2 (PPK2) YSA_RS06230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YSA_RS06230 PF01266 FAD dependent oxidoreductase YSA_RS06235 PF13537 Glutamine amidotransferase domain YSA_RS06235 PF00733 Asparagine synthase YSA_RS06240 PF08245 Mur ligase middle domain YSA_RS06240 PF02875 Mur ligase family, glutamate ligase domain YSA_RS06240 PF08443 RimK-like ATP-grasp domain YSA_RS06245 PF05343 M42 glutamyl aminopeptidase YSA_RS06250 PF06794 Uncharacterised protein family (UPF0270) YSA_RS06255 PF02599 Global regulator protein family YSA_RS06260 PF00106 short chain dehydrogenase YSA_RS06295 PF00474 Sodium:solute symporter family YSA_RS06300 PF04341 Protein of unknown function, DUF485 YSA_RS06305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YSA_RS06325 PF04333 MlaA lipoprotein YSA_RS06335 PF03279 Bacterial lipid A biosynthesis acyltransferase YSA_RS06340 PF03775 Septum formation inhibitor MinC, C-terminal domain YSA_RS06340 PF05209 Septum formation inhibitor MinC, N-terminal domain YSA_RS06345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YSA_RS06350 PF03776 Septum formation topological specificity factor MinE YSA_RS06355 PF00849 RNA pseudouridylate synthase YSA_RS06360 PF02127 Aminopeptidase I zinc metalloprotease (M18) YSA_RS06365 PF00924 Mechanosensitive ion channel YSA_RS06370 PF07702 UTRA domain YSA_RS06370 PF00392 Bacterial regulatory proteins, gntR family YSA_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS06395 PF08402 TOBE domain YSA_RS06395 PF00005 ABC transporter YSA_RS06405 PF14765 Polyketide synthase dehydratase YSA_RS06405 PF00550 Phosphopantetheine attachment site YSA_RS06405 PF00698 Acyl transferase domain YSA_RS06405 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS06405 PF09277 Erythronolide synthase, docking YSA_RS06405 PF16197 Ketoacyl-synthetase C-terminal extension YSA_RS06405 PF08990 Erythronolide synthase docking YSA_RS06405 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS06405 PF08659 KR domain YSA_RS06405 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS06410 PF11818 C-terminal domain of tail specific protease (DUF3340) YSA_RS06410 PF17804 Tail specific protease N-terminal domain YSA_RS06410 PF03572 Peptidase family S41 YSA_RS06410 PF00595 PDZ domain YSA_RS06415 PF03707 Bacterial signalling protein N terminal repeat YSA_RS06415 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS06415 PF00563 EAL domain YSA_RS06415 PF13188 PAS domain YSA_RS06430 PF06803 Protein of unknown function (DUF1232) YSA_RS06435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YSA_RS06435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS06440 PF03466 LysR substrate binding domain YSA_RS06455 PF02805 Metal binding domain of Ada YSA_RS06455 PF12833 Helix-turn-helix domain YSA_RS06460 PF07690 Major Facilitator Superfamily YSA_RS06465 PF01557 Fumarylacetoacetate (FAA) hydrolase family YSA_RS06475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS06475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS06485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YSA_RS06485 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS06485 PF13806 Rieske-like [2Fe-2S] domain YSA_RS06485 PF04324 BFD-like [2Fe-2S] binding domain YSA_RS06485 PF18267 Rubredoxin NAD+ reductase C-terminal domain YSA_RS06485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YSA_RS06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS06490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YSA_RS06490 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YSA_RS06490 PF04324 BFD-like [2Fe-2S] binding domain YSA_RS06490 PF18267 Rubredoxin NAD+ reductase C-terminal domain YSA_RS06490 PF13806 Rieske-like [2Fe-2S] domain YSA_RS06495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS06495 PF00384 Molybdopterin oxidoreductase YSA_RS06495 PF01568 Molydopterin dinucleotide binding domain YSA_RS06505 PF00557 Metallopeptidase family M24 YSA_RS06530 PF04381 Putative exonuclease, RdgC YSA_RS06535 PF00893 Small Multidrug Resistance protein YSA_RS06540 PF07690 Major Facilitator Superfamily YSA_RS06550 PF07690 Major Facilitator Superfamily YSA_RS06555 PF00392 Bacterial regulatory proteins, gntR family YSA_RS06555 PF07702 UTRA domain YSA_RS06560 PF07690 Major Facilitator Superfamily YSA_RS06565 PF00672 HAMP domain YSA_RS06565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS06565 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS06570 PF02646 RmuC family YSA_RS06590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YSA_RS06595 PF03466 LysR substrate binding domain YSA_RS06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS06605 PF00255 Glutathione peroxidase YSA_RS06615 PF01047 MarR family YSA_RS06625 PF02654 Cobalamin-5-phosphate synthase YSA_RS06630 PF00300 Histidine phosphatase superfamily (branch 1) YSA_RS06635 PF02277 Phosphoribosyltransferase YSA_RS06640 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YSA_RS06645 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YSA_RS06645 PF07685 CobB/CobQ-like glutamine amidotransferase domain YSA_RS06650 PF00155 Aminotransferase class I and II YSA_RS06655 PF03186 CobD/Cbib protein YSA_RS06655 PF17113 Regulatory signalling modulator protein AmpE YSA_RS06660 PF00881 Nitroreductase family YSA_RS06665 PF07685 CobB/CobQ-like glutamine amidotransferase domain YSA_RS06665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YSA_RS06670 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YSA_RS06670 PF12557 Cob(I)alamin adenosyltransferase N terminal YSA_RS06675 PF00877 NlpC/P60 family YSA_RS06680 PF00877 NlpC/P60 family YSA_RS06685 PF00308 Bacterial dnaA protein YSA_RS06690 PF01594 AI-2E family transporter YSA_RS06705 PF00586 AIR synthase related protein, N-terminal domain YSA_RS06705 PF02769 AIR synthase related protein, C-terminal domain YSA_RS06710 PF00551 Formyl transferase YSA_RS06720 PF01610 Transposase YSA_RS06720 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 YSA_RS06720 PF13542 Helix-turn-helix domain of transposase family ISL3 YSA_RS06730 PF05199 GMC oxidoreductase YSA_RS06730 PF00732 GMC oxidoreductase YSA_RS06745 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YSA_RS06750 PF03819 MazG nucleotide pyrophosphohydrolase domain YSA_RS06755 PF02824 TGS domain YSA_RS06755 PF04607 Region found in RelA / SpoT proteins YSA_RS06755 PF13291 ACT domain YSA_RS06765 PF05958 tRNA (Uracil-5-)-methyltransferase YSA_RS06765 PF01938 TRAM domain YSA_RS06770 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS06775 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS06775 PF16750 Sensor domain of 2-component histidine kinase YSA_RS06775 PF00672 HAMP domain YSA_RS06780 PF00486 Transcriptional regulatory protein, C terminal YSA_RS06780 PF00072 Response regulator receiver domain YSA_RS06785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS06785 PF00072 Response regulator receiver domain YSA_RS06785 PF01627 Hpt domain YSA_RS06785 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS06785 PF00672 HAMP domain YSA_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS06790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS06790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS06805 PF00085 Thioredoxin YSA_RS06810 PF03960 ArsC family YSA_RS06815 PF03358 NADPH-dependent FMN reductase YSA_RS06835 PF01171 PP-loop family YSA_RS06840 PF04893 Yip1 domain YSA_RS06845 PF10263 SprT-like family YSA_RS06850 PF00175 Oxidoreductase NAD-binding domain YSA_RS06850 PF00970 Oxidoreductase FAD-binding domain YSA_RS06855 PF03466 LysR substrate binding domain YSA_RS06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS06860 PF01219 Prokaryotic diacylglycerol kinase YSA_RS06865 PF00196 Bacterial regulatory proteins, luxR family YSA_RS06865 PF00072 Response regulator receiver domain YSA_RS06870 PF03942 DTW domain YSA_RS06895 PF02631 RecX family YSA_RS06900 PF00154 recA bacterial DNA recombination protein YSA_RS06905 PF02464 Competence-damaged protein YSA_RS06915 PF05188 MutS domain II YSA_RS06915 PF05190 MutS family domain IV YSA_RS06915 PF05192 MutS domain III YSA_RS06915 PF01624 MutS domain I YSA_RS06915 PF00488 MutS domain V YSA_RS06920 PF11953 Domain of unknown function (DUF3470) YSA_RS06920 PF00037 4Fe-4S binding domain YSA_RS06925 PF04539 Sigma-70 region 3 YSA_RS06925 PF00140 Sigma-70 factor, region 1.2 YSA_RS06925 PF04545 Sigma-70, region 4 YSA_RS06925 PF04542 Sigma-70 region 2 YSA_RS06930 PF01551 Peptidase family M23 YSA_RS06930 PF01476 LysM domain YSA_RS06940 PF01975 Survival protein SurE YSA_RS06945 PF01142 tRNA pseudouridine synthase D (TruD) YSA_RS06950 PF02542 YgbB family YSA_RS06955 PF00756 Putative esterase YSA_RS06960 PF00107 Zinc-binding dehydrogenase YSA_RS06960 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS06965 PF03466 LysR substrate binding domain YSA_RS06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS06970 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YSA_RS06975 PF04977 Septum formation initiator YSA_RS06980 PF03952 Enolase, N-terminal domain YSA_RS06980 PF00113 Enolase, C-terminal TIM barrel domain YSA_RS06985 PF00793 DAHP synthetase I family YSA_RS06990 PF06418 CTP synthase N-terminus YSA_RS06990 PF00117 Glutamine amidotransferase class-I YSA_RS06995 PF09179 TilS substrate binding domain YSA_RS06995 PF11734 TilS substrate C-terminal domain YSA_RS06995 PF01171 PP-loop family YSA_RS07000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YSA_RS07005 PF07733 Bacterial DNA polymerase III alpha NTPase domain YSA_RS07005 PF01336 OB-fold nucleic acid binding domain YSA_RS07005 PF02811 PHP domain YSA_RS07005 PF14579 Helix-hairpin-helix motif YSA_RS07005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YSA_RS07010 PF01351 Ribonuclease HII YSA_RS07015 PF02684 Lipid-A-disaccharide synthetase YSA_RS07020 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YSA_RS07020 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS07025 PF07977 FabA-like domain YSA_RS07030 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YSA_RS07030 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS07035 PF03938 Outer membrane protein (OmpH-like) YSA_RS07040 PF07244 Surface antigen variable number repeat YSA_RS07040 PF01103 Surface antigen YSA_RS07045 PF13180 PDZ domain YSA_RS07045 PF17820 PDZ domain YSA_RS07045 PF02163 Peptidase family M50 YSA_RS07050 PF13288 DXP reductoisomerase C-terminal domain YSA_RS07050 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YSA_RS07050 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YSA_RS07060 PF01255 Putative undecaprenyl diphosphate synthase YSA_RS07065 PF01765 Ribosome recycling factor YSA_RS07070 PF00696 Amino acid kinase family YSA_RS07075 PF00889 Elongation factor TS YSA_RS07080 PF00318 Ribosomal protein S2 YSA_RS07085 PF00557 Metallopeptidase family M24 YSA_RS07090 PF01909 Nucleotidyltransferase domain YSA_RS07090 PF01966 HD domain YSA_RS07090 PF08335 GlnD PII-uridylyltransferase YSA_RS07090 PF01842 ACT domain YSA_RS07095 PF00155 Aminotransferase class I and II YSA_RS07105 PF00999 Sodium/hydrogen exchanger family YSA_RS07120 PF03960 ArsC family YSA_RS07125 PF14602 Hexapeptide repeat of succinyl-transferase YSA_RS07125 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle YSA_RS07130 PF00266 Aminotransferase class-V YSA_RS07135 PF02657 Fe-S metabolism associated domain YSA_RS07140 PF00899 ThiF family YSA_RS07145 PF00535 Glycosyl transferase family 2 YSA_RS07145 PF07238 PilZ domain YSA_RS07145 PF03552 Cellulose synthase YSA_RS07150 PF07687 Peptidase dimerisation domain YSA_RS07150 PF01546 Peptidase family M20/M25/M40 YSA_RS07155 PF13847 Methyltransferase domain YSA_RS07165 PF00313 'Cold-shock' DNA-binding domain YSA_RS07170 PF01553 Acyltransferase YSA_RS07185 PF00873 AcrB/AcrD/AcrF family YSA_RS07190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS07200 PF04445 Putative SAM-dependent methyltransferase YSA_RS07230 PF00814 Glycoprotease family YSA_RS07235 PF05191 Adenylate kinase, active site lid YSA_RS07240 PF00311 Phosphoenolpyruvate carboxylase YSA_RS07260 PF13488 Glycine zipper YSA_RS07260 PF00691 OmpA family YSA_RS07270 PF12146 Serine aminopeptidase, S33 YSA_RS07290 PF00152 tRNA synthetases class II (D, K and N) YSA_RS07290 PF01336 OB-fold nucleic acid binding domain YSA_RS07300 PF00360 Phytochrome region YSA_RS07300 PF01590 GAF domain YSA_RS07300 PF00563 EAL domain YSA_RS07300 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS07305 PF00072 Response regulator receiver domain YSA_RS07305 PF01339 CheB methylesterase YSA_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS07310 PF00072 Response regulator receiver domain YSA_RS07310 PF01627 Hpt domain YSA_RS07310 PF01584 CheW-like domain YSA_RS07320 PF01739 CheR methyltransferase, SAM binding domain YSA_RS07330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS07330 PF00672 HAMP domain YSA_RS07330 PF12729 Four helix bundle sensory module for signal transduction YSA_RS07335 PF04391 Protein of unknown function (DUF533) YSA_RS07340 PF13416 Bacterial extracellular solute-binding protein YSA_RS07345 PF08402 TOBE domain YSA_RS07345 PF00005 ABC transporter YSA_RS07350 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS07355 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS07360 PF00171 Aldehyde dehydrogenase family YSA_RS07375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS07380 PF02272 DHHA1 domain YSA_RS07380 PF17768 RecJ OB domain YSA_RS07380 PF01368 DHH family YSA_RS07385 PF07152 YaeQ protein YSA_RS07390 PF02515 CoA-transferase family III YSA_RS07410 PF14821 Threonine synthase N terminus YSA_RS07410 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS07415 PF03447 Homoserine dehydrogenase, NAD binding domain YSA_RS07415 PF00742 Homoserine dehydrogenase YSA_RS07415 PF01842 ACT domain YSA_RS07420 PF10411 Disulfide bond isomerase protein N-terminus YSA_RS07420 PF13098 Thioredoxin-like domain YSA_RS07425 PF00589 Phage integrase family YSA_RS07425 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS07435 PF03061 Thioesterase superfamily YSA_RS07440 PF01245 Ribosomal protein L19 YSA_RS07445 PF01746 tRNA (Guanine-1)-methyltransferase YSA_RS07450 PF01782 RimM N-terminal domain YSA_RS07450 PF05239 PRC-barrel domain YSA_RS07455 PF00886 Ribosomal protein S16 YSA_RS07460 PF02978 Signal peptide binding domain YSA_RS07460 PF02881 SRP54-type protein, helical bundle domain YSA_RS07460 PF00448 SRP54-type protein, GTPase domain YSA_RS07470 PF00571 CBS domain YSA_RS07470 PF03471 Transporter associated domain YSA_RS07470 PF01595 Cyclin M transmembrane N-terminal domain YSA_RS07475 PF00083 Sugar (and other) transporter YSA_RS07475 PF07690 Major Facilitator Superfamily YSA_RS07480 PF02222 ATP-grasp domain YSA_RS07480 PF01370 NAD dependent epimerase/dehydratase family YSA_RS07495 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS07500 PF00293 NUDIX domain YSA_RS07505 PF00293 NUDIX domain YSA_RS07505 PF09297 NADH pyrophosphatase zinc ribbon domain YSA_RS07515 PF17287 POTRA domain YSA_RS07515 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YSA_RS07515 PF08479 POTRA domain, ShlB-type YSA_RS07520 PF05860 haemagglutination activity domain YSA_RS07520 PF13332 Hemagglutinin repeat YSA_RS07530 PF09905 DNA-binding protein VF530 YSA_RS07535 PF00593 TonB dependent receptor YSA_RS07535 PF07715 TonB-dependent Receptor Plug Domain YSA_RS07540 PF04966 Carbohydrate-selective porin, OprB family YSA_RS07545 PF01011 PQQ enzyme repeat YSA_RS07550 PF02190 ATP-dependent protease La (LON) substrate-binding domain YSA_RS07550 PF05362 Lon protease (S16) C-terminal proteolytic domain YSA_RS07550 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS07560 PF13649 Methyltransferase domain YSA_RS07565 PF08003 Protein of unknown function (DUF1698) YSA_RS07575 PF00072 Response regulator receiver domain YSA_RS07575 PF00486 Transcriptional regulatory protein, C terminal YSA_RS07580 PF00672 HAMP domain YSA_RS07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS07580 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS07585 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YSA_RS07590 PF11967 Recombination protein O N terminal YSA_RS07590 PF02565 Recombination protein O C terminal YSA_RS07595 PF01926 50S ribosome-binding GTPase YSA_RS07595 PF07650 KH domain YSA_RS07600 PF00035 Double-stranded RNA binding motif YSA_RS07600 PF14622 Ribonuclease-III-like YSA_RS07605 PF10502 Signal peptidase, peptidase S26 YSA_RS07610 PF00679 Elongation factor G C-terminus YSA_RS07610 PF03144 Elongation factor Tu domain 2 YSA_RS07610 PF06421 GTP-binding protein LepA C-terminus YSA_RS07610 PF00009 Elongation factor Tu GTP binding domain YSA_RS07615 PF13180 PDZ domain YSA_RS07620 PF03888 MucB/RseB N-terminal domain YSA_RS07620 PF17188 MucB/RseB C-terminal domain YSA_RS07625 PF03872 Anti sigma-E protein RseA, N-terminal domain YSA_RS07625 PF03873 Anti sigma-E protein RseA, C-terminal domain YSA_RS07630 PF08281 Sigma-70, region 4 YSA_RS07630 PF04542 Sigma-70 region 2 YSA_RS07635 PF00890 FAD binding domain YSA_RS07635 PF02910 Fumarate reductase flavoprotein C-term YSA_RS07645 PF03937 Flavinator of succinate dehydrogenase YSA_RS07650 PF01571 Aminomethyltransferase folate-binding domain YSA_RS07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS07660 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS07665 PF00072 Response regulator receiver domain YSA_RS07665 PF00486 Transcriptional regulatory protein, C terminal YSA_RS07670 PF03573 outer membrane porin, OprD family YSA_RS07685 PF01970 Tripartite tricarboxylate transporter TctA family YSA_RS07690 PF05145 Transition state regulatory protein AbrB YSA_RS07700 PF03167 Uracil DNA glycosylase superfamily YSA_RS07715 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS07725 PF01479 S4 domain YSA_RS07725 PF00849 RNA pseudouridylate synthase YSA_RS07730 PF00561 alpha/beta hydrolase fold YSA_RS07740 PF00916 Sulfate permease family YSA_RS07740 PF01740 STAS domain YSA_RS07760 PF01915 Glycosyl hydrolase family 3 C-terminal domain YSA_RS07760 PF00933 Glycosyl hydrolase family 3 N terminal domain YSA_RS07760 PF14310 Fibronectin type III-like domain YSA_RS07765 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS07770 PF00072 Response regulator receiver domain YSA_RS07770 PF02954 Bacterial regulatory protein, Fis family YSA_RS07770 PF00158 Sigma-54 interaction domain YSA_RS07775 PF00083 Sugar (and other) transporter YSA_RS07805 PF12833 Helix-turn-helix domain YSA_RS07805 PF06719 AraC-type transcriptional regulator N-terminus YSA_RS07810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS07810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS07810 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS07815 PF03466 LysR substrate binding domain YSA_RS07815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS07820 PF13460 NAD(P)H-binding YSA_RS07825 PF03466 LysR substrate binding domain YSA_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS07835 PF07690 Major Facilitator Superfamily YSA_RS07840 PF00440 Bacterial regulatory proteins, tetR family YSA_RS07840 PF08361 MAATS-type transcriptional repressor, C-terminal region YSA_RS07845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS07845 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS07850 PF00873 AcrB/AcrD/AcrF family YSA_RS07855 PF02321 Outer membrane efflux protein YSA_RS07860 PF03573 outer membrane porin, OprD family YSA_RS07870 PF02627 Carboxymuconolactone decarboxylase family YSA_RS07875 PF12146 Serine aminopeptidase, S33 YSA_RS07880 PF10397 Adenylosuccinate lyase C-terminus YSA_RS07880 PF00206 Lyase YSA_RS07885 PF00083 Sugar (and other) transporter YSA_RS07890 PF00108 Thiolase, N-terminal domain YSA_RS07890 PF02803 Thiolase, C-terminal domain YSA_RS07895 PF07690 Major Facilitator Superfamily YSA_RS07900 PF01614 Bacterial transcriptional regulator YSA_RS07900 PF09339 IclR helix-turn-helix domain YSA_RS07915 PF01384 Phosphate transporter family YSA_RS07920 PF05872 Bacterial protein of unknown function (DUF853) YSA_RS07925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS07925 PF00672 HAMP domain YSA_RS07925 PF02743 Cache domain YSA_RS07930 PF13439 Glycosyltransferase Family 4 YSA_RS07930 PF00534 Glycosyl transferases group 1 YSA_RS07950 PF01842 ACT domain YSA_RS07950 PF00551 Formyl transferase YSA_RS07960 PF08411 Exonuclease C-terminal YSA_RS07960 PF00929 Exonuclease YSA_RS07975 PF00224 Pyruvate kinase, barrel domain YSA_RS07975 PF02887 Pyruvate kinase, alpha/beta domain YSA_RS07980 PF00118 TCP-1/cpn60 chaperonin family YSA_RS07985 PF00166 Chaperonin 10 Kd subunit YSA_RS07990 PF04186 FxsA cytoplasmic membrane protein YSA_RS08010 PF07690 Major Facilitator Superfamily YSA_RS08020 PF07690 Major Facilitator Superfamily YSA_RS08025 PF05552 Conserved TM helix YSA_RS08025 PF00924 Mechanosensitive ion channel YSA_RS08030 PF04461 Protein of unknown function (DUF520) YSA_RS08035 PF08546 Ketopantoate reductase PanE/ApbA C terminal YSA_RS08035 PF02558 Ketopantoate reductase PanE/ApbA YSA_RS08040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS08040 PF08448 PAS fold YSA_RS08040 PF00072 Response regulator receiver domain YSA_RS08040 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS08040 PF13188 PAS domain YSA_RS08045 PF01923 Cobalamin adenosyltransferase YSA_RS08055 PF00293 NUDIX domain YSA_RS08065 PF01960 ArgJ family YSA_RS08070 PF07517 SecA DEAD-like domain YSA_RS08070 PF02810 SEC-C motif YSA_RS08070 PF01043 SecA preprotein cross-linking domain YSA_RS08070 PF07516 SecA Wing and Scaffold domain YSA_RS08085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YSA_RS08090 PF00091 Tubulin/FtsZ family, GTPase domain YSA_RS08090 PF12327 FtsZ family, C-terminal domain YSA_RS08095 PF02491 SHS2 domain inserted in FTSA YSA_RS08100 PF03799 Cell division protein FtsQ YSA_RS08100 PF08478 POTRA domain, FtsQ-type YSA_RS08105 PF01820 D-ala D-ala ligase N-terminus YSA_RS08105 PF07478 D-ala D-ala ligase C-terminus YSA_RS08110 PF02875 Mur ligase family, glutamate ligase domain YSA_RS08110 PF08245 Mur ligase middle domain YSA_RS08110 PF01225 Mur ligase family, catalytic domain YSA_RS08115 PF03033 Glycosyltransferase family 28 N-terminal domain YSA_RS08115 PF04101 Glycosyltransferase family 28 C-terminal domain YSA_RS08120 PF01098 Cell cycle protein YSA_RS08125 PF02875 Mur ligase family, glutamate ligase domain YSA_RS08125 PF08245 Mur ligase middle domain YSA_RS08130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YSA_RS08130 PF00953 Glycosyl transferase family 4 YSA_RS08135 PF01225 Mur ligase family, catalytic domain YSA_RS08135 PF02875 Mur ligase family, glutamate ligase domain YSA_RS08135 PF08245 Mur ligase middle domain YSA_RS08140 PF08245 Mur ligase middle domain YSA_RS08140 PF02875 Mur ligase family, glutamate ligase domain YSA_RS08140 PF01225 Mur ligase family, catalytic domain YSA_RS08145 PF00905 Penicillin binding protein transpeptidase domain YSA_RS08145 PF03717 Penicillin-binding Protein dimerisation domain YSA_RS08150 PF04999 Cell division protein FtsL YSA_RS08155 PF01795 MraW methylase family YSA_RS08160 PF02381 MraZ protein, putative antitoxin-like YSA_RS08170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS08180 PF02021 Uncharacterised protein family UPF0102 YSA_RS08185 PF13580 SIS domain YSA_RS08190 PF04972 BON domain YSA_RS08195 PF04386 Stringent starvation protein B YSA_RS08200 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS08200 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS08205 PF02167 Cytochrome C1 family YSA_RS08210 PF00032 Cytochrome b(C-terminal)/b6/petD YSA_RS08210 PF00033 Cytochrome b/b6/petB YSA_RS08215 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal YSA_RS08215 PF00355 Rieske [2Fe-2S] domain YSA_RS08220 PF00380 Ribosomal protein S9/S16 YSA_RS08225 PF00572 Ribosomal protein L13 YSA_RS08230 PF00248 Aldo/keto reductase family YSA_RS08240 PF03969 AFG1-like ATPase YSA_RS08245 PF00579 tRNA synthetases class I (W and Y) YSA_RS08260 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS08265 PF13404 AsnC-type helix-turn-helix domain YSA_RS08265 PF01037 Lrp/AsnC ligand binding domain YSA_RS08270 PF06958 S-type Pyocin YSA_RS08275 PF01320 Colicin immunity protein / pyocin immunity protein YSA_RS08280 PF00009 Elongation factor Tu GTP binding domain YSA_RS08285 PF01507 Phosphoadenosine phosphosulfate reductase family YSA_RS08290 PF01784 NIF3 (NGG1p interacting factor 3) YSA_RS08295 PF13180 PDZ domain YSA_RS08300 PF00005 ABC transporter YSA_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS08315 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS08320 PF02230 Phospholipase/Carboxylesterase YSA_RS08325 PF00270 DEAD/DEAH box helicase YSA_RS08325 PF00271 Helicase conserved C-terminal domain YSA_RS08335 PF02391 MoaE protein YSA_RS08340 PF02597 ThiS family YSA_RS08345 PF01967 MoaC family YSA_RS08350 PF13638 PIN domain YSA_RS08350 PF02562 PhoH-like protein YSA_RS08360 PF03883 Peroxide stress protein YaaA YSA_RS08365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YSA_RS08365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YSA_RS08365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YSA_RS08375 PF07238 PilZ domain YSA_RS08380 PF08238 Sel1 repeat YSA_RS08385 PF13372 Alginate export YSA_RS08390 PF13229 Right handed beta helix region YSA_RS08395 PF16824 C-terminal carbohydrate-binding module YSA_RS08395 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX YSA_RS08400 PF05426 Alginate lyase YSA_RS08410 PF03062 MBOAT, membrane-bound O-acyltransferase family YSA_RS08415 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX YSA_RS08420 PF11182 Alginate O-acetyl transferase AlgF YSA_RS08425 PF00483 Nucleotidyl transferase YSA_RS08425 PF01050 Mannose-6-phosphate isomerase YSA_RS08440 PF00106 short chain dehydrogenase YSA_RS08445 PF02321 Outer membrane efflux protein YSA_RS08450 PF13533 Biotin-lipoyl like YSA_RS08455 PF07690 Major Facilitator Superfamily YSA_RS08460 PF03466 LysR substrate binding domain YSA_RS08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS08470 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS08480 PF04632 Fusaric acid resistance protein family YSA_RS08485 PF02321 Outer membrane efflux protein YSA_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08490 PF03466 LysR substrate binding domain YSA_RS08495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS08495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS08500 PF00892 EamA-like transporter family YSA_RS08505 PF12833 Helix-turn-helix domain YSA_RS08505 PF06445 GyrI-like small molecule binding domain YSA_RS08510 PF00593 TonB dependent receptor YSA_RS08510 PF07715 TonB-dependent Receptor Plug Domain YSA_RS08550 PF06146 Phosphate-starvation-inducible E YSA_RS08570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YSA_RS08570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YSA_RS08575 PF13369 Transglutaminase-like superfamily YSA_RS08580 PF13417 Glutathione S-transferase, N-terminal domain YSA_RS08585 PF01557 Fumarylacetoacetate (FAA) hydrolase family YSA_RS08590 PF04209 homogentisate 1,2-dioxygenase YSA_RS08605 PF12697 Alpha/beta hydrolase family YSA_RS08610 PF04172 LrgB-like family YSA_RS08615 PF03788 LrgA family YSA_RS08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08620 PF03466 LysR substrate binding domain YSA_RS08625 PF00258 Flavodoxin YSA_RS08630 PF01740 STAS domain YSA_RS08630 PF13426 PAS domain YSA_RS08640 PF13411 MerR HTH family regulatory protein YSA_RS08675 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YSA_RS08675 PF12241 Trans-2-enoyl-CoA reductase catalytic region YSA_RS08675 PF07055 Enoyl reductase FAD binding domain YSA_RS08680 PF00108 Thiolase, N-terminal domain YSA_RS08680 PF02803 Thiolase, C-terminal domain YSA_RS08685 PF01717 Cobalamin-independent synthase, Catalytic domain YSA_RS08685 PF08267 Cobalamin-independent synthase, N-terminal domain YSA_RS08695 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS08695 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS08700 PF04328 Selenoprotein, putative YSA_RS08705 PF13722 5TM C-terminal transporter carbon starvation CstA YSA_RS08705 PF02554 Carbon starvation protein CstA YSA_RS08710 PF07238 PilZ domain YSA_RS08715 PF00860 Permease family YSA_RS08720 PF18073 Rubredoxin metal binding domain YSA_RS08725 PF01741 Large-conductance mechanosensitive channel, MscL YSA_RS08735 PF00175 Oxidoreductase NAD-binding domain YSA_RS08735 PF00970 Oxidoreductase FAD-binding domain YSA_RS08740 PF03472 Autoinducer binding domain YSA_RS08740 PF00196 Bacterial regulatory proteins, luxR family YSA_RS08745 PF05175 Methyltransferase small domain YSA_RS08755 PF02322 Cytochrome bd terminal oxidase subunit II YSA_RS08760 PF01654 Cytochrome bd terminal oxidase subunit I YSA_RS08770 PF00860 Permease family YSA_RS08775 PF05958 tRNA (Uracil-5-)-methyltransferase YSA_RS08780 PF00775 Dioxygenase YSA_RS08785 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal YSA_RS08785 PF00775 Dioxygenase YSA_RS08790 PF04228 Putative neutral zinc metallopeptidase YSA_RS08795 PF16591 Helical bimodular sensor domain YSA_RS08795 PF00672 HAMP domain YSA_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08805 PF03466 LysR substrate binding domain YSA_RS08815 PF02525 Flavodoxin-like fold YSA_RS08830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08830 PF03466 LysR substrate binding domain YSA_RS08835 PF02583 Metal-sensitive transcriptional repressor YSA_RS08850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YSA_RS08850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YSA_RS08855 PF00171 Aldehyde dehydrogenase family YSA_RS08860 PF03466 LysR substrate binding domain YSA_RS08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS08865 PF00691 OmpA family YSA_RS08865 PF05736 OprF membrane domain YSA_RS08870 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS08870 PF17152 Periplasmic sensor domain YSA_RS08880 PF13538 UvrD-like helicase C-terminal domain YSA_RS08885 PF00580 UvrD/REP helicase N-terminal domain YSA_RS08885 PF13361 UvrD-like helicase C-terminal domain YSA_RS08885 PF12705 PD-(D/E)XK nuclease superfamily YSA_RS08890 PF17946 RecC C-terminal domain YSA_RS08920 PF01794 Ferric reductase like transmembrane component YSA_RS08925 PF00174 Oxidoreductase molybdopterin binding domain YSA_RS08930 PF01066 CDP-alcohol phosphatidyltransferase YSA_RS08935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YSA_RS08935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YSA_RS08940 PF10369 Small subunit of acetolactate synthase YSA_RS08945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS08945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS08945 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS08950 PF04287 tRNA pseudouridine synthase C YSA_RS08960 PF00912 Transglycosylase YSA_RS08960 PF14814 Bifunctional transglycosylase second domain YSA_RS08960 PF00905 Penicillin binding protein transpeptidase domain YSA_RS08980 PF00005 ABC transporter YSA_RS08985 PF01032 FecCD transport family YSA_RS08990 PF01497 Periplasmic binding protein YSA_RS09000 PF03749 Sugar fermentation stimulation protein RE domain YSA_RS09000 PF17746 SfsA N-terminal OB domain YSA_RS09005 PF00155 Aminotransferase class I and II YSA_RS09010 PF01258 Prokaryotic dksA/traR C4-type zinc finger YSA_RS09015 PF00749 tRNA synthetases class I (E and Q), catalytic domain YSA_RS09025 PF00989 PAS fold YSA_RS09025 PF08447 PAS fold YSA_RS09025 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS09030 PF00072 Response regulator receiver domain YSA_RS09030 PF00158 Sigma-54 interaction domain YSA_RS09030 PF02954 Bacterial regulatory protein, Fis family YSA_RS09035 PF01743 Poly A polymerase head domain YSA_RS09035 PF12627 Probable RNA and SrmB- binding site of polymerase A YSA_RS09035 PF12626 Polymerase A arginine-rich C-terminus YSA_RS09040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YSA_RS09045 PF02548 Ketopantoate hydroxymethyltransferase YSA_RS09050 PF02569 Pantoate-beta-alanine ligase YSA_RS09055 PF00342 Phosphoglucose isomerase YSA_RS09065 PF13193 AMP-binding enzyme C-terminal domain YSA_RS09065 PF00501 AMP-binding enzyme YSA_RS09065 PF16177 Acetyl-coenzyme A synthetase N-terminus YSA_RS09090 PF04972 BON domain YSA_RS09095 PF00013 KH domain YSA_RS09095 PF03725 3' exoribonuclease family, domain 2 YSA_RS09095 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YSA_RS09095 PF00575 S1 RNA binding domain YSA_RS09095 PF01138 3' exoribonuclease family, domain 1 YSA_RS09105 PF00312 Ribosomal protein S15 YSA_RS09110 PF16198 tRNA pseudouridylate synthase B C-terminal domain YSA_RS09110 PF09157 Pseudouridine synthase II TruB, C-terminal YSA_RS09110 PF01509 TruB family pseudouridylate synthase (N terminal domain) YSA_RS09115 PF02033 Ribosome-binding factor A YSA_RS09120 PF08364 Bacterial translation initiation factor IF-2 associated region YSA_RS09120 PF04760 Translation initiation factor IF-2, N-terminal region YSA_RS09120 PF00009 Elongation factor Tu GTP binding domain YSA_RS09120 PF11987 Translation-initiation factor 2 YSA_RS09125 PF08529 NusA N-terminal domain YSA_RS09125 PF13184 NusA-like KH domain YSA_RS09125 PF00575 S1 RNA binding domain YSA_RS09130 PF02576 RimP N-terminal domain YSA_RS09130 PF17384 RimP C-terminal SH3 domain YSA_RS09145 PF03840 Preprotein translocase SecG subunit YSA_RS09150 PF00121 Triosephosphate isomerase YSA_RS09155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YSA_RS09155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YSA_RS09155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YSA_RS09155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YSA_RS09160 PF00809 Pterin binding enzyme YSA_RS09165 PF01434 Peptidase family M41 YSA_RS09165 PF06480 FtsH Extracellular YSA_RS09165 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS09165 PF17862 AAA+ lid domain YSA_RS09170 PF01728 FtsJ-like methyltransferase YSA_RS09175 PF01985 CRS1 / YhbY (CRM) domain YSA_RS09185 PF03449 Transcription elongation factor, N-terminal YSA_RS09185 PF01272 Transcription elongation factor, GreA/GreB, C-term YSA_RS09190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YSA_RS09190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YSA_RS09190 PF02142 MGS-like domain YSA_RS09195 PF00117 Glutamine amidotransferase class-I YSA_RS09195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YSA_RS09200 PF01113 Dihydrodipicolinate reductase, N-terminus YSA_RS09200 PF05173 Dihydrodipicolinate reductase, C-terminus YSA_RS09205 PF01556 DnaJ C terminal domain YSA_RS09205 PF00226 DnaJ domain YSA_RS09205 PF00684 DnaJ central domain YSA_RS09210 PF00012 Hsp70 protein YSA_RS09215 PF01025 GrpE YSA_RS09220 PF02463 RecF/RecN/SMC N terminal domain YSA_RS09225 PF01475 Ferric uptake regulator family YSA_RS09230 PF04355 SmpA / OmlA family YSA_RS09235 PF03364 Polyketide cyclase / dehydrase and lipid transport YSA_RS09240 PF01668 SmpB protein YSA_RS09245 PF00392 Bacterial regulatory proteins, gntR family YSA_RS09245 PF07729 FCD domain YSA_RS09250 PF02652 L-lactate permease YSA_RS09255 PF01070 FMN-dependent dehydrogenase YSA_RS09275 PF13356 Arm DNA-binding domain YSA_RS09275 PF00589 Phage integrase family YSA_RS09280 PF04851 Type III restriction enzyme, res subunit YSA_RS09280 PF08463 EcoEI R protein C-terminal YSA_RS09280 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) YSA_RS09280 PF00271 Helicase conserved C-terminal domain YSA_RS09300 PF02796 Helix-turn-helix domain of resolvase YSA_RS09300 PF00239 Resolvase, N terminal domain YSA_RS09310 PF09278 MerR, DNA binding YSA_RS09310 PF00376 MerR family regulatory protein YSA_RS09315 PF02411 MerT mercuric transport protein YSA_RS09320 PF00403 Heavy-metal-associated domain YSA_RS09330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS09330 PF00403 Heavy-metal-associated domain YSA_RS09335 PF13411 MerR HTH family regulatory protein YSA_RS09340 PF05052 MerE protein YSA_RS09345 PF00239 Resolvase, N terminal domain YSA_RS09345 PF02796 Helix-turn-helix domain of resolvase YSA_RS09355 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS09360 PF01037 Lrp/AsnC ligand binding domain YSA_RS09365 PF01810 LysE type translocator YSA_RS09370 PF01609 Transposase DDE domain YSA_RS09370 PF05598 Transposase domain (DUF772) YSA_RS09380 PF02796 Helix-turn-helix domain of resolvase YSA_RS09380 PF00239 Resolvase, N terminal domain YSA_RS09435 PF00563 EAL domain YSA_RS09435 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS09435 PF03707 Bacterial signalling protein N terminal repeat YSA_RS09440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS09440 PF08447 PAS fold YSA_RS09450 PF13356 Arm DNA-binding domain YSA_RS09450 PF00589 Phage integrase family YSA_RS09460 PF13148 Protein of unknown function (DUF3987) YSA_RS09485 PF01420 Type I restriction modification DNA specificity domain YSA_RS09490 PF02384 N-6 DNA Methylase YSA_RS09490 PF12161 HsdM N-terminal domain YSA_RS09500 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) YSA_RS09500 PF04851 Type III restriction enzyme, res subunit YSA_RS09500 PF00271 Helicase conserved C-terminal domain YSA_RS09500 PF08463 EcoEI R protein C-terminal YSA_RS09505 PF12419 SNF2 Helicase protein YSA_RS09505 PF00271 Helicase conserved C-terminal domain YSA_RS09505 PF00176 SNF2 family N-terminal domain YSA_RS09530 PF12102 Domain of unknown function (DUF3578) YSA_RS09530 PF07728 AAA domain (dynein-related subfamily) YSA_RS09555 PF07715 TonB-dependent Receptor Plug Domain YSA_RS09555 PF00593 TonB dependent receptor YSA_RS09580 PF00324 Amino acid permease YSA_RS09585 PF07690 Major Facilitator Superfamily YSA_RS09590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS09590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS09595 PF03466 LysR substrate binding domain YSA_RS09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS09605 PF13378 Enolase C-terminal domain-like YSA_RS09605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YSA_RS09610 PF07690 Major Facilitator Superfamily YSA_RS09615 PF07729 FCD domain YSA_RS09615 PF00392 Bacterial regulatory proteins, gntR family YSA_RS09620 PF00698 Acyl transferase domain YSA_RS09620 PF14765 Polyketide synthase dehydratase YSA_RS09620 PF00550 Phosphopantetheine attachment site YSA_RS09620 PF08659 KR domain YSA_RS09620 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS09620 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS09620 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS09620 PF16197 Ketoacyl-synthetase C-terminal extension YSA_RS09625 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS09635 PF13302 Acetyltransferase (GNAT) domain YSA_RS09640 PF00300 Histidine phosphatase superfamily (branch 1) YSA_RS09645 PF00850 Histone deacetylase domain YSA_RS09655 PF00271 Helicase conserved C-terminal domain YSA_RS09655 PF00270 DEAD/DEAH box helicase YSA_RS09660 PF00892 EamA-like transporter family YSA_RS09665 PF00929 Exonuclease YSA_RS09675 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) YSA_RS09690 PF00271 Helicase conserved C-terminal domain YSA_RS09690 PF04408 Helicase associated domain (HA2) YSA_RS09690 PF08482 ATP-dependent helicase C-terminal YSA_RS09690 PF00270 DEAD/DEAH box helicase YSA_RS09700 PF01545 Cation efflux family YSA_RS09700 PF16916 Dimerisation domain of Zinc Transporter YSA_RS09710 PF01037 Lrp/AsnC ligand binding domain YSA_RS09710 PF13404 AsnC-type helix-turn-helix domain YSA_RS09725 PF00849 RNA pseudouridylate synthase YSA_RS09730 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus YSA_RS09730 PF01048 Phosphorylase superfamily YSA_RS09735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS09735 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS09735 PF18158 Adaptive response protein AidB N-terminal domain YSA_RS09740 PF00672 HAMP domain YSA_RS09740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS09740 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS09740 PF01627 Hpt domain YSA_RS09740 PF00072 Response regulator receiver domain YSA_RS09745 PF08543 Phosphomethylpyrimidine kinase YSA_RS09750 PF02581 Thiamine monophosphate synthase YSA_RS09755 PF00202 Aminotransferase class-III YSA_RS09770 PF02562 PhoH-like protein YSA_RS09775 PF02130 Uncharacterized protein family UPF0054 YSA_RS09780 PF03471 Transporter associated domain YSA_RS09780 PF00571 CBS domain YSA_RS09785 PF00795 Carbon-nitrogen hydrolase YSA_RS09805 PF13603 Leucyl-tRNA synthetase, Domain 2 YSA_RS09805 PF08264 Anticodon-binding domain of tRNA YSA_RS09805 PF09334 tRNA synthetases class I (M) YSA_RS09805 PF00133 tRNA synthetases class I (I, L, M and V) YSA_RS09825 PF13406 Transglycosylase SLT domain YSA_RS09830 PF17676 LD-carboxypeptidase C-terminal domain YSA_RS09830 PF02016 LD-carboxypeptidase N-terminal domain YSA_RS09835 PF04055 Radical SAM superfamily YSA_RS09835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YSA_RS09840 PF03099 Biotin/lipoate A/B protein ligase family YSA_RS09845 PF04359 Protein of unknown function (DUF493) YSA_RS09850 PF00768 D-alanyl-D-alanine carboxypeptidase YSA_RS09850 PF07943 Penicillin-binding protein 5, C-terminal domain YSA_RS09855 PF03330 Lytic transglycolase YSA_RS09855 PF05036 Sporulation related domain YSA_RS09860 PF13406 Transglycosylase SLT domain YSA_RS09865 PF01098 Cell cycle protein YSA_RS09870 PF00905 Penicillin binding protein transpeptidase domain YSA_RS09870 PF03717 Penicillin-binding Protein dimerisation domain YSA_RS09875 PF02590 Predicted SPOUT methyltransferase YSA_RS09885 PF01467 Cytidylyltransferase-like YSA_RS09890 PF00171 Aldehyde dehydrogenase family YSA_RS09900 PF02245 Methylpurine-DNA glycosylase (MPG) YSA_RS09905 PF09335 SNARE associated Golgi protein YSA_RS09915 PF04172 LrgB-like family YSA_RS09925 PF01575 MaoC like domain YSA_RS09940 PF01207 Dihydrouridine synthase (Dus) YSA_RS09945 PF02954 Bacterial regulatory protein, Fis family YSA_RS09950 PF02142 MGS-like domain YSA_RS09950 PF01808 AICARFT/IMPCHase bienzyme YSA_RS09955 PF02843 Phosphoribosylglycinamide synthetase, C domain YSA_RS09955 PF02844 Phosphoribosylglycinamide synthetase, N domain YSA_RS09955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YSA_RS09960 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS09960 PF01627 Hpt domain YSA_RS09960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS09960 PF00672 HAMP domain YSA_RS09960 PF00072 Response regulator receiver domain YSA_RS09960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS09965 PF01914 MarC family integral membrane protein YSA_RS09985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS09990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS09995 PF02570 Precorrin-8X methylmutase YSA_RS10000 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YSA_RS10000 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YSA_RS10005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS10010 PF01888 CbiD YSA_RS10015 PF02571 Precorrin-6x reductase CbiJ/CobK YSA_RS10025 PF16200 C-terminal region of band_7 YSA_RS10025 PF01145 SPFH domain / Band 7 family YSA_RS10045 PF00593 TonB dependent receptor YSA_RS10045 PF07715 TonB-dependent Receptor Plug Domain YSA_RS10055 PF00324 Amino acid permease YSA_RS10060 PF13188 PAS domain YSA_RS10060 PF02954 Bacterial regulatory protein, Fis family YSA_RS10060 PF00158 Sigma-54 interaction domain YSA_RS10065 PF02653 Branched-chain amino acid transport system / permease component YSA_RS10075 PF00005 ABC transporter YSA_RS10075 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS10080 PF00005 ABC transporter YSA_RS10095 PF00226 DnaJ domain YSA_RS10095 PF01556 DnaJ C terminal domain YSA_RS10100 PF00012 Hsp70 protein YSA_RS10110 PF07769 psiF repeat YSA_RS10120 PF00892 EamA-like transporter family YSA_RS10140 PF05170 AsmA family YSA_RS10155 PF00440 Bacterial regulatory proteins, tetR family YSA_RS10170 PF00106 short chain dehydrogenase YSA_RS10175 PF00005 ABC transporter YSA_RS10180 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS10180 PF00005 ABC transporter YSA_RS10185 PF02653 Branched-chain amino acid transport system / permease component YSA_RS10185 PF11862 Domain of unknown function (DUF3382) YSA_RS10190 PF02653 Branched-chain amino acid transport system / permease component YSA_RS10195 PF13458 Periplasmic binding protein YSA_RS10200 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YSA_RS10200 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YSA_RS10205 PF02540 NAD synthase YSA_RS10210 PF00127 Copper binding proteins, plastocyanin/azurin family YSA_RS10215 PF03641 Possible lysine decarboxylase YSA_RS10220 PF11842 Domain of unknown function (DUF3362) YSA_RS10220 PF08497 Radical SAM N-terminal YSA_RS10220 PF04055 Radical SAM superfamily YSA_RS10225 PF00772 DnaB-like helicase N terminal domain YSA_RS10225 PF03796 DnaB-like helicase C terminal domain YSA_RS10230 PF01281 Ribosomal protein L9, N-terminal domain YSA_RS10230 PF03948 Ribosomal protein L9, C-terminal domain YSA_RS10240 PF01084 Ribosomal protein S18 YSA_RS10245 PF01250 Ribosomal protein S6 YSA_RS10250 PF08032 RNA 2'-O ribose methyltransferase substrate binding YSA_RS10250 PF00588 SpoU rRNA Methylase family YSA_RS10255 PF00575 S1 RNA binding domain YSA_RS10255 PF08461 Ribonuclease R winged-helix domain YSA_RS10255 PF00773 RNB domain YSA_RS10255 PF17876 Cold shock domain YSA_RS10255 PF08206 Ribonuclease B OB domain YSA_RS10270 PF01547 Bacterial extracellular solute-binding protein YSA_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS10285 PF02743 Cache domain YSA_RS10285 PF00672 HAMP domain YSA_RS10285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS10290 PF00709 Adenylosuccinate synthetase YSA_RS10295 PF13393 Histidyl-tRNA synthetase YSA_RS10300 PF01145 SPFH domain / Band 7 family YSA_RS10305 PF01145 SPFH domain / Band 7 family YSA_RS10310 PF01926 50S ribosome-binding GTPase YSA_RS10310 PF16360 GTP-binding GTPase Middle Region YSA_RS10310 PF13167 GTP-binding GTPase N-terminal YSA_RS10315 PF17209 Hfq protein YSA_RS10325 PF01119 DNA mismatch repair protein, C-terminal domain YSA_RS10325 PF08676 MutL C terminal dimerisation domain YSA_RS10330 PF11741 AMIN domain YSA_RS10330 PF01520 N-acetylmuramoyl-L-alanine amidase YSA_RS10335 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YSA_RS10340 PF03853 YjeF-related protein N-terminus YSA_RS10340 PF01256 Carbohydrate kinase YSA_RS10345 PF08331 Domain of unknown function (DUF1730) YSA_RS10350 PF03458 UPF0126 domain YSA_RS10355 PF00929 Exonuclease YSA_RS10360 PF03193 RsgA GTPase YSA_RS10365 PF00691 OmpA family YSA_RS10365 PF13677 Membrane MotB of proton-channel complex MotA/MotB YSA_RS10370 PF01618 MotA/TolQ/ExbB proton channel family YSA_RS10380 PF00581 Rhodanese-like domain YSA_RS10385 PF02666 Phosphatidylserine decarboxylase YSA_RS10410 PF00521 DNA gyrase/topoisomerase IV, subunit A YSA_RS10410 PF03989 DNA gyrase C-terminal domain, beta-propeller YSA_RS10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS10425 PF00986 DNA gyrase B subunit, carboxyl terminus YSA_RS10425 PF01751 Toprim domain YSA_RS10425 PF00204 DNA gyrase B YSA_RS10430 PF05728 Uncharacterised protein family (UPF0227) YSA_RS10435 PF00149 Calcineurin-like phosphoesterase YSA_RS10445 PF00293 NUDIX domain YSA_RS10460 PF13667 ThiC-associated domain YSA_RS10460 PF01964 Radical SAM ThiC family YSA_RS10465 PF02321 Outer membrane efflux protein YSA_RS10470 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YSA_RS10475 PF03466 LysR substrate binding domain YSA_RS10475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS10480 PF00893 Small Multidrug Resistance protein YSA_RS10485 PF01266 FAD dependent oxidoreductase YSA_RS10490 PF00248 Aldo/keto reductase family YSA_RS10500 PF01467 Cytidylyltransferase-like YSA_RS10500 PF00294 pfkB family carbohydrate kinase YSA_RS10505 PF00664 ABC transporter transmembrane region YSA_RS10505 PF00005 ABC transporter YSA_RS10520 PF13439 Glycosyltransferase Family 4 YSA_RS10520 PF00534 Glycosyl transferases group 1 YSA_RS10545 PF13439 Glycosyltransferase Family 4 YSA_RS10550 PF16861 Carbamoyltransferase C-terminus YSA_RS10550 PF02543 Carbamoyltransferase N-terminus YSA_RS10555 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YSA_RS10560 PF00474 Sodium:solute symporter family YSA_RS10565 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YSA_RS10565 PF01619 Proline dehydrogenase YSA_RS10565 PF14850 DNA-binding domain of Proline dehydrogenase YSA_RS10565 PF00171 Aldehyde dehydrogenase family YSA_RS10580 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS10580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS10580 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS10580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS10590 PF01523 Putative modulator of DNA gyrase YSA_RS10595 PF07690 Major Facilitator Superfamily YSA_RS10600 PF00270 DEAD/DEAH box helicase YSA_RS10600 PF00271 Helicase conserved C-terminal domain YSA_RS10600 PF03880 DbpA RNA binding domain YSA_RS10610 PF12805 FUSC-like inner membrane protein yccS YSA_RS10615 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS10620 PF13673 Acetyltransferase (GNAT) domain YSA_RS10630 PF01863 Protein of unknown function DUF45 YSA_RS10635 PF00563 EAL domain YSA_RS10635 PF03707 Bacterial signalling protein N terminal repeat YSA_RS10635 PF13188 PAS domain YSA_RS10635 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS10640 PF01116 Fructose-bisphosphate aldolase class-II YSA_RS10655 PF00162 Phosphoglycerate kinase YSA_RS10660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YSA_RS10660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YSA_RS10665 PF00456 Transketolase, thiamine diphosphate binding domain YSA_RS10665 PF02780 Transketolase, C-terminal domain YSA_RS10665 PF02779 Transketolase, pyrimidine binding domain YSA_RS10670 PF01022 Bacterial regulatory protein, arsR family YSA_RS10675 PF02773 S-adenosylmethionine synthetase, C-terminal domain YSA_RS10675 PF00438 S-adenosylmethionine synthetase, N-terminal domain YSA_RS10675 PF02772 S-adenosylmethionine synthetase, central domain YSA_RS10680 PF03120 NAD-dependent DNA ligase OB-fold domain YSA_RS10680 PF01653 NAD-dependent DNA ligase adenylation domain YSA_RS10710 PF00999 Sodium/hydrogen exchanger family YSA_RS10725 PF05221 S-adenosyl-L-homocysteine hydrolase YSA_RS10725 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YSA_RS10730 PF02219 Methylenetetrahydrofolate reductase YSA_RS10750 PF00270 DEAD/DEAH box helicase YSA_RS10750 PF00271 Helicase conserved C-terminal domain YSA_RS10755 PF04264 YceI-like domain YSA_RS10760 PF01292 Prokaryotic cytochrome b561 YSA_RS10765 PF01593 Flavin containing amine oxidoreductase YSA_RS10775 PF00202 Aminotransferase class-III YSA_RS10780 PF04452 RNA methyltransferase YSA_RS10785 PF03006 Haemolysin-III related YSA_RS10795 PF01584 CheW-like domain YSA_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS10795 PF01627 Hpt domain YSA_RS10795 PF00072 Response regulator receiver domain YSA_RS10795 PF02895 Signal transducing histidine kinase, homodimeric domain YSA_RS10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS10800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YSA_RS10805 PF01584 CheW-like domain YSA_RS10810 PF00072 Response regulator receiver domain YSA_RS10815 PF00072 Response regulator receiver domain YSA_RS10820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YSA_RS10820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YSA_RS10830 PF02622 Uncharacterized ACR, COG1678 YSA_RS10835 PF03652 Holliday junction resolvase YSA_RS10840 PF00156 Phosphoribosyl transferase domain YSA_RS10845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YSA_RS10845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YSA_RS10850 PF01979 Amidohydrolase family YSA_RS10855 PF00227 Proteasome subunit YSA_RS10860 PF07724 AAA domain (Cdc48 subfamily) YSA_RS10860 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS10870 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus YSA_RS10875 PF00561 alpha/beta hydrolase fold YSA_RS10880 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus YSA_RS10910 PF01209 ubiE/COQ5 methyltransferase family YSA_RS10920 PF03109 ABC1 family YSA_RS10925 PF01502 Phosphoribosyl-AMP cyclohydrolase YSA_RS10930 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YSA_RS10935 PF02416 mttA/Hcf106 family YSA_RS10940 PF02416 mttA/Hcf106 family YSA_RS10945 PF00902 Sec-independent protein translocase protein (TatC) YSA_RS10955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS10955 PF16591 Helical bimodular sensor domain YSA_RS10955 PF00672 HAMP domain YSA_RS10960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS10960 PF00672 HAMP domain YSA_RS10960 PF16591 Helical bimodular sensor domain YSA_RS10965 PF00005 ABC transporter YSA_RS10970 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS10975 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS10980 PF00535 Glycosyl transferase family 2 YSA_RS10985 PF04349 Periplasmic glucan biosynthesis protein, MdoG YSA_RS10990 PF02580 D-Tyr-tRNA(Tyr) deacylase YSA_RS10995 PF00561 alpha/beta hydrolase fold YSA_RS11005 PF01979 Amidohydrolase family YSA_RS11010 PF00324 Amino acid permease YSA_RS11015 PF00221 Aromatic amino acid lyase YSA_RS11020 PF17392 Urocanase C-terminal domain YSA_RS11020 PF17391 Urocanase N-terminal domain YSA_RS11020 PF01175 Urocanase Rossmann-like domain YSA_RS11025 PF05962 HutD YSA_RS11030 PF07702 UTRA domain YSA_RS11030 PF00392 Bacterial regulatory proteins, gntR family YSA_RS11035 PF01979 Amidohydrolase family YSA_RS11040 PF08212 Lipocalin-like domain YSA_RS11050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 YSA_RS11050 PF01610 Transposase YSA_RS11050 PF13542 Helix-turn-helix domain of transposase family ISL3 YSA_RS11060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YSA_RS11065 PF00343 Carbohydrate phosphorylase YSA_RS11080 PF00009 Elongation factor Tu GTP binding domain YSA_RS11080 PF03144 Elongation factor Tu domain 2 YSA_RS11080 PF00679 Elongation factor G C-terminus YSA_RS11085 PF02926 THUMP domain YSA_RS11085 PF02568 Thiamine biosynthesis protein (ThiI) YSA_RS11090 PF00120 Glutamine synthetase, catalytic domain YSA_RS11090 PF03951 Glutamine synthetase, beta-Grasp domain YSA_RS11100 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS11100 PF00989 PAS fold YSA_RS11100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS11105 PF00072 Response regulator receiver domain YSA_RS11105 PF02954 Bacterial regulatory protein, Fis family YSA_RS11105 PF00158 Sigma-54 interaction domain YSA_RS11115 PF00588 SpoU rRNA Methylase family YSA_RS11120 PF02556 Preprotein translocase subunit SecB YSA_RS11125 PF00462 Glutaredoxin YSA_RS11130 PF00581 Rhodanese-like domain YSA_RS11135 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YSA_RS11135 PF01676 Metalloenzyme superfamily YSA_RS11140 PF01551 Peptidase family M23 YSA_RS11145 PF13180 PDZ domain YSA_RS11145 PF03572 Peptidase family S41 YSA_RS11150 PF04748 Divergent polysaccharide deacetylase YSA_RS11160 PF02028 BCCT, betaine/carnitine/choline family transporter YSA_RS11165 PF00440 Bacterial regulatory proteins, tetR family YSA_RS11165 PF13977 BetI-type transcriptional repressor, C-terminal YSA_RS11170 PF00171 Aldehyde dehydrogenase family YSA_RS11175 PF00732 GMC oxidoreductase YSA_RS11175 PF05199 GMC oxidoreductase YSA_RS11185 PF02080 TrkA-C domain YSA_RS11185 PF00999 Sodium/hydrogen exchanger family YSA_RS11185 PF03471 Transporter associated domain YSA_RS11190 PF12794 Mechanosensitive ion channel inner membrane domain 1 YSA_RS11190 PF12795 Mechanosensitive ion channel porin domain YSA_RS11190 PF00924 Mechanosensitive ion channel YSA_RS11195 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YSA_RS11205 PF00085 Thioredoxin YSA_RS11210 PF13614 AAA domain YSA_RS11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS11215 PF03466 LysR substrate binding domain YSA_RS11220 PF07690 Major Facilitator Superfamily YSA_RS11240 PF03934 Type II secretion system (T2SS), protein K YSA_RS11245 PF11612 Type II secretion system (T2SS), protein J YSA_RS11245 PF07963 Prokaryotic N-terminal methylation motif YSA_RS11250 PF02501 Type II secretion system (T2SS), protein I YSA_RS11250 PF07963 Prokaryotic N-terminal methylation motif YSA_RS11255 PF07963 Prokaryotic N-terminal methylation motif YSA_RS11255 PF12019 Type II transport protein GspH YSA_RS11260 PF07963 Prokaryotic N-terminal methylation motif YSA_RS11260 PF08334 Type II secretion system (T2SS), protein G YSA_RS11265 PF00482 Type II secretion system (T2SS), protein F YSA_RS11270 PF00437 Type II/IV secretion system protein YSA_RS11275 PF03958 Bacterial type II/III secretion system short domain YSA_RS11275 PF00263 Bacterial type II and III secretion system protein YSA_RS11290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YSA_RS11290 PF18416 N-acetylglucosamine binding protein domain 2 YSA_RS11295 PF01208 Uroporphyrinogen decarboxylase (URO-D) YSA_RS11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS11300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YSA_RS11305 PF01493 GXGXG motif YSA_RS11305 PF01645 Conserved region in glutamate synthase YSA_RS11305 PF00310 Glutamine amidotransferases class-II YSA_RS11305 PF04898 Glutamate synthase central domain YSA_RS11315 PF01761 3-dehydroquinate synthase YSA_RS11320 PF01202 Shikimate kinase YSA_RS11325 PF03958 Bacterial type II/III secretion system short domain YSA_RS11325 PF07660 Secretin and TonB N terminus short domain YSA_RS11325 PF00263 Bacterial type II and III secretion system protein YSA_RS11325 PF11741 AMIN domain YSA_RS11340 PF11104 Type IV pilus assembly protein PilM; YSA_RS11345 PF00905 Penicillin binding protein transpeptidase domain YSA_RS11345 PF17092 Penicillin-binding protein OB-like domain YSA_RS11345 PF00912 Transglycosylase YSA_RS11350 PF00390 Malic enzyme, N-terminal domain YSA_RS11350 PF03949 Malic enzyme, NAD binding domain YSA_RS11360 PF01197 Ribosomal protein L31 YSA_RS11365 PF18074 Primosomal protein N C-terminal domain YSA_RS11365 PF17764 3′ DNA-binding domain (3′BD) YSA_RS11365 PF00270 DEAD/DEAH box helicase YSA_RS11365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YSA_RS11365 PF00271 Helicase conserved C-terminal domain YSA_RS11370 PF03485 Arginyl tRNA synthetase N terminal domain YSA_RS11370 PF00750 tRNA synthetases class I (R) YSA_RS11370 PF05746 DALR anticodon binding domain YSA_RS11385 PF00877 NlpC/P60 family YSA_RS11395 PF00437 Type II/IV secretion system protein YSA_RS11400 PF01168 Alanine racemase, N-terminal domain YSA_RS11405 PF14748 Pyrroline-5-carboxylate reductase dimerisation YSA_RS11405 PF03807 NADP oxidoreductase coenzyme F420-dependent YSA_RS11410 PF02325 YGGT family YSA_RS11415 PF00561 alpha/beta hydrolase fold YSA_RS11420 PF07021 Methionine biosynthesis protein MetW YSA_RS11420 PF00561 alpha/beta hydrolase fold YSA_RS11430 PF01725 Ham1 family YSA_RS11435 PF06969 HemN C-terminal domain YSA_RS11435 PF04055 Radical SAM superfamily YSA_RS11445 PF02390 Putative methyltransferase YSA_RS11450 PF05690 Thiazole biosynthesis protein ThiG YSA_RS11455 PF02597 ThiS family YSA_RS11455 PF05690 Thiazole biosynthesis protein ThiG YSA_RS11460 PF04241 Protein of unknown function (DUF423) YSA_RS11465 PF00912 Transglycosylase YSA_RS11470 PF00140 Sigma-70 factor, region 1.2 YSA_RS11470 PF04545 Sigma-70, region 4 YSA_RS11470 PF04542 Sigma-70 region 2 YSA_RS11475 PF18075 FtsX extracellular domain YSA_RS11480 PF00005 ABC transporter YSA_RS11485 PF00448 SRP54-type protein, GTPase domain YSA_RS11485 PF02881 SRP54-type protein, helical bundle domain YSA_RS11495 PF05193 Peptidase M16 inactive domain YSA_RS11495 PF00675 Insulinase (Peptidase family M16) YSA_RS11500 PF05193 Peptidase M16 inactive domain YSA_RS11515 PF05193 Peptidase M16 inactive domain YSA_RS11525 PF00581 Rhodanese-like domain YSA_RS11535 PF00171 Aldehyde dehydrogenase family YSA_RS11545 PF05199 GMC oxidoreductase YSA_RS11545 PF00732 GMC oxidoreductase YSA_RS11550 PF01467 Cytidylyltransferase-like YSA_RS11555 PF00037 4Fe-4S binding domain YSA_RS11565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YSA_RS11565 PF06827 Zinc finger found in FPG and IleRS YSA_RS11565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YSA_RS11575 PF10672 S-adenosylmethionine-dependent methyltransferase YSA_RS11575 PF17785 PUA-like domain YSA_RS11580 PF00920 Dehydratase family YSA_RS11605 PF00375 Sodium:dicarboxylate symporter family YSA_RS11610 PF00186 Dihydrofolate reductase YSA_RS11620 PF12631 MnmE helical domain YSA_RS11620 PF10396 GTP-binding protein TrmE N-terminus YSA_RS11620 PF01926 50S ribosome-binding GTPase YSA_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11635 PF08402 TOBE domain YSA_RS11635 PF00005 ABC transporter YSA_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS11645 PF03466 LysR substrate binding domain YSA_RS11650 PF00403 Heavy-metal-associated domain YSA_RS11655 PF13411 MerR HTH family regulatory protein YSA_RS11660 PF00303 Thymidylate synthase YSA_RS11665 PF01790 Prolipoprotein diacylglyceryl transferase YSA_RS11670 PF01925 Sulfite exporter TauE/SafE YSA_RS11680 PF02896 PEP-utilising enzyme, TIM barrel domain YSA_RS11680 PF00391 PEP-utilising enzyme, mobile domain YSA_RS11680 PF05524 PEP-utilising enzyme, N-terminal YSA_RS11680 PF01590 GAF domain YSA_RS11685 PF00293 NUDIX domain YSA_RS11700 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS11700 PF00585 C-terminal regulatory domain of Threonine dehydratase YSA_RS11705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YSA_RS11710 PF06977 SdiA-regulated YSA_RS11715 PF06977 SdiA-regulated YSA_RS11725 PF01557 Fumarylacetoacetate (FAA) hydrolase family YSA_RS11730 PF01565 FAD binding domain YSA_RS11730 PF02913 FAD linked oxidases, C-terminal domain YSA_RS11735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS11735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS11775 PF12464 Maltose acetyltransferase YSA_RS11775 PF14602 Hexapeptide repeat of succinyl-transferase YSA_RS11780 PF01804 Penicillin amidase YSA_RS11785 PF03180 NLPA lipoprotein YSA_RS11790 PF00158 Sigma-54 interaction domain YSA_RS11800 PF00005 ABC transporter YSA_RS11800 PF12857 TOBE-like domain YSA_RS11805 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11830 PF00873 AcrB/AcrD/AcrF family YSA_RS11835 PF13533 Biotin-lipoyl like YSA_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11860 PF08402 TOBE domain YSA_RS11860 PF00005 ABC transporter YSA_RS11865 PF13416 Bacterial extracellular solute-binding protein YSA_RS11870 PF13416 Bacterial extracellular solute-binding protein YSA_RS11875 PF00202 Aminotransferase class-III YSA_RS11880 PF00120 Glutamine synthetase, catalytic domain YSA_RS11890 PF00120 Glutamine synthetase, catalytic domain YSA_RS11895 PF00696 Amino acid kinase family YSA_RS11895 PF00583 Acetyltransferase (GNAT) family YSA_RS11900 PF07687 Peptidase dimerisation domain YSA_RS11900 PF01546 Peptidase family M20/M25/M40 YSA_RS11910 PF01037 Lrp/AsnC ligand binding domain YSA_RS11910 PF13404 AsnC-type helix-turn-helix domain YSA_RS11920 PF00437 Type II/IV secretion system protein YSA_RS11930 PF02347 Glycine cleavage system P-protein YSA_RS11935 PF01597 Glycine cleavage H-protein YSA_RS11940 PF01571 Aminomethyltransferase folate-binding domain YSA_RS11940 PF08669 Glycine cleavage T-protein C-terminal barrel domain YSA_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS11955 PF01494 FAD binding domain YSA_RS11965 PF01494 FAD binding domain YSA_RS11970 PF00557 Metallopeptidase family M24 YSA_RS11970 PF05195 Aminopeptidase P, N-terminal domain YSA_RS11975 PF03695 Uncharacterised protein family (UPF0149) YSA_RS11985 PF05164 Cell division protein ZapA YSA_RS11995 PF01812 5-formyltetrahydrofolate cyclo-ligase family YSA_RS12005 PF13533 Biotin-lipoyl like YSA_RS12010 PF00005 ABC transporter YSA_RS12035 PF00175 Oxidoreductase NAD-binding domain YSA_RS12040 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YSA_RS12045 PF07498 Rho termination factor, N-terminal domain YSA_RS12045 PF07497 Rho termination factor, RNA-binding domain YSA_RS12045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YSA_RS12050 PF00085 Thioredoxin YSA_RS12055 PF02541 Ppx/GppA phosphatase family YSA_RS12060 PF02503 Polyphosphate kinase middle domain YSA_RS12060 PF13090 Polyphosphate kinase C-terminal domain 2 YSA_RS12060 PF17941 Polyphosphate kinase C-terminal domain 1 YSA_RS12060 PF13089 Polyphosphate kinase N-terminal domain YSA_RS12070 PF04116 Fatty acid hydroxylase superfamily YSA_RS12080 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YSA_RS12085 PF01295 Adenylate cyclase, class-I YSA_RS12085 PF12633 Adenylate cyclase NT domain YSA_RS12090 PF01272 Transcription elongation factor, GreA/GreB, C-term YSA_RS12090 PF14760 Rnk N-terminus YSA_RS12100 PF01491 Frataxin-like domain YSA_RS12105 PF13627 Prokaryotic lipoprotein-attachment site YSA_RS12110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YSA_RS12110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YSA_RS12115 PF01678 Diaminopimelate epimerase YSA_RS12125 PF00589 Phage integrase family YSA_RS12125 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS12130 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS12145 PF00909 Ammonium Transporter Family YSA_RS12150 PF00543 Nitrogen regulatory protein P-II YSA_RS12155 PF04380 Membrane fusogenic activity YSA_RS12170 PF13335 Magnesium chelatase, subunit ChlI C-terminal YSA_RS12170 PF01078 Magnesium chelatase, subunit ChlI YSA_RS12175 PF00196 Bacterial regulatory proteins, luxR family YSA_RS12175 PF00072 Response regulator receiver domain YSA_RS12180 PF00196 Bacterial regulatory proteins, luxR family YSA_RS12180 PF00072 Response regulator receiver domain YSA_RS12185 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS12185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS12185 PF00989 PAS fold YSA_RS12185 PF08447 PAS fold YSA_RS12185 PF13493 Domain of unknown function (DUF4118) YSA_RS12185 PF13426 PAS domain YSA_RS12190 PF00857 Isochorismatase family YSA_RS12200 PF01965 DJ-1/PfpI family YSA_RS12205 PF02254 TrkA-N domain YSA_RS12205 PF00999 Sodium/hydrogen exchanger family YSA_RS12225 PF00857 Isochorismatase family YSA_RS12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12230 PF03466 LysR substrate binding domain YSA_RS12240 PF03573 outer membrane porin, OprD family YSA_RS12250 PF07969 Amidohydrolase family YSA_RS12255 PF00561 alpha/beta hydrolase fold YSA_RS12265 PF00857 Isochorismatase family YSA_RS12275 PF01266 FAD dependent oxidoreductase YSA_RS12280 PF00171 Aldehyde dehydrogenase family YSA_RS12285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12285 PF03466 LysR substrate binding domain YSA_RS12290 PF07063 Domain of unknown function (DUF1338) YSA_RS12295 PF03466 LysR substrate binding domain YSA_RS12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12300 PF01554 MatE YSA_RS12305 PF03707 Bacterial signalling protein N terminal repeat YSA_RS12305 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS12305 PF00563 EAL domain YSA_RS12310 PF00580 UvrD/REP helicase N-terminal domain YSA_RS12310 PF13361 UvrD-like helicase C-terminal domain YSA_RS12320 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YSA_RS12320 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YSA_RS12325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS12335 PF01168 Alanine racemase, N-terminal domain YSA_RS12335 PF00842 Alanine racemase, C-terminal domain YSA_RS12345 PF01266 FAD dependent oxidoreductase YSA_RS12350 PF01037 Lrp/AsnC ligand binding domain YSA_RS12360 PF01266 FAD dependent oxidoreductase YSA_RS12370 PF00392 Bacterial regulatory proteins, gntR family YSA_RS12370 PF00155 Aminotransferase class I and II YSA_RS12375 PF13091 PLD-like domain YSA_RS12385 PF00171 Aldehyde dehydrogenase family YSA_RS12400 PF00471 Ribosomal protein L33 YSA_RS12405 PF00830 Ribosomal L28 family YSA_RS12410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS12455 PF01527 Transposase YSA_RS12465 PF13005 zinc-finger binding domain of transposase IS66 YSA_RS12465 PF13007 Transposase C of IS166 homeodomain YSA_RS12465 PF13817 IS66 C-terminal element YSA_RS12465 PF03050 Transposase IS66 family YSA_RS12475 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YSA_RS12475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YSA_RS12480 PF03606 C4-dicarboxylate anaerobic carrier YSA_RS12485 PF03466 LysR substrate binding domain YSA_RS12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12490 PF03573 outer membrane porin, OprD family YSA_RS12495 PF00884 Sulfatase YSA_RS12495 PF08019 Phosphoethanolamine transferase EptA/EptB YSA_RS12505 PF01545 Cation efflux family YSA_RS12520 PF00072 Response regulator receiver domain YSA_RS12520 PF00486 Transcriptional regulatory protein, C terminal YSA_RS12525 PF00672 HAMP domain YSA_RS12525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS12525 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS12545 PF00535 Glycosyl transferase family 2 YSA_RS12560 PF07396 Phosphate-selective porin O and P YSA_RS12575 PF00403 Heavy-metal-associated domain YSA_RS12585 PF00873 AcrB/AcrD/AcrF family YSA_RS12590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS12590 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS12595 PF02321 Outer membrane efflux protein YSA_RS12600 PF03573 outer membrane porin, OprD family YSA_RS12605 PF00072 Response regulator receiver domain YSA_RS12605 PF00486 Transcriptional regulatory protein, C terminal YSA_RS12645 PF04002 RadC-like JAB domain YSA_RS12650 PF04127 DNA / pantothenate metabolism flavoprotein YSA_RS12650 PF02441 Flavoprotein YSA_RS12655 PF00692 dUTPase YSA_RS12665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YSA_RS12665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YSA_RS12665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YSA_RS12665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YSA_RS12670 PF00696 Amino acid kinase family YSA_RS12675 PF00156 Phosphoribosyl transferase domain YSA_RS12680 PF03372 Endonuclease/Exonuclease/phosphatase family YSA_RS12690 PF01138 3' exoribonuclease family, domain 1 YSA_RS12690 PF03725 3' exoribonuclease family, domain 2 YSA_RS12695 PF08340 Domain of unknown function (DUF1732) YSA_RS12695 PF03755 YicC-like family, N-terminal region YSA_RS12700 PF00625 Guanylate kinase YSA_RS12710 PF07722 Peptidase C26 YSA_RS12715 PF00120 Glutamine synthetase, catalytic domain YSA_RS12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12720 PF03466 LysR substrate binding domain YSA_RS12725 PF01192 RNA polymerase Rpb6 YSA_RS12730 PF02824 TGS domain YSA_RS12730 PF04607 Region found in RelA / SpoT proteins YSA_RS12730 PF13291 ACT domain YSA_RS12735 PF01042 Endoribonuclease L-PSP YSA_RS12755 PF01618 MotA/TolQ/ExbB proton channel family YSA_RS12760 PF02472 Biopolymer transport protein ExbD/TolR YSA_RS12765 PF03544 Gram-negative bacterial TonB protein C-terminal YSA_RS12770 PF03466 LysR substrate binding domain YSA_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12775 PF17191 RecG wedge domain YSA_RS12775 PF00271 Helicase conserved C-terminal domain YSA_RS12775 PF00270 DEAD/DEAH box helicase YSA_RS12795 PF00216 Bacterial DNA-binding protein YSA_RS12800 PF18113 Rubredoxin binding C-terminal domain YSA_RS12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS12805 PF00301 Rubredoxin YSA_RS12810 PF04345 Chorismate lyase YSA_RS12815 PF01040 UbiA prenyltransferase family YSA_RS12825 PF00072 Response regulator receiver domain YSA_RS12825 PF00486 Transcriptional regulatory protein, C terminal YSA_RS12830 PF11808 Phosphate regulon sensor protein PhoR YSA_RS12830 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS12830 PF00989 PAS fold YSA_RS12830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS12835 PF03471 Transporter associated domain YSA_RS12835 PF00571 CBS domain YSA_RS12835 PF01595 Cyclin M transmembrane N-terminal domain YSA_RS12840 PF08525 Opacity-associated protein A N-terminal motif YSA_RS12840 PF01476 LysM domain YSA_RS12840 PF01551 Peptidase family M23 YSA_RS12845 PF00072 Response regulator receiver domain YSA_RS12850 PF01895 PhoU domain YSA_RS12855 PF00005 ABC transporter YSA_RS12860 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS12865 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS12870 PF12849 PBP superfamily domain YSA_RS12875 PF07690 Major Facilitator Superfamily YSA_RS12880 PF03061 Thioesterase superfamily YSA_RS12900 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YSA_RS12900 PF02222 ATP-grasp domain YSA_RS12905 PF00731 AIR carboxylase YSA_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12915 PF03466 LysR substrate binding domain YSA_RS12920 PF10415 Fumarase C C-terminus YSA_RS12920 PF00206 Lyase YSA_RS12925 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YSA_RS12925 PF12833 Helix-turn-helix domain YSA_RS12930 PF00850 Histone deacetylase domain YSA_RS12935 PF13416 Bacterial extracellular solute-binding protein YSA_RS12940 PF00155 Aminotransferase class I and II YSA_RS12940 PF00392 Bacterial regulatory proteins, gntR family YSA_RS12960 PF00364 Biotin-requiring enzyme YSA_RS12960 PF00682 HMGL-like YSA_RS12960 PF02436 Conserved carboxylase domain YSA_RS12965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YSA_RS12965 PF00289 Biotin carboxylase, N-terminal domain YSA_RS12965 PF02785 Biotin carboxylase C-terminal domain YSA_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS12970 PF03466 LysR substrate binding domain YSA_RS12980 PF01418 Helix-turn-helix domain, rpiR family YSA_RS12980 PF01380 SIS domain YSA_RS12985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YSA_RS12985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YSA_RS12990 PF00580 UvrD/REP helicase N-terminal domain YSA_RS12990 PF13361 UvrD-like helicase C-terminal domain YSA_RS13005 PF00999 Sodium/hydrogen exchanger family YSA_RS13005 PF02254 TrkA-N domain YSA_RS13010 PF03061 Thioesterase superfamily YSA_RS13015 PF08543 Phosphomethylpyrimidine kinase YSA_RS13025 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS13025 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS13035 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS13035 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS13045 PF12276 Protein of unknown function (DUF3617) YSA_RS13050 PF13396 Phospholipase_D-nuclease N-terminal YSA_RS13050 PF13091 PLD-like domain YSA_RS13060 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS13060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS13065 PF02779 Transketolase, pyrimidine binding domain YSA_RS13065 PF02780 Transketolase, C-terminal domain YSA_RS13070 PF00456 Transketolase, thiamine diphosphate binding domain YSA_RS13075 PF07690 Major Facilitator Superfamily YSA_RS13085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS13085 PF03466 LysR substrate binding domain YSA_RS13140 PF01380 SIS domain YSA_RS13145 PF00455 DeoR C terminal sensor domain YSA_RS13145 PF08220 DeoR-like helix-turn-helix domain YSA_RS13150 PF12804 MobA-like NTP transferase domain YSA_RS13150 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS13155 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YSA_RS13155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YSA_RS13160 PF02874 ATP synthase alpha/beta family, beta-barrel domain YSA_RS13160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YSA_RS13165 PF00231 ATP synthase YSA_RS13170 PF02874 ATP synthase alpha/beta family, beta-barrel domain YSA_RS13170 PF00306 ATP synthase alpha/beta chain, C terminal domain YSA_RS13170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YSA_RS13175 PF00213 ATP synthase delta (OSCP) subunit YSA_RS13180 PF00430 ATP synthase B/B' CF(0) YSA_RS13185 PF00137 ATP synthase subunit C YSA_RS13190 PF00119 ATP synthase A chain YSA_RS13195 PF03899 ATP synthase I chain YSA_RS13200 PF02195 ParB-like nuclease domain YSA_RS13200 PF17762 HTH domain found in ParB protein YSA_RS13205 PF13614 AAA domain YSA_RS13210 PF02527 rRNA small subunit methyltransferase G YSA_RS13215 PF01134 Glucose inhibited division protein A YSA_RS13215 PF13932 GidA associated domain YSA_RS13220 PF10396 GTP-binding protein TrmE N-terminus YSA_RS13220 PF12631 MnmE helical domain YSA_RS13220 PF01926 50S ribosome-binding GTPase YSA_RS13225 PF02096 60Kd inner membrane protein YSA_RS13225 PF14849 YidC periplasmic domain YSA_RS13230 PF01809 Putative membrane protein insertion efficiency factor YSA_RS13235 PF00825 Ribonuclease P YSA_RS13240 PF00468 Ribosomal protein L34 YSA_RS13245 PF11638 DnaA N-terminal domain YSA_RS13245 PF00308 Bacterial dnaA protein YSA_RS13245 PF08299 Bacterial dnaA protein helix-turn-helix YSA_RS13250 PF02767 DNA polymerase III beta subunit, central domain YSA_RS13250 PF02768 DNA polymerase III beta subunit, C-terminal domain YSA_RS13250 PF00712 DNA polymerase III beta subunit, N-terminal domain YSA_RS13255 PF02463 RecF/RecN/SMC N terminal domain YSA_RS13260 PF00204 DNA gyrase B YSA_RS13260 PF00986 DNA gyrase B subunit, carboxyl terminus YSA_RS13260 PF18053 DNA gyrase B subunit insert domain YSA_RS13260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS13260 PF01751 Toprim domain YSA_RS13270 PF00072 Response regulator receiver domain YSA_RS13270 PF02954 Bacterial regulatory protein, Fis family YSA_RS13270 PF00158 Sigma-54 interaction domain YSA_RS13275 PF00753 Metallo-beta-lactamase superfamily YSA_RS13285 PF01925 Sulfite exporter TauE/SafE YSA_RS13295 PF00732 GMC oxidoreductase YSA_RS13295 PF05199 GMC oxidoreductase YSA_RS13300 PF08946 Osmosensory transporter coiled coil YSA_RS13300 PF00083 Sugar (and other) transporter YSA_RS13315 PF02092 Glycyl-tRNA synthetase beta subunit YSA_RS13315 PF05746 DALR anticodon binding domain YSA_RS13320 PF02091 Glycyl-tRNA synthetase alpha subunit YSA_RS13325 PF03352 Methyladenine glycosylase YSA_RS13340 PF02254 TrkA-N domain YSA_RS13340 PF02080 TrkA-C domain YSA_RS13345 PF01189 16S rRNA methyltransferase RsmB/F YSA_RS13345 PF01029 NusB family YSA_RS13350 PF00551 Formyl transferase YSA_RS13350 PF02911 Formyl transferase, C-terminal domain YSA_RS13355 PF01327 Polypeptide deformylase YSA_RS13360 PF02481 DNA recombination-mediator protein A YSA_RS13360 PF17782 DprA winged helix domain YSA_RS13365 PF01300 Telomere recombination YSA_RS13380 PF00107 Zinc-binding dehydrogenase YSA_RS13380 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS13385 PF01218 Coproporphyrinogen III oxidase YSA_RS13390 PF08501 Shikimate dehydrogenase substrate binding domain YSA_RS13390 PF01488 Shikimate / quinate 5-dehydrogenase YSA_RS13390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YSA_RS13395 PF00916 Sulfate permease family YSA_RS13395 PF01740 STAS domain YSA_RS13405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YSA_RS13410 PF12411 Choline sulfatase enzyme C terminal YSA_RS13410 PF00884 Sulfatase YSA_RS13415 PF03466 LysR substrate binding domain YSA_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS13430 PF00290 Tryptophan synthase alpha chain YSA_RS13435 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS13440 PF03466 LysR substrate binding domain YSA_RS13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS13450 PF07311 Dodecin YSA_RS13460 PF00296 Luciferase-like monooxygenase YSA_RS13465 PF02566 OsmC-like protein YSA_RS13490 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS13495 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS13500 PF01432 Peptidase family M3 YSA_RS13505 PF09526 Probable metal-binding protein (DUF2387) YSA_RS13515 PF04055 Radical SAM superfamily YSA_RS13520 PF00484 Carbonic anhydrase YSA_RS13525 PF00916 Sulfate permease family YSA_RS13525 PF01740 STAS domain YSA_RS13535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YSA_RS13535 PF02790 Cytochrome C oxidase subunit II, transmembrane domain YSA_RS13540 PF00115 Cytochrome C and Quinol oxidase polypeptide I YSA_RS13545 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 YSA_RS13550 PF00510 Cytochrome c oxidase subunit III YSA_RS13570 PF02628 Cytochrome oxidase assembly protein YSA_RS13575 PF01040 UbiA prenyltransferase family YSA_RS13580 PF02630 SCO1/SenC YSA_RS13585 PF03180 NLPA lipoprotein YSA_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS13595 PF09383 NIL domain YSA_RS13595 PF00005 ABC transporter YSA_RS13600 PF18011 C-terminal domain found in long catalases YSA_RS13600 PF06628 Catalase-related immune-responsive YSA_RS13600 PF00199 Catalase YSA_RS13610 PF00950 ABC 3 transport family YSA_RS13615 PF00005 ABC transporter YSA_RS13620 PF01475 Ferric uptake regulator family YSA_RS13625 PF01297 Zinc-uptake complex component A periplasmic YSA_RS13635 PF01636 Phosphotransferase enzyme family YSA_RS13645 PF01612 3'-5' exonuclease YSA_RS13645 PF00476 DNA polymerase family A YSA_RS13645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YSA_RS13645 PF01367 5'-3' exonuclease, C-terminal SAM fold YSA_RS13650 PF01926 50S ribosome-binding GTPase YSA_RS13655 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS13660 PF00034 Cytochrome c YSA_RS13665 PF01323 DSBA-like thioredoxin domain YSA_RS13675 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS13680 PF01510 N-acetylmuramoyl-L-alanine amidase YSA_RS13685 PF12792 CSS motif domain associated with EAL YSA_RS13685 PF00563 EAL domain YSA_RS13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS13690 PF08448 PAS fold YSA_RS13690 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB YSA_RS13690 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS13690 PF00672 HAMP domain YSA_RS13695 PF00072 Response regulator receiver domain YSA_RS13695 PF02954 Bacterial regulatory protein, Fis family YSA_RS13695 PF00158 Sigma-54 interaction domain YSA_RS13720 PF00375 Sodium:dicarboxylate symporter family YSA_RS13725 PF07670 Nucleoside recognition YSA_RS13740 PF00005 ABC transporter YSA_RS13745 PF02405 Permease MlaE YSA_RS13760 PF02690 Na+/Pi-cotransporter YSA_RS13765 PF03741 Integral membrane protein TerC family YSA_RS13770 PF03600 Citrate transporter YSA_RS13805 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YSA_RS13805 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YSA_RS13810 PF02233 NAD(P) transhydrogenase beta subunit YSA_RS13815 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YSA_RS13820 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YSA_RS13820 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YSA_RS13825 PF03466 LysR substrate binding domain YSA_RS13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS13830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS13830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS13830 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS13835 PF02515 CoA-transferase family III YSA_RS13860 PF00593 TonB dependent receptor YSA_RS13860 PF07715 TonB-dependent Receptor Plug Domain YSA_RS13875 PF00392 Bacterial regulatory proteins, gntR family YSA_RS13875 PF07729 FCD domain YSA_RS13885 PF13188 PAS domain YSA_RS13885 PF03707 Bacterial signalling protein N terminal repeat YSA_RS13885 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS13885 PF00563 EAL domain YSA_RS13890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS13890 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS13895 PF00005 ABC transporter YSA_RS13895 PF03412 Peptidase C39 family YSA_RS13895 PF00664 ABC transporter transmembrane region YSA_RS13915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YSA_RS13925 PF00005 ABC transporter YSA_RS13930 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS13950 PF04632 Fusaric acid resistance protein family YSA_RS13960 PF13533 Biotin-lipoyl like YSA_RS13965 PF02321 Outer membrane efflux protein YSA_RS13980 PF03239 Iron permease FTR1 family YSA_RS13995 PF14497 Glutathione S-transferase, C-terminal domain YSA_RS13995 PF13417 Glutathione S-transferase, N-terminal domain YSA_RS14000 PF00206 Lyase YSA_RS14000 PF14698 Argininosuccinate lyase C-terminal YSA_RS14005 PF04397 LytTr DNA-binding domain YSA_RS14005 PF00072 Response regulator receiver domain YSA_RS14010 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YSA_RS14010 PF03900 Porphobilinogen deaminase, C-terminal domain YSA_RS14015 PF02602 Uroporphyrinogen-III synthase HemD YSA_RS14030 PF02600 Disulfide bond formation protein DsbB YSA_RS14035 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YSA_RS14040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YSA_RS14040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS14055 PF12848 ABC transporter YSA_RS14055 PF00005 ABC transporter YSA_RS14070 PF01810 LysE type translocator YSA_RS14075 PF01145 SPFH domain / Band 7 family YSA_RS14100 PF00478 IMP dehydrogenase / GMP reductase domain YSA_RS14100 PF00571 CBS domain YSA_RS14120 PF00171 Aldehyde dehydrogenase family YSA_RS14125 PF00202 Aminotransferase class-III YSA_RS14130 PF00072 Response regulator receiver domain YSA_RS14130 PF00486 Transcriptional regulatory protein, C terminal YSA_RS14135 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS14135 PF08448 PAS fold YSA_RS14145 PF00563 EAL domain YSA_RS14145 PF03707 Bacterial signalling protein N terminal repeat YSA_RS14145 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS14150 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14155 PF09383 NIL domain YSA_RS14155 PF00005 ABC transporter YSA_RS14160 PF03180 NLPA lipoprotein YSA_RS14165 PF00296 Luciferase-like monooxygenase YSA_RS14170 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS14170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS14170 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS14175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS14175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS14180 PF00005 ABC transporter YSA_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14190 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS14195 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS14200 PF02028 BCCT, betaine/carnitine/choline family transporter YSA_RS14205 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YSA_RS14210 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14215 PF00005 ABC transporter YSA_RS14220 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YSA_RS14225 PF03573 outer membrane porin, OprD family YSA_RS14230 PF10417 C-terminal domain of 1-Cys peroxiredoxin YSA_RS14230 PF00578 AhpC/TSA family YSA_RS14235 PF03358 NADPH-dependent FMN reductase YSA_RS14240 PF09084 NMT1/THI5 like YSA_RS14245 PF00296 Luciferase-like monooxygenase YSA_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14255 PF00005 ABC transporter YSA_RS14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS14260 PF03459 TOBE domain YSA_RS14270 PF04262 Glutamate-cysteine ligase YSA_RS14280 PF00575 S1 RNA binding domain YSA_RS14280 PF16921 Tex protein YqgF-like domain YSA_RS14280 PF17674 HHH domain YSA_RS14280 PF09371 Tex-like protein N-terminal domain YSA_RS14285 PF00486 Transcriptional regulatory protein, C terminal YSA_RS14285 PF00072 Response regulator receiver domain YSA_RS14290 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS14290 PF00672 HAMP domain YSA_RS14295 PF08443 RimK-like ATP-grasp domain YSA_RS14295 PF18030 RimK PreATP-grasp domain YSA_RS14300 PF18030 RimK PreATP-grasp domain YSA_RS14300 PF08443 RimK-like ATP-grasp domain YSA_RS14305 PF01479 S4 domain YSA_RS14315 PF01430 Hsp33 protein YSA_RS14325 PF01293 Phosphoenolpyruvate carboxykinase YSA_RS14345 PF00384 Molybdopterin oxidoreductase YSA_RS14350 PF02634 FdhD/NarQ family YSA_RS14355 PF04972 BON domain YSA_RS14355 PF01476 LysM domain YSA_RS14360 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS14365 PF00293 NUDIX domain YSA_RS14370 PF00459 Inositol monophosphatase family YSA_RS14380 PF02954 Bacterial regulatory protein, Fis family YSA_RS14380 PF00158 Sigma-54 interaction domain YSA_RS14380 PF00072 Response regulator receiver domain YSA_RS14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS14385 PF02743 Cache domain YSA_RS14385 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS14390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YSA_RS14395 PF04371 Porphyromonas-type peptidyl-arginine deiminase YSA_RS14405 PF00593 TonB dependent receptor YSA_RS14405 PF07715 TonB-dependent Receptor Plug Domain YSA_RS14410 PF03573 outer membrane porin, OprD family YSA_RS14415 PF01645 Conserved region in glutamate synthase YSA_RS14420 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS14420 PF00672 HAMP domain YSA_RS14425 PF00486 Transcriptional regulatory protein, C terminal YSA_RS14425 PF00072 Response regulator receiver domain YSA_RS14430 PF07660 Secretin and TonB N terminus short domain YSA_RS14430 PF00593 TonB dependent receptor YSA_RS14430 PF07715 TonB-dependent Receptor Plug Domain YSA_RS14450 PF00589 Phage integrase family YSA_RS14450 PF13356 Arm DNA-binding domain YSA_RS14495 PF13333 Integrase core domain YSA_RS14495 PF00665 Integrase core domain YSA_RS14495 PF13276 HTH-like domain YSA_RS14525 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14530 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14535 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS14540 PF00005 ABC transporter YSA_RS14550 PF00324 Amino acid permease YSA_RS14560 PF03976 Polyphosphate kinase 2 (PPK2) YSA_RS14570 PF04362 Bacterial Fe(2+) trafficking YSA_RS14575 PF00633 Helix-hairpin-helix motif YSA_RS14575 PF00730 HhH-GPD superfamily base excision DNA repair protein YSA_RS14575 PF14815 NUDIX domain YSA_RS14585 PF07690 Major Facilitator Superfamily YSA_RS14590 PF00475 Imidazoleglycerol-phosphate dehydratase YSA_RS14595 PF00117 Glutamine amidotransferase class-I YSA_RS14605 PF00977 Histidine biosynthesis protein YSA_RS14610 PF00977 Histidine biosynthesis protein YSA_RS14615 PF00005 ABC transporter YSA_RS14615 PF00571 CBS domain YSA_RS14620 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS14625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YSA_RS14630 PF03313 Serine dehydratase alpha chain YSA_RS14630 PF03315 Serine dehydratase beta chain YSA_RS14635 PF01965 DJ-1/PfpI family YSA_RS14635 PF12833 Helix-turn-helix domain YSA_RS14655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YSA_RS14655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YSA_RS14660 PF05853 beta-keto acid cleavage enzyme YSA_RS14670 PF01965 DJ-1/PfpI family YSA_RS14670 PF12833 Helix-turn-helix domain YSA_RS14700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS14705 PF02754 Cysteine-rich domain YSA_RS14705 PF13183 4Fe-4S dicluster domain YSA_RS14710 PF00766 Electron transfer flavoprotein FAD-binding domain YSA_RS14710 PF01012 Electron transfer flavoprotein domain YSA_RS14725 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YSA_RS14725 PF00355 Rieske [2Fe-2S] domain YSA_RS14735 PF00970 Oxidoreductase FAD-binding domain YSA_RS14735 PF00042 Globin YSA_RS14735 PF00175 Oxidoreductase NAD-binding domain YSA_RS14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS14745 PF00672 HAMP domain YSA_RS14745 PF12729 Four helix bundle sensory module for signal transduction YSA_RS14760 PF00672 HAMP domain YSA_RS14760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS14760 PF02743 Cache domain YSA_RS14765 PF01212 Beta-eliminating lyase YSA_RS14770 PF00464 Serine hydroxymethyltransferase YSA_RS14775 PF01266 FAD dependent oxidoreductase YSA_RS14785 PF08669 Glycine cleavage T-protein C-terminal barrel domain YSA_RS14785 PF17806 Sarcosine oxidase A3 domain YSA_RS14785 PF01571 Aminomethyltransferase folate-binding domain YSA_RS14785 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS14795 PF00551 Formyl transferase YSA_RS14800 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS14800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YSA_RS14815 PF01553 Acyltransferase YSA_RS14825 PF00486 Transcriptional regulatory protein, C terminal YSA_RS14825 PF00072 Response regulator receiver domain YSA_RS14830 PF00672 HAMP domain YSA_RS14830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS14830 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS14835 PF06123 Inner membrane protein CreD YSA_RS14845 PF01625 Peptide methionine sulfoxide reductase YSA_RS14850 PF00563 EAL domain YSA_RS14850 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS14850 PF03707 Bacterial signalling protein N terminal repeat YSA_RS14855 PF02817 e3 binding domain YSA_RS14855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YSA_RS14855 PF00364 Biotin-requiring enzyme YSA_RS14860 PF17831 Pyruvate dehydrogenase E1 component middle domain YSA_RS14860 PF00456 Transketolase, thiamine diphosphate binding domain YSA_RS14865 PF08335 GlnD PII-uridylyltransferase YSA_RS14865 PF03710 Glutamate-ammonia ligase adenylyltransferase YSA_RS14870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YSA_RS14875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YSA_RS14880 PF13439 Glycosyltransferase Family 4 YSA_RS14880 PF00534 Glycosyl transferases group 1 YSA_RS14920 PF00593 TonB dependent receptor YSA_RS14920 PF07715 TonB-dependent Receptor Plug Domain YSA_RS14930 PF16220 Domain of unknown function (DUF4880) YSA_RS14930 PF04773 FecR protein YSA_RS14935 PF04542 Sigma-70 region 2 YSA_RS14935 PF08281 Sigma-70, region 4 YSA_RS14940 PF07733 Bacterial DNA polymerase III alpha NTPase domain YSA_RS14940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YSA_RS14940 PF14579 Helix-hairpin-helix motif YSA_RS14940 PF02811 PHP domain YSA_RS14940 PF00929 Exonuclease YSA_RS14945 PF00478 IMP dehydrogenase / GMP reductase domain YSA_RS14945 PF00571 CBS domain YSA_RS14950 PF00072 Response regulator receiver domain YSA_RS14950 PF00158 Sigma-54 interaction domain YSA_RS14955 PF01274 Malate synthase YSA_RS14965 PF00892 EamA-like transporter family YSA_RS14970 PF01636 Phosphotransferase enzyme family YSA_RS14975 PF03459 TOBE domain YSA_RS14975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS14980 PF00156 Phosphoribosyl transferase domain YSA_RS14985 PF06968 Biotin and Thiamin Synthesis associated domain YSA_RS14985 PF04055 Radical SAM superfamily YSA_RS14990 PF00155 Aminotransferase class I and II YSA_RS15000 PF08241 Methyltransferase domain YSA_RS15015 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS15015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS15015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS15015 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS15020 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS15025 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS15025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS15025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS15025 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS15030 PF03466 LysR substrate binding domain YSA_RS15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS15035 PF00202 Aminotransferase class-III YSA_RS15040 PF01679 Proteolipid membrane potential modulator YSA_RS15045 PF00326 Prolyl oligopeptidase family YSA_RS15050 PF04055 Radical SAM superfamily YSA_RS15050 PF13186 Iron-sulfur cluster-binding domain YSA_RS15055 PF05402 Coenzyme PQQ synthesis protein D (PqqD) YSA_RS15060 PF03070 TENA/THI-4/PQQC family YSA_RS15070 PF12706 Beta-lactamase superfamily domain YSA_RS15075 PF08042 PqqA family YSA_RS15080 PF00675 Insulinase (Peptidase family M16) YSA_RS15085 PF00795 Carbon-nitrogen hydrolase YSA_RS15090 PF01593 Flavin containing amine oxidoreductase YSA_RS15100 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS15110 PF03707 Bacterial signalling protein N terminal repeat YSA_RS15110 PF00563 EAL domain YSA_RS15110 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS15115 PF00140 Sigma-70 factor, region 1.2 YSA_RS15115 PF04542 Sigma-70 region 2 YSA_RS15115 PF04539 Sigma-70 region 3 YSA_RS15115 PF03979 Sigma-70 factor, region 1.1 YSA_RS15115 PF04545 Sigma-70, region 4 YSA_RS15115 PF04546 Sigma-70, non-essential region YSA_RS15120 PF01807 CHC2 zinc finger YSA_RS15120 PF08275 DNA primase catalytic core, N-terminal domain YSA_RS15120 PF13662 Toprim domain YSA_RS15120 PF08278 DNA primase DnaG DnaB-binding YSA_RS15120 PF10410 DnaB-helicase binding domain of primase YSA_RS15125 PF01165 Ribosomal protein S21 YSA_RS15130 PF00814 Glycoprotease family YSA_RS15135 PF02660 Glycerol-3-phosphate acyltransferase YSA_RS15140 PF02152 Dihydroneopterin aldolase YSA_RS15155 PF01743 Poly A polymerase head domain YSA_RS15155 PF12627 Probable RNA and SrmB- binding site of polymerase A YSA_RS15160 PF04293 SpoVR like protein YSA_RS15165 PF04285 Protein of unknown function (DUF444) YSA_RS15170 PF06798 PrkA serine protein kinase C-terminal domain YSA_RS15170 PF08298 PrkA AAA domain YSA_RS15175 PF00581 Rhodanese-like domain YSA_RS15180 PF00149 Calcineurin-like phosphoesterase YSA_RS15185 PF04379 ApaG domain YSA_RS15190 PF00398 Ribosomal RNA adenine dimethylase YSA_RS15195 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YSA_RS15200 PF00639 PPIC-type PPIASE domain YSA_RS15200 PF09312 SurA N-terminal domain YSA_RS15205 PF03968 OstA-like protein YSA_RS15205 PF04453 LPS transport system D YSA_RS15210 PF01636 Phosphotransferase enzyme family YSA_RS15215 PF00483 Nucleotidyl transferase YSA_RS15220 PF05099 Tellurite resistance protein TerB YSA_RS15220 PF00226 DnaJ domain YSA_RS15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS15230 PF00672 HAMP domain YSA_RS15230 PF07730 Histidine kinase YSA_RS15235 PF00196 Bacterial regulatory proteins, luxR family YSA_RS15235 PF00072 Response regulator receiver domain YSA_RS15240 PF00005 ABC transporter YSA_RS15240 PF08402 TOBE domain YSA_RS15250 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS15255 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS15260 PF00834 Ribulose-phosphate 3 epimerase family YSA_RS15265 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS15270 PF04715 Anthranilate synthase component I, N terminal region YSA_RS15270 PF00425 chorismate binding enzyme YSA_RS15275 PF00657 GDSL-like Lipase/Acylhydrolase YSA_RS15275 PF03797 Autotransporter beta-domain YSA_RS15280 PF00117 Glutamine amidotransferase class-I YSA_RS15285 PF00591 Glycosyl transferase family, a/b domain YSA_RS15285 PF02885 Glycosyl transferase family, helical bundle domain YSA_RS15290 PF00218 Indole-3-glycerol phosphate synthase YSA_RS15300 PF13545 Crp-like helix-turn-helix domain YSA_RS15300 PF00027 Cyclic nucleotide-binding domain YSA_RS15305 PF02566 OsmC-like protein YSA_RS15315 PF03232 Ubiquinone biosynthesis protein COQ7 YSA_RS15320 PF01230 HIT domain YSA_RS15325 PF00106 short chain dehydrogenase YSA_RS15335 PF03653 Uncharacterised protein family (UPF0093) YSA_RS15340 PF02774 Semialdehyde dehydrogenase, dimerisation domain YSA_RS15340 PF01118 Semialdehyde dehydrogenase, NAD binding domain YSA_RS15345 PF01521 Iron-sulphur cluster biosynthesis YSA_RS15350 PF03702 Anhydro-N-acetylmuramic acid kinase YSA_RS15355 PF01551 Peptidase family M23 YSA_RS15355 PF04225 Opacity-associated protein A LysM-like domain YSA_RS15365 PF01479 S4 domain YSA_RS15365 PF00579 tRNA synthetases class I (W and Y) YSA_RS15395 PF08279 HTH domain YSA_RS15395 PF02237 Biotin protein ligase C terminal domain YSA_RS15395 PF03099 Biotin/lipoate A/B protein ligase family YSA_RS15400 PF03309 Type III pantothenate kinase YSA_RS15425 PF00009 Elongation factor Tu GTP binding domain YSA_RS15425 PF03143 Elongation factor Tu C-terminal domain YSA_RS15425 PF03144 Elongation factor Tu domain 2 YSA_RS15435 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YSA_RS15440 PF00467 KOW motif YSA_RS15440 PF02357 Transcription termination factor nusG YSA_RS15445 PF03946 Ribosomal protein L11, N-terminal domain YSA_RS15445 PF00298 Ribosomal protein L11, RNA binding domain YSA_RS15450 PF00687 Ribosomal protein L1p/L10e family YSA_RS15455 PF00466 Ribosomal protein L10 YSA_RS15460 PF16320 Ribosomal protein L7/L12 dimerisation domain YSA_RS15460 PF00542 Ribosomal protein L7/L12 C-terminal domain YSA_RS15465 PF04565 RNA polymerase Rpb2, domain 3 YSA_RS15465 PF04563 RNA polymerase beta subunit YSA_RS15465 PF04560 RNA polymerase Rpb2, domain 7 YSA_RS15465 PF00562 RNA polymerase Rpb2, domain 6 YSA_RS15465 PF04561 RNA polymerase Rpb2, domain 2 YSA_RS15465 PF10385 RNA polymerase beta subunit external 1 domain YSA_RS15470 PF05000 RNA polymerase Rpb1, domain 4 YSA_RS15470 PF00623 RNA polymerase Rpb1, domain 2 YSA_RS15470 PF04983 RNA polymerase Rpb1, domain 3 YSA_RS15470 PF04997 RNA polymerase Rpb1, domain 1 YSA_RS15470 PF04998 RNA polymerase Rpb1, domain 5 YSA_RS15475 PF00164 Ribosomal protein S12/S23 YSA_RS15480 PF00177 Ribosomal protein S7p/S5e YSA_RS15485 PF00679 Elongation factor G C-terminus YSA_RS15485 PF03144 Elongation factor Tu domain 2 YSA_RS15485 PF00009 Elongation factor Tu GTP binding domain YSA_RS15485 PF14492 Elongation Factor G, domain II YSA_RS15485 PF03764 Elongation factor G, domain IV YSA_RS15490 PF03143 Elongation factor Tu C-terminal domain YSA_RS15490 PF03144 Elongation factor Tu domain 2 YSA_RS15490 PF00009 Elongation factor Tu GTP binding domain YSA_RS15495 PF00338 Ribosomal protein S10p/S20e YSA_RS15500 PF00297 Ribosomal protein L3 YSA_RS15505 PF00573 Ribosomal protein L4/L1 family YSA_RS15510 PF00276 Ribosomal protein L23 YSA_RS15515 PF03947 Ribosomal Proteins L2, C-terminal domain YSA_RS15515 PF00181 Ribosomal Proteins L2, RNA binding domain YSA_RS15520 PF00203 Ribosomal protein S19 YSA_RS15525 PF00237 Ribosomal protein L22p/L17e YSA_RS15530 PF00189 Ribosomal protein S3, C-terminal domain YSA_RS15530 PF07650 KH domain YSA_RS15535 PF00252 Ribosomal protein L16p/L10e YSA_RS15540 PF00831 Ribosomal L29 protein YSA_RS15545 PF00366 Ribosomal protein S17 YSA_RS15550 PF00238 Ribosomal protein L14p/L23e YSA_RS15555 PF00467 KOW motif YSA_RS15555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YSA_RS15560 PF00673 ribosomal L5P family C-terminus YSA_RS15560 PF00281 Ribosomal protein L5 YSA_RS15565 PF00253 Ribosomal protein S14p/S29e YSA_RS15570 PF00410 Ribosomal protein S8 YSA_RS15575 PF00347 Ribosomal protein L6 YSA_RS15580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YSA_RS15585 PF03719 Ribosomal protein S5, C-terminal domain YSA_RS15585 PF00333 Ribosomal protein S5, N-terminal domain YSA_RS15590 PF00327 Ribosomal protein L30p/L7e YSA_RS15595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YSA_RS15600 PF00344 SecY translocase YSA_RS15605 PF00444 Ribosomal protein L36 YSA_RS15610 PF00416 Ribosomal protein S13/S18 YSA_RS15615 PF00411 Ribosomal protein S11 YSA_RS15620 PF01479 S4 domain YSA_RS15620 PF00163 Ribosomal protein S4/S9 N-terminal domain YSA_RS15625 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YSA_RS15625 PF01000 RNA polymerase Rpb3/RpoA insert domain YSA_RS15625 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YSA_RS15630 PF01196 Ribosomal protein L17 YSA_RS15635 PF00199 Catalase YSA_RS15635 PF06628 Catalase-related immune-responsive YSA_RS15640 PF00210 Ferritin-like domain YSA_RS15645 PF17755 UvrA DNA-binding domain YSA_RS15645 PF17760 UvrA interaction domain YSA_RS15650 PF07690 Major Facilitator Superfamily YSA_RS15655 PF00436 Single-strand binding protein family YSA_RS15660 PF00392 Bacterial regulatory proteins, gntR family YSA_RS15660 PF00155 Aminotransferase class I and II YSA_RS15665 PF01925 Sulfite exporter TauE/SafE YSA_RS15670 PF00106 short chain dehydrogenase YSA_RS15675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS15675 PF00384 Molybdopterin oxidoreductase YSA_RS15675 PF01568 Molydopterin dinucleotide binding domain YSA_RS15680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS15680 PF00384 Molybdopterin oxidoreductase YSA_RS15680 PF01568 Molydopterin dinucleotide binding domain YSA_RS15685 PF13247 4Fe-4S dicluster domain YSA_RS15685 PF09163 Formate dehydrogenase N, transmembrane YSA_RS15690 PF01292 Prokaryotic cytochrome b561 YSA_RS15695 PF04216 Protein involved in formate dehydrogenase formation YSA_RS15700 PF03841 L-seryl-tRNA selenium transferase YSA_RS15700 PF12390 Selenocysteine synthase N terminal YSA_RS15705 PF03144 Elongation factor Tu domain 2 YSA_RS15705 PF00009 Elongation factor Tu GTP binding domain YSA_RS15705 PF09106 Elongation factor SelB, winged helix YSA_RS15705 PF09107 Elongation factor SelB, winged helix YSA_RS15715 PF17763 Glutaminase/Asparaginase C-terminal domain YSA_RS15715 PF00710 Asparaginase, N-terminal YSA_RS15720 PF01235 Sodium:alanine symporter family YSA_RS15735 PF01925 Sulfite exporter TauE/SafE YSA_RS15745 PF16363 GDP-mannose 4,6 dehydratase YSA_RS15750 PF01638 HxlR-like helix-turn-helix YSA_RS15755 PF07690 Major Facilitator Superfamily YSA_RS15760 PF03922 OmpW family YSA_RS15780 PF12704 MacB-like periplasmic core domain YSA_RS15780 PF02687 FtsX-like permease family YSA_RS15780 PF00005 ABC transporter YSA_RS15795 PF00085 Thioredoxin YSA_RS15810 PF03477 ATP cone domain YSA_RS15815 PF01872 RibD C-terminal domain YSA_RS15815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YSA_RS15820 PF00677 Lumazine binding domain YSA_RS15825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YSA_RS15825 PF00925 GTP cyclohydrolase II YSA_RS15830 PF00885 6,7-dimethyl-8-ribityllumazine synthase YSA_RS15835 PF01029 NusB family YSA_RS15840 PF02769 AIR synthase related protein, C-terminal domain YSA_RS15840 PF00586 AIR synthase related protein, N-terminal domain YSA_RS15845 PF04608 Phosphatidylglycerophosphatase A YSA_RS15855 PF00925 GTP cyclohydrolase II YSA_RS15865 PF01497 Periplasmic binding protein YSA_RS15870 PF07715 TonB-dependent Receptor Plug Domain YSA_RS15870 PF00593 TonB dependent receptor YSA_RS15880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YSA_RS15880 PF02779 Transketolase, pyrimidine binding domain YSA_RS15880 PF02780 Transketolase, C-terminal domain YSA_RS15885 PF00348 Polyprenyl synthetase YSA_RS15890 PF02609 Exonuclease VII small subunit YSA_RS15895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YSA_RS15905 PF00756 Putative esterase YSA_RS15910 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS15910 PF16750 Sensor domain of 2-component histidine kinase YSA_RS15910 PF00672 HAMP domain YSA_RS15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS15915 PF00072 Response regulator receiver domain YSA_RS15915 PF00486 Transcriptional regulatory protein, C terminal YSA_RS15920 PF07715 TonB-dependent Receptor Plug Domain YSA_RS15920 PF00593 TonB dependent receptor YSA_RS15920 PF07660 Secretin and TonB N terminus short domain YSA_RS15935 PF05275 Copper resistance protein B precursor (CopB) YSA_RS15945 PF07731 Multicopper oxidase YSA_RS15945 PF07732 Multicopper oxidase YSA_RS15945 PF00394 Multicopper oxidase YSA_RS15955 PF00719 Inorganic pyrophosphatase YSA_RS15960 PF06167 Glucose-regulated metallo-peptidase M90 YSA_RS15965 PF09335 SNARE associated Golgi protein YSA_RS15970 PF00583 Acetyltransferase (GNAT) family YSA_RS15975 PF05985 Ethanolamine ammonia-lyase light chain (EutC) YSA_RS15980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) YSA_RS15985 PF13520 Amino acid permease YSA_RS15990 PF00171 Aldehyde dehydrogenase family YSA_RS15995 PF02954 Bacterial regulatory protein, Fis family YSA_RS15995 PF01590 GAF domain YSA_RS15995 PF00158 Sigma-54 interaction domain YSA_RS16000 PF08245 Mur ligase middle domain YSA_RS16000 PF02875 Mur ligase family, glutamate ligase domain YSA_RS16000 PF01225 Mur ligase family, catalytic domain YSA_RS16005 PF02441 Flavoprotein YSA_RS16015 PF13460 NAD(P)H-binding YSA_RS16025 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS16025 PF00107 Zinc-binding dehydrogenase YSA_RS16030 PF00364 Biotin-requiring enzyme YSA_RS16030 PF00561 alpha/beta hydrolase fold YSA_RS16035 PF02780 Transketolase, C-terminal domain YSA_RS16035 PF02779 Transketolase, pyrimidine binding domain YSA_RS16040 PF00676 Dehydrogenase E1 component YSA_RS16045 PF01513 ATP-NAD kinase YSA_RS16050 PF00158 Sigma-54 interaction domain YSA_RS16050 PF02954 Bacterial regulatory protein, Fis family YSA_RS16050 PF01590 GAF domain YSA_RS16055 PF00289 Biotin carboxylase, N-terminal domain YSA_RS16055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YSA_RS16055 PF02785 Biotin carboxylase C-terminal domain YSA_RS16060 PF00364 Biotin-requiring enzyme YSA_RS16065 PF01220 Dehydroquinase class II YSA_RS16070 PF11412 Disulphide bond corrector protein DsbC YSA_RS16070 PF02683 Cytochrome C biogenesis protein transmembrane region YSA_RS16080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS16085 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS16085 PF00072 Response regulator receiver domain YSA_RS16095 PF00293 NUDIX domain YSA_RS16100 PF01253 Translation initiation factor SUI1 YSA_RS16105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YSA_RS16105 PF17944 Arginine decarboxylase C-terminal helical extension YSA_RS16105 PF17810 Arginine decarboxylase helical bundle domain YSA_RS16115 PF01554 MatE YSA_RS16120 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YSA_RS16120 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YSA_RS16120 PF07678 A-macroglobulin TED domain YSA_RS16120 PF00207 Alpha-2-macroglobulin family YSA_RS16120 PF01835 MG2 domain YSA_RS16120 PF17962 Bacterial macroglobulin domain 6 YSA_RS16120 PF07703 Alpha-2-macroglobulin bait region domain YSA_RS16120 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YSA_RS16120 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain YSA_RS16130 PF00912 Transglycosylase YSA_RS16130 PF06832 Penicillin-Binding Protein C-terminus Family YSA_RS16130 PF00905 Penicillin binding protein transpeptidase domain YSA_RS16135 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YSA_RS16135 PF08479 POTRA domain, ShlB-type YSA_RS16140 PF00072 Response regulator receiver domain YSA_RS16140 PF00196 Bacterial regulatory proteins, luxR family YSA_RS16160 PF13847 Methyltransferase domain YSA_RS16170 PF01575 MaoC like domain YSA_RS16180 PF02803 Thiolase, C-terminal domain YSA_RS16180 PF00108 Thiolase, N-terminal domain YSA_RS16185 PF02311 AraC-like ligand binding domain YSA_RS16185 PF12833 Helix-turn-helix domain YSA_RS16190 PF00672 HAMP domain YSA_RS16190 PF17200 Single Cache domain 2 YSA_RS16190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS16195 PF00376 MerR family regulatory protein YSA_RS16195 PF09278 MerR, DNA binding YSA_RS16200 PF00403 Heavy-metal-associated domain YSA_RS16215 PF07690 Major Facilitator Superfamily YSA_RS16230 PF00962 Adenosine/AMP deaminase YSA_RS16240 PF01205 Uncharacterized protein family UPF0029 YSA_RS16240 PF09186 Domain of unknown function (DUF1949) YSA_RS16245 PF00440 Bacterial regulatory proteins, tetR family YSA_RS16245 PF08362 YcdC-like protein, C-terminal region YSA_RS16250 PF03466 LysR substrate binding domain YSA_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS16255 PF00202 Aminotransferase class-III YSA_RS16260 PF00171 Aldehyde dehydrogenase family YSA_RS16290 PF04403 Paraquat-inducible protein A YSA_RS16295 PF04403 Paraquat-inducible protein A YSA_RS16300 PF02470 MlaD protein YSA_RS16305 PF01649 Ribosomal protein S20 YSA_RS16310 PF03023 Lipid II flippase MurJ YSA_RS16315 PF06574 FAD synthetase YSA_RS16315 PF01687 Riboflavin kinase YSA_RS16320 PF00133 tRNA synthetases class I (I, L, M and V) YSA_RS16320 PF06827 Zinc finger found in FPG and IleRS YSA_RS16320 PF08264 Anticodon-binding domain of tRNA YSA_RS16325 PF01252 Signal peptidase (SPase) II YSA_RS16330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS16335 PF02401 LytB protein YSA_RS16360 PF07963 Prokaryotic N-terminal methylation motif YSA_RS16360 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor YSA_RS16365 PF01266 FAD dependent oxidoreductase YSA_RS16370 PF01425 Amidase YSA_RS16375 PF01546 Peptidase family M20/M25/M40 YSA_RS16375 PF07687 Peptidase dimerisation domain YSA_RS16380 PF00005 ABC transporter YSA_RS16385 PF00005 ABC transporter YSA_RS16385 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS16390 PF02653 Branched-chain amino acid transport system / permease component YSA_RS16395 PF02653 Branched-chain amino acid transport system / permease component YSA_RS16400 PF13458 Periplasmic binding protein YSA_RS16420 PF13525 Outer membrane lipoprotein YSA_RS16425 PF01479 S4 domain YSA_RS16425 PF00849 RNA pseudouridylate synthase YSA_RS16430 PF02578 Multi-copper polyphenol oxidoreductase laccase YSA_RS16435 PF02861 Clp amino terminal domain, pathogenicity island component YSA_RS16435 PF17871 AAA lid domain YSA_RS16435 PF07724 AAA domain (Cdc48 subfamily) YSA_RS16435 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS16435 PF10431 C-terminal, D2-small domain, of ClpB protein YSA_RS16465 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS16490 PF03884 DNA gyrase inhibitor YacG YSA_RS16495 PF01121 Dephospho-CoA kinase YSA_RS16500 PF06750 Bacterial Peptidase A24 N-terminal domain YSA_RS16500 PF01478 Type IV leader peptidase family YSA_RS16505 PF00482 Type II secretion system (T2SS), protein F YSA_RS16510 PF00114 Pilin (bacterial filament) YSA_RS16510 PF07963 Prokaryotic N-terminal methylation motif YSA_RS16525 PF00313 'Cold-shock' DNA-binding domain YSA_RS16595 PF00293 NUDIX domain YSA_RS16625 PF02447 GntP family permease YSA_RS16635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YSA_RS16635 PF00056 lactate/malate dehydrogenase, NAD binding domain YSA_RS16640 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS16645 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS16650 PF02219 Methylenetetrahydrofolate reductase YSA_RS16650 PF02574 Homocysteine S-methyltransferase YSA_RS16655 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS16660 PF00324 Amino acid permease YSA_RS16665 PF03466 LysR substrate binding domain YSA_RS16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS16670 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS16670 PF14821 Threonine synthase N terminus YSA_RS16680 PF00742 Homoserine dehydrogenase YSA_RS16680 PF03447 Homoserine dehydrogenase, NAD binding domain YSA_RS16685 PF00171 Aldehyde dehydrogenase family YSA_RS16700 PF00464 Serine hydroxymethyltransferase YSA_RS16705 PF03707 Bacterial signalling protein N terminal repeat YSA_RS16705 PF00563 EAL domain YSA_RS16705 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS16720 PF12848 ABC transporter YSA_RS16720 PF00005 ABC transporter YSA_RS16725 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YSA_RS16725 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YSA_RS16730 PF01272 Transcription elongation factor, GreA/GreB, C-term YSA_RS16730 PF03449 Transcription elongation factor, N-terminal YSA_RS16750 PF05362 Lon protease (S16) C-terminal proteolytic domain YSA_RS16750 PF13654 AAA domain YSA_RS16760 PF03350 Uncharacterized protein family, UPF0114 YSA_RS16770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS16770 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YSA_RS16775 PF12804 MobA-like NTP transferase domain YSA_RS16775 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS16780 PF03831 PhnA domain YSA_RS16780 PF08274 PhnA Zinc-Ribbon YSA_RS16785 PF00348 Polyprenyl synthetase YSA_RS16790 PF00829 Ribosomal prokaryotic L21 protein YSA_RS16795 PF01016 Ribosomal L27 protein YSA_RS16800 PF01018 GTP1/OBG YSA_RS16800 PF01926 50S ribosome-binding GTPase YSA_RS16805 PF01472 PUA domain YSA_RS16805 PF00696 Amino acid kinase family YSA_RS16810 PF05981 CreA protein YSA_RS16840 PF00583 Acetyltransferase (GNAT) family YSA_RS16850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS16850 PF03466 LysR substrate binding domain YSA_RS16870 PF07690 Major Facilitator Superfamily YSA_RS16880 PF04773 FecR protein YSA_RS16880 PF16220 Domain of unknown function (DUF4880) YSA_RS16885 PF08281 Sigma-70, region 4 YSA_RS16885 PF04542 Sigma-70 region 2 YSA_RS16895 PF02805 Metal binding domain of Ada YSA_RS16895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YSA_RS16895 PF12833 Helix-turn-helix domain YSA_RS16895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YSA_RS16900 PF12794 Mechanosensitive ion channel inner membrane domain 1 YSA_RS16900 PF00924 Mechanosensitive ion channel YSA_RS16900 PF12795 Mechanosensitive ion channel porin domain YSA_RS16915 PF00171 Aldehyde dehydrogenase family YSA_RS16930 PF00857 Isochorismatase family YSA_RS16935 PF03976 Polyphosphate kinase 2 (PPK2) YSA_RS16940 PF00999 Sodium/hydrogen exchanger family YSA_RS16940 PF02254 TrkA-N domain YSA_RS16945 PF01594 AI-2E family transporter YSA_RS16950 PF02321 Outer membrane efflux protein YSA_RS16955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS16955 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS16965 PF00916 Sulfate permease family YSA_RS16965 PF01740 STAS domain YSA_RS16970 PF01926 50S ribosome-binding GTPase YSA_RS16970 PF06071 Protein of unknown function (DUF933) YSA_RS16975 PF01195 Peptidyl-tRNA hydrolase YSA_RS16980 PF01386 Ribosomal L25p family YSA_RS16980 PF14693 Ribosomal protein TL5, C-terminal domain YSA_RS16985 PF14572 Phosphoribosyl synthetase-associated domain YSA_RS16985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YSA_RS16995 PF08544 GHMP kinases C terminal YSA_RS16995 PF00288 GHMP kinases N terminal domain YSA_RS17000 PF03550 Outer membrane lipoprotein LolB YSA_RS17030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YSA_RS17030 PF01488 Shikimate / quinate 5-dehydrogenase YSA_RS17030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YSA_RS17035 PF03462 PCRF domain YSA_RS17035 PF00472 RF-1 domain YSA_RS17040 PF05175 Methyltransferase small domain YSA_RS17040 PF17827 PrmC N-terminal domain YSA_RS17045 PF00899 ThiF family YSA_RS17050 PF01177 Asp/Glu/Hydantoin racemase YSA_RS17055 PF09411 Lipid A 3-O-deacylase (PagL) YSA_RS17060 PF00106 short chain dehydrogenase YSA_RS17065 PF03441 FAD binding domain of DNA photolyase YSA_RS17065 PF00875 DNA photolyase YSA_RS17070 PF13411 MerR HTH family regulatory protein YSA_RS17080 PF01593 Flavin containing amine oxidoreductase YSA_RS17085 PF01370 NAD dependent epimerase/dehydratase family YSA_RS17085 PF08338 Domain of unknown function (DUF1731) YSA_RS17090 PF00762 Ferrochelatase YSA_RS17095 PF00860 Permease family YSA_RS17105 PF00156 Phosphoribosyl transferase domain YSA_RS17130 PF06039 Malate:quinone oxidoreductase (Mqo) YSA_RS17170 PF02586 SOS response associated peptidase (SRAP) YSA_RS17180 PF01169 Uncharacterized protein family UPF0016 YSA_RS17185 PF05175 Methyltransferase small domain YSA_RS17185 PF08468 Methyltransferase small domain N-terminal YSA_RS17190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS17190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS17200 PF13193 AMP-binding enzyme C-terminal domain YSA_RS17200 PF00501 AMP-binding enzyme YSA_RS17215 PF07044 Protein of unknown function (DUF1329) YSA_RS17225 PF00069 Protein kinase domain YSA_RS17225 PF13191 AAA ATPase domain YSA_RS17240 PF00753 Metallo-beta-lactamase superfamily YSA_RS17245 PF00691 OmpA family YSA_RS17245 PF13488 Glycine zipper YSA_RS17250 PF01515 Phosphate acetyl/butaryl transferase YSA_RS17250 PF07085 DRTGG domain YSA_RS17260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS17265 PF00255 Glutathione peroxidase YSA_RS17270 PF13439 Glycosyltransferase Family 4 YSA_RS17270 PF00534 Glycosyl transferases group 1 YSA_RS17275 PF13426 PAS domain YSA_RS17275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS17275 PF08447 PAS fold YSA_RS17300 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS17305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YSA_RS17305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YSA_RS17315 PF01510 N-acetylmuramoyl-L-alanine amidase YSA_RS17325 PF01026 TatD related DNase YSA_RS17330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YSA_RS17330 PF00356 Bacterial regulatory proteins, lacI family YSA_RS17335 PF05524 PEP-utilising enzyme, N-terminal YSA_RS17335 PF00391 PEP-utilising enzyme, mobile domain YSA_RS17335 PF00381 PTS HPr component phosphorylation site YSA_RS17335 PF02896 PEP-utilising enzyme, TIM barrel domain YSA_RS17335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YSA_RS17340 PF00294 pfkB family carbohydrate kinase YSA_RS17345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YSA_RS17345 PF02378 Phosphotransferase system, EIIC YSA_RS17350 PF12843 Putative quorum-sensing-regulated virulence factor YSA_RS17360 PF01590 GAF domain YSA_RS17360 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS17360 PF00360 Phytochrome region YSA_RS17360 PF00563 EAL domain YSA_RS17365 PF03573 outer membrane porin, OprD family YSA_RS17385 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS17385 PF08448 PAS fold YSA_RS17385 PF13188 PAS domain YSA_RS17385 PF00072 Response regulator receiver domain YSA_RS17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS17390 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS17395 PF00664 ABC transporter transmembrane region YSA_RS17395 PF03412 Peptidase C39 family YSA_RS17395 PF00005 ABC transporter YSA_RS17400 PF02321 Outer membrane efflux protein YSA_RS17410 PF02954 Bacterial regulatory protein, Fis family YSA_RS17410 PF00158 Sigma-54 interaction domain YSA_RS17415 PF00042 Globin YSA_RS17415 PF00175 Oxidoreductase NAD-binding domain YSA_RS17415 PF00970 Oxidoreductase FAD-binding domain YSA_RS17425 PF02600 Disulfide bond formation protein DsbB YSA_RS17430 PF06481 COX Aromatic Rich Motif YSA_RS17430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YSA_RS17435 PF00115 Cytochrome C and Quinol oxidase polypeptide I YSA_RS17440 PF00510 Cytochrome c oxidase subunit III YSA_RS17445 PF03626 Prokaryotic Cytochrome C oxidase subunit IV YSA_RS17450 PF01040 UbiA prenyltransferase family YSA_RS17455 PF00155 Aminotransferase class I and II YSA_RS17465 PF03692 Putative zinc- or iron-chelating domain YSA_RS17475 PF13302 Acetyltransferase (GNAT) domain YSA_RS17480 PF08281 Sigma-70, region 4 YSA_RS17480 PF04542 Sigma-70 region 2 YSA_RS17490 PF07660 Secretin and TonB N terminus short domain YSA_RS17490 PF07715 TonB-dependent Receptor Plug Domain YSA_RS17490 PF00593 TonB dependent receptor YSA_RS17510 PF00586 AIR synthase related protein, N-terminal domain YSA_RS17510 PF02769 AIR synthase related protein, C-terminal domain YSA_RS17520 PF00005 ABC transporter YSA_RS17525 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17530 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17535 PF01062 Bestrophin, RFP-TM, chloride channel YSA_RS17540 PF05973 Phage derived protein Gp49-like (DUF891) YSA_RS17570 PF01266 FAD dependent oxidoreductase YSA_RS17585 PF02547 Queuosine biosynthesis protein YSA_RS17590 PF01702 Queuine tRNA-ribosyltransferase YSA_RS17595 PF02699 Preprotein translocase subunit YSA_RS17600 PF02355 Protein export membrane protein YSA_RS17600 PF13721 SecD export protein N-terminal TM region YSA_RS17600 PF07549 SecD/SecF GG Motif YSA_RS17605 PF07549 SecD/SecF GG Motif YSA_RS17605 PF02355 Protein export membrane protein YSA_RS17610 PF05433 Glycine zipper 2TM domain YSA_RS17620 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 YSA_RS17620 PF13542 Helix-turn-helix domain of transposase family ISL3 YSA_RS17620 PF01610 Transposase YSA_RS17625 PF00459 Inositol monophosphatase family YSA_RS17630 PF00588 SpoU rRNA Methylase family YSA_RS17635 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS17635 PF06426 Serine acetyltransferase, N-terminal YSA_RS17640 PF02082 Transcriptional regulator YSA_RS17645 PF00266 Aminotransferase class-V YSA_RS17650 PF01592 NifU-like N terminal domain YSA_RS17655 PF01521 Iron-sulphur cluster biosynthesis YSA_RS17660 PF07743 HSCB C-terminal oligomerisation domain YSA_RS17660 PF00226 DnaJ domain YSA_RS17665 PF00012 Hsp70 protein YSA_RS17670 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS17675 PF04384 Iron-sulphur cluster assembly YSA_RS17680 PF00334 Nucleoside diphosphate kinase YSA_RS17685 PF04055 Radical SAM superfamily YSA_RS17695 PF13464 Domain of unknown function (DUF4115) YSA_RS17700 PF04551 GcpE protein YSA_RS17705 PF13393 Histidyl-tRNA synthetase YSA_RS17705 PF03129 Anticodon binding domain YSA_RS17715 PF13360 PQQ-like domain YSA_RS17720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YSA_RS17720 PF01926 50S ribosome-binding GTPase YSA_RS17725 PF00155 Aminotransferase class I and II YSA_RS17730 PF00795 Carbon-nitrogen hydrolase YSA_RS17740 PF00667 FAD binding domain YSA_RS17740 PF00258 Flavodoxin YSA_RS17740 PF00175 Oxidoreductase NAD-binding domain YSA_RS17745 PF07715 TonB-dependent Receptor Plug Domain YSA_RS17745 PF00593 TonB dependent receptor YSA_RS17750 PF13640 2OG-Fe(II) oxygenase superfamily YSA_RS17750 PF18331 PKHD-type hydroxylase C-terminal domain YSA_RS17765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YSA_RS17765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YSA_RS17770 PF04542 Sigma-70 region 2 YSA_RS17770 PF08281 Sigma-70, region 4 YSA_RS17780 PF00593 TonB dependent receptor YSA_RS17780 PF07660 Secretin and TonB N terminus short domain YSA_RS17780 PF07715 TonB-dependent Receptor Plug Domain YSA_RS17785 PF00005 ABC transporter YSA_RS17785 PF00571 CBS domain YSA_RS17790 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17795 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YSA_RS17800 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17810 PF00009 Elongation factor Tu GTP binding domain YSA_RS17810 PF03144 Elongation factor Tu domain 2 YSA_RS17810 PF16658 Class II release factor RF3, C-terminal domain YSA_RS17815 PF13416 Bacterial extracellular solute-binding protein YSA_RS17825 PF00355 Rieske [2Fe-2S] domain YSA_RS17825 PF01266 FAD dependent oxidoreductase YSA_RS17850 PF00005 ABC transporter YSA_RS17850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YSA_RS17855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YSA_RS17855 PF00005 ABC transporter YSA_RS17860 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17860 PF12911 N-terminal TM domain of oligopeptide transport permease C YSA_RS17865 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS17870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS17875 PF03573 outer membrane porin, OprD family YSA_RS17880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS17885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS17895 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS17895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS17900 PF00072 Response regulator receiver domain YSA_RS17900 PF02954 Bacterial regulatory protein, Fis family YSA_RS17920 PF13091 PLD-like domain YSA_RS17920 PF13396 Phospholipase_D-nuclease N-terminal YSA_RS17925 PF01965 DJ-1/PfpI family YSA_RS17940 PF00795 Carbon-nitrogen hydrolase YSA_RS17940 PF00583 Acetyltransferase (GNAT) family YSA_RS17945 PF05683 Fumarase C-terminus YSA_RS17945 PF05681 Fumarate hydratase (Fumerase) YSA_RS17955 PF00970 Oxidoreductase FAD-binding domain YSA_RS17955 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS17955 PF00175 Oxidoreductase NAD-binding domain YSA_RS17965 PF00072 Response regulator receiver domain YSA_RS17965 PF00486 Transcriptional regulatory protein, C terminal YSA_RS17970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS17970 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS17970 PF08521 Two-component sensor kinase N-terminal YSA_RS17990 PF00873 AcrB/AcrD/AcrF family YSA_RS17995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS18030 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS18030 PF03707 Bacterial signalling protein N terminal repeat YSA_RS18030 PF00563 EAL domain YSA_RS18035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YSA_RS18035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YSA_RS18040 PF01810 LysE type translocator YSA_RS18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS18045 PF03466 LysR substrate binding domain YSA_RS18050 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family YSA_RS18060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS18095 PF00324 Amino acid permease YSA_RS18100 PF01699 Sodium/calcium exchanger protein YSA_RS18105 PF05036 Sporulation related domain YSA_RS18105 PF03330 Lytic transglycolase YSA_RS18110 PF02637 GatB domain YSA_RS18110 PF02934 GatB/GatE catalytic domain YSA_RS18115 PF01425 Amidase YSA_RS18120 PF02686 Glu-tRNAGln amidotransferase C subunit YSA_RS18130 PF04085 rod shape-determining protein MreC YSA_RS18140 PF02545 Maf-like protein YSA_RS18145 PF00575 S1 RNA binding domain YSA_RS18145 PF10150 Ribonuclease E/G family YSA_RS18155 PF00795 Carbon-nitrogen hydrolase YSA_RS18160 PF01523 Putative modulator of DNA gyrase YSA_RS18165 PF04751 Protein of unknown function (DUF615) YSA_RS18170 PF01523 Putative modulator of DNA gyrase YSA_RS18180 PF10415 Fumarase C C-terminus YSA_RS18180 PF00206 Lyase YSA_RS18190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YSA_RS18190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YSA_RS18195 PF02535 ZIP Zinc transporter YSA_RS18200 PF00381 PTS HPr component phosphorylation site YSA_RS18205 PF03668 P-loop ATPase protein family YSA_RS18210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YSA_RS18215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YSA_RS18220 PF04552 Sigma-54, DNA binding domain YSA_RS18220 PF00309 Sigma-54 factor, Activator interacting domain (AID) YSA_RS18220 PF04963 Sigma-54 factor, core binding domain YSA_RS18225 PF00005 ABC transporter YSA_RS18225 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS18230 PF03968 OstA-like protein YSA_RS18245 PF01380 SIS domain YSA_RS18245 PF00571 CBS domain YSA_RS18250 PF00005 ABC transporter YSA_RS18255 PF02405 Permease MlaE YSA_RS18260 PF02470 MlaD protein YSA_RS18265 PF05494 MlaC protein YSA_RS18280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YSA_RS18285 PF01634 ATP phosphoribosyltransferase YSA_RS18290 PF00815 Histidinol dehydrogenase YSA_RS18295 PF00155 Aminotransferase class I and II YSA_RS18305 PF07729 FCD domain YSA_RS18305 PF00392 Bacterial regulatory proteins, gntR family YSA_RS18310 PF07690 Major Facilitator Superfamily YSA_RS18320 PF01541 GIY-YIG catalytic domain YSA_RS18325 PF04245 37-kD nucleoid-associated bacterial protein YSA_RS18330 PF00216 Bacterial DNA-binding protein YSA_RS18335 PF05971 RNA methyltransferase YSA_RS18340 PF10458 Valyl tRNA synthetase tRNA binding arm YSA_RS18340 PF08264 Anticodon-binding domain of tRNA YSA_RS18340 PF00133 tRNA synthetases class I (I, L, M and V) YSA_RS18350 PF04364 DNA polymerase III chi subunit, HolC YSA_RS18355 PF02789 Cytosol aminopeptidase family, N-terminal domain YSA_RS18355 PF00883 Cytosol aminopeptidase family, catalytic domain YSA_RS18365 PF03739 Lipopolysaccharide export system permease LptF/LptG YSA_RS18370 PF03739 Lipopolysaccharide export system permease LptF/LptG YSA_RS18380 PF00313 'Cold-shock' DNA-binding domain YSA_RS18385 PF01571 Aminomethyltransferase folate-binding domain YSA_RS18385 PF08669 Glycine cleavage T-protein C-terminal barrel domain YSA_RS18390 PF03313 Serine dehydratase alpha chain YSA_RS18390 PF03315 Serine dehydratase beta chain YSA_RS18395 PF02347 Glycine cleavage system P-protein YSA_RS18400 PF01597 Glycine cleavage H-protein YSA_RS18415 PF05114 Protein of unknown function (DUF692) YSA_RS18425 PF04542 Sigma-70 region 2 YSA_RS18425 PF08281 Sigma-70, region 4 YSA_RS18430 PF06532 Negative regulator of sigma F YSA_RS18435 PF03616 Sodium/glutamate symporter YSA_RS18440 PF00158 Sigma-54 interaction domain YSA_RS18440 PF18024 Helix-turn-helix domain YSA_RS18450 PF00696 Amino acid kinase family YSA_RS18455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YSA_RS18455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YSA_RS18465 PF13520 Amino acid permease YSA_RS18470 PF13520 Amino acid permease YSA_RS18475 PF04304 Protein of unknown function (DUF454) YSA_RS18480 PF01126 Heme oxygenase YSA_RS18485 PF00593 TonB dependent receptor YSA_RS18485 PF07715 TonB-dependent Receptor Plug Domain YSA_RS18495 PF08281 Sigma-70, region 4 YSA_RS18495 PF04542 Sigma-70 region 2 YSA_RS18500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YSA_RS18500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YSA_RS18505 PF00920 Dehydratase family YSA_RS18510 PF02685 Glucokinase YSA_RS18515 PF00486 Transcriptional regulatory protein, C terminal YSA_RS18515 PF00072 Response regulator receiver domain YSA_RS18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS18520 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS18520 PF00672 HAMP domain YSA_RS18530 PF01547 Bacterial extracellular solute-binding protein YSA_RS18535 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS18540 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS18545 PF00005 ABC transporter YSA_RS18545 PF17912 MalK OB fold domain YSA_RS18545 PF03459 TOBE domain YSA_RS18550 PF04966 Carbohydrate-selective porin, OprB family YSA_RS18555 PF01263 Aldose 1-epimerase YSA_RS18560 PF01418 Helix-turn-helix domain, rpiR family YSA_RS18560 PF01380 SIS domain YSA_RS18565 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YSA_RS18565 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YSA_RS18570 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YSA_RS18575 PF01081 KDPG and KHG aldolase YSA_RS18590 PF00682 HMGL-like YSA_RS18590 PF08502 LeuA allosteric (dimerisation) domain YSA_RS18600 PF01551 Peptidase family M23 YSA_RS18600 PF08525 Opacity-associated protein A N-terminal motif YSA_RS18600 PF01476 LysM domain YSA_RS18605 PF02601 Exonuclease VII, large subunit YSA_RS18605 PF13742 OB-fold nucleic acid binding domain YSA_RS18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS18610 PF03466 LysR substrate binding domain YSA_RS18625 PF00478 IMP dehydrogenase / GMP reductase domain YSA_RS18625 PF00571 CBS domain YSA_RS18630 PF00117 Glutamine amidotransferase class-I YSA_RS18630 PF00958 GMP synthase C terminal domain YSA_RS18630 PF02540 NAD synthase YSA_RS18635 PF03747 ADP-ribosylglycohydrolase YSA_RS18640 PF01129 NAD:arginine ADP-ribosyltransferase YSA_RS18645 PF07732 Multicopper oxidase YSA_RS18645 PF07731 Multicopper oxidase YSA_RS18645 PF00394 Multicopper oxidase YSA_RS18650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YSA_RS18655 PF01464 Transglycosylase SLT domain YSA_RS18655 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS18660 PF02769 AIR synthase related protein, C-terminal domain YSA_RS18660 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YSA_RS18660 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YSA_RS18665 PF01784 NIF3 (NGG1p interacting factor 3) YSA_RS18670 PF00902 Sec-independent protein translocase protein (TatC) YSA_RS18675 PF02416 mttA/Hcf106 family YSA_RS18680 PF02416 mttA/Hcf106 family YSA_RS18685 PF03934 Type II secretion system (T2SS), protein K YSA_RS18705 PF03958 Bacterial type II/III secretion system short domain YSA_RS18705 PF00263 Bacterial type II and III secretion system protein YSA_RS18710 PF00437 Type II/IV secretion system protein YSA_RS18715 PF00482 Type II secretion system (T2SS), protein F YSA_RS18720 PF08334 Type II secretion system (T2SS), protein G YSA_RS18720 PF07963 Prokaryotic N-terminal methylation motif YSA_RS18730 PF07963 Prokaryotic N-terminal methylation motif YSA_RS18730 PF02501 Type II secretion system (T2SS), protein I YSA_RS18755 PF08021 Siderophore-interacting FAD-binding domain YSA_RS18755 PF04954 Siderophore-interacting protein YSA_RS18760 PF03551 Transcriptional regulator PadR-like family YSA_RS18770 PF00324 Amino acid permease YSA_RS18775 PF01645 Conserved region in glutamate synthase YSA_RS18780 PF00270 DEAD/DEAH box helicase YSA_RS18780 PF00271 Helicase conserved C-terminal domain YSA_RS18780 PF08494 DEAD/H associated YSA_RS18785 PF00293 NUDIX domain YSA_RS18790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS18790 PF03466 LysR substrate binding domain YSA_RS18795 PF00561 alpha/beta hydrolase fold YSA_RS18800 PF06942 GlpM protein YSA_RS18805 PF00072 Response regulator receiver domain YSA_RS18805 PF02954 Bacterial regulatory protein, Fis family YSA_RS18805 PF00158 Sigma-54 interaction domain YSA_RS18810 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS18810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS18810 PF02743 Cache domain YSA_RS18815 PF00005 ABC transporter YSA_RS18820 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS18825 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS18830 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS18840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YSA_RS18840 PF01266 FAD dependent oxidoreductase YSA_RS18845 PF00455 DeoR C terminal sensor domain YSA_RS18845 PF08220 DeoR-like helix-turn-helix domain YSA_RS18850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YSA_RS18850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YSA_RS18855 PF00230 Major intrinsic protein YSA_RS18860 PF04073 Aminoacyl-tRNA editing domain YSA_RS18865 PF00005 ABC transporter YSA_RS18865 PF08402 TOBE domain YSA_RS18870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YSA_RS18870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YSA_RS18875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS18875 PF00384 Molybdopterin oxidoreductase YSA_RS18875 PF01568 Molydopterin dinucleotide binding domain YSA_RS18880 PF00462 Glutaredoxin YSA_RS18885 PF00210 Ferritin-like domain YSA_RS18890 PF04324 BFD-like [2Fe-2S] binding domain YSA_RS18900 PF00578 AhpC/TSA family YSA_RS18900 PF10417 C-terminal domain of 1-Cys peroxiredoxin YSA_RS18905 PF00929 Exonuclease YSA_RS18910 PF01979 Amidohydrolase family YSA_RS18920 PF00764 Arginosuccinate synthase YSA_RS18930 PF00072 Response regulator receiver domain YSA_RS18930 PF00196 Bacterial regulatory proteins, luxR family YSA_RS18935 PF00730 HhH-GPD superfamily base excision DNA repair protein YSA_RS18935 PF10576 Iron-sulfur binding domain of endonuclease III YSA_RS18935 PF00633 Helix-hairpin-helix motif YSA_RS18940 PF02508 Rnf-Nqr subunit, membrane protein YSA_RS18945 PF04205 FMN-binding domain YSA_RS18950 PF03116 NQR2, RnfD, RnfE family YSA_RS18955 PF02508 Rnf-Nqr subunit, membrane protein YSA_RS18960 PF09334 tRNA synthetases class I (M) YSA_RS18960 PF01588 Putative tRNA binding domain YSA_RS18965 PF10609 NUBPL iron-transfer P-loop NTPase YSA_RS18970 PF00313 'Cold-shock' DNA-binding domain YSA_RS18975 PF00692 dUTPase YSA_RS18990 PF08494 DEAD/H associated YSA_RS18990 PF00271 Helicase conserved C-terminal domain YSA_RS18990 PF00270 DEAD/DEAH box helicase YSA_RS19000 PF04675 DNA ligase N terminus YSA_RS19000 PF04679 ATP dependent DNA ligase C terminal region YSA_RS19000 PF01068 ATP dependent DNA ligase domain YSA_RS19005 PF01068 ATP dependent DNA ligase domain YSA_RS19005 PF04679 ATP dependent DNA ligase C terminal region YSA_RS19005 PF04675 DNA ligase N terminus YSA_RS19010 PF01804 Penicillin amidase YSA_RS19015 PF00155 Aminotransferase class I and II YSA_RS19015 PF00392 Bacterial regulatory proteins, gntR family YSA_RS19020 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS19025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YSA_RS19025 PF01411 tRNA synthetases class II (A) YSA_RS19025 PF02272 DHHA1 domain YSA_RS19030 PF07690 Major Facilitator Superfamily YSA_RS19045 PF07516 SecA Wing and Scaffold domain YSA_RS19045 PF01043 SecA preprotein cross-linking domain YSA_RS19045 PF02810 SEC-C motif YSA_RS19045 PF07517 SecA DEAD-like domain YSA_RS19055 PF02810 SEC-C motif YSA_RS19065 PF05736 OprF membrane domain YSA_RS19065 PF00691 OmpA family YSA_RS19070 PF00691 OmpA family YSA_RS19070 PF05736 OprF membrane domain YSA_RS19085 PF06733 DEAD_2 YSA_RS19085 PF13307 Helicase C-terminal domain YSA_RS19090 PF17992 Agarase CBM like domain YSA_RS19090 PF02449 Beta-galactosidase YSA_RS19100 PF04972 BON domain YSA_RS19100 PF00691 OmpA family YSA_RS19105 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YSA_RS19105 PF01243 Pyridoxamine 5'-phosphate oxidase YSA_RS19120 PF06965 Na+/H+ antiporter 1 YSA_RS19135 PF00005 ABC transporter YSA_RS19140 PF00005 ABC transporter YSA_RS19140 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS19145 PF02653 Branched-chain amino acid transport system / permease component YSA_RS19145 PF11862 Domain of unknown function (DUF3382) YSA_RS19150 PF02653 Branched-chain amino acid transport system / permease component YSA_RS19155 PF13458 Periplasmic binding protein YSA_RS19165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YSA_RS19165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YSA_RS19170 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS19170 PF03707 Bacterial signalling protein N terminal repeat YSA_RS19170 PF00563 EAL domain YSA_RS19175 PF12137 RNA polymerase recycling family C-terminal YSA_RS19175 PF18339 RapA N-terminal Tudor like domain 1 YSA_RS19175 PF00271 Helicase conserved C-terminal domain YSA_RS19175 PF18337 RapA N-terminal Tudor like domain YSA_RS19175 PF00176 SNF2 family N-terminal domain YSA_RS19190 PF04632 Fusaric acid resistance protein family YSA_RS19200 PF13533 Biotin-lipoyl like YSA_RS19210 PF13188 PAS domain YSA_RS19210 PF03707 Bacterial signalling protein N terminal repeat YSA_RS19210 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS19210 PF00563 EAL domain YSA_RS19215 PF05230 MASE2 domain YSA_RS19215 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS19220 PF01226 Formate/nitrite transporter YSA_RS19255 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS19255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS19255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS19265 PF00795 Carbon-nitrogen hydrolase YSA_RS19275 PF00710 Asparaginase, N-terminal YSA_RS19275 PF17763 Glutaminase/Asparaginase C-terminal domain YSA_RS19280 PF03695 Uncharacterised protein family (UPF0149) YSA_RS19280 PF02810 SEC-C motif YSA_RS19285 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS19290 PF00970 Oxidoreductase FAD-binding domain YSA_RS19290 PF00175 Oxidoreductase NAD-binding domain YSA_RS19290 PF00042 Globin YSA_RS19295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS19295 PF03466 LysR substrate binding domain YSA_RS19310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YSA_RS19320 PF03480 Bacterial extracellular solute-binding protein, family 7 YSA_RS19325 PF08450 SMP-30/Gluconolactonase/LRE-like region YSA_RS19330 PF01370 NAD dependent epimerase/dehydratase family YSA_RS19340 PF03573 outer membrane porin, OprD family YSA_RS19345 PF04221 RelB antitoxin YSA_RS19355 PF00268 Ribonucleotide reductase, small chain YSA_RS19360 PF02867 Ribonucleotide reductase, barrel domain YSA_RS19360 PF00317 Ribonucleotide reductase, all-alpha domain YSA_RS19360 PF03477 ATP cone domain YSA_RS19365 PF00072 Response regulator receiver domain YSA_RS19365 PF00486 Transcriptional regulatory protein, C terminal YSA_RS19370 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS19370 PF00672 HAMP domain YSA_RS19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS19380 PF01738 Dienelactone hydrolase family YSA_RS19390 PF00486 Transcriptional regulatory protein, C terminal YSA_RS19390 PF00072 Response regulator receiver domain YSA_RS19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS19405 PF00375 Sodium:dicarboxylate symporter family YSA_RS19410 PF01980 tRNA-methyltransferase O YSA_RS19410 PF18389 TrmO C-terminal domain YSA_RS19415 PF07308 Protein of unknown function (DUF1456) YSA_RS19425 PF00958 GMP synthase C terminal domain YSA_RS19425 PF00117 Glutamine amidotransferase class-I YSA_RS19425 PF03352 Methyladenine glycosylase YSA_RS19425 PF13302 Acetyltransferase (GNAT) domain YSA_RS19425 PF13673 Acetyltransferase (GNAT) domain YSA_RS19450 PF00919 Uncharacterized protein family UPF0004 YSA_RS19450 PF04055 Radical SAM superfamily YSA_RS19450 PF18693 TRAM domain YSA_RS19455 PF02705 K+ potassium transporter YSA_RS19465 PF09924 Uncharacterised conserved protein (DUF2156) YSA_RS19465 PF03706 Lysylphosphatidylglycerol synthase TM region YSA_RS19485 PF00817 impB/mucB/samB family YSA_RS19485 PF11798 IMS family HHH motif YSA_RS19495 PF04073 Aminoacyl-tRNA editing domain YSA_RS19495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YSA_RS19495 PF03129 Anticodon binding domain YSA_RS19500 PF03573 outer membrane porin, OprD family YSA_RS19510 PF04102 SlyX YSA_RS19515 PF00313 'Cold-shock' DNA-binding domain YSA_RS19520 PF00210 Ferritin-like domain YSA_RS19525 PF01979 Amidohydrolase family YSA_RS19540 PF01336 OB-fold nucleic acid binding domain YSA_RS19540 PF00152 tRNA synthetases class II (D, K and N) YSA_RS19540 PF02938 GAD domain YSA_RS19545 PF01709 Transcriptional regulator YSA_RS19550 PF02075 Crossover junction endodeoxyribonuclease RuvC YSA_RS19555 PF01330 RuvA N terminal domain YSA_RS19555 PF07499 RuvA, C-terminal domain YSA_RS19560 PF17864 RuvB AAA lid domain YSA_RS19560 PF05491 RuvB C-terminal winged helix domain YSA_RS19560 PF05496 Holliday junction DNA helicase RuvB P-loop domain YSA_RS19565 PF03061 Thioesterase superfamily YSA_RS19570 PF01618 MotA/TolQ/ExbB proton channel family YSA_RS19575 PF02472 Biopolymer transport protein ExbD/TolR YSA_RS19585 PF07676 WD40-like Beta Propeller Repeat YSA_RS19585 PF04052 TolB amino-terminal domain YSA_RS19590 PF00691 OmpA family YSA_RS19595 PF13525 Outer membrane lipoprotein YSA_RS19595 PF16331 TolA binding protein trimerisation YSA_RS19600 PF04055 Radical SAM superfamily YSA_RS19605 PF06508 Queuosine biosynthesis protein QueC YSA_RS19620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS19620 PF00672 HAMP domain YSA_RS19625 PF00324 Amino acid permease YSA_RS19630 PF06097 Bacterial protein of unknown function (DUF945) YSA_RS19635 PF02445 Quinolinate synthetase A protein YSA_RS19640 PF01435 Peptidase family M48 YSA_RS19645 PF01206 Sulfurtransferase TusA YSA_RS19650 PF01594 AI-2E family transporter YSA_RS19655 PF00578 AhpC/TSA family YSA_RS19665 PF00701 Dihydrodipicolinate synthetase family YSA_RS19670 PF06804 NlpB/DapX lipoprotein YSA_RS19675 PF00753 Metallo-beta-lactamase superfamily YSA_RS19680 PF01259 SAICAR synthetase YSA_RS19750 PF01381 Helix-turn-helix YSA_RS19750 PF00717 Peptidase S24-like YSA_RS19805 PF01343 Peptidase family S49 YSA_RS19875 PF17482 Phage tail sheath C-terminal domain YSA_RS19875 PF04984 Phage tail sheath protein subtilisin-like domain YSA_RS19910 PF00182 Chitinase class I YSA_RS19920 PF02086 D12 class N6 adenine-specific DNA methyltransferase YSA_RS20010 PF01810 LysE type translocator YSA_RS20015 PF13978 Protein of unknown function (DUF4223) YSA_RS20020 PF06039 Malate:quinone oxidoreductase (Mqo) YSA_RS20025 PF01022 Bacterial regulatory protein, arsR family YSA_RS20030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS20035 PF01266 FAD dependent oxidoreductase YSA_RS20040 PF00171 Aldehyde dehydrogenase family YSA_RS20045 PF00701 Dihydrodipicolinate synthetase family YSA_RS20050 PF05544 Proline racemase YSA_RS20055 PF13520 Amino acid permease YSA_RS20060 PF12833 Helix-turn-helix domain YSA_RS20065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS20065 PF03466 LysR substrate binding domain YSA_RS20070 PF00994 Probable molybdopterin binding domain YSA_RS20075 PF01062 Bestrophin, RFP-TM, chloride channel YSA_RS20080 PF04055 Radical SAM superfamily YSA_RS20080 PF06463 Molybdenum Cofactor Synthesis C YSA_RS20085 PF00384 Molybdopterin oxidoreductase YSA_RS20085 PF01568 Molydopterin dinucleotide binding domain YSA_RS20090 PF13404 AsnC-type helix-turn-helix domain YSA_RS20090 PF01037 Lrp/AsnC ligand binding domain YSA_RS20095 PF01053 Cys/Met metabolism PLP-dependent enzyme YSA_RS20105 PF08019 Phosphoethanolamine transferase EptA/EptB YSA_RS20105 PF00884 Sulfatase YSA_RS20115 PF01612 3'-5' exonuclease YSA_RS20115 PF00570 HRDC domain YSA_RS20120 PF05166 YcgL domain YSA_RS20125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS20130 PF00881 Nitroreductase family YSA_RS20135 PF03692 Putative zinc- or iron-chelating domain YSA_RS20155 PF01844 HNH endonuclease YSA_RS20165 PF00326 Prolyl oligopeptidase family YSA_RS20165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YSA_RS20180 PF13230 Glutamine amidotransferases class-II YSA_RS20190 PF03466 LysR substrate binding domain YSA_RS20190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS20195 PF07690 Major Facilitator Superfamily YSA_RS20200 PF03746 LamB/YcsF family YSA_RS20205 PF02682 Carboxyltransferase domain, subdomain C and D YSA_RS20210 PF02626 Carboxyltransferase domain, subdomain A and B YSA_RS20230 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS20255 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YSA_RS20280 PF03631 Virulence factor BrkB YSA_RS20285 PF01327 Polypeptide deformylase YSA_RS20305 PF03795 YCII-related domain YSA_RS20315 PF08281 Sigma-70, region 4 YSA_RS20315 PF04542 Sigma-70 region 2 YSA_RS20320 PF01575 MaoC like domain YSA_RS20325 PF12146 Serine aminopeptidase, S33 YSA_RS20330 PF00501 AMP-binding enzyme YSA_RS20330 PF13193 AMP-binding enzyme C-terminal domain YSA_RS20335 PF00501 AMP-binding enzyme YSA_RS20335 PF13193 AMP-binding enzyme C-terminal domain YSA_RS20340 PF01266 FAD dependent oxidoreductase YSA_RS20345 PF00120 Glutamine synthetase, catalytic domain YSA_RS20350 PF04408 Helicase associated domain (HA2) YSA_RS20350 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YSA_RS20350 PF00271 Helicase conserved C-terminal domain YSA_RS20350 PF11898 Domain of unknown function (DUF3418) YSA_RS20350 PF00270 DEAD/DEAH box helicase YSA_RS20355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YSA_RS20355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YSA_RS20370 PF00664 ABC transporter transmembrane region YSA_RS20370 PF00005 ABC transporter YSA_RS20375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YSA_RS20380 PF12697 Alpha/beta hydrolase family YSA_RS20395 PF02525 Flavodoxin-like fold YSA_RS20400 PF00892 EamA-like transporter family YSA_RS20425 PF00924 Mechanosensitive ion channel YSA_RS20430 PF00271 Helicase conserved C-terminal domain YSA_RS20430 PF00270 DEAD/DEAH box helicase YSA_RS20465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS20465 PF03466 LysR substrate binding domain YSA_RS20475 PF00491 Arginase family YSA_RS20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS20480 PF03466 LysR substrate binding domain YSA_RS20485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS20485 PF08447 PAS fold YSA_RS20495 PF02321 Outer membrane efflux protein YSA_RS20500 PF04304 Protein of unknown function (DUF454) YSA_RS20515 PF00270 DEAD/DEAH box helicase YSA_RS20515 PF00271 Helicase conserved C-terminal domain YSA_RS20515 PF09382 RQC domain YSA_RS20515 PF00570 HRDC domain YSA_RS20515 PF16124 RecQ zinc-binding YSA_RS20525 PF01734 Patatin-like phospholipase YSA_RS20540 PF06719 AraC-type transcriptional regulator N-terminus YSA_RS20540 PF12833 Helix-turn-helix domain YSA_RS20555 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YSA_RS20555 PF12833 Helix-turn-helix domain YSA_RS20560 PF02386 Cation transport protein YSA_RS20565 PF00881 Nitroreductase family YSA_RS20570 PF00672 HAMP domain YSA_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS20570 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS20570 PF16750 Sensor domain of 2-component histidine kinase YSA_RS20580 PF00072 Response regulator receiver domain YSA_RS20580 PF00486 Transcriptional regulatory protein, C terminal YSA_RS20590 PF03795 YCII-related domain YSA_RS20595 PF04279 Intracellular septation protein A YSA_RS20600 PF02811 PHP domain YSA_RS20605 PF01300 Telomere recombination YSA_RS20610 PF02616 Segregation and condensation protein ScpA YSA_RS20615 PF04079 Segregation and condensation complex subunit ScpB YSA_RS20620 PF00849 RNA pseudouridylate synthase YSA_RS20620 PF01479 S4 domain YSA_RS20625 PF00324 Amino acid permease YSA_RS20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS20630 PF03466 LysR substrate binding domain YSA_RS20635 PF02913 FAD linked oxidases, C-terminal domain YSA_RS20635 PF01565 FAD binding domain YSA_RS20635 PF13183 4Fe-4S dicluster domain YSA_RS20640 PF07690 Major Facilitator Superfamily YSA_RS20650 PF01329 Pterin 4 alpha carbinolamine dehydratase YSA_RS20655 PF00351 Biopterin-dependent aromatic amino acid hydroxylase YSA_RS20665 PF00158 Sigma-54 interaction domain YSA_RS20665 PF18024 Helix-turn-helix domain YSA_RS20675 PF00501 AMP-binding enzyme YSA_RS20675 PF13193 AMP-binding enzyme C-terminal domain YSA_RS20675 PF16177 Acetyl-coenzyme A synthetase N-terminus YSA_RS20680 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS20685 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS20690 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS20695 PF00005 ABC transporter YSA_RS20700 PF12833 Helix-turn-helix domain YSA_RS20705 PF00202 Aminotransferase class-III YSA_RS20710 PF04958 Arginine N-succinyltransferase beta subunit YSA_RS20715 PF04958 Arginine N-succinyltransferase beta subunit YSA_RS20720 PF00171 Aldehyde dehydrogenase family YSA_RS20725 PF04996 Succinylarginine dihydrolase YSA_RS20735 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YSA_RS20740 PF02272 DHHA1 domain YSA_RS20740 PF01411 tRNA synthetases class II (A) YSA_RS20740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YSA_RS20745 PF13840 ACT domain YSA_RS20745 PF01842 ACT domain YSA_RS20745 PF00696 Amino acid kinase family YSA_RS20750 PF02599 Global regulator protein family YSA_RS20780 PF01769 Divalent cation transporter YSA_RS20780 PF00571 CBS domain YSA_RS20780 PF03448 MgtE intracellular N domain YSA_RS20785 PF03869 Arc-like DNA binding domain YSA_RS20800 PF00324 Amino acid permease YSA_RS20810 PF08448 PAS fold YSA_RS20810 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS20815 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS20815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS20820 PF02817 e3 binding domain YSA_RS20820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YSA_RS20820 PF00364 Biotin-requiring enzyme YSA_RS20825 PF02779 Transketolase, pyrimidine binding domain YSA_RS20825 PF02780 Transketolase, C-terminal domain YSA_RS20830 PF00676 Dehydrogenase E1 component YSA_RS20830 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal YSA_RS20835 PF01037 Lrp/AsnC ligand binding domain YSA_RS20840 PF00120 Glutamine synthetase, catalytic domain YSA_RS20845 PF07690 Major Facilitator Superfamily YSA_RS20850 PF07317 Flagellar regulator YcgR YSA_RS20850 PF07238 PilZ domain YSA_RS20870 PF00072 Response regulator receiver domain YSA_RS20870 PF01584 CheW-like domain YSA_RS20875 PF03705 CheR methyltransferase, all-alpha domain YSA_RS20875 PF01739 CheR methyltransferase, SAM binding domain YSA_RS20880 PF00460 Flagella basal body rod protein YSA_RS20885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YSA_RS20885 PF00460 Flagella basal body rod protein YSA_RS20890 PF13861 FlgD Tudor-like domain YSA_RS20890 PF13860 FlgD Ig-like domain YSA_RS20890 PF03963 Flagellar hook capping protein - N-terminal region YSA_RS20895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YSA_RS20895 PF00460 Flagella basal body rod protein YSA_RS20895 PF07559 Flagellar basal body protein FlaE YSA_RS20905 PF00460 Flagella basal body rod protein YSA_RS20905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YSA_RS20910 PF00460 Flagella basal body rod protein YSA_RS20910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YSA_RS20915 PF02107 Flagellar L-ring protein YSA_RS20920 PF02119 Flagellar P-ring protein YSA_RS20925 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YSA_RS20925 PF10135 Rod binding protein YSA_RS20930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YSA_RS20930 PF00460 Flagella basal body rod protein YSA_RS20945 PF00535 Glycosyl transferase family 2 YSA_RS20945 PF00534 Glycosyl transferases group 1 YSA_RS20950 PF00483 Nucleotidyl transferase YSA_RS20955 PF16363 GDP-mannose 4,6 dehydratase YSA_RS20960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YSA_RS20965 PF00535 Glycosyl transferase family 2 YSA_RS20970 PF08666 SAF domain YSA_RS20970 PF03102 NeuB family YSA_RS20975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS20975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS20975 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS20980 PF05050 Methyltransferase FkbM domain YSA_RS20985 PF16363 GDP-mannose 4,6 dehydratase YSA_RS20995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YSA_RS20995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YSA_RS21000 PF00669 Bacterial flagellin N-terminal helical region YSA_RS21000 PF00700 Bacterial flagellin C-terminal helical region YSA_RS21000 PF07196 Flagellin hook IN motif YSA_RS21010 PF07196 Flagellin hook IN motif YSA_RS21010 PF02465 Flagellar hook-associated protein 2 N-terminus YSA_RS21010 PF07195 Flagellar hook-associated protein 2 C-terminus YSA_RS21015 PF02561 Flagellar protein FliS YSA_RS21025 PF02954 Bacterial regulatory protein, Fis family YSA_RS21025 PF06490 Flagellar regulatory protein FleQ YSA_RS21025 PF00158 Sigma-54 interaction domain YSA_RS21030 PF13188 PAS domain YSA_RS21030 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS21035 PF02954 Bacterial regulatory protein, Fis family YSA_RS21035 PF00072 Response regulator receiver domain YSA_RS21035 PF00158 Sigma-54 interaction domain YSA_RS21040 PF02049 Flagellar hook-basal body complex protein FliE YSA_RS21045 PF08345 Flagellar M-ring protein C-terminal YSA_RS21045 PF01514 Secretory protein of YscJ/FliF family YSA_RS21050 PF01706 FliG C-terminal domain YSA_RS21050 PF14842 FliG N-terminal domain YSA_RS21050 PF14841 FliG middle domain YSA_RS21060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YSA_RS21060 PF18269 T3SS EscN ATPase C-terminal domain YSA_RS21065 PF02050 Flagellar FliJ protein YSA_RS21075 PF13466 STAS domain YSA_RS21080 PF00486 Transcriptional regulatory protein, C terminal YSA_RS21080 PF00072 Response regulator receiver domain YSA_RS21100 PF02154 Flagellar motor switch protein FliM YSA_RS21100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YSA_RS21105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YSA_RS21110 PF04347 Flagellar biosynthesis protein, FliO YSA_RS21115 PF00813 FliP family YSA_RS21120 PF01313 Bacterial export proteins, family 3 YSA_RS21125 PF01311 Bacterial export proteins, family 1 YSA_RS21130 PF01312 FlhB HrpN YscU SpaS Family YSA_RS21145 PF00266 Aminotransferase class-V YSA_RS21165 PF07478 D-ala D-ala ligase C-terminus YSA_RS21165 PF01820 D-ala D-ala ligase N-terminus YSA_RS21170 PF07729 FCD domain YSA_RS21170 PF00392 Bacterial regulatory proteins, gntR family YSA_RS21175 PF00771 FHIPEP family YSA_RS21180 PF00448 SRP54-type protein, GTPase domain YSA_RS21185 PF10609 NUBPL iron-transfer P-loop NTPase YSA_RS21190 PF04542 Sigma-70 region 2 YSA_RS21190 PF04539 Sigma-70 region 3 YSA_RS21190 PF04545 Sigma-70, region 4 YSA_RS21195 PF00072 Response regulator receiver domain YSA_RS21200 PF04344 Chemotaxis phosphatase, CheZ YSA_RS21205 PF01584 CheW-like domain YSA_RS21205 PF02895 Signal transducing histidine kinase, homodimeric domain YSA_RS21205 PF01627 Hpt domain YSA_RS21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS21205 PF00072 Response regulator receiver domain YSA_RS21210 PF00072 Response regulator receiver domain YSA_RS21210 PF01339 CheB methylesterase YSA_RS21215 PF01618 MotA/TolQ/ExbB proton channel family YSA_RS21220 PF00691 OmpA family YSA_RS21220 PF13677 Membrane MotB of proton-channel complex MotA/MotB YSA_RS21225 PF13614 AAA domain YSA_RS21235 PF01584 CheW-like domain YSA_RS21250 PF01312 FlhB HrpN YscU SpaS Family YSA_RS21260 PF00005 ABC transporter YSA_RS21265 PF03379 CcmB protein YSA_RS21270 PF01578 Cytochrome C assembly protein YSA_RS21275 PF04995 Heme exporter protein D (CcmD) YSA_RS21280 PF03100 CcmE YSA_RS21285 PF01578 Cytochrome C assembly protein YSA_RS21285 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YSA_RS21290 PF08534 Redoxin YSA_RS21295 PF03918 Cytochrome C biogenesis protein YSA_RS21315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS21315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS21320 PF02567 Phenazine biosynthesis-like protein YSA_RS21330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YSA_RS21340 PF01266 FAD dependent oxidoreductase YSA_RS21345 PF01177 Asp/Glu/Hydantoin racemase YSA_RS21350 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YSA_RS21355 PF01037 Lrp/AsnC ligand binding domain YSA_RS21365 PF10672 S-adenosylmethionine-dependent methyltransferase YSA_RS21365 PF02926 THUMP domain YSA_RS21365 PF01170 Putative RNA methylase family UPF0020 YSA_RS21380 PF07690 Major Facilitator Superfamily YSA_RS21395 PF00520 Ion transport protein YSA_RS21395 PF00027 Cyclic nucleotide-binding domain YSA_RS21405 PF00224 Pyruvate kinase, barrel domain YSA_RS21405 PF02887 Pyruvate kinase, alpha/beta domain YSA_RS21410 PF05161 MOFRL family YSA_RS21410 PF13660 Domain of unknown function (DUF4147) YSA_RS21415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YSA_RS21415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YSA_RS21425 PF01261 Xylose isomerase-like TIM barrel YSA_RS21430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS21430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS21430 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS21435 PF03928 Haem-degrading YSA_RS21440 PF00440 Bacterial regulatory proteins, tetR family YSA_RS21440 PF08360 QacR-like protein, C-terminal region YSA_RS21445 PF05661 Protein of unknown function (DUF808) YSA_RS21460 PF00860 Permease family YSA_RS21470 PF04115 Ureidoglycolate lyase YSA_RS21475 PF09349 OHCU decarboxylase YSA_RS21475 PF01014 Uricase YSA_RS21485 PF00576 HIUase/Transthyretin family YSA_RS21495 PF00860 Permease family YSA_RS21505 PF00230 Major intrinsic protein YSA_RS21510 PF01979 Amidohydrolase family YSA_RS21520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YSA_RS21520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YSA_RS21525 PF01799 [2Fe-2S] binding domain YSA_RS21525 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS21535 PF02463 RecF/RecN/SMC N terminal domain YSA_RS21540 PF04354 ZipA, C-terminal FtsZ-binding domain YSA_RS21545 PF01653 NAD-dependent DNA ligase adenylation domain YSA_RS21545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YSA_RS21545 PF00533 BRCA1 C Terminus (BRCT) domain YSA_RS21545 PF03120 NAD-dependent DNA ligase OB-fold domain YSA_RS21545 PF12826 Helix-hairpin-helix motif YSA_RS21555 PF09278 MerR, DNA binding YSA_RS21555 PF00376 MerR family regulatory protein YSA_RS21575 PF12169 DNA polymerase III subunits gamma and tau domain III YSA_RS21575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YSA_RS21575 PF12170 DNA polymerase III tau subunit V interacting with alpha YSA_RS21580 PF02575 YbaB/EbfC DNA-binding family YSA_RS21590 PF02132 RecR protein YSA_RS21590 PF13662 Toprim domain YSA_RS21595 PF00156 Phosphoribosyl transferase domain YSA_RS21600 PF00027 Cyclic nucleotide-binding domain YSA_RS21600 PF13545 Crp-like helix-turn-helix domain YSA_RS21605 PF04055 Radical SAM superfamily YSA_RS21605 PF06969 HemN C-terminal domain YSA_RS21620 PF00403 Heavy-metal-associated domain YSA_RS21630 PF12801 4Fe-4S binding domain YSA_RS21630 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase YSA_RS21630 PF13746 4Fe-4S dicluster domain YSA_RS21635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS21635 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP YSA_RS21650 PF00115 Cytochrome C and Quinol oxidase polypeptide I YSA_RS21660 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP YSA_RS21660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS21675 PF00115 Cytochrome C and Quinol oxidase polypeptide I YSA_RS21685 PF06865 Pyrimidine/purine nucleoside phosphorylase YSA_RS21705 PF00501 AMP-binding enzyme YSA_RS21705 PF13193 AMP-binding enzyme C-terminal domain YSA_RS21705 PF00501 AMP-binding enzyme YSA_RS21705 PF00550 Phosphopantetheine attachment site YSA_RS21705 PF13193 AMP-binding enzyme C-terminal domain YSA_RS21705 PF00668 Condensation domain YSA_RS21705 PF00668 Condensation domain YSA_RS21705 PF00550 Phosphopantetheine attachment site YSA_RS21710 PF00005 ABC transporter YSA_RS21725 PF13098 Thioredoxin-like domain YSA_RS21730 PF00578 AhpC/TSA family YSA_RS21735 PF02683 Cytochrome C biogenesis protein transmembrane region YSA_RS21735 PF11412 Disulphide bond corrector protein DsbC YSA_RS21750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YSA_RS21755 PF01799 [2Fe-2S] binding domain YSA_RS21755 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS21760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS21760 PF00034 Cytochrome c YSA_RS21765 PF13478 XdhC Rossmann domain YSA_RS21765 PF02625 XdhC and CoxI family YSA_RS21770 PF12804 MobA-like NTP transferase domain YSA_RS21810 PF00486 Transcriptional regulatory protein, C terminal YSA_RS21810 PF00072 Response regulator receiver domain YSA_RS21815 PF08521 Two-component sensor kinase N-terminal YSA_RS21815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS21815 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS21820 PF00202 Aminotransferase class-III YSA_RS21830 PF00266 Aminotransferase class-V YSA_RS21855 PF00083 Sugar (and other) transporter YSA_RS21860 PF15723 Motility quorum-sensing regulator, toxin of MqsA YSA_RS21865 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA YSA_RS21875 PF01012 Electron transfer flavoprotein domain YSA_RS21880 PF00766 Electron transfer flavoprotein FAD-binding domain YSA_RS21880 PF01012 Electron transfer flavoprotein domain YSA_RS21895 PF00691 OmpA family YSA_RS21895 PF13488 Glycine zipper YSA_RS21900 PF00392 Bacterial regulatory proteins, gntR family YSA_RS21900 PF00155 Aminotransferase class I and II YSA_RS21910 PF03692 Putative zinc- or iron-chelating domain YSA_RS21915 PF01852 START domain YSA_RS21920 PF00285 Citrate synthase, C-terminal domain YSA_RS21925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YSA_RS21930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YSA_RS21935 PF02910 Fumarate reductase flavoprotein C-term YSA_RS21935 PF00890 FAD binding domain YSA_RS21940 PF13085 2Fe-2S iron-sulfur cluster binding domain YSA_RS21945 PF16870 2-oxoglutarate dehydrogenase C-terminal YSA_RS21945 PF00676 Dehydrogenase E1 component YSA_RS21945 PF16078 2-oxoglutarate dehydrogenase N-terminus YSA_RS21945 PF02779 Transketolase, pyrimidine binding domain YSA_RS21950 PF00364 Biotin-requiring enzyme YSA_RS21950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YSA_RS21950 PF02817 e3 binding domain YSA_RS21955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS21955 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS21960 PF00549 CoA-ligase YSA_RS21960 PF08442 ATP-grasp domain YSA_RS21965 PF00549 CoA-ligase YSA_RS21965 PF02629 CoA binding domain YSA_RS21970 PF05525 Branched-chain amino acid transport protein YSA_RS21995 PF00668 Condensation domain YSA_RS21995 PF13193 AMP-binding enzyme C-terminal domain YSA_RS21995 PF00501 AMP-binding enzyme YSA_RS21995 PF00550 Phosphopantetheine attachment site YSA_RS22000 PF00550 Phosphopantetheine attachment site YSA_RS22000 PF13193 AMP-binding enzyme C-terminal domain YSA_RS22000 PF00668 Condensation domain YSA_RS22000 PF00501 AMP-binding enzyme YSA_RS22005 PF00550 Phosphopantetheine attachment site YSA_RS22005 PF00668 Condensation domain YSA_RS22005 PF13193 AMP-binding enzyme C-terminal domain YSA_RS22005 PF00501 AMP-binding enzyme YSA_RS22010 PF07660 Secretin and TonB N terminus short domain YSA_RS22010 PF00593 TonB dependent receptor YSA_RS22010 PF07715 TonB-dependent Receptor Plug Domain YSA_RS22020 PF00668 Condensation domain YSA_RS22020 PF00550 Phosphopantetheine attachment site YSA_RS22020 PF00975 Thioesterase domain YSA_RS22020 PF00501 AMP-binding enzyme YSA_RS22020 PF13193 AMP-binding enzyme C-terminal domain YSA_RS22025 PF00664 ABC transporter transmembrane region YSA_RS22025 PF00005 ABC transporter YSA_RS22035 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YSA_RS22035 PF02321 Outer membrane efflux protein YSA_RS22040 PF02687 FtsX-like permease family YSA_RS22040 PF12704 MacB-like periplasmic core domain YSA_RS22040 PF00005 ABC transporter YSA_RS22045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS22065 PF00183 Hsp90 protein YSA_RS22065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS22075 PF02678 Pirin YSA_RS22075 PF05726 Pirin C-terminal cupin domain YSA_RS22085 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS22085 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS22090 PF07977 FabA-like domain YSA_RS22095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS22095 PF00072 Response regulator receiver domain YSA_RS22095 PF01627 Hpt domain YSA_RS22095 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS22095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS22095 PF00672 HAMP domain YSA_RS22105 PF07715 TonB-dependent Receptor Plug Domain YSA_RS22105 PF00593 TonB dependent receptor YSA_RS22110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YSA_RS22110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YSA_RS22145 PF01594 AI-2E family transporter YSA_RS22155 PF03814 Potassium-transporting ATPase A subunit YSA_RS22165 PF02669 K+-transporting ATPase, c chain YSA_RS22170 PF02702 Osmosensitive K+ channel His kinase sensor domain YSA_RS22170 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS22170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS22170 PF13492 GAF domain YSA_RS22170 PF13493 Domain of unknown function (DUF4118) YSA_RS22175 PF00072 Response regulator receiver domain YSA_RS22175 PF00486 Transcriptional regulatory protein, C terminal YSA_RS22180 PF03466 LysR substrate binding domain YSA_RS22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS22185 PF00202 Aminotransferase class-III YSA_RS22190 PF00593 TonB dependent receptor YSA_RS22190 PF07715 TonB-dependent Receptor Plug Domain YSA_RS22195 PF00005 ABC transporter YSA_RS22195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YSA_RS22200 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS22200 PF12911 N-terminal TM domain of oligopeptide transport permease C YSA_RS22205 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS22210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS22215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS22220 PF01464 Transglycosylase SLT domain YSA_RS22220 PF01476 LysM domain YSA_RS22225 PF00753 Metallo-beta-lactamase superfamily YSA_RS22225 PF16123 Hydroxyacylglutathione hydrolase C-terminus YSA_RS22235 PF00075 RNase H YSA_RS22240 PF00929 Exonuclease YSA_RS22245 PF01276 Orn/Lys/Arg decarboxylase, major domain YSA_RS22245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YSA_RS22245 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YSA_RS22255 PF03358 NADPH-dependent FMN reductase YSA_RS22290 PF00361 Proton-conducting membrane transporter YSA_RS22295 PF00361 Proton-conducting membrane transporter YSA_RS22300 PF00361 Proton-conducting membrane transporter YSA_RS22300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YSA_RS22305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YSA_RS22310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YSA_RS22315 PF12838 4Fe-4S dicluster domain YSA_RS22320 PF00146 NADH dehydrogenase YSA_RS22325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YSA_RS22325 PF00384 Molybdopterin oxidoreductase YSA_RS22325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YSA_RS22330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YSA_RS22330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YSA_RS22340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YSA_RS22340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YSA_RS22345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YSA_RS22350 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YSA_RS22355 PF07947 YhhN family YSA_RS22365 PF00463 Isocitrate lyase family YSA_RS22385 PF00916 Sulfate permease family YSA_RS22385 PF01740 STAS domain YSA_RS22390 PF00679 Elongation factor G C-terminus YSA_RS22390 PF00009 Elongation factor Tu GTP binding domain YSA_RS22390 PF14492 Elongation Factor G, domain II YSA_RS22390 PF03144 Elongation factor Tu domain 2 YSA_RS22390 PF03764 Elongation factor G, domain IV YSA_RS22405 PF00202 Aminotransferase class-III YSA_RS22410 PF03466 LysR substrate binding domain YSA_RS22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS22415 PF00324 Amino acid permease YSA_RS22420 PF01008 Initiation factor 2 subunit family YSA_RS22420 PF03061 Thioesterase superfamily YSA_RS22425 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS22425 PF00043 Glutathione S-transferase, C-terminal domain YSA_RS22435 PF01384 Phosphate transporter family YSA_RS22440 PF04343 Protein of unknown function, DUF488 YSA_RS22445 PF01047 MarR family YSA_RS22445 PF00583 Acetyltransferase (GNAT) family YSA_RS22455 PF00196 Bacterial regulatory proteins, luxR family YSA_RS22455 PF00072 Response regulator receiver domain YSA_RS22460 PF02151 UvrB/uvrC motif YSA_RS22460 PF01541 GIY-YIG catalytic domain YSA_RS22460 PF08459 UvrC Helix-hairpin-helix N-terminal YSA_RS22465 PF01066 CDP-alcohol phosphatidyltransferase YSA_RS22495 PF01381 Helix-turn-helix YSA_RS22495 PF00717 Peptidase S24-like YSA_RS22500 PF00717 Peptidase S24-like YSA_RS22505 PF02785 Biotin carboxylase C-terminal domain YSA_RS22505 PF00289 Biotin carboxylase, N-terminal domain YSA_RS22505 PF00364 Biotin-requiring enzyme YSA_RS22505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YSA_RS22515 PF01039 Carboxyl transferase domain YSA_RS22520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS22520 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS22520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS22530 PF00501 AMP-binding enzyme YSA_RS22530 PF13193 AMP-binding enzyme C-terminal domain YSA_RS22535 PF00128 Alpha amylase, catalytic domain YSA_RS22535 PF11896 Domain of unknown function (DUF3416) YSA_RS22540 PF00128 Alpha amylase, catalytic domain YSA_RS22540 PF16657 Maltogenic Amylase, C-terminal domain YSA_RS22545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YSA_RS22545 PF02806 Alpha amylase, C-terminal all-beta domain YSA_RS22545 PF00128 Alpha amylase, catalytic domain YSA_RS22555 PF03372 Endonuclease/Exonuclease/phosphatase family YSA_RS22560 PF00128 Alpha amylase, catalytic domain YSA_RS22560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YSA_RS22570 PF00128 Alpha amylase, catalytic domain YSA_RS22575 PF02446 4-alpha-glucanotransferase YSA_RS22580 PF00128 Alpha amylase, catalytic domain YSA_RS22580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YSA_RS22580 PF11941 Domain of unknown function (DUF3459) YSA_RS22585 PF00534 Glycosyl transferases group 1 YSA_RS22585 PF08323 Starch synthase catalytic domain YSA_RS22590 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YSA_RS22590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YSA_RS22595 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YSA_RS22595 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YSA_RS22600 PF00723 Glycosyl hydrolases family 15 YSA_RS22610 PF08362 YcdC-like protein, C-terminal region YSA_RS22610 PF00440 Bacterial regulatory proteins, tetR family YSA_RS22615 PF01180 Dihydroorotate dehydrogenase YSA_RS22620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YSA_RS22620 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS22625 PF01979 Amidohydrolase family YSA_RS22630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YSA_RS22635 PF07687 Peptidase dimerisation domain YSA_RS22635 PF01546 Peptidase family M20/M25/M40 YSA_RS22640 PF00753 Metallo-beta-lactamase superfamily YSA_RS22645 PF08212 Lipocalin-like domain YSA_RS22650 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YSA_RS22655 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS22660 PF09297 NADH pyrophosphatase zinc ribbon domain YSA_RS22660 PF00293 NUDIX domain YSA_RS22660 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain YSA_RS22665 PF01925 Sulfite exporter TauE/SafE YSA_RS22680 PF00561 alpha/beta hydrolase fold YSA_RS22685 PF01266 FAD dependent oxidoreductase YSA_RS22690 PF01131 DNA topoisomerase YSA_RS22690 PF01751 Toprim domain YSA_RS22695 PF13673 Acetyltransferase (GNAT) domain YSA_RS22700 PF08007 Cupin superfamily protein YSA_RS22705 PF08328 Adenylosuccinate lyase C-terminal YSA_RS22705 PF00206 Lyase YSA_RS22710 PF04356 Protein of unknown function (DUF489) YSA_RS22720 PF00293 NUDIX domain YSA_RS22725 PF03971 Monomeric isocitrate dehydrogenase YSA_RS22730 PF00180 Isocitrate/isopropylmalate dehydrogenase YSA_RS22735 PF00313 'Cold-shock' DNA-binding domain YSA_RS22740 PF02617 ATP-dependent Clp protease adaptor protein ClpS YSA_RS22745 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS22745 PF17871 AAA lid domain YSA_RS22745 PF10431 C-terminal, D2-small domain, of ClpB protein YSA_RS22745 PF02861 Clp amino terminal domain, pathogenicity island component YSA_RS22745 PF07724 AAA domain (Cdc48 subfamily) YSA_RS22750 PF01176 Translation initiation factor 1A / IF-1 YSA_RS22755 PF04377 Arginine-tRNA-protein transferase, C terminus YSA_RS22755 PF04376 Arginine-tRNA-protein transferase, N terminus YSA_RS22760 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YSA_RS22765 PF09397 Ftsk gamma domain YSA_RS22765 PF17854 FtsK alpha domain YSA_RS22765 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YSA_RS22765 PF01580 FtsK/SpoIIIE family YSA_RS22770 PF03548 Outer membrane lipoprotein carrier protein LolA YSA_RS22775 PF16193 AAA C-terminal domain YSA_RS22775 PF12002 MgsA AAA+ ATPase C terminal YSA_RS22775 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS22780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YSA_RS22785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YSA_RS22785 PF02403 Seryl-tRNA synthetase N-terminal domain YSA_RS22790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS22790 PF14824 Sirohaem biosynthesis protein central YSA_RS22790 PF10414 Sirohaem synthase dimerisation region YSA_RS22795 PF13409 Glutathione S-transferase, N-terminal domain YSA_RS22800 PF00591 Glycosyl transferase family, a/b domain YSA_RS22800 PF02885 Glycosyl transferase family, helical bundle domain YSA_RS22805 PF04358 DsrC like protein YSA_RS22815 PF02635 DsrE/DsrF-like family YSA_RS22820 PF02635 DsrE/DsrF-like family YSA_RS22825 PF00860 Permease family YSA_RS22830 PF01027 Inhibitor of apoptosis-promoting Bax1 YSA_RS22845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS22845 PF03466 LysR substrate binding domain YSA_RS22850 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain YSA_RS22850 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain YSA_RS22855 PF17042 Nucleotide-binding C-terminal domain YSA_RS22855 PF07005 Sugar-binding N-terminal domain YSA_RS22860 PF07690 Major Facilitator Superfamily YSA_RS22860 PF00083 Sugar (and other) transporter YSA_RS22865 PF02887 Pyruvate kinase, alpha/beta domain YSA_RS22865 PF00224 Pyruvate kinase, barrel domain YSA_RS22870 PF03952 Enolase, N-terminal domain YSA_RS22870 PF00113 Enolase, C-terminal TIM barrel domain YSA_RS22875 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YSA_RS22875 PF01676 Metalloenzyme superfamily YSA_RS22895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS22895 PF03466 LysR substrate binding domain YSA_RS22915 PF07833 Copper amine oxidase N-terminal domain YSA_RS22915 PF01179 Copper amine oxidase, enzyme domain YSA_RS22915 PF02728 Copper amine oxidase, N3 domain YSA_RS22915 PF02727 Copper amine oxidase, N2 domain YSA_RS22920 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS22920 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS22925 PF07969 Amidohydrolase family YSA_RS22935 PF12833 Helix-turn-helix domain YSA_RS22945 PF00248 Aldo/keto reductase family YSA_RS23035 PF00440 Bacterial regulatory proteins, tetR family YSA_RS23040 PF00654 Voltage gated chloride channel YSA_RS23045 PF06965 Na+/H+ antiporter 1 YSA_RS23050 PF02386 Cation transport protein YSA_RS23055 PF01144 Coenzyme A transferase YSA_RS23060 PF01144 Coenzyme A transferase YSA_RS23065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS23065 PF00672 HAMP domain YSA_RS23065 PF02743 Cache domain YSA_RS23075 PF08450 SMP-30/Gluconolactonase/LRE-like region YSA_RS23080 PF01370 NAD dependent epimerase/dehydratase family YSA_RS23085 PF06178 Oligogalacturonate-specific porin protein (KdgM) YSA_RS23090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YSA_RS23090 PF13378 Enolase C-terminal domain-like YSA_RS23095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS23100 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS23105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS23110 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS23110 PF12911 N-terminal TM domain of oligopeptide transport permease C YSA_RS23115 PF00005 ABC transporter YSA_RS23115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YSA_RS23120 PF00005 ABC transporter YSA_RS23120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YSA_RS23125 PF00295 Glycosyl hydrolases family 28 YSA_RS23135 PF00392 Bacterial regulatory proteins, gntR family YSA_RS23150 PF00440 Bacterial regulatory proteins, tetR family YSA_RS23150 PF17938 Tetracyclin repressor-like, C-terminal domain YSA_RS23155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YSA_RS23155 PF00034 Cytochrome c YSA_RS23155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS23160 PF01799 [2Fe-2S] binding domain YSA_RS23160 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS23170 PF12802 MarR family YSA_RS23180 PF01494 FAD binding domain YSA_RS23185 PF00561 alpha/beta hydrolase fold YSA_RS23190 PF17645 Arylmalonate decarboxylase YSA_RS23195 PF00857 Isochorismatase family YSA_RS23200 PF07690 Major Facilitator Superfamily YSA_RS23205 PF03573 outer membrane porin, OprD family YSA_RS23225 PF01925 Sulfite exporter TauE/SafE YSA_RS23230 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS23235 PF03600 Citrate transporter YSA_RS23235 PF02080 TrkA-C domain YSA_RS23260 PF08241 Methyltransferase domain YSA_RS23285 PF01343 Peptidase family S49 YSA_RS23285 PF08496 Peptidase family S49 N-terminal YSA_RS23365 PF10065 Uncharacterized conserved protein (DUF2303) YSA_RS23385 PF00196 Bacterial regulatory proteins, luxR family YSA_RS23400 PF01527 Transposase YSA_RS23410 PF13817 IS66 C-terminal element YSA_RS23410 PF13005 zinc-finger binding domain of transposase IS66 YSA_RS23410 PF03050 Transposase IS66 family YSA_RS23410 PF13007 Transposase C of IS166 homeodomain YSA_RS23455 PF03796 DnaB-like helicase C terminal domain YSA_RS23455 PF00772 DnaB-like helicase N terminal domain YSA_RS23465 PF07102 Protein of unknown function (DUF1364) YSA_RS23495 PF09411 Lipid A 3-O-deacylase (PagL) YSA_RS23535 PF04860 Phage portal protein YSA_RS23540 PF00574 Clp protease YSA_RS23655 PF01757 Acyltransferase family YSA_RS23680 PF00589 Phage integrase family YSA_RS23680 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS23785 PF08338 Domain of unknown function (DUF1731) YSA_RS23785 PF01370 NAD dependent epimerase/dehydratase family YSA_RS23805 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS23805 PF00107 Zinc-binding dehydrogenase YSA_RS23815 PF07681 DoxX YSA_RS23825 PF13426 PAS domain YSA_RS23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS23825 PF00072 Response regulator receiver domain YSA_RS23830 PF06745 KaiC YSA_RS23835 PF00072 Response regulator receiver domain YSA_RS23835 PF00486 Transcriptional regulatory protein, C terminal YSA_RS23840 PF02599 Global regulator protein family YSA_RS23850 PF00005 ABC transporter YSA_RS23850 PF03459 TOBE domain YSA_RS23855 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS23865 PF03060 Nitronate monooxygenase YSA_RS23880 PF00034 Cytochrome c YSA_RS23885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS23890 PF00483 Nucleotidyl transferase YSA_RS23895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YSA_RS23895 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS23905 PF00005 ABC transporter YSA_RS23905 PF08402 TOBE domain YSA_RS23910 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS23915 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS23925 PF00925 GTP cyclohydrolase II YSA_RS23925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YSA_RS23935 PF07859 alpha/beta hydrolase fold YSA_RS23940 PF03466 LysR substrate binding domain YSA_RS23940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS23950 PF03621 MbtH-like protein YSA_RS23955 PF00975 Thioesterase domain YSA_RS23965 PF07759 Protein of unknown function (DUF1615) YSA_RS23985 PF00005 ABC transporter YSA_RS24015 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YSA_RS24025 PF00768 D-alanyl-D-alanine carboxypeptidase YSA_RS24035 PF00589 Phage integrase family YSA_RS24035 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS24060 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS24060 PF13192 Thioredoxin domain YSA_RS24065 PF16859 Tetracyclin repressor-like, C-terminal domain YSA_RS24065 PF00440 Bacterial regulatory proteins, tetR family YSA_RS24105 PF08501 Shikimate dehydrogenase substrate binding domain YSA_RS24115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS24125 PF03573 outer membrane porin, OprD family YSA_RS24130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS24135 PF00072 Response regulator receiver domain YSA_RS24135 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24135 PF08448 PAS fold YSA_RS24135 PF13188 PAS domain YSA_RS24140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24140 PF00072 Response regulator receiver domain YSA_RS24140 PF01627 Hpt domain YSA_RS24140 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24145 PF01739 CheR methyltransferase, SAM binding domain YSA_RS24145 PF03705 CheR methyltransferase, all-alpha domain YSA_RS24150 PF01339 CheB methylesterase YSA_RS24155 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24155 PF09456 RcsC Alpha-Beta-Loop (ABL) YSA_RS24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24155 PF00072 Response regulator receiver domain YSA_RS24160 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24160 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS24160 PF00072 Response regulator receiver domain YSA_RS24170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YSA_RS24170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YSA_RS24175 PF00108 Thiolase, N-terminal domain YSA_RS24175 PF02803 Thiolase, C-terminal domain YSA_RS24185 PF02627 Carboxymuconolactone decarboxylase family YSA_RS24190 PF07690 Major Facilitator Superfamily YSA_RS24195 PF00392 Bacterial regulatory proteins, gntR family YSA_RS24195 PF00155 Aminotransferase class I and II YSA_RS24205 PF03928 Haem-degrading YSA_RS24210 PF02754 Cysteine-rich domain YSA_RS24210 PF13183 4Fe-4S dicluster domain YSA_RS24215 PF01565 FAD binding domain YSA_RS24220 PF02913 FAD linked oxidases, C-terminal domain YSA_RS24220 PF01565 FAD binding domain YSA_RS24225 PF07729 FCD domain YSA_RS24225 PF00392 Bacterial regulatory proteins, gntR family YSA_RS24240 PF03717 Penicillin-binding Protein dimerisation domain YSA_RS24240 PF00905 Penicillin binding protein transpeptidase domain YSA_RS24245 PF07690 Major Facilitator Superfamily YSA_RS24250 PF03573 outer membrane porin, OprD family YSA_RS24265 PF00175 Oxidoreductase NAD-binding domain YSA_RS24265 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS24270 PF00355 Rieske [2Fe-2S] domain YSA_RS24275 PF00005 ABC transporter YSA_RS24280 PF12704 MacB-like periplasmic core domain YSA_RS24280 PF02687 FtsX-like permease family YSA_RS24290 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS24295 PF00440 Bacterial regulatory proteins, tetR family YSA_RS24295 PF13977 BetI-type transcriptional repressor, C-terminal YSA_RS24300 PF00072 Response regulator receiver domain YSA_RS24300 PF00486 Transcriptional regulatory protein, C terminal YSA_RS24310 PF17149 Periplasmic sensor domain found in signal transduction proteins YSA_RS24310 PF00072 Response regulator receiver domain YSA_RS24310 PF01627 Hpt domain YSA_RS24310 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24310 PF00672 HAMP domain YSA_RS24315 PF00324 Amino acid permease YSA_RS24320 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS24325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS24325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS24325 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS24335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS24335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS24335 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS24340 PF00842 Alanine racemase, C-terminal domain YSA_RS24340 PF01168 Alanine racemase, N-terminal domain YSA_RS24345 PF00155 Aminotransferase class I and II YSA_RS24350 PF00171 Aldehyde dehydrogenase family YSA_RS24355 PF02525 Flavodoxin-like fold YSA_RS24360 PF13416 Bacterial extracellular solute-binding protein YSA_RS24365 PF00202 Aminotransferase class-III YSA_RS24370 PF00196 Bacterial regulatory proteins, luxR family YSA_RS24370 PF00072 Response regulator receiver domain YSA_RS24375 PF04346 Ethanolamine utilisation protein, EutH YSA_RS24380 PF00196 Bacterial regulatory proteins, luxR family YSA_RS24380 PF00072 Response regulator receiver domain YSA_RS24385 PF01565 FAD binding domain YSA_RS24385 PF04030 D-arabinono-1,4-lactone oxidase YSA_RS24400 PF03466 LysR substrate binding domain YSA_RS24400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24405 PF13378 Enolase C-terminal domain-like YSA_RS24405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YSA_RS24410 PF02426 Muconolactone delta-isomerase YSA_RS24415 PF04444 Catechol dioxygenase N terminus YSA_RS24415 PF00775 Dioxygenase YSA_RS24425 PF00563 EAL domain YSA_RS24425 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS24425 PF08447 PAS fold YSA_RS24425 PF08448 PAS fold YSA_RS24430 PF00248 Aldo/keto reductase family YSA_RS24440 PF03466 LysR substrate binding domain YSA_RS24440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24445 PF00141 Peroxidase YSA_RS24450 PF01321 Creatinase/Prolidase N-terminal domain YSA_RS24450 PF00557 Metallopeptidase family M24 YSA_RS24455 PF08946 Osmosensory transporter coiled coil YSA_RS24455 PF00083 Sugar (and other) transporter YSA_RS24460 PF01965 DJ-1/PfpI family YSA_RS24460 PF12833 Helix-turn-helix domain YSA_RS24465 PF13091 PLD-like domain YSA_RS24470 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS24470 PF13188 PAS domain YSA_RS24470 PF03707 Bacterial signalling protein N terminal repeat YSA_RS24470 PF00563 EAL domain YSA_RS24475 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YSA_RS24475 PF11892 Domain of unknown function (DUF3412) YSA_RS24475 PF03641 Possible lysine decarboxylase YSA_RS24480 PF03601 Conserved hypothetical protein 698 YSA_RS24485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24485 PF03466 LysR substrate binding domain YSA_RS24490 PF01575 MaoC like domain YSA_RS24495 PF12833 Helix-turn-helix domain YSA_RS24500 PF07690 Major Facilitator Superfamily YSA_RS24505 PF00881 Nitroreductase family YSA_RS24510 PF03573 outer membrane porin, OprD family YSA_RS24515 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YSA_RS24520 PF01037 Lrp/AsnC ligand binding domain YSA_RS24530 PF01810 LysE type translocator YSA_RS24535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24535 PF13426 PAS domain YSA_RS24535 PF00072 Response regulator receiver domain YSA_RS24540 PF00293 NUDIX domain YSA_RS24540 PF09297 NADH pyrophosphatase zinc ribbon domain YSA_RS24545 PF00392 Bacterial regulatory proteins, gntR family YSA_RS24545 PF07729 FCD domain YSA_RS24550 PF02627 Carboxymuconolactone decarboxylase family YSA_RS24555 PF01613 Flavin reductase like domain YSA_RS24560 PF00171 Aldehyde dehydrogenase family YSA_RS24565 PF12697 Alpha/beta hydrolase family YSA_RS24575 PF00296 Luciferase-like monooxygenase YSA_RS24580 PF01613 Flavin reductase like domain YSA_RS24585 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YSA_RS24590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS24590 PF12729 Four helix bundle sensory module for signal transduction YSA_RS24590 PF00672 HAMP domain YSA_RS24595 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS24600 PF02082 Transcriptional regulator YSA_RS24605 PF12852 Cupin YSA_RS24605 PF12833 Helix-turn-helix domain YSA_RS24620 PF00005 ABC transporter YSA_RS24630 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS24640 PF01118 Semialdehyde dehydrogenase, NAD binding domain YSA_RS24645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24645 PF03466 LysR substrate binding domain YSA_RS24650 PF08239 Bacterial SH3 domain YSA_RS24655 PF03573 outer membrane porin, OprD family YSA_RS24665 PF02028 BCCT, betaine/carnitine/choline family transporter YSA_RS24690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS24690 PF00034 Cytochrome c YSA_RS24695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YSA_RS24700 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS24700 PF01799 [2Fe-2S] binding domain YSA_RS24705 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding YSA_RS24705 PF18381 YcaO cyclodehydratase C-terminal domain YSA_RS24730 PF07995 Glucose / Sorbosone dehydrogenase YSA_RS24735 PF07715 TonB-dependent Receptor Plug Domain YSA_RS24735 PF00593 TonB dependent receptor YSA_RS24745 PF08713 DNA alkylation repair enzyme YSA_RS24755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24755 PF03466 LysR substrate binding domain YSA_RS24770 PF07729 FCD domain YSA_RS24770 PF00392 Bacterial regulatory proteins, gntR family YSA_RS24775 PF00171 Aldehyde dehydrogenase family YSA_RS24780 PF08666 SAF domain YSA_RS24780 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YSA_RS24785 PF07690 Major Facilitator Superfamily YSA_RS24790 PF00701 Dihydrodipicolinate synthetase family YSA_RS24805 PF07722 Peptidase C26 YSA_RS24820 PF00005 ABC transporter YSA_RS24835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24835 PF07730 Histidine kinase YSA_RS24835 PF05231 MASE1 YSA_RS24840 PF00196 Bacterial regulatory proteins, luxR family YSA_RS24840 PF00072 Response regulator receiver domain YSA_RS24850 PF13360 PQQ-like domain YSA_RS24850 PF01011 PQQ enzyme repeat YSA_RS24855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS24870 PF00753 Metallo-beta-lactamase superfamily YSA_RS24875 PF01011 PQQ enzyme repeat YSA_RS24875 PF13360 PQQ-like domain YSA_RS24880 PF00171 Aldehyde dehydrogenase family YSA_RS24890 PF08042 PqqA family YSA_RS24895 PF05402 Coenzyme PQQ synthesis protein D (PqqD) YSA_RS24900 PF00465 Iron-containing alcohol dehydrogenase YSA_RS24905 PF00072 Response regulator receiver domain YSA_RS24905 PF01627 Hpt domain YSA_RS24905 PF00672 HAMP domain YSA_RS24905 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS24905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS24905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YSA_RS24915 PF03573 outer membrane porin, OprD family YSA_RS24935 PF00368 Hydroxymethylglutaryl-coenzyme A reductase YSA_RS24940 PF00155 Aminotransferase class I and II YSA_RS24945 PF03466 LysR substrate binding domain YSA_RS24945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS24950 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS24955 PF02447 GntP family permease YSA_RS24965 PF08379 Bacterial transglutaminase-like N-terminal region YSA_RS24965 PF01841 Transglutaminase-like superfamily YSA_RS24970 PF04168 A predicted alpha-helical domain with a conserved ER motif. YSA_RS24970 PF14403 Circularly permuted ATP-grasp type 2 YSA_RS24975 PF14403 Circularly permuted ATP-grasp type 2 YSA_RS24980 PF01042 Endoribonuclease L-PSP YSA_RS24995 PF02028 BCCT, betaine/carnitine/choline family transporter YSA_RS25005 PF00171 Aldehyde dehydrogenase family YSA_RS25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25015 PF03466 LysR substrate binding domain YSA_RS25020 PF01613 Flavin reductase like domain YSA_RS25025 PF01717 Cobalamin-independent synthase, Catalytic domain YSA_RS25025 PF08267 Cobalamin-independent synthase, N-terminal domain YSA_RS25035 PF00462 Glutaredoxin YSA_RS25035 PF08534 Redoxin YSA_RS25040 PF03466 LysR substrate binding domain YSA_RS25040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25050 PF07690 Major Facilitator Superfamily YSA_RS25055 PF01546 Peptidase family M20/M25/M40 YSA_RS25055 PF07687 Peptidase dimerisation domain YSA_RS25070 PF03372 Endonuclease/Exonuclease/phosphatase family YSA_RS25080 PF00501 AMP-binding enzyme YSA_RS25100 PF00486 Transcriptional regulatory protein, C terminal YSA_RS25100 PF00072 Response regulator receiver domain YSA_RS25105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS25105 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS25110 PF03358 NADPH-dependent FMN reductase YSA_RS25115 PF01451 Low molecular weight phosphotyrosine protein phosphatase YSA_RS25120 PF02040 Arsenical pump membrane protein YSA_RS25125 PF01022 Bacterial regulatory protein, arsR family YSA_RS25150 PF01965 DJ-1/PfpI family YSA_RS25155 PF04239 Protein of unknown function (DUF421) YSA_RS25185 PF04244 Deoxyribodipyrimidine photo-lyase-related protein YSA_RS25215 PF00106 short chain dehydrogenase YSA_RS25225 PF13426 PAS domain YSA_RS25225 PF01740 STAS domain YSA_RS25230 PF13411 MerR HTH family regulatory protein YSA_RS25235 PF00924 Mechanosensitive ion channel YSA_RS25250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YSA_RS25250 PF14572 Phosphoribosyl synthetase-associated domain YSA_RS25255 PF00582 Universal stress protein family YSA_RS25260 PF00296 Luciferase-like monooxygenase YSA_RS25270 PF00005 ABC transporter YSA_RS25270 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS25295 PF00005 ABC transporter YSA_RS25300 PF03573 outer membrane porin, OprD family YSA_RS25305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS25305 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS25305 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS25325 PF00005 ABC transporter YSA_RS25330 PF02653 Branched-chain amino acid transport system / permease component YSA_RS25335 PF02653 Branched-chain amino acid transport system / permease component YSA_RS25340 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS25340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS25340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS25345 PF03358 NADPH-dependent FMN reductase YSA_RS25350 PF00296 Luciferase-like monooxygenase YSA_RS25360 PF00005 ABC transporter YSA_RS25360 PF12399 Branched-chain amino acid ATP-binding cassette transporter YSA_RS25370 PF02653 Branched-chain amino acid transport system / permease component YSA_RS25380 PF00158 Sigma-54 interaction domain YSA_RS25385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS25385 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS25390 PF00005 ABC transporter YSA_RS25390 PF00571 CBS domain YSA_RS25395 PF00550 Phosphopantetheine attachment site YSA_RS25400 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS25400 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS25410 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS25410 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS25420 PF00202 Aminotransferase class-III YSA_RS25430 PF00106 short chain dehydrogenase YSA_RS25450 PF13411 MerR HTH family regulatory protein YSA_RS25455 PF02525 Flavodoxin-like fold YSA_RS25465 PF03466 LysR substrate binding domain YSA_RS25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25470 PF00698 Acyl transferase domain YSA_RS25470 PF08659 KR domain YSA_RS25470 PF00550 Phosphopantetheine attachment site YSA_RS25470 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS25470 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS25470 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS25470 PF16197 Ketoacyl-synthetase C-terminal extension YSA_RS25470 PF14765 Polyketide synthase dehydratase YSA_RS25490 PF07690 Major Facilitator Superfamily YSA_RS25495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YSA_RS25495 PF13378 Enolase C-terminal domain-like YSA_RS25500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25500 PF03466 LysR substrate binding domain YSA_RS25505 PF03466 LysR substrate binding domain YSA_RS25505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25510 PF08666 SAF domain YSA_RS25510 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YSA_RS25525 PF07690 Major Facilitator Superfamily YSA_RS25530 PF18081 Fanconi anemia-associated nuclease SAP domain YSA_RS25530 PF08774 VRR-NUC domain YSA_RS25535 PF04851 Type III restriction enzyme, res subunit YSA_RS25535 PF13307 Helicase C-terminal domain YSA_RS25535 PF00929 Exonuclease YSA_RS25545 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS25545 PF00589 Phage integrase family YSA_RS25550 PF01774 UreD urease accessory protein YSA_RS25555 PF00547 Urease, gamma subunit YSA_RS25560 PF00699 Urease beta subunit YSA_RS25565 PF00449 Urease alpha-subunit, N-terminal domain YSA_RS25565 PF01979 Amidohydrolase family YSA_RS25570 PF05194 UreE urease accessory protein, C-terminal domain YSA_RS25570 PF02814 UreE urease accessory protein, N-terminal domain YSA_RS25580 PF01730 UreF YSA_RS25585 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS25655 PF00672 HAMP domain YSA_RS25655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS25655 PF17200 Single Cache domain 2 YSA_RS25660 PF02673 Bacitracin resistance protein BacA YSA_RS25675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25675 PF03466 LysR substrate binding domain YSA_RS25680 PF02525 Flavodoxin-like fold YSA_RS25685 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS25695 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS25695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS25705 PF00596 Class II Aldolase and Adducin N-terminal domain YSA_RS25710 PF00892 EamA-like transporter family YSA_RS25715 PF01906 Putative heavy-metal-binding YSA_RS25735 PF00144 Beta-lactamase YSA_RS25740 PF13593 SBF-like CPA transporter family (DUF4137) YSA_RS25760 PF01323 DSBA-like thioredoxin domain YSA_RS25770 PF01381 Helix-turn-helix YSA_RS25770 PF07883 Cupin domain YSA_RS25775 PF07690 Major Facilitator Superfamily YSA_RS25780 PF01292 Prokaryotic cytochrome b561 YSA_RS25790 PF08281 Sigma-70, region 4 YSA_RS25790 PF04542 Sigma-70 region 2 YSA_RS25800 PF03372 Endonuclease/Exonuclease/phosphatase family YSA_RS25810 PF01103 Surface antigen YSA_RS25810 PF17243 POTRA domain TamA domain 1 YSA_RS25810 PF07244 Surface antigen variable number repeat YSA_RS25815 PF04357 TamB, inner membrane protein subunit of TAM complex YSA_RS25850 PF01804 Penicillin amidase YSA_RS25855 PF00149 Calcineurin-like phosphoesterase YSA_RS25860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YSA_RS25865 PF00749 tRNA synthetases class I (E and Q), catalytic domain YSA_RS25865 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YSA_RS25870 PF09190 DALR domain YSA_RS25870 PF01406 tRNA synthetases class I (C) catalytic domain YSA_RS25875 PF00672 HAMP domain YSA_RS25875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS25875 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS25880 PF00486 Transcriptional regulatory protein, C terminal YSA_RS25880 PF00072 Response regulator receiver domain YSA_RS25885 PF07729 FCD domain YSA_RS25885 PF00392 Bacterial regulatory proteins, gntR family YSA_RS25890 PF08943 CsiD YSA_RS25895 PF01266 FAD dependent oxidoreductase YSA_RS25900 PF00324 Amino acid permease YSA_RS25910 PF00490 Delta-aminolevulinic acid dehydratase YSA_RS25915 PF08946 Osmosensory transporter coiled coil YSA_RS25915 PF00083 Sugar (and other) transporter YSA_RS25920 PF06912 Protein of unknown function (DUF1275) YSA_RS25925 PF00677 Lumazine binding domain YSA_RS25935 PF03466 LysR substrate binding domain YSA_RS25935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS25940 PF03746 LamB/YcsF family YSA_RS25950 PF02626 Carboxyltransferase domain, subdomain A and B YSA_RS25965 PF06039 Malate:quinone oxidoreductase (Mqo) YSA_RS25970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YSA_RS25970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YSA_RS25970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YSA_RS25980 PF16653 Saccharopine dehydrogenase C-terminal domain YSA_RS25980 PF03435 Saccharopine dehydrogenase NADP binding domain YSA_RS25985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YSA_RS25990 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS26000 PF01425 Amidase YSA_RS26015 PF02798 Glutathione S-transferase, N-terminal domain YSA_RS26025 PF07690 Major Facilitator Superfamily YSA_RS26030 PF12848 ABC transporter YSA_RS26030 PF00005 ABC transporter YSA_RS26055 PF01678 Diaminopimelate epimerase YSA_RS26090 PF02586 SOS response associated peptidase (SRAP) YSA_RS26095 PF00072 Response regulator receiver domain YSA_RS26095 PF02954 Bacterial regulatory protein, Fis family YSA_RS26095 PF00158 Sigma-54 interaction domain YSA_RS26100 PF00034 Cytochrome c YSA_RS26100 PF03150 Di-haem cytochrome c peroxidase YSA_RS26105 PF08447 PAS fold YSA_RS26105 PF08448 PAS fold YSA_RS26105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS26110 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS26110 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS26110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS26125 PF02424 ApbE family YSA_RS26130 PF00258 Flavodoxin YSA_RS26130 PF00175 Oxidoreductase NAD-binding domain YSA_RS26130 PF00667 FAD binding domain YSA_RS26145 PF00072 Response regulator receiver domain YSA_RS26145 PF00486 Transcriptional regulatory protein, C terminal YSA_RS26150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS26150 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS26155 PF00392 Bacterial regulatory proteins, gntR family YSA_RS26155 PF00155 Aminotransferase class I and II YSA_RS26160 PF00892 EamA-like transporter family YSA_RS26165 PF08447 PAS fold YSA_RS26170 PF02492 CobW/HypB/UreG, nucleotide-binding domain YSA_RS26170 PF07683 Cobalamin synthesis protein cobW C-terminal domain YSA_RS26175 PF02211 Nitrile hydratase beta subunit YSA_RS26180 PF02979 Nitrile hydratase, alpha chain YSA_RS26185 PF01425 Amidase YSA_RS26220 PF03466 LysR substrate binding domain YSA_RS26220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS26225 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS26225 PF00107 Zinc-binding dehydrogenase YSA_RS26245 PF18030 RimK PreATP-grasp domain YSA_RS26245 PF08443 RimK-like ATP-grasp domain YSA_RS26255 PF00462 Glutaredoxin YSA_RS26270 PF03466 LysR substrate binding domain YSA_RS26270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS26275 PF16197 Ketoacyl-synthetase C-terminal extension YSA_RS26275 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS26275 PF08659 KR domain YSA_RS26275 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS26275 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS26275 PF00698 Acyl transferase domain YSA_RS26275 PF00550 Phosphopantetheine attachment site YSA_RS26275 PF14765 Polyketide synthase dehydratase YSA_RS26275 PF08990 Erythronolide synthase docking YSA_RS26285 PF13673 Acetyltransferase (GNAT) domain YSA_RS26285 PF04229 GrpB protein YSA_RS26315 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS26315 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS26335 PF03466 LysR substrate binding domain YSA_RS26335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS26340 PF02558 Ketopantoate reductase PanE/ApbA YSA_RS26340 PF08546 Ketopantoate reductase PanE/ApbA C terminal YSA_RS26350 PF01575 MaoC like domain YSA_RS26355 PF02515 CoA-transferase family III YSA_RS26360 PF08501 Shikimate dehydrogenase substrate binding domain YSA_RS26360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YSA_RS26360 PF01488 Shikimate / quinate 5-dehydrogenase YSA_RS26365 PF01220 Dehydroquinase class II YSA_RS26370 PF07690 Major Facilitator Superfamily YSA_RS26425 PF00107 Zinc-binding dehydrogenase YSA_RS26425 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS26430 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YSA_RS26435 PF05853 beta-keto acid cleavage enzyme YSA_RS26440 PF07690 Major Facilitator Superfamily YSA_RS26450 PF00355 Rieske [2Fe-2S] domain YSA_RS26470 PF07044 Protein of unknown function (DUF1329) YSA_RS26485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS26485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS26485 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS26485 PF12806 Acetyl-CoA dehydrogenase C-terminal like YSA_RS26490 PF00501 AMP-binding enzyme YSA_RS26490 PF13193 AMP-binding enzyme C-terminal domain YSA_RS26500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YSA_RS26500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YSA_RS26510 PF02540 NAD synthase YSA_RS26510 PF00795 Carbon-nitrogen hydrolase YSA_RS26515 PF00149 Calcineurin-like phosphoesterase YSA_RS26545 PF01810 LysE type translocator YSA_RS26580 PF11112 Pyocin activator protein PrtN YSA_RS26610 PF00717 Peptidase S24-like YSA_RS26735 PF04984 Phage tail sheath protein subtilisin-like domain YSA_RS26735 PF17482 Phage tail sheath C-terminal domain YSA_RS26775 PF00182 Chitinase class I YSA_RS26800 PF12951 Passenger-associated-transport-repeat YSA_RS26810 PF00501 AMP-binding enzyme YSA_RS26810 PF13193 AMP-binding enzyme C-terminal domain YSA_RS26815 PF03974 Ecotin YSA_RS26820 PF00106 short chain dehydrogenase YSA_RS26830 PF00989 PAS fold YSA_RS26830 PF02954 Bacterial regulatory protein, Fis family YSA_RS26830 PF00158 Sigma-54 interaction domain YSA_RS26835 PF12911 N-terminal TM domain of oligopeptide transport permease C YSA_RS26835 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS26840 PF00528 Binding-protein-dependent transport system inner membrane component YSA_RS26845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YSA_RS26850 PF05698 Bacterial trigger factor protein (TF) C-terminus YSA_RS26855 PF00793 DAHP synthetase I family YSA_RS26860 PF01161 Phosphatidylethanolamine-binding protein YSA_RS26870 PF07690 Major Facilitator Superfamily YSA_RS26885 PF13533 Biotin-lipoyl like YSA_RS26895 PF17755 UvrA DNA-binding domain YSA_RS26910 PF06761 Intracellular multiplication and human macrophage-killing YSA_RS26910 PF14331 ImcF-related N-terminal domain YSA_RS26910 PF06744 Type VI secretion protein IcmF C-terminal YSA_RS26920 PF06744 Type VI secretion protein IcmF C-terminal YSA_RS26920 PF14331 ImcF-related N-terminal domain YSA_RS26920 PF06761 Intracellular multiplication and human macrophage-killing YSA_RS26930 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE YSA_RS26940 PF17871 AAA lid domain YSA_RS26940 PF10431 C-terminal, D2-small domain, of ClpB protein YSA_RS26940 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS26940 PF07724 AAA domain (Cdc48 subfamily) YSA_RS26950 PF05947 Type VI secretion system, TssF YSA_RS26960 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath YSA_RS26990 PF06715 Gp5 C-terminal repeat (3 copies) YSA_RS26990 PF04717 Type VI secretion system, phage-baseplate injector YSA_RS27005 PF05593 RHS Repeat YSA_RS27005 PF03527 RHS protein YSA_RS27070 PF07687 Peptidase dimerisation domain YSA_RS27070 PF01546 Peptidase family M20/M25/M40 YSA_RS27075 PF07690 Major Facilitator Superfamily YSA_RS27080 PF01425 Amidase YSA_RS27085 PF01614 Bacterial transcriptional regulator YSA_RS27085 PF09339 IclR helix-turn-helix domain YSA_RS27100 PF00890 FAD binding domain YSA_RS27110 PF07690 Major Facilitator Superfamily YSA_RS27115 PF13419 Haloacid dehalogenase-like hydrolase YSA_RS27120 PF01726 LexA DNA binding domain YSA_RS27120 PF00717 Peptidase S24-like YSA_RS27135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YSA_RS27135 PF14579 Helix-hairpin-helix motif YSA_RS27135 PF02811 PHP domain YSA_RS27135 PF01336 OB-fold nucleic acid binding domain YSA_RS27135 PF07733 Bacterial DNA polymerase III alpha NTPase domain YSA_RS27145 PF00248 Aldo/keto reductase family YSA_RS27150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27150 PF03466 LysR substrate binding domain YSA_RS27155 PF01144 Coenzyme A transferase YSA_RS27160 PF01144 Coenzyme A transferase YSA_RS27165 PF02667 Short chain fatty acid transporter YSA_RS27170 PF08671 Anti-repressor SinI YSA_RS27170 PF01381 Helix-turn-helix YSA_RS27195 PF16363 GDP-mannose 4,6 dehydratase YSA_RS27220 PF05199 GMC oxidoreductase YSA_RS27220 PF00732 GMC oxidoreductase YSA_RS27225 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS27225 PF14602 Hexapeptide repeat of succinyl-transferase YSA_RS27225 PF12464 Maltose acetyltransferase YSA_RS27240 PF00535 Glycosyl transferase family 2 YSA_RS27245 PF04393 Protein of unknown function (DUF535) YSA_RS27250 PF13439 Glycosyltransferase Family 4 YSA_RS27250 PF00534 Glycosyl transferases group 1 YSA_RS27265 PF02397 Bacterial sugar transferase YSA_RS27270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27270 PF03466 LysR substrate binding domain YSA_RS27275 PF03315 Serine dehydratase beta chain YSA_RS27275 PF03313 Serine dehydratase alpha chain YSA_RS27285 PF01266 FAD dependent oxidoreductase YSA_RS27290 PF13416 Bacterial extracellular solute-binding protein YSA_RS27295 PF00120 Glutamine synthetase, catalytic domain YSA_RS27310 PF00171 Aldehyde dehydrogenase family YSA_RS27315 PF03466 LysR substrate binding domain YSA_RS27315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27325 PF09411 Lipid A 3-O-deacylase (PagL) YSA_RS27330 PF00593 TonB dependent receptor YSA_RS27330 PF07715 TonB-dependent Receptor Plug Domain YSA_RS27340 PF00459 Inositol monophosphatase family YSA_RS27350 PF14525 AraC-binding-like domain YSA_RS27350 PF12833 Helix-turn-helix domain YSA_RS27355 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YSA_RS27355 PF00355 Rieske [2Fe-2S] domain YSA_RS27360 PF00866 Ring hydroxylating beta subunit YSA_RS27365 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS27365 PF00970 Oxidoreductase FAD-binding domain YSA_RS27365 PF00175 Oxidoreductase NAD-binding domain YSA_RS27370 PF00106 short chain dehydrogenase YSA_RS27375 PF07690 Major Facilitator Superfamily YSA_RS27380 PF04444 Catechol dioxygenase N terminus YSA_RS27380 PF00775 Dioxygenase YSA_RS27385 PF03594 Benzoate membrane transport protein YSA_RS27390 PF03573 outer membrane porin, OprD family YSA_RS27400 PF03466 LysR substrate binding domain YSA_RS27400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27405 PF00296 Luciferase-like monooxygenase YSA_RS27410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YSA_RS27415 PF00248 Aldo/keto reductase family YSA_RS27420 PF07992 Pyridine nucleotide-disulphide oxidoreductase YSA_RS27420 PF14759 Reductase C-terminal YSA_RS27425 PF07690 Major Facilitator Superfamily YSA_RS27430 PF17853 GGDEF-like domain YSA_RS27430 PF13556 PucR C-terminal helix-turn-helix domain YSA_RS27430 PF05651 Putative sugar diacid recognition YSA_RS27435 PF02595 Glycerate kinase family YSA_RS27440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27440 PF03466 LysR substrate binding domain YSA_RS27455 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS27455 PF00563 EAL domain YSA_RS27455 PF03707 Bacterial signalling protein N terminal repeat YSA_RS27460 PF02630 SCO1/SenC YSA_RS27475 PF03070 TENA/THI-4/PQQC family YSA_RS27480 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YSA_RS27490 PF07969 Amidohydrolase family YSA_RS27495 PF02423 Ornithine cyclodeaminase/mu-crystallin family YSA_RS27500 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS27500 PF13291 ACT domain YSA_RS27505 PF08348 YheO-like PAS domain YSA_RS27505 PF13309 HTH domain YSA_RS27530 PF00360 Phytochrome region YSA_RS27530 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS27530 PF00563 EAL domain YSA_RS27530 PF01590 GAF domain YSA_RS27535 PF00583 Acetyltransferase (GNAT) family YSA_RS27540 PF02308 MgtC family YSA_RS27545 PF04116 Fatty acid hydroxylase superfamily YSA_RS27550 PF01758 Sodium Bile acid symporter family YSA_RS27555 PF04261 Dyp-type peroxidase family YSA_RS27560 PF00248 Aldo/keto reductase family YSA_RS27585 PF17827 PrmC N-terminal domain YSA_RS27585 PF05175 Methyltransferase small domain YSA_RS27590 PF04107 Glutamate-cysteine ligase family 2(GCS2) YSA_RS27600 PF02735 Ku70/Ku80 beta-barrel domain YSA_RS27615 PF02585 GlcNAc-PI de-N-acetylase YSA_RS27625 PF13298 DNA polymerase Ligase (LigD) YSA_RS27625 PF04679 ATP dependent DNA ligase C terminal region YSA_RS27625 PF01068 ATP dependent DNA ligase domain YSA_RS27645 PF03706 Lysylphosphatidylglycerol synthase TM region YSA_RS27650 PF13091 PLD-like domain YSA_RS27655 PF03372 Endonuclease/Exonuclease/phosphatase family YSA_RS27670 PF00293 NUDIX domain YSA_RS27685 PF00171 Aldehyde dehydrogenase family YSA_RS27685 PF01575 MaoC like domain YSA_RS27690 PF03573 outer membrane porin, OprD family YSA_RS27695 PF00474 Sodium:solute symporter family YSA_RS27700 PF04341 Protein of unknown function, DUF485 YSA_RS27705 PF00175 Oxidoreductase NAD-binding domain YSA_RS27705 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS27705 PF00970 Oxidoreductase FAD-binding domain YSA_RS27710 PF01883 Iron-sulfur cluster assembly protein YSA_RS27715 PF05138 Phenylacetic acid catabolic protein YSA_RS27720 PF06243 Phenylacetic acid degradation B YSA_RS27725 PF05138 Phenylacetic acid catabolic protein YSA_RS27730 PF00501 AMP-binding enzyme YSA_RS27730 PF14535 AMP-binding enzyme C-terminal domain YSA_RS27735 PF00108 Thiolase, N-terminal domain YSA_RS27735 PF02803 Thiolase, C-terminal domain YSA_RS27740 PF03061 Thioesterase superfamily YSA_RS27745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YSA_RS27745 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain YSA_RS27745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YSA_RS27750 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS27755 PF00378 Enoyl-CoA hydratase/isomerase YSA_RS27760 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS27765 PF07848 PaaX-like protein YSA_RS27765 PF08223 PaaX-like protein C-terminal domain YSA_RS27775 PF00027 Cyclic nucleotide-binding domain YSA_RS27775 PF13545 Crp-like helix-turn-helix domain YSA_RS27800 PF10996 Beta-Casp domain YSA_RS27800 PF00753 Metallo-beta-lactamase superfamily YSA_RS27800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YSA_RS27810 PF05139 Erythromycin esterase YSA_RS27810 PF00156 Phosphoribosyl transferase domain YSA_RS27815 PF00156 Phosphoribosyl transferase domain YSA_RS27815 PF05139 Erythromycin esterase YSA_RS27825 PF13545 Crp-like helix-turn-helix domain YSA_RS27825 PF00027 Cyclic nucleotide-binding domain YSA_RS27840 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YSA_RS27840 PF09364 XFP N-terminal domain YSA_RS27840 PF09363 XFP C-terminal domain YSA_RS27850 PF01434 Peptidase family M41 YSA_RS27850 PF06480 FtsH Extracellular YSA_RS27850 PF17862 AAA+ lid domain YSA_RS27850 PF00004 ATPase family associated with various cellular activities (AAA) YSA_RS27870 PF00582 Universal stress protein family YSA_RS27885 PF00156 Phosphoribosyl transferase domain YSA_RS27895 PF04143 Sulphur transport YSA_RS27945 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS27945 PF00589 Phage integrase family YSA_RS27955 PF01546 Peptidase family M20/M25/M40 YSA_RS27955 PF07687 Peptidase dimerisation domain YSA_RS27960 PF07690 Major Facilitator Superfamily YSA_RS27965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27965 PF03466 LysR substrate binding domain YSA_RS27970 PF03466 LysR substrate binding domain YSA_RS27970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS27980 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YSA_RS27990 PF12697 Alpha/beta hydrolase family YSA_RS27995 PF00881 Nitroreductase family YSA_RS28005 PF01361 Tautomerase enzyme YSA_RS28015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28015 PF03466 LysR substrate binding domain YSA_RS28020 PF00106 short chain dehydrogenase YSA_RS28025 PF00296 Luciferase-like monooxygenase YSA_RS28030 PF01261 Xylose isomerase-like TIM barrel YSA_RS28040 PF00296 Luciferase-like monooxygenase YSA_RS28045 PF03466 LysR substrate binding domain YSA_RS28045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28055 PF03466 LysR substrate binding domain YSA_RS28060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28060 PF03466 LysR substrate binding domain YSA_RS28065 PF13378 Enolase C-terminal domain-like YSA_RS28065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YSA_RS28070 PF02426 Muconolactone delta-isomerase YSA_RS28075 PF00775 Dioxygenase YSA_RS28075 PF04444 Catechol dioxygenase N terminus YSA_RS28095 PF01638 HxlR-like helix-turn-helix YSA_RS28115 PF00665 Integrase core domain YSA_RS28115 PF09299 Mu transposase, C-terminal YSA_RS28135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YSA_RS28135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YSA_RS28140 PF02426 Muconolactone delta-isomerase YSA_RS28145 PF07690 Major Facilitator Superfamily YSA_RS28155 PF01144 Coenzyme A transferase YSA_RS28160 PF01144 Coenzyme A transferase YSA_RS28165 PF03466 LysR substrate binding domain YSA_RS28165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28180 PF02803 Thiolase, C-terminal domain YSA_RS28180 PF00108 Thiolase, N-terminal domain YSA_RS28185 PF03573 outer membrane porin, OprD family YSA_RS28190 PF03328 HpcH/HpaI aldolase/citrate lyase family YSA_RS28195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS28195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS28195 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS28210 PF07690 Major Facilitator Superfamily YSA_RS28220 PF01546 Peptidase family M20/M25/M40 YSA_RS28220 PF07687 Peptidase dimerisation domain YSA_RS28225 PF02830 V4R domain YSA_RS28225 PF00158 Sigma-54 interaction domain YSA_RS28225 PF06505 Activator of aromatic catabolism YSA_RS28225 PF02954 Bacterial regulatory protein, Fis family YSA_RS28230 PF00589 Phage integrase family YSA_RS28265 PF13520 Amino acid permease YSA_RS28280 PF00472 RF-1 domain YSA_RS28290 PF03741 Integral membrane protein TerC family YSA_RS28310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS28310 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS28310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS28315 PF00111 2Fe-2S iron-sulfur cluster binding domain YSA_RS28315 PF01799 [2Fe-2S] binding domain YSA_RS28320 PF03450 CO dehydrogenase flavoprotein C-terminal domain YSA_RS28320 PF00941 FAD binding domain in molybdopterin dehydrogenase YSA_RS28325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YSA_RS28325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YSA_RS28335 PF00994 Probable molybdopterin binding domain YSA_RS28335 PF02464 Competence-damaged protein YSA_RS28345 PF13823 Alcohol dehydrogenase GroES-associated YSA_RS28345 PF00107 Zinc-binding dehydrogenase YSA_RS28345 PF08240 Alcohol dehydrogenase GroES-like domain YSA_RS28355 PF00106 short chain dehydrogenase YSA_RS28360 PF02321 Outer membrane efflux protein YSA_RS28375 PF00873 AcrB/AcrD/AcrF family YSA_RS28380 PF00109 Beta-ketoacyl synthase, N-terminal domain YSA_RS28380 PF02801 Beta-ketoacyl synthase, C-terminal domain YSA_RS28385 PF07690 Major Facilitator Superfamily YSA_RS28400 PF02649 Type I GTP cyclohydrolase folE2 YSA_RS28405 PF00593 TonB dependent receptor YSA_RS28405 PF07715 TonB-dependent Receptor Plug Domain YSA_RS28415 PF00375 Sodium:dicarboxylate symporter family YSA_RS28425 PF03466 LysR substrate binding domain YSA_RS28425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28435 PF07715 TonB-dependent Receptor Plug Domain YSA_RS28435 PF07660 Secretin and TonB N terminus short domain YSA_RS28435 PF00593 TonB dependent receptor YSA_RS28455 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS28455 PF07694 5TMR of 5TMR-LYT YSA_RS28460 PF00924 Mechanosensitive ion channel YSA_RS28465 PF00202 Aminotransferase class-III YSA_RS28475 PF02223 Thymidylate kinase YSA_RS28480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28480 PF08446 PAS fold YSA_RS28480 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28480 PF01590 GAF domain YSA_RS28480 PF00360 Phytochrome region YSA_RS28485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YSA_RS28485 PF00205 Thiamine pyrophosphate enzyme, central domain YSA_RS28485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YSA_RS28490 PF03466 LysR substrate binding domain YSA_RS28490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS28500 PF07690 Major Facilitator Superfamily YSA_RS28510 PF00248 Aldo/keto reductase family YSA_RS28515 PF00672 HAMP domain YSA_RS28515 PF16527 Two-component sensor protein CpxA, periplasmic domain YSA_RS28515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28515 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28520 PF00486 Transcriptional regulatory protein, C terminal YSA_RS28520 PF00072 Response regulator receiver domain YSA_RS28535 PF04231 Endonuclease I YSA_RS28540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YSA_RS28540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YSA_RS28545 PF07690 Major Facilitator Superfamily YSA_RS28550 PF00294 pfkB family carbohydrate kinase YSA_RS28560 PF00356 Bacterial regulatory proteins, lacI family YSA_RS28565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YSA_RS28565 PF00034 Cytochrome c YSA_RS28570 PF05199 GMC oxidoreductase YSA_RS28570 PF00732 GMC oxidoreductase YSA_RS28575 PF13618 Gluconate 2-dehydrogenase subunit 3 YSA_RS28580 PF00300 Histidine phosphatase superfamily (branch 1) YSA_RS28595 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) YSA_RS28595 PF04717 Type VI secretion system, phage-baseplate injector YSA_RS28595 PF13296 Putative type VI secretion system Rhs element Vgr YSA_RS28615 PF03573 outer membrane porin, OprD family YSA_RS28620 PF07690 Major Facilitator Superfamily YSA_RS28625 PF00132 Bacterial transferase hexapeptide (six repeats) YSA_RS28630 PF02515 CoA-transferase family III YSA_RS28635 PF00682 HMGL-like YSA_RS28665 PF13532 2OG-Fe(II) oxygenase superfamily YSA_RS28685 PF05726 Pirin C-terminal cupin domain YSA_RS28685 PF02678 Pirin YSA_RS28695 PF01810 LysE type translocator YSA_RS28715 PF01890 Cobalamin synthesis G C-terminus YSA_RS28720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YSA_RS28725 PF06906 Protein of unknown function (DUF1272) YSA_RS28730 PF00072 Response regulator receiver domain YSA_RS28730 PF00196 Bacterial regulatory proteins, luxR family YSA_RS28735 PF00497 Bacterial extracellular solute-binding proteins, family 3 YSA_RS28735 PF00072 Response regulator receiver domain YSA_RS28735 PF00989 PAS fold YSA_RS28735 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28735 PF01627 Hpt domain YSA_RS28735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YSA_RS28740 PF08447 PAS fold YSA_RS28740 PF13426 PAS domain YSA_RS28750 PF00356 Bacterial regulatory proteins, lacI family YSA_RS28760 PF02447 GntP family permease YSA_RS28770 PF00158 Sigma-54 interaction domain YSA_RS28770 PF00072 Response regulator receiver domain YSA_RS28770 PF02954 Bacterial regulatory protein, Fis family YSA_RS28775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28785 PF00989 PAS fold YSA_RS28785 PF13188 PAS domain YSA_RS28785 PF13426 PAS domain YSA_RS28785 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28790 PF01464 Transglycosylase SLT domain YSA_RS28790 PF10145 Phage-related minor tail protein YSA_RS28790 PF01551 Peptidase family M23 YSA_RS28795 PF07963 Prokaryotic N-terminal methylation motif YSA_RS28795 PF08334 Type II secretion system (T2SS), protein G YSA_RS28800 PF00482 Type II secretion system (T2SS), protein F YSA_RS28805 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS28805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS28810 PF00873 AcrB/AcrD/AcrF family YSA_RS28815 PF02321 Outer membrane efflux protein YSA_RS28825 PF00072 Response regulator receiver domain YSA_RS28825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28825 PF13188 PAS domain YSA_RS28825 PF08448 PAS fold YSA_RS28825 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28830 PF13426 PAS domain YSA_RS28830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28830 PF00072 Response regulator receiver domain YSA_RS28845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YSA_RS28850 PF12792 CSS motif domain associated with EAL YSA_RS28850 PF00563 EAL domain YSA_RS28860 PF00571 CBS domain YSA_RS28860 PF03471 Transporter associated domain YSA_RS28860 PF03741 Integral membrane protein TerC family YSA_RS28865 PF01810 LysE type translocator YSA_RS28885 PF00171 Aldehyde dehydrogenase family YSA_RS28900 PF00291 Pyridoxal-phosphate dependent enzyme YSA_RS28900 PF00585 C-terminal regulatory domain of Threonine dehydratase YSA_RS28910 PF00512 His Kinase A (phospho-acceptor) domain YSA_RS28910 PF00672 HAMP domain YSA_RS28910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YSA_RS28915 PF00486 Transcriptional regulatory protein, C terminal YSA_RS28915 PF00072 Response regulator receiver domain YSA_RS28920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YSA_RS28920 PF00529 HlyD membrane-fusion protein of T1SS YSA_RS28925 PF00873 AcrB/AcrD/AcrF family YSA_RS28930 PF12804 MobA-like NTP transferase domain YSA_RS28935 PF00501 AMP-binding enzyme YSA_RS28935 PF13193 AMP-binding enzyme C-terminal domain YSA_RS28945 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit YSA_RS28960 PF00171 Aldehyde dehydrogenase family YSA_RS28980 PF00664 ABC transporter transmembrane region YSA_RS28980 PF00005 ABC transporter YSA_RS28985 PF02954 Bacterial regulatory protein, Fis family YSA_RS28985 PF01590 GAF domain YSA_RS28985 PF00158 Sigma-54 interaction domain YSA_RS28995 PF03783 Curli production assembly/transport component CsgG YSA_RS29000 PF10614 Type VIII secretion system (T8SS), CsgF protein YSA_RS29015 PF08334 Type II secretion system (T2SS), protein G YSA_RS29015 PF07963 Prokaryotic N-terminal methylation motif YSA_RS29020 PF08334 Type II secretion system (T2SS), protein G YSA_RS29020 PF07963 Prokaryotic N-terminal methylation motif YSA_RS29025 PF03958 Bacterial type II/III secretion system short domain YSA_RS29025 PF00263 Bacterial type II and III secretion system protein YSA_RS29050 PF00437 Type II/IV secretion system protein YSA_RS29060 PF02954 Bacterial regulatory protein, Fis family YSA_RS29060 PF00072 Response regulator receiver domain YSA_RS29060 PF00158 Sigma-54 interaction domain YSA_RS29100 PF02770 Acyl-CoA dehydrogenase, middle domain YSA_RS29100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YSA_RS29100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YSA_RS29105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YSA_RS29105 PF03466 LysR substrate binding domain YSA_RS29115 PF04816 tRNA (adenine(22)-N(1))-methyltransferase YSA_RS29125 PF01136 Peptidase family U32 YSA_RS29125 PF12392 Collagenase YSA_RS29130 PF02954 Bacterial regulatory protein, Fis family YSA_RS29130 PF00072 Response regulator receiver domain YSA_RS29130 PF00158 Sigma-54 interaction domain YSA_RS29145 PF00589 Phage integrase family YSA_RS29245 PF01751 Toprim domain YSA_RS29245 PF17915 Reverse gyrase zinc finger YSA_RS29245 PF00270 DEAD/DEAH box helicase YSA_RS29245 PF01131 DNA topoisomerase YSA_RS29270 PF01464 Transglycosylase SLT domain YSA_RS29295 PF13098 Thioredoxin-like domain YSA_RS29305 PF08401 Domain of unknown function (DUF1738) YSA_RS29305 PF13362 Toprim domain YSA_RS29305 PF18818 Metallopeptidase superfamily domain YSA_RS29315 PF02899 Phage integrase, N-terminal SAM-like domain YSA_RS29315 PF00589 Phage integrase family YSA_RS29320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YSA_RS29320 PF02811 PHP domain YSA_RS29320 PF07733 Bacterial DNA polymerase III alpha NTPase domain YSA_RS29320 PF14579 Helix-hairpin-helix motif YSA_RS29355 PF00216 Bacterial DNA-binding protein YSA_RS29370 PF04381 Putative exonuclease, RdgC YSA_RS29400 PF00436 Single-strand binding protein family YSA_RS29425 PF00717 Peptidase S24-like YSA_RS29430 PF11799 impB/mucB/samB family C-terminal domain YSA_RS29430 PF00817 impB/mucB/samB family YSA_RS29430 PF13438 Domain of unknown function (DUF4113) YSA_RS29430 PF11798 IMS family HHH motif YSA_RS29445 PF03796 DnaB-like helicase C terminal domain YSA_RS29445 PF00772 DnaB-like helicase N terminal domain YSA_RS29495 PF00563 EAL domain YSA_RS29495 PF00360 Phytochrome region YSA_RS29495 PF00990 Diguanylate cyclase, GGDEF domain YSA_RS29495 PF01590 GAF domain YSA_RS29510 PF01751 Toprim domain YSA_RS29510 PF01131 DNA topoisomerase YSA_RS29545 PF01478 Type IV leader peptidase family YSA_RS29545 PF06750 Bacterial Peptidase A24 N-terminal domain YSA_RS29640 PF17762 HTH domain found in ParB protein YSA_RS29640 PF02195 ParB-like nuclease domain YSA_RS29645 PF13614 AAA domain YSA_RS29700 PF00437 Type II/IV secretion system protein YSA_RS29725 PF07655 Secretin N-terminal domain YSA_RS29725 PF00263 Bacterial type II and III secretion system protein YSA_RS29740 PF00437 Type II/IV secretion system protein YSA_RS29755 PF00437 Type II/IV secretion system protein