LT40_RS00050 SM01060 LT40_RS00050 LT40_RS00055 SM00248 ankyrin repeats LT40_RS00085 SM00382 ATPases associated with a variety of cellular activities LT40_RS00085 SM00464 Found in ATP-dependent protease La (LON) LT40_RS00095 SM00052 Putative diguanylate phosphodiesterase LT40_RS00095 SM00267 diguanylate cyclase LT40_RS00095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS00110 SM00564 beta-propeller repeat LT40_RS00165 SM01130 LT40_RS00165 LT40_RS00175 SM00849 Metallo-beta-lactamase superfamily LT40_RS00215 SM00421 helix_turn_helix, Lux Regulon LT40_RS00235 SM00830 Chorismate mutase type II LT40_RS00265 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS00265 SM00895 LT40_RS00265 LT40_RS00275 SM00382 ATPases associated with a variety of cellular activities LT40_RS00310 SM00341 Helicase and RNase D C-terminal LT40_RS00310 SM00474 3'-5' exonuclease LT40_RS00345 SM00507 HNH nucleases LT40_RS00380 SM00387 Histidine kinase-like ATPases LT40_RS00380 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS00390 SM00235 Zinc-dependent metalloprotease LT40_RS00400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LT40_RS00445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LT40_RS00455 SM00935 Outer membrane protein (OmpH-like) LT40_RS00485 SM00481 DNA polymerase alpha chain like domain LT40_RS00495 SM00977 TilS substrate C-terminal domain LT40_RS00510 SM01192 LT40_RS00510 LT40_RS00510 SM01193 LT40_RS00510 LT40_RS00560 SM00257 Lysin motif LT40_RS00575 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LT40_RS00575 SM00534 ATPase domain of DNA mismatch repair MUTS family LT40_RS00585 SM00382 ATPases associated with a variety of cellular activities LT40_RS00600 SM01144 LT40_RS00600 LT40_RS00605 SM00421 helix_turn_helix, Lux Regulon LT40_RS00605 SM00448 cheY-homologous receiver domain LT40_RS00635 SM00363 S4 RNA-binding domain LT40_RS00640 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS00665 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS00670 SM00363 S4 RNA-binding domain LT40_RS00705 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LT40_RS00710 SM00822 LT40_RS00710 LT40_RS00720 SM00825 Beta-ketoacyl synthase LT40_RS00780 SM00769 Water Stress and Hypersensitive response LT40_RS00825 SM00491 LT40_RS00825 LT40_RS00860 SM00382 ATPases associated with a variety of cellular activities LT40_RS00865 SM00382 ATPases associated with a variety of cellular activities LT40_RS00890 SM00487 DEAD-like helicases superfamily LT40_RS00890 SM00490 helicase superfamily c-terminal domain LT40_RS00900 SM00357 Cold shock protein domain LT40_RS00920 SM00487 DEAD-like helicases superfamily LT40_RS00920 SM00490 helicase superfamily c-terminal domain LT40_RS00935 SM00382 ATPases associated with a variety of cellular activities LT40_RS00945 SM00369 Leucine-rich repeats, typical (most populated) subfamily LT40_RS00955 SM00859 Semialdehyde dehydrogenase, NAD binding domain LT40_RS01025 SM00363 S4 RNA-binding domain LT40_RS01060 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS01075 SM00382 ATPases associated with a variety of cellular activities LT40_RS01080 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS01130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LT40_RS01165 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS01165 SM00924 MgtE intracellular N domain LT40_RS01190 SM00382 ATPases associated with a variety of cellular activities LT40_RS01190 SM00448 cheY-homologous receiver domain LT40_RS01195 SM00387 Histidine kinase-like ATPases LT40_RS01195 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS01200 SM00382 ATPases associated with a variety of cellular activities LT40_RS01215 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS01220 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LT40_RS01235 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LT40_RS01240 SM00822 LT40_RS01240 LT40_RS01260 SM00463 Small MutS-related domain LT40_RS01310 SM00248 ankyrin repeats LT40_RS01350 SM00460 Transglutaminase/protease-like homologues LT40_RS01395 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS01405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS01405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS01410 SM00267 diguanylate cyclase LT40_RS01415 SM00052 Putative diguanylate phosphodiesterase LT40_RS01415 SM00267 diguanylate cyclase LT40_RS01420 SM00382 ATPases associated with a variety of cellular activities LT40_RS01425 SM00387 Histidine kinase-like ATPases LT40_RS01425 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS01435 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS01510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS01510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS01515 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS01530 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS01595 SM01012 LT40_RS01595 LT40_RS01610 SM00382 ATPases associated with a variety of cellular activities LT40_RS01615 SM00382 ATPases associated with a variety of cellular activities LT40_RS01650 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS01655 SM00829 Enoylreductase LT40_RS01690 SM00564 beta-propeller repeat LT40_RS01705 SM00841 Elongation factor P, C-terminal LT40_RS01705 SM01185 LT40_RS01705 LT40_RS01760 SM00387 Histidine kinase-like ATPases LT40_RS01760 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS01765 SM00448 cheY-homologous receiver domain LT40_RS01765 SM00862 Transcriptional regulatory protein, C terminal LT40_RS01785 SM00460 Transglutaminase/protease-like homologues LT40_RS01805 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS01825 SM00382 ATPases associated with a variety of cellular activities LT40_RS01945 SM00981 LT40_RS01945 LT40_RS01955 SM00347 helix_turn_helix multiple antibiotic resistance protein LT40_RS01985 SM00840 LT40_RS01985 LT40_RS02025 SM00382 ATPases associated with a variety of cellular activities LT40_RS02030 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS02035 SM00382 ATPases associated with a variety of cellular activities LT40_RS02040 SM00382 ATPases associated with a variety of cellular activities LT40_RS02045 SM00382 ATPases associated with a variety of cellular activities LT40_RS02090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS02090 SM00387 Histidine kinase-like ATPases LT40_RS02090 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS02105 SM00382 ATPases associated with a variety of cellular activities LT40_RS02105 SM00994 ClpX C4-type zinc finger LT40_RS02105 SM01086 C-terminal, D2-small domain, of ClpB protein LT40_RS02110 SM00382 ATPases associated with a variety of cellular activities LT40_RS02110 SM00464 Found in ATP-dependent protease La (LON) LT40_RS02115 SM00411 bacterial (prokaryotic) histone like domain LT40_RS02130 SM00382 ATPases associated with a variety of cellular activities LT40_RS02155 SM00257 Lysin motif LT40_RS02160 SM00849 Metallo-beta-lactamase superfamily LT40_RS02175 SM00479 LT40_RS02175 LT40_RS02205 SM00364 Leucine-rich repeats, bacterial type LT40_RS02205 SM00369 Leucine-rich repeats, typical (most populated) subfamily LT40_RS02220 SM00631 LT40_RS02220 LT40_RS02235 SM00382 ATPases associated with a variety of cellular activities LT40_RS02245 SM00862 Transcriptional regulatory protein, C terminal LT40_RS02255 SM01230 LT40_RS02255 LT40_RS02280 SM00858 LT40_RS02280 LT40_RS02285 SM00260 Two component signalling adaptor domain LT40_RS02285 SM00448 cheY-homologous receiver domain LT40_RS02290 SM00138 Methyltransferase, chemotaxis proteins LT40_RS02340 SM00047 Lysozyme subfamily 2 LT40_RS02385 SM00382 ATPases associated with a variety of cellular activities LT40_RS02390 SM00091 PAS domain LT40_RS02390 SM00387 Histidine kinase-like ATPases LT40_RS02390 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS02395 SM00382 ATPases associated with a variety of cellular activities LT40_RS02395 SM00448 cheY-homologous receiver domain LT40_RS02420 SM00382 ATPases associated with a variety of cellular activities LT40_RS02435 SM00331 Sigma factor PP2C-like phosphatases LT40_RS02435 SM00448 cheY-homologous receiver domain LT40_RS02495 SM00382 ATPases associated with a variety of cellular activities LT40_RS02495 SM00962 SRP54-type protein, GTPase domain LT40_RS02510 SM00448 cheY-homologous receiver domain LT40_RS02520 SM00073 Histidine Phosphotransfer domain LT40_RS02520 SM00260 Two component signalling adaptor domain LT40_RS02520 SM00387 Histidine kinase-like ATPases LT40_RS02520 SM01231 LT40_RS02520 LT40_RS02525 SM00448 cheY-homologous receiver domain LT40_RS02545 SM00260 Two component signalling adaptor domain LT40_RS02550 SM00260 Two component signalling adaptor domain LT40_RS02575 SM00382 ATPases associated with a variety of cellular activities LT40_RS02615 SM00028 Tetratricopeptide repeats LT40_RS02690 SM00100 Cyclic nucleotide-monophosphate binding domain LT40_RS02690 SM00419 helix_turn_helix, cAMP Regulatory protein LT40_RS02710 SM00448 cheY-homologous receiver domain LT40_RS02725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS02725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS02775 SM00862 Transcriptional regulatory protein, C terminal LT40_RS02780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS02780 SM00387 Histidine kinase-like ATPases LT40_RS02785 SM00448 cheY-homologous receiver domain LT40_RS02785 SM00862 Transcriptional regulatory protein, C terminal LT40_RS02870 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS02950 SM00947 Carbonic anhydrase LT40_RS02975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS02975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS02980 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS02980 SM00382 ATPases associated with a variety of cellular activities LT40_RS03020 SM00670 Large family of predicted nucleotide-binding domains LT40_RS03060 SM00487 DEAD-like helicases superfamily LT40_RS03060 SM00490 helicase superfamily c-terminal domain LT40_RS03070 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS03085 SM00382 ATPases associated with a variety of cellular activities LT40_RS03095 SM00465 GIY-YIG type nucleases (URI domain) LT40_RS03110 SM00411 bacterial (prokaryotic) histone like domain LT40_RS03155 SM00357 Cold shock protein domain LT40_RS03175 SM00091 PAS domain LT40_RS03175 SM00382 ATPases associated with a variety of cellular activities LT40_RS03190 SM00965 Secretin and TonB N terminus short domain LT40_RS03205 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT40_RS03220 SM00448 cheY-homologous receiver domain LT40_RS03220 SM00862 Transcriptional regulatory protein, C terminal LT40_RS03225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS03225 SM00387 Histidine kinase-like ATPases LT40_RS03225 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS03245 SM00382 ATPases associated with a variety of cellular activities LT40_RS03305 SM00260 Two component signalling adaptor domain LT40_RS03305 SM00448 cheY-homologous receiver domain LT40_RS03405 SM01323 LT40_RS03405 LT40_RS03430 SM00382 ATPases associated with a variety of cellular activities LT40_RS03440 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS03445 SM01007 Class II Aldolase and Adducin N-terminal domain LT40_RS03505 SM00271 DnaJ molecular chaperone homology domain LT40_RS03525 SM00562 LT40_RS03525 LT40_RS03535 SM00028 Tetratricopeptide repeats LT40_RS03540 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS03560 SM00564 beta-propeller repeat LT40_RS03580 SM00917 LeuA allosteric (dimerisation) domain LT40_RS03595 SM00382 ATPases associated with a variety of cellular activities LT40_RS03600 SM00382 ATPases associated with a variety of cellular activities LT40_RS03645 SM00387 Histidine kinase-like ATPases LT40_RS03645 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS03650 SM00448 cheY-homologous receiver domain LT40_RS03655 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS03655 SM00895 LT40_RS03655 LT40_RS03660 SM01130 LT40_RS03660 LT40_RS03685 SM00845 GatB domain LT40_RS03720 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS03795 SM00382 ATPases associated with a variety of cellular activities LT40_RS03815 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS03820 SM00382 ATPases associated with a variety of cellular activities LT40_RS03875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LT40_RS03920 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS03985 SM00749 bacterial OsmY and nodulation domain LT40_RS04075 SM00842 Cell division protein FtsA LT40_RS04080 SM00864 Tubulin/FtsZ family, GTPase domain LT40_RS04080 SM00865 Tubulin/FtsZ family, C-terminal domain LT40_RS04095 SM00957 SecA DEAD-like domain LT40_RS04095 SM00958 SecA preprotein cross-linking domain LT40_RS04115 SM00091 PAS domain LT40_RS04115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS04115 SM00387 Histidine kinase-like ATPases LT40_RS04115 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS04155 SM00883 Chaperonin 10 Kd subunit LT40_RS04165 SM00448 cheY-homologous receiver domain LT40_RS04165 SM00862 Transcriptional regulatory protein, C terminal LT40_RS04170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS04170 SM00387 Histidine kinase-like ATPases LT40_RS04170 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS04210 SM00052 Putative diguanylate phosphodiesterase LT40_RS04210 SM00267 diguanylate cyclase LT40_RS04250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS04260 SM00563 Phosphate acyltransferases LT40_RS04285 SM00479 LT40_RS04285 LT40_RS04310 SM00382 ATPases associated with a variety of cellular activities LT40_RS04325 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS04335 SM00882 Coenzyme A transferase LT40_RS04340 SM00882 Coenzyme A transferase LT40_RS04355 SM00998 Adenylosuccinate lyase C-terminus LT40_RS04405 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS04420 SM00903 Flavin reductase like domain LT40_RS04430 SM00382 ATPases associated with a variety of cellular activities LT40_RS04430 SM00448 cheY-homologous receiver domain LT40_RS04435 SM00387 Histidine kinase-like ATPases LT40_RS04435 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS04440 SM01217 LT40_RS04440 LT40_RS04450 SM00421 helix_turn_helix, Lux Regulon LT40_RS04480 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS04480 SM00895 LT40_RS04480 LT40_RS04495 SM00861 Transketolase, pyrimidine binding domain LT40_RS04510 SM00822 LT40_RS04510 LT40_RS04530 SM00363 S4 RNA-binding domain LT40_RS04545 SM00986 Uracil DNA glycosylase superfamily LT40_RS04545 SM00987 UreE urease accessory protein, C-terminal domain LT40_RS04570 SM00448 cheY-homologous receiver domain LT40_RS04570 SM00862 Transcriptional regulatory protein, C terminal LT40_RS04575 SM00387 Histidine kinase-like ATPases LT40_RS04575 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS04620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LT40_RS04640 SM00358 Double-stranded RNA binding motif LT40_RS04640 SM00535 Ribonuclease III family LT40_RS04685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS04695 SM00226 Low molecular weight phosphatase family LT40_RS04740 SM00267 diguanylate cyclase LT40_RS04775 SM00731 SprT homologues. LT40_RS04835 SM00849 Metallo-beta-lactamase superfamily LT40_RS04915 SM00357 Cold shock protein domain LT40_RS04930 SM00834 Putative regulatory protein LT40_RS04950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LT40_RS04955 SM00382 ATPases associated with a variety of cellular activities LT40_RS05020 SM00487 DEAD-like helicases superfamily LT40_RS05020 SM00490 helicase superfamily c-terminal domain LT40_RS05045 SM00387 Histidine kinase-like ATPases LT40_RS05045 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS05045 SM00448 cheY-homologous receiver domain LT40_RS05055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS05090 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS05095 SM00382 ATPases associated with a variety of cellular activities LT40_RS05115 SM00382 ATPases associated with a variety of cellular activities LT40_RS05125 SM01007 Class II Aldolase and Adducin N-terminal domain LT40_RS05130 SM00450 Rhodanese Homology Domain LT40_RS05150 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS05165 SM00382 ATPases associated with a variety of cellular activities LT40_RS05225 SM00382 ATPases associated with a variety of cellular activities LT40_RS05245 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS05270 SM00487 DEAD-like helicases superfamily LT40_RS05270 SM00490 helicase superfamily c-terminal domain LT40_RS05315 SM00382 ATPases associated with a variety of cellular activities LT40_RS05345 SM00479 LT40_RS05345 LT40_RS05370 SM00421 helix_turn_helix, Lux Regulon LT40_RS05370 SM00448 cheY-homologous receiver domain LT40_RS05380 SM00478 endonuclease III LT40_RS05380 SM00525 LT40_RS05380 LT40_RS05415 SM00382 ATPases associated with a variety of cellular activities LT40_RS05415 SM00487 DEAD-like helicases superfamily LT40_RS05415 SM00490 helicase superfamily c-terminal domain LT40_RS05415 SM00847 Helicase associated domain (HA2) Add an annotation LT40_RS05435 SM00382 ATPases associated with a variety of cellular activities LT40_RS05480 SM00965 Secretin and TonB N terminus short domain LT40_RS05485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS05485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS05505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS05505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS05520 SM00487 DEAD-like helicases superfamily LT40_RS05520 SM00490 helicase superfamily c-terminal domain LT40_RS05540 SM00420 helix_turn_helix, Deoxyribose operon repressor LT40_RS05540 SM01134 LT40_RS05540 LT40_RS05585 SM01329 LT40_RS05585 LT40_RS05590 SM00859 Semialdehyde dehydrogenase, NAD binding domain LT40_RS05600 SM00448 cheY-homologous receiver domain LT40_RS05600 SM00862 Transcriptional regulatory protein, C terminal LT40_RS05605 SM00387 Histidine kinase-like ATPases LT40_RS05605 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS05615 SM01144 LT40_RS05615 LT40_RS05625 SM00382 ATPases associated with a variety of cellular activities LT40_RS05705 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS05715 SM00052 Putative diguanylate phosphodiesterase LT40_RS05715 SM00267 diguanylate cyclase LT40_RS05720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LT40_RS05720 SM00245 tail specific protease LT40_RS05725 SM00829 Enoylreductase LT40_RS05745 SM00341 Helicase and RNase D C-terminal LT40_RS05745 SM00487 DEAD-like helicases superfamily LT40_RS05745 SM00490 helicase superfamily c-terminal domain LT40_RS05745 SM00956 LT40_RS05745 LT40_RS05750 SM00347 helix_turn_helix multiple antibiotic resistance protein LT40_RS05775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS05775 SM00387 Histidine kinase-like ATPases LT40_RS05775 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS05785 SM00448 cheY-homologous receiver domain LT40_RS05785 SM00862 Transcriptional regulatory protein, C terminal LT40_RS05800 SM00481 DNA polymerase alpha chain like domain LT40_RS05820 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS05820 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LT40_RS05830 SM00382 ATPases associated with a variety of cellular activities LT40_RS05870 SM00387 Histidine kinase-like ATPases LT40_RS05870 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS05870 SM00448 cheY-homologous receiver domain LT40_RS05880 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS05880 SM00895 LT40_RS05880 LT40_RS05885 SM00347 helix_turn_helix multiple antibiotic resistance protein LT40_RS05905 SM00487 DEAD-like helicases superfamily LT40_RS05905 SM00490 helicase superfamily c-terminal domain LT40_RS05915 SM00387 Histidine kinase-like ATPases LT40_RS05930 SM00825 Beta-ketoacyl synthase LT40_RS05940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS05940 SM00387 Histidine kinase-like ATPases LT40_RS05940 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS05940 SM00448 cheY-homologous receiver domain LT40_RS05955 SM00855 Phosphoglycerate mutase family LT40_RS05985 SM00028 Tetratricopeptide repeats LT40_RS05990 SM00327 von Willebrand factor (vWF) type A domain LT40_RS06050 SM00382 ATPases associated with a variety of cellular activities LT40_RS06060 SM00479 LT40_RS06060 LT40_RS06090 SM00450 Rhodanese Homology Domain LT40_RS06100 SM00382 ATPases associated with a variety of cellular activities LT40_RS06105 SM00052 Putative diguanylate phosphodiesterase LT40_RS06105 SM00091 PAS domain LT40_RS06105 SM00267 diguanylate cyclase LT40_RS06140 SM00434 DNA Topoisomerase IV LT40_RS06150 SM00830 Chorismate mutase type II LT40_RS06170 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS06185 SM00411 bacterial (prokaryotic) histone like domain LT40_RS06200 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS06265 SM00091 PAS domain LT40_RS06265 SM00387 Histidine kinase-like ATPases LT40_RS06265 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS06305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS06305 SM00091 PAS domain LT40_RS06305 SM00387 Histidine kinase-like ATPases LT40_RS06305 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS06305 SM00448 cheY-homologous receiver domain LT40_RS06365 SM00052 Putative diguanylate phosphodiesterase LT40_RS06365 SM00091 PAS domain LT40_RS06365 SM00267 diguanylate cyclase LT40_RS06420 SM00382 ATPases associated with a variety of cellular activities LT40_RS06435 SM00450 Rhodanese Homology Domain LT40_RS06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS06505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS06510 SM00880 LT40_RS06510 LT40_RS06530 SM00478 endonuclease III LT40_RS06530 SM01009 AlkA N-terminal domain LT40_RS06585 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS06610 SM00954 Region found in RelA / SpoT proteins LT40_RS06720 SM00855 Phosphoglycerate mutase family LT40_RS06745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS06745 SM00091 PAS domain LT40_RS06745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS06760 SM00965 Secretin and TonB N terminus short domain LT40_RS06770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS06770 SM00091 PAS domain LT40_RS06770 SM00387 Histidine kinase-like ATPases LT40_RS06770 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS06770 SM00448 cheY-homologous receiver domain LT40_RS06795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS06810 SM00382 ATPases associated with a variety of cellular activities LT40_RS06860 SM00422 helix_turn_helix, mercury resistance LT40_RS06880 SM00878 Biotin carboxylase C-terminal domain LT40_RS06900 SM00421 helix_turn_helix, Lux Regulon LT40_RS06925 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS07045 SM01150 LT40_RS07045 LT40_RS07110 SM00382 ATPases associated with a variety of cellular activities LT40_RS07135 SM01130 LT40_RS07135 LT40_RS07150 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS07185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LT40_RS07225 SM00852 Probable molybdopterin binding domain LT40_RS07230 SM00852 Probable molybdopterin binding domain LT40_RS07240 SM00046 Diacylglycerol kinase catalytic domain (presumed) LT40_RS07245 SM00260 Two component signalling adaptor domain LT40_RS07245 SM00448 cheY-homologous receiver domain LT40_RS07260 SM00382 ATPases associated with a variety of cellular activities LT40_RS07290 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LT40_RS07290 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LT40_RS07290 SM00493 LT40_RS07290 LT40_RS07350 SM00382 ATPases associated with a variety of cellular activities LT40_RS07365 SM01012 LT40_RS07365 LT40_RS07375 SM00487 DEAD-like helicases superfamily LT40_RS07375 SM00490 helicase superfamily c-terminal domain LT40_RS07380 SM00487 DEAD-like helicases superfamily LT40_RS07380 SM00490 helicase superfamily c-terminal domain LT40_RS07380 SM00982 LT40_RS07380 LT40_RS07380 SM01058 CarD-like/TRCF domain LT40_RS07385 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT40_RS07425 SM00448 cheY-homologous receiver domain LT40_RS07430 SM00382 ATPases associated with a variety of cellular activities LT40_RS07450 SM00382 ATPases associated with a variety of cellular activities LT40_RS07460 SM00354 helix_turn _helix lactose operon repressor LT40_RS07495 SM00357 Cold shock protein domain LT40_RS07505 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LT40_RS07530 SM00873 B3/4 domain LT40_RS07530 SM00874 tRNA synthetase B5 domain LT40_RS07530 SM00896 Ferredoxin-fold anticodon binding domain LT40_RS07535 SM00411 bacterial (prokaryotic) histone like domain LT40_RS07540 SM00422 helix_turn_helix, mercury resistance LT40_RS07555 SM00849 Metallo-beta-lactamase superfamily LT40_RS07560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS07605 SM00382 ATPases associated with a variety of cellular activities LT40_RS07675 SM00052 Putative diguanylate phosphodiesterase LT40_RS07675 SM00267 diguanylate cyclase LT40_RS07680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS07680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS07710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS07715 SM00052 Putative diguanylate phosphodiesterase LT40_RS07720 SM00382 ATPases associated with a variety of cellular activities LT40_RS07770 SM00382 ATPases associated with a variety of cellular activities LT40_RS07845 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS07880 SM00822 LT40_RS07880 LT40_RS07915 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LT40_RS07920 SM01092 CO dehydrogenase flavoprotein C-terminal domain LT40_RS07940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS07950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS07950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS07955 SM00091 PAS domain LT40_RS07955 SM00387 Histidine kinase-like ATPases LT40_RS07955 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS07955 SM00448 cheY-homologous receiver domain LT40_RS07960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS07960 SM00387 Histidine kinase-like ATPases LT40_RS07970 SM00267 diguanylate cyclase LT40_RS07980 SM00998 Adenylosuccinate lyase C-terminus LT40_RS07985 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS07985 SM00866 LT40_RS07985 LT40_RS07995 SM01133 LT40_RS07995 LT40_RS08000 SM00420 helix_turn_helix, Deoxyribose operon repressor LT40_RS08000 SM01134 LT40_RS08000 LT40_RS08020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS08020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS08040 SM00422 helix_turn_helix, mercury resistance LT40_RS08085 SM00448 cheY-homologous receiver domain LT40_RS08085 SM00862 Transcriptional regulatory protein, C terminal LT40_RS08100 SM00862 Transcriptional regulatory protein, C terminal LT40_RS08105 SM01130 LT40_RS08105 LT40_RS08115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS08115 SM00382 ATPases associated with a variety of cellular activities LT40_RS08130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS08130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS08145 SM01116 LT40_RS08145 LT40_RS08155 SM01130 LT40_RS08155 LT40_RS08160 SM00382 ATPases associated with a variety of cellular activities LT40_RS08180 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS08185 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS08210 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS08210 SM00895 LT40_RS08210 LT40_RS08245 SM00825 Beta-ketoacyl synthase LT40_RS08275 SM00382 ATPases associated with a variety of cellular activities LT40_RS08290 SM00382 ATPases associated with a variety of cellular activities LT40_RS08295 SM00382 ATPases associated with a variety of cellular activities LT40_RS08335 SM00830 Chorismate mutase type II LT40_RS08360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS08360 SM00387 Histidine kinase-like ATPases LT40_RS08360 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS08365 SM00448 cheY-homologous receiver domain LT40_RS08365 SM00862 Transcriptional regulatory protein, C terminal LT40_RS08385 SM00450 Rhodanese Homology Domain LT40_RS08390 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS08400 SM01236 LT40_RS08400 LT40_RS08470 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS08540 SM00382 ATPases associated with a variety of cellular activities LT40_RS08545 SM00822 LT40_RS08545 LT40_RS08555 SM00052 Putative diguanylate phosphodiesterase LT40_RS08555 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS08560 SM00382 ATPases associated with a variety of cellular activities LT40_RS08635 SM00421 helix_turn_helix, Lux Regulon LT40_RS08645 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS08675 SM00990 LT40_RS08675 LT40_RS08705 SM00507 HNH nucleases LT40_RS08785 SM00232 JAB/MPN domain LT40_RS08840 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS08840 SM00091 PAS domain LT40_RS08840 SM00387 Histidine kinase-like ATPases LT40_RS08840 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS08840 SM00448 cheY-homologous receiver domain LT40_RS08845 SM00448 cheY-homologous receiver domain LT40_RS08850 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS08860 SM00091 PAS domain LT40_RS08860 SM00387 Histidine kinase-like ATPases LT40_RS08860 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS08860 SM00448 cheY-homologous receiver domain LT40_RS08895 SM00869 Autotransporter beta-domain LT40_RS08900 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen LT40_RS08915 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS08915 SM00387 Histidine kinase-like ATPases LT40_RS08915 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS08915 SM00448 cheY-homologous receiver domain LT40_RS08920 SM00382 ATPases associated with a variety of cellular activities LT40_RS08935 SM00382 ATPases associated with a variety of cellular activities LT40_RS08970 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LT40_RS08975 SM01092 CO dehydrogenase flavoprotein C-terminal domain LT40_RS08980 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS08985 SM00968 SMC proteins Flexible Hinge Domain LT40_RS08990 SM00771 ZipA, C-terminal domain (FtsZ-binding) LT40_RS08995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LT40_RS08995 SM00292 breast cancer carboxy-terminal domain LT40_RS08995 SM00532 Ligase N family LT40_RS09010 SM00382 ATPases associated with a variety of cellular activities LT40_RS09030 SM00829 Enoylreductase LT40_RS09035 SM00493 LT40_RS09035 LT40_RS09075 SM00382 ATPases associated with a variety of cellular activities LT40_RS09175 SM00382 ATPases associated with a variety of cellular activities LT40_RS09210 SM00822 LT40_RS09210 LT40_RS09275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LT40_RS09285 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS09290 SM01321 LT40_RS09290 LT40_RS09385 SM00421 helix_turn_helix, Lux Regulon LT40_RS09385 SM00448 cheY-homologous receiver domain LT40_RS09415 SM00382 ATPases associated with a variety of cellular activities LT40_RS09435 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS09450 SM00448 cheY-homologous receiver domain LT40_RS09455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS09455 SM00387 Histidine kinase-like ATPases LT40_RS09455 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS09455 SM00448 cheY-homologous receiver domain LT40_RS09460 SM00138 Methyltransferase, chemotaxis proteins LT40_RS09470 SM00387 Histidine kinase-like ATPases LT40_RS09470 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS09470 SM00448 cheY-homologous receiver domain LT40_RS09475 SM00448 cheY-homologous receiver domain LT40_RS09480 SM00925 MltA specific insert domain LT40_RS09495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS09495 SM00387 Histidine kinase-like ATPases LT40_RS09495 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS09500 SM00287 Bacterial SH3 domain homologues LT40_RS09560 SM00769 Water Stress and Hypersensitive response LT40_RS09585 SM00052 Putative diguanylate phosphodiesterase LT40_RS09585 SM00267 diguanylate cyclase LT40_RS09600 SM00481 DNA polymerase alpha chain like domain LT40_RS09620 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS09635 SM00382 ATPases associated with a variety of cellular activities LT40_RS09680 SM00382 ATPases associated with a variety of cellular activities LT40_RS09705 SM00387 Histidine kinase-like ATPases LT40_RS09705 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS09710 SM00448 cheY-homologous receiver domain LT40_RS09710 SM00862 Transcriptional regulatory protein, C terminal LT40_RS09720 SM00095 Transthyretin LT40_RS09820 SM00382 ATPases associated with a variety of cellular activities LT40_RS09840 SM00354 helix_turn _helix lactose operon repressor LT40_RS09845 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS09850 SM00829 Enoylreductase LT40_RS09885 SM00354 helix_turn _helix lactose operon repressor LT40_RS09925 SM00382 ATPases associated with a variety of cellular activities LT40_RS09945 SM00919 Malic enzyme, NAD binding domain LT40_RS09945 SM01274 LT40_RS09945 LT40_RS09965 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS09965 SM00895 LT40_RS09965 LT40_RS09970 SM00912 haemagglutination activity domain LT40_RS10045 SM00382 ATPases associated with a variety of cellular activities LT40_RS10090 SM00387 Histidine kinase-like ATPases LT40_RS10090 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10090 SM00448 cheY-homologous receiver domain LT40_RS10095 SM00387 Histidine kinase-like ATPases LT40_RS10095 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10100 SM00331 Sigma factor PP2C-like phosphatases LT40_RS10125 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS10125 SM00895 LT40_RS10125 LT40_RS10135 SM00858 LT40_RS10135 LT40_RS10150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS10150 SM00387 Histidine kinase-like ATPases LT40_RS10150 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10150 SM00448 cheY-homologous receiver domain LT40_RS10155 SM00382 ATPases associated with a variety of cellular activities LT40_RS10185 SM00382 ATPases associated with a variety of cellular activities LT40_RS10190 SM00833 Cobalamin synthesis protein cobW C-terminal domain LT40_RS10200 SM00382 ATPases associated with a variety of cellular activities LT40_RS10210 SM00382 ATPases associated with a variety of cellular activities LT40_RS10265 SM01018 B12 binding domain LT40_RS10280 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10315 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10360 SM00344 helix_turn_helix ASNC type LT40_RS10385 SM00822 LT40_RS10385 LT40_RS10395 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10405 SM00382 ATPases associated with a variety of cellular activities LT40_RS10410 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS10420 SM00344 helix_turn_helix ASNC type LT40_RS10435 SM00382 ATPases associated with a variety of cellular activities LT40_RS10460 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS10460 SM00866 LT40_RS10460 LT40_RS10465 SM00974 LT40_RS10465 LT40_RS10480 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS10495 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10515 SM01217 LT40_RS10515 LT40_RS10530 SM00849 Metallo-beta-lactamase superfamily LT40_RS10555 SM00382 ATPases associated with a variety of cellular activities LT40_RS10575 SM00354 helix_turn _helix lactose operon repressor LT40_RS10605 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10635 SM00382 ATPases associated with a variety of cellular activities LT40_RS10650 SM00382 ATPases associated with a variety of cellular activities LT40_RS10680 SM00953 LT40_RS10680 LT40_RS10690 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS10690 SM00387 Histidine kinase-like ATPases LT40_RS10690 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10690 SM00448 cheY-homologous receiver domain LT40_RS10730 SM00861 Transketolase, pyrimidine binding domain LT40_RS10770 SM00267 diguanylate cyclase LT40_RS10815 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS10830 SM00382 ATPases associated with a variety of cellular activities LT40_RS10835 SM00052 Putative diguanylate phosphodiesterase LT40_RS10840 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS10840 SM00091 PAS domain LT40_RS10840 SM00387 Histidine kinase-like ATPases LT40_RS10840 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10840 SM00448 cheY-homologous receiver domain LT40_RS10845 SM00421 helix_turn_helix, Lux Regulon LT40_RS10845 SM00448 cheY-homologous receiver domain LT40_RS10885 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS10885 SM00091 PAS domain LT40_RS10885 SM00387 Histidine kinase-like ATPases LT40_RS10885 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10885 SM00448 cheY-homologous receiver domain LT40_RS10890 SM00448 cheY-homologous receiver domain LT40_RS10895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS10895 SM00387 Histidine kinase-like ATPases LT40_RS10895 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS10915 SM00052 Putative diguanylate phosphodiesterase LT40_RS10915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS10915 SM00267 diguanylate cyclase LT40_RS10920 SM00052 Putative diguanylate phosphodiesterase LT40_RS10920 SM00267 diguanylate cyclase LT40_RS10965 SM00052 Putative diguanylate phosphodiesterase LT40_RS10965 SM00267 diguanylate cyclase LT40_RS10995 SM01004 Delta-aminolevulinic acid dehydratase LT40_RS11000 SM00861 Transketolase, pyrimidine binding domain LT40_RS11030 SM01350 LT40_RS11030 LT40_RS11040 SM00642 Alpha-amylase domain LT40_RS11050 SM00642 Alpha-amylase domain LT40_RS11060 SM00642 Alpha-amylase domain LT40_RS11080 SM00642 Alpha-amylase domain LT40_RS11085 SM00642 Alpha-amylase domain LT40_RS11090 SM00642 Alpha-amylase domain LT40_RS11095 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS11135 SM00882 Coenzyme A transferase LT40_RS11190 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS11190 SM00895 LT40_RS11190 LT40_RS11235 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS11265 SM00382 ATPases associated with a variety of cellular activities LT40_RS11275 SM00843 LT40_RS11275 LT40_RS11290 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS11305 SM00357 Cold shock protein domain LT40_RS11335 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LT40_RS11375 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LT40_RS11380 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LT40_RS11380 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT40_RS11420 SM00491 LT40_RS11420 LT40_RS11425 SM00990 LT40_RS11425 LT40_RS11430 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS11440 SM00829 Enoylreductase LT40_RS11485 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS11490 SM00822 LT40_RS11490 LT40_RS11495 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS11520 SM00155 Phospholipase D. Active site motifs. LT40_RS11530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS11530 SM00091 PAS domain LT40_RS11530 SM00387 Histidine kinase-like ATPases LT40_RS11530 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS11530 SM00448 cheY-homologous receiver domain LT40_RS11610 SM00903 Flavin reductase like domain LT40_RS11615 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS11615 SM00895 LT40_RS11615 LT40_RS11650 SM00382 ATPases associated with a variety of cellular activities LT40_RS11660 SM00903 Flavin reductase like domain LT40_RS11690 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS11705 SM00858 LT40_RS11705 LT40_RS11735 SM00347 helix_turn_helix multiple antibiotic resistance protein LT40_RS11810 SM00382 ATPases associated with a variety of cellular activities LT40_RS11820 SM00382 ATPases associated with a variety of cellular activities LT40_RS11840 SM01321 LT40_RS11840 LT40_RS11845 SM00382 ATPases associated with a variety of cellular activities LT40_RS11850 SM00382 ATPases associated with a variety of cellular activities LT40_RS11940 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS11960 SM00052 Putative diguanylate phosphodiesterase LT40_RS11960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS11960 SM00267 diguanylate cyclase LT40_RS11970 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS11975 SM00382 ATPases associated with a variety of cellular activities LT40_RS12060 SM00331 Sigma factor PP2C-like phosphatases LT40_RS12060 SM00448 cheY-homologous receiver domain LT40_RS12090 SM00382 ATPases associated with a variety of cellular activities LT40_RS12130 SM00344 helix_turn_helix ASNC type LT40_RS12140 SM00486 DNA polymerase type-B family LT40_RS12145 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LT40_RS12145 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LT40_RS12145 SM00493 LT40_RS12145 LT40_RS12195 SM00267 diguanylate cyclase LT40_RS12220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LT40_RS12220 SM00465 GIY-YIG type nucleases (URI domain) LT40_RS12225 SM00421 helix_turn_helix, Lux Regulon LT40_RS12225 SM00448 cheY-homologous receiver domain LT40_RS12230 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS12250 SM00052 Putative diguanylate phosphodiesterase LT40_RS12260 SM01091 Transporter associated domain LT40_RS12350 SM00448 cheY-homologous receiver domain LT40_RS12355 SM00072 Guanylate kinase homologues. LT40_RS12355 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain LT40_RS12365 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS12375 SM00382 ATPases associated with a variety of cellular activities LT40_RS12445 SM00267 diguanylate cyclase LT40_RS12455 SM00267 diguanylate cyclase LT40_RS12460 SM00642 Alpha-amylase domain LT40_RS12465 SM00448 cheY-homologous receiver domain LT40_RS12470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS12470 SM00091 PAS domain LT40_RS12475 SM00235 Zinc-dependent metalloprotease LT40_RS12505 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LT40_RS12510 SM01092 CO dehydrogenase flavoprotein C-terminal domain LT40_RS12520 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS12560 SM00881 CoA binding domain LT40_RS12580 SM00861 Transketolase, pyrimidine binding domain LT40_RS12625 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS12640 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS12645 SM00893 Electron transfer flavoprotein domain LT40_RS12650 SM00893 Electron transfer flavoprotein domain LT40_RS12675 SM00387 Histidine kinase-like ATPases LT40_RS12680 SM00448 cheY-homologous receiver domain LT40_RS12680 SM00862 Transcriptional regulatory protein, C terminal LT40_RS12810 SM00091 PAS domain LT40_RS12810 SM00387 Histidine kinase-like ATPases LT40_RS12810 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS12815 SM00382 ATPases associated with a variety of cellular activities LT40_RS12815 SM00448 cheY-homologous receiver domain LT40_RS12860 SM00749 bacterial OsmY and nodulation domain LT40_RS12865 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS12865 SM00322 K homology RNA-binding domain LT40_RS12870 SM01387 LT40_RS12870 LT40_RS12890 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS12930 SM00382 ATPases associated with a variety of cellular activities LT40_RS12940 SM01103 LT40_RS12940 LT40_RS12955 SM00851 MGS-like domain LT40_RS12955 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LT40_RS12960 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LT40_RS12970 SM00271 DnaJ molecular chaperone homology domain LT40_RS13015 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS13015 SM00895 LT40_RS13015 LT40_RS13045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS13050 SM00091 PAS domain LT40_RS13050 SM00387 Histidine kinase-like ATPases LT40_RS13050 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS13050 SM00448 cheY-homologous receiver domain LT40_RS13075 SM00382 ATPases associated with a variety of cellular activities LT40_RS13090 SM00382 ATPases associated with a variety of cellular activities LT40_RS13095 SM00382 ATPases associated with a variety of cellular activities LT40_RS13120 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS13135 SM00091 PAS domain LT40_RS13135 SM00267 diguanylate cyclase LT40_RS13140 SM00448 cheY-homologous receiver domain LT40_RS13150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS13150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS13150 SM01358 LT40_RS13150 LT40_RS13295 SM00382 ATPases associated with a variety of cellular activities LT40_RS13305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS13330 SM00422 helix_turn_helix, mercury resistance LT40_RS13335 SM00090 RIO-like kinase LT40_RS13340 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS13355 SM00822 LT40_RS13355 LT40_RS13400 SM01359 LT40_RS13400 LT40_RS13400 SM01360 LT40_RS13400 LT40_RS13435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS13450 SM00878 Biotin carboxylase C-terminal domain LT40_RS13475 SM00798 AICARFT/IMPCHase bienzyme LT40_RS13475 SM00851 MGS-like domain LT40_RS13480 SM01209 LT40_RS13480 LT40_RS13480 SM01210 LT40_RS13480 LT40_RS13485 SM00387 Histidine kinase-like ATPases LT40_RS13485 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS13485 SM00448 cheY-homologous receiver domain LT40_RS13560 SM00382 ATPases associated with a variety of cellular activities LT40_RS13595 SM00271 DnaJ molecular chaperone homology domain LT40_RS13635 SM00988 UreE urease accessory protein, N-terminal domain LT40_RS13660 SM00822 LT40_RS13660 LT40_RS13665 SM00382 ATPases associated with a variety of cellular activities LT40_RS13670 SM00382 ATPases associated with a variety of cellular activities LT40_RS13700 SM00460 Transglutaminase/protease-like homologues LT40_RS13710 SM00460 Transglutaminase/protease-like homologues LT40_RS13720 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS13750 SM00967 RNA 2'-O ribose methyltransferase substrate binding LT40_RS13755 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS13755 SM00357 Cold shock protein domain LT40_RS13755 SM00955 LT40_RS13755 LT40_RS13780 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS13780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS13785 SM00788 Adenylosuccinate synthetase LT40_RS13795 SM00244 prohibitin homologues LT40_RS13800 SM00244 prohibitin homologues LT40_RS13820 SM00853 MutL C terminal dimerisation domain LT40_RS13820 SM01340 LT40_RS13820 LT40_RS13825 SM00257 Lysin motif LT40_RS13825 SM00646 LT40_RS13825 LT40_RS13875 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS13880 SM00479 LT40_RS13880 LT40_RS13920 SM00450 Rhodanese Homology Domain LT40_RS13950 SM00434 DNA Topoisomerase IV LT40_RS13965 SM00387 Histidine kinase-like ATPases LT40_RS13965 SM00433 TopoisomeraseII LT40_RS14030 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS14030 SM00876 Biotin and Thiamin Synthesis associated domain LT40_RS14060 SM00354 helix_turn _helix lactose operon repressor LT40_RS14080 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS14100 SM00448 cheY-homologous receiver domain LT40_RS14105 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS14110 SM00479 LT40_RS14110 LT40_RS14115 SM00382 ATPases associated with a variety of cellular activities LT40_RS14135 SM00563 Phosphate acyltransferases LT40_RS14215 SM00965 Secretin and TonB N terminus short domain LT40_RS14235 SM00842 Cell division protein FtsA LT40_RS14250 SM00919 Malic enzyme, NAD binding domain LT40_RS14250 SM01274 LT40_RS14250 LT40_RS14255 SM00318 Staphylococcal nuclease homologues LT40_RS14265 SM00487 DEAD-like helicases superfamily LT40_RS14265 SM00490 helicase superfamily c-terminal domain LT40_RS14270 SM00836 DALR anticodon binding domain LT40_RS14270 SM01016 Arginyl tRNA synthetase N terminal dom LT40_RS14285 SM00382 ATPases associated with a variety of cellular activities LT40_RS14285 SM01086 C-terminal, D2-small domain, of ClpB protein LT40_RS14345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS14345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS14345 SM01358 LT40_RS14345 LT40_RS14350 SM00382 ATPases associated with a variety of cellular activities LT40_RS14360 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS14360 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LT40_RS14390 SM00382 ATPases associated with a variety of cellular activities LT40_RS14405 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS14405 SM00866 LT40_RS14405 LT40_RS14430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS14440 SM00981 LT40_RS14440 LT40_RS14445 SM01230 LT40_RS14445 LT40_RS14460 SM00091 PAS domain LT40_RS14460 SM00387 Histidine kinase-like ATPases LT40_RS14460 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS14465 SM00382 ATPases associated with a variety of cellular activities LT40_RS14465 SM00448 cheY-homologous receiver domain LT40_RS14490 SM00450 Rhodanese Homology Domain LT40_RS14505 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LT40_RS14505 SM00245 tail specific protease LT40_RS14520 SM00260 Two component signalling adaptor domain LT40_RS14525 SM00073 Histidine Phosphotransfer domain LT40_RS14525 SM00260 Two component signalling adaptor domain LT40_RS14525 SM00387 Histidine kinase-like ATPases LT40_RS14525 SM00448 cheY-homologous receiver domain LT40_RS14525 SM01231 LT40_RS14525 LT40_RS14530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS14535 SM00260 Two component signalling adaptor domain LT40_RS14540 SM00448 cheY-homologous receiver domain LT40_RS14545 SM00448 cheY-homologous receiver domain LT40_RS14565 SM00732 Likely ribonuclease with RNase H fold. LT40_RS14595 SM00382 ATPases associated with a variety of cellular activities LT40_RS14630 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS14675 SM00382 ATPases associated with a variety of cellular activities LT40_RS14680 SM00382 ATPases associated with a variety of cellular activities LT40_RS14680 SM00962 SRP54-type protein, GTPase domain LT40_RS14680 SM00963 SRP54-type protein, helical bundle domain LT40_RS14705 SM00450 Rhodanese Homology Domain LT40_RS14725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LT40_RS14725 SM01232 LT40_RS14725 LT40_RS14765 SM00422 helix_turn_helix, mercury resistance LT40_RS14770 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS14815 SM00996 S-adenosyl-L-homocysteine hydrolase LT40_RS14815 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LT40_RS14830 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS14835 SM00487 DEAD-like helicases superfamily LT40_RS14835 SM00490 helicase superfamily c-terminal domain LT40_RS14840 SM00867 YceI-like domain LT40_RS14905 SM00478 endonuclease III LT40_RS14935 SM00382 ATPases associated with a variety of cellular activities LT40_RS14940 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS15050 SM00965 Secretin and TonB N terminus short domain LT40_RS15085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS15085 SM00897 FIST N domain LT40_RS15085 SM01204 LT40_RS15085 LT40_RS15115 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS15120 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS15130 SM00382 ATPases associated with a variety of cellular activities LT40_RS15150 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS15185 SM00382 ATPases associated with a variety of cellular activities LT40_RS15200 SM00344 helix_turn_helix ASNC type LT40_RS15245 SM01329 LT40_RS15245 LT40_RS15255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS15305 SM00382 ATPases associated with a variety of cellular activities LT40_RS15305 SM00930 LT40_RS15305 LT40_RS15335 SM00382 ATPases associated with a variety of cellular activities LT40_RS15345 SM00382 ATPases associated with a variety of cellular activities LT40_RS15370 SM00052 Putative diguanylate phosphodiesterase LT40_RS15370 SM00091 PAS domain LT40_RS15370 SM00267 diguanylate cyclase LT40_RS15380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS15380 SM00091 PAS domain LT40_RS15380 SM00267 diguanylate cyclase LT40_RS15405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS15405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS15405 SM01358 LT40_RS15405 LT40_RS15430 SM00912 haemagglutination activity domain LT40_RS15450 SM00829 Enoylreductase LT40_RS15475 SM00347 helix_turn_helix multiple antibiotic resistance protein LT40_RS15485 SM00382 ATPases associated with a variety of cellular activities LT40_RS15490 SM00327 von Willebrand factor (vWF) type A domain LT40_RS15500 SM00052 Putative diguanylate phosphodiesterase LT40_RS15500 SM00267 diguanylate cyclase LT40_RS15500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS15510 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS15510 SM00895 LT40_RS15510 LT40_RS15560 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LT40_RS15560 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LT40_RS15650 SM00749 bacterial OsmY and nodulation domain LT40_RS15655 SM00382 ATPases associated with a variety of cellular activities LT40_RS15655 SM00448 cheY-homologous receiver domain LT40_RS15660 SM00091 PAS domain LT40_RS15660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS15660 SM00387 Histidine kinase-like ATPases LT40_RS15660 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS15665 SM00052 Putative diguanylate phosphodiesterase LT40_RS15670 SM00644 LT40_RS15670 LT40_RS15675 SM00267 diguanylate cyclase LT40_RS15695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LT40_RS15695 SM00474 3'-5' exonuclease LT40_RS15695 SM00475 5'-3' exonuclease LT40_RS15695 SM00482 DNA polymerase A domain LT40_RS15720 SM00382 ATPases associated with a variety of cellular activities LT40_RS15735 SM01060 LT40_RS15735 LT40_RS15740 SM00382 ATPases associated with a variety of cellular activities LT40_RS15740 SM00930 LT40_RS15740 LT40_RS15770 SM00947 Carbonic anhydrase LT40_RS15775 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LT40_RS15785 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS15785 SM00895 LT40_RS15785 LT40_RS15940 SM00829 Enoylreductase LT40_RS15955 SM00257 Lysin motif LT40_RS16005 SM00563 Phosphate acyltransferases LT40_RS16030 SM00387 Histidine kinase-like ATPases LT40_RS16030 SM00433 TopoisomeraseII LT40_RS16040 SM00480 DNA polymerase III beta subunit LT40_RS16045 SM00382 ATPases associated with a variety of cellular activities LT40_RS16045 SM00760 Bacterial dnaA protein helix-turn-helix domain LT40_RS16070 SM01228 LT40_RS16070 LT40_RS16085 SM00470 ParB-like nuclease domain LT40_RS16125 SM00382 ATPases associated with a variety of cellular activities LT40_RS16140 SM00420 helix_turn_helix, Deoxyribose operon repressor LT40_RS16140 SM01134 LT40_RS16140 LT40_RS16155 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS16160 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS16160 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LT40_RS16170 SM00382 ATPases associated with a variety of cellular activities LT40_RS16195 SM00155 Phospholipase D. Active site motifs. LT40_RS16205 SM00833 Cobalamin synthesis protein cobW C-terminal domain LT40_RS16245 SM00978 LT40_RS16245 LT40_RS16275 SM00878 Biotin carboxylase C-terminal domain LT40_RS16300 SM00870 LT40_RS16300 LT40_RS16320 SM01001 AIR carboxylase LT40_RS16370 SM00382 ATPases associated with a variety of cellular activities LT40_RS16380 SM00448 cheY-homologous receiver domain LT40_RS16390 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS16390 SM01091 Transporter associated domain LT40_RS16395 SM00091 PAS domain LT40_RS16395 SM00387 Histidine kinase-like ATPases LT40_RS16395 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS16400 SM00448 cheY-homologous receiver domain LT40_RS16400 SM00862 Transcriptional regulatory protein, C terminal LT40_RS16425 SM00411 bacterial (prokaryotic) histone like domain LT40_RS16440 SM00487 DEAD-like helicases superfamily LT40_RS16440 SM00490 helicase superfamily c-terminal domain LT40_RS16480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LT40_RS16480 SM00954 Region found in RelA / SpoT proteins LT40_RS16485 SM01409 LT40_RS16485 LT40_RS16490 SM00072 Guanylate kinase homologues. LT40_RS16570 SM00155 Phospholipase D. Active site motifs. LT40_RS16575 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS16595 SM00344 helix_turn_helix ASNC type LT40_RS16605 SM01005 Alanine racemase, C-terminal domain LT40_RS16610 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS16635 SM00052 Putative diguanylate phosphodiesterase LT40_RS16635 SM00267 diguanylate cyclase LT40_RS16645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS16645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS16650 SM01150 LT40_RS16650 LT40_RS16670 SM00382 ATPases associated with a variety of cellular activities LT40_RS16690 SM00938 Nitrogen regulatory protein P-II LT40_RS16740 SM01219 LT40_RS16740 LT40_RS16770 SM00448 cheY-homologous receiver domain LT40_RS16770 SM00850 LytTr DNA-binding domain LT40_RS16815 SM00382 ATPases associated with a variety of cellular activities LT40_RS16845 SM00382 ATPases associated with a variety of cellular activities LT40_RS16860 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS16870 SM00357 Cold shock protein domain LT40_RS16870 SM00382 ATPases associated with a variety of cellular activities LT40_RS16870 SM00959 Rho termination factor, N-terminal domain LT40_RS16930 SM01011 Aminopeptidase P, N-terminal domain LT40_RS16975 SM00382 ATPases associated with a variety of cellular activities LT40_RS16980 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS17000 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS17015 SM00382 ATPases associated with a variety of cellular activities LT40_RS17020 SM01230 LT40_RS17020 LT40_RS17025 SM01230 LT40_RS17025 LT40_RS17045 SM00382 ATPases associated with a variety of cellular activities LT40_RS17070 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. LT40_RS17100 SM00382 ATPases associated with a variety of cellular activities LT40_RS17110 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS17110 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LT40_RS17130 SM00382 ATPases associated with a variety of cellular activities LT40_RS17140 SM00344 helix_turn_helix ASNC type LT40_RS17145 SM01118 LT40_RS17145 LT40_RS17170 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS17170 SM00732 Likely ribonuclease with RNase H fold. LT40_RS17175 SM00448 cheY-homologous receiver domain LT40_RS17175 SM00862 Transcriptional regulatory protein, C terminal LT40_RS17180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS17180 SM00387 Histidine kinase-like ATPases LT40_RS17180 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS17195 SM00363 S4 RNA-binding domain LT40_RS17255 SM00382 ATPases associated with a variety of cellular activities LT40_RS17255 SM00448 cheY-homologous receiver domain LT40_RS17260 SM00387 Histidine kinase-like ATPases LT40_RS17260 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS17325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LT40_RS17330 SM00861 Transketolase, pyrimidine binding domain LT40_RS17335 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT40_RS17365 SM00052 Putative diguanylate phosphodiesterase LT40_RS17365 SM00091 PAS domain LT40_RS17365 SM00267 diguanylate cyclase LT40_RS17365 SM00448 cheY-homologous receiver domain LT40_RS17395 SM00487 DEAD-like helicases superfamily LT40_RS17395 SM00490 helicase superfamily c-terminal domain LT40_RS17430 SM00382 ATPases associated with a variety of cellular activities LT40_RS17445 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS17485 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS17510 SM00989 LT40_RS17510 LT40_RS17525 SM00893 Electron transfer flavoprotein domain LT40_RS17530 SM00893 Electron transfer flavoprotein domain LT40_RS17570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS17570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS17625 SM01091 Transporter associated domain LT40_RS17650 SM00052 Putative diguanylate phosphodiesterase LT40_RS17650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS17650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS17650 SM00091 PAS domain LT40_RS17650 SM00267 diguanylate cyclase LT40_RS17735 SM00869 Autotransporter beta-domain LT40_RS17795 SM00382 ATPases associated with a variety of cellular activities LT40_RS17840 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS17905 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LT40_RS17920 SM00226 Low molecular weight phosphatase family LT40_RS17955 SM00344 helix_turn_helix ASNC type LT40_RS17965 SM00530 Helix-turn-helix XRE-family like proteins LT40_RS18005 SM00052 Putative diguanylate phosphodiesterase LT40_RS18005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS18005 SM00091 PAS domain LT40_RS18005 SM00267 diguanylate cyclase LT40_RS18015 SM00400 zinc finger LT40_RS18015 SM00493 LT40_RS18015 LT40_RS18015 SM00766 DNA primase DnaG DnaB-binding LT40_RS18030 SM01207 LT40_RS18030 LT40_RS18035 SM00905 Dihydroneopterin aldolase LT40_RS18045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LT40_RS18060 SM00763 PrkA AAA domain LT40_RS18065 SM00450 Rhodanese Homology Domain LT40_RS18080 SM00650 Ribosomal RNA adenine dimethylases LT40_RS18110 SM00271 DnaJ molecular chaperone homology domain LT40_RS18120 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS18120 SM00387 Histidine kinase-like ATPases LT40_RS18125 SM00421 helix_turn_helix, Lux Regulon LT40_RS18125 SM00448 cheY-homologous receiver domain LT40_RS18130 SM00382 ATPases associated with a variety of cellular activities LT40_RS18185 SM00100 Cyclic nucleotide-monophosphate binding domain LT40_RS18185 SM00419 helix_turn_helix, cAMP Regulatory protein LT40_RS18205 SM00822 LT40_RS18205 LT40_RS18215 SM00859 Semialdehyde dehydrogenase, NAD binding domain LT40_RS18295 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LT40_RS18295 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LT40_RS18300 SM00649 Ribosomal protein L11/L12 LT40_RS18325 SM00663 RNA polymerase I subunit A N-terminus LT40_RS18340 SM00838 Elongation factor G C-terminus LT40_RS18340 SM00889 Elongation factor G, domain IV LT40_RS18350 SM01403 LT40_RS18350 LT40_RS18370 SM01382 LT40_RS18370 LT40_RS18370 SM01383 LT40_RS18370 LT40_RS18385 SM00322 K homology RNA-binding domain LT40_RS18405 SM01374 LT40_RS18405 LT40_RS18410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LT40_RS18470 SM00363 S4 RNA-binding domain LT40_RS18470 SM01390 LT40_RS18470 LT40_RS18475 SM00662 RNA polymerases D LT40_RS18485 SM01060 LT40_RS18485 LT40_RS18540 SM00382 ATPases associated with a variety of cellular activities LT40_RS18615 SM00861 Transketolase, pyrimidine binding domain LT40_RS18630 SM00829 Enoylreductase LT40_RS18685 SM00382 ATPases associated with a variety of cellular activities LT40_RS18700 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS18705 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS18715 SM01007 Class II Aldolase and Adducin N-terminal domain LT40_RS18755 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. LT40_RS18770 SM00464 Found in ATP-dependent protease La (LON) LT40_RS18775 SM00014 Acid phosphatase homologues LT40_RS18825 SM00936 Penicillin-binding protein 5, C-terminal domain LT40_RS18840 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS18885 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS18885 SM01091 Transporter associated domain LT40_RS18900 SM00729 Elongator protein 3, MiaB family, Radical SAM LT40_RS18910 SM00671 Sel1-like repeats. LT40_RS18930 SM00387 Histidine kinase-like ATPases LT40_RS18930 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS18930 SM00448 cheY-homologous receiver domain LT40_RS18945 SM00344 helix_turn_helix ASNC type LT40_RS18970 SM00487 DEAD-like helicases superfamily LT40_RS18970 SM00490 helicase superfamily c-terminal domain LT40_RS18970 SM00847 Helicase associated domain (HA2) Add an annotation LT40_RS18980 SM00382 ATPases associated with a variety of cellular activities LT40_RS19040 SM00822 LT40_RS19040 LT40_RS19055 SM00382 ATPases associated with a variety of cellular activities LT40_RS19090 SM00903 Flavin reductase like domain LT40_RS19110 SM00479 LT40_RS19110 LT40_RS19120 SM00487 DEAD-like helicases superfamily LT40_RS19120 SM00490 helicase superfamily c-terminal domain LT40_RS19135 SM00878 Biotin carboxylase C-terminal domain LT40_RS19140 SM00796 Allophanate hydrolase subunit 1 LT40_RS19140 SM00797 Allophanate hydrolase subunit 2 LT40_RS19160 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS19160 SM00895 LT40_RS19160 LT40_RS19205 SM00346 helix_turn_helix isocitrate lyase regulation LT40_RS19255 SM01092 CO dehydrogenase flavoprotein C-terminal domain LT40_RS19260 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LT40_RS19310 SM00382 ATPases associated with a variety of cellular activities LT40_RS19340 SM00833 Cobalamin synthesis protein cobW C-terminal domain LT40_RS19350 SM00052 Putative diguanylate phosphodiesterase LT40_RS19350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS19350 SM00091 PAS domain LT40_RS19350 SM00267 diguanylate cyclase LT40_RS19355 SM00382 ATPases associated with a variety of cellular activities LT40_RS19425 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LT40_RS19445 SM00904 Riboflavin kinase LT40_RS19510 SM00382 ATPases associated with a variety of cellular activities LT40_RS19510 SM00448 cheY-homologous receiver domain LT40_RS19515 SM00387 Histidine kinase-like ATPases LT40_RS19515 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS19540 SM00382 ATPases associated with a variety of cellular activities LT40_RS19540 SM01086 C-terminal, D2-small domain, of ClpB protein LT40_RS19655 SM00052 Putative diguanylate phosphodiesterase LT40_RS19690 SM00644 LT40_RS19690 LT40_RS19720 SM00354 helix_turn _helix lactose operon repressor LT40_RS19750 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. LT40_RS19755 SM00671 Sel1-like repeats. LT40_RS19775 SM00052 Putative diguanylate phosphodiesterase LT40_RS19775 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS19775 SM00091 PAS domain LT40_RS19775 SM00267 diguanylate cyclase LT40_RS19805 SM01400 LT40_RS19805 LT40_RS19825 SM00028 Tetratricopeptide repeats LT40_RS19835 SM00937 LT40_RS19835 LT40_RS19865 SM00422 helix_turn_helix, mercury resistance LT40_RS19995 SM00563 Phosphate acyltransferases LT40_RS20060 SM00905 Dihydroneopterin aldolase LT40_RS20075 SM00422 helix_turn_helix, mercury resistance LT40_RS20085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS20085 SM00091 PAS domain LT40_RS20115 SM00965 Secretin and TonB N terminus short domain LT40_RS20145 SM00342 helix_turn_helix, arabinose operon control protein LT40_RS20205 SM00116 Domain in cystathionine beta-synthase and other proteins. LT40_RS20205 SM01240 LT40_RS20205 LT40_RS20265 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS20270 SM01211 LT40_RS20270 LT40_RS20285 SM00912 haemagglutination activity domain LT40_RS20290 SM00912 haemagglutination activity domain LT40_RS20330 SM01091 Transporter associated domain LT40_RS20340 SM00382 ATPases associated with a variety of cellular activities LT40_RS20340 SM00962 SRP54-type protein, GTPase domain LT40_RS20340 SM00963 SRP54-type protein, helical bundle domain LT40_RS20385 SM00062 Bacterial periplasmic substrate-binding proteins LT40_RS20385 SM00091 PAS domain LT40_RS20385 SM00387 Histidine kinase-like ATPases LT40_RS20385 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS20385 SM00448 cheY-homologous receiver domain LT40_RS20395 SM00421 helix_turn_helix, Lux Regulon LT40_RS20395 SM00448 cheY-homologous receiver domain LT40_RS20410 SM01322 LT40_RS20410 LT40_RS20435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS20435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS20440 SM00260 Two component signalling adaptor domain LT40_RS20445 SM00138 Methyltransferase, chemotaxis proteins LT40_RS20450 SM00260 Two component signalling adaptor domain LT40_RS20455 SM00073 Histidine Phosphotransfer domain LT40_RS20455 SM00260 Two component signalling adaptor domain LT40_RS20455 SM00387 Histidine kinase-like ATPases LT40_RS20455 SM00448 cheY-homologous receiver domain LT40_RS20460 SM00448 cheY-homologous receiver domain LT40_RS20465 SM00267 diguanylate cyclase LT40_RS20465 SM00448 cheY-homologous receiver domain LT40_RS20475 SM00937 LT40_RS20475 LT40_RS20490 SM01154 LT40_RS20490 LT40_RS20510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LT40_RS20510 SM00091 PAS domain LT40_RS20510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LT40_RS20580 SM00563 Phosphate acyltransferases LT40_RS20655 SM00382 ATPases associated with a variety of cellular activities LT40_RS20680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LT40_RS20680 SM00387 Histidine kinase-like ATPases LT40_RS20680 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS20685 SM00448 cheY-homologous receiver domain LT40_RS20685 SM00862 Transcriptional regulatory protein, C terminal LT40_RS20715 SM00345 helix_turn_helix gluconate operon transcriptional repressor LT40_RS20715 SM00895 LT40_RS20715 LT40_RS20735 SM00316 Ribosomal protein S1-like RNA-binding domain LT40_RS20775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS20775 SM00387 Histidine kinase-like ATPases LT40_RS20775 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS20780 SM00052 Putative diguanylate phosphodiesterase LT40_RS20780 SM00267 diguanylate cyclase LT40_RS20820 SM00870 LT40_RS20820 LT40_RS20835 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LT40_RS20835 SM00387 Histidine kinase-like ATPases LT40_RS20835 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS20880 SM00387 Histidine kinase-like ATPases LT40_RS20880 SM00388 His Kinase A (phosphoacceptor) domain LT40_RS20880 SM00448 cheY-homologous receiver domain LT40_RS20885 SM00862 Transcriptional regulatory protein, C terminal LT40_RS20970 SM00507 HNH nucleases LT40_RS20980 SM00869 Autotransporter beta-domain